Miyakogusa Predicted Gene
- Lj2g3v0856430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0856430.1 Non Chatacterized Hit- tr|I1JU40|I1JU40_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,72.92,0,Cysteine
proteinases,NULL; UCH_2_3,Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2; SUBFAMILY,gene.g40119.t1.1
(503 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 424 e-119
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 424 e-119
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 416 e-116
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 304 8e-83
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 304 8e-83
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 274 1e-73
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 264 1e-70
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 172 5e-43
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 170 2e-42
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 134 2e-31
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 114 1e-25
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 108 8e-24
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 108 1e-23
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 105 1e-22
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 94 2e-19
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 94 2e-19
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 92 7e-19
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 92 7e-19
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 88 1e-17
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 87 2e-17
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 86 8e-17
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 86 8e-17
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 86 8e-17
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 84 2e-16
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 84 3e-16
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 79 6e-15
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 77 3e-14
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 75 1e-13
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 75 1e-13
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 75 1e-13
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 72 1e-12
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 71 2e-12
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 71 2e-12
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/337 (62%), Positives = 244/337 (72%), Gaps = 6/337 (1%)
Query: 1 MNILSRLPNISGTLDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQHI 60
MNI+SRLPNI G L GRQEDAHE MRFAID MQS+CL+EFGGEK VPP QETTLIQ+I
Sbjct: 69 MNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQYI 128
Query: 61 FGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNMYKCD 120
FGG LQS+V CT C S+QYENMMDLTVEIHGDA SLEECLDQFT KEWL GDN+YKCD
Sbjct: 129 FGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCD 188
Query: 121 GCKGYVKAWKRLTVKRAPNILTIALKRFQSGSFGKLNKRVTFPETLDLSPYTSDVGDGSD 180
C YVKA KRL+++ APNILTIALKRFQ G FGKLNKR++FPET DL PY S G+GSD
Sbjct: 189 RCDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSD 248
Query: 181 IYKLYAVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMGVELEEVLSQGAYMLLYS 240
+YKLYAV+VH+DMLNASFFGHYICY+KDF+GNWYRIDD +V VELE+VLSQ AYMLLYS
Sbjct: 249 VYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYS 308
Query: 241 RVNARPSGLQSIESSEAADMKTFEVGVQPGSSKQAECFSDTNTATYSKGCEALPFGISPE 300
RV RPS L+S ES + T S ++ +T+ S + PE
Sbjct: 309 RVQPRPSNLRSEESQDEKKTDTLNTESNQDGSVESSGVGTNDTSVSSLCNGIISHSEDPE 368
Query: 301 LKISASESVSLTEMSCGAKSEHSNDMDVEVANETSSS 337
+ +S S S+ SE ++DV+V S S
Sbjct: 369 YEKESSLSASV------PVSEEGKEVDVKVDTVDSES 399
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 424 bits (1089), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/337 (62%), Positives = 244/337 (72%), Gaps = 6/337 (1%)
Query: 1 MNILSRLPNISGTLDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQHI 60
MNI+SRLPNI G L GRQEDAHE MRFAID MQS+CL+EFGGEK VPP QETTLIQ+I
Sbjct: 239 MNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQYI 298
Query: 61 FGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNMYKCD 120
FGG LQS+V CT C S+QYENMMDLTVEIHGDA SLEECLDQFT KEWL GDN+YKCD
Sbjct: 299 FGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCD 358
Query: 121 GCKGYVKAWKRLTVKRAPNILTIALKRFQSGSFGKLNKRVTFPETLDLSPYTSDVGDGSD 180
C YVKA KRL+++ APNILTIALKRFQ G FGKLNKR++FPET DL PY S G+GSD
Sbjct: 359 RCDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSD 418
Query: 181 IYKLYAVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMGVELEEVLSQGAYMLLYS 240
+YKLYAV+VH+DMLNASFFGHYICY+KDF+GNWYRIDD +V VELE+VLSQ AYMLLYS
Sbjct: 419 VYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYS 478
Query: 241 RVNARPSGLQSIESSEAADMKTFEVGVQPGSSKQAECFSDTNTATYSKGCEALPFGISPE 300
RV RPS L+S ES + T S ++ +T+ S + PE
Sbjct: 479 RVQPRPSNLRSEESQDEKKTDTLNTESNQDGSVESSGVGTNDTSVSSLCNGIISHSEDPE 538
Query: 301 LKISASESVSLTEMSCGAKSEHSNDMDVEVANETSSS 337
+ +S S S+ SE ++DV+V S S
Sbjct: 539 YEKESSLSASV------PVSEEGKEVDVKVDTVDSES 569
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/261 (75%), Positives = 220/261 (84%), Gaps = 2/261 (0%)
Query: 1 MNILSRLPNISGTLDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQHI 60
MNI+SRL NI GTL GRQEDAHEFMR+AID MQS+CL+EFGGEK VPP QETTLIQ+I
Sbjct: 233 MNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIVPPRSQETTLIQYI 292
Query: 61 FGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNMYKCD 120
FGG LQS+V CT C S+QYENMMDL VE+HGDA SLEECLDQFT +EWLHGDNMYKCD
Sbjct: 293 FGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKCD 352
Query: 121 GCKGYVKAWKRLTVKRAPNILTIALKRFQSGSFGKLNKRVTFPETLDLSPYTSDVGDGSD 180
C YVKA KRLT++RAPNILTIALKR+Q G +GKLNKR++FPETLDL+PY S+ GDGSD
Sbjct: 353 RCSDYVKACKRLTIRRAPNILTIALKRYQGGRYGKLNKRISFPETLDLNPYMSEGGDGSD 412
Query: 181 IYKLYAVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMGVELEEVLSQGAYMLLYS 240
+YKLYAV+VH+DMLNASFFGHYICYIKDF GNWYRIDD ++ VELE+VLSQ AYMLLYS
Sbjct: 413 VYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYMLLYS 472
Query: 241 RVNARPSGLQSIESSEAADMK 261
R+ AR S S SE D K
Sbjct: 473 RIQARSSS--SCLRSEVKDEK 491
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 304 bits (779), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 137/244 (56%), Positives = 178/244 (72%)
Query: 3 ILSRLPNISGTLDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQHIFG 62
ILS + +I+ + G QEDAHEF+R + +MQSICLE GGE V P LQETTL+QH+FG
Sbjct: 505 ILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQHMFG 564
Query: 63 GHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNMYKCDGC 122
G L+S+V C C+ S +YEN+MDLT+EI+G SL++ L QFT E L G+NMY+C C
Sbjct: 565 GRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRC 624
Query: 123 KGYVKAWKRLTVKRAPNILTIALKRFQSGSFGKLNKRVTFPETLDLSPYTSDVGDGSDIY 182
GYV+A K L++ APNILTI LKRFQ G +GK+NK ++FPE LD+ P+ + GD +Y
Sbjct: 625 AGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLY 684
Query: 183 KLYAVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMGVELEEVLSQGAYMLLYSRV 242
LYAV+VH+D LNASF GHYI Y+KD +GNWYRIDD ++ V + +V+S+GAYML Y R
Sbjct: 685 MLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYMRS 744
Query: 243 NARP 246
RP
Sbjct: 745 YPRP 748
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 304 bits (779), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 137/244 (56%), Positives = 178/244 (72%)
Query: 3 ILSRLPNISGTLDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQHIFG 62
ILS + +I+ + G QEDAHEF+R + +MQSICLE GGE V P LQETTL+QH+FG
Sbjct: 509 ILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQHMFG 568
Query: 63 GHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNMYKCDGC 122
G L+S+V C C+ S +YEN+MDLT+EI+G SL++ L QFT E L G+NMY+C C
Sbjct: 569 GRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRC 628
Query: 123 KGYVKAWKRLTVKRAPNILTIALKRFQSGSFGKLNKRVTFPETLDLSPYTSDVGDGSDIY 182
