Miyakogusa Predicted Gene
- Lj2g3v0813080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0813080.1 Non Chatacterized Hit- tr|I3SR86|I3SR86_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.57,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; Ras subfamily of
RAS small GTPases,Small ,CUFF.35484.1
(210 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | RHO-r... 393 e-110
AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-relat... 325 1e-89
AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-lik... 318 2e-87
AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 314 2e-86
AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 314 2e-86
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-l... 314 2e-86
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R... 309 1e-84
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP... 306 5e-84
AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-l... 306 7e-84
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related... 305 2e-83
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 304 3e-83
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 304 3e-83
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |... 301 3e-82
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-lik... 287 3e-78
AT3G51290.2 | Symbols: | Protein of unknown function (DUF630) ;... 253 7e-68
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 102 2e-22
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C... 96 2e-20
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-relat... 96 2e-20
AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-bindi... 95 3e-20
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, R... 94 7e-20
AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 94 8e-20
AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 94 8e-20
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | R... 94 8e-20
AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C... 93 1e-19
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 92 2e-19
AT5G59840.1 | Symbols: | Ras-related small GTP-binding family p... 92 2e-19
AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPas... 92 3e-19
AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A... 91 4e-19
AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |... 91 4e-19
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase ho... 91 5e-19
AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 91 7e-19
AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 91 7e-19
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTP... 91 7e-19
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, R... 91 7e-19
AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 90 9e-19
AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 90 9e-19
AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 90 9e-19
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RA... 90 1e-18
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase hom... 89 2e-18
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase hom... 89 3e-18
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A... 89 3e-18
AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homo... 89 3e-18
AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase ho... 88 3e-18
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small... 88 5e-18
AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B... 87 6e-18
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase ... 87 9e-18
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A, R... 86 2e-17
AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D... 86 2e-17
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RAB... 85 3e-17
AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A... 85 4e-17
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C, R... 85 4e-17
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase ho... 84 5e-17
AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E... 84 5e-17
AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C... 84 6e-17
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB G... 84 6e-17
AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A... 84 6e-17
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-rela... 84 6e-17
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 84 8e-17
AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homo... 84 9e-17
AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G... 84 9e-17
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB... 83 1e-16
AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A... 83 1e-16
AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F... 83 1e-16
AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 82 2e-16
AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 82 2e-16
AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E... 82 2e-16
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | Ras-rel... 82 2e-16
AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D... 81 4e-16
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D... 81 5e-16
AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A | chr4:61... 81 5e-16
AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 81 6e-16
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 81 6e-16
AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I... 81 6e-16
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 80 8e-16
AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H | chr2:... 80 1e-15
AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 79 3e-15
AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 78 3e-15
AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A | chr5:25... 78 5e-15
AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homol... 77 7e-15
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase hom... 77 1e-14
AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B... 75 2e-14
AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 | chr5:972... 75 2e-14
AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |... 75 2e-14
AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protei... 74 5e-14
AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 72 3e-13
AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 72 3e-13
AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase h... 72 3e-13
AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 69 2e-12
AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 | chr5:223922... 69 2e-12
AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear pr... 69 3e-12
AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear... 69 3e-12
AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 | c... 68 4e-12
AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 | ... 63 1e-10
AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 60 1e-09
AT2G21880.2 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homo... 60 1e-09
AT3G05310.1 | Symbols: MIRO3 | MIRO-related GTP-ase 3 | chr3:151... 50 9e-07
>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 |
RHO-related protein from plants 9 |
chr4:14278289-14279705 FORWARD LENGTH=209
Length = 209
Score = 393 bits (1009), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/210 (90%), Positives = 197/210 (93%), Gaps = 3/210 (1%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 61
MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDG IVNLGLWD
Sbjct: 1 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWD 60
Query: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 121
TAGQEDYSRLRPLSYRGADIFVLAFSLIS+ASYENVLKKWMPELRRFAPNVPIVLVGTKL
Sbjct: 61 TAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKL 120
Query: 122 DLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 181
DLR+D+GY ADH +NVITS +GEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP
Sbjct: 121 DLRDDKGYLADH--TNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 178
Query: 182 PRRKEMA-SKKRHRRSGCSFVGIVCGGCAA 210
PRRKE+ +K HRRSGCS IVCGGC A
Sbjct: 179 PRRKEVPRRRKNHRRSGCSIASIVCGGCTA 208
>AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-related
protein from plants 10 | chr3:17731561-17733241 FORWARD
LENGTH=208
Length = 208
Score = 325 bits (834), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/204 (77%), Positives = 177/204 (86%), Gaps = 1/204 (0%)
Query: 3 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWDT 62
SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS NV V+G VNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDT 63
Query: 63 AGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLD 122
AGQEDY+RLRPLSYRGAD+FVLAFSLISRASYENV KKW+PEL+ FAP VPIVLVGTK+D
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGTKMD 123
Query: 123 LREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPP 182
LREDR Y +DH G + +T+++GEELRK IGA YIECSSKTQQNVKAVFD AIKVV++P
