Miyakogusa Predicted Gene
- Lj2g3v0690060.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0690060.1 tr|G7LDB1|G7LDB1_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_8g1,86.85,0,TPR-like,NULL; no
description,Tetratricopeptide-like helical; PPR,Pentatricopeptide
repeat; PPR: pen,gene.g39768.t1.1
(707 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 1088 0.0
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 654 0.0
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 625 e-179
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 544 e-155
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 535 e-152
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 527 e-150
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 525 e-149
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 513 e-145
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 500 e-141
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 496 e-140
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 494 e-140
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 490 e-138
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 487 e-137
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 486 e-137
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 484 e-136
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 480 e-135
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 475 e-134
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 475 e-134
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 473 e-133
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 469 e-132
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 467 e-131
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 466 e-131
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 463 e-130
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 462 e-130
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 461 e-129
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 460 e-129
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 460 e-129
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 448 e-126
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 447 e-125
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 447 e-125
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 444 e-125
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 441 e-124
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 440 e-123
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 440 e-123
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 438 e-123
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 436 e-122
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 436 e-122
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 435 e-122
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-122
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-122
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-121
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 432 e-121
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 431 e-120
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 429 e-120
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 429 e-120
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 428 e-120
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 426 e-119
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-119
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 423 e-118
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 422 e-118
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 421 e-118
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 421 e-117
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 418 e-117
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-116
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 415 e-116
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-115
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 413 e-115
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 411 e-115
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 411 e-114
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 408 e-114
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 407 e-113
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 406 e-113
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-111
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 398 e-111
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 398 e-111
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 391 e-109
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 390 e-108
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 385 e-107
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 371 e-103
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-103
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 369 e-102
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 366 e-101
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 360 1e-99
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 1e-98
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 1e-98
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 356 3e-98
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 356 3e-98
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 4e-98
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 355 8e-98
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 9e-98
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 353 2e-97
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 1e-96
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 347 2e-95
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 346 3e-95
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 343 3e-94
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 4e-94
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 342 7e-94
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 8e-94
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 335 8e-92
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 9e-92
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 4e-91
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 1e-90
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 3e-90
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 328 6e-90
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 7e-90
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 9e-90
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 9e-90
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 326 4e-89
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 6e-89
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 7e-88
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 6e-87
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 318 9e-87
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 3e-86
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 4e-86
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 310 2e-84
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 4e-83
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 6e-83
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 5e-82
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 6e-82
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 1e-81
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 1e-81
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 2e-81
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 3e-81
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 300 3e-81
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 296 3e-80
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 294 2e-79
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 292 5e-79
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 6e-79
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 2e-78
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 287 1e-77
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 1e-76
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 283 2e-76
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 1e-75
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 3e-75
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 3e-75
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 5e-75
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 8e-75
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 6e-72
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 3e-71
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 5e-71
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 1e-70
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 7e-68
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 3e-66
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 3e-66
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 6e-66
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 6e-66
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 8e-66
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 8e-65
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 9e-65
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 4e-64
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 3e-63
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 6e-60
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 7e-57
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 215 7e-56
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 3e-50
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 5e-50
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 8e-46
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 6e-38
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 155 1e-37
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 3e-35
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 4e-35
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 5e-35
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 9e-35
