Miyakogusa Predicted Gene
- Lj2g3v0766610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0766610.1 tr|Q6PH01|Q6PH01_DANRE ArfGAP with FG repeats 1
OS=Danio rerio GN=agfg1a PE=2 SV=1,38.52,3e-19,REVINTRACTNG,Arf GTPase
activating protein; Putative GTP-ase activating proteins for the,Arf
GTPase ,CUFF.35401.1
(162 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G13350.2 | Symbols: NIG | NSP (nuclear shuttle protein)-inter... 224 1e-59
AT4G13350.1 | Symbols: NIG | NSP (nuclear shuttle protein)-inter... 224 1e-59
AT1G08680.4 | Symbols: ZIGA4 | ARF GAP-like zinc finger-containi... 218 1e-57
AT1G08680.1 | Symbols: ZIGA4, AGD14 | ARF GAP-like zinc finger-c... 218 1e-57
AT1G08680.3 | Symbols: ZIGA4 | ARF GAP-like zinc finger-containi... 218 1e-57
AT1G08680.2 | Symbols: ZIGA4 | ARF GAP-like zinc finger-containi... 218 1e-57
AT4G32630.2 | Symbols: | ArfGap/RecO-like zinc finger domain-co... 207 2e-54
AT4G32630.1 | Symbols: | ArfGap/RecO-like zinc finger domain-co... 207 2e-54
AT5G54310.1 | Symbols: NEV, AGD5 | ARF-GAP domain 5 | chr5:22057... 73 8e-14
AT3G17660.1 | Symbols: AGD15 | ARF-GAP domain 15 | chr3:6037717-... 66 1e-11
AT4G05330.1 | Symbols: AGD13 | ARF-GAP domain 13 | chr4:2720772-... 63 1e-10
AT4G21160.4 | Symbols: ZAC | Calcium-dependent ARF-type GTPase a... 60 6e-10
AT4G21160.2 | Symbols: ZAC | Calcium-dependent ARF-type GTPase a... 60 6e-10
AT4G21160.3 | Symbols: ZAC | Calcium-dependent ARF-type GTPase a... 60 6e-10
AT4G21160.1 | Symbols: ZAC, AGD12 | Calcium-dependent ARF-type G... 60 6e-10
AT3G53710.2 | Symbols: AGD6 | ARF-GAP domain 6 | chr3:19903730-1... 57 6e-09
AT3G53710.1 | Symbols: AGD6 | ARF-GAP domain 6 | chr3:19903730-1... 57 6e-09
AT3G07940.1 | Symbols: | Calcium-dependent ARF-type GTPase acti... 57 8e-09
AT2G35210.1 | Symbols: RPA, AGD10, MEE28 | root and pollen arfga... 56 9e-09
AT2G35210.2 | Symbols: RPA, AGD10, MEE28 | root and pollen arfga... 56 1e-08
AT2G37550.2 | Symbols: ASP1, AGD7 | ARF-GAP domain 7 | chr2:1575... 54 7e-08
AT2G37550.1 | Symbols: ASP1, AGD7 | ARF-GAP domain 7 | chr2:1575... 54 7e-08
AT5G46750.1 | Symbols: AGD9 | ARF-GAP domain 9 | chr5:18969950-1... 51 4e-07
AT4G17890.2 | Symbols: AGD8 | ARF-GAP domain 8 | chr4:9937121-99... 51 4e-07
AT4G17890.1 | Symbols: AGD8 | ARF-GAP domain 8 | chr4:9937121-99... 50 6e-07
>AT4G13350.2 | Symbols: NIG | NSP (nuclear shuttle
protein)-interacting GTPase | chr4:7770170-7773321
REVERSE LENGTH=602
Length = 602
Score = 224 bits (572), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/162 (68%), Positives = 121/162 (74%), Gaps = 15/162 (9%)
Query: 1 MASR-KEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHR 59
MA R KEDEKNE++IR LLKL N+RCINCNSLGPQYVCT FWTFVCTNCSGIHREFTHR
Sbjct: 1 MAGRVKEDEKNEKIIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREFTHR 60
Query: 60 VKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR 119
VKSISMAKFTSQEV AL+EGGNQ AK+IYFK D Q QS PD +NV RLRDFI+HVYV++
Sbjct: 61 VKSISMAKFTSQEVTALKEGGNQHAKDIYFKGLDQQRQSVPDGSNVERLRDFIRHVYVNK 120
