Miyakogusa Predicted Gene

Lj2g3v0704890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0704890.1 Non Chatacterized Hit- tr|Q6KA54|Q6KA54_ORYSJ
Putative uncharacterized protein OJ1115_D03.33
OS=Oryz,46.85,5e-18,alpha/beta-Hydrolases,NULL;
Chlorophyllase,Chlorophyllase; no description,NULL,CUFF.35245.1
         (317 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19670.1 | Symbols: ATCLH1, CORI1, ATHCOR1, CLH1 | chlorophyl...   294   5e-80
AT5G43860.1 | Symbols: ATCLH2, CLH2 | chlorophyllase 2 | chr5:17...   255   2e-68

>AT1G19670.1 | Symbols: ATCLH1, CORI1, ATHCOR1, CLH1 |
           chlorophyllase 1 | chr1:6803796-6804923 REVERSE
           LENGTH=324
          Length = 324

 Score =  294 bits (753), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 163/307 (53%), Positives = 200/307 (65%), Gaps = 15/307 (4%)

Query: 10  LATTDVFQTGDIKWKHFNVD----TSNTCPKPLLVFTPTVPGTYPVILFCHGFCVLNSFY 65
           + T   F+ G +      VD     S   PKP+ +  PTV GTYPV+LF HGF + N FY
Sbjct: 13  VVTPAAFEIGSLPTTEIPVDPVENDSTAPPKPVRITCPTVAGTYPVVLFFHGFYLRNYFY 72

Query: 66  SSLLAHITSHGFIVVAPQLFCMGLPMLGLCEVKFAGKVADWITEGLQAQLTKHVNENIEA 125
           S +L HI SHG+I+VAPQL C  LP  G  EV  AG V +W +E L+A L   VN N   
Sbjct: 73  SDVLNHIASHGYILVAPQL-CKLLPPGGQVEVDDAGSVINWASENLKAHLPTSVNAN--G 129

Query: 126 KLESLILAGHSRGGKTAFAVALGYAKT---NLKFSALIGIDPVAGLSKCKICRTLPHILT 182
           K  SL+  GHSRGGKTAFAVALG+A T   ++ FSALIGIDPVAG +K    RT PHILT
Sbjct: 130 KYTSLV--GHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAGTNK--YIRTDPHILT 185

Query: 183 GVPQSFNLNMPVVVIGTGLGPEKASCCSPPCAPDGVNHVEFFTECKPPCAHFITTEYGHM 242
             P+SF L++PV V+GTGLGP K +   PPCAP  +NH EF+ ECK   AHF+  +YGHM
Sbjct: 186 YKPESFELDIPVAVVGTGLGP-KWNNVMPPCAPTDLNHEEFYKECKATKAHFVAADYGHM 244

Query: 243 DMLDDDTPGIIGGTVKCICKNGTGPKDLMRRTVGGLVVAFLRAYLSAQWKDLNAILADPS 302
           DMLDDD PG +G    C+CKNG   K  MR  VGG+VVAFL+  L  +  ++  I+ DPS
Sbjct: 245 DMLDDDLPGFVGFMAGCMCKNGQRKKSEMRSFVGGIVVAFLKYSLWGEKAEIRLIVKDPS 304

Query: 303 IAPAKLD 309
           ++PAKLD
Sbjct: 305 VSPAKLD 311


>AT5G43860.1 | Symbols: ATCLH2, CLH2 | chlorophyllase 2 |
           chr5:17630492-17632184 FORWARD LENGTH=318
          Length = 318

 Score =  255 bits (652), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/304 (46%), Positives = 189/304 (62%), Gaps = 26/304 (8%)

Query: 11  ATTDVFQTGDIKWKHFNVDTSNTC-------------PKPLLVFTPTVPGTYPVILFCHG 57
           ++ + F+ G  K     +D+S+ C             PK LLV TP   G YPV++  HG
Sbjct: 5   SSRNAFEDGKYKSNLLTLDSSSRCCKITPSSRASPSPPKQLLVATPVEEGDYPVVMLLHG 64

Query: 58  FCVLNSFYSSLLAHITSHGFIVVAPQLFCMGLPMLGLCEVKFAGKVADWITEGLQAQLTK 117
           + + NSFYS L+ H++SHGFI++APQL+ +  P   + E+K   ++ DW++ GL   L  
Sbjct: 65  YLLYNSFYSQLMLHVSSHGFILIAPQLYSIAGPDT-MDEIKSTAEIMDWLSVGLNHFLPA 123

Query: 118 HVNENIEAKLESLILAGHSRGGKTAFAVAL---GYAKTNLKFSALIGIDPVAGLSKCKIC 174
            V  N    L    L+GHSRGGKTAFAVAL   GY+ +NLK S LIGIDPV G  K K  
Sbjct: 124 QVTPN----LSKFALSGHSRGGKTAFAVALKKFGYS-SNLKISTLIGIDPVDGTGKGK-- 176

Query: 175 RTLPHILTGVPQSFNLN-MPVVVIGTGLGPEKASCCSPPCAPDGVNHVEFFTECKPPCAH 233
           +T P +L  +P SF+L+  P++VIG+GLG    +   PPCAP GVNH EFF EC+ P  H
Sbjct: 177 QTPPPVLAYLPNSFDLDKTPILVIGSGLGETARNPLFPPCAPPGVNHREFFRECQGPAWH 236

Query: 234 FITTEYGHMDMLDDDTPGIIGGTVKCICKNGTGPKDLMRRTVGGLVVAFLRAYLSAQWKD 293
           F+  +YGH+DMLDDDT GI G +  C+CKNG   +  MRR VGGLVV+FL+AYL    ++
Sbjct: 237 FVAKDYGHLDMLDDDTKGIRGKSSYCLCKNGE-ERRPMRRFVGGLVVSFLKAYLEGDDRE 295

Query: 294 LNAI 297
           L  I
Sbjct: 296 LVKI 299