Miyakogusa Predicted Gene

Lj2g3v0854150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0854150.1 tr|I1J4I8|I1J4I8_SOYBN Cytosine-specific
methyltransferase OS=Glycine max PE=3
SV=1,84.77,0,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; DNA_methylase,C-5 cytosine
methyltransfer,CUFF.35556.1
         (302 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69770.1 | Symbols: CMT3 | chromomethylase 3 | chr1:26248496-...   398   e-111
AT4G19020.1 | Symbols: CMT2 | chromomethylase 2 | chr4:10414526-...   376   e-105
AT1G80740.1 | Symbols: CMT1, DMT4 | chromomethylase 1 | chr1:303...   322   2e-88
AT4G13610.1 | Symbols: MEE57 | DNA (cytosine-5-)-methyltransfera...   153   1e-37
AT4G14140.1 | Symbols: MET2, DMT02, DMT2, MET02 | DNA methyltran...   146   2e-35
AT4G14140.2 | Symbols: DMT2 | DNA methyltransferase 2 | chr4:814...   146   2e-35
AT4G08990.1 | Symbols:  | DNA (cytosine-5-)-methyltransferase fa...   143   2e-34
AT5G49160.1 | Symbols: MET1, MET2, METI, DDM2, DMT01, DMT1 | met...   139   2e-33

>AT1G69770.1 | Symbols: CMT3 | chromomethylase 3 |
           chr1:26248496-26253519 REVERSE LENGTH=839
          Length = 839

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/303 (64%), Positives = 233/303 (76%), Gaps = 1/303 (0%)

Query: 1   MDIVQYLKPKFVLMENVVDIVKFANGFLGRYALGRLLQMNYQSSLGIMAAGAYGLPQFRL 60
           M+IV+YLKPKFVLMENVVD++K A G+L R+A+GRLLQMNYQ   G+MAAGAYGL QFRL
Sbjct: 488 MNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRL 547

Query: 61  RVFIWGAAPSEKLPQFPLPTHDVIVRGVIPVEFEINTVAFNEGHNEPLQRILLLEDAISD 120
           R F+WGA PSE +PQFPLPTHD++ RG I  EF+ N VA++EGH   L   LLL+D ISD
Sbjct: 548 RFFLWGALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISD 607

Query: 121 LPPIENDERRDEMQYDKPPQTEFQKFIRLSKNEMXXXXXXXXXXX-XXHDHRPLKLNVDD 179
           LP + N E+RDE+ YDK P T FQKFIRL K+E               +DH PL LN++D
Sbjct: 608 LPAVANSEKRDEITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHVLYDHHPLNLNIND 667

Query: 180 YQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWDPNVGRVYLDSGKPLVPNYAMSFVDGTSS 239
           Y+RVC++PK+KG  FRD PGV V P N V+ +    RV L+SGK LVP+YA+++VDG S 
Sbjct: 668 YERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKTLVPDYALTYVDGKSC 727

Query: 240 KPFARLWWDETVPTVVTRAEPHHQAIMHPEQDRVLSIRENARLQGFPDYYKLCGPVKERY 299
           KPF RLWWDE VPTVVTRAEPH+Q I+HPEQ+RVLSIRENARLQGFPD YKL GP K++Y
Sbjct: 728 KPFGRLWWDEIVPTVVTRAEPHNQVIIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKY 787

Query: 300 IQV 302
           IQV
Sbjct: 788 IQV 790


>AT4G19020.1 | Symbols: CMT2 | chromomethylase 2 |
            chr4:10414526-10420936 FORWARD LENGTH=1295
          Length = 1295

 Score =  376 bits (966), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/304 (58%), Positives = 225/304 (74%), Gaps = 3/304 (0%)

Query: 1    MDIVQYLKPKFVLMENVVDIVKFANGFLGRYALGRLLQMNYQSSLGIMAAGAYGLPQFRL 60
            MDIV+YLKP +VLMENVVDI++   G LGRYAL RL+ M YQ+ LGIM AG YGL QFR 
Sbjct: 943  MDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQFRS 1002

