Miyakogusa Predicted Gene

Lj2g3v0744270.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0744270.2 Non Chatacterized Hit- tr|I1KIU7|I1KIU7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21822
PE,90.59,0,coiled-coil,NULL; CASP,NULL; CCAAT DISPLACEMENT
PROTEIN-RELATED,NULL; CASP_C,CASP, C-terminal; seg,N,CUFF.35352.2
         (687 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18480.1 | Symbols: AtCASP, CASP | CCAAT-displacement protein...  1013   0.0  

>AT3G18480.1 | Symbols: AtCASP, CASP | CCAAT-displacement protein
           alternatively spliced product | chr3:6336924-6341596
           FORWARD LENGTH=689
          Length = 689

 Score = 1013 bits (2620), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/688 (74%), Positives = 571/688 (82%), Gaps = 12/688 (1%)

Query: 8   SGSGPDRDKPNAP---------IPVVSAFWKEFDLEKEKSILDEQGLRIAENQENSQKNR 58
           S  G +RDK   P         IPVV+ FWKEFDLEKEKS+LDEQGLRIAENQENSQKNR
Sbjct: 4   SQDGSERDKTPPPSSSSSSSSPIPVVTNFWKEFDLEKEKSLLDEQGLRIAENQENSQKNR 63

Query: 59  RKLAENTRGFKKASPEEKLGLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 118
           RKLAE+TR FKKASPE KL +FNSLLKGYQEEVDN+TKRAKFGENAFLNIYQKLYEAPDP
Sbjct: 64  RKLAESTRDFKKASPENKLSMFNSLLKGYQEEVDNITKRAKFGENAFLNIYQKLYEAPDP 123

Query: 119 YPALSSIAEQDLKLSEIESENRKMKVELEEFRTEATHLKNQQATIXXXXXXXXXXXXXXX 178
           +PAL+SIAEQD KLSE+ESENRKMKVELEEFRTEATHLKNQQATI               
Sbjct: 124 FPALASIAEQDRKLSEVESENRKMKVELEEFRTEATHLKNQQATIRRLEERNRQLEQQME 183

Query: 179 XXXXXXXXXXXRSLAEENQKTLEILKEREQVLQDQLQNAKESVSNMQKLHELAQNQLFEL 238
                      R+LAEENQKT+E+LK+REQ LQDQL+ AK+SVS MQKLHELAQNQLFEL
Sbjct: 184 EKIKEVVEIKQRNLAEENQKTMELLKDREQALQDQLRQAKDSVSTMQKLHELAQNQLFEL 243

Query: 239 RAQSDEDRAAKQSEVTLLMDEVERAQTMLLSLERQKGMLQSQLHTANEDTEIKKSDNLDT 298
           RAQSDE+ A KQSEV+LLMDEVERAQT LL+LER+KG L+SQL TANEDT+ KKSDN+D+
Sbjct: 244 RAQSDEETAGKQSEVSLLMDEVERAQTRLLTLEREKGHLRSQLQTANEDTDNKKSDNIDS 303

Query: 299 NSVLENSLNAKEKLISELNMELHNIETALSNEREEHINEVKKLTAMLNEKETALEEMKKE 358
           NS+LENSL AKEK+ISELNME+HN+ETAL+NERE H+ E+KKL ++LN+K+T +EEMKKE
Sbjct: 304 NSMLENSLTAKEKIISELNMEIHNVETALANERESHVAEIKKLNSLLNKKDTIIEEMKKE 363

Query: 359 LQTRPTEKMVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHEL 418
           LQ RP+ K+VDDLRKKVKILQAVGYNSIEAEDW+ AT+GEEMSKMESLLLDKNRKMEHE+
Sbjct: 364 LQERPSAKLVDDLRKKVKILQAVGYNSIEAEDWDAATTGEEMSKMESLLLDKNRKMEHEV 423

Query: 419 TQLKVTLSEKTSLLETAEQKITELAAKVNEQQKLIQKLEDDILKGYSSNSKDRKGTFLDD 478
           TQLKV LSEK SLLE AE K  EL AKVNEQQ+LIQKLEDDILKGY   SK+RKG   D+
Sbjct: 424 TQLKVQLSEKASLLEKAEAKGEELTAKVNEQQRLIQKLEDDILKGYG--SKERKGALFDE 481

Query: 479 WDLSEAGGGEASESTADQRQVALDQDQSSMLKVICNQXXXXXXXXXXXXXXXXQLKEKIG 538
           W+ SEAG  E SE   DQ+ V  +QDQSSMLKVIC+Q                +LKEKIG
Sbjct: 482 WEFSEAGVAEQSEPM-DQKHVPSEQDQSSMLKVICSQRDRFRARLRETEEEIRRLKEKIG 540

Query: 539 VLTVELEKTKADNVKLYGKIRYVQDYSLEKVVSRGSKKYAEDVESGFASDVESKYKKIYE 598
            LT ELEKTKADNVKLYGKIRYVQDY+ +KVVSRGSKKY ED+ESGF+SDVESKYKKIYE
Sbjct: 541 FLTDELEKTKADNVKLYGKIRYVQDYNHDKVVSRGSKKYVEDLESGFSSDVESKYKKIYE 600

Query: 599 DDINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCL 658
           DDINPFAAFSKKER+QR K+LG RDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCL
Sbjct: 601 DDINPFAAFSKKEREQRIKDLGIRDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCL 660

Query: 659 YRMSALSYLSNGPEEFLIGEKNVDLPRA 686
           YRMSA SYLS+G EE L+ E   +LP  
Sbjct: 661 YRMSAYSYLSHGAEETLMTEATTNLPHG 688