Sbjct: 124 LREDRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKVVIKPA 183
Query: 183 RRKEMASKKRHRRSGCSFVGIVCG 206
+++ KK+ RSGC I+CG
Sbjct: 184 VKQKEKKKKQKPRSGC-LSNILCG 206
>AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-like
10 | chr5:25237236-25238939 FORWARD LENGTH=215
Length = 215
Score = 318 bits (815), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 165/179 (92%)
Query: 3 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWDT 62
SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV V+G+ VNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDT 63
Query: 63 AGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLD 122
AGQEDY+RLRPLSYRGAD+FVL+FSL+SRASYENV KKW+PEL+ FAP VP+VLVGTKLD
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLSFSLVSRASYENVFKKWIPELQHFAPGVPLVLVGTKLD 123
Query: 123 LREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 181
LRED+ Y ADH G + +T+A+GEELRK IGA YIECSSKTQQNVKAVFD+AIK V++P
Sbjct: 124 LREDKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAIKEVIKP 182
>AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 314 bits (805), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 144/181 (79%), Positives = 167/181 (92%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 61
MSAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV VDG+ +NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 121
TAGQEDY+RLRPLSYRGAD+F+LAFSL+S+ASYENV KKW+PELR +AP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 122 DLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 181
DLR+D+ +FA+H G+ I++A+GEEL+K IGA AYIECS+KTQQNVKAVFD AIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180
Query: 182 P 182
P
Sbjct: 181 P 181
>AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 314 bits (805), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 144/181 (79%), Positives = 167/181 (92%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 61
MSAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV VDG+ +NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 121
TAGQEDY+RLRPLSYRGAD+F+LAFSL+S+ASYENV KKW+PELR +AP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 122 DLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 181
DLR+D+ +FA+H G+ I++A+GEEL+K IGA AYIECS+KTQQNVKAVFD AIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180
Query: 182 P 182
P
Sbjct: 181 P 181
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-like
3 | chr4:16673176-16674540 FORWARD LENGTH=198
Length = 198
Score = 314 bits (805), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 144/181 (79%), Positives = 167/181 (92%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 61
MSAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV VDG+ +NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 121
TAGQEDY+RLRPLSYRGAD+F+LAFSL+S+ASYENV KKW+PELR +AP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 122 DLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 181
DLR+D+ +FA+H G+ I++A+GEEL+K IGA AYIECS+KTQQNVKAVFD AIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180
Query: 182 P 182
P
Sbjct: 181 P 181
>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 |
RHO-related protein from plants 1 |
chr3:19043197-19044215 FORWARD LENGTH=197
Length = 197
Score = 309 bits (791), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 163/178 (91%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 61
MSAS+F+KCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV V+GS VNLGLWD
Sbjct: 1 MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
Query: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 121
TAGQEDY+RLRPLSYRGAD+F+LAFSLIS+ASYENV KKW+PEL+ +AP VPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 122 DLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179
DLR+D+ +F DH G+ IT+A+GEELRKQIGA YIECSSKTQ+NVKAVFD AI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVL 178
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP
binding protein 5 | chr1:28475964-28477377 FORWARD
LENGTH=196
Length = 196
Score = 306 bits (785), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 161/178 (90%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 61
MSAS+FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANV VDG+ VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
Query: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 121
TAGQEDY+RLRPLSYRGAD+F+LAFSLIS+ASYENV KKW+PELR +AP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
Query: 122 DLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179
DLR+D+ +F DH G+ IT+ +GEEL+K IG+ YIECSSKTQQNVKAVFD AIKVVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178
>AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-like
2 | chr5:18643761-18645758 FORWARD LENGTH=201
Length = 201
Score = 306 bits (784), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 140/179 (78%), Positives = 161/179 (89%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 61
MS ++FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANV VDGS VNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 121
TAGQEDY+RLRPLSYRGAD+F+LAFSLIS+ASYEN+ KKW+PEL+ +AP +PIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120
Query: 122 DLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
DLR+D+ + DH G+ IT+A+GEELRK IGA Y+ECSSKTQQNVKAVFDTAI+V L+
Sbjct: 121 DLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALR 179
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related
protein from plants 2 | chr1:6967223-6968603 FORWARD
LENGTH=195
Length = 195
Score = 305 bits (780), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 141/176 (80%), Positives = 160/176 (90%)
Query: 4 ASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWDTA 63
AS+FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANV VDG+ VNLGLWDTA
Sbjct: 2 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTA 61
Query: 64 GQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDL 123
GQEDY+RLRPLSYRGAD+F+LAFSLIS+ASYEN+ KKW+PELR +AP VPI+LVGTKLDL
Sbjct: 62 GQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDL 121
Query: 124 REDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179
R+D+ +F DH G+ IT+ +GEEL+K IG+A YIECSSKTQQNVKAVFD AIKVVL
Sbjct: 122 RDDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVL 177
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 304 bits (779), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 141/178 (79%), Positives = 162/178 (91%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 61
MSAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV V+G+ VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 121
TAGQEDY+RLRPLSYRGAD+F+LAFSLIS+ASYENV KKW+PEL+ +AP VPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 122 DLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179
DLR+D+ +F DH G+ IT+A+GEEL+K IGA AYIECSSKTQ+NVK VFD AI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVL 178
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 304 bits (779), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 141/178 (79%), Positives = 162/178 (91%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 61
MSAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV V+G+ VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 121
TAGQEDY+RLRPLSYRGAD+F+LAFSLIS+ASYENV KKW+PEL+ +AP VPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 122 DLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179
DLR+D+ +F DH G+ IT+A+GEEL+K IGA AYIECSSKTQ+NVK VFD AI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVL 178
>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |
RAC-like 6 | chr4:17024051-17025514 REVERSE LENGTH=197
Length = 197
Score = 301 bits (770), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 139/178 (78%), Positives = 161/178 (90%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 61
MSAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV V+G+ VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 121
TAGQEDY+RLRPLSYRGAD+F+LAFSLIS+ASYENV KKW+PEL+ +AP VPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 122 DLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179
DLR+D+ +F DH G+ IT+ +GEEL+K IGA AYIECSSK+Q+NVK VFD AI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 178
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-like 9
| chr2:18429276-18430636 FORWARD LENGTH=209
Length = 209
Score = 287 bits (735), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 137/195 (70%), Positives = 160/195 (82%), Gaps = 4/195 (2%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWDTAGQE 66
FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNF+ANV VDG VNLGLWDTAGQE
Sbjct: 18 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQE 77
Query: 67 DYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRED 126
DY+R+RPLSYRGAD+F+LAFSLISR S+EN+ KKW+PELR +AP VPIVLVGTK DLR++