Query: 61   RVFIWGAAPSEKLPQFPLPTHDVIVRGVIPVEFEINTVAFNEGHNEPLQRILLLEDAISD 120
            RVF+WGA P++ LP FPLPTHDVIVR  +P+EFE N VA+ EG    L++ L+L+DAISD
Sbjct: 1003 RVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVAYAEGQPRKLEKALVLKDAISD 1062

Query: 121  LPPIENDERRDEMQYDKPPQTEFQKFIRLSKNEMXXXX--XXXXXXXXXHDHRPLKLNVD 178
            LP + NDE R+++ Y+  P+T+FQ++IR +K ++               HDHRP  +N D
Sbjct: 1063 LPHVSNDEDREKLPYESLPKTDFQRYIRSTKRDLTGSAIDNCNKRTMLLHDHRPFHINED 1122

Query: 179  DYQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWDPNVGRVYLDSGKPLVPNYAMSFVDGTS 238
            DY RVC+IPK+KG  FRDLPG+ VR +N V  DP++  V L SGKPLVP Y  +F  G S
Sbjct: 1123 DYARVCQIPKRKGANFRDLPGLIVR-NNTVCRDPSMEPVILPSGKPLVPGYVFTFQQGKS 1181

Query: 239  SKPFARLWWDETVPTVVTRAEPHHQAIMHPEQDRVLSIRENARLQGFPDYYKLCGPVKER 298
             +PFARLWWDETVPTV+T    H QA++HPEQDRVL+IRE+ARLQGFPDY++ CG +KER
Sbjct: 1182 KRPFARLWWDETVPTVLTVPTCHSQALLHPEQDRVLTIRESARLQGFPDYFQFCGTIKER 1241

Query: 299  YIQV 302
            Y Q+
Sbjct: 1242 YCQI 1245


>AT1G80740.1 | Symbols: CMT1, DMT4 | chromomethylase 1 |
           chr1:30342394-30346831 FORWARD LENGTH=791
          Length = 791

 Score =  322 bits (825), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 165/303 (54%), Positives = 207/303 (68%), Gaps = 3/303 (0%)

Query: 1   MDIVQYLKPKFVLMENVVDIVKFANGFLGRYALGRLLQMNYQSSLGIMAAGAYGLPQFRL 60
           +DI+ +LKP +VLMENVVD+++F+ GFL R+A+   + MNYQ+ LG+MAAG+YGLPQ R 
Sbjct: 445 LDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRN 504

Query: 61  RVFIWGAAPSEKLPQFPLPTHDVIVRGVIPVEFEINTVAFNEGHNEPLQRILLLEDAISD 120
           RVF+W A PSEKLP +PLPTH+V  +   P EF+   V   +     L   L L DAISD
Sbjct: 505 RVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQVGRIQMEFLKLDNALTLADAISD 564

Query: 121 LPPIENDERRDEMQY-DKPPQTEFQKFIRLSKNEMXXXXXXXXXXXXXHDHRPLKLNVDD 179
           LPP+ N    D M Y D  P+TEF+ FI L ++E               DH+PL L  DD
Sbjct: 565 LPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLLPAFGGDPTRRLFDHQPLVLGDDD 624

Query: 180 YQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWDPNVGRVYLDSGKPLVPNYAMSFVDGTSS 239
            +RV  IPK+KG  +RD+PGV V  +NK E +P   R  L SGK +VP YA+SF+ G S 
Sbjct: 625 LERVSYIPKQKGANYRDMPGVLVH-NNKAEINPRF-RAKLKSGKNVVPAYAISFIKGKSK 682

Query: 240 KPFARLWWDETVPTVVTRAEPHHQAIMHPEQDRVLSIRENARLQGFPDYYKLCGPVKERY 299
           KPF RLW DE V TVVTRAEPH+Q ++HP Q+RVLS+RENARLQGFPD YKLCG +KE+Y
Sbjct: 683 KPFGRLWGDEIVNTVVTRAEPHNQCVIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKY 742