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 3e-34
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 5e-34
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 7e-34
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 9e-34
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 138 1e-32
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 137 3e-32
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 6e-32
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 7e-32
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 1e-31
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 3e-31
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 5e-31
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 132 7e-31
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 6e-30
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 6e-30
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 128 1e-29
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 2e-29
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 7e-29
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 1e-28
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 1e-28
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 125 1e-28
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 5e-28
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 120 4e-27
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 119 6e-27
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 6e-27
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 7e-27
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-27
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-27
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 4e-26
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 115 1e-25
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 3e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 3e-25
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 110 4e-24
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 107 3e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 105 1e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 2e-22
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 3e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 6e-22
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 9e-22
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 96 7e-20
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 96 1e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 4e-19
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 94 4e-19
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 94 4e-19
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 89 1e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-17
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 86 7e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 9e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 7e-15
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 79 9e-15
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 9e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 73 8e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 73 8e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 73 9e-13
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 64 3e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 5e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 6e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 7e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 3e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 4e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 57 5e-08
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/707 (69%), Positives = 597/707 (84%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
MR G C+ ALRVF MPR SSVSYN MISGYLRN F LAR LFD+MP+RDLVSWNVM+
Sbjct: 75 MRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIK 134
Query: 61 GYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGL 120
GYVRNR LG AR LF+ MP++DV SWN MLSGYAQNG D+AR VF +MP KN +SWN L
Sbjct: 135 GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 121 LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN 180
L+AYV N ++EEAC LF S+ +W L+SWNCL+GGFVK+K + AR+ FD M+VRDVVSWN
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 181 TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS 240
T+I+GYAQ G + +A+ LFD+SP QDVFTWTAMVSGY+QN M++EAR FD+MP++NE+S
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS 314
Query: 241 YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 300
+NAM+AGYVQ +M+MA+ELF+ MP RNVS+WNTMITGY Q G I++A+ LFD MP+RD
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 360
VSWAA+I+GY+Q+GH EAL +F++++R+G LNRS+FS ALSTCAD+ ALELGKQ+HG+
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 361 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 420
+VK GYETGCFVGNALL MY KCGSI EAND+F+ + KD+VSWNTMIAGY+RHGFG+ A
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 421 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 480
L FESMK G+KPD+ TMV VLSACSH GL+D+G +YFY+M +DY V P+S+HY CM+D
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 481 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM 540
LLGRAG LE+A +LM+NMPFEP AA WG LLGASR+HGNTEL E AA+ +F MEP NSGM
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 614
Query: 541 YVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRI 600
YVLLSNLYA+SGRW D G +R RMRD GV+KV GYSW+E+QNK H F+VGD FHPEKD I
Sbjct: 615 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 674
Query: 601 YAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRV 660
+AFLEELDL+M++ GYVS T +VLHDVEEEEKE M++YHSE+LAVA+GI+ + +GRPIRV
Sbjct: 675 FAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRV 734
Query: 661 IKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
IKNLRVCEDCHNAIK++++I GRLIILRD++RFHHF +G CSCGDYW
Sbjct: 735 IKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/696 (44%), Positives = 450/696 (64%), Gaps = 5/696 (0%)
Query: 14 NTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARR 73
T+P ++ N I+ R + AR LFD + + SWN M+ GY N DAR+
Sbjct: 13 TTIPPPTA---NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARK 69
Query: 74 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA 133
LFD MP ++++SWN ++SGY +NG DEAR+VF MP +N +SW L+ YVHNG+++ A
Sbjct: 70 LFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVA 129
Query: 134 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 193
LF + +SW ++ GF++ + A KL++ + +D ++ +MI G ++G +
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVD 189
Query: 194 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNK 253
+A+ +FD+ + V TWT MV+GY QN +D+AR FD MP+K E+S+ +M+ GYVQ+ +
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGR 249
Query: 254 MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 313
++ A ELFE MP + V + N MI+G GQ G+IA+AR++FD M +R+ SW +I + +
Sbjct: 250 IEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERN 309
Query: 314 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 373
G EAL++FI +++ G T LS CA +A+L GKQ+H Q+V+ ++ +V
Sbjct: 310 GFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA 369
Query: 374 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-V 432
+ L+ MY KCG + ++ +F+ KD++ WN++I+GYA HG G++AL VF M G
Sbjct: 370 SVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGST 429
Query: 433 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 492
KP+E+T V LSACS+AG+++ G + + SM + V P + HY CM+D+LGRAGR EA
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAM 489
Query: 493 DLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASG 552
+++ +M EP AA WG+LLGA R H ++ E A+ + ++EP NSG Y+LLSN+YA+ G
Sbjct: 490 EMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQG 549
Query: 553 RWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDC-FHPEKDRIYAFLEELDLKM 611
RWAD +R M+ V+K G SW EV+NK+H FT G HPE++ I L+ELD +
Sbjct: 550 RWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLL 609
Query: 612 RREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCH 671
R GY LHDV+EEEK + LKYHSE+LAVA+ +L + G PIRV+KNLRVC DCH
Sbjct: 610 REAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCH 669
Query: 672 NAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
AIK ISK+ R IILRD++RFHHF G CSC DYW
Sbjct: 670 TAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 240/446 (53%), Gaps = 13/446 (2%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
M+NG D A +VF+ MP R+ VS+ A++ GY+ N + +A LF KMP+++ VSW VML
Sbjct: 90 MKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLI 149
Query: 61 GYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGL 120
G++++ R+ DA +L++ +P KD ++ +M+ G + G DEARE+F +M ++ I+W +
Sbjct: 150 GFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTM 209
Query: 121 LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN 180
+ Y N R+++A ++FD + +SW ++ G+V+ + A +LF+ M V+ V++ N
Sbjct: 210 VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 269
Query: 181 TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK---- 236
MISG Q G++++A+ +FD ++ +W ++ + +NG EA F M ++
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 237 ---NEISYNAMVAGYVQ-SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF 292
IS ++ A + + +L +V + ++T Y + G++ +++ +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 293 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES-LNRSTFSCALSTCADIAAL 351
D P +D + W +IISGYA G EEAL +F E+ G + N TF LS C+ +
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMV 449
Query: 352 ELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIA 409
E G +I+ + G + ++ M + G EA ++ + + E D W +++
Sbjct: 450 EEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLG 509
Query: 410 GYARHGFGKQALMVFESMKTIGVKPD 435
H + + F + K I ++P+
Sbjct: 510 ACRTH--SQLDVAEFCAKKLIEIEPE 533
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 625 bits (1613), Expect = e-179, Method: Compositional matrix adjust.
