Miyakogusa Predicted Gene
- Lj2g3v0766630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0766630.1 tr|G7KNG0|G7KNG0_MEDTR Serine incorporator
OS=Medicago truncatula GN=MTR_6g086060 PE=4
SV=1,82.76,0,UNCHARACTERIZED,NULL; SERINE INCORPORATOR,TMS membrane
protein/tumour differentially expressed prote,CUFF.35379.1
(385 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24460.1 | Symbols: | Serinc-domain containing serine and sp... 519 e-147
AT4G13345.1 | Symbols: MEE55 | Serinc-domain containing serine a... 499 e-141
AT4G13345.2 | Symbols: MEE55 | Serinc-domain containing serine a... 496 e-140
AT2G33205.1 | Symbols: | Serinc-domain containing serine and sp... 313 2e-85
AT3G06170.1 | Symbols: | Serinc-domain containing serine and sp... 169 2e-42
AT1G16180.2 | Symbols: | Serinc-domain containing serine and sp... 150 2e-36
AT1G16180.1 | Symbols: | Serinc-domain containing serine and sp... 150 2e-36
>AT3G24460.1 | Symbols: | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr3:8886160-8889717
REVERSE LENGTH=409
Length = 409
Score = 519 bits (1337), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/384 (64%), Positives = 297/384 (77%), Gaps = 5/384 (1%)
Query: 5 EDNSSNQQGCGVLLKVSSWLSQFRNASNPKMARYVYALIFLVCNLLAWASRDELPGRSVL 64
+N S + +K SW +QFRN NP MARYVY LIFL+ NLLAWA+RD GR L
Sbjct: 9 NNNQSIRNDSYEAIKNGSWFNQFRNGCNPWMARYVYGLIFLIANLLAWAARDY--GRGAL 66
Query: 65 TKLKGLKTCKDPKDCLGTNGVLRVSMGCFLFFMMMFWSTARASKLNETRDTWHSGWWSIK 124
K+ K CK ++CLGT+GVLRVS+GCFLF+ +MF ST SK + +RD WHSGWW +K
Sbjct: 67 RKVTRFKNCKGGENCLGTDGVLRVSLGCFLFYFVMFLSTLGTSKTHSSRDRWHSGWWFVK 126
Query: 125 IVLWVAVTIFPFLLPSELIDLYGEVAHFGAGVXXXXXXXXXXXXXTWLNDFFASEKYAER 184
+++W A+TI PFLLPS +I LYGE+AHFGAGV WLN+ + S+K AER
Sbjct: 127 LIMWPALTIIPFLLPSSIIHLYGEIAHFGAGVFLLIQLISVISFIQWLNECYQSQKDAER 186
Query: 185 CQIHVMLFATASYFICMVGVILMYIWYAPQPSCLLNISFITFTLVLLQIMTSVSLHPKVN 244
C+++VML +T SY +C+VGVILMYIWYAP SCLLNI FIT+TL L+Q+MTS++LHPKVN
Sbjct: 187 CRVYVMLLSTTSYTVCIVGVILMYIWYAPDSSCLLNIFFITWTLFLIQLMTSIALHPKVN 246
Query: 245 AGILSPGLMGLYVVFLCWCAIRSEPEGYECIRKSDSPNKTDWQNIISLVVGILALVIATF 304
AG L+P LMGLYVVF+CWCAIRSEP G C RK+ + N+TDW IIS VV +LA+VIATF
Sbjct: 247 AGYLTPALMGLYVVFICWCAIRSEPVGESCNRKAAASNRTDWLTIISFVVALLAMVIATF 306
Query: 305 STGIDSKCFQYRKGDKPAE---EDDVPYGYGFFHFVFATGAMYFAMLLVGWNSHHSMKKW 361
STGIDS+CFQ++K + E EDDVPYGYGFFHFVFATGAMYFAMLL+GWN+HH MKKW
