Miyakogusa Predicted Gene

Lj2g3v0716030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0716030.1 Non Chatacterized Hit- tr|I1NFN3|I1NFN3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,31.38,1e-18,WAK_assoc,NULL,CUFF.35260.1
         (257 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18390.2 | Symbols:  | Protein kinase superfamily protein | c...   190   1e-48
AT5G38260.1 | Symbols:  | Protein kinase superfamily protein | c...    75   4e-14
AT1G18390.1 | Symbols:  | Protein kinase superfamily protein | c...    72   5e-13
AT1G66930.1 | Symbols:  | Protein kinase superfamily protein | c...    63   2e-10
AT1G66910.1 | Symbols:  | Protein kinase superfamily protein | c...    62   5e-10
AT1G67025.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...    57   1e-08
AT1G67000.1 | Symbols:  | Protein kinase superfamily protein | c...    55   4e-08
AT2G46495.1 | Symbols:  | RING/U-box superfamily protein | chr2:...    50   1e-06
AT5G53110.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    47   1e-05

>AT1G18390.2 | Symbols:  | Protein kinase superfamily protein |
           chr1:6327463-6329935 FORWARD LENGTH=654
          Length = 654

 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 144/238 (60%), Gaps = 12/238 (5%)

Query: 16  IVITTILF----LATTVLSVNPKFEACTPRSCGAGPFIKYPFWIPYEHESFCGYPHFEIT 71
           ++ T+I F    +AT  LS++PKF+AC P+SCG GP I YPF++  + ESFCGYP FE+T
Sbjct: 8   LLYTSIFFYFTIIATQTLSLDPKFKACEPKSCGKGPQISYPFYLSGKQESFCGYPSFELT 67

Query: 72  CIDNN--PILRTSNYDLLVKDISYSNSSFTAANIAVYEEKCSAPMYNYSLYQTPFSYSAE 129
           C D    P+L  S  + ++K+ISY   SF   N     + C  P+ N +L++TPF  +  
Sbjct: 68  CDDEEKLPVLGISGEEYVIKNISYLTQSFQVVNSKASHDPCPRPLNNLTLHRTPFFVNPS 127

Query: 130 NSNLSFFYNCTTKPL-DYPTYEVDCAKNATHY-SFAVFHKEAL-EHKNYSLNECQYMVNA 186
           + N +  YNC+   L D+ TY + CA+N +   SF VF ++ L + K  +   CQ +V+ 
Sbjct: 128 HINFTILYNCSDHLLEDFRTYPLTCARNTSLLRSFGVFDRKKLGKEKQIASMSCQKLVDV 187

Query: 187 PLNMNASVNFSSLLRMSYTEVLKMGFLLNWTAPDCQYCEKSGGRCGFDDYKFLCFCKD 244
           P+    + N S ++ M+Y E+LK GF+LNWTA  C  C  SGGRCG D  +F+C C D
Sbjct: 188 PV---LASNESDVMGMTYVEILKRGFVLNWTANSCFRCITSGGRCGTDQQEFVCLCPD 242


>AT5G38260.1 | Symbols:  | Protein kinase superfamily protein |
           chr5:15283692-15285837 REVERSE LENGTH=638
          Length = 638

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 20/250 (8%)

Query: 17  VITTILFLATTVLSVNPKFEACTPR-SCGAGPFIKYPFWIPYEHESFCGYPHFEITCIDN 75
           +I  +  + + VLSV+ + + C+P   CG    + YPFW P   E  CG+P F++ C  +
Sbjct: 16  IIWMLFVIPSCVLSVDERQKHCSPTFRCGKQTDLYYPFWSPDREE--CGHPVFKVNCSGD 73

Query: 76  NPILRTSNYDLLVKDISYSNSSFTAANIAVYEEKCSAPMYNYSLYQTPFSYSAENSNLSF 135
                 S     V +++Y +              C     N S+ Q    +  +    +F
Sbjct: 74  FAEFTISTVKFHVLEMNYESRIIRLVRTEYLNNLCPWHPENRSINQEVLPFLQDTELGTF 133

Query: 136 FYNCTTKPLDYPT----YEVDCAKNATHYSFAV------FHKEALEHKNYSLNECQYMVN 185
           +YNC+   +D        ++ C +     S+ V       ++  L+  + S   C+  V+
Sbjct: 134 YYNCSGPTVDELANGYIRQLGCDEEVGGKSYFVSSPSHPGNRAILDGLSAS---CERNVD 190

