Miyakogusa Predicted Gene
- Lj2g3v0694690.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0694690.1 Non Chatacterized Hit- tr|I1L494|I1L494_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50419
PE,64.27,0,OS08G0151700 PROTEIN,NULL; RING FINGER CONTAINING
PROTEIN,NULL; no description,Zinc finger, RING/FYV,CUFF.35240.1
(366 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 230 1e-60
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 178 5e-45
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 124 1e-28
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 121 9e-28
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 121 9e-28
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 121 9e-28
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 120 1e-27
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 119 4e-27
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 119 4e-27
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 116 3e-26
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 116 3e-26
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 112 3e-25
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:... 112 3e-25
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 110 1e-24
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 110 1e-24
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 105 4e-23
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 103 3e-22
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 103 3e-22
AT2G37150.2 | Symbols: | RING/U-box superfamily protein | chr2:... 96 5e-20
AT2G37150.1 | Symbols: | RING/U-box superfamily protein | chr2:... 96 5e-20
AT2G37150.3 | Symbols: | RING/U-box superfamily protein | chr2:... 95 7e-20
AT1G36950.1 | Symbols: | RING/U-box superfamily protein | chr1:... 75 6e-14
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 75 1e-13
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 75 1e-13
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 74 1e-13
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 74 2e-13
AT4G00070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 72 4e-13
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 69 7e-12
AT3G47180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 66 4e-11
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 60 2e-09
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 59 5e-09
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 59 5e-09
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 1e-08
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 57 3e-08
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 57 3e-08
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 57 3e-08
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 57 3e-08
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 56 4e-08
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 56 5e-08
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 56 5e-08
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 54 1e-07
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 1e-07
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 54 1e-07
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 53 3e-07
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 3e-07
AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |... 53 3e-07
AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |... 53 3e-07
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 53 3e-07
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 3e-07
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 4e-07
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 53 4e-07
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 5e-07
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 52 5e-07
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 6e-07
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 52 7e-07
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 8e-07
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 52 9e-07
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 1e-06
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 51 1e-06
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 51 1e-06
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 51 1e-06
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 51 2e-06
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 2e-06
AT5G07225.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 2e-06
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 50 2e-06
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 2e-06
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 2e-06
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 50 2e-06
AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B | chr2:... 50 3e-06
AT4G23450.1 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 50 3e-06
AT4G23450.3 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 50 3e-06
AT4G23450.2 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 50 3e-06
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 3e-06
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 50 3e-06
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 3e-06
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 50 3e-06
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 3e-06
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 4e-06