Query: 120 RYTGDKTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPPYED 161
RYT +K DK P SRSPPYED
Sbjct: 121 RYTNEKNDDKSPSETRSSSG--------------SRSPPYED 148
>AT4G13350.1 | Symbols: NIG | NSP (nuclear shuttle
protein)-interacting GTPase | chr4:7770170-7773321
REVERSE LENGTH=602
Length = 602
Score = 224 bits (572), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/162 (68%), Positives = 121/162 (74%), Gaps = 15/162 (9%)
Query: 1 MASR-KEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHR 59
MA R KEDEKNE++IR LLKL N+RCINCNSLGPQYVCT FWTFVCTNCSGIHREFTHR
Sbjct: 1 MAGRVKEDEKNEKIIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREFTHR 60
Query: 60 VKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR 119
VKSISMAKFTSQEV AL+EGGNQ AK+IYFK D Q QS PD +NV RLRDFI+HVYV++
Sbjct: 61 VKSISMAKFTSQEVTALKEGGNQHAKDIYFKGLDQQRQSVPDGSNVERLRDFIRHVYVNK 120
Query: 120 RYTGDKTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPPYED 161
RYT +K DK P SRSPPYED
Sbjct: 121 RYTNEKNDDKSPSETRSSSG--------------SRSPPYED 148
>AT1G08680.4 | Symbols: ZIGA4 | ARF GAP-like zinc finger-containing
protein ZIGA4 | chr1:2762820-2768387 FORWARD LENGTH=651
Length = 651
Score = 218 bits (556), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 121/160 (75%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRV 60
M S++E+E+NE++IRGL+KL NRRCINCNSLGPQYVCT FWTFVC CSGIHREFTHRV
Sbjct: 2 MGSKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHRV 61
Query: 61 KSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDRR 120
KS+SM+KFTS+EV LQ GGNQRA+EIY K WD Q Q P+++N R+R+FIK+VYV ++
Sbjct: 62 KSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKK 121
Query: 121 YTGDKTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPPYE 160
Y G +DKP K RRA +Y S+SPPY+
Sbjct: 122 YAGANDADKPSKDSQDHVSSEDMTRRANSYHSYSQSPPYD 161
>AT1G08680.1 | Symbols: ZIGA4, AGD14 | ARF GAP-like zinc
finger-containing protein ZIGA4 | chr1:2762820-2768387
FORWARD LENGTH=649
Length = 649
Score = 218 bits (556), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 121/160 (75%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRV 60
M S++E+E+NE++IRGL+KL NRRCINCNSLGPQYVCT FWTFVC CSGIHREFTHRV
Sbjct: 2 MGSKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHRV 61
Query: 61 KSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDRR 120
KS+SM+KFTS+EV LQ GGNQRA+EIY K WD Q Q P+++N R+R+FIK+VYV ++
Sbjct: 62 KSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKK 121
Query: 121 YTGDKTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPPYE 160
Y G +DKP K RRA +Y S+SPPY+
Sbjct: 122 YAGANDADKPSKDSQDHVSSEDMTRRANSYHSYSQSPPYD 161
>AT1G08680.3 | Symbols: ZIGA4 | ARF GAP-like zinc finger-containing
protein ZIGA4 | chr1:2762820-2768387 FORWARD LENGTH=607
Length = 607
Score = 218 bits (556), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 121/160 (75%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRV 60
M S++E+E+NE++IRGL+KL NRRCINCNSLGPQYVCT FWTFVC CSGIHREFTHRV
Sbjct: 2 MGSKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHRV 61
Query: 61 KSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDRR 120