Query: 300 IQV 302
           IQV
Sbjct: 743 IQV 745


>AT4G13610.1 | Symbols: MEE57 | DNA (cytosine-5-)-methyltransferase
            family protein | chr4:7915022-7921231 FORWARD LENGTH=1404
          Length = 1404

 Score =  153 bits (387), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 143/306 (46%), Gaps = 41/306 (13%)

Query: 1    MDIVQYLKPKFVLMENVVDIVKFANGFLGRYALGRLLQMNYQSSLGIMAAGAYGLPQFRL 60
            +    Y +PK+ L+ENV   V F  G      +  LL+M YQ   G++ AGAYG+ Q R 
Sbjct: 1111 LSFADYFRPKYFLLENVKTFVSFNEGHTFHLTVASLLEMGYQVRFGLLEAGAYGISQPRK 1170

Query: 61   RVFIWGAAPSEKLPQFPLPTHDVIVRGV-IPVEFEINTVAFNEGHNEPLQRILLLEDAIS 119
            R FIW AAP+E LP++P P H     G  IP+   ++  A          R + + DAI 
Sbjct: 1171 RAFIWAAAPNEVLPEWPEPMHVFNNPGFKIPLSQGLHYAAVQSTKFGAPFRSITVRDAIG 1230

Query: 120  DLPPIENDERRDEMQYDKPPQTEFQKFIRLSKNEMXXXXXXXXXXXXXHDHRPLKLNVDD 179
            DLPPIE+ E                   +++K EM              DH   K+N  +
Sbjct: 1231 DLPPIESGES------------------KINKEEMRGSMTVLT------DHICKKMNELN 1266

Query: 180  YQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWDPNVGRVYLDSGKPLVPNYAMSFVDGTSS 239
              R  +IPK  G  +RDLP   V   N +              K +VPN      D    
Sbjct: 1267 LIRCKKIPKTPGADWRDLPDEHVNLSNGIV-------------KNIVPNLLNKAKDHNGY 1313

Query: 240  KP-FARLWWDETVPTVVTRAEPHHQAIM--HPEQDRVLSIRENARLQGFPDYYKLCGPVK 296
            K  + RL W   +PT +T  +P     M  HP+QDR++S+RE AR QGFPD YK  G +K
Sbjct: 1314 KGLYGRLDWHGNLPTCITNLQPMGLVGMCFHPDQDRIISVRECARSQGFPDSYKFSGNIK 1373

Query: 297  ERYIQV 302
            +++ QV
Sbjct: 1374 DKHRQV 1379


>AT4G14140.1 | Symbols: MET2, DMT02, DMT2, MET02 | DNA
            methyltransferase 2 | chr4:8146345-8152131 FORWARD
            LENGTH=1519
          Length = 1519

 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 148/310 (47%), Gaps = 37/310 (11%)

Query: 1    MDIVQYLKPKFVLMENVVDIVKFANGFLGRYALGRLLQMNYQSSLGIMAAGAYGLPQFRL 60
            +    Y +PK+ L+ENV   V +  G   +  +  LL+M YQ   GI+ AG YG+ Q R 
Sbjct: 1209 LSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRK 1268

Query: 61   RVFIWGAAPSEKLPQFPLPTHDVIVRG---VIPVEFEINTVAFNEGHNEPLQRILLLEDA 117
            RV IW A+P E LP++P P H     G    +P     +    N     P  R + + D 
Sbjct: 1269 RVIIWAASPEEVLPEWPEPMHVFDNPGSKISLPRGLRYD-AGCNTKFGAPF-RSITVRDT 1326

