Miyakogusa Predicted Gene

Lj2g3v0856440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0856440.1 Non Chatacterized Hit- tr|D8SSP9|D8SSP9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,25.94,2e-18,F-box-like,NULL; F-box domain,F-box domain,
cyclin-like; FBOX,F-box domain, cyclin-like; A Receptor
,NODE_18454_length_1724_cov_23.187935.path2.1
         (410 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33160.1 | Symbols:  | F-box family protein | chr4:15994160-1...   412   e-115
AT1G27340.1 | Symbols:  | Galactose oxidase/kelch repeat superfa...    94   1e-19
AT3G61590.2 | Symbols: HWS | Galactose oxidase/kelch repeat supe...    66   4e-11
AT3G61590.1 | Symbols: HWS, HS | Galactose oxidase/kelch repeat ...    66   4e-11
AT5G15710.1 | Symbols:  | Galactose oxidase/kelch repeat superfa...    66   4e-11
AT1G30950.1 | Symbols: UFO | F-box family protein | chr1:1103618...    52   1e-06

>AT4G33160.1 | Symbols:  | F-box family protein |
           chr4:15994160-15995533 FORWARD LENGTH=457
          Length = 457

 Score =  412 bits (1058), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/420 (52%), Positives = 287/420 (68%), Gaps = 16/420 (3%)

Query: 4   IGRSVSLKRKSPENGDNPLF--SNFSLDDLNEDLFERILSWLPTSTFFRGTSVCKRWKSV 61
           +G S   ++   E  D   F  S F +DDLN+D+ ER+LSWLPTS FFR +SVCKRWKS 
Sbjct: 41  MGFSTGKRKSRDEEEDRVSFFASEFPMDDLNDDVLERVLSWLPTSCFFRMSSVCKRWKSS 100

Query: 62  AASTSFKHACSQIPSREPWFLMVAPNLNQS-VIFDIAESSWKRLNHPPLLHEESNQSCMP 120
             S SFK ACSQIP+R+PWF M+  + N S  +FD  E+SWK LN    LH    Q  +P
Sbjct: 101 QTSKSFKLACSQIPTRDPWFFMIDNDSNSSSFVFDSTENSWKNLNRRDFLHHH-RQDFIP 159

Query: 121 VASSGGLICHR-KLSGDFIVSNPVTGSCSELPPLHISSQNQPLNAIVMRTASKDQLSFRI 179
           VASSGGL+C+R  +SGDF++ NP+TGS  ++P    ++ N+PL A+ M T +    S+ +
Sbjct: 160 VASSGGLLCYRCSISGDFLLRNPLTGSSRDIPS-QDNNNNKPLQAVAMTTTTVTPSSYTL 218

Query: 180 VLVFGELPNLVFKVYNSSSGCWENETALRRKVGDIDNSMEYD-STDENAVYFLSKGGIVV 238
           V + GE+PNL FK+Y S++  W  +  L   V + D+S+  D  TD   VYFLSK G VV
Sbjct: 219 VTISGEIPNLSFKIYESNADSWSKDQELE-SVKNNDSSLHDDYDTDSGTVYFLSKQGNVV 277

Query: 239 ASS--LQRSASKQYSSVVTNKDGNEIVYYLSSSGTVVACNLTRKCFFEHPRLLPVFSEYS 296
            +S  LQRS SKQYSSV+T  D  EIVY+LSS GT+VAC+LT++CF E P+LLP F EYS
Sbjct: 278 VASNNLQRSPSKQYSSVITVTDEAEIVYFLSSYGTIVACDLTKRCFTELPKLLPPFLEYS 337

Query: 297 IDVVECNGEMLIVLLSEFLETASLRVWKYDEG--WHQIAAMPVANSHEWFGKKADINCV- 353
           ID+VEC G M ++LLSEF E+ASLR+W+ D    W Q+  +P A SHE +GKK DINCV 
Sbjct: 338 IDLVECEGTMYVILLSEFFESASLRIWRLDNNREWVQVGMLPPALSHELYGKKGDINCVG 397

