Miyakogusa Predicted Gene

Lj2g3v0741930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0741930.1 Non Chatacterized Hit- tr|I1KIV9|I1KIV9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16330
PE,32.27,0.000000000000001,seg,NULL,CUFF.35325.1
         (187 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G73885.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   110   7e-25

>AT1G73885.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast
           thylakoid membrane, chloroplast; Has 37 Blast hits to 37
           proteins in 13 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:27786864-27787708 FORWARD LENGTH=192
          Length = 192

 Score =  110 bits (274), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 72/91 (79%), Gaps = 1/91 (1%)

Query: 97  RALPGSEVDFFEGPQWDTVGLMGEYLWVAGVVFAILAGLFGAANYNQGASDFKDTPAYKE 156
           + LPG E D FEG +WD +G   +YLW  G++FA+++G   A  YN+GA+DFK+TP YKE
Sbjct: 89  KDLPGLEPDPFEGEKWDGLGFFVQYLWAFGILFALISGGLAAGTYNEGATDFKETPVYKE 148

Query: 157 SVQSRELLEQPDASDS-DVFESNPTEVAPSL 186
           ++QSR+LL++ ++S+S DVFESNPTEVAP++
Sbjct: 149 AIQSRDLLDEAESSNSEDVFESNPTEVAPTI 179