Miyakogusa Predicted Gene
- Lj2g3v0855220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0855220.1 tr|A9TN68|A9TN68_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,25.43,1e-17,Senescence,Senescence/spartin-associated;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.35559.1
(378 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G15450.1 | Symbols: | Senescence/dehydration-associated prot... 384 e-107
AT3G21600.1 | Symbols: | Senescence/dehydration-associated prot... 371 e-103
AT3G21600.2 | Symbols: | Senescence/dehydration-associated prot... 300 1e-81
AT4G35985.1 | Symbols: | Senescence/dehydration-associated prot... 219 3e-57
AT3G51250.1 | Symbols: | Senescence/dehydration-associated prot... 208 6e-54
AT2G17840.1 | Symbols: ERD7 | Senescence/dehydration-associated ... 204 1e-52
AT3G21590.1 | Symbols: | Senescence/dehydration-associated prot... 89 4e-18
>AT4G15450.1 | Symbols: | Senescence/dehydration-associated
protein-related | chr4:8839437-8841162 FORWARD
LENGTH=381
Length = 381
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/356 (53%), Positives = 260/356 (73%), Gaps = 28/356 (7%)
Query: 34 IRQEVLIQIPGCRVYLMDEGQAVELAQGQFMIIKVMDDNVSLATIIKVGNGVQWPLTKDE 93
+ EVL+QI GCR +L++ +AVELA G F +++V+D NV+LA ++++GN +QWP+ KDE
Sbjct: 33 VSDEVLLQIHGCRAHLINGSEAVELAAGDFELVQVLDSNVALAMVVRIGNDLQWPVIKDE 92
Query: 94 PVVKVDTLHYLFTLPVKDGGSEPLSYGVTF-PEQ-----CYGSMGLLESFLKDHSCFSDL 147
PVVK+D+ YLFTLPVKDG EPLSYG+TF P S+ LL+ FL+++SCFS
Sbjct: 93 PVVKLDSRDYLFTLPVKDG--EPLSYGITFFPIDENDIVFVNSIELLDDFLRENSCFSSS 150
Query: 148 KTGK-----------KGGLDWEQFAPRVEDYNHFLAKAIAGGTGQIVKGIFMCSNAYTNQ 196
+ G+DW++FAP++EDYN+ +AKAIAGGTG I++G+F CSNAYTNQ
Sbjct: 151 PSSSSSSSSSSSSSVNNGIDWKEFAPKIEDYNNVVAKAIAGGTGHIIRGMFKCSNAYTNQ 210
Query: 197 VQSGGQTILTD-NKNNGLVRQSVSNNKTADATKKNAMNENLKRVRQLTTMTEKLSKSLLD 255
V GG+ ++T K NG +++K T KN +N+NL+RVR+L+ TEKLSK++L+
Sbjct: 211 VHKGGEIMITKAEKKNG------ASSKRNATTNKNQINKNLQRVRKLSRATEKLSKTMLN 264
Query: 256 GVGIMSGSVMAPVLKSQPGQAFLKMLPGEVLLASLDAVNKVFEATEAAQKQSLSATSQAA 315
GVG++SGSVM PV+KS+PG+AF M+PGEVLLASLDA+NK+ +A EAA++Q+LSATS+A
Sbjct: 265 GVGVVSGSVMGPVVKSKPGKAFFSMVPGEVLLASLDALNKLLDAAEAAERQTLSATSKAT 324
Query: 316 TRMVSNRYGEEAGEATEHVFATAGHAANTAWNVSKIRKAINPVTPASTAGGALRNS 371
TRMVS R GE AGEAT+ V T GHAA TAWNV IRKA +P +S G L+N+
Sbjct: 325 TRMVSERLGESAGEATKDVLGTVGHAAGTAWNVFNIRKAFSP--SSSVTSGILKNA 378
>AT3G21600.1 | Symbols: | Senescence/dehydration-associated
protein-related | chr3:7606735-7608364 REVERSE
LENGTH=374
Length = 374
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/352 (54%), Positives = 262/352 (74%), Gaps = 17/352 (4%)