Identities = 292/681 (42%), Positives = 437/681 (64%), Gaps = 1/681 (0%)
Query: 28 ISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWN 87
IS R + + AR FD + + + SWN +++GY N +AR+LFD M +++VVSWN
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 88 AMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS 147
++SGY +N EAR VF MP +N +SW ++ Y+ G + EA LF + +S
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 148 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 207
W + GG + + ARKL+D M V+DVV+ MI G ++G + +A+ +FD+ ++V
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 208 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR 267
TWT M++GY QN +D AR F+ MP+K E+S+ +M+ GY S +++ A E FE MP +
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK 263
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
V + N MI G+G+ G+I++AR++FD+M RD +W +I Y + G EAL++F +++
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 387
+ G + + LS CA +A+L+ G+Q+H +V+ ++ +V + L+ MY KCG +
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 388 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
+A VF+ KD++ WN++I+GYA HG G++AL +F M + G P+++T++ +L+ACS
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 507
+AG ++ G E F SM + VTP+ +HY+C +D+LGRAG++++A +L+ +M +P A W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 508 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 567
GALLGA + H +L E AA+ +F+ EP N+G YVLLS++ A+ +W D +R MR
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563
Query: 568 GVQKVTGYSWVEVQNKIHKFTVGDCF-HPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 626
V K G SW+EV K+H FT G HPE+ I LE+ D +R GY VLHD
Sbjct: 564 NVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHD 623
Query: 627 VEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLII 686
V+EEEK L HSE+LAVA+G+L +P G PIRV+KNLRVC DCH AIK ISK+ R II
Sbjct: 624 VDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREII 683
Query: 687 LRDSHRFHHFNEGICSCGDYW 707
LRD++RFHHFN G CSC DYW
Sbjct: 684 LRDANRFHHFNNGECSCRDYW 704
Score = 215 bits (548), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 220/458 (48%), Gaps = 51/458 (11%)
Query: 3 NGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGY 62
NG A ++F+ M R+ VS+N ++SGY++N AR++F+ MP+R++VSW M+ GY
Sbjct: 61 NGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGY 120
Query: 63 VRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA 122
++ +G+A LF MP+++ VSW M G +G D+AR+++ MP K+ ++ ++
Sbjct: 121 MQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIG 180
Query: 123 AYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 182
GR++EA +FD + +++W ++ G+ + + ARKLF+ M + VSW +M
Sbjct: 181 GLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSM 240
Query: 183 ISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYN 242
+ GY G + A+ F+ P + V AM+ G+ + G + +AR FD M ++ ++
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWR 300
Query: 243 AMVAGYVQSNKMDMARELFEAMPSRNV-SSWNTMI------------------------- 276
M+ Y + A +LF M + V S+ ++I
Sbjct: 301 GMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360
Query: 277 -------------TGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 323
T Y + G++ +A+ +FD +D + W +IISGYA G EEAL +F
Sbjct: 361 QFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIF 420
Query: 324 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ------VVKTGYETGCFVGNALL 377
E+ G N+ T L+ C+ LE G +I V T C V
Sbjct: 421 HEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTV----- 475
Query: 378 GMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARH 414
M + G + +A ++ E + K D W ++ H
Sbjct: 476 DMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTH 513
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 544 bits (1401), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/592 (45%), Positives = 382/592 (64%), Gaps = 2/592 (0%)
Query: 118 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK-RKMLGAARKLFDKMHVRDV 176
N ++A V +G I+ A R+F I+WN L+ G K + A +LFD++ D