Sbjct: 78 DYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELRHYAPTVPIVLVGTKSDLRDN 137
Query: 127 RGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKE 186
+ ++ G+ I +G+ELRK+IGA AYIECSSK Q NVKAVFD AIKVVL PP +
Sbjct: 138 MQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAIKVVLHPPSK-- 195
Query: 187 MASKKRHRRSGCSFV 201
+KKR R+ G V
Sbjct: 196 --TKKRKRKIGLCHV 208
>AT3G51290.2 | Symbols: | Protein of unknown function (DUF630)
;Protein of unknown function (DUF632) |
chr3:19039980-19044215 FORWARD LENGTH=798
Length = 798
Score = 253 bits (646), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 115/145 (79%), Positives = 132/145 (91%)
Query: 35 DYIPTVFDNFSANVAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASY 94
DY+PTVFDNFSANV V+GS VNLGLWDTAGQEDY+RLRPLSYRGAD+F+LAFSLIS+ASY
Sbjct: 635 DYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 694
Query: 95 ENVLKKWMPELRRFAPNVPIVLVGTKLDLREDRGYFADHMGSNVITSAEGEELRKQIGAA 154
ENV KKW+PEL+ +AP VPIVLVGTKLDLR+D+ +F DH G+ IT+A+GEELRKQIGA
Sbjct: 695 ENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAP 754
Query: 155 AYIECSSKTQQNVKAVFDTAIKVVL 179
YIECSSKTQ+NVKAVFD AI+VVL
Sbjct: 755 TYIECSSKTQENVKAVFDAAIRVVL 779
>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988839 REVERSE LENGTH=211
Length = 211
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 15/180 (8%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VAVDGSIVNLGLW 60
MS K + +GD VGK+C+L+ +T +F + T+ F A V VDG + L +W
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60
Query: 61 DTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGT 119
DTAGQE + + YRGA +L + + R ++ N L W+ + R+ A PN+ I+L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETF-NHLASWLEDARQHANPNMSIMLIGN 119
Query: 120 KLDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF-DTAIKVV 178
K DL R ++ EG++ K+ G ++E S++T QNV+ F +TA K++
Sbjct: 120 KCDLAHKR----------AVSKEEGQQFAKEHG-LLFLEASARTAQNVEEAFIETAAKIL 168
>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
ATRAB-B1B, RAB-B1B | RAB GTPase homolog B1C |
chr4:9644908-9646220 REVERSE LENGTH=211
Length = 211
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VAVDGSIVNLGLW 60
MS + K + +GD VGK+C+L+ +T +F + T+ F A + +D + L +W
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGT 119
DTAGQE + + YRGA +L + + R ++ N L W+ + R+ A N+ I+L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETF-NHLASWLEDARQHANANMTIMLIGN 119
Query: 120 KLDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
K DL R +++ EGE+ K+ G ++E S+KT QNV+ F
Sbjct: 120 KCDLAHRR----------AVSTEEGEQFAKEHG-LIFMEASAKTAQNVEEAF 160
>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-related
small GTP-binding family protein |
chr3:20318597-20320782 FORWARD LENGTH=202
Length = 202
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 99/177 (55%), Gaps = 15/177 (8%)
Query: 8 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAV-DGSIVNLGLWDTAGQ 65
+K V +GD VGK+C+++ + +F TV +F S +A+ D + V +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRF-APNVPIVLVGTKLDLR 124
E YS L PL YRGA + V+ + + S S++ + W+ EL++ +P++ + LVG K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKKA-QYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 181
E R + + +G EL ++ G +IE S+KT N+ +F+ K + +P
Sbjct: 153 EKRE----------VPTEDGMELAEKNG-MFFIETSAKTADNINQLFEEIGKRLPRP 198
>AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-binding
family protein | chr3:20318597-20320737 FORWARD
LENGTH=193
Length = 193
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 95/168 (56%), Gaps = 15/168 (8%)
Query: 8 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAV-DGSIVNLGLWDTAGQ 65
+K V +GD VGK+C+++ + +F TV +F S +A+ D + V +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRF-APNVPIVLVGTKLDLR 124
E YS L PL YRGA + V+ + + S S++ + W+ EL++ +P++ + LVG K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKKA-QYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFD 172
E R + + +G EL ++ G +IE S+KT N+ +F+
Sbjct: 153 EKRE----------VPTEDGMELAEKNG-MFFIETSAKTADNINQLFE 189
>AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,
RABC2A | RAB GTPase homolog C2A | chr5:885741-887061
REVERSE LENGTH=210
Length = 210
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 28/206 (13%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGSIVNLGLWDTAGQED 67
K + +GD VGK+ +L+ + S+ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLVSFISSSVE-DLAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQER 73
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIV--LVGTKLDLRE 125
+ L YRGA +L + + R ++ N++ W E+ ++ N V LVG K+D
Sbjct: 74 FRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVDRES 133
Query: 126 DRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDT-AIKVVLQPP-- 182
+RG ++ EG L K++ ++ECS++T+QNV+ F+ A+K++ P
Sbjct: 134 ERG----------VSREEGIALAKELN-CMFLECSARTRQNVEQCFEELALKIMEVPSLL 182
Query: 183 -------RRKEMASKKRHR---RSGC 198
+R + K H+ +SGC
Sbjct: 183 EEGSSAVKRNILKQKPEHQTNTQSGC 208
>AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
IK + +GD VGK+C+L+ ++ F T +I T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAP-NVPIVLVGTKLDLR 124
E + + YRGA +L + + +S+ N+ + W+ + + A NV +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
E + + +A+G+ L + G + E S+KT NV+ VF
Sbjct: 134 ESK---------RAVPTAKGQALADEYG-IKFFETSAKTNLNVEEVF 170
>AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
IK + +GD VGK+C+L+ ++ F T +I T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAP-NVPIVLVGTKLDLR 124
E + + YRGA +L + + +S+ N+ + W+ + + A NV +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
E + + +A+G+ L + G + E S+KT NV+ VF
Sbjct: 134 ESK---------RAVPTAKGQALADEYG-IKFFETSAKTNLNVEEVF 170
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | RAB
GTPase homolog 8A | chr3:16917908-16919740 FORWARD
LENGTH=216
Length = 216
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
IK + +GD VGK+C+L+ ++ F T +I T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAP-NVPIVLVGTKLDLR 124
E + + YRGA +L + + +S+ N+ + W+ + + A NV +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
E + + +A+G+ L + G + E S+KT NV+ VF
Sbjct: 134 ESK---------RAVPTAKGQALADEYG-IKFFETSAKTNLNVEEVF 170
>AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C |
chr4:18506112-18507459 FORWARD LENGTH=214
Length = 214
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 15/166 (9%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVAVDGSIVNLGLWDTAGQED 67
K V +GD +VGKT ++ + +KF T Y PT+ D S + ++ V L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRF--APNVPIVLVGTKLDLRE 125
+ L P R + + ++ + + +R ++ N KW+ ++ R NV IVLVG K DL E
Sbjct: 71 FRSLIPSYIRDSSVAIVVYDVSNRQTFLNT-SKWIEDVHRERGQSNVIIVLVGNKTDLVE 129
Query: 126 DRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
R ++ +EGE+ K+ G +IE S+K N+KA+F
Sbjct: 130 KRQ----------VSISEGEDKGKEYG-VMFIETSAKENFNIKALF 164
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RAB homolog 1 |
chr5:18244495-18246060 FORWARD LENGTH=200
Length = 200
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 18/167 (10%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKF---PTDYIPTVFDNFSANVAVDGSIVNLGLWDTAGQ 65
K V +GD GK+ +++ + ++F I F FS +AV+ + V +WDTAGQ
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 69
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELR-RFAPNVPIVLVGTKLDLR 124
E Y L P+ YRGA ++ F + ++AS+E KKW+ EL+ + PN+ + L G K DL
Sbjct: 70 ERYHSLAPMYYRGAAAAIIVFDITNQASFERA-KKWVQELQAQGNPNMVMALAGNKADLL 128
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
+ R SAE E+ Q + ++E S+KT NVK +F
Sbjct: 129 DARK-----------VSAEEAEIYAQENSLFFMETSAKTATNVKDIF 164
>AT5G59840.1 | Symbols: | Ras-related small GTP-binding family
protein | chr5:24107450-24109049 REVERSE LENGTH=216
Length = 216
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
IK + +GD VGK+C+L+ ++ F T +I T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAP-NVPIVLVGTKLDLR 124
E + + YRGA +L + + +S+ N+ + W+ + + A NV +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
E + + ++G+ L + G + E S+KT NV+ VF + K + Q
Sbjct: 134 ESK---------RAVPKSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIAKDIKQ 179
>AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPase
homolog G3B | chr1:8049247-8050494 FORWARD LENGTH=203
Length = 203
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
+K + +GD VGKT ++ Y +NKF Y T+ +F + + +D +V L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAPN----VPIVLVGTK 120
E + L YRGAD VL + + S+E+ L W E L R +P P +L+G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNHLKSFES-LDNWHNEFLTRASPRDPMAFPFILLGNK 126
Query: 121 LDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
+D+ D S V++ + E + G Y E S+K NV F K+ L
Sbjct: 127 VDI--------DGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALA 178
Query: 181 PPRRKEMASKKR-----HRRSGCS 199
R +++ + +R GC+
Sbjct: 179 NERDQDIYFQPDTGSVPEQRGGCA 202
>AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A |
chr1:27687033-27687987 FORWARD LENGTH=233
Length = 233
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGSIVNLGLWDTAGQ 65
K V +GD AVGK+ +L ++ ++F D PT+ F+ NV V I+ +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQ 72
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E + + YRGA +L + + R +++N+ KKW+ ELR FA P +VLVG K DLR
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRTTFDNI-KKWLFELRDFANPETVVVLVGNKSDLR 131
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
+ R D EG+ L + G ++E S+ NV+ F
Sbjct: 132 QSREVEED----------EGKTLAESEG-LYFLETSALENVNVEEAF 167
>AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |
RAB GTPase homolog G3F | chr3:6484266-6486005 FORWARD
LENGTH=206
Length = 206
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
+K + +GD VGKT ++ Y + KF Y T+ +F + V + + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAP----NVPIVLVGTK 120
E + L YRGAD VL + + S S+EN L W E L + +P N P VL+G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFEN-LNNWREEFLIQASPSDPENFPFVLIGNK 126
Query: 121 LDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
+D+ D S V++ + + G Y E S+K NV+ F K L+
Sbjct: 127 VDV--------DDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALK 178
Query: 181 PPRRKEM--------ASKKRHRRSGC 198
+E+ + + R +GC
Sbjct: 179 SGEEEELYLPDTIDVGTSNQQRSTGC 204
>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase
homolog B1A | chr4:9641980-9643541 REVERSE LENGTH=205
Length = 205
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 14/172 (8%)
Query: 2 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLW 60
MS + K + +GD VGK+C+L+ +T +F + T+ F A + +D + L +W
Sbjct: 1 MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60
Query: 61 DTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGT 119
DTAGQE + + YRG +L + + R ++ N L W+ E R+ A N+ +L+G
Sbjct: 61 DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETF-NHLASWLEEARQHASENMTTMLIGN 119
Query: 120 KLDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
K DL + R +++ EGE+ ++ G ++E S+KT NV+ F
Sbjct: 120 KCDLEDKR----------TVSTEEGEQFAREHG-LIFMEASAKTAHNVEEAF 160
>AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
IK + +GD VGK+C+L+ ++ F T +I T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPN-VPIVLVGTKLDLR 124
E + + YRGA +L + + +S+ N+ + W+ + + A + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
E + + ++G+ L + G + E S+KT NV+ VF + K + Q
Sbjct: 134 ESK---------RAVPKSKGQALADEYG-MKFFETSAKTNLNVEEVFFSIAKDIKQ 179
>AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
IK + +GD VGK+C+L+ ++ F T +I T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPN-VPIVLVGTKLDLR 124
E + + YRGA +L + + +S+ N+ + W+ + + A + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
E + + ++G+ L + G + E S+KT NV+ VF + K + Q
Sbjct: 134 ESK---------RAVPKSKGQALADEYG-MKFFETSAKTNLNVEEVFFSIAKDIKQ 179
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTPase
homolog 8 | chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
IK + +GD VGK+C+L+ ++ F T +I T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPN-VPIVLVGTKLDLR 124
E + + YRGA +L + + +S+ N+ + W+ + + A + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
E + + ++G+ L + G + E S+KT NV+ VF + K + Q
Sbjct: 134 ESK---------RAVPKSKGQALADEYG-MKFFETSAKTNLNVEEVFFSIAKDIKQ 179
>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5
| RAS 5 | chr1:400350-401788 REVERSE LENGTH=203
Length = 203
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 28/174 (16%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K + +GD VGK+C+L+ ++ + + YI T+ +F V DG + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAP-NVPIVLVGTKLDLR 124
E + + YRGA ++ + + S+ NV K+W+ E+ R+A NV +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKSDLT 126
Query: 125 EDRGY-------FADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
E+R FAD +G ++E S+K NV+ F
Sbjct: 127 ENRAIPYETAKAFADEIG------------------IPFMETSAKDATNVEQAF 162
>AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VAVDGSIVNLGLWDTAGQ 65
K + +GD VGK+ +L+ +TSN F D PT+ +F + + + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIV--LVGTKLDL 123
E + L YRGA ++ + + R ++ N+ W E+ ++ N + LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 124 REDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPP 182
+R ++ EG + ++ G ++ECS+KT+ NV+ F+ + +L+ P
Sbjct: 132 ESERA----------VSKKEGIDFAREYG-CLFLECSAKTRVNVEQCFEELVLKILETP 179
>AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VAVDGSIVNLGLWDTAGQ 65
K + +GD VGK+ +L+ +TSN F D PT+ +F + + + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIV--LVGTKLDL 123
E + L YRGA ++ + + R ++ N+ W E+ ++ N + LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 124 REDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPP 182
+R ++ EG + ++ G ++ECS+KT+ NV+ F+ + +L+ P
Sbjct: 132 ESERA----------VSKKEGIDFAREYG-CLFLECSAKTRVNVEQCFEELVLKILETP 179
>AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VAVDGSIVNLGLWDTAGQ 65
K + +GD VGK+ +L+ +TSN F D PT+ +F + + + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIV--LVGTKLDL 123
E + L YRGA ++ + + R ++ N+ W E+ ++ N + LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 124 REDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPP 182
+R ++ EG + ++ G ++ECS+KT+ NV+ F+ + +L+ P
Sbjct: 132 ESERA----------VSKKEGIDFAREYG-CLFLECSAKTRVNVEQCFEELVLKILETP 179
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RAB
GTPase homolog A2B | chr1:2276270-2277154 FORWARD
LENGTH=214
Length = 214
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 14/187 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K V +GD VGK+ +L +T N+F + T+ F+ + V+G V +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + R ++ENVL +W+ ELR A N+ I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENVL-RWLRELRDHADSNIVIMMAGNKSDLN 130
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
R AD G ++ AE E L +++E S+ N++ F T + + +
Sbjct: 131 HLRS-VADEDGRSL---AEKEGL-------SFLETSALEATNIEKAFQTILSEIYHIISK 179
Query: 185 KEMASKK 191
K +A+++
Sbjct: 180 KALAAQE 186
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase
homolog 1C | chr4:9773721-9775424 REVERSE LENGTH=202
Length = 202
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 24/204 (11%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K + +GD VGK+C+L+ + + + YI T+ +F V DG + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E + + YRGA ++ + + S+ NV K+W+ E+ R+A NV +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKCDLT 126
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF---DTAIKVVL-- 179
+ V+++ + ++G ++E S+K NV+ F AIK +
Sbjct: 127 SQK----------VVSTETAKAFADELG-IPFLETSAKNATNVEEAFMAMTAAIKTRMAS 175
Query: 180 QP-----PRRKEMASKKRHRRSGC 198
QP P ++ + +++SGC
Sbjct: 176 QPAGGSKPPTVQIRGQPVNQQSGC 199
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase
homolog 1A | chr5:19167029-19168718 FORWARD LENGTH=202
Length = 202
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 24/204 (11%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K + +GD VGK+C+L+ + + + YI T+ +F V DG + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E + + YRGA ++ + + S+ NV K+W+ E+ R+A NV +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKNDLT 126
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF---DTAIKVVL-- 179
+ V+++ + ++G ++E S+K NV+ F AIK +
Sbjct: 127 SQK----------VVSTETAKAFADELG-IPFLETSAKNATNVEEAFMAMTAAIKTRMAS 175
Query: 180 QP-----PRRKEMASKKRHRRSGC 198
QP P ++ + +++SGC
Sbjct: 176 QPAGGAKPPTVQIRGQPVNQQSGC 199
>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding
family protein | chr4:10687441-10689449 REVERSE
LENGTH=200
Length = 200
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKF---PTDYIPTVFDNFSANVAVDGSIVNLGLWDTAGQ 65
K V +GD GK+ +++ + ++F I F FS +AV+ + V +WDTAGQ
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 69
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELR-RFAPNVPIVLVGTKLDLR 124
E Y L P+ YRGA ++ F + ++AS+E KKW+ EL+ + PN+ + L G K DL
Sbjct: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNKSDLL 128
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
+ R +AE + Q ++E S+KT NVK +F
Sbjct: 129 DARK-----------VTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164
>AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog
A1B | chr1:5787489-5789147 REVERSE LENGTH=216
Length = 216
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 14/185 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K V +GD VGK+ +L +T N+F + T+ F+ + VDG +V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQ 72
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + RA++ENV +W+ EL+ PN+ ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENV-DRWLKELKNHTDPNIVVMLVGNKSDLR 131
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
H+ + + + +G+ +Q + ++E S+ NV+ F + + + +
Sbjct: 132 --------HLLA--VPTEDGKSYAEQ-ESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 185 KEMAS 189