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 4e-06
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 49 4e-06
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 5e-06
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 49 5e-06
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 5e-06
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 5e-06
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 5e-06
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 5e-06
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 49 5e-06
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 49 5e-06
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 6e-06
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 6e-06
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 49 6e-06
AT5G41350.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 6e-06
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 49 7e-06
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 49 7e-06
AT5G01980.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 7e-06
AT1G51930.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 8e-06
AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A | chr2:1656750... 48 1e-05
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 175/294 (59%), Gaps = 39/294 (13%)
Query: 100 FRGLGCTAGASQQVSVPAVIRSSADWQAXXXXXXXXX------XNSDRNNRT-----ECP 148
FRGLGCT ASQQVSVPAVIRSSADW A +S N + E
Sbjct: 72 FRGLGCTTSASQQVSVPAVIRSSADWDASNFKIKKTKKKNKNKGSSSYNGGSIKILSEAS 131
Query: 149 CHGSATCVDFQDVWCSPGIG---------SVDCVVA---RKNVSSRLKLDAERIT----- 191
S C DVWC PG+G S+D VV+ R+N+ R K+D ++
Sbjct: 132 TSSSVACAAIPDVWCGPGVGFSTDAVVGGSIDTVVSDPPRRNIPVRRKIDGDKTNSNSNN 191
Query: 192 HRE-RPSYLARRMVNPESISFLDDDSDVFPIRPA---RFYRH-NIPHPSADHLAEIVKIQ 246
HRE S L RR +N ES + D DS R R++RH +P+P D LAE++ +Q
Sbjct: 192 HREGSSSLLPRRSLNQESNPYFDSDSSFLTSRAEQTDRYHRHLRLPYP--DGLAEMMMMQ 249
Query: 247 -GRLMGGRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFI 305
G +MGG L+S DQFRD RL++DNM+YEQLLELGE+IG+VNTG+ E +++ +RK+K
Sbjct: 250 NGFVMGGVLSSFDQFRDMRLNVDNMTYEQLLELGERIGHVNTGLTEKQIKSCLRKVKPCR 309
Query: 306 SNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCK 359
+ T DRKC ICQ+EYE+ DE+G+L+C H FH C+ QWLV KN CPVCK
Sbjct: 310 QDTTVA---DRKCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCK 360
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 191/379 (50%), Gaps = 57/379 (15%)
Query: 18 VVTQHIKWRRPRSHFRQRISETDPSPQLS----PITQSTR-CKXXXXXXXXXXXXXXNET 72
+ +HI+ RR R+ + + D P LS PI+Q R C NE+
Sbjct: 5 TIGEHIRLRRARNQTIRHLHAADDDPPLSHVVLPISQPNRFCNSAMSSFFPLPTSSSNES 64
Query: 73 THDSGQNRKQRKXXXXXXXXXXXXXXXFRGLGC---TAGASQQVSVPAVIRSSADWQAXX 129
T RK+ FRG+GC A A+Q+VSVP+VIR SAD A
Sbjct: 65 T------RKK-----------PYQTSSFRGMGCYAAAAAAAQEVSVPSVIRYSADLDARI 107
Query: 130 XXXXXXXXNSDRNNRTECPCH---GSATCV-----DFQDVWCSPGIG-SVDCVVAR---- 176
+ + + + GS + D DVWC PG+G S D V+ R
Sbjct: 108 RKDKKKKKHKHKKKKKKNKGSYEDGSIRILSEEARDVIDVWCRPGLGFSTDAVIGRSVDP 167
Query: 177 ---KNV-SSRLKLDAER--ITHRERPSYLARRMVNPESISFLDDDSDVFPIRPARFY--- 227
+N+ SSR K+D + H S L R +N E+ S +SD + +R
Sbjct: 168 PRGRNIPSSRRKIDVDNNNYNHTLGSSVLPIRFLNQETHSHDIFNSDSTFVTSSRAEPTM 227
Query: 228 -----RHNIPHPSADHLAEIVKIQGRLMGGRL-NSHDQFRDWRLDIDNMSYEQLLELGEK 281
R ++P D L E+ +Q + GR+ +S D + + RLD+D+MSYEQLLELG++
Sbjct: 228 LSSRCRGHLPRSYPDDLTEMRMLQNGFVMGRITDSRDNYHELRLDVDSMSYEQLLELGDR 287
Query: 282 IGYVNTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFH 341
IGYVNTG+KE E+ + K+K +S+ +DRKC+ICQ+EYE +DE+G+L C H FH
Sbjct: 288 IGYVNTGLKESEIHRCLGKIKPSVSHTL----VDRKCSICQDEYEREDEVGELNCGHSFH 343
Query: 342 FQCIKQWLVLKNFCPVCKQ 360
C+KQWL KN CPVCK+
Sbjct: 344 VHCVKQWLSRKNACPVCKK 362
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 252 GRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSK 311
G HD+ RD RLD+DNMSYE+LL LGE+IG V+TG+ E E+ L + K S+
Sbjct: 554 GMAEMHDRHRDMRLDVDNMSYEELLALGERIGDVSTGLSE-EVILKVMKQHKHTSSAAGS 612
Query: 312 HQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCK 359
HQ C +CQEEY D+LG L C H FH C+KQWL+LKN CP+CK
Sbjct: 613 HQDMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICK 660
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 252 GRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSK 311
G + HD+ R+ RLD+DNMSYE+LL LGE+IG V+TG+ E+ + +++ K S+ +S
Sbjct: 588 GMTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSV 647
Query: 312 --HQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
HQ C ICQEEY D LG LKC H FH CIKQW+++KN CP+CK E +
Sbjct: 648 ELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 252 GRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSK 311
G + HD+ R+ RLD+DNMSYE+LL LGE+IG V+TG+ E+ + +++ K S+ +S
Sbjct: 588 GMTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSV 647
Query: 312 --HQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
HQ C ICQEEY D LG LKC H FH CIKQW+++KN CP+CK E +
Sbjct: 648 ELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 252 GRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSK 311
G + HD+ R+ RLD+DNMSYE+LL LGE+IG V+TG+ E+ + +++ K S+ +S
Sbjct: 588 GMTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSV 647
Query: 312 --HQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
HQ C ICQEEY D LG LKC H FH CIKQW+++KN CP+CK E +
Sbjct: 648 ELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 87/126 (69%), Gaps = 9/126 (7%)
Query: 242 IVKIQGRLMGGRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDE----MELN 297