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 177 VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 236
S+N M+S Y ++ + +A++ FD+ P +D +W M++GY + G +++AR F M +K
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 237 NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF-DMM 295
NE+S+NAM++GY++ ++ A F+ P R V +W MITGY + + A +F DM
Sbjct: 185 NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
++ V+W A+ISGY + E+ L +F + +G N S S AL C++++AL+LG+
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 415
QIH V K+ +L+ MY KCG +G+A +FE +++KDVV+WN MI+GYA+HG
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 416 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 475
+AL +F M ++PD IT V VL AC+HAGL++ G YF SM +DY V P HY
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 476 TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEP 535
TCM+DLLGRAG+LEEA L+R+MPF P AA +G LLGA R+H N EL E AAE + ++
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS 484
Query: 536 HNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHP 595
N+ YV L+N+YA+ RW D +R RM++ V KV GYSW+E++NK+H F D HP
Sbjct: 485 QNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHP 544
Query: 596 EKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAG 655
E D I+ L+EL+ KM+ GY + LH+VEEE+KE +L +HSEKLAVAFG + +P G
Sbjct: 545 ELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQG 604
Query: 656 RPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
I+V KNLR+C DCH AIK IS+I R II+RD+ RFHHF +G CSCGDYW
Sbjct: 605 SQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 185/375 (49%), Gaps = 54/375 (14%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRN-ARFSLARDLFDKMPQRDLVSWNVML 59
+R+G D ALRVF+ M ++++++N+++ G ++ +R A LFD++P+ D S+N+ML
Sbjct: 72 VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIML 131
Query: 60 TGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG 119
+ YVRN A+ FD MP KD SWN M++GYA+ G ++ARE+FY M KN +SWN
Sbjct: 132 SCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191
Query: 120 LLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV-RDVVS 178
+++ Y+ G +E+A F +++W ++ G++K K + A +F M V +++V+
Sbjct: 192 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 179 WNTMISGYAQDGDMSQAKNLF------------------------------DQSPHQ--- 205
WN MISGY ++ LF + HQ
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 206 ------DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARE 259
DV T+++S Y + G L +A F+ M +K+ +++NAM++GY Q D A
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 260 LFEAMPSRNV-SSWNTMIT---GYGQNGDIAQARKLFDMM-------PQRDCVSWAAIIS 308
LF M + W T + G + F+ M PQ D + ++
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD--HYTCMVD 429
Query: 309 GYAQTGHYEEALNMF 323
+ G EEAL +
Sbjct: 430 LLGRAGKLEEALKLI 444
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 183/347 (52%), Gaps = 41/347 (11%)
Query: 49 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN-GYADEAREVFY 107
Q + N ++ VR+ + A R+F M K+ ++WN++L G +++ EA ++F
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFD 117
Query: 108 QMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKL 167
++P + S+N +L+ YV N E+A FD + SWN ++ G+ +R + AR+L
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAREL 177
Query: 168 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
F M ++ VSWN MISGY + GD+ +A + F +P + V WTAM++GY++ ++ A
Sbjct: 178 FYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAE 237
Query: 228 TFFDQMP-QKNEISYNAMVAGYVQSNKMDMARELFEAM------PS-------------- 266
F M KN +++NAM++GYV++++ + +LF AM P+
Sbjct: 238 AMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL 297
Query: 267 -------------------RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAII 307
+V++ ++I+ Y + G++ A KLF++M ++D V+W A+I
Sbjct: 298 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMI 357
Query: 308 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 354
SGYAQ G+ ++AL +F E+ + + TF L C + +G
Sbjct: 358 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 535 bits (1378), Expect = e-152, Method: Compositional matrix adjust.