K++ +
Sbjct: 181 KQVEA 185
>AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase
homolog G3C | chr3:5459270-5460556 FORWARD LENGTH=206
Length = 206
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
+K + +GD VGKT ++ + + KF Y T+ +F + V +D I L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAP----NVPIVLVGTK 120
E + L YRGAD VL + S+EN L W E L + +P N P V++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVNDVNVMKSFEN-LNNWREEFLIQASPSDPENFPFVVLGNK 126
Query: 121 LDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
D+ D S V+T + + G Y E S+K NV A F+ K L+
Sbjct: 127 TDV--------DGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALK 178
Query: 181 P--------PRRKEMASKKRHRRSGCS 199
P ++A ++ R +GC
Sbjct: 179 NEPEEEVYLPDTIDVAGARQQRSTGCE 205
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small
GTP-binding family protein | chr3:3709490-3711397
REVERSE LENGTH=205
Length = 205
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K + +GD +VGK+C+L+ + + + YI T+ +F + DG + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E + + YRGA ++ + S+ NV K+W+ E+ R+A +V +L+G K D+
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDCTEMESFNNV-KQWLSEIDRYANESVCKLLIGNKNDMV 126
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
E S V+++ G L ++G ++E S+K NV+ F + + +
Sbjct: 127 E----------SKVVSTETGRALADELG-IPFLETSAKDSINVEQAF-----LTIAGEIK 170
Query: 185 KEMASKKRHRRS 196
K+M S+ ++
Sbjct: 171 KKMGSQTNANKT 182
>AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B |
chr1:6265416-6266659 REVERSE LENGTH=229
Length = 229
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGSIVNLGLWDTAGQ 65
K V +GD AVGK+ +L ++ ++F D PT+ +F+ NV V + +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQ 72
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRF-APNVPIVLVGTKLDLR 124
E + + YRGA +L + + R +++N+ +KW+ ELR F +P +VLVG K DL
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRITFKNI-EKWLSELRGFSSPETVVVLVGNKSDLG 131
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAI 175
+ R + EG+ L + G ++E S+ QNV+ F + I
Sbjct: 132 QSRE----------VEEEEGKTLAESEG-LYFLETSALENQNVEEAFLSMI 171
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase
homolog A2D | chr5:23876858-23878244 FORWARD LENGTH=217
Length = 217
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 14/181 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K V +GD VGKT +L +T N+F + T+ F+ + V+G V +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + R +++NVL +W+ ELR A N+ I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMAGNKADL- 129
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
+H+ S + +G+ L + G +++E S+ NV+ F T + + +
Sbjct: 130 -------NHLRS--VAEEDGQTLAETEG-LSFLETSALEATNVEKAFQTVLAEIYHIISK 179
Query: 185 K 185
K
Sbjct: 180 K 180
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A,
RAB11c | RAB GTPase 11C | chr1:3118350-3119571 REVERSE
LENGTH=217
Length = 217
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K V +GD VGK+ +L +T N+F + T+ F+ + V+G V +WDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + ++ENV +W+ ELR A N+ I+L+G K DL+
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENV-SRWLKELRDHADSNIVIMLIGNKTDLK 130
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
R + S AE E L ++IE S+ NV+ F T + V + +
Sbjct: 131 HLRAVATEDAQS----YAEKEGL-------SFIETSALEALNVEKAFQTILSEVYRIISK 179
Query: 185 KEMASKK 191
K ++S +
Sbjct: 180 KSISSDQ 186
>AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D |
chr1:19468150-19469449 REVERSE LENGTH=206
Length = 206
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
+K + +GD VGKT ++ + + KF Y T+ +F + V +D I L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAP----NVPIVLVGTK 120
E + L YRGAD VL + + S++N L W E L + +P N P V++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDN-LNNWREEFLIQASPSDPENFPFVVLGNK 126
Query: 121 LDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
D+ D S V++ + + G Y E S+K NV A F+ K +
Sbjct: 127 TDV--------DGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFK 178
Query: 181 P--------PRRKEMASKKRHRRSGCS 199
P ++A ++ R +GC
Sbjct: 179 NEPEEEPYLPDTIDVAGGQQQRSTGCE 205
>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RABH1d
| RAB GTPase homolog H1D | chr2:9466568-9467688 FORWARD
LENGTH=207
Length = 207
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVAVDGSIVNLGLWDTAGQED 67
K V +GD +VGKT ++ + +KF T Y T+ D S + ++ V L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELR-RFAPNVPIVLVGTKLDLRED 126
+ L P R + + V+ + + +R S+ N KW+ E+R A +V IVLVG K DL E
Sbjct: 71 FRSLIPSYIRDSSVAVVVYDVANRLSFLNT-SKWIEEVRNERAGDVIIVLVGNKTDLVEK 129
Query: 127 RGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
R ++ EG+ ++ G +IE S+K N+K +F
Sbjct: 130 RQ----------VSIEEGDSKGREYG-VMFIETSAKAGFNIKPLF 163
>AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=206
Length = 206
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 1 MMSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVAVDGSIVNLGL 59
M K K V +GD VGKT ++ C+ KF T Y T+ D S + L L
Sbjct: 1 MGDLGKGYKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQL 60
Query: 60 WDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELR-RFAPNVPIVLVG 118
WDTAGQE + L P R + + V+ + + S+ S+ N KW+ E+R V IVLVG
Sbjct: 61 WDTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINT-SKWIEEVRAERGSYVIIVLVG 119
Query: 119 TKLDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
K DL R ++ EGE ++ G A ++E S+K N+K +F
Sbjct: 120 NKTDLVNKRQ----------VSIEEGENKAREFG-ALFMETSAKAGFNIKPLF 161
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C,
RABA2c | RAB GTPase homolog A2C | chr3:17246699-17248362
REVERSE LENGTH=217
Length = 217
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 14/181 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVA-VDGSIVNLGLWDTAGQ 65
K V +GD VGK+ +L +T N+F + T+ F+ V+G + +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQ 71
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + R +++NVL +W+ ELR A N+ I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMAGNKSDL- 129
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
+H+ S + +G+ L ++ G +++E S+ NV+ F T + + +
Sbjct: 130 -------NHLRS--VAEEDGQSLAEKEG-LSFLETSALEATNVEKAFQTILGEIYHIISK 179
Query: 185 K 185
K
Sbjct: 180 K 180
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase
homolog E1E | chr3:3034687-3036379 FORWARD LENGTH=218
Length = 218
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
IK + +GD VGK+C+L+ ++ + F T +I T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPN-VPIVLVGTKLDLR 124
E + + YRGA +L + + +S+ N+ + WM + + A + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDSVNKILVGNKADMD 133
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
E + + +++G+ L + G + E S+KT QNV+ VF + K + Q
Sbjct: 134 ESK---------RAVPTSKGQALADEYG-IKFFETSAKTNQNVEQVFLSIAKDIKQ 179
>AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E |
chr4:10183903-10185223 REVERSE LENGTH=217
Length = 217
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K V +GD VGK+ +L +T N+F + T+ F+ +V VD I+ LWDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQ 72
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + ++ENV ++W+ ELR NV I+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDITRHITFENV-ERWLKELRDHTDANVVIMLVGNKADLR 131
Query: 125 EDRG 128
R
Sbjct: 132 HLRA 135
>AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C |
chr5:18559318-18560639 FORWARD LENGTH=216
Length = 216
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K V +GD VGK+ +L +T N+F + T+ F+ ++ VD ++ +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + +++ENV + W+ ELR PN+ ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ETWLKELRNHTDPNIVVMLVGNKSDLR 131
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
+ + + AE E L ++E S+ NV+ F + + +
Sbjct: 132 ----HLVAVQTEDAKSFAEKESLY-------FMETSALEATNVENAFAEVLTQIHHIVSK 180
Query: 185 KEM 187
K M
Sbjct: 181 KAM 183
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB
GTPase homolog A4B | chr4:18542722-18543779 FORWARD
LENGTH=224
Length = 224
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 14/184 (7%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQED 67
K V +GD AVGK+ +L + ++F D T+ F ++++ + +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQER 78
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLRED 126
Y + YRGA +L + + R ++E++ +W+ ELR A N+ I+L+G K DL +
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDMTKRETFEHI-PRWLEELRAHADKNIVIILIGNKSDLEDQ 137
Query: 127 RGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKE 186
R + + + +E ++ G ++E S+ NV+ F+T + + +K
Sbjct: 138 RA----------VPTEDAKEFAEKEG-LFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186
Query: 187 MASK 190
+AS+
Sbjct: 187 LASE 190
>AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A |
chr5:19277596-19278366 REVERSE LENGTH=221
Length = 221
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 14/200 (7%)