Query: 29 KPKNLIRQEVLIQIPGCRVYLMDEGQAVELAQGQFMIIKVMDDNVSLATIIKVGNGVQWP 88
+P+ + +EVL+QIP CRV+L+ E +AVELA G F ++KV D+ V+LA I+++G+ +QWP
Sbjct: 28 QPQTMRAEEVLLQIPRCRVHLIGESEAVELASGDFKLVKVSDNGVTLAMIVRIGHDLQWP 87
Query: 89 LTKDEPVVKVDTLHYLFTLPVKDGGSEPLSYGVTFPEQ-----CYGSMGLLESFLKDHSC 143
+ +DEPVVK+D YLFTLPVKDG +PLSYGVTF S+ LL+ FL ++SC
Sbjct: 88 VIRDEPVVKLDARDYLFTLPVKDG--DPLSYGVTFSGDDRDVALVNSLKLLDQFLSENSC 145
Query: 144 FSDLKTGK-KGGLDWEQFAPRVEDYNHFLAKAIAGGTGQIVKGIFMCSNAYTNQVQSGGQ 202
FS + K G+DW++FAPR+EDYN+ +AKAIAGGTG I++GIF SNAY+NQV GG
Sbjct: 146 FSSTASSKVNNGIDWQEFAPRIEDYNNVVAKAIAGGTGHIIRGIFSLSNAYSNQVHKGGD 205
Query: 203 TILT---DNKNNGLVRQSVSNNKTADATKKNAMNENLKRVRQLTTMTEKLSKSLLDGVGI 259
++T +++ NG S +N ++ KKN +N +L+RVR+L+ TE LSK++L+G G+
Sbjct: 206 IMITKAEESQRNG----SYNNGNSSGNEKKNGINTHLQRVRKLSKATENLSKTMLNGAGV 261
Query: 260 MSGSVMAPVLKSQPGQAFLKMLPGEVLLASLDAVNKVFEATEAAQKQSLSATSQAATRMV 319
+SGSVM P++KS+PG AF M+PGEVLLASLDA+NK+ +ATEAA++Q+LSATS+AATRMV
Sbjct: 262 VSGSVMVPMMKSKPGMAFFSMVPGEVLLASLDALNKILDATEAAERQTLSATSRAATRMV 321
Query: 320 SNRYGEEAGEATEHVFATAGHAANTAWNVSKIRKAINPVTPASTAGGALRNS 371
S R+G+ AGEAT V ATAGHAA TAWNV KIRK P +S G ++N+
Sbjct: 322 SERFGDNAGEATGDVLATAGHAAGTAWNVLKIRKTFYP--SSSLTSGIVKNA 371
>AT3G21600.2 | Symbols: | Senescence/dehydration-associated
protein-related | chr3:7607077-7608364 REVERSE
LENGTH=299
Length = 299
Score = 300 bits (767), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/276 (52%), Positives = 204/276 (73%), Gaps = 15/276 (5%)
Query: 29 KPKNLIRQEVLIQIPGCRVYLMDEGQAVELAQGQFMIIKVMDDNVSLATIIKVGNGVQWP 88
+P+ + +EVL+QIP CRV+L+ E +AVELA G F ++KV D+ V+LA I+++G+ +QWP
Sbjct: 28 QPQTMRAEEVLLQIPRCRVHLIGESEAVELASGDFKLVKVSDNGVTLAMIVRIGHDLQWP 87
Query: 89 LTKDEPVVKVDTLHYLFTLPVKDGGSEPLSYGVTFPEQ-----CYGSMGLLESFLKDHSC 143
+ +DEPVVK+D YLFTLPVKDG +PLSYGVTF S+ LL+ FL ++SC
Sbjct: 88 VIRDEPVVKLDARDYLFTLPVKDG--DPLSYGVTFSGDDRDVALVNSLKLLDQFLSENSC 145
Query: 144 FSDLKTGK-KGGLDWEQFAPRVEDYNHFLAKAIAGGTGQIVKGIFMCSNAYTNQVQSGGQ 202
FS + K G+DW++FAPR+EDYN+ +AKAIAGGTG I++GIF SNAY+NQV GG
Sbjct: 146 FSSTASSKVNNGIDWQEFAPRIEDYNNVVAKAIAGGTGHIIRGIFSLSNAYSNQVHKGGD 205
Query: 203 TILT---DNKNNGLVRQSVSNNKTADATKKNAMNENLKRVRQLTTMTEKLSKSLLDGVGI 259
++T +++ NG S +N ++ KKN +N +L+RVR+L+ TE LSK++L+G G+
Sbjct: 206 IMITKAEESQRNG----SYNNGNSSGNEKKNGINTHLQRVRKLSKATENLSKTMLNGAGV 261
Query: 260 MSGSVMAPVLKSQPGQAFLKMLPGEVLLASLDAVNK 295
+SGSVM P++KS+PG AF M+PGEVLLASLDA++K
Sbjct: 262 VSGSVMVPMMKSKPGMAFFSMVPGEVLLASLDALSK 297
>AT4G35985.1 | Symbols: | Senescence/dehydration-associated