Identities = 290/788 (36%), Positives = 443/788 (56%), Gaps = 91/788 (11%)
Query: 11 RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGD 70
R+ T + N ++ LR + S AR ++D+MP ++ VS N M++G+V+ +
Sbjct: 38 RIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSS 97
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA------ISWNGLLA-- 122
AR LFD+MP + VV+W ++ YA+N + DEA ++F QM ++ +++ LL
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 123 --AYVHN--GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS 178
A N G++ ++ L N L+ + + + L A LF+++ +D V+
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 179 WNTMISGYAQDGDMSQAKNLF---DQSPHQDV-FTWT---------------------AM 213
+NT+I+GY +DG +++ +LF QS HQ FT++ ++
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 214 VSGY-----VQNGMLD---------EARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARE 259
+G+ V N +LD E R FD+MP+ + +SYN +++ Y Q+++ + +
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 260 LFEAMP-----------------SRNVSSW----------------------NTMITGYG 280
F M + N+SS N+++ Y
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397
Query: 281 QNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 340
+ +A +F +PQR VSW A+ISGY Q G + L +F +++ ++STF+
Sbjct: 398 KCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFAT 457
Query: 341 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKD 400
L A A+L LGKQ+H ++++G F G+ L+ MY KCGSI +A VFE + +++
Sbjct: 458 VLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 517
Query: 401 VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFY 460
VSWN +I+ +A +G G+ A+ F M G++PD ++++GVL+ACSH G +++GTEYF
Sbjct: 518 AVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQ 577
Query: 461 SMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 520
+M+ Y +TP KHY CM+DLLGR GR EA+ LM MPFEP W ++L A RIH N
Sbjct: 578 AMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQ 637
Query: 521 ELGEKAAEMVFKMEP-HNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 579
L E+AAE +F ME ++ YV +SN+YAA+G W +++ MR+ G++KV YSWVE
Sbjct: 638 SLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVE 697
Query: 580 VQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYH 639
V +KIH F+ D HP D I + EL ++ REGY T V+ DV+E+ K LKYH
Sbjct: 698 VNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYH 757
Query: 640 SEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEG 699
SE+LAVAF +++ P G PI V+KNLR C DCH AIK ISKIV R I +RD+ RFHHF+EG
Sbjct: 758 SERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEG 817
Query: 700 ICSCGDYW 707
+CSCGDYW
Sbjct: 818 VCSCGDYW 825
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 200/406 (49%), Gaps = 22/406 (5%)
Query: 122 AAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 181
A ++ R++ R+ + D + N ++ ++R + AARK++D+M ++ VS NT
Sbjct: 27 ATFLDTRRVD--ARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----- 236
MISG+ + GD+S A++LFD P + V TWT ++ Y +N DEA F QM +
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 237 -NEISYNAMVAG---YVQSNKMDMAREL-----FEAMPSRNVSSWNTMITGYGQNGDIAQ 287
+ +++ ++ G V N + F+ P VS N ++ Y + +
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS--NVLLKSYCEVRRLDL 202
Query: 288 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 347
A LF+ +P++D V++ +I+GY + G Y E++++F+++++ G + TFS L
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 348 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 407
+ LG+Q+H V TG+ VGN +L Y K + E +F+ + E D VS+N +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 408 IAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 467
I+ Y++ + +L F M+ +G +LS ++ + G + +
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ--LHCQALLA 380
Query: 468 VTPSSKHY-TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
S H ++D+ + EEA+ + +++P + SW AL+
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALIS 425
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 527 bits (1358), Expect = e-150, Method: Compositional matrix adjust.
Identities = 290/755 (38%), Positives = 426/755 (56%), Gaps = 57/755 (7%)
Query: 5 HCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR 64
HC RV + S N +++ Y + AR LFD+MP R SWN +L+ Y +
Sbjct: 37 HC----RVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 65 NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGL 120
+ FD +PQ+D VSW M+ GY G +A V M + + +
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 121 LAAYVHNGRIEEACRLFDSKSDWEL-----ISWNCLMGGFVKRKMLGAARKLFDKMHVRD 175
LA+ +E ++ L +S N L+ + K A+ +FD+M VRD
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVS-NSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 176 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
+ SWN MI+ + Q G M A F+Q +D+ TW +M+SG+ Q G A F +M +
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 236 KNEIS----------------------------------------YNAMVAGYVQSNKMD 255
+ +S NA+++ Y + ++
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 256 MARELFEAMPSRN--VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 313
AR L E +++ + + ++ GY + GD+ QA+ +F + RD V+W A+I GY Q
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 314 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 373
G Y EA+N+F + G+ N T + LS + +A+L GKQIHG VK+G V
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 374 NALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 432
NAL+ MY K G+I A+ F+ I E+D VSW +MI A+HG ++AL +FE+M G+
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 433 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 492
+PD IT VGV SAC+HAGL+++G +YF M + P+ HY CM+DL GRAG L+EAQ
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 493 DLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASG 552