GYV+A K L++ APNILTI LKRFQ G +GK+NK ++FPE LD+ P+ + GD +Y
Sbjct: 629 AGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLY 688
Query: 183 KLYAVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMGVELEEVLSQGAYMLLYSRV 242
LYAV+VH+D LNASF GHYI Y+KD +GNWYRIDD ++ V + +V+S+GAYML Y R
Sbjct: 689 MLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYMRS 748
Query: 243 NARP 246
RP
Sbjct: 749 YPRP 752
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/260 (48%), Positives = 180/260 (69%), Gaps = 1/260 (0%)
Query: 3 ILSRLPNISGTLDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQHIFG 62
+LS+L NI L G++EDAHEF+RF +DTMQS+C++ + L++TTLI FG
Sbjct: 609 LLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKLEDTTLIGLTFG 668
Query: 63 GHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNMYKCDGC 122
G+L+S++ C +C+ S E MMDLTVEI GD ++L++ L +FT E L G+N Y+C C
Sbjct: 669 GYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGENKYRCGSC 728
Query: 123 KGYVKAWKRLTVKRAPNILTIALKRFQSGSFGKLNKRVTFPETLDLSPYTSDVGDGSDIY 182
K Y +A K+L + PN+LTIALKRFQ+G FGKLNK + FPETLDL+PY S + S Y
Sbjct: 729 KSYERAKKKLKITEPPNVLTIALKRFQAGKFGKLNKLIRFPETLDLAPYVSGGSEKSHDY 788
Query: 183 KLYAVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMGVELEEVLSQGAYMLLYSRV 242
KLY V+VH+D++NA+F GHY+CYI++ Q WY+ DD V+ ++E +L++GAYML Y+R
Sbjct: 789 KLYGVIVHLDVMNAAFSGHYVCYIRN-QNKWYKADDSTVVTSDVERILTKGAYMLFYARC 847
Query: 243 NARPSGLQSIESSEAADMKT 262
P L +EA++ K+
Sbjct: 848 TPTPPRLAVCTKTEASNKKS 867
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/247 (53%), Positives = 167/247 (67%), Gaps = 4/247 (1%)
Query: 1 MNILSRLPNISGTLDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQHI 60
+ ILS+L I L G++EDAHEF+R A+DTMQS+ L+E A P +ETTL+
Sbjct: 394 IKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKE---APAAGPFAEETTLVGLT 450
Query: 61 FGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNMYKCD 120
FGG+L S++ C C S + E MMDLTVEI GD SLEE L QFT E L G+N Y C
Sbjct: 451 FGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVLDGENRYFCG 510
Query: 121 GCKGYVKAWKRLTVKRAPNILTIALKRFQSGSFGKLNKRVTFPETLDLSPYTSDVGDGSD 180
CK Y KA K+L + PNILT+ LKRFQS +FGKL+K + FPE LD+SPY SD G
Sbjct: 511 RCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHFPELLDISPYMSDPNHGDH 570
Query: 181 -IYKLYAVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMGVELEEVLSQGAYMLLY 239
+Y LYAVVVH+D ++ F GHY+CYIK G+W++IDD V V+LE VL +GAYMLLY
Sbjct: 571 PVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLETVLLEGAYMLLY 630
Query: 240 SRVNARP 246
+R + RP
Sbjct: 631 ARDSPRP 637
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 145/244 (59%), Gaps = 12/244 (4%)
Query: 17 GRQEDAHEFMRFAIDTMQSICLE----EFGGEKAVPPNLQETTLIQHIFGGHLQSEVICT 72
GRQEDAHEF+R+ ID + L + G + N ++++ IFGG LQS+V C
Sbjct: 112 GRQEDAHEFLRYVIDACHNTSLRLKKLRYNGNEPFNGN----SVVKEIFGGALQSQVKCL 167
Query: 73 ECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNMYKCDGCKGYVKAWKRL 132
C SN+ + +MD+++EI ++S++E L +F E L G+N Y+C+ C+ V A K++
Sbjct: 168 SCGAESNKADEIMDISLEIL-QSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARKQM 226
Query: 133 TVKRAPNILTIALKRFQSGSFGKLNKRVTFPETLDLSPYTSDVG-DGSDIYKLYAVVVHI 191
++ +APNIL I LKRF GK++K ++F E L LS + S D YKL+ ++VH
Sbjct: 227 SILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQPEYKLFGIIVHS 286
Query: 192 DMLNASFFGHYICYIKDFQGNWYRIDDWKVMGVELEEVLSQGAYMLLYSRVNARPSGLQS 251
S GHY Y+KD G WY +D V L+EVLS+ AY+L +SR N RP+ ++
Sbjct: 287 GFSPES--GHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSRSNQRPASAKT 344
Query: 252 IESS 255
+ +S
Sbjct: 345 LVTS 348
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 145/248 (58%), Gaps = 8/248 (3%)
Query: 2 NILSRLPNISGTLDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQHIF 61
+++S L IS RQEDAHE+M ++ M L G + + +L+ IF
Sbjct: 174 DLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLP--SGVPSESSDAYRRSLVHKIF 231
Query: 62 GGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWL-HGDNMYKCD 120