Query: 186 APLNMNASVNFSSLLRM-SYTEVLKMGFLLNWTAPDCQYCEKSGGRCGFDD--YKFLCFC 242
            P++ +A    ++   + +  +VL +GF L + + DC  C  S G CGF+     F+C+C
Sbjct: 191 IPVSRSAMETTATNQSLEAIKKVLDVGFELGFNS-DCSLCVASKGACGFNQSSKAFVCYC 249

Query: 243 KDKSYPKSCG 252
           KD+ +  +CG
Sbjct: 250 KDEPHEHTCG 259


>AT1G18390.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:6325876-6329935 FORWARD LENGTH=648
          Length = 648

 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 25/236 (10%)

Query: 30  SVNPKFEACTPR--SCGAGPFI----KYPFWIPYEHESFCGYPHFEITC-IDNNPILRTS 82
           S + ++E C  R  +CG+G  +     YPFW  +    FCG+  F+++C  D N  L   
Sbjct: 23  SADQQYEECRSRNLTCGSGHRVFESTTYPFWGGFNKPKFCGHSSFKLSCEGDQNLTLAIG 82

Query: 83  NYDLLVKDISYSNSSFTAANIAVYEEKCSAPMYNYSLYQTPFSYSAENSNLSFFYNCT-T 141
           N  L V   +  +   + A+ ++ +  C   ++N++  +  F+  +    +  F NC+  
Sbjct: 83  NITLRVVSANLEDHKISVADDSLLDGGC-LNIWNFN-GKNQFTLDSNTETIDVFVNCSGV 140

Query: 142 KPLDYPTYEVDCAKNATHYSFAVFHKEALEHKNYSLNECQYMVNAPLNMNASVNFSSLLR 201
            PL     ++ C +  ++     +H   +   + S   C      P+  +A         
Sbjct: 141 APL-----QISCEE--SYEDPVTYH---VLRSSDSDEGCMKYAEIPMLRSAKDELQR-SE 189

Query: 202 MSYTEVLKMGFLLNWTAPD--CQYCEKSGGRCG--FDDYKFLCFCKDKSYPKSCGD 253
           +++ E L+ GF L +   D  C+ C  SGG CG   D   F C C D+ +  SC D
Sbjct: 190 LTFVEALRKGFDLRYIMEDKACRRCIDSGGICGSALDSESFRCLCADRPHNSSCDD 245


>AT1G66930.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:24970523-24973069 FORWARD LENGTH=674
          Length = 674

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 22/240 (9%)

Query: 13  QLCIVITTILFLATTVLSVNPKFEA----CTPR-SCGAGPFIKYPFWIPYEHESFCGYPH 67
           Q+C  +T++    T V    P  +     C+ R SCG    + YPFWIP     +CG+P 
Sbjct: 42  QICCNVTSLSGGVTCVPQHQPSADELRRRCSERFSCGNQRNLYYPFWIP--GREYCGHPD 99

Query: 68  FEITCIDNNPILRTSNYDLLVKDISYSNSSFTAANIAVYEEKCSA-PMYNYSLYQTPFSY 126
           F++ C      L  ++ +  + ++SY +S+   A      + C   P+ +  L +T   +
Sbjct: 100 FKLDCSGGFAELNIASVNFRILNMSYDSSNKRLARSDYLNDLCPPNPLNDEPLIETVLQF 159

Query: 127 SAENSNLSFFYNC-----TTKPLDYPTY---EVDCAKNATHYSFAVFHKEALEHKNYSLN 178
           SA+   L+ +Y+C      T P  +P+    E+ C +  ++Y         L+     LN
Sbjct: 160 SADTELLTLYYDCQLNSSATSP--FPSSYFGELGCDEGRSYYVTRNLSSPLLDRFRGVLN 217

Query: 179 ECQYMVNAPLNMNASV-NFSSLLRMSYTEVLKMGFLLNWTAPD---CQYCEKSGGRCGFD 234
             + M    +++ AS    ++L     +  LKM     +   D   C  C  SGG CG++
Sbjct: 218 NLREMCKRKVSVPASGPALNTLQTNPNSNNLKMALEHGFELQDNSNCSMCVLSGGSCGYN 277