KS+SM+KFTS+EV LQ GGNQRA+EIY K WD Q Q P+++N R+R+FIK+VYV ++
Sbjct: 62 KSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKK 121
Query: 121 YTGDKTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPPYE 160
Y G +DKP K RRA +Y S+SPPY+
Sbjct: 122 YAGANDADKPSKDSQDHVSSEDMTRRANSYHSYSQSPPYD 161
>AT1G08680.2 | Symbols: ZIGA4 | ARF GAP-like zinc finger-containing
protein ZIGA4 | chr1:2762820-2768387 FORWARD LENGTH=648
Length = 648
Score = 218 bits (556), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 121/160 (75%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRV 60
M S++E+E+NE++IRGL+KL NRRCINCNSLGPQYVCT FWTFVC CSGIHREFTHRV
Sbjct: 2 MGSKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHRV 61
Query: 61 KSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDRR 120
KS+SM+KFTS+EV LQ GGNQRA+EIY K WD Q Q P+++N R+R+FIK+VYV ++
Sbjct: 62 KSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKK 121
Query: 121 YTGDKTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPPYE 160
Y G +DKP K RRA +Y S+SPPY+
Sbjct: 122 YAGANDADKPSKDSQDHVSSEDMTRRANSYHSYSQSPPYD 161
>AT4G32630.2 | Symbols: | ArfGap/RecO-like zinc finger
domain-containing protein | chr4:15738315-15741412
FORWARD LENGTH=628
Length = 628
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 119/152 (78%), Gaps = 3/152 (1%)
Query: 5 KEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSIS 64
KEDE+ E+ IR LLKL NRRCINCNSLGPQYVC+ FWTFVC NCSGIHREFTHRVKS+S
Sbjct: 2 KEDERTEKAIRSLLKLPENRRCINCNSLGPQYVCSTFWTFVCVNCSGIHREFTHRVKSVS 61
Query: 65 MAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDRRYTGD 124
MAKFT+ EV AL+ GGN+RA++IYFKEWDA PD +N+ +LRDFI+ VYVD+RY+
Sbjct: 62 MAKFTADEVSALRAGGNERARQIYFKEWDAHRDGYPDRSNIFKLRDFIRSVYVDKRYS-- 119
Query: 125 KTSDKPPKVKAGDKDDSYENRRAEAYQGGSRS 156
+SDK + K+ +D E+++ A+ GSRS
Sbjct: 120 -SSDKISQQKSDVTEDYRESKKTSAHVLGSRS 150
>AT4G32630.1 | Symbols: | ArfGap/RecO-like zinc finger
domain-containing protein | chr4:15738315-15741412
FORWARD LENGTH=627
Length = 627
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 119/152 (78%), Gaps = 3/152 (1%)
Query: 5 KEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSIS 64
KEDE+ E+ IR LLKL NRRCINCNSLGPQYVC+ FWTFVC NCSGIHREFTHRVKS+S
Sbjct: 2 KEDERTEKAIRSLLKLPENRRCINCNSLGPQYVCSTFWTFVCVNCSGIHREFTHRVKSVS 61
Query: 65 MAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDRRYTGD 124
MAKFT+ EV AL+ GGN+RA++IYFKEWDA PD +N+ +LRDFI+ VYVD+RY+
Sbjct: 62 MAKFTADEVSALRAGGNERARQIYFKEWDAHRDGYPDRSNIFKLRDFIRSVYVDKRYS-- 119
Query: 125 KTSDKPPKVKAGDKDDSYENRRAEAYQGGSRS 156
+SDK + K+ +D E+++ A+ GSRS
Sbjct: 120 -SSDKISQQKSDVTEDYRESKKTSAHVLGSRS 150
>AT5G54310.1 | Symbols: NEV, AGD5 | ARF-GAP domain 5 |
chr5:22057262-22061066 REVERSE LENGTH=483
Length = 483
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 15/161 (9%)
Query: 3 SRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THR 59
S++ + ++ +++ GLLK NR C +C + GP++ N F+C CSGIHR +
Sbjct: 8 SKELNARHRKILEGLLKHPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHISK 67
Query: 60 VKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR 119