GG L+S+V C +C SN+++ +DL+++I A SL+ L +FT E L +G +Y+C+
Sbjct: 232 GGSLRSQVKCEQCSHCSNKFDPFLDLSLDI-SKADSLQRALSRFTAVELLDNGAKVYQCE 290
Query: 121 GCKGYVKAWKRLTVKRAPNILTIALKRFQSGSFGKLNKRVTFPETLDLSPYTSDVGDGSD 180
CK VKA K+LTV +AP +LT+ LKRF++ K++++V F +D+ P+ S +G+
Sbjct: 291 RCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAIDMKPFVSGPHEGNL 350
Query: 181 IYKLYAVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMGVELEEVLSQGAYMLLY- 239
Y LY V+VH +S GHY C+++ G WY +DD +V+ V + V +Q AYML Y
Sbjct: 351 KYTLYGVLVHYG--RSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFYV 408
Query: 240 -SRVNARP 246
R NA P
Sbjct: 409 RDRQNAVP 416
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 121/227 (53%), Gaps = 11/227 (4%)
Query: 19 QEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQHIFGGHLQSEVICTECEKNS 78
QEDAHEF++ +D ++ CL+ +V + Q+ ++ ++FGG L S + C C S
Sbjct: 249 QEDAHEFLQSFLDKLERCCLDPKNQLGSV--SSQDLNIVDNVFGGGLMSTLCCCNCNSVS 306
Query: 79 NQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAP 138
N +E + ++EI D +L + L+ FT E L ++ CD CK V K+L + P
Sbjct: 307 NTFEPSLGWSLEIE-DVNTLWKALESFTCVEKL--EDQLTCDNCKEKVTKEKQLRFDKLP 363
Query: 139 NILTIALKRFQSG--SFGKLNKRVTFPETLDLSPYTSDVGDG--SDIYKLYAVVVHIDML 194
+ T LKRF + + K+ + FP LDLSP+ S D S Y LYA V HI +
Sbjct: 364 PVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLYAFVEHIGI- 422
Query: 195 NASFFGHYICYIKDFQGNWYRIDDWKVMGVELEEVLSQGAYMLLYSR 241
+ FGHY Y++ W+ DD KV + E VLS+ AY+L Y+R
Sbjct: 423 -RATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFYAR 468
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 118/232 (50%), Gaps = 17/232 (7%)
Query: 18 RQEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQHIFGGHLQSEVICTECEKN 77
+QEDAHEF++ ++ ++ IC G ++ + + Q +F G L S + C C+
Sbjct: 261 QQEDAHEFLQAFLEKLE-IC----GSDRT---SFRGDITSQDVFSGRLISGLRCCNCDYV 312
Query: 78 SNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRA 137
S YE + L++EI D +L L+ FT E L D CD C V K+L + +
Sbjct: 313 SETYEKSVGLSLEIE-DVDTLGSALESFTRVEKL--DEQLTCDNCNEKVSKEKQLLLDKL 369
Query: 138 PNILTIALKRFQSGSF--GKLNKRVTFPETLDLSPYTSDVGDG--SDIYKLYAVVVHIDM 193
P + T LKRF++ K+ K V P +DL PY ++ + S Y LYA+V H
Sbjct: 370 PLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPYMRNIQENEVSTKYHLYALVEHFGY 429
Query: 194 LNASFFGHYICYIKDFQGNWYRIDDWKVMGVELEEVLSQGAYMLLYSRVNAR 245
A +GHY Y++ W+ DD KV ++ + VLSQ +Y+L Y+R R
Sbjct: 430 SVA--YGHYSSYVRSAPKIWHHFDDSKVTRIDEDMVLSQDSYILFYAREGTR 479
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 127/281 (45%), Gaps = 45/281 (16%)
Query: 3 ILSRLPNISGTLDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKA------VPPNLQET-- 54
+ RL + +DAHEF+ + ++ + I +E KA P +
Sbjct: 92 FVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSSSPEKIANVLK 151
Query: 55 -------------TLIQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEEC 101
T + IF G L +E C CE + + E +DL+++I ++ S+ C
Sbjct: 152 APLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDIEQNS-SITSC 210
Query: 102 LDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRF----QSGSFGKLN 157
L F+ E LH ++ + CD C +A KR+ +K+ P+IL I LKRF Q G + KL+
Sbjct: 211 LKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLS 270
Query: 158 KRVTFPETLDLSPYTSDVGDGSDI-YKLYAVVVHIDMLNASFFGHYICYIKDFQGNWYRI 216
RV FP L LS + V + DI Y L+AVVVH+ + GHY+ +K +W
Sbjct: 271 YRVVFPLELKLS---NTVDEYVDIEYSLFAVVVHVG--SGPNHGHYVSLVKS-HNHWLFF 324
Query: 217 DDWKVMGVELEEVL------------SQGAYMLLYSRVNAR 245
DD V +E V + Y+LLY + R
Sbjct: 325 DDESVEIIEESAVQTFFGSSQEYSSNTDHGYILLYESLGTR 365
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 127/281 (45%), Gaps = 45/281 (16%)
Query: 3 ILSRLPNISGTLDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKA------VPPNLQET-- 54
+ RL + +DAHEF+ + ++ + I +E KA P +
Sbjct: 106 FVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSSSPEKIANVLK 165
Query: 55 -------------TLIQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEEC 101
T + IF G L +E C CE + + E +DL+++I ++ S+ C