+ + MP EP +WG+LL A R+H N +LG+ AAE + +EP NSG Y L+NLY+A G
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 553 RWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR 612
+W +A +R M+D V+K G+SW+EV++K+H F V D HPEK+ IY ++++ +++
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Query: 613 REGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHN 672
+ GYV T VLHD+EEE KE +L++HSEKLA+AFG+++ P +R++KNLRVC DCH
Sbjct: 692 KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHT 751
Query: 673 AIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
AIK ISK+VGR II+RD+ RFHHF +G CSC DYW
Sbjct: 752 AIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 179/435 (41%), Gaps = 98/435 (22%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVS------ 54
M+ G D A+ F M R V++N+MISG+ + A D+F KM + L+S
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTL 282
Query: 55 ----------------------------------WNVMLTGYVRNRRLGDARRLFDSMPQ 80
N +++ Y R + ARRL +
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342
Query: 81 KD--VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD 138
KD + + A+L GY + G ++A+ +F + ++ ++W ++ Y +G EA LF
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 139 S-------KSDWELISW--------------------------------NCLMGGFVKRK 159
S + + L + N L+ + K
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 160 MLGAARKLFDKMHV-RDVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMV 214
+ +A + FD + RD VSW +MI AQ G +A LF+ + D T+ +
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 215 SGYVQNGMLDEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMP-SRN 268
S G++++ R +FD M ++I Y MV + ++ + A+E E MP +
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 269 VSSWNTMITG--YGQNGDIAQ--ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 324
V +W ++++ +N D+ + A +L + P+ + +++A+ + Y+ G +EEA +
Sbjct: 583 VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPE-NSGAYSALANLYSACGKWEEAAKIRK 641
Query: 325 EIKRDGESLNRSTFS 339
+K DG FS
Sbjct: 642 SMK-DGRVKKEQGFS 655
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 525 bits (1353), Expect = e-149, Method: Compositional matrix adjust.
Identities = 280/751 (37%), Positives = 432/751 (57%), Gaps = 57/751 (7%)
Query: 12 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 71
F PR + N +I Y +++ + AR LFD++ + D ++ M++GY + + A
Sbjct: 42 TFGFQPRAHIL--NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLA 99
Query: 72 RRLFDSMP--QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYV 125
R +F+ P +D V +NAM++G++ N A +F +M H+ + ++ +LA
Sbjct: 100 RGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA 159
Query: 126 HNGRIEEACRLFDS---KSDWELISW--NCLMGGFVK----RKMLGAARKLFDKMHVRDV 176
E+ C F + KS I+ N L+ + K +L +ARK+FD++ +D
Sbjct: 160 LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDE 219
Query: 177 VSWNTMISGYAQDGDMSQAKNLFD-QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP- 234
SW TM++GY ++G + L + + + + AM+SGYV G EA +M
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279
Query: 235 ---QKNEISY----------------------------------NAMVAGYVQSNKMDMA 257
+ +E +Y N++V+ Y + K D A
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEA 339
Query: 258 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 317
R +FE MP++++ SWN +++GY +G I +A+ +F M +++ +SW +ISG A+ G E
Sbjct: 340 RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGE 399
Query: 318 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 377
E L +F +KR+G FS A+ +CA + A G+Q H Q++K G+++ GNAL+
Sbjct: 400 EGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALI 459
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
MY KCG + EA VF + D VSWN +IA +HG G +A+ V+E M G++PD I
Sbjct: 460 TMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
T++ VL+ACSHAGL+D+G +YF SM Y + P + HY +IDLL R+G+ +A+ ++ +
Sbjct: 520 TLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIES 579
Query: 498 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADA 557
+PF+P A W ALL R+HGN ELG AA+ +F + P + G Y+LLSN++AA+G+W +
Sbjct: 580 LPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEV 639
Query: 558 GNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYV 617
+R MRD GV+K SW+E++ ++H F V D HPE + +Y +L++L +MRR GYV
Sbjct: 640 ARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYV 699
Query: 618 SSTKLVLHDVEEE-EKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKH 676
T VLHDVE + KE ML HSEK+AVAFG++ +P G IR+ KNLR C DCHN +
Sbjct: 700 PDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRF 759
Query: 677 ISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+S +V R IILRD RFHHF G CSCG++W
Sbjct: 760 LSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 103/273 (37%), Gaps = 70/273 (25%)
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----------- 398
+L+L + +HG ++ G++ + N L+ +Y K + A +F+ I E
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 399 ----------------------KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDE 436
+D V +N MI G++ + G A+ +F MK G KPD
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 437 ITMVGVLSACS------------HAGLIDRGTEYFYSMNKD----YSVTPSSKHYTCMID 480
T VL+ + HA + G Y S++ YS SS
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL----- 203
Query: 481 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV---FKMEPHN 537
L A+ + + E SW ++ +G +LGE+ E + K+ +N
Sbjct: 204 -------LHSARKVFDEI-LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 538 SGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
+ + + Y G + +A M RM G++
Sbjct: 256 A-----MISGYVNRGFYQEALEMVRRMVSSGIE 283
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 513 bits (1322), Expect = e-145, Method: Compositional matrix adjust.
