Miyakogusa Predicted Gene
- Lj2g3v0737520.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0737520.1 Non Chatacterized Hit- tr|I1N4C8|I1N4C8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25071
PE,41.59,0.0000000000007,STRUCTURAL CONSTITUENT OF RIBOSOME,NULL; 60S
RIBOSOMAL PROTEIN L34,Ribosomal protein L34Ae; seg,NULL,CUFF.35293.1
(595 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G73850.1 | Symbols: | Protein of unknown function (DUF1666) ... 371 e-103
AT3G20260.1 | Symbols: | Protein of unknown function (DUF1666) ... 148 9e-36
AT1G69610.1 | Symbols: | Protein of unknown function (DUF1666) ... 73 7e-13
AT5G39785.2 | Symbols: | Protein of unknown function (DUF1666) ... 64 4e-10
AT5G39785.1 | Symbols: | Protein of unknown function (DUF1666) ... 64 4e-10
>AT1G73850.1 | Symbols: | Protein of unknown function (DUF1666) |
chr1:27767375-27770386 FORWARD LENGTH=635
Length = 635
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/339 (57%), Positives = 236/339 (69%), Gaps = 20/339 (5%)
Query: 277 TDDPFSSSSRRSCPKWESYTVFQKYDEEMSFLDRISAQKLHETESLRSIKVAPRSISGRI 336
TDDPFS+SSRRSCPKWESYTVFQKYDEEM+FL RISAQKLHE ESL+SI V PRSIS RI
Sbjct: 297 TDDPFSTSSRRSCPKWESYTVFQKYDEEMTFLTRISAQKLHEAESLKSIMVEPRSISERI 356
Query: 337 VHKISTMNKK--------PDDTRHNPYHELEAAYVAQICITWEALNWNYKNFQSKRASRQ 388
VHK+S+ K + +R NPY ELE+AYVAQIC+TWEAL+WNYKNF+ KR++ Q
Sbjct: 357 VHKLSSNGHKKKQKQYPGSNGSRPNPYVELESAYVAQICLTWEALSWNYKNFERKRSTTQ 416
Query: 389 D--GDVGCPETIAXXXXXXXXXXXRYVENEPYEHGRRPEIYARMRHMAPKLLLVPEYRES 446
DVGCP IA RYVENEPYEHGRRPEIYARMR +APKLLLVPEY++
Sbjct: 417 RSFNDVGCPAGIADQFRTFHILLQRYVENEPYEHGRRPEIYARMRTLAPKLLLVPEYQDY 476
Query: 447 DDDHKENSL-------KISSGSFLVIMEDGIRTFMNFLKADKEKPCQ-VLAAYFRRNRRG 498
+++ ++ +ISS SFL+IME+ IRTFMNFL+ADKEKPCQ ++ A+F R++RG
Sbjct: 477 EEEEEKEDENEEGFRSRISSASFLMIMEECIRTFMNFLQADKEKPCQKIIKAFFGRSKRG 536
Query: 499 LIDPTLLRLXXXXXXXXXXXXXDLRRSHXXXXXXXXXXXXXXXXXXXXXXXKVVSRVLRM 558
+DPTL+ L ++RR KVVSRVLRM
Sbjct: 537 PVDPTLVHLMKKVNTKKKTKLKEMRRGGKYMRKKKMSIEEEMEILMGLIDLKVVSRVLRM 596
Query: 559 SDLSEEQLHWCEEKMSKVRVMDGK--LQRDSTPLFFPAH 595
++++EE LHWCEEKMSKV+++ G LQRDSTPLFFP H
Sbjct: 597 NEMNEENLHWCEEKMSKVKIIQGGKVLQRDSTPLFFPPH 635
>AT3G20260.1 | Symbols: | Protein of unknown function (DUF1666) |
chr3:7064190-7065751 REVERSE LENGTH=437
Length = 437
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 146/323 (45%), Gaps = 22/323 (6%)
Query: 292 WESY-TVFQKYDEEMSFLDRISAQKLHETESLRSIKVAPRSISGRIVHKIST-------- 342
W + V++KY E M F DR+S+Q+L ET + K+S+
Sbjct: 117 WGGFDAVYEKYCERMLFFDRLSSQQLKET-GIGIAPSPSTPSPRSASKKLSSPFRCLSLK 175
Query: 343 -MNKKPDDTRH-------NPYHELEAAYVAQICITWEALNWNYKNFQSKRASRQDGDVGC 394
+ +D H +PY +LE AYVAQ+C+TWEAL+ Y S S Q C
Sbjct: 176 KFDVPEEDIEHLQPTEVDDPYQDLETAYVAQLCLTWEALHCQYTQL-SHLISCQPETPTC 234
Query: 395 PETIAXXXXXXXXXXXRYVENEPYEHGRRPEIYARMRHMAPKLLLVPEYRESDDDH--KE 452
A RY+ENEP+E G R E+YAR R+ PKLL P+ + SD K+
Sbjct: 235 YNHTAQLFQQFLVLLQRYIENEPFEQGSRSELYARARNAMPKLLQAPKIQGSDKKEMEKD 294