Sbjct: 166 APLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDIEQNS-SITSC 224
Query: 102 LDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRF----QSGSFGKLN 157
L F+ E LH ++ + CD C +A KR+ +K+ P+IL I LKRF Q G + KL+
Sbjct: 225 LKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLS 284
Query: 158 KRVTFPETLDLSPYTSDVGDGSDI-YKLYAVVVHIDMLNASFFGHYICYIKDFQGNWYRI 216
RV FP L LS + V + DI Y L+AVVVH+ + GHY+ +K +W
Sbjct: 285 YRVVFPLELKLS---NTVDEYVDIEYSLFAVVVHVG--SGPNHGHYVSLVKS-HNHWLFF 338
Query: 217 DDWKVMGVELEEVL------------SQGAYMLLYSRVNAR 245
DD V +E V + Y+LLY + R
Sbjct: 339 DDESVEIIEESAVQTFFGSSQEYSSNTDHGYILLYESLGTR 379
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 34/251 (13%)
Query: 3 ILSRLPNISGTLDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKA--------VPPNLQE- 53
+ RL + +DAHEF+ + ++ + I +E K P +
Sbjct: 94 FVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKTEHETSSSSSPEKIANG 153
Query: 54 ---------------TTLIQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASL 98
T + +IF G L +E C CE + + E +DL+++I ++ S+
Sbjct: 154 LKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDIEQNS-SI 212
Query: 99 EECLDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRF----QSGSFG 154
CL F+ E LH ++ + CD C +A KR+ +K+ P+IL I LKRF Q G +
Sbjct: 213 TSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYK 272
Query: 155 KLNKRVTFPETLDLSPYTSDVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFQGNWY 214
KL+ RV FP L LS D Y L+AVVVH+ + GHY+ +K +W
Sbjct: 273 KLSYRVVFPLELKLSNTVEPYADVE--YSLFAVVVHVG--SGPNHGHYVSLVKS-HNHWL 327
Query: 215 RIDDWKVMGVE 225
DD V +E
Sbjct: 328 FFDDENVEMIE 338
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 94 DAASLEECLDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQSGSF 153
++ SL +CL+ F +E L D+M+ C GCK + +A K+L + R P IL I LKRF F
Sbjct: 762 ESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRF 821
Query: 154 --GKLNKRVTFP-ETLDLSPYTS-DVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDF 209
KL V FP + LDLS Y S G + Y LYA+ H + GHY Y+
Sbjct: 822 MKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGG---GHYTAYVHHG 878
Query: 210 QGNWYRIDDWKVMGVELEEVLSQGAYMLLYSRV 242
WY DD V + E++ + AY+L Y R+
Sbjct: 879 GDRWYDFDDSHVHQISQEKIKTSAAYVLFYKRL 911
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 94 DAASLEECLDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQSGSF 153
++ SL +CL+ F +E L D+M+ C GCK + +A K+L + R P IL I LKRF F
Sbjct: 762 ESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRF 821
Query: 154 --GKLNKRVTFP-ETLDLSPYTS-DVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDF 209
KL V FP + LDLS Y S G + Y LYA+ H + GHY Y+
Sbjct: 822 MKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGG---GHYTAYVHHG 878
Query: 210 QGNWYRIDDWKVMGVELEEVLSQGAYMLLYSRV 242
WY DD V + E++ + AY+L Y R+
Sbjct: 879 GDRWYDFDDSHVHQISQEKIKTSAAYVLFYKRL 911
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 94 DAASLEECLDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQSGSF 153
++ SL CL+ F +E L D+M+ C CK + +A K+L + + P+IL LKRF +
Sbjct: 745 ESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 804
Query: 154 --GKLNKRVTFP-ETLDLSPYTSDVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFQ 210
K++ V FP LDLS Y + D S +Y+LYAV H L HY Y K
Sbjct: 805 LKNKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGG---HYTAYAKLID 861
Query: 211 GN-WYRIDDWKVMGVELEEVLSQGAYMLLYSRVNARPSGLQSIESSEAAD 259
N WY DD V V E+ + AY+L Y RV + + Q++E S D
Sbjct: 862 DNEWYHFDDSHVSSVNESEIKNSAAYVLFYRRVRSE-TETQTVEMSTDMD 910
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 94 DAASLEECLDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQSGSF 153
++ SL CL+ F +E L D+M+ C CK + +A K+L + + P+IL LKRF +
Sbjct: 745 ESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 804
Query: 154 --GKLNKRVTFP-ETLDLSPYTSDVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFQ 210
K++ V FP LDLS Y + D S +Y+LYAV H L HY Y K
Sbjct: 805 LKNKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGG---HYTAYAKLID 861