Identities = 263/648 (40%), Positives = 382/648 (58%), Gaps = 42/648 (6%)
Query: 100 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRK 159
DEAREVF Q+P + + ++ Y + R+ +A LFD +++SWN ++ G V+
Sbjct: 52 DEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECG 111
Query: 160 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 219
+ A KLFD+M R VVSW M++G + G + QA+ LF Q P +D W +MV GY+Q
Sbjct: 112 DMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 220 NGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN------ 273
G +D+A F QMP KN IS+ M+ G Q+ + A +LF+ M + S +
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 274 ---------------------------------TMITGYGQNGDIAQARKLFDMMPQRDC 300
++IT Y I +RK+FD
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 360
W A++SGY+ +E+AL++F + R+ N+STF+ L++C+ + L+ GK++HG
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 361 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 420
VK G ET FVGN+L+ MY G++ +A VF I +K +VSWN++I G A+HG GK A
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 421 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS-VTPSSKHYTCMI 479
++F M + +PDEIT G+LSACSH G +++G + FY M+ + + +HYTCM+
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMV 471
Query: 480 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 539
D+LGR G+L+EA++L+ M +P W ALL A R+H + + GEKAA +F ++ +S
Sbjct: 472 DILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSA 531
Query: 540 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDR 599
YVLLSN+YA++GRW++ +R +M+ G+ K G SWV ++ K H+F GD P R
Sbjct: 532 AYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSR 589
Query: 600 IYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIR 659
IY LE L K++ GY + LHDVE+E+KE ML YHSE+LA+AFG++ G +
Sbjct: 590 IYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVT 649
Query: 660 VIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
V+KNLRVCEDCH IK IS +VGR I+LRD RFHHF G CSCGDYW
Sbjct: 650 VMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 160/613 (26%), Positives = 269/613 (43%), Gaps = 99/613 (16%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNR 66
D A VFN +P Y MI+GY R+ R A +LFD+MP RD+VSWN M++G V
Sbjct: 52 DEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECG 111
Query: 67 RLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVH 126
+ A +LFD MP++ VVSW AM++G ++G D+A +FYQMP K+ +WN ++ Y+
Sbjct: 112 DMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 127 NGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN------ 180
G++++A +LF +ISW ++ G + + G A LF M + S +
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 181 ---------------------------------TMISGYAQDGDMSQAKNLFDQSPHQDV 207
++I+ YA + ++ +FD+ H+ V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 208 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS----NKMDMARELFEA 263
WTA++SGY N ++A + F M + + + + A + S +D +E+
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 264 MPSRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
+ + N+++ Y +G++ A +F + ++ VSW +II G AQ G + A
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 320 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 379
+F ++ R + + TF+ LS C+ LE G+++
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL---------------------F 450
Query: 380 YFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 439
Y+ I ++ + + M+ R G K+A + E M VKP+E+
Sbjct: 451 YYMSSGINHI--------DRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMVW 499
Query: 440 VGVLSACSHAGLIDRGTEYFYSM-NKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL---- 494
+ +LSAC +DRG + ++ N D + SS Y + ++ AGR L
Sbjct: 500 LALLSACRMHSDVDRGEKAAAAIFNLD---SKSSAAYVLLSNIYASAGRWSNVSKLRVKM 556
Query: 495 MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRW 554
+N + P +SW + G K E +PH S +Y L L
Sbjct: 557 KKNGIMKKPGSSWVVIRG------------KKHEFFSGDQPHCSRIYEKLEFLREKLKEL 604
Query: 555 ADAGNMRSRMRDV 567
A + RS + DV
Sbjct: 605 GYAPDYRSALHDV 617
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 167/370 (45%), Gaps = 64/370 (17%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
R+G D A R+F MP + + ++N+M+ GYL+ + A LF +MP ++++SW M+
Sbjct: 139 FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMIC 198
Query: 61 GYVRNRRLGDARRLFDSM----------PQKDVVSWNA---------------------- 88
G +N R G+A LF +M P V++ A
Sbjct: 199 GLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLY 258
Query: 89 -------MLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD--- 138
+++ YA ++R+VF + H+ W LL+ Y N + E+A +F
Sbjct: 259 EEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGML 318