Query: 354 GAGNQIFVCLNS--PEI-CTYVLCDLETNKWVELPKCCLNGEVMDFMSAFSFEPRIEASV 410
           GAGN+I VC N+  PE+ C Y + DL   +W ELPKC  +GE +DF+SA SF+PRIEA+V
Sbjct: 398 GAGNKILVCFNASPPEVYCRYFVYDLVAEEWNELPKCFKDGEAVDFVSALSFQPRIEATV 457


>AT1G27340.1 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr1:9495741-9497857 FORWARD
           LENGTH=467
          Length = 467

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 175/389 (44%), Gaps = 51/389 (13%)

Query: 5   GRSVSLKRKSPENGDNPLFSNFSLDDLNEDLFERILSWLPTSTFFRGTSVCKRWKSVAAS 64
           G+S +   +   N D  ++  F      +DLFE ++S LP +TFF+  +VC++W ++  S
Sbjct: 99  GKSCTEVDEISGNMDQEIWQEFP-----QDLFEDVVSRLPMATFFQFRAVCRKWNALIDS 153

Query: 65  TSFKHACSQIPSREPWFLMVA-PNLNQSVIFDIAESSWKRLNHPPLLHEESNQSCMPVAS 123
            SF    +++P   PWF  +   N+N   ++D    S K+ +HP +         +P+AS
Sbjct: 154 DSFSRCFTELPQTIPWFYTITHENVNSGQVYD---PSLKKWHHPIIPALPKKSIVLPMAS 210

Query: 124 SGGLICHRKLSG-DFIVSNPVTGSCSELPPLHISSQNQPLNAIVMRTASKDQLSFRIVLV 182
           +GGL+C   +   +F VSNP+T S  ELP       ++    + +   S     ++++ V
Sbjct: 211 AGGLVCFLDIGHRNFYVSNPLTKSFRELPARSFKVWSRVAVGMTLNGNSTSH-GYKVLWV 269

Query: 183 FGELPNLVFKVYNSSSGCWENETALRRKVGDIDNSMEYDSTDENAVYFLSKGGIVVASSL 242
             E     ++VY+S S  W        K G I ++++        +       + + S+L
Sbjct: 270 GCEGE---YEVYDSLSNVWT-------KRGTIPSNIKLP-----VLLNFKSQPVAIHSTL 314

Query: 243 QRSASKQYSSVVTNKDGNEIVYYLSSSGTVVACNLTRKCFFEHPRLLPVFSEYSIDVVEC 302
                     ++T+ +G  I+ Y   SG        ++     P   P  S++++    C
Sbjct: 315 Y--------FMLTDPEG--ILSYDMVSGK------WKQFIIPGP---PDLSDHTL--AAC 353

Query: 303 NGEMLIVLLSEFLETASLRVWKYDEG---WHQIAAMPVANSHEWFGKKADINCVG-AGNQ 358
              +++V L        + +W+  +    W ++  MP     E++GK   +NC+G  G  
Sbjct: 354 GERLMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLEFYGKHIRMNCLGNKGCL 413

Query: 359 IFVCLNSPEICTYVLCDLETNKWVELPKC 387
           I + L S ++   +  +  T +W ++P C
Sbjct: 414 ILLSLRSRQMNRLITYNAVTREWTKVPGC 442


>AT3G61590.2 | Symbols: HWS | Galactose oxidase/kelch repeat
           superfamily protein | chr3:22792914-22794149 FORWARD
           LENGTH=411
          Length = 411

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 12/160 (7%)

Query: 16  ENGDNPLFSNFSLDDL-NEDLFERILSWLPTSTFFRGTSVCKRWKSVAASTSFK-HACSQ 73
           ++ D      FS+D L  +DL ERILS+LP ++ FR  +VCKRW  + +S  F  +  + 
Sbjct: 27  QSDDEAKVETFSMDSLLPDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNFSNN 86