V+S ++ + ++V +Q GN +A W+A+ P+ + V + +FI+ Y ++
Sbjct: 68 VRSATLDTWLPEQVAFIQSMGNDKANSY----WEAEL--PPNYDRVG-IENFIRAKYEEK 120
Query: 120 RYT--GDKTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPP 158
R+ G+K + PP+V+ ++ S E R Y+ G S P
Sbjct: 121 RWVSRGEK-ARSPPRVEQ-ERRKSVE-RSGPGYEHGHSSSP 158
>AT3G17660.1 | Symbols: AGD15 | ARF-GAP domain 15 |
chr3:6037717-6039092 FORWARD LENGTH=232
Length = 232
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 2 ASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---TH 58
S++ + K+ +++ LLK NR C +C S P++ N F+C CSGIHR
Sbjct: 7 VSKELNAKHSKILEALLKHPDNRECADCRSKAPRWASVNLGIFICMQCSGIHRSLGVHIS 66
Query: 59 RVKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQH--QSSPDSNNVNRLRDFIKHVY 116
+V+SI++ + +V ++ GN + E Y++ QH +SS D+ FI+ Y
Sbjct: 67 QVRSITLDTWLPDQVAFMKSTGNAKGNE-YWESELPQHFERSSSDT--------FIRAKY 117
Query: 117 VDRRYTGDKTSDKPPKV 133
++R+ P V
Sbjct: 118 SEKRWVSPGAIQPAPIV 134
>AT4G05330.1 | Symbols: AGD13 | ARF-GAP domain 13 |
chr4:2720772-2722679 REVERSE LENGTH=336
Length = 336
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 11 ERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF-TH--RVKSISMAK 67
+R IR LL NR C +C + P++ N F+C C G+HR TH +V S+++ +
Sbjct: 15 KRRIRDLLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDE 74
Query: 68 FTSQEVIALQE-GGNQRAKEIYFKEW-DAQHQSSPDSNNVNRLRDFIKHVY 116
++ +EV ++ E GGN A IY D + PD N+ R+R FI+ Y
Sbjct: 75 WSDEEVDSMIEIGGNASANSIYEAFLPDTCSKPGPDVNHDQRMR-FIRAKY 124
>AT4G21160.4 | Symbols: ZAC | Calcium-dependent ARF-type GTPase
activating protein family | chr4:11284694-11286532
FORWARD LENGTH=337
Length = 337
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 10 NERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMA 66
+R IR LL NR C +C + P++ N F+C C G+HR +V S+++
Sbjct: 14 GKRRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLD 73
Query: 67 KFTSQEVIALQE-GGNQRAKEIY--FKEWDAQHQSSPDSNNVNRLRDFIKHVY 116
+++ +EV ++ E GGN A IY F + + PD+++ R+R FI+ Y
Sbjct: 74 EWSDEEVDSMIEIGGNASANSIYEAFIP-EGSSKPGPDASHDQRMR-FIRSKY 124
>AT4G21160.2 | Symbols: ZAC | Calcium-dependent ARF-type GTPase
activating protein family | chr4:11284694-11286532
FORWARD LENGTH=337
Length = 337
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 10 NERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMA 66
+R IR LL NR C +C + P++ N F+C C G+HR +V S+++
Sbjct: 14 GKRRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLD 73
Query: 67 KFTSQEVIALQE-GGNQRAKEIY--FKEWDAQHQSSPDSNNVNRLRDFIKHVY 116
+++ +EV ++ E GGN A IY F + + PD+++ R+R FI+ Y
Sbjct: 74 EWSDEEVDSMIEIGGNASANSIYEAFIP-EGSSKPGPDASHDQRMR-FIRSKY 124
>AT4G21160.3 | Symbols: ZAC | Calcium-dependent ARF-type GTPase
activating protein family | chr4:11284694-11286532
FORWARD LENGTH=337
Length = 337
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 10 NERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMA 66
+R IR LL NR C +C + P++ N F+C C G+HR +V S+++
Sbjct: 14 GKRRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLD 73
Query: 67 KFTSQEVIALQE-GGNQRAKEIY--FKEWDAQHQSSPDSNNVNRLRDFIKHVY 116