protein-related | chr4:17032268-17033862 REVERSE
LENGTH=448
Length = 448
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 208/389 (53%), Gaps = 54/389 (13%)
Query: 33 LIRQEVLIQIPGCRVYLMDEGQAVELAQGQFMIIKVMDDNVSLATIIKVGNGVQWPLTKD 92
L +EV++ I G V+L+D+ +VELA G I++++ ++++A +VG+ +QWPLTKD
Sbjct: 66 LATEEVILTIHGAMVHLIDKSYSVELACGDLEILRLVQGDITVAVFARVGDEIQWPLTKD 125
Query: 93 EPVVKVDTLHYLFTL-PVKDGGS----------EPLSYGVTFPEQCYGSM-GLLESFLKD 140
EP VKVD HY F+L PVK+ S E L+YG+T + M L+ L D
Sbjct: 126 EPAVKVDESHYFFSLRPVKESESSDHSVNETENEMLNYGLTMASKGQEPMLEKLDKILAD 185
Query: 141 HSCFS----------------------DLKTGKKGGLD------WEQFAPRVEDYNHFLA 172
+S F+ +LK +K ++ W AP VEDY+ A
Sbjct: 186 YSSFTAEEKQKEENVLDLTAAKETSPEELKGKRKKMVEKQCTAYWTTLAPNVEDYSGVAA 245
Query: 173 KAIAGGTGQIVKGIFMCSNAYTNQVQSGGQTILTDNKNNGLVRQSVSNNKTADATKKNAM 232
K IA G+GQ++KGI C + +++ G N +++ +S + +
Sbjct: 246 KLIAAGSGQLIKGILWCGDLTMDRLMWG----------NDFMKKKLSKAEKERQVSPGTL 295
Query: 233 NENLKRVRQLTTMTEKLSKSLLDGVGIMSGSVMAPVLKSQPGQAFLKMLPGEVLLASLDA 292
+ LKRV+++T MTEK++ +L GV +SG + V+ S+ GQ +LPGE++LA+LD
Sbjct: 296 -KRLKRVKKMTKMTEKVANGVLSGVVKVSGFFSSSVINSKAGQKLFGLLPGEMVLATLDG 354
Query: 293 VNKVFEATEAAQKQSLSATSQAATRMVSNRYGEEAGEATEHVFATAGHAANTAWNVSKIR 352
NKV +A E A + + TS T +V ++YG + +AT + AGHA TAW V KIR
Sbjct: 355 FNKVCDAVEVAGRHVMKTTSDVTTEIVDHKYGAKTAQATNEGLSAAGHAFGTAWTVFKIR 414
Query: 353 KAINP---VTPASTAGGALRNSIKNRNVG 378
+A+NP + P+S A ++ + K R G
Sbjct: 415 QALNPKSAMKPSSLAKTVVKTAAKERKKG 443
>AT3G51250.1 | Symbols: | Senescence/dehydration-associated
protein-related | chr3:19028227-19030442 FORWARD
LENGTH=463
Length = 463
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 198/387 (51%), Gaps = 69/387 (17%)
Query: 36 QEVLIQIPGCRVYLMDEGQAVELAQGQFMIIKVMDDNVSLATIIKVGNGVQWPLTKDEPV 95
+EVLI++PG + L+D+ +VELA G F I++++ +A + VGN +QWPLTK+E
Sbjct: 75 EEVLIRVPGAILNLIDKSYSVELACGDFTIVRIIQGQNIVAVLANVGNEIQWPLTKNEVA 134
Query: 96 VKVDTLHYLFTL-PVKDGG--------------------SEPLSYGVTFPEQCYGSMGL- 133
KVD HY F++ P K+ G E L+YG+T + ++ L
Sbjct: 135 AKVDGSHYFFSIHPPKEKGQGSGSDSDDEQGQKSKSKSDDEILNYGLTIASKGQENVLLV 194
Query: 134 LESFLKDHSCFSDLKTGKKG---------------------------------GLDWEQF 160
L+ L+D+SCF++ + +K W
Sbjct: 195 LDQVLRDYSCFTEQRMSEKAKETGEEVLGNSVVADTSPEELKGERKDVVEGQCAAYWTTL 254
Query: 161 APRVEDYNHFLAKAIAGGTGQIVKGIFMCSNAYTNQVQSGGQTILTDNKNNGLVRQSVSN 220
AP VEDY H AK IA G+G++++GI C + +++ G + + N L R
Sbjct: 255 APNVEDYTHSTAKMIASGSGKLIRGILWCGDVTVERLKKGNEVM-----KNRLSRAEKEK 309
Query: 221 NKTADATKKNAMNENLKRVRQLTTMTEKLSKSLLDGVGIMSGSVMAPVLKSQPGQAFLKM 280
+ + + ++ +KRV+++T MTEK++ +L GV +SG + + S+ G+ +