++ G L+GG L+ HDQ RD RLDIDNMSYE+LL L E+IG V+T + E+ ++ +
Sbjct: 365 LIMETGLLLGG-LSFHDQHRDMRLDIDNMSYEELLALEERIGTVSTALTEEAISKCLKTS 423
Query: 298 IRKLKLF----ISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKN 353
I ++K I+ S ++ D KC+ICQEEY DE+G+L CEH +H +C+++WL +K+
Sbjct: 424 IYQMKPLSYGSITKSPSDNKEDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKS 483
Query: 354 FCPVCK 359
+CP+CK
Sbjct: 484 WCPICK 489
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 241 EIVKIQGRLMG-GRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIR 299
++ I+ L G +DQ RD RLDIDNMSYE+LL LG+K+G V+T + E+ + +++
Sbjct: 393 QLASIETNLFSSGMFRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEALSRSLK 452
Query: 300 KLKLFISNDTSKHQL----DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFC 355
+ +++T L D KC+ICQEEY DELG + C+H +H C++QWL +KN+C
Sbjct: 453 QSIYQETDETGSISLYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWC 512
Query: 356 PVCK 359
P+CK
Sbjct: 513 PICK 516
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 241 EIVKIQGRLMG-GRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIR 299
++ I+ L G +DQ RD RLDIDNMSYE+LL LG+K+G V+T + E+ + +++
Sbjct: 393 QLASIETNLFSSGMFRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEALSRSLK 452
Query: 300 KLKLFISNDTSKHQL----DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFC 355
+ +++T L D KC+ICQEEY DELG + C+H +H C++QWL +KN+C
Sbjct: 453 QSIYQETDETGSISLYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWC 512
Query: 356 PVCK 359
P+CK
Sbjct: 513 PICK 516
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Query: 249 LMGGRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISND 308
+ G + HDQ RD RLDIDNMSYE+LL L EK+G V+T + E+ + L K ++ ND
Sbjct: 395 FLNGMSSFHDQHRDMRLDIDNMSYEELLALEEKMGTVSTALSEEAL-LKSLKSSIYRPND 453
Query: 309 TS-----KHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCK 359
S D KC+ICQEEY DE+G L C+H +H C +QWL +KN+CP+CK
Sbjct: 454 ESDDICLNKDDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Query: 249 LMGGRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISND 308
+ G + HDQ RD RLDIDNMSYE+LL L EK+G V+T + E+ + L K ++ ND
Sbjct: 395 FLNGMSSFHDQHRDMRLDIDNMSYEELLALEEKMGTVSTALSEEAL-LKSLKSSIYRPND 453
Query: 309 TS-----KHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCK 359
S D KC+ICQEEY DE+G L C+H +H C +QWL +KN+CP+CK
Sbjct: 454 ESDDICLNKDDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Query: 257 HDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSKHQLDR 316
HD++RD RLD+DNMSYE+LL L E+IG V TGV E+ + +++ K + SN T Q
Sbjct: 578 HDRYRDMRLDVDNMSYEELLALEERIGDVCTGVNEETISNRLKQRK-YKSN-TKSPQDAE 635
Query: 317 KCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCK 359
C +CQEEY +++G L+C H FH QCIK+WL KN CP+CK
Sbjct: 636 PCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICK 678
>AT2G15530.4 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777899 FORWARD LENGTH=780
Length = 780
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Query: 252 GRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSK 311
G + HD+ R+ RLD+DNMSYE+LL LGE+IG V+TG+ E+ + +++ K S+ +S
Sbjct: 588 GMTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSV 647
Query: 312 --HQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCK 359
HQ C ICQEEY D LG LKC H FH CIKQW+++KN CP+ +
Sbjct: 648 ELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPIFR 697
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 94/157 (59%), Gaps = 9/157 (5%)
Query: 217 DVFPIRPARFYRHNIPHPSADHLAEIVKIQ-GRLMGGRLNSH-DQFRDWRLDIDNMSYEQ 274
D P+ R +R +P E+ ++ G +GG N+H D RD RLDI+ MSYE+
Sbjct: 332 DSVPVATLRQHRGGVPRLRVMPDDEVALLEFGDFLGGSGNNHIDHHRDMRLDIEEMSYEE 391
Query: 275 LLELGEKIGYVNTGVKEDEMELNIR-------KLKLFISNDTSKHQLDRKCTICQEEYES 327
LL L E+IG VNTG+ E++++ +++ + S+ +K CTICQE +++
Sbjct: 392 LLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEPCTICQESFKN 451
Query: 328 DDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVVV 364
++++ L C H +H +C+++WL++KN CP+CK E +V
Sbjct: 452 EEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEALV 488
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 94/157 (59%), Gaps = 9/157 (5%)
Query: 217 DVFPIRPARFYRHNIPHPSADHLAEIVKIQ-GRLMGGRLNSH-DQFRDWRLDIDNMSYEQ 274
D P+ R +R +P E+ ++ G +GG N+H D RD RLDI+ MSYE+
Sbjct: 332 DSVPVATLRQHRGGVPRLRVMPDDEVALLEFGDFLGGSGNNHIDHHRDMRLDIEEMSYEE 391
Query: 275 LLELGEKIGYVNTGVKEDEMELNIR-------KLKLFISNDTSKHQLDRKCTICQEEYES 327
LL L E+IG VNTG+ E++++ +++ + S+ +K CTICQE +++
Sbjct: 392 LLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEPCTICQESFKN 451
Query: 328 DDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVVV 364
++++ L C H +H +C+++WL++KN CP+CK E +V
Sbjct: 452 EEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEALV 488
>AT1G45180.1 | Symbols: | RING/U-box superfamily protein |
chr1:17099335-17101683 FORWARD LENGTH=645
Length = 645
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Query: 239 LAEIVKIQGRLMGGRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNI 298
L +++ + +M G + HD++RD RLD+DNM+YE+LL L E+IG V TG+ E+ + +
Sbjct: 515 LEDVMLLNQSIMLGAADIHDRYRDMRLDVDNMTYEELLSLEERIGDVCTGLNEETISNRL 574
Query: 299 RKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVC 358
++ K + S+ S +++ C +CQEEY+ ++E+G+L+C H FH QCIK+WL KN CP+C
Sbjct: 575 KQQK-YKSSTRSSQEVE-PCCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPIC 632
Query: 359 K 359
