Miyakogusa Predicted Gene

Lj2g3v0854130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0854130.1 Non Chatacterized Hit- tr|I1MM17|I1MM17_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21174
PE,77.18,0,MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT
TIM-17,NULL; seg,NULL; Tim17,Mitochondrial i,CUFF.35554.1
         (206 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37410.2 | Symbols: ATTIM17-2, TIM17, TIM17-2 | translocase i...   227   5e-60
AT2G37410.1 | Symbols: ATTIM17-2, TIM17, TIM17-2 | translocase i...   227   5e-60
AT1G20350.1 | Symbols: ATTIM17-1, TIM17-1 | translocase inner me...   213   9e-56
AT5G11690.1 | Symbols: ATTIM17-3, TIM17-3 | translocase inner me...   121   3e-28

>AT2G37410.2 | Symbols: ATTIM17-2, TIM17, TIM17-2 | translocase
           inner membrane subunit 17-2 | chr2:15698119-15698850
           REVERSE LENGTH=243
          Length = 243

 Score =  227 bits (578), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 124/246 (50%), Positives = 156/246 (63%), Gaps = 43/246 (17%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPNGQRFLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHF+KG +NSP G RF+G +Q+V +NAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RVGGSFAVWGGLFSACDCTLVYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGG 120
           R GGSFAVWGGLFS  DCT+VY RQKEDPWNSI+AGA TGG L+MRQG  A++RSA FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VVLALIEGAGIALNKFISTQQPMPELMEEPV----------------------------- 151
           V+LALIEGAGI LNK ++  QP   +ME+P                              
Sbjct: 121 VLLALIEGAGIMLNKVLA--QPQNMMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 178

Query: 152 ---------VATGFPSEDSA--SVGTSWLGGLLGRGKKEDPRESARSQTKILESFDAPPV 200
                    + +   ++++A  S  +SW GGL  + KKE+ +  + S+T++LESFDAPPV
Sbjct: 179 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLFDK-KKEEVQPGSESKTEVLESFDAPPV 237

Query: 201 PNFEYN 206
           P+FE+ 
Sbjct: 238 PSFEFK 243


>AT2G37410.1 | Symbols: ATTIM17-2, TIM17, TIM17-2 | translocase
           inner membrane subunit 17-2 | chr2:15698119-15698850
           REVERSE LENGTH=243
          Length = 243

 Score =  227 bits (578), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 124/246 (50%), Positives = 156/246 (63%), Gaps = 43/246 (17%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPNGQRFLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHF+KG +NSP G RF+G +Q+V +NAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RVGGSFAVWGGLFSACDCTLVYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGG 120
           R GGSFAVWGGLFS  DCT+VY RQKEDPWNSI+AGA TGG L+MRQG  A++RSA FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VVLALIEGAGIALNKFISTQQPMPELMEEPV----------------------------- 151
           V+LALIEGAGI LNK ++  QP   +ME+P                              
Sbjct: 121 VLLALIEGAGIMLNKVLA--QPQNMMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 178

Query: 152 ---------VATGFPSEDSA--SVGTSWLGGLLGRGKKEDPRESARSQTKILESFDAPPV 200
                    + +   ++++A  S  +SW GGL  + KKE+ +  + S+T++LESFDAPPV
Sbjct: 179 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLFDK-KKEEVQPGSESKTEVLESFDAPPV 237

Query: 201 PNFEYN 206
           P+FE+ 
Sbjct: 238 PSFEFK 243


>AT1G20350.1 | Symbols: ATTIM17-1, TIM17-1 | translocase inner
           membrane subunit 17-1 | chr1:7043737-7044393 FORWARD
           LENGTH=218
          Length = 218

 Score =  213 bits (541), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 114/220 (51%), Positives = 136/220 (61%), Gaps = 16/220 (7%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPNGQRFLGASQAVRLNAP 60
           MGTPE+SREPCPDRILDD+             +H ++G++NSP G R  G  QA+R++ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RVGGSFAVWGGLFSACDCTLVYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGG 120
           R GGSF+VWGGL+S  DC LVYARQKEDPWNSIL+GA TGG L++RQGL ASARSA  GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VVLALIEGAGIALNKFISTQQPMPELMEEPVVATGFPSEDSASVGTS------------- 167
           V+LA+IEG GI LNK  ST     E   E   AT  P       G S             
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAH--NEQFMEDHAATSLPYGMGQISGQSVPVPETSSSSSGS 178

Query: 168 -WLGGLLGRGKKEDPRESARSQTKILESFDAPPVPNFEYN 206
               G L + KKE     + S+T ILESFDAPPVP +E+ 
Sbjct: 179 VSWFGSLFKKKKETEDHHSESRTHILESFDAPPVPTYEFK 218


>AT5G11690.1 | Symbols: ATTIM17-3, TIM17-3 | translocase inner
           membrane subunit 17-3 | chr5:3761759-3762160 FORWARD
           LENGTH=133
          Length = 133

 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/127 (45%), Positives = 84/127 (66%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPNGQRFLGASQAVRLNAP 60
           M T + S+E    RI++ I             +HF++G +NSP G R++G +QA  +NAP
Sbjct: 1   MDTKKKSKEHGLYRIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAP 60

Query: 61  RVGGSFAVWGGLFSACDCTLVYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGG 120
           R+GG+FAV+GGL S  D  LV  R+KEDPWNSI+AGA TGG+L++R+G+ A++ SA   G
Sbjct: 61  RLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFG 120

Query: 121 VVLALIE 127
             LA++ 
Sbjct: 121 FFLAVLN 127