Sbjct: 307 STGIDSQCFQFKKDENDQEEEAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHPMKKW 366
Query: 362 TIDVGWTSAWVRIVNEWLAVCVYL 385
TIDVGWTS WVR+VNEWLAVCVY+
Sbjct: 367 TIDVGWTSTWVRVVNEWLAVCVYI 390
>AT4G13345.1 | Symbols: MEE55 | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr4:7767292-7769426
FORWARD LENGTH=394
Length = 394
Score = 499 bits (1285), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/368 (66%), Positives = 288/368 (78%), Gaps = 3/368 (0%)
Query: 18 LKVSSWLSQFRNASNPKMARYVYALIFLVCNLLAWASRDELPGRSVLTKLKGLKTCKDPK 77
+K SW QFRN NP MARYVY LIFL+ NLLAWA RD GR LT+++ K CK+
Sbjct: 15 IKNGSWFIQFRNGCNPWMARYVYGLIFLLANLLAWALRDY--GRGALTEMRKFKNCKEGG 72
Query: 78 DCLGTNGVLRVSMGCFLFFMMMFWSTARASKLNETRDTWHSGWWSIKIVLWVAVTIFPFL 137
DCLGT GVLRVS GCFLF+ +MF ST SK + +RD WHSGWW K+ + + +TIFPFL
Sbjct: 73 DCLGTEGVLRVSFGCFLFYFIMFLSTVGTSKTHSSRDKWHSGWWFAKLFMLLGLTIFPFL 132
Query: 138 LPSELIDLYGEVAHFGAGVXXXXXXXXXXXXXTWLNDFFASEKYAERCQIHVMLFATASY 197
LPS +I YGE+AHFGAGV TWLN+ F ++K AERC +HVML AT +Y
Sbjct: 133 LPSSIIQFYGEIAHFGAGVFLLIQLISIISFITWLNECFQAQKDAERCHVHVMLLATTAY 192
Query: 198 FICMVGVILMYIWYAPQPSCLLNISFITFTLVLLQIMTSVSLHPKVNAGILSPGLMGLYV 257
+C++GVILMYIWY P+PSCLLNI FIT+TL L+Q+MTS+SLHPK+NAG L+P LMGLYV
Sbjct: 193 TVCILGVILMYIWYVPEPSCLLNIFFITWTLFLIQLMTSISLHPKINAGFLTPALMGLYV 252
Query: 258 VFLCWCAIRSEPEGYECIRKSDSPNKTDWQNIISLVVGILALVIATFSTGIDSKCFQYRK 317
VF+CWCAIRSEP G C RK++ ++TDW IIS VV +LA+VIATFSTG+DS+CFQ+RK
Sbjct: 253 VFICWCAIRSEPVGETCNRKAEGSSRTDWLTIISFVVALLAMVIATFSTGVDSQCFQFRK 312
Query: 318 GDKPAEEDDVPYGYGFFHFVFATGAMYFAMLLVGWNSHHSMKKWTIDVGWTSAWVRIVNE 377
D+ EED +PYGYGFFHFVFATGAMYFAMLLVGWN HHSMKKWTIDVGWTS WVRIVNE
Sbjct: 313 -DENHEEDAIPYGYGFFHFVFATGAMYFAMLLVGWNIHHSMKKWTIDVGWTSTWVRIVNE 371
Query: 378 WLAVCVYL 385
WLAV VY+
Sbjct: 372 WLAVGVYI 379
>AT4G13345.2 | Symbols: MEE55 | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr4:7767292-7769426
FORWARD LENGTH=394
Length = 394
Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/368 (65%), Positives = 287/368 (77%), Gaps = 3/368 (0%)
Query: 18 LKVSSWLSQFRNASNPKMARYVYALIFLVCNLLAWASRDELPGRSVLTKLKGLKTCKDPK 77
+K SW QFRN NP MARYVY LIFL+ NLLAWA RD GR LT+++ K CK+
Sbjct: 15 IKNGSWFIQFRNGCNPWMARYVYGLIFLLANLLAWALRDY--GRGALTEMRKFKNCKEGG 72
Query: 78 DCLGTNGVLRVSMGCFLFFMMMFWSTARASKLNETRDTWHSGWWSIKIVLWVAVTIFPFL 137
DCLGT GVLRVS GCFLF+ +MF ST SK + +RD WHSGWW K+ + + +TIFPFL