Query: 211 GN-WYRIDDWKVMGVELEEVLSQGAYMLLYSRVNARPSGLQSIESSEAAD 259
N WY DD V V E+ + AY+L Y RV + + Q++E S D
Sbjct: 862 DNEWYHFDDSHVSSVNESEIKNSAAYVLFYRRVRSE-TETQTVEMSTDMD 910
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 94 DAASLEECLDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQSGSF 153
++ SL CL+ F +E L D+M+ C CK + +A K+L + + P+IL LKRF +
Sbjct: 746 ESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 805
Query: 154 --GKLNKRVTFP-ETLDLSPYTSDVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFQ 210
K++ V FP LDLS Y + S +Y+LYAV H L HY Y K
Sbjct: 806 LKNKIDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYGGLGGG---HYTAYAKLID 862
Query: 211 GN-WYRIDDWKVMGVELEEVLSQGAYMLLYSRVNA 244
N WY DD V V E+ + AY+L Y RV +
Sbjct: 863 DNKWYHFDDSHVSSVNESEIRNSAAYVLFYRRVRS 897
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 85/172 (49%), Gaps = 16/172 (9%)
Query: 94 DAASLEECLDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQSGSF 153
+ SL CL+ F +E L D+M+ C GCK + +A K+L + + P+IL LKRF +
Sbjct: 731 EGISLFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 790
Query: 154 --GKLNKRVTFP-ETLDLSPYTSDVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDF- 209
K++ V F LDLS Y + S +Y+LYA+ H L HY Y K
Sbjct: 791 FKNKIDTLVNFHIHDLDLSKYVKNEDGQSYLYELYAISNHYGGLGGG---HYTAYAKLMD 847
Query: 210 QGNWYRIDDWKVMGVELEEVLSQGAYMLLYSRVNARPSGLQSIESSEAADMK 261
+ WY DD +V V E+ + AY+L Y RV + SE +DMK
Sbjct: 848 ETKWYNFDDSRVSAVNESEIKTSAAYVLFYQRVKS---------DSETSDMK 890
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 118/272 (43%), Gaps = 45/272 (16%)
Query: 7 LPNISGTLDCGRQEDAHEFMRFAIDTMQS--ICLEEFGG--------------------E 44
L N+SG RQEDA EF+ F +D M + L+E E
Sbjct: 289 LNNMSGR---PRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWE 345
Query: 45 KAVPPNLQETTLIQ--------HIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAA 96
P N T Q IFGG L+S V+ + K S + + L ++IH D
Sbjct: 346 TVGPKNKSAVTRTQSFVPSELSEIFGGQLKS-VVKAKGTKASATVQPYLLLHLDIHPDGV 404
Query: 97 S-LEECLDQFTVKEWLHGDNMYKCD--GCKGYVKAWKRLTVKRAPNILTIALKRFQSGSF 153
+E+ L F+ +E L G Y+ G G V A K + +++ I+ + L RF GS
Sbjct: 405 QGIEDALHLFSAQEDLEG---YRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQ 461
Query: 154 G--KLNKRVTFPETLDLS-PYTSDVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFQ 210
G KL K V FP L+L+ + + + S Y+L A + H + GHY +
Sbjct: 462 GSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSK--GHYTTDARRKN 519
Query: 211 GNWYRIDDWKVMGVELEEVLSQGAYMLLYSRV 242
G W R DD V + + VL AY+L Y +V
Sbjct: 520 GQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 118/272 (43%), Gaps = 45/272 (16%)
Query: 7 LPNISGTLDCGRQEDAHEFMRFAIDTMQS--ICLEEFGG--------------------E 44
L N+SG RQEDA EF+ F +D M + L+E E
Sbjct: 289 LNNMSGR---PRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWE 345
Query: 45 KAVPPNLQETTLIQ--------HIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAA 96
P N T Q IFGG L+S V+ + K S + + L ++IH D
Sbjct: 346 TVGPKNKSAVTRTQSFVPSELSEIFGGQLKS-VVKAKGTKASATVQPYLLLHLDIHPDGV 404
Query: 97 S-LEECLDQFTVKEWLHGDNMYKCD--GCKGYVKAWKRLTVKRAPNILTIALKRFQSGSF 153
+E+ L F+ +E L G Y+ G G V A K + +++ I+ + L RF GS
Sbjct: 405 QGIEDALHLFSAQEDLEG---YRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQ 461
Query: 154 G--KLNKRVTFPETLDLS-PYTSDVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFQ 210
G KL K V FP L+L+ + + + S Y+L A + H + GHY +
Sbjct: 462 GSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSK--GHYTTDARRKN 519
Query: 211 GNWYRIDDWKVMGVELEEVLSQGAYMLLYSRV 242
G W R DD V + + VL AY+L Y +V
Sbjct: 520 GQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 118/272 (43%), Gaps = 45/272 (16%)
Query: 7 LPNISGTLDCGRQEDAHEFMRFAIDTMQS--ICLEEFGG--------------------E 44
L N+SG RQEDA EF+ F +D M + L+E E
Sbjct: 289 LNNMSGR---PRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWE 345
Query: 45 KAVPPNLQETTLIQ--------HIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAA 96
P N T Q IFGG L+S V+ + K S + + L ++IH D