K
Sbjct: 633 K 633
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Query: 223 PARFYRH-NIPHPSADHLAEIVKIQGRLMGGRLNSHDQFRDWRLDIDNMSYEQLLELGEK 281
PA RH +PH A E + +N D +D RLDI++MSYE+LL L ++
Sbjct: 329 PAAILRHRELPHFRAMPANENAFWEVGDFYNAVNYVDHHQDMRLDIEDMSYEELLALSDQ 388
Query: 282 IGYVNTGVK-EDEMELNIRKL--KLFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEH 338
IG V TG+ ED EL R+ ++ + S CTICQE Y+++D++ L C H
Sbjct: 389 IGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDSCTICQENYKNEDKIATLDCMH 448
Query: 339 CFHFQCIKQWLVLKNFCPVCKQEVVV 364
+H +C+K+WLV+KN CP+CK E +V
Sbjct: 449 KYHAECLKKWLVIKNVCPICKSEALV 474
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Query: 223 PARFYRH-NIPHPSADHLAEIVKIQGRLMGGRLNSHDQFRDWRLDIDNMSYEQLLELGEK 281
PA RH +PH A E + +N D +D RLDI++MSYE+LL L ++
Sbjct: 329 PAAILRHRELPHFRAMPANENAFWEVGDFYNAVNYVDHHQDMRLDIEDMSYEELLALSDQ 388
Query: 282 IGYVNTGVK-EDEMELNIRKL--KLFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEH 338
IG V TG+ ED EL R+ ++ + S CTICQE Y+++D++ L C H
Sbjct: 389 IGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDSCTICQENYKNEDKIATLDCMH 448
Query: 339 CFHFQCIKQWLVLKNFCPVCKQEVVV 364
+H +C+K+WLV+KN CP+CK E +V
Sbjct: 449 KYHAECLKKWLVIKNVCPICKSEALV 474
>AT2G37150.2 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 73/113 (64%), Gaps = 4/113 (3%)
Query: 252 GRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSK 311
G N D RD RLDIDNMSYE+LL+LGE+IG VNTG+ + + + + S T +
Sbjct: 429 GSRNMLDHHRDMRLDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTEE 488
Query: 312 HQLDRKCTICQEEYESDDELGKLK-CEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
RKC IC EEY+ +ELG++K C H +H +CIK+WL +KN CP+CK +
Sbjct: 489 ---QRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPAL 538
>AT2G37150.1 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 73/113 (64%), Gaps = 4/113 (3%)
Query: 252 GRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSK 311
G N D RD RLDIDNMSYE+LL+LGE+IG VNTG+ + + + + S T +
Sbjct: 429 GSRNMLDHHRDMRLDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTEE 488
Query: 312 HQLDRKCTICQEEYESDDELGKLK-CEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
RKC IC EEY+ +ELG++K C H +H +CIK+WL +KN CP+CK +
Sbjct: 489 ---QRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPAL 538
>AT2G37150.3 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15607600 REVERSE LENGTH=599
Length = 599
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 73/113 (64%), Gaps = 4/113 (3%)
Query: 252 GRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSK 311
G N D RD RLDIDNMSYE+LL+LGE+IG VNTG+ + + + + S T +
Sbjct: 482 GSRNMLDHHRDMRLDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTEE 541
Query: 312 HQLDRKCTICQEEYESDDELGKLK-CEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
RKC IC EEY+ +ELG++K C H +H +CIK+WL +KN CP+CK +
Sbjct: 542 ---QRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPAL 591
>AT1G36950.1 | Symbols: | RING/U-box superfamily protein |
chr1:14009673-14010822 REVERSE LENGTH=226
Length = 226
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Query: 258 DQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSKHQ--LD 315
D +++ R+D D+M+YEQLL+L +GY N+ VK ++ R K S+ Q D
Sbjct: 24 DPYQELRMDTDHMTYEQLLQLCNSMGYENSSVKASNIDRCFRNTK------PSEFQSLAD 77
Query: 316 RKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQ 360
+ C ICQ+ ++ +GKL C H FH +K W++ K CPVC++
Sbjct: 78 KICCICQDRFQRRAGVGKLNCGHNFHINSVKPWILTKKQCPVCQK 122
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 263 WRLDID--NMSYEQLLELGEKIGYVNTGVKEDEME-LNIRKLKLFISNDTSKHQLDRKCT 319
W+ DID M+YE+L+ELGE +G + G+ ++ +E L +K K + S+ + +C
Sbjct: 141 WQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKF--GSIFSRKRAGERCV 198
Query: 320 ICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
ICQ +Y+ + L C+H +H +CI +WL + CPVC EV
Sbjct: 199 ICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 263 WRLDID--NMSYEQLLELGEKIGYVNTGVKEDEME-LNIRKLKLFISNDTSKHQLDRKCT 319
W+ DID M+YE+L+ELGE +G + G+ ++ +E L +K K + S+ + +C
Sbjct: 141 WQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKF--GSIFSRKRAGERCV 198
Query: 320 ICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
ICQ +Y+ + L C+H +H +CI +WL + CPVC EV
Sbjct: 199 ICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 268 DNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYES 327
D +YE+LL + ++ G TG+ E+ ++ N+ + K +D ++C ICQ++ +
Sbjct: 181 DIFTYEELLSITDETGDERTGLSEEVIDENLIRRKYEKRSDDET----KRCVICQQKLKD 236
Query: 328 DDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
++E+ KL C H FHF CIK WL++ N CP+C +EVV
Sbjct: 237 NEEVSKLGCGHDFHFGCIKNWLMVTNKCPLCNREVV 272
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 256 SHDQFRDW-RLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKL--KLFISNDTSKH 312
SH W +D D +SYE+LL LG+ +G + G+ D I L K + D +++
Sbjct: 228 SHTSQDAWDEMDPDELSYEELLALGDIVGTESRGLSAD----TIASLPSKRYKEGD-NQN 282
Query: 313 QLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
+ C IC+ +YE D++L L C+H +H +CI WL + CPVC EV
Sbjct: 283 GTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEV 332
>AT4G00070.1 | Symbols: | RING/U-box superfamily protein |
chr4:29672-31426 REVERSE LENGTH=179
Length = 179
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 9/104 (8%)
Query: 251 GGRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTS 310
G R+++ D +++ R+D D+M+YEQLL+L +GY N+GVK ++ +R K S