Sbjct: 310 DVSPETLRR------IKRVKRVTQMTEKVATGVLSGVVKVSGFITGSMANSKAGKKLFGL 363
Query: 281 LPGEVLLASLDAVNKVFEATEAAQKQSLSATSQAATRMVSNRYGEEAGEATEHVFATAGH 340
LPGE++LASLD +K+ +A E A K +S +S T +V++RYG +A EAT AGH
Sbjct: 364 LPGEIVLASLDGFSKICDAVEVAGKNVMSTSSTVTTELVNHRYGTKAAEATNEGLDAAGH 423
Query: 341 AANTAWNVSKIRKAINP---VTPASTA 364
A TAW KIRKA NP + P+S A
Sbjct: 424 AFGTAWVAFKIRKAFNPKNVIKPSSLA 450
>AT2G17840.1 | Symbols: ERD7 | Senescence/dehydration-associated
protein-related | chr2:7755923-7757798 REVERSE
LENGTH=452
Length = 452
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 204/389 (52%), Gaps = 64/389 (16%)
Query: 36 QEVLIQIPGCRVYLMDEGQAVELAQGQFMIIKVMDDNVSLATIIKVGNGVQWPLTKDEPV 95
+EV+++I G ++L+D+ +VELA G II+++ +A + V + +QWPLTKDE
Sbjct: 69 EEVILKISGAILHLIDKSYSVELACGDLEIIRIVQGENVVAVLASVSDEIQWPLTKDENS 128
Query: 96 VKVDTLHYLFTL-PVK------------DGG---SEPLSYGVTFPEQCYGSMGL-LESFL 138
VKVD HY FTL P K DGG +E L+YG+T + + + LE L
Sbjct: 129 VKVDESHYFFTLRPTKEISHDSSDEEDGDGGKNTNEMLNYGLTIASKGQEHLLVELEKIL 188
Query: 139 KDHSCFS------DLKTGKKGGLD---------------------------WEQFAPRVE 165
+D+S FS + K + LD W AP VE
Sbjct: 189 EDYSSFSVQEVSEEAKEAGEKVLDVTVARETSPVELTGERKEIVERQCSAYWTTLAPNVE 248
Query: 166 DYNHFLAKAIAGGTGQIVKGIFMCSNAYTNQVQSGGQTILTDNKNNGLVRQSVSNNKTAD 225
DY+ AK IA G+G ++KGI C + +++ G NG +++ +S +
Sbjct: 249 DYSGKAAKLIATGSGHLIKGILWCGDVTMDRLIWG----------NGFMKRRLSKAEKES 298
Query: 226 ATKKNAMNENLKRVRQLTTMTEKLSKSLLDGVGIMSGSVMAPVLKSQPGQAFLKMLPGEV 285
+ + + ++RV+++T MTE ++ S+L GV +SG + V ++ G+ F +LPGEV
Sbjct: 299 EVHPDTL-KRIRRVKRMTKMTESVANSILSGVLKVSGFFTSSVANTKVGKKFFSLLPGEV 357
Query: 286 LLASLDAVNKVFEATEAAQKQSLSATSQAATRMVSNRYGEEAGEATEHVFATAGHAANTA 345
+LASLD NKV +A E A + +S +S T +V ++YG +A EAT AG+A TA
Sbjct: 358 ILASLDGFNKVCDAVEVAGRNVMSTSSTVTTELVDHKYGGKAAEATNEGLDAAGYALGTA 417
Query: 346 WNVSKIRKAINP---VTPASTAGGALRNS 371
W KIRKAINP + P++ A A+R++
Sbjct: 418 WVAFKIRKAINPKSVLKPSTLAKTAIRSA 446
>AT3G21590.1 | Symbols: | Senescence/dehydration-associated
protein-related | chr3:7604636-7605789 REVERSE
LENGTH=198
Length = 198
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 5/129 (3%)
Query: 172 AKAIAGGTGQIVKGIFMCSNAYTNQVQSGGQTILTDNKNNGLVRQ--SVSNNKTADATKK 229
AKAIA GTG I+KGIF CSN+Y+ ++ G D + +G + Q NN+T K
Sbjct: 69 AKAIAVGTGHIIKGIFTCSNSYSKKIHEEGTIAEEDEERSGDISQIDGGGNNETNKKNKL 128
Query: 230 NAMNENLKRVRQLTTMTEKLSKSLLDGVGIMSGSVMAPVLKSQPGQAFLKMLPGEVLLAS 289
N +R +L ++E + + L+G ++S S++APV+KS+ G+A L PGEV+LAS
Sbjct: 129 NKNL---QRAEKLWKVSEAIGMAALEGGDLVSSSMIAPVVKSKLGKALLSTAPGEVILAS 185
Query: 290 LDAVNKVFE 298
LD+ +K F+
Sbjct: 186 LDSFHKHFD 194