>AT1G66910.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:24961634-24963941 REVERSE LENGTH=666
          Length = 666

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 99/241 (41%), Gaps = 29/241 (12%)

Query: 28  VLSVNPKFEACTPR-SCGAGPFIKYPFWIPYEHESFCGYPHFEITCIDNNPILRTSNYDL 86
           VLS +     C+P  +CG    + YPFWI    E  CG+P FE+ C    P L  S+   
Sbjct: 28  VLSADGNHILCSPSFTCGNQRGLLYPFWIAGRKE--CGHPDFELDCNAGVPELSISSVKF 85

Query: 87  LVKDISYSNSSFTAANIAVYEEKCSAPMYNYSLYQTPFSYSAENSNLSFFYNCT------ 140
            +    Y +   T A     ++ C    +  S  +T    ++    L+ +Y+C       
Sbjct: 86  RILGADYDSGIITLARSDNIDDPCLPNSFTTSFNETVLPLASTTDLLTIYYDCNRNVSSF 145

Query: 141 ----TKPLDYPTYEVDCAKNATHYSFAVFHKEA--LEHKNYSLNE----CQYMVNAPLNM 190
                K LD P    D  +N        F   +  LE  ++ LN+    C   V+ P + 
Sbjct: 146 VSTFVKELDCPDDGTDDRRNYYLTRNLTFLPPSLKLEGNSFLLNDFGGSCSRNVSNPASR 205

Query: 191 NASVNFSSLLRMSYTEVLKM----GFLLNWTAPDCQYCEKSGGRCGFDDY--KFLCFCKD 244
            A    ++L     T+ LK+    GF L   + DC+ C  S G CGF     +F+C+ + 
Sbjct: 206 TA---LNTLESTPSTDNLKIALEDGFALEVNS-DCRTCIDSKGACGFSQTSSRFVCYYRQ 261

Query: 245 K 245
           +
Sbjct: 262 E 262


>AT1G67025.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: Protein kinase superfamily protein
           (TAIR:AT1G18390.1); Has 221 Blast hits to 191 proteins
           in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0;
           Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes -
           0 (source: NCBI BLink). | chr1:25013344-25014435 REVERSE
           LENGTH=221
          Length = 221

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 35/215 (16%)

Query: 47  PFIKYPFWIPYEHESFCGYPHFEITCIDN-NPILRTSNYDLLVKDISYSNSSFTAANIAV 105
           P + YPFW      ++CG   F++TC +N N  L  +N  L V      N + T  + ++
Sbjct: 15  PNVTYPFW-GVNKPNYCGQTEFQLTCKNNQNLTLVLTNLSLQVISFDLENQTLTVVDESL 73

Query: 106 YEEKCSAPMYNYSLYQTPFSYSAENSNLSFFYNCTTKPLDYPTYEVDCAKN----ATHYS 161
           +E +C +   N++     F+ +     +  F  C    +  P     C K+     T+Y+
Sbjct: 74  FEGRCPSMSLNFT-GANQFTIAPTVEKIDLFI-CPASQMVSPLSAFTCRKSNGEIVTYYA 131

Query: 162 FAVFHKEALEHKNYSLNECQYMVNAPLNMNASVNFSSLL------RMSYTEVLKMGFLLN 215
           F           + S+ +C  M   P+        SSLL      R+   E L  GF L 
Sbjct: 132 F---------KPSDSVTDCVKMGEYPV-------LSSLLDEFQRSRLKLKEALVKGFDLR 175

Query: 216 WTAPD---CQYCEKSGGRCGFDDY--KFLCFCKDK 245
           +   D   C+ C  S G CG +     F C C DK
Sbjct: 176 FNIRDDQSCRGCSNSHGVCGSEPVSGSFQCLCYDK 210


>AT1G67000.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:25004217-25007604 REVERSE LENGTH=892
          Length = 892

 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 31/223 (13%)

Query: 42  SCGAGPFIKYPFWIPYEHESFCGYPHFEITCIDNNPILRTSNYDLLVKDISYSNSSFTAA 101
           SCG+   + YP W P   E  CG+P+F++ C      +  ++    + D SY  S    A
Sbjct: 259 SCGSQRDLNYPLWKPGREE--CGHPNFKLNCSGGFAEINIASVKFRILD-SY-RSLIRLA 314