Query: 3 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWD 61
S K V +GD AVGK+ +L + ++F + T+ F + + ++G + +WD
Sbjct: 10 SEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWD 69
Query: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAP-NVPIVLVGTK 120
TAGQE + + YRGA +L + + R ++ ++ +W+ EL + NV +LVG K
Sbjct: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSI-GRWLNELHTHSDMNVVTILVGNK 128
Query: 121 LDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
DL++ R +++AEG+ L + G ++E S+ NV A F+T +K +
Sbjct: 129 SDLKDLRE----------VSTAEGKALAEAQG-LFFMETSALDSSNVAAAFETVVKEIYN 177
Query: 181 PPRRKEMASKKRHRRSGCSF 200
RK M+S++ +++ S
Sbjct: 178 ILSRKVMSSQELNKQDPASL 197
>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related
small GTP-binding family protein |
chr2:18411778-18413883 REVERSE LENGTH=208
Length = 208
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVAVDGSIVNLGLWDTAGQED 67
K V +GD +VGKT ++ + +KF Y T+ D S + ++ V L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELR-RFAPNVPIVLVGTKLDLRED 126
+ L P R + + V+ + + SR S+ N KW+ E+R +V +VLVG K DL +
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNT-TKWIDEVRTERGSDVIVVLVGNKTDLVDK 129
Query: 127 RGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKE 186
R S E E + + +IE S+K N+KA+F K+ P +
Sbjct: 130 RQ-----------VSIEEAEAKARELNVMFIETSAKAGFNIKALFR---KIAAALPGMET 175
Query: 187 MASKKRH---------RRSGCSFVGIVCGGCA 209
++S K+ + S GGC+
Sbjct: 176 LSSTKQEDMVDVNLKSSNANASLAQQQSGGCS 207
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883679-885158 FORWARD
LENGTH=216
Length = 216
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
IK + +GD VGK+C+L+ ++ + F T +I T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAP-NVPIVLVGTKLDLR 124
E + + YRGA +L + + +S+ N+ + WM + + A NV +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDNVNKILVGNKADMD 133
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
E + + +A+G+ L + G + E S+KT NV+ VF + K + Q
Sbjct: 134 ESK---------RAVPTAKGQALADEYG-IKFFETSAKTNLNVENVFMSIAKDIKQ 179
>AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homolog
7A | chr2:9324899-9326170 REVERSE LENGTH=212
Length = 212
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
+K + +GD VGKT ++ Y KF Y T+ +F + + +D V L +WDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQ 68
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAP----NVPIVLVGTK 120
E + L YRGAD VL + + + S+E L W E L++ P P VL+G K
Sbjct: 69 ERFQSLGAAFYRGADCCVLVYDVNNLKSFE-TLNNWHTEFLKQANPMEPETFPFVLIGNK 127
Query: 121 LDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
D+ D S V+++ E G Y E S+K N+ F + + L
Sbjct: 128 TDV--------DGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALS 179
Query: 181 PPRRK 185
R++
Sbjct: 180 NERKQ 184
>AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G |
chr3:5069239-5070025 FORWARD LENGTH=217
Length = 217
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQED 67
K V +GD VGK+ +L +T N+F + T+ F+ ++ VD IV +WDTAGQE
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQER 74
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAP-NVPIVLVGTKLDLRED 126
Y + YRGA +L + + ++ENV ++W+ ELR N+ I+LVG K DLR
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTEANIVIMLVGNKADLRHL 133
Query: 127 RG 128
R
Sbjct: 134 RA 135
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB
GTPase homolog A1D | chr4:10320156-10321339 REVERSE
LENGTH=214
Length = 214
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K V +GD VGK+ +L +T N+F + T+ F+ ++ V+ ++ +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQ 72
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + +++ENV ++W+ ELR PN+ ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLRELRDHTDPNIVVMLVGNKSDLR 131
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
+ + + AE E L ++E S+ NV+ F + + +
Sbjct: 132 ----HLVAVQTEDAKSFAENESL-------YFMETSALESTNVENAFSEVLTQIYHVVSK 180
Query: 185 KEM 187
K M
Sbjct: 181 KAM 183
>AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A |
chr5:26083437-26084550 FORWARD LENGTH=226
Length = 226
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 14/185 (7%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQED 67
K V +GD AVGK+ +L Y ++F D T+ F + +D V +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQER 78
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLRED 126
Y + YRGA +L + + R +++++ +W+ ELR A N+ I+L+G K DL +
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDITRRQTFDHI-PRWLEELRAHADKNIVIILIGNKSDLVDQ 137
Query: 127 RGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKE 186
R I + + +E ++ G ++E S+ NV++ F T + + +K
Sbjct: 138 RA----------IPTEDAKEFAEKEG-LFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186
Query: 187 MASKK 191
+A+ +
Sbjct: 187 LAASE 191
>AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F |
chr5:24484750-24485565 FORWARD LENGTH=217
Length = 217
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K V +GD VGK+ +L +T N+F + T+ F+ ++ VD IV +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + ++ENV ++W+ ELR N+ I+ VG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMFVGNKADLR 131
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
R S E + + ++E S+ NV+ F + + + R
Sbjct: 132 HLRA-----------VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180
Query: 185 KEM 187
K +
Sbjct: 181 KAL 183
>AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
+K + +GD VGKT ++ Y + KF Y T+ +F + V + + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAP----NVPIVLVGTK 120
E + L YRGAD VL + + S S+E+ L W E L + +P N P V++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFED-LNNWREEFLIQASPSDPENFPFVVIGNK 126
Query: 121 LDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
+D+ D S V++ + G Y E S+K NV+ F ++
Sbjct: 127 IDV--------DGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMK 178
Query: 181 PPRRKEM--------ASKKRHRRSGC 198
+EM + R +GC
Sbjct: 179 SGEEEEMYLPDTIDVGTSNPQRSTGC 204
>AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
+K + +GD VGKT ++ Y + KF Y T+ +F + V + + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAP----NVPIVLVGTK 120
E + L YRGAD VL + + S S+E+ L W E L + +P N P V++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFED-LNNWREEFLIQASPSDPENFPFVVIGNK 126
Query: 121 LDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
+D+ D S V++ + G Y E S+K NV+ F ++
Sbjct: 127 IDV--------DGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMK 178
Query: 181 PPRRKEM--------ASKKRHRRSGC 198
+EM + R +GC
Sbjct: 179 SGEEEEMYLPDTIDVGTSNPQRSTGC 204
>AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E |
chr5:3219991-3221301 FORWARD LENGTH=207
Length = 207
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 17/187 (9%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVAVDGSIVNLGLWDTAGQED 67
K V +GD +VGKT ++ + +KF T Y T+ D S + ++ V L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELR-RFAPNVPIVLVGTKLDLRED 126
+ L P R + + V+ + + +R S+ N KW+ ++R +V IVLVG K DL +
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNT-SKWIEDVRTERGSDVIIVLVGNKTDLVDK 129
Query: 127 RGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKE 186
R ++ EG+ + G +IE S+K N+K +F K+ P +
Sbjct: 130 RQ----------VSIEEGDNKARDYG-VIFIETSAKAGFNIKPLFR---KIAAALPGMET 175
Query: 187 MASKKRH 193
++S K+
Sbjct: 176 LSSTKQE 182
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 |
Ras-related small GTP-binding family protein |
chr1:1951089-1952686 REVERSE LENGTH=216
Length = 216
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVA-VDGSIVNLGLWDTAGQ 65
K V +GD VGK+ +L +T N+F + T+ F+ V+G +V +WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQ 72
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + A++EN +W+ ELR PN+ ++L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLIYDVTRHATFENA-ARWLRELRGHTDPNIVVMLIGNKCDLR 131
>AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D |
chr2:13473781-13474957 REVERSE LENGTH=219
Length = 219
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 14/185 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
K V +GD AVGK+ +L Y N+F T+ F + N+ ++G V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQ 71
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E + + YRGA ++ + + R+++E+V +W+ EL+ + V +LVG K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDISRRSTFESV-GRWLDELKTHSDTTVARMLVGNKCDLE 130
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
R ++ EG+ L + G ++E S+ NVK F+ I+ + R
Sbjct: 131 SIRA----------VSVEEGKALAETEG-LFFMETSALDSTNVKTAFEMVIRDIYTNISR 179
Query: 185 KEMAS 189
K++ S
Sbjct: 180 KQLNS 184
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D |
chr3:3879495-3880437 REVERSE LENGTH=222
Length = 222
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQED 67
K V +GD AVGKT +L + N+F D T+ F + + +D V +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQER 76
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLRED 126