Sbjct: 346 TVGPKNKSAVTRTQSFVPSELSEIFGGQLKS-VVKAKGTKASATVQPYLLLHLDIHPDGV 404
Query: 97 S-LEECLDQFTVKEWLHGDNMYKCD--GCKGYVKAWKRLTVKRAPNILTIALKRFQSGSF 153
+E+ L F+ +E L G Y+ G G V A K + +++ I+ + L RF GS
Sbjct: 405 QGIEDALHLFSAQEDLEG---YRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQ 461
Query: 154 G--KLNKRVTFPETLDLS-PYTSDVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFQ 210
G KL K V FP L+L+ + + + S Y+L A + H + GHY +
Sbjct: 462 GSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSK--GHYTTDARRKN 519
Query: 211 GNWYRIDDWKVMGVELEEVLSQGAYMLLYSRV 242
G W R DD V + + VL AY+L Y +V
Sbjct: 520 GQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 14 LDCGRQEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQHIFGGHLQSEVICTE 73
LD G Q+D HEF+ + ++ G KA T++Q +F G + C++
Sbjct: 177 LDNGVQQDTHEFLTLLLSLLERC--LLHSGVKA-------KTIVQDLFSGSVSHVTTCSK 227
Query: 74 CEKNSNQYENMMD---LTVEIHGDAASLEECLDQFTVKEWLHGDNMYKCDGCKGYVKAWK 130
C ++S M D L + + G SL+ L+ + E L+GDN Y C C V A +
Sbjct: 228 CGRDSEASSKMEDFYALELNVKG-LKSLDASLNDYLSLEQLNGDNQYFCGSCNARVDATR 286
Query: 131 RLTVKRAPNILTIALKRF----QSGSFGKLNKRVTFPETLDLSPYTSDVGDGSDIYKLYA 186
+ ++ P ++T LKR ++ + K+ +FP+ LD+ ++ Y L A
Sbjct: 287 CIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSFSFPQVLDMGSRLAESSQNKLTYDLSA 346
Query: 187 VVVHIDMLNASFFGHYICYIKDFQ-GNWYRIDD 218
V++H +A GHY+ +IKD + G W+ DD
Sbjct: 347 VLIHKG--SAVNSGHYVAHIKDEKTGLWWEFDD 377
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 59/274 (21%)
Query: 19 QEDAHEFMRFAIDTMQSICLEEFGGEKAVPPNLQETTLIQH-IFGGHLQSEVICTECEKN 77
Q+D+HEF +D + E G K + + +E I H F G L+S+V CT C
Sbjct: 265 QQDSHEFFISLLDRIH----ENEGKSKCLYQDNEECQCITHKAFSGLLRSDVTCTTCGST 320
Query: 78 SNQYENMMDLTV----------------------EIHGDAASLEECLDQFTVKEWLHGDN 115
S Y+ +D+++ ++ +L CLD FT E L D
Sbjct: 321 STTYDPFIDISLTLDSMNGFSPADCRKNRYSGGPSVNAIMPTLSGCLDFFTRSEKLGPDQ 380
Query: 116 MYKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQSGSFGKLNKRV----TFPETLDLSPY 171
C C ++ K+++++R P +L + +KRF+ K ++++ +P L++SPY
Sbjct: 381 KLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRFEHSLTRKTSRKIDSYLQYPFRLNMSPY 440
Query: 172 TSDVGDGSDI------------------------YKLYAVVVHIDMLNASFFGHYICYIK 207
S G ++++AVV H ML + GHY+ Y++
Sbjct: 441 LSSSIIGKRFGNRIFAFDGEGEYDSSSSSSPSAEFEIFAVVTHKGMLES---GHYVTYLR 497
Query: 208 DFQGNWYRIDDWKVMGVELEEVLSQGAYMLLYSR 241
+G WYR DD + VE E V YML Y++
Sbjct: 498 -LKGLWYRCDDAWINEVEEEVVRGCECYMLFYAQ 530
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Query: 128 AWKRLTVKRAPNILTIALKRFQS---GSFGKLNKRVTFPETLDLSPYTSDVGDGSD--IY 182
A K++ + +AP +LTI LKRF G KLN V F E +DL Y G D +Y
Sbjct: 832 ATKKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVY 891
Query: 183 KLYAVVVHIDMLNASFFGHYICYIKDFQ---------GNWYRIDDWKVMGVELEEVLSQG 233
+L +V H + GHY+ Y++ Q WY + D V V LE+VL
Sbjct: 892 RLAGLVEHSGTMRG---GHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSE 948
Query: 234 AYMLLYSRV 242
AY+L Y R+
Sbjct: 949 AYILFYERI 957
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 88 TVEIHGDAASLEECLDQFTVKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKR 147
T + + SL CL+ F +E L D M+ C C +A K+L + R P +L I LKR
Sbjct: 760 TKKARSEPLSLYACLEAFLREEPLVPDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKR 819
Query: 148 FQ-SGSFG-KLNKRVTFP-ETLDLSPYTSDVG-DGSDIYKLYAVVVHIDMLNASFFGHYI 203
F S S KL V FP LDL+ Y ++ +Y+LYA+ H + + GHY
Sbjct: 820 FSYSRSMKHKLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYGGMGS---GHYT 876
Query: 204 CYIKDF-QGNWYRIDDWKVMGVELEEVLSQGAYMLLYSR 241
+IK WY DD + + ++V S AY+L Y R
Sbjct: 877 AHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRR 915
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 57 IQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNM 116
IQ +F GH + + C + S + E+ DL +++ G + D++ E L GDN
Sbjct: 306 IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGDNK 364
Query: 117 YKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQ----SGSFGKLNKRVTFPETLDLS--- 169