Sbjct: 82 GLRMDT-DPYQELRMDTDHMTYEQLLQLCNNMGYENSGVKASNIDRCLRNTK------PS 134
Query: 311 KHQ--LDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLK 352
+ Q D+ C ICQ+ ++ +GKL C H FH C+K W++ K
Sbjct: 135 EFQSLADKICCICQDGFQKRAGVGKLNCGHNFHVNCVKPWILTK 178
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 21/121 (17%)
Query: 256 SHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTGVKEDEME-LNIRKL------------- 301
SH+ D D +NM+YE+L ELG+ +G V G+ ++ + L K
Sbjct: 165 SHNPTDDENNDPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMK 224
Query: 302 KLFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQE 361
K F+++D+ +C+IC EY D++ L C+H +H CI QWL C +CK E
Sbjct: 225 KKFVADDS-------QCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAE 277
Query: 362 V 362
V
Sbjct: 278 V 278
>AT3G47180.1 | Symbols: | RING/U-box superfamily protein |
chr3:17372821-17373453 REVERSE LENGTH=210
Length = 210
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 268 DNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYES 327
D +SYE+L+ LG+ IG N G+ E+ + S++ K+++DR C +CQ E+E
Sbjct: 115 DQLSYEELIALGDFIGVENRGLTPIEISTCLNASTYVFSHN--KNEIDR-CVVCQMEFEE 171
Query: 328 DDELGKLK-CEHCFHFQCIKQWLVLKNFCPVCKQEVVV 364
+ L L+ C+H +H +CI +WL K CP+C E V
Sbjct: 172 RESLVVLRPCDHPYHSECITKWLETKKICPICCSEPSV 209
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 232 PHPSADHLAEIVK---IQGRLMGGRLNSHDQFRDWRLDIDNMSYEQLLELGEKIGYVNTG 288
P AD + ++ + + +LM +NSH W+L I ++SYE+ ++ ++ G
Sbjct: 97 PSSMADFVEQLFRGRLVDEQLMSTMINSHH----WQLRISDVSYEEREDVYGELE--ARG 150
Query: 289 VKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKL-KCEHCFHFQCIKQ 347
+ D ++RKL +I + + CTIC ++ ++ + L KC+H FH C+ +
Sbjct: 151 LSGD----SLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDK 206
Query: 348 WLVLKNFCPVCKQEV 362
WL+ CP+C+Q V
Sbjct: 207 WLIRHGSCPICRQAV 221
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 275 LLELGEKIGYVNTGVKEDEME-LNIRKLKLF-ISNDTSKHQLDRKCTICQEEYESDDELG 332
L +G G +D++ L K KL ++D+S+ D +C IC +Y+ +E+
Sbjct: 244 FLGYNMNVGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVR 303
Query: 333 KLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
KL C H FH +C+ QWL + + CP+CKQ++
Sbjct: 304 KLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 275 LLELGEKIGYVNTGVKEDEME-LNIRKLKLF-ISNDTSKHQLDRKCTICQEEYESDDELG 332
L +G G +D++ L K KL ++D+S+ D +C IC +Y+ +E+
Sbjct: 244 FLGYNMNVGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVR 303
Query: 333 KLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
KL C H FH +C+ QWL + + CP+CKQ++
Sbjct: 304 KLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 223 PARFYRHNIPHPSADHLAEIVKIQGRLMGGRLNSHDQFRDWRLDIDNMSYEQLLEL---G 279
P R Y P+ L I+ + +NSHD F S EQL+E
Sbjct: 138 PRRTYVILRPNNPTSPLGNIIAPPNQAPPRHVNSHDYF------TGASSLEQLIEQLTQD 191
Query: 280 EKIGYVNTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHC 339
++ G +++ ++ND S+ CT+C EE+ + +L C+H
Sbjct: 192 DRPGPPPASEPTINSLPSVKITPQHLTNDMSQ------CTVCMEEFIVGGDATELPCKHI 245
Query: 340 FHFQCIKQWLVLKNFCPVCKQEVVV 364
+H CI WL L N CP+C++++ +
Sbjct: 246 YHKDCIVPWLRLNNSCPICRRDLPL 270
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
D C +C++E+E E ++ C H +H CI WLV N CPVC+QE+
Sbjct: 187 DSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
D C +C++E+E E ++ C H +H CI WLV N CPVC+QE+
Sbjct: 187 DSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
D C +C++E+E E ++ C H +H CI WLV N CPVC+QE+
Sbjct: 187 DSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 298 IRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLV-LKNFCP 356
+ L F D++ H+ C IC E+Y + L L C+H FH CI WL CP
Sbjct: 212 VHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCP 271
Query: 357 VCKQEV 362
VCK ++
Sbjct: 272 VCKHDI 277
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 298 IRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLV-LKNFCP 356
+ L F D++ H+ C IC E+Y + L L C+H FH CI WL CP
Sbjct: 212 VHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCP 271
Query: 357 VCKQEV 362
VCK ++
Sbjct: 272 VCKHDI 277
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 264 RLDIDNMSYEQLLELGEKIGYVNTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQE 323
R + D++ Y E + + V G + I ++ I D + ++ C IC+E
Sbjct: 86 RFNHDDLVYNTDEEFADVMPSVQIG-PPPASQSAIEAVRTVIITDEDLVK-EKVCAICKE 143
Query: 324 EYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
E+E +E +LKC H +H CI WL + N CP+C+ EV
Sbjct: 144 EFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEV 182
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 314 LDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
LD C +CQ+++E + K+ C+H +H +CI WLV +N CPVC++E+
Sbjct: 117 LDPYCPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCRKEL 165
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 309 TSKH--QLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
T KH D C +C++E+E E ++ C H +H CI WLV N CPVC++E+
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 309 TSKH--QLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
T KH D C +C++E+E E ++ C H +H CI WLV N CPVC++E+
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 309 TSKH--QLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
T KH D C +C++E+E E ++ C H +H CI WLV N CPVC++E+
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
D C IC +Y +++EL +L C H FH +C+ +WL + CP+CK EV
Sbjct: 360 DAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEV 407
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