Y + YRGA +L + + R S+++ + KW+ ELR A N+ I+L+G K DL
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDMTKRQSFDH-MAKWLEELRGHADKNIVIMLIGNKCDL--- 132
Query: 127 RGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKE 186
GS E + Q ++E S+ NV+ F T + + + +K
Sbjct: 133 --------GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKS 184
Query: 187 MAS 189
+ +
Sbjct: 185 LTA 187
>AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=211
Length = 211
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
+K + +GD VGKT ++ Y KF Y T+ +F + + + +V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNV----------PIV 115
E + L YRGAD L + + S++N L+ W E + A N+ P +
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDN-LETWHEEFLKQAWNIGMCPSDPKTFPFI 126
Query: 116 LVGTKLDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAI 175
++G K+D+ D S V++ + + G Y E S+K NV F T
Sbjct: 127 VLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIA 178
Query: 176 KVVLQPPRRKEM 187
K L +++
Sbjct: 179 KTALANEHEQDI 190
>AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=206
Length = 206
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 15/187 (8%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
+K + +GD VGKT ++ Y KF Y T+ +F + + + +V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAPN----VPIVLVGTK 120
E + L YRGAD L + + S++N L+ W E L++ +P+ P +++G K
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDN-LETWHEEFLKQASPSDPKTFPFIVLGNK 126
Query: 121 LDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
+D+ D S V++ + + G Y E S+K NV F T K L
Sbjct: 127 IDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALA 178
Query: 181 PPRRKEM 187
+++
Sbjct: 179 NEHEQDI 185
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
P-loop containing nucleoside triphosphate hydrolases
superfamily protein | chr2:17929899-17930904 REVERSE
LENGTH=214
Length = 214
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 14/185 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
K V +GD AVGK+ +L Y N+F + T+ F + ++ +DG V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQ 71
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E + + YRGA ++ + + +++ENV +W+ EL + V +L+G K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDITRSSTFENV-GRWLDELNTHSDTTVAKMLIGNKCDLE 130
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
R ++ EG+ L + G ++E S+ NVK F+ I+ + R
Sbjct: 131 SIRA----------VSVEEGKSLAESEG-LFFMETSALDSTNVKTAFEMVIREIYSNISR 179
Query: 185 KEMAS 189
K++ S
Sbjct: 180 KQLNS 184
>AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I |
chr1:10036966-10037698 REVERSE LENGTH=218
Length = 218
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K V GD VGK+ +L +T N F D T+ F+ ++ D IV +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + ++ENV ++W+ ELR N+ I+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 131
Query: 125 EDRG 128
R
Sbjct: 132 HLRA 135
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RAB
GTPase homolog A5E | chr1:1748314-1749350 FORWARD
LENGTH=261
Length = 261
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 14/185 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
K V +GD AVGK+ +L Y N+F + T+ F + ++ ++G V +WDTAGQ
Sbjct: 55 LFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQ 114
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E + + YRGA ++ + + R ++E+V +W+ EL+ + V +LVG K DL
Sbjct: 115 ERFRAVTSAYYRGAVGALVVYDITRRTTFESV-GRWLDELKIHSDTTVARMLVGNKCDLE 173
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
R ++ EG+ L ++ G ++E S+ NVK F+ I + R
Sbjct: 174 NIRA----------VSVEEGKALAEEEG-LFFVETSALDSTNVKTAFEMVILDIYNNVSR 222
Query: 185 KEMAS 189
K++ S
Sbjct: 223 KQLNS 227
>AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H |
chr2:14337366-14338251 REVERSE LENGTH=218
Length = 218
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQ 65
K V GD VGK+ +L +T N F D T+ F+ ++ VD IV +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQ 72
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
E Y + YRGA +L + + ++ENV ++W+ ELR N I+LVG K DL
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANTVIMLVGNKADLN 131
Query: 125 EDRG 128
R
Sbjct: 132 HLRA 135
>AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=217
Length = 217
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
+K + +GD VGKT ++ Y KF Y T+ +F + + + +V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNV------------- 112
E + L YRGAD L + + S++N L+ W E + A N+
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDN-LETWHEEFLKQAWNIGMWTIAEASPSDP 126
Query: 113 ---PIVLVGTKLDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKA 169
P +++G K+D+ D S V++ + + G Y E S+K NV
Sbjct: 127 KTFPFIVLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDE 178
Query: 170 VFDTAIKVVLQPPRRKEM 187
F T K L +++
Sbjct: 179 AFLTIAKTALANEHEQDI 196
>AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988587 REVERSE LENGTH=165
Length = 165
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 14/133 (10%)
Query: 48 VAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRR 107
V VDG + L +WDTAGQE + + YRGA +L + + R ++ N L W+ + R+
Sbjct: 2 VTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETF-NHLASWLEDARQ 60
Query: 108 FA-PNVPIVLVGTKLDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQN 166
A PN+ I+L+G K DL R ++ EG++ K+ G ++E S++T QN
Sbjct: 61 HANPNMSIMLIGNKCDLAHKR----------AVSKEEGQQFAKEHG-LLFLEASARTAQN 109
Query: 167 VKAVF-DTAIKVV 178
V+ F +TA K++
Sbjct: 110 VEEAFIETAAKIL 122
>AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=213
Length = 213
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 1 MMSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVAVDGSIVNLGL 59
M K K V +GD VGKT ++ C+ KF T Y T+ D S + L L
Sbjct: 1 MGDLGKGYKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQL 60
Query: 60 W-------DTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELR-RFAPN 111
W DTAGQE + L P R + + V+ + + S+ S+ N KW+ E+R
Sbjct: 61 WYKKLSLGDTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINT-SKWIEEVRAERGSY 119
Query: 112 VPIVLVGTKLDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
V IVLVG K DL R ++ EGE ++ G A ++E S+K N+K +F
Sbjct: 120 VIIVLVGNKTDLVNKRQ----------VSIEEGENKAREFG-ALFMETSAKAGFNIKPLF 168
>AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homolog
A4C | chr5:19421533-19422473 REVERSE LENGTH=223
Length = 223
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQED 67
K V +GD AVGK+ +L ++ N+F + T+ F + +D + +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQER 76
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDL 123
Y + YRGA +L + + R S+++V +W+ ELR A N+ I+L+G K DL
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDITKRQSFDHV-ARWLEELRGHADKNIVIMLIGNKTDL 132
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase
homolog A3 | chr1:86715-88145 REVERSE LENGTH=237
Length = 237
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGSIVNLGLWDTAGQED 67
K V +GD AVGKT +L +T N+F D T+ F + + G +V +WDTAGQE
Sbjct: 30 KVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQER 89
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIV-LVGTKLDL 123
Y + YRGA ++ + + R S+++V +W+ ELR A + ++ LVG K DL
Sbjct: 90 YRAVTSAYYRGALGAMVVYDITKRLSFDHV-ARWVEELRAHADDSAVIMLVGNKADL 145
>AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B |
chr3:2372485-2373482 REVERSE LENGTH=217
Length = 217
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 14/185 (7%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VAVDGSIVNLGLWDTAGQ 65
K V +GD AVGK+ +L ++ ++F T+ T+ F V ++G V +WDTAGQ
Sbjct: 12 LFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQ 71
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPN-VPIVLVGTKLDLR 124
E + + YRGA ++ + + ++E+V K+W+ EL V +LVG K DL
Sbjct: 72 ERFRAVTSAYYRGAFGALIVYDITRGDTFESV-KRWLQELNTHCDTAVAQMLVGNKCDLE 130
Query: 125 EDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRR 184
+ R ++ EG+ L ++ G ++E S+ NV F+ I+ + R
Sbjct: 131 DIRA----------VSVEEGKALAEEEG-LFFMETSALDATNVDKAFEIVIREIFNNVSR 179
Query: 185 KEMAS 189
K + S
Sbjct: 180 KLLNS 184
>AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 4 ASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWDTA 63
+ K ++ V VGD GK+ +++ ++ FP + +P V ++ + + + + DT+
Sbjct: 14 SPKSVRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTS 72
Query: 64 GQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDL 123
+ + + + AD VL ++ + E + + W+PELRR +PI++ G KLD
Sbjct: 73 SRPEDRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDF 132
Query: 124 REDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 181
R+D + + + S ++ R+ IECS+ Q + VF A K VL P
Sbjct: 133 RDDN----NQVSLEQVMSPIMQQFRE---IETCIECSALKQLQAQEVFYYAQKTVLHP 183
>AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 4 ASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWDTA 63
+ K ++ V VGD GK+ +++ ++ FP + +P V ++ + + + + DT+
Sbjct: 14 SPKSVRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTS 72