Y +G G A K + P +L + LKRF+ + K+N R FP LDL
Sbjct: 365 YHAEG-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRED 423
Query: 170 -PYTSDVGDGS--DIYKLYAVVVHIDMLNASFFGHYICYIKD-FQGNWYRIDDWKVMGVE 225
Y S D S ++Y L++V+VH ++ GHY +I+ WY+ DD +V +
Sbjct: 424 GKYLSPDADRSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWYKFDDERVTKED 480
Query: 226 LEEVLSQ 232
L+ L +
Sbjct: 481 LKRALEE 487
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 57 IQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNM 116
IQ +F GH + + C + S + E+ DL +++ G + D++ E L GDN
Sbjct: 305 IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGDNK 363
Query: 117 YKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQ----SGSFGKLNKRVTFPETLDLS--- 169
Y +G G A K + P +L + LKRF+ + K+N R FP LDL
Sbjct: 364 YHAEG-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRED 422
Query: 170 -PYTSDVGDGS--DIYKLYAVVVHIDMLNASFFGHYICYIKD-FQGNWYRIDDWKVMGVE 225
Y S D S ++Y L++V+VH ++ GHY +I+ WY+ DD +V +
Sbjct: 423 GKYLSPDADRSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWYKFDDERVTKED 479
Query: 226 LEEVLSQ 232
L+ L +
Sbjct: 480 LKRALEE 486
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 57 IQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNM 116
IQ +F GH + + C + S + E+ DL +++ G + D++ E L GDN
Sbjct: 306 IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGDNK 364
Query: 117 YKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQ----SGSFGKLNKRVTFPETLDLS--- 169
Y +G G A K + P +L + LKRF+ + K+N R FP LDL
Sbjct: 365 YHAEG-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRED 423
Query: 170 -PYTSDVGDGS--DIYKLYAVVVHIDMLNASFFGHYICYIKD-FQGNWYRIDDWKVMGVE 225
Y S D S ++Y L++V+VH ++ GHY +I+ WY+ DD +V +
Sbjct: 424 GKYLSPDADRSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWYKFDDERVTKED 480
Query: 226 LEEVLSQ 232
L+ L +
Sbjct: 481 LKRALEE 487
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1 |
chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 21/133 (15%)
Query: 128 AWKRLTVKRAPNILTIALKRFQSGSFGKLNK---RVTFPETLDLSPYTSDVGDGSD--IY 182
A K++ + +AP +LTI LKRF + G+++K V F E +DLS Y D +Y
Sbjct: 954 ARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVY 1013
Query: 183 KLYAVVVHIDMLNASFFGHYICYIKDFQGN-------------WYRIDDWKVMGVELEEV 229
+L +V H+ ++ GHY+ YI+ WY D +V LEEV
Sbjct: 1014 RLAGLVEHLGAMSR---GHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEV 1070
Query: 230 LSQGAYMLLYSRV 242
L AY+L Y R+
Sbjct: 1071 LRSEAYILFYERI 1083
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 16/187 (8%)
Query: 57 IQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNM 116
IQ +F GH + + C + S + E+ DL +++ G + D++ E L GDN
Sbjct: 305 IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGDNK 363
Query: 117 YKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQ----SGSFGKLNKRVTFPETLDLS--- 169
Y +G A K + P +L + LKRF+ + K+N R FP LDL
Sbjct: 364 YHAEG-HDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRED 422
Query: 170 -PYTSDVGDGS--DIYKLYAVVVHIDMLNASFFGHYICYIKD-FQGNWYRIDDWKVMGVE 225
Y S D S ++Y L++V+VH ++ GHY +I+ WY+ DD +V +
Sbjct: 423 GRYLSPDADKSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWYKFDDERVTKED 479
Query: 226 LEEVLSQ 232
++ L +
Sbjct: 480 VKRALEE 486
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 16/187 (8%)
Query: 57 IQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLHGDNM 116
IQ +F GH + + C + S + E+ DL +++ G + D++ E L GDN
Sbjct: 304 IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGDNK 362
Query: 117 YKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQ----SGSFGKLNKRVTFPETLDLS--- 169
Y +G A K + P +L + LKRF+ + K+N R FP LDL
Sbjct: 363 YHAEG-HDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRED 421
Query: 170 -PYTSDVGDGS--DIYKLYAVVVHIDMLNASFFGHYICYIKD-FQGNWYRIDDWKVMGVE 225
Y S D S ++Y L++V+VH ++ GHY +I+ WY+ DD +V +
Sbjct: 422 GRYLSPDADKSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWYKFDDERVTKED 478
Query: 226 LEEVLSQ 232
++ L +
Sbjct: 479 VKRALEE 485