Sbjct: 73 DCLGTEGVLRVSFGCFLFYFIMFLSTVGTSKTHSSRDKWHSGWWFAKLFMLLGLTIFPFL 132
Query: 138 LPSELIDLYGEVAHFGAGVXXXXXXXXXXXXXTWLNDFFASEKYAERCQIHVMLFATASY 197
LPS +I YGE+AHFGAGV TWLN+ F ++K AERC +HVML AT +Y
Sbjct: 133 LPSSIIQFYGEIAHFGAGVFLLIQLISIISFITWLNECFQAQKDAERCHVHVMLLATTAY 192
Query: 198 FICMVGVILMYIWYAPQPSCLLNISFITFTLVLLQIMTSVSLHPKVNAGILSPGLMGLYV 257
+C++GVILMYIWY P+PSCLLNI FIT+TL L+Q+MTS+SLHPK+NAG L+P LMGLYV
Sbjct: 193 TVCILGVILMYIWYVPEPSCLLNIFFITWTLFLIQLMTSISLHPKINAGFLTPALMGLYV 252
Query: 258 VFLCWCAIRSEPEGYECIRKSDSPNKTDWQNIISLVVGILALVIATFSTGIDSKCFQYRK 317
VF+CWCAIR +P G C RK++ ++TDW IIS VV +LA+VIATFSTG+DS+CFQ+RK
Sbjct: 253 VFICWCAIRRQPVGETCNRKAEGSSRTDWLTIISFVVALLAMVIATFSTGVDSQCFQFRK 312
Query: 318 GDKPAEEDDVPYGYGFFHFVFATGAMYFAMLLVGWNSHHSMKKWTIDVGWTSAWVRIVNE 377
D+ EED +PYGYGFFHFVFATGAMYFAMLLVGWN HHSMKKWTIDVGWTS WVRIVNE
Sbjct: 313 -DENHEEDAIPYGYGFFHFVFATGAMYFAMLLVGWNIHHSMKKWTIDVGWTSTWVRIVNE 371
Query: 378 WLAVCVYL 385
WLAV VY+
Sbjct: 372 WLAVGVYI 379
>AT2G33205.1 | Symbols: | Serinc-domain containing serine and
sphingolipid biosynthesis protein |
chr2:14070987-14073211 REVERSE LENGTH=422
Length = 422
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/364 (44%), Positives = 226/364 (62%), Gaps = 6/364 (1%)
Query: 24 LSQFRNASNPKMARYVYALIFLVCNLLAWASRDELPGRSVLTKLKGLKTC-KDPKDCLGT 82
L ++ + ARY Y IFL+ NL AW RD + L L + +C + C T
Sbjct: 37 LYYYQEKNKSLRARYTYGTIFLIINLCAWFIRDY--AQKALALLPYVSSCGPEGSRCFHT 94
Query: 83 NGVLRVSMGCFLFFMMMFWSTARASKLNETRDTWHSGWWSIKIVLWVAVTIFPFLLPSEL 142
GVLRVS+GCF+F+ +MF ST KL+E +++WHS W K L V V + F +P
Sbjct: 95 LGVLRVSLGCFIFYFVMFLSTWNTMKLHEAQNSWHSDNWIFKFFLLVIVMVASFFIPQLY 154
Query: 143 IDLYGEVAHFGAGVXXXXXXXXXXXXXTWLNDFFASEKYAERCQIHVMLFATASYFICMV 202
I +YGE+A GAG+ TW N+++ + +++ ++ + Y +
Sbjct: 155 IQIYGEIARVGAGIFLGLQLVSVIEFITWWNNYWMPQNQSKQSCSFGLVMSIVFYIGSVC 214
Query: 203 GVILMYIWYAPQPSCLLNISFITFTLVLLQIMTSVSLHPKV-NAGILSPGLMGLYVVFLC 261
G+ +MY +Y +C LNI FI++T++LL +M +SLH KV N G+LS G+M Y+VFLC
Sbjct: 215 GIAVMYYFYGASTACGLNIFFISWTVILLIVMMVISLHSKVKNRGLLSSGIMASYIVFLC 274
Query: 262 WCAIRSEPEGYECIRKSDSPNKTDWQNIISLVVGILALVIATFSTGIDSKCFQYRKGDKP 321
W AIRSEP +C + + + TDW I+S ++ I A+V+ATFSTGIDS+ F++RK D+
Sbjct: 275 WSAIRSEPSHTKCNAHTQNSH-TDWTTILSFLIAIGAIVMATFSTGIDSESFRFRK-DEA 332
Query: 322 AEEDDVPYGYGFFHFVFATGAMYFAMLLVGWNSHHSMKKWTIDVGWTSAWVRIVNEWLAV 381
