Miyakogusa Predicted Gene

Lj2g3v0694630.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0694630.1 tr|D7L8F8|D7L8F8_ARALL Octicosapeptide/Phox/Bem1p
domain-containing protein OS=Arabidopsis lyrata
su,31.91,6e-16,seg,NULL; coiled-coil,NULL,CUFF.35227.1
         (404 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01190.1 | Symbols:  | Octicosapeptide/Phox/Bem1p family prot...    58   1e-08

>AT2G01190.1 | Symbols:  | Octicosapeptide/Phox/Bem1p family protein
           | chr2:115023-117296 FORWARD LENGTH=720
          Length = 720

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 2   VRVDDNGGTSRL--QQEKRIEEQFAQMTFGASGVKPDDGFV-VSSAMAMPTMTPSNVTIV 58
           V V++ GG   L  Q+   IEEQFA+   G      DDGF  +SS   MP         V
Sbjct: 308 VHVEEPGGVRTLPDQRNLGIEEQFARFNVGNKHQLHDDGFAAISSPPPMPVTIALPAAPV 367

Query: 59  SAGVVPTSEYMNRVVSDDERSDHGAPVGSRK 89
           +A  V ++E+  RV SDDERSDHG   G RK
Sbjct: 368 TAATV-SNEFQARVYSDDERSDHGVQAGYRK 397