D C IC Y D+++ +L C H FH C+ +WL + CP+CK EV
Sbjct: 352 DASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 399
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 315 DRKCTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVLKNFCPVCKQE 361
D C IC EY S++ + L +CEHCFH +CI WL L N CPVC+
Sbjct: 261 DTLCPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCRNS 308
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
D +C IC +Y+ +E+ KL C H FH +C+ QWL + + CP+CKQ++
Sbjct: 294 DPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
D +C IC +Y+ +E+ KL C H FH +C+ QWL + + CP+CKQ++
Sbjct: 294 DPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 311 KHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNF-CPVCKQEVVV 364
K Q D +C++C +++ D E+ KLKC H FH C+++W+ N CP+C+ +VV
Sbjct: 96 KKQADNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRTPLVV 150
>AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 311 KHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNF-CPVCKQEVVV 364
K Q D +C++C +++ D E+ KLKC H FH C+++W+ N CP+C+ +VV
Sbjct: 96 KKQADNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRTPLVV 150
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 317 KCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
C +C E +E++ E ++ C+H FH CI WL ++N CPVC+ E+
Sbjct: 198 NCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 243
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 305 ISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
++ D K +++ +C +C +E+E ++ ++ C+H FH C+ WL L N CPVC+ E+
Sbjct: 204 VTKDMLKSEMN-QCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 315 DRKCTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVLKNFCPVCKQE 361
D C IC EYE + L + +C+HCFH CI +WL L CPVC+
Sbjct: 327 DATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCRNS 374
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 317 KCTICQEEYESDDELGKLKCEHCFHFQCIKQWLV-LKNFCPVCKQE 361
C IC E+Y D+L L C H FH C+ WL+ + FCPVCK++
Sbjct: 231 SCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWRTFCPVCKRD 276
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 317 KCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVVV 364
+C IC EE++S++ + ++ C+H FH CI++WL CPVC+ E+ V
Sbjct: 112 ECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPV 159
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 318 CTICQEEYESDDELGKLKCEHCFHFQCIKQWLVL-KNFCPVCKQEV 362
C IC E YE D+L L C H FH C+ WL K+FCPVCK++
Sbjct: 234 CCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDA 279
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 313 QLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
+ + C +C E +E+ E ++ C+H FH CI WL ++N CPVC+ E+
Sbjct: 210 KAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFEL 259
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 298 IRKLKLFISNDTSKHQLDR---KCTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVLKN 353
+ F+ +D +L + +C IC E+E D+ L L KC+H FH CI WL
Sbjct: 105 VETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHV 164
Query: 354 FCPVCKQEVV 363
CPVC+ +
Sbjct: 165 TCPVCRANLA 174
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 303 LFISNDTSKHQLDRKCTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVLKNFCPVCKQE 361
L S+D + +C IC E+E + + L KC+H FH +CI +WL ++ CP C+
Sbjct: 92 LVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTS 151
Query: 362 VVVRH 366
+ +H
Sbjct: 152 IFSQH 156
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 282 IGYVNTGVKEDEMELNIRKL-KLFISNDTSKHQLDRKCTICQEEYESDDELGKL-KCEHC 339
+ N G+K+ + R L KL S D+ + +C IC E+ + DEL L +C H
Sbjct: 71 VAAANKGLKKKVL----RSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHG 126
Query: 340 FHFQCIKQWLVLKNFCPVCKQEVVV 364
FH CI WL + CP C+Q +VV
Sbjct: 127 FHVSCIDTWLGSHSSCPSCRQILVV 151
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 288 GVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKL-KCEHCFHFQCIK 346
G+ E +E + +K++L S D C IC EY + + + L +CEHCFH +CI
Sbjct: 298 GLDESTIE-SYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECID 356
Query: 347 QWLVLKNFCPVCKQ 360
WL L + CPVC+
Sbjct: 357 AWLKLHSSCPVCRS 370
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 298 IRKLKLFISN------------DTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCI 345
+R L L+ N + S + D++C++C E++E + + C+H FH +CI
Sbjct: 140 LRSLSLYYRNKNPGSESSRNTQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECI 199
Query: 346 KQWLVLKNFCPVCK 359
WL K CPVC+
Sbjct: 200 VPWLKTKGQCPVCR 213
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
D C IC YE EL L C H FH CI +WL ++ CP+CK ++
Sbjct: 304 DADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNIL 352
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 317 KCTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVLKNFCPVCKQEVVV 364
+C++C E+E D+ L L KC H FH CI WL+ CP+C+ V++
Sbjct: 134 ECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLL 182
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 309 TSKHQLDRK---CTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
T++ ++R C IC+EE +++ L +L C H +H +CI WL +N CP+C+ V
Sbjct: 85 TAEEMMERGLVVCAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCRHNV 141
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 313 QLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
Q D +C IC YE EL +L C H FH C+ +WL + CP+CK ++
Sbjct: 348 QEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNIL 398