Query: 102 NIAVYEEKC-----SAPMYNYSLYQTPFSYSAENSNLSFFYNCTTKPLDYP----TYEVD 152
                 + C     +AP     L       + E   L+ +Y C     D P      E+ 
Sbjct: 315 RSDYIGDLCPANPLTAPFIEKFL--PVLELTGETELLTLYYGCRFNSSDIPANIYVGELG 372

Query: 153 CAKNATHYSFAVFHKEALEHKNYSLNE----CQYMVNAPLNMNASVNFSSL-----LRMS 203
           C +  ++Y         L+     LN     C+  V+ P +  A  +  +      L+M+
Sbjct: 373 CDEGRSYYVTRNLSSPLLDSSRGVLNNLREMCKRNVSVPASGPALFDLQTRPNQDNLKMA 432

Query: 204 YTEVLKMGFLLNWTAPDCQYCEKSGGRCGFDDYK--FLCFCKD 244
               L  GF +  T+ DC+ C  SGG CG++     F C+CKD
Sbjct: 433 ----LDQGFRMLITS-DCERCRGSGGACGYNQTSSGFGCYCKD 470


>AT2G46495.1 | Symbols:  | RING/U-box superfamily protein |
           chr2:19084134-19085704 REVERSE LENGTH=372
          Length = 372

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 22/206 (10%)

Query: 36  EACTPRSCGAGPF-IKYPFWIPYEHESFCGYPHFEITCIDN-NPILRTSNYD-LLVKDIS 92
           + C+  SCG     +++PFW+  +    CG+  F + C  +    L+  N    LV++I 
Sbjct: 24  QQCSSSSCGRDDVHVRFPFWLLSKQPELCGHAGFNLQCTASPKTALKLPNSGTFLVREID 83

Query: 93  YSNSSFTAANIAVYE-EKCSA-PMYNYSLYQTPFSYSAENSNLSFFYNCTTKPLDYPTYE 150
           Y      +  I +Y+ E C A  +  + + ++PFS     S    F +C  +      ++
Sbjct: 84  Y-----LSQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYT--FLSCPNEVAKSSRFD 136

Query: 151 -VDCAKNATHYSFAVFHKEALEHKNYSLNECQYM--VNAPLNMNASVNFSSLLRMSYTEV 207
            + C  N+T    A     +L+     L  CQ +  ++ P++       S   R S T+V
Sbjct: 137 SIPCLGNSTTSFLAT---TSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKS---RFS-TDV 189

Query: 208 LKMGFLLNWTAPDCQYCEKSGGRCGF 233
                 L W +P C  CE+   RCGF
Sbjct: 190 NDKDLWLKWDSPSCSDCERDFLRCGF 215


>AT5G53110.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:21529022-21533008 FORWARD LENGTH=382
          Length = 382

 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 12/192 (6%)

Query: 46  GPFIKYPFWIPYEHESFCGYPH-FEITCIDNNPILRTSNYDLLVKDISYSNSSFTAANIA 104
           GP I++PF + ++    CGY   F++TC D N   RT+       + +     + A  I 
Sbjct: 39  GPIIRFPFRLKHQQSHSCGYDKGFDLTC-DINAGNRTTITLPFSGNFTVEEIDYAAQEIW 97

Query: 105 VYEEKCSAP--MYNYSLYQTPFSYSAENSNLSFFYNCTTKPLDY-PTYEVDCAKNATHYS 161
           + +     P  +   +L  TPFS        +FF   T++ L + P   + C        
Sbjct: 98  INDPNNCLPQRILQLNLNSTPFS-GVYMRQFTFFNCPTSEYLRFRPLNPITCLSGKNSTV 156

Query: 162 FAVFHKEALEHKNYSLNECQYMVNAPLNMNASVNFSSLLRMSYTEVLKMGFLLNWTAPDC 221
           FA      + +   S   C+ M      +   V +    ++  +  L     L W  P C
Sbjct: 157 FATPSPRVINY--LSSQSCRLMKT----VYVPVRWPFYEQIVSSSDLSDNLWLTWRVPRC 210

Query: 222 QYCEKSGGRCGF 233
             CE  GG+CG 
Sbjct: 211 SRCEIKGGKCGI 222