Query: 74  IPSREPWFLMVAPNLNQS-VIFDIAESSWKRLNHPPLLHEESNQSCMPVASSGGLIC--H 130
             S+ PW+ M     + S   +D     W   + P +  E SN     VASS GL+C   
Sbjct: 87  SVSQRPWYFMFTTTDDPSGYAYDPIIRKWYSFDLPCI--ETSNWF---VASSCGLVCFMD 141

Query: 131 RKLSGDFIVSNPVTGSCSEL--PPLHISSQNQPLNAIVMR 168
                   VSNP+T     L  PP H S+    ++  V R
Sbjct: 142 NDCRNKIYVSNPITKQWRTLIEPPGHKSTDYTAMSTSVNR 181


>AT3G61590.1 | Symbols: HWS, HS | Galactose oxidase/kelch repeat
           superfamily protein | chr3:22792914-22794149 FORWARD
           LENGTH=411
          Length = 411

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 12/160 (7%)

Query: 16  ENGDNPLFSNFSLDDL-NEDLFERILSWLPTSTFFRGTSVCKRWKSVAASTSFK-HACSQ 73
           ++ D      FS+D L  +DL ERILS+LP ++ FR  +VCKRW  + +S  F  +  + 
Sbjct: 27  QSDDEAKVETFSMDSLLPDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNFSNN 86

Query: 74  IPSREPWFLMVAPNLNQS-VIFDIAESSWKRLNHPPLLHEESNQSCMPVASSGGLIC--H 130
             S+ PW+ M     + S   +D     W   + P +  E SN     VASS GL+C   
Sbjct: 87  SVSQRPWYFMFTTTDDPSGYAYDPIIRKWYSFDLPCI--ETSNWF---VASSCGLVCFMD 141

Query: 131 RKLSGDFIVSNPVTGSCSEL--PPLHISSQNQPLNAIVMR 168
                   VSNP+T     L  PP H S+    ++  V R
Sbjct: 142 NDCRNKIYVSNPITKQWRTLIEPPGHKSTDYTAMSTSVNR 181


>AT5G15710.1 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr5:5122791-5124137 FORWARD
           LENGTH=448
          Length = 448

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 159/401 (39%), Gaps = 81/401 (20%)

Query: 31  LNEDLFERILSWLPTSTFFRGTSVCKRWKSVAASTSFKHACSQIPSREPWFLMV---APN 87
           L EDL   IL+ +P    FR  SVCK+W  +    SF    S + S  P  L     +P 
Sbjct: 107 LPEDLLNEILARVPPFMIFRIRSVCKKWNLILQDNSFLKFHSNVSSHGPCLLTFWKNSPQ 166

Query: 88  LNQSVIFDIAESSWKRLNH---PPLLHEESNQSCMPVASSGGLICHRKLSG---DFIVSN 141
           + Q  +F +   +W ++     PP        +   V SSGGL+C   L G     +V N
Sbjct: 167 IPQCSVFSLPLKTWYKIPFTFLPPW-------AFWLVGSSGGLVCFSGLDGLTFRTLVCN 219

Query: 142 PVTGSCSELPPLHISSQNQPLNAIVMRTASKDQLSFRIVL---VFGELPNLVFKVYNSSS 198
           P+  S   LP +H + Q Q    ++M     D+ SF+++    ++G+  +L  +VY+S +
Sbjct: 220 PLMQSWRTLPSMHYNQQRQ----LIMVVDRSDK-SFKVIATSDIYGD-KSLPTEVYDSKT 273

Query: 199 GCWENETALRRKVGDIDNSMEYDSTDENAVYF--LSKGGIVVASSLQRSASKQYSSVVTN 256
             W     +   V    + M Y    ++ +Y   LS  G++    + R  S Q+  +   
Sbjct: 274 DKWSLHQIM-PAVNLCSSKMAY---CDSRLYLETLSPLGLM----MYRLDSGQWEHIPAK 325