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 298 IRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVLKNFCP 356
+ K+ +F+ + + +C++C E+E DDE L KC H FH CI W ++ CP
Sbjct: 93 LEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCP 152
Query: 357 VCKQEV 362
+C+ V
Sbjct: 153 LCRAPV 158
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 282 IGYVNTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKL-KCEHCF 340
+ N G+K+ ++ KL S ++ + + +C IC E+ + DEL L +C H F
Sbjct: 78 VAAANKGLKKKVLQ---SLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGF 134
Query: 341 HFQCIKQWLVLKNFCPVCKQEVVV 364
H CI WL + CP C+Q +VV
Sbjct: 135 HVACIDTWLGSHSSCPSCRQILVV 158
>AT5G07225.1 | Symbols: | RING/U-box superfamily protein |
chr5:2268642-2270227 REVERSE LENGTH=234
Length = 234
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 286 NTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCI 345
NT V E E I +L + + D+ C IC +Y D+L L C H +H CI
Sbjct: 159 NTSVGEGLTEGQISQLPTIKFKPSLE---DKMCMICHSDYVRGDKLTILPCTHKYHKDCI 215
Query: 346 KQWLVLKNFCPVCKQEVVV 364
WL C VC++EV+V
Sbjct: 216 SHWLQNSKLCCVCQREVIV 234
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 306 SNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCK 359
+ + S + D++C++C E++E + + C+H FH +CI WL K CPVC+
Sbjct: 132 TQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCR 185
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 317 KCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
+C+IC ++++ E ++ C+H FH +CI WL L + CPVC+ E+
Sbjct: 240 QCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 317 KCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
+C+IC ++++ E ++ C+H FH +CI WL L + CPVC+ E+
Sbjct: 240 QCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 313 QLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
Q D +C IC YE EL +L C H FH C+ +WL + CP+CK ++
Sbjct: 277 QEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNIL 327
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
D +C IC YE + EL +L C H FH C+ +WL + CP+CK ++
Sbjct: 322 DAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNIL 370
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 318 CTICQEEYESDDELGKLKCEHCFHFQCIKQWLV-LKNFCPVCKQEV 362
C IC E+Y D+L L C H FH C+ WL + FCPVCK++
Sbjct: 232 CAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDA 277
>AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B |
chr2:100703-101146 FORWARD LENGTH=147
Length = 147
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 286 NTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCI 345
N V D++ LN +LF + D C +C + ++ +E+ KL C H FH QC+
Sbjct: 48 NLSVLADQLNLN----RLFSYRYSDNAASD--CIVCLSKLKTGEEVRKLDCRHVFHKQCL 101
Query: 346 KQWLVLKNF-CPVCKQEVVVRH 366
+ WL NF CP+C+ ++ H
Sbjct: 102 EGWLQHLNFNCPLCRSPLLPHH 123
>AT4G23450.1 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12241837 REVERSE LENGTH=153
Length = 153
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 317 KCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVVV 364
+C IC EEYE D+ KC H FH CI W+ CPVC +E+V+
Sbjct: 103 ECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVL 150
>AT4G23450.3 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12242190 REVERSE LENGTH=208
Length = 208
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 317 KCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVVV 364
+C IC EEYE D+ KC H FH CI W+ CPVC +E+V+
Sbjct: 158 ECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVL 205
>AT4G23450.2 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12242190 REVERSE LENGTH=208
Length = 208
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 317 KCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVVV 364
+C IC EEYE D+ KC H FH CI W+ CPVC +E+V+
Sbjct: 158 ECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVL 205
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
D +C IC EYE EL +L C H FH CI +WL + + CP+CK ++
Sbjct: 335 DAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNIL 383
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 311 KHQLDRKCTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVLKNFCPVCK 359
+H L C +C E+ ++DEL L KC H FH +CI WL+ + CP+C+
Sbjct: 116 RHDL-SDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCR 164
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 318 CTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
C IC++E +++ +L C+H +H +CI WL ++N CPVC+ E+
Sbjct: 291 CAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHEL 335
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 317 KCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
+C++C +++E E ++ C+H FH +CI WL L + CPVC+ E+
Sbjct: 258 QCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFEL 303
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 308 DTSKHQLDRKCTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVLKNFCPVCKQEVVVR 365
DT ++ +C++C + DEL +L +C+H FH CI+ WL CP+C+ +V V+
Sbjct: 132 DTHSKEIGNECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDVSVK 190
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 303 LFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
+F K + +C IC+E D++ +L C+H FH C+K WL N CP+C+ E+
Sbjct: 215 IFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL 274
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 312 HQLDRK---CTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
+LD+ C +C++E ++++ +L C H +H +CI WL ++N CPVC+ E+