+++ +EV ++ E GGN A IY F + + PD+++ R+R FI+ Y
Sbjct: 74 EWSDEEVDSMIEIGGNASANSIYEAFIP-EGSSKPGPDASHDQRMR-FIRSKY 124
>AT4G21160.1 | Symbols: ZAC, AGD12 | Calcium-dependent ARF-type
GTPase activating protein family |
chr4:11284694-11286532 FORWARD LENGTH=337
Length = 337
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 10 NERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMA 66
+R IR LL NR C +C + P++ N F+C C G+HR +V S+++
Sbjct: 14 GKRRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLD 73
Query: 67 KFTSQEVIALQE-GGNQRAKEIY--FKEWDAQHQSSPDSNNVNRLRDFIKHVY 116
+++ +EV ++ E GGN A IY F + + PD+++ R+R FI+ Y
Sbjct: 74 EWSDEEVDSMIEIGGNASANSIYEAFIP-EGSSKPGPDASHDQRMR-FIRSKY 124
>AT3G53710.2 | Symbols: AGD6 | ARF-GAP domain 6 |
chr3:19903730-19905419 REVERSE LENGTH=459
Length = 459
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 12 RVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAKF 68
R +R L N+ C++C PQ+ ++ F+C CSG HR V+S++M +
Sbjct: 5 RQLRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSW 64
Query: 69 TSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR--RYTGDKT 126
++ ++ ++ GGN+R + + AQ+ + +++ +++ VY DR +
Sbjct: 65 SAIQIKKMEAGGNERLNKFF-----AQYGIAKETDIISKYNSNAASVYRDRIQALAEGRP 119
Query: 127 SDKPPKVKAGDK 138
+ PP VK +K
Sbjct: 120 WNDPPVVKEANK 131
>AT3G53710.1 | Symbols: AGD6 | ARF-GAP domain 6 |
chr3:19903730-19905419 REVERSE LENGTH=459
Length = 459
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 12 RVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAKF 68
R +R L N+ C++C PQ+ ++ F+C CSG HR V+S++M +
Sbjct: 5 RQLRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSW 64
Query: 69 TSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR--RYTGDKT 126
++ ++ ++ GGN+R + + AQ+ + +++ +++ VY DR +
Sbjct: 65 SAIQIKKMEAGGNERLNKFF-----AQYGIAKETDIISKYNSNAASVYRDRIQALAEGRP 119
Query: 127 SDKPPKVKAGDK 138
+ PP VK +K
Sbjct: 120 WNDPPVVKEANK 131
>AT3G07940.1 | Symbols: | Calcium-dependent ARF-type GTPase
activating protein family | chr3:2529542-2531368 FORWARD
LENGTH=385
Length = 385
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 14 IRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAKFTS 70
+ LLK N+ C +C S P++V + F+C CSG+HR +V S+ + ++T
Sbjct: 50 LEKLLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTD 109
Query: 71 QEV-IALQEGGNQRAKEIYFK-EWDAQHQSSPDSNNVNRLRDFIKHVYVDRRYTGDK 125
+V + + GGN E + D + PDS N R DFI+ Y ++ K
Sbjct: 110 DQVDMLVGYGGNTAVNERFEACNIDQSKKPKPDSTNEER-NDFIRKKYEQHQFMDPK 165
>AT2G35210.1 | Symbols: RPA, AGD10, MEE28 | root and pollen arfgap |
chr2:14836206-14837946 FORWARD LENGTH=395
Length = 395
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---T 57
MAS ++K V + L N+ C +CN+ P + + F+C +CS +HR
Sbjct: 1 MASENLNDKIS-VFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHI 59
Query: 58 HRVKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYV 117
V+S ++ ++S+++ + GGN RA +++FK++ ++ +R D K +
Sbjct: 60 SFVRSTNLDSWSSEQLKMMIYGGNNRA-QVFFKQYGWSDGGKTEAKYTSRAADLYKQILA 118
Query: 118 DR--RYTGDKTSDKPP 131
+ ++ D PP
Sbjct: 119 KEVAKSKAEEELDLPP 134