EEDD+PY YGFFH VF+ GAMYFAML + WN HS +KW+IDVGWTS WV+IVNEW A
Sbjct: 333 KEEDDIPYSYGFFHLVFSLGAMYFAMLFISWNLSHSTEKWSIDVGWTSTWVKIVNEWFAA 392
Query: 382 CVYL 385
+YL
Sbjct: 393 AIYL 396
>AT3G06170.1 | Symbols: | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr3:1867520-1869738
FORWARD LENGTH=409
Length = 409
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 185/396 (46%), Gaps = 39/396 (9%)
Query: 14 CGVLLKVSSWLSQFRNASNPKMARYVYALIFLVCNLLAWASRDELPGRSVLTKLKGLKTC 73
CG+ V+S +S+ K AR Y +F +++W R+ G +L KL + T
Sbjct: 14 CGLCSSVASGISR-------KSARIAYCGLFGASLVVSWILRET--GAPLLEKLPWINTS 64
Query: 74 KD-PKDCLGTNGVLRVSMGCFLFFMMMFWSTARASKLNETRDTWHSGWWSIKIVLWVAVT 132
K+ VLRVS G FLFF + N+ RD+WH G W +K+++W +
Sbjct: 65 DSYTKEWYQQQAVLRVSFGNFLFFAIYALIMIGVKDQNDRRDSWHHGGWGLKMIVWFLLV 124
Query: 133 IFPFLLPSELIDLYGEVAHFGAGVXXXXXXXXXXXXXTWLNDFFASEKYAERCQIHVMLF 192
+ F +P+ ++ LYG ++ FGAG ND + EK ++ I +++
Sbjct: 125 VLMFFVPNVIVSLYGTLSKFGAGAFLLVQVVLLLDATHNWNDSWV-EKDEKKWYIALLVI 183
Query: 193 ATASYFICMVGVILMYIWYAPQ-PSCLLNISFITFTLVLLQIMTSVSLHPKVNAGILSPG 251
+ Y +++IW+ P C LN+ FI ++L + ++LHP VN +L
Sbjct: 184 SIVCYIATYTFSGILFIWFNPSGQDCGLNVFFIVMPMILAFVFAIIALHPAVNGSLLPAS 243
Query: 252 LMGLYVVFLCWCAIRSEPEGYECIRKSDSPNKTDWQNIISLVVGILALVIATF------- 304
++ +Y ++C+ + SEP Y C + NK+ N +L++G+L V++
Sbjct: 244 VISVYCAYVCYTGLSSEPHDYVC----NGLNKSKAVNASTLILGMLTTVLSVLYSALRAG 299
Query: 305 -STGIDSKCFQYRKGDK--------------PAEEDDVPYGYGFFHFVFATGAMYFAMLL 349
ST S R G K AE V Y Y FFH +FA +MY AMLL
Sbjct: 300 SSTTFLSPPSSPRSGVKDALLGDPEDGKKSGEAEARPVSYSYSFFHIIFALASMYAAMLL 359
Query: 350 VGWNSHHSMKKWTIDVGWTSAWVRIVNEWLAVCVYL 385
GW + S IDVGWTS WV+I W+ +Y+
Sbjct: 360 SGW-TDSSESATLIDVGWTSVWVKICTGWVTAGLYI 394
>AT1G16180.2 | Symbols: | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr1:5540905-5542670
FORWARD LENGTH=412
Length = 412
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 165/373 (44%), Gaps = 24/373 (6%)
Query: 34 KMARYVYALIFLVCNLLAWASRD-ELPGRSVLTKLKGLKTCKDPKDCLGTNGVLRVSMGC 92
+ AR Y +F + +++W R+ P L + D ++ T+ VLRVS+G
Sbjct: 29 RSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPD-REWFETDAVLRVSLGN 87
Query: 93 FLFFMMMFWSTARASKLNETRDTWHSGWWSIKIVLWVAVTIFPFLLPSELIDLYGEVAHF 152
FLFF ++ + RD H G W +KI+ W + IF F LP+E+I Y ++ F
Sbjct: 88 FLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLPNEIISFYESMSKF 147
Query: 153 GAGVXXXXXXXXXXXXXTWLNDFFASEKYAERCQIHVMLFAT-ASYFICMVGVILMYIWY 211
