Miyakogusa Predicted Gene

Lj2g3v0855190.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0855190.1 tr|A9TAH7|A9TAH7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_193120,41.24,3e-16, ,CUFF.35557.1
         (166 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G19880.2 | Symbols:  | Nucleotide-diphospho-sugar transferase...   213   4e-56
AT2G19880.1 | Symbols:  | Nucleotide-diphospho-sugar transferase...   206   5e-54

>AT2G19880.2 | Symbols:  | Nucleotide-diphospho-sugar transferases
           superfamily protein | chr2:8581578-8585118 FORWARD
           LENGTH=520
          Length = 520

 Score =  213 bits (543), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 108/166 (65%), Positives = 125/166 (75%), Gaps = 5/166 (3%)

Query: 1   MIQVAATLRFHLKGY-SLEDMTYTSGGLSLVYFLATCTLVELFSMWNLTRIEVLLCNILS 59
           +I + + LR ++KGY  LED T  SGG+ LV  LA CT +EL SMWNLTR EV LCN+LS
Sbjct: 355 IIHITSALRIYIKGYHQLEDTTSASGGMMLVITLAICTFIELLSMWNLTRREVQLCNMLS 414

Query: 60  PEATPLSLATYNWFLVFIAMLVDNFLYPLSAIRSHFSQSINWSGIRYYLKEGKVSKIERT 119
           PEA  LSLATYNW LVF+AMLVDNFLYP+SA RSHFSQSINWSGIRY+LK+GK+ KIE  
Sbjct: 415 PEAPRLSLATYNWGLVFVAMLVDNFLYPISAFRSHFSQSINWSGIRYHLKDGKIFKIE-- 472

Query: 120 PRREDVEPVYTDLSGKHLYGMKGLNTKGSIIRSLSRSFVR-RQPKK 164
            RR+D+ P  TDL GKHLYG KG   K S + SL R+    RQPKK
Sbjct: 473 -RRKDMGPTKTDLGGKHLYGKKGAPQKASFLSSLGRNLAHWRQPKK 517


>AT2G19880.1 | Symbols:  | Nucleotide-diphospho-sugar transferases
           superfamily protein | chr2:8581578-8585118 FORWARD
           LENGTH=519
          Length = 519

 Score =  206 bits (525), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 106/166 (63%), Positives = 125/166 (75%), Gaps = 6/166 (3%)

Query: 1   MIQVAATLRFHLKGY-SLEDMTYTSGGLSLVYFLATCTLVELFSMWNLTRIEVLLCNILS 59
           +I + + LR ++KGY  LED T ++ G+ LV  LA CT +EL SMWNLTR EV LCN+LS
Sbjct: 355 IIHITSALRIYIKGYHQLEDTT-SASGMMLVITLAICTFIELLSMWNLTRREVQLCNMLS 413

Query: 60  PEATPLSLATYNWFLVFIAMLVDNFLYPLSAIRSHFSQSINWSGIRYYLKEGKVSKIERT 119
           PEA  LSLATYNW LVF+AMLVDNFLYP+SA RSHFSQSINWSGIRY+LK+GK+ KIE  
Sbjct: 414 PEAPRLSLATYNWGLVFVAMLVDNFLYPISAFRSHFSQSINWSGIRYHLKDGKIFKIE-- 471

Query: 120 PRREDVEPVYTDLSGKHLYGMKGLNTKGSIIRSLSRSFVR-RQPKK 164
            RR+D+ P  TDL GKHLYG KG   K S + SL R+    RQPKK
Sbjct: 472 -RRKDMGPTKTDLGGKHLYGKKGAPQKASFLSSLGRNLAHWRQPKK 516