>AT2G35210.2 | Symbols: RPA, AGD10, MEE28 | root and pollen arfgap |
chr2:14836206-14837884 FORWARD LENGTH=371
Length = 371
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---T 57
MAS ++K V + L N+ C +CN+ P + + F+C +CS +HR
Sbjct: 1 MASENLNDKIS-VFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHI 59
Query: 58 HRVKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYV 117
V+S ++ ++S+++ + GGN RA +++FK++ ++ +R D K +
Sbjct: 60 SFVRSTNLDSWSSEQLKMMIYGGNNRA-QVFFKQYGWSDGGKTEAKYTSRAADLYKQILA 118
Query: 118 DR--RYTGDKTSDKPP 131
+ ++ D PP
Sbjct: 119 KEVAKSKAEEELDLPP 134
>AT2G37550.2 | Symbols: ASP1, AGD7 | ARF-GAP domain 7 |
chr2:15755544-15757456 REVERSE LENGTH=456
Length = 456
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 12 RVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAKF 68
R +R L N+ C++C+ PQ+ ++ F+C CSG HR V+S++M +
Sbjct: 5 RRLRTLQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMDSW 64
Query: 69 TSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR 119
+ ++ + GGN+R AQ+ S +++ +++ VY DR
Sbjct: 65 SEIQIKKMDAGGNERLNNFL-----AQYGISKETDIISKYNSNAASVYRDR 110
>AT2G37550.1 | Symbols: ASP1, AGD7 | ARF-GAP domain 7 |
chr2:15755544-15757456 REVERSE LENGTH=456
Length = 456
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 12 RVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAKF 68
R +R L N+ C++C+ PQ+ ++ F+C CSG HR V+S++M +
Sbjct: 5 RRLRTLQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMDSW 64
Query: 69 TSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR 119
+ ++ + GGN+R AQ+ S +++ +++ VY DR
Sbjct: 65 SEIQIKKMDAGGNERLNNFL-----AQYGISKETDIISKYNSNAASVYRDR 110
>AT5G46750.1 | Symbols: AGD9 | ARF-GAP domain 9 |
chr5:18969950-18971817 REVERSE LENGTH=402
Length = 402
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---T 57
MA+ +KN V R L N+ C +C++ P + + F+C +CS +HR
Sbjct: 1 MATENLTDKN-VVFRKLKSKSENKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHI 59
Query: 58 HRVKSISMAKFTSQEVIALQEGGNQRAKEIYFKE 91
V+S ++ ++ +++ + GGN RA +++FK+
Sbjct: 60 SFVRSTNLDSWSPEQLRTMMFGGNNRA-QVFFKQ 92
>AT4G17890.2 | Symbols: AGD8 | ARF-GAP domain 8 |
chr4:9937121-9938988 FORWARD LENGTH=384
Length = 384
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 1 MASRKEDEKNER--VIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF-- 56
MAS D ++ V R L N+ C +C++ P + + F+C +CS HR
Sbjct: 1 MASSSADNLTDKNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGV 60
Query: 57 -THRVKSISMAKFTSQEVIALQEGGNQRAKEIYFKE 91
V+S ++ ++ +++ + GGN RA +++FK+
Sbjct: 61 HISFVRSTNLDSWSPEQLRTMMFGGNNRA-QVFFKQ 95
>AT4G17890.1 | Symbols: AGD8 | ARF-GAP domain 8 |
chr4:9937121-9939146 FORWARD LENGTH=413
Length = 413
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 1 MASRKEDEKNER--VIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF-- 56
MAS D ++ V R L N+ C +C++ P + + F+C +CS HR
Sbjct: 1 MASSSADNLTDKNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGV 60
Query: 57 -THRVKSISMAKFTSQEVIALQEGGNQRAKEIYFKE 91
V+S ++ ++ +++ + GGN RA +++FK+
Sbjct: 61 HISFVRSTNLDSWSPEQLRTMMFGGNNRA-QVFFKQ 95