Query: 453 NSLKISSGSFLVIMEDGIRTFMNFLKADKEKPCQVLAAYFRRNRRGLIDPTLLRLXXXXX 512
+ + + ++E I TF FLK DK+KP + + N + T L L
Sbjct: 295 TGFMVLADDLIKVIESSILTFNVFLKMDKKKPNGGIHLFGNHNNNHVNSTTPLLLVQSSI 354
Query: 513 XXXXXXXXDL-RRSHXXXXXXXXXXXXXXXXXXXXXXXKVVSRVLRMSDLSEEQLHWCEE 571
+L +++ K+ +RVLRMS +S+EQL WCEE
Sbjct: 355 DKKRVKAKELSKKTKGLRKKSWPQTWEGVQLLFAAIDIKLATRVLRMSKISKEQLLWCEE 414
Query: 572 KMSKVRVMDGKLQRDSTPLFFPA 594
KM K+ GKLQR +P+ FP
Sbjct: 415 KMKKLNFSAGKLQRHPSPILFPC 437
>AT1G69610.1 | Symbols: | Protein of unknown function (DUF1666) |
chr1:26186954-26189349 FORWARD LENGTH=636
Length = 636
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 122/320 (38%), Gaps = 51/320 (15%)
Query: 293 ESYTVFQKYDEEMSFLDRISAQKLHETESLRSIKVAPRSISGRIVHKISTMNKKPDDTRH 352
E + V++ Y +M LD I +Q +H S+ +K+ S R +K P + H
Sbjct: 314 EIHKVYKNYAVKMRKLDVIDSQTMH---SISLLKLKDSSKPSR------NTDKPPKSSLH 364
Query: 353 N---PY------------------HELEAAYVAQICITWEALNWNYKN---FQSKRASRQ 388
P+ + E YV Q+C++WE L W Y F S+ + Q
Sbjct: 365 QNIWPFKKHTLECDPSERLVKEASRDFETVYVGQVCLSWEMLRWQYDKVLEFDSQVTTYQ 424
Query: 389 DGDVGCPETIAXXXXXXXXXXXRYVENEPYEHGRRPEIYARMRHMAPKLLLVPEYRESDD 448
+A R+VENEP+++ R E Y + R L +P R+
Sbjct: 425 YN------LVAGEFQLFQVLLQRFVENEPFQNSSRVETYLKNRRHFQNFLQIPLVRDDRS 478
Query: 449 DHK----ENSLKISSGSFLVIMEDGIRTFMNFLKADKEKPCQVLAAYFRRNR--RGLIDP 502
K E + + I+ + + F FL ADK++ ++ + + +D
Sbjct: 479 SKKKCRYEGEFAVKTEMLREIIRESMSVFWEFLCADKDEFTSMMKVSHQTQVSPQDSLDL 538
Query: 503 TLLRLXXXXXXXXXXXXXDLRRSHX------XXXXXXXXXXXXXXXXXXXXXXKVVSRVL 556
LL +++RS ++VSRV+
Sbjct: 539 ELLTDIRTHLQKKEKKLKEIQRSQSCIVKKLKKNESKSSIGVKDELLIAKIELRLVSRVM 598
Query: 557 RMSDLSEEQLHWCEEKMSKV 576
MS L+ E+LHWC+EK+ K+
Sbjct: 599 YMSKLTTEKLHWCQEKLEKI 618
>AT5G39785.2 | Symbols: | Protein of unknown function (DUF1666) |
chr5:15929257-15932215 FORWARD LENGTH=607
Length = 607
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 357 ELEAAYVAQICITWEALNWNYKNFQSKRASRQDGDVGCPETIAXXXXXXXXXXXRYVENE 416
ELE YV Q+C++WE L+W Y+ S G E +A R++ENE
Sbjct: 349 ELENVYVGQMCLSWEILHWQYEKAIELLESDVYGSRRYNE-VAGEFQQFQVLLQRFLENE 407
Query: 417 PYEHGRRPEIYARMRHMAPKLLLVPEYRESDDDHKENSLK----------ISSGSFLVIM 466
P+E R + Y + R + LL +P RE + K+N + I S + IM
Sbjct: 408 PFEEP-RVQHYIKRRCVLRNLLQIPVIREDGNKDKKNGRRRDYEENNDGVIKSDQLVEIM 466
Query: 467 EDGIRTFMNFLKADK 481
E+ IR F F++ DK
Sbjct: 467 EETIRLFWRFVRCDK 481
>AT5G39785.1 | Symbols: | Protein of unknown function (DUF1666) |
chr5:15929257-15932215 FORWARD LENGTH=606
Length = 606
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 357 ELEAAYVAQICITWEALNWNYKNFQSKRASRQDGDVGCPETIAXXXXXXXXXXXRYVENE 416
ELE YV Q+C++WE L+W Y+ S G E +A R++ENE
Sbjct: 349 ELENVYVGQMCLSWEILHWQYEKAIELLESDVYGSRRYNE-VAGEFQQFQVLLQRFLENE 407
Query: 417 PYEHGRRPEIYARMRHMAPKLLLVPEYRESDDDHKENSLK----------ISSGSFLVIM 466
P+E R + Y + R + LL +P RE + K+N + I S + IM
Sbjct: 408 PFEEP-RVQHYIKRRCVLRNLLQIPVIREDGNKDKKNGRRRDYEENNDGVIKSDQLVEIM 466
Query: 467 EDGIRTFMNFLKADK 481
E+ IR F F++ DK
Sbjct: 467 EETIRLFWRFVRCDK 481