Query: 64 GQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDL 123
+ + + + AD VL ++ + E + + W+PELRR +PI++ G KLD
Sbjct: 73 SRPEDRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDF 132
Query: 124 REDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 181
R+D + + + S ++ R+ IECS+ Q + VF A K VL P
Sbjct: 133 RDDN----NQVSLEQVMSPIMQQFRE---IETCIECSALKQLQAQEVFYYAQKTVLHP 183
>AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protein 4
| chr5:22351576-22353058 REVERSE LENGTH=222
Length = 222
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 8 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVAVDGSIVNLGLWDTAGQE 66
K + VGDG GKT L + + +F + PT+ D + + + + WDTAGQE
Sbjct: 14 FKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQE 73
Query: 67 DYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDL 123
YS L+ Y ++ F + +R +Y N+ +W +LRR N+PIVL G K+D+
Sbjct: 74 KYSGLKDAYYIHGQCAIIMFDVTARHTYMNI-DRWYRDLRRVCKNIPIVLCGNKVDV 129
>AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGSIVNLGLWDTAGQED 67
K + +GD VGK+ +L+ + S+ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIV--LVGTKLDLRE 125
+ L +RG+ +L + + R ++ N+ W E+ ++ N + LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 126 DRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRK 185
+R ++ EG L K + + ECS++T++NV F+ +++ P
Sbjct: 134 ERK----------VSREEGMALAKDLN-CLFHECSARTRENVNGCFEELALKIMEVPSLL 182
Query: 186 EMASKKRHRR 195
E S R+
Sbjct: 183 EEGSSSVKRK 192
>AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGSIVNLGLWDTAGQED 67
K + +GD VGK+ +L+ + S+ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIV--LVGTKLDLRE 125
+ L +RG+ +L + + R ++ N+ W E+ ++ N + LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 126 DRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRK 185
+R ++ EG L K + + ECS++T++NV F+ +++ P
Sbjct: 134 ERK----------VSREEGMALAKDLN-CLFHECSARTRENVNGCFEELALKIMEVPSLL 182
Query: 186 EMASKKRHRR 195
E S R+
Sbjct: 183 EEGSSSVKRK 192
>AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase
homolog C2B | chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGSIVNLGLWDTAGQED 67
K + +GD VGK+ +L+ + S+ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIV--LVGTKLDLRE 125
+ L +RG+ +L + + R ++ N+ W E+ ++ N + LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 126 DRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRK 185
+R ++ EG L K + + ECS++T++NV F+ +++ P
Sbjct: 134 ERK----------VSREEGMALAKDLN-CLFHECSARTRENVNGCFEELALKIMEVPSLL 182
Query: 186 EMASKKRHRR 195
E S R+
Sbjct: 183 EEGSSSVKRK 192
>AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883713-885158 FORWARD
LENGTH=206
Length = 206
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 48 VAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRR 107
V +DG + L +WDTAGQE + + YRGA +L + + +S+ N+ + WM + +
Sbjct: 47 VELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQ 105
Query: 108 FAP-NVPIVLVGTKLDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQN 166
A NV +LVG K D+ E + + +A+G+ L + G + E S+KT N
Sbjct: 106 HASDNVNKILVGNKADMDESK---------RAVPTAKGQALADEYG-IKFFETSAKTNLN 155
Query: 167 VKAVFDTAIKVVLQ 180
V+ VF + K + Q
Sbjct: 156 VENVFMSIAKDIKQ 169
>AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 |
chr5:22392285-22393957 FORWARD LENGTH=221
Length = 221
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 8 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVAVDGSIVNLGLWDTAGQE 66
K V VGDG GKT + + + +F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 67 DYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRED 126
+ LR Y ++ F + +R +Y+NV W +L R N+PIVL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 127 RGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF---------DTAIKV 177
+ + + +T + L+ Y E S+K+ N + F D +
Sbjct: 133 Q------VKAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPFLYLARKLAGDANLHF 179
Query: 178 V----LQPPRRK-EMASKKRHR 194
V L PP + ++A++++H
Sbjct: 180 VESPALAPPEVQIDLAAQQQHE 201
>AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear
protein 2 | chr5:6762817-6764381 FORWARD LENGTH=221
Length = 221
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 8 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVAVDGSIVNLGLWDTAGQE 66
K V VGDG GKT + + + +F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 67 DYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDLR 124
+ LR Y ++ F + +R +Y+NV W +L R N+PIVL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVK 130
>AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear
protein-1 | chr5:6760364-6761747 FORWARD LENGTH=221
Length = 221
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 8 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVAVDGSIVNLGLWDTAGQE 66
K V VGDG GKT + + + +F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 67 DYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRED 126
+ LR Y ++ F + +R +Y+NV W +L R N+PIVL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 127 RGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVF 171
+ + + +T + L+ Y E S+K+ N + F
Sbjct: 133 Q------VKAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 |
chr3:23329200-23332692 REVERSE LENGTH=643
Length = 643
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 8 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWDTAGQED 67
++ GD GK+ ++ S FP D +P V + + + + DT D
Sbjct: 15 LRVAVAGDKGTGKSSLISAVASETFP-DNVPRVLPPITLPADAFPDYIPITIVDTPSSID 73
Query: 68 YSRLRPLS-YRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRED 126
+R++ + +R AD+ +L ++ ++ + + W+PELRR P+++VG KLDLR++
Sbjct: 74 -NRIKLIEEFRKADVVLLTYACDQPSTLDRLSSYWLPELRRLEIKAPVIVVGCKLDLRDE 132
Query: 127 R--GYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 181
R D M + E E IECS+ T V VF A K VL P
Sbjct: 133 RSPARLEDIMSPIMKEYREIE---------TCIECSALTLIQVPDVFYFASKAVLHP 180
>AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 |
chr5:15864166-15865782 REVERSE LENGTH=204
Length = 204
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 15/183 (8%)
Query: 8 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVF-DNFSANVAVDGSIVNLGLWDTAGQE 66
+K + +GD VGKT +L Y F + T++ D + + + V L +WDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 67 DYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAPNV----PIVLVGTKL 121
+ L YR D VL + + + ++E++ W E +++ P P VL+G K
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESI-DNWHDEFIKQANPETPTKFPFVLMGNKT 124
Query: 122 DLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 181
D+ ++ V+ ++ G Y E S+K + NV+ F K L
Sbjct: 125 DV--------NNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKALTN 176
Query: 182 PRR 184
R+
Sbjct: 177 ERQ 179
>AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133405-6134959 FORWARD LENGTH=172
Length = 172
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 54 IVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAPN- 111
+V L +WDTAGQE + L YRGAD L + + S++N L+ W E L++ +P+
Sbjct: 22 LVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDN-LETWHEEFLKQASPSD 80
Query: 112 ---VPIVLVGTKLDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVK 168
P +++G K+D+ D S V++ + + G Y E S+K NV
Sbjct: 81 PKTFPFIVLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVD 132
Query: 169 AVFDTAIKVVLQPPRRKEM 187
F T K L +++
Sbjct: 133 EAFLTIAKTALANEHEQDI 151
>AT2G21880.2 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homolog
7A | chr2:9324899-9326170 REVERSE LENGTH=204
Length = 204
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGSIVNLGLWDTAGQ 65
+K + +GD VGKT ++ Y KF Y T+ +F + + +D V L
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTL-------- 60
Query: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAP----NVPIVLVGTK 120
+ + L YRGAD VL + + + S+E L W E L++ P P VL+G K
Sbjct: 61 QRFQSLGAAFYRGADCCVLVYDVNNLKSFE-TLNNWHTEFLKQANPMEPETFPFVLIGNK 119
Query: 121 LDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
D+ D S V+++ E G Y E S+K N+ F + + L
Sbjct: 120 TDV--------DGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALS 171
Query: 181 PPRRK 185
R++
Sbjct: 172 NERKQ 176
>AT3G05310.1 | Symbols: MIRO3 | MIRO-related GTP-ase 3 |
chr3:1510160-1513301 FORWARD LENGTH=648
Length = 648
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 4 ASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV--FDNFSANVAVDGSIVNLGLWD 61
+ K I+ V VG+ GK+ +++ N F + IP++ + N + D + + D
Sbjct: 11 SPKPIRIVVVGEKGSGKSSLIMAAARNTFHPN-IPSLLPYTNLPSEFFPDR--IPATVID 67
Query: 62 TAGQ-EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTK 120
T+ + ED ++ R AD VL F+ + + + K W+P R+ VPI++ G +
Sbjct: 68 TSSRPEDKGKVVK-EVRQADAIVLTFAFDRPETLDRLSKYWLPLFRQLEVRVPIIVAGYE 126
Query: 121 LDLREDRGYFADHMGSNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180
+D +E +F+ ITSA ++ R+ I+ S++ K V A K V+
Sbjct: 127 VDNKEAYNHFSIEQ----ITSALMKQYRE---VETSIQWSAQRLDQAKDVLYYAQKAVID 179
Query: 181 P 181
P
Sbjct: 180 P 180