Sbjct: 326 EELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYEL 379
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 315 DRKCTICQEEY-ESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
+ C IC E+Y E + KL C+H FH CI +WL L + CP+C+ +
Sbjct: 180 ENGCAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSI 228
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 310 SKHQLDRKCTICQEEYESDDELGK--LKCEHCFHFQCIKQWLVLKNFCPVCK 359
S+HQ C+IC +++E + E+G+ +C H FH CI +WL+ + CP+C+
Sbjct: 163 SEHQTKSSCSICLQDWE-EGEVGRKLARCGHTFHMNCIDEWLLRQETCPICR 213
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
D C IC YE EL L C H FH CI +WL + CP+CK ++
Sbjct: 289 DADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNIL 337
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 285 VNTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKL-KCEHCFHFQ 343
V TG+ E +E + +K +L S + D C IC EY S + + + +C+HCFH +
Sbjct: 288 VTTGLDESIIE-SYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFHSE 346
Query: 344 CIKQWLVLKNFCPVCK 359
CI WL + CP+C+
Sbjct: 347 CIDVWLKIHGSCPLCR 362
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
D C IC+EE S KL C H FH C++ WL +N CP C+ VV
Sbjct: 218 DATCIICREEMTSAK---KLVCGHLFHVHCLRSWLERQNTCPTCRALVV 263
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 318 CTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
CTIC E+ +++ ++ C HCFH CI WL+ K+ CP+C+ E+
Sbjct: 70 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEI 115
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 279 GEKIGYVNTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKLK-CE 337
G + + G+ ++ +R++ + S +D +C++C +Y+ +D+L ++ C+
Sbjct: 66 GNSLSTIELGLSKE-----LREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCK 120
Query: 338 HCFHFQCIKQWLVLKNFCPVCKQEVV 363
H FH CI WL CP+C+ ++
Sbjct: 121 HTFHMDCIDLWLTSHTTCPLCRLALI 146
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 318 CTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVLKNFCPVCK 359
C IC EY S + + + +C+HCFH QCI +WL + + CPVC+
Sbjct: 253 CPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 318 CTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
C +C+EE E+ +L C H +H +CI WL ++N CPVC+ E+
Sbjct: 372 CAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFEL 416
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
D C IC+EE S KL C H FH C++ WL +N CP C+ VV
Sbjct: 289 DATCIICREEMTSAK---KLVCGHLFHVHCLRSWLERQNTCPTCRALVV 334
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 298 IRKLKLFISNDTSKHQLDRK-----CTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVL 351
I+K+ F KHQ K C+IC E+ D+ L L KC H FH CI +WL
Sbjct: 133 IKKIGFF---KLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKS 189
Query: 352 KNFCPVCKQEVVV 364
+ CP+C+ +++V
Sbjct: 190 HSNCPLCRAKIIV 202
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
D C IC+EE S KL C H FH C++ WL +N CP C+ VV
Sbjct: 110 DATCIICREEMTSAK---KLVCGHLFHVHCLRSWLERQNTCPTCRALVV 155
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 317 KCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
+C IC EE+ D +L C+H +H +C+++WL + CP C+ ++
Sbjct: 480 ECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKL 525
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 283 GYVNTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKLKCEHCFHF 342
G N V D++ LN +LF C +C + + +E+ KL+C H FH
Sbjct: 55 GLANIIVLADQLSLN----RLFSYRCGDGGGGGSDCVVCLSKLKEGEEVRKLECRHVFHK 110
Query: 343 QCIKQWLVLKNF-CPVCKQEVV 363
+C++ WL NF CP+C+ +V
Sbjct: 111 KCLEGWLHQFNFTCPLCRSALV 132
>AT5G41350.1 | Symbols: | RING/U-box superfamily protein |
chr5:16542026-16543092 REVERSE LENGTH=212
Length = 212
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 315 DRKCTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
+ C IC EEY+ ++ KC+H FH CI +W+ CPVC +E+V
Sbjct: 158 EEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVCNKEMV 206
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 286 NTGVKEDEMELNIRKLKLFISNDTSKHQLDRKCTICQEEYESDDELGKL-KCEHCFHFQC 344
N+G+ +E L +F S H+ +C +C +E + L L KC+H FH +C
Sbjct: 64 NSGIDRSVIE----SLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVEC 119
Query: 345 IKQWLVLKNFCPVCKQEV 362
+ WL + CP+C+ V
Sbjct: 120 VDTWLDAHSTCPLCRYRV 137
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 318 CTICQEEYESDDELGKL-KCEHCFHFQCIKQWLVLKNFCPVCKQEVV 363
C +C E+E++D+L L KC H FH +CI WL+ + CP+C+ ++
Sbjct: 126 CPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLL 172
>AT5G01980.1 | Symbols: | RING/U-box superfamily protein |
chr5:375542-377023 FORWARD LENGTH=493
Length = 493
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 318 CTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
C IC+E + +E +L C H +H CI WL +N CP+C+ E+
Sbjct: 350 CAICKELFSLRNETTQLPCLHLYHAHCIVPWLSARNSCPLCRYEL 394
>AT1G51930.1 | Symbols: | RING/U-box superfamily protein |
chr1:19294838-19295236 REVERSE LENGTH=132
Length = 132
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 318 CTICQEEYESDDELGKLK-CEHCFHFQCIKQWLVLKNFCPVCKQEV 362
C IC EEYE D ++ +L+ C H FH CI WL K CP C++ V
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCRRSV 125
>AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A |
chr2:16567506-16568711 REVERSE LENGTH=401
Length = 401
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 318 CTICQEEYESDDELGKLKCEHCFHFQCIKQWLVLKNFCPVCKQEV 362
C +C+E + ++ C H +H CI WL ++N CPVC+ E+
Sbjct: 201 CAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHEL 245