Query: 257 KDGNEIVYYLSSSGTVVACNLTRKCFFEHPRLLPVFSEYSIDVVECNGEMLIVLLSEFLE 316
              + +  YL +         T+K  F                       L+  +  +  
Sbjct: 326 FPRSLLDGYLVAG--------TQKRLF-----------------------LVGRIGLYST 354

Query: 317 TASLRVWKYDE---GWHQIAAMPVANSHEWFGKKAD-INCVGAGNQIFVCLNSPEICTYV 372
             S+R+W+ D     W +I+ MP           A+   C G  N   +C  S      +
Sbjct: 355 LQSMRIWELDHTKVSWVEISRMPPKYFRALLRLSAERFECFGQDN--LICFTSWNQGKGL 412

Query: 373 LCDLETNKWVELPKCCL---NGEVMDFMSAFSFEPRIEASV 410
           L +++   W  +  C L   N +V        +EPR +ASV
Sbjct: 413 LYNVDKKIWSWISGCALQSCNSQVC------FYEPRFDASV 447


>AT1G30950.1 | Symbols: UFO | F-box family protein |
           chr1:11036180-11037508 FORWARD LENGTH=442
          Length = 442

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 93/428 (21%), Positives = 150/428 (35%), Gaps = 98/428 (22%)

Query: 31  LNEDLFERILSWLPTSTFFRGTSVCKRWKSVAASTSFKHACSQ-IPSREPWFLMVA---- 85
           L   L +R++++LP   FFR   VCKR+ S+  S +F     Q +P R   FL       
Sbjct: 50  LPPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYLQLLPLRHNCFLFFKHKTL 109

Query: 86  --------------PNLNQSVIFDIAESSWKRLNHPPLLHEESNQSCMPVASSGGLICHR 131
                          N  +  +FD  E  W RL+              P  SSGGL+   
Sbjct: 110 KSYIYKRGGTNDDDSNKAEGFLFDPNEIRWYRLS-----FAYIPSGFYPSGSSGGLVSWV 164

Query: 132 KLSGDF---IVSNPVTGSCSELPPLHISSQNQPLNAIVMRTASKDQLSFRIVLVFGELPN 188
                    ++ NP+ GS S+LPP+    +  P   + +   S D      V V G+   
Sbjct: 165 SEEAGLKTILLCNPLVGSVSQLPPIS-RPRLFPSIGLSVTPTSID------VTVAGDDLI 217

Query: 189 LVFKVYNSSSGCWENETALRRKVGDIDNSMEYDSTDENAVYFLSKGGIVVASSLQRSASK 248
             + V N SS                  S   D+    +++        + SSL R  S 
Sbjct: 218 SPYAVKNLSS-----------------ESFHVDAGGFFSLW-------AMTSSLPRLCSL 253

Query: 249 QYSSVV--------TNKDGNEIVYYLSSSGTVVACNLTRKCFFEHPRLLPVFSEYSIDVV 300
           +   +V         N     ++ Y  +    +      + F   P LL           
Sbjct: 254 ESGKMVYVQGKFYCMNYSPFSVLSYEVTGNRWIKIQAPMRRFLRSPSLL----------- 302

Query: 301 ECNGEMLIVLL---SEFLETASLRVWKYDEG---WHQIAAMPVANSHEWFGKKADINCVG 354
           E  G +++V     S+     SLR+W   +    W +I  MP     ++  ++       
Sbjct: 303 ESKGRLILVAAVEKSKLNVPKSLRLWSLQQDNATWVEIERMPQPLYTQFAAEEGGKGFEC 362

Query: 355 AGNQIFVCLNSPEICTYVLCDLETNKWVELPKC------------CLNGEVMDFMSAFSF 402
            GNQ FV +        +L D+    W+ +P C              +GEV+     F++
Sbjct: 363 VGNQEFVMIVLRGTSLQLLFDIVRKSWLWVPPCPYSGSGGGSSGGGSDGEVLQ---GFAY 419

Query: 403 EPRIEASV 410
           +P +   V
Sbjct: 420 DPVLTTPV 427