Query: 118  ISDLPPIENDERRDEMQYDKPPQTEFQKFIRLSKNEMXXXXXXXXXXXXXHDHRPLKLNV 177
            I DLPP+EN E +   +Y   P + FQK IR + + +              DH    LN 
Sbjct: 1327 IGDLPPVENGESKINKEYGTTPASWFQKKIRGNMSVLT-------------DHICKGLNE 1373

Query: 178  DDYQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWDPNVGRVYLDSGKPLVPNYAMSFVDGT 237
             +  R  +IPK+ G  +RDLP   V   N +          ++  +PL    A+S     
Sbjct: 1374 LNLIRCKKIPKRPGADWRDLPDENVTLSNGL----------VEKLRPL----ALSKTAKN 1419

Query: 238  SSK---PFARLWWDETVPTVVTRAEPHHQAIM--HPEQDRVLSIRENARLQGFPDYYKLC 292
             ++    + RL W   +P  +T  +P  +  M  HPEQDR++++RE AR QGFPD Y+  
Sbjct: 1420 HNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFS 1479

Query: 293  GPVKERYIQV 302
            G  K ++ Q+
Sbjct: 1480 GTTKHKHRQI 1489


>AT4G14140.2 | Symbols: DMT2 | DNA methyltransferase 2 |
            chr4:8146345-8152131 FORWARD LENGTH=1545
          Length = 1545

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 148/310 (47%), Gaps = 37/310 (11%)

Query: 1    MDIVQYLKPKFVLMENVVDIVKFANGFLGRYALGRLLQMNYQSSLGIMAAGAYGLPQFRL 60
            +    Y +PK+ L+ENV   V +  G   +  +  LL+M YQ   GI+ AG YG+ Q R 
Sbjct: 1235 LSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRK 1294

Query: 61   RVFIWGAAPSEKLPQFPLPTHDVIVRG---VIPVEFEINTVAFNEGHNEPLQRILLLEDA 117
            RV IW A+P E LP++P P H     G    +P     +    N     P  R + + D 
Sbjct: 1295 RVIIWAASPEEVLPEWPEPMHVFDNPGSKISLPRGLRYD-AGCNTKFGAPF-RSITVRDT 1352

Query: 118  ISDLPPIENDERRDEMQYDKPPQTEFQKFIRLSKNEMXXXXXXXXXXXXXHDHRPLKLNV 177
            I DLPP+EN E +   +Y   P + FQK IR + + +              DH    LN 
Sbjct: 1353 IGDLPPVENGESKINKEYGTTPASWFQKKIRGNMSVLT-------------DHICKGLNE 1399

Query: 178  DDYQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWDPNVGRVYLDSGKPLVPNYAMSFVDGT 237
             +  R  +IPK+ G  +RDLP   V   N +          ++  +PL    A+S     
Sbjct: 1400 LNLIRCKKIPKRPGADWRDLPDENVTLSNGL----------VEKLRPL----ALSKTAKN 1445

Query: 238  SSK---PFARLWWDETVPTVVTRAEPHHQAIM--HPEQDRVLSIRENARLQGFPDYYKLC 292
             ++    + RL W   +P  +T  +P  +  M  HPEQDR++++RE AR QGFPD Y+  
Sbjct: 1446 HNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFS 1505

Query: 293  GPVKERYIQV 302
            G  K ++ Q+
Sbjct: 1506 GTTKHKHRQI 1515


>AT4G08990.1 | Symbols:  | DNA (cytosine-5-)-methyltransferase family
            protein | chr4:5764781-5770496 FORWARD LENGTH=1512
          Length = 1512

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 149/310 (48%), Gaps = 37/310 (11%)

Query: 1    MDIVQYLKPKFVLMENVVDIVKFANGFLGRYALGRLLQMNYQSSLGIMAAGAYGLPQFRL 60
            +    Y +PK+ L+ENV   V +  G   +  +  LL++ YQ   GI+ AG YG+ Q R 
Sbjct: 1202 LSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEIGYQVRFGILEAGTYGVSQPRK 1261