Query: 139 ------SKSDWELISWNCLMGGFVK--RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDG 190
++S + +C G + ++M G A KL + D N+++ Y+ G
Sbjct: 319 RNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLET---DAFVGNSLVVMYSDSG 375
Query: 191 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN----EISYNAMVA 246
+++ A ++F + + + +W +++ G Q+G A F QM + N EI++ +++
Sbjct: 376 NVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Query: 247 GYVQSNKMDMARELFEAMPS------RNVSSWNTMITGYGQNGDIAQARKLFD-MMPQRD 299
++ R+LF M S R + + M+ G+ G + +A +L + M+ + +
Sbjct: 436 ACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPN 495
Query: 300 CVSWAAIISG 309
+ W A++S
Sbjct: 496 EMVWLALLSA 505
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 275/685 (40%), Positives = 387/685 (56%), Gaps = 33/685 (4%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
N ++ Y R R L DAR++FD M DVVSWN+++ YA+ G A E+F +M ++
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 116 SWNGLLAAYV---------HNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARK 166
+ + V H+ + C S+ + NCL+ + K M+ A
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 167 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGM 222
+F M V+DVVSWN M++GY+Q G A LF++ + DV TW+A +SGY Q G+
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 223 LDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS-------- 270
EA QM + NE++ ++++G + +E+ +
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 271 ---SWNTMITGYGQNGDIAQARKLFDMMP--QRDCVSWAAIISGYAQTGHYEEALNMFIE 325
N +I Y + + AR +FD + +RD V+W +I GY+Q G +AL + E
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 326 I-KRDGES-LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE-TGCFVGNALLGMYFK 382
+ + D ++ N T SCAL CA +AAL +GKQIH ++ FV N L+ MY K
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK 525
Query: 383 CGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 442
CGSI +A VF+ + K+ V+W +++ GY HG+G++AL +F+ M+ IG K D +T++ V
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVV 585
Query: 443 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 502
L ACSH+G+ID+G EYF M + V+P +HY C++DLLGRAGRL A L+ MP EP
Sbjct: 586 LYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEP 645
Query: 503 PAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRS 562
P W A L RIHG ELGE AAE + ++ ++ G Y LLSNLYA +GRW D +RS
Sbjct: 646 PPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRS 705
Query: 563 RMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKL 622
MR GV+K G SWVE F VGD HP IY L + +++ GYV T
Sbjct: 706 LMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGF 765
Query: 623 VLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVG 682
LHDV++EEK+ +L HSEKLA+A+GILT P G IR+ KNLRVC DCH A ++S+I+
Sbjct: 766 ALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIID 825
Query: 683 RLIILRDSHRFHHFNEGICSCGDYW 707
IILRDS RFHHF G CSC YW
Sbjct: 826 HDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 146/564 (25%), Positives = 234/564 (41%), Gaps = 108/564 (19%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKD--VVSWNAMLSGYAQNGYADEAREVF--------- 106
+++ Y+ L A L P D V WN+++ Y NG A++ +F
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 107 ---YQMPH---------------------------KNAISWNGLLAAYVHNGRIEEACRL 136
Y P N N L+A Y + +A ++
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 137 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-----DVVSWNTMISGYAQDGD 191
FD S W+++SWN ++ + K A ++F +M D ++ ++ A G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 192 MSQAKNL----FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAG 247
S K L Q++F +V Y + GM+DEA T F M K+ +S+NAMVAG
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 248 YVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 303
Y Q + + A LFE M +V +W+ I+GY Q G
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG-------------------- 344
Query: 304 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV- 362
GY EAL + ++ G N T LS CA + AL GK+IH +
Sbjct: 345 ----LGY-------EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 363 ------KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI--EEKDVVSWNTMIAGYARH 414
K G+ V N L+ MY KC + A +F+ + +E+DVV+W MI GY++H
Sbjct: 394 YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Query: 415 GFGKQALMVFESM--KTIGVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNKDYSVTPS 471
G +AL + M + +P+ T+ L AC+ + G + + Y++ + P
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE--LG--EKAA 527
C+ID+ + G + +A+ + NM +W +L+ +HG E LG ++
Sbjct: 514 FVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 