Miyakogusa Predicted Gene

Lj2g3v0690380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0690380.1 tr|Q01D14|Q01D14_OSTTA WGS project CAID00000000
data, contig chromosome 03 OS=Ostreococcus tauri GN=,32.34,2e-17,
,NODE_19177_length_1243_cov_66.435234.path1.1
         (264 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18060.1 | Symbols:  | unknown protein; INVOLVED IN: biologic...   294   5e-80

>AT1G18060.1 | Symbols:  | unknown protein; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast;
           EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
           growth stages; Has 74 Blast hits to 74 proteins in 29
           species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi -
           0; Plants - 49; Viruses - 0; Other Eukaryotes - 6
           (source: NCBI BLink). | chr1:6212065-6213314 REVERSE
           LENGTH=226
          Length = 226

 Score =  294 bits (752), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 146/208 (70%), Positives = 167/208 (80%), Gaps = 6/208 (2%)

Query: 56  RQRTTSPRATLDDVQRDQLSSTPLLIEDDNPKKEVEESVQVLKNAAKTRKVAAEEVLSAL 115
           R+R    +AT+D   R+Q+       +D  P K+V ESV VLK AAKTRKVAA+E+L+A 
Sbjct: 22  RERLHLVKATVDG--RNQIVPPA---KDQIPNKQVTESVNVLKTAAKTRKVAADEILAAF 76

Query: 116 SVIEKAKIDPSGFFDILGGKESPGRTWMLIFTAKKQLKGGGYFPLTAVQRFDAAAKRIEN 175
           S IEKAKIDPS F + LGG ESPGRTWMLIFTA+K+L  G YFPLTAVQRFDAA KRIEN
Sbjct: 77  SAIEKAKIDPSTFLETLGGPESPGRTWMLIFTAEKKLTKGRYFPLTAVQRFDAAGKRIEN 136

Query: 176 GVYLGPIGQLTFEGRLSWKNRILAFIFENLRIKIGPLKPLQISLGKKEDT-EPNTKSPFF 234
           GVYLGP G LTFEGR SWKNRILAF+FE +RIKIGPL PL+ SLGKK+   EP+ K PFF
Sbjct: 137 GVYLGPFGALTFEGRFSWKNRILAFVFEQIRIKIGPLDPLEFSLGKKDAVEEPSNKDPFF 196

Query: 235 IWFYVDEEIAVARGRSGGTAFWCRCRQV 262
           IWFY+DEEIAVARGRSGGTAFWCRCR++
Sbjct: 197 IWFYIDEEIAVARGRSGGTAFWCRCRRI 224