Query: 61   RVFIWGAAPSEKLPQFPLPTHDVIVRG---VIPVEFEINTVAFNEGHNEPLQRILLLEDA 117
            RV IW A+P E LP++P P H     G    +P     +TV  N     P  R + + D 
Sbjct: 1262 RVIIWAASPEEVLPEWPEPMHVFDNPGSKISLPRGLHYDTVR-NTKFGAPF-RSITVRDT 1319

Query: 118  ISDLPPIENDERRDEMQYDKPPQTEFQKFIRLSKNEMXXXXXXXXXXXXXHDHRPLKLNV 177
            I DLP +EN E +   +Y   P + FQK IR + + +              DH    LN 
Sbjct: 1320 IGDLPLVENGESKINKEYRTTPVSWFQKKIRGNMSVLT-------------DHICKGLNE 1366

Query: 178  DDYQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWDPNVGRVYLDSGKPLVPNYAMSFVDGT 237
             +  R  +IPK+ G  +RDLP   V   N +          ++  +PL    A+S     
Sbjct: 1367 LNLIRCKKIPKRPGADWRDLPDENVTLSNGL----------VEKLRPL----ALSKTAKN 1412

Query: 238  SSK---PFARLWWDETVPTVVTRAEPHHQAIM--HPEQDRVLSIRENARLQGFPDYYKLC 292
             ++    + RL W   +P  +T  +P  +  M  HPEQDR++++RE AR QGFPD Y+  
Sbjct: 1413 HNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFS 1472

Query: 293  GPVKERYIQV 302
            G  K ++ Q+
Sbjct: 1473 GTTKHKHRQI 1482


>AT5G49160.1 | Symbols: MET1, MET2, METI, DDM2, DMT01, DMT1 |
            methyltransferase 1 | chr5:19932501-19938186 FORWARD
            LENGTH=1534
          Length = 1534

 Score =  139 bits (351), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 146/310 (47%), Gaps = 37/310 (11%)

Query: 1    MDIVQYLKPKFVLMENVVDIVKFANGFLGRYALGRLLQMNYQSSLGIMAAGAYGLPQFRL 60
            +    Y +P++ L+ENV   V F  G   +  L  LL+M YQ   GI+ AGAYG+ Q R 
Sbjct: 1224 LSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRK 1283

Query: 61   RVFIWGAAPSEKLPQFPLPTHDVIVRGVIPVEFEIN-----TVAFNEGHNEPLQRILLLE 115
            R FIW AAP E LP++P P H   V GV  ++  ++         +     P  R + + 
Sbjct: 1284 RAFIWAAAPEEVLPEWPEPMH---VFGVPKLKISLSQGLHYAAVRSTALGAPF-RPITVR 1339

Query: 116  DAISDLPPIENDERRDEMQYDKPPQTEFQKFIRLSKNEMXXXXXXXXXXXXXHDHRPLKL 175
            D I DLP +EN + R   +Y +   + FQK IR +   +              DH    +
Sbjct: 1340 DTIGDLPSVENGDSRTNKEYKEVAVSWFQKEIRGNTIALT-------------DHICKAM 1386

Query: 176  NVDDYQRVCRIPKKKGGCFRDLPGVRVR-PDNKVEWDPNVGRVYLDSGKPLVPNYAMSFV 234
            N  +  R   IP + G  + DLP  +V   D +VE          +     +PN A    
Sbjct: 1387 NELNLIRCKLIPTRPGADWHDLPKRKVTLSDGRVE----------EMIPFCLPNTAERH- 1435

Query: 235  DGTSSKPFARLWWDETVPTVVTRAEPHHQAIM--HPEQDRVLSIRENARLQGFPDYYKLC 292
            +G     + RL W    PT VT  +P  +  M  HPEQ R+L++RE AR QGFPD Y+  
Sbjct: 1436 NGWKGL-YGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPDSYEFA 1494

Query: 293  GPVKERYIQV 302
            G +  ++ Q+
Sbjct: 1495 GNINHKHRQI 1504