GAG ND + Y E+ +L + Y V ++ W+
Sbjct: 148 GAGFFLLVQVVLLLDFVHGWNDTWVG--YDEQFWYAALLVVSLVCYLATFVFSGFLFHWF 205
Query: 212 APQ-PSCLLNISFITFTLVLLQIMTSVSLHPKVNAGILSPGLMGLYVVFLCWCAIRSEPE 270
P C LN FI TL+ + + V LHP V IL ++ LY ++LC+ + SEP
Sbjct: 206 TPSGHDCGLNTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVISLYCMYLCYSGLASEPR 265
Query: 271 GYECIR-KSDSPNKTDWQNIISLVVGILALVIATFSTGIDSKCF---QYRKGDKPAEEDD 326
YEC + S + I L+ +L++V + G + + +KP D
Sbjct: 266 DYECNGLHNHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSPRAEKPLLPID 325
Query: 327 --------------VPYGYGFFHFVFATGAMYFAMLLVGWNSHHSMKKWTIDVGWTSAWV 372
V Y Y FFH +F+ +MY AMLL GW++ +DVGW S WV
Sbjct: 326 GKAEEKEEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWV 385
Query: 373 RIVNEWLAVCVYL 385
R+V W +++
Sbjct: 386 RVVTSWATAGLFI 398
>AT1G16180.1 | Symbols: | Serinc-domain containing serine and
sphingolipid biosynthesis protein | chr1:5540905-5542670
FORWARD LENGTH=412
Length = 412
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 165/373 (44%), Gaps = 24/373 (6%)
Query: 34 KMARYVYALIFLVCNLLAWASRD-ELPGRSVLTKLKGLKTCKDPKDCLGTNGVLRVSMGC 92
+ AR Y +F + +++W R+ P L + D ++ T+ VLRVS+G
Sbjct: 29 RSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPD-REWFETDAVLRVSLGN 87
Query: 93 FLFFMMMFWSTARASKLNETRDTWHSGWWSIKIVLWVAVTIFPFLLPSELIDLYGEVAHF 152
FLFF ++ + RD H G W +KI+ W + IF F LP+E+I Y ++ F
Sbjct: 88 FLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLPNEIISFYESMSKF 147
Query: 153 GAGVXXXXXXXXXXXXXTWLNDFFASEKYAERCQIHVMLFAT-ASYFICMVGVILMYIWY 211
GAG ND + Y E+ +L + Y V ++ W+
Sbjct: 148 GAGFFLLVQVVLLLDFVHGWNDTWVG--YDEQFWYAALLVVSLVCYLATFVFSGFLFHWF 205
Query: 212 APQ-PSCLLNISFITFTLVLLQIMTSVSLHPKVNAGILSPGLMGLYVVFLCWCAIRSEPE 270
P C LN FI TL+ + + V LHP V IL ++ LY ++LC+ + SEP
Sbjct: 206 TPSGHDCGLNTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVISLYCMYLCYSGLASEPR 265
Query: 271 GYECIR-KSDSPNKTDWQNIISLVVGILALVIATFSTGIDSKCF---QYRKGDKPAEEDD 326
YEC + S + I L+ +L++V + G + + +KP D
Sbjct: 266 DYECNGLHNHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSPRAEKPLLPID 325
Query: 327 --------------VPYGYGFFHFVFATGAMYFAMLLVGWNSHHSMKKWTIDVGWTSAWV 372
V Y Y FFH +F+ +MY AMLL GW++ +DVGW S WV
Sbjct: 326 GKAEEKEEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWV 385
Query: 373 RIVNEWLAVCVYL 385
R+V W +++
Sbjct: 386 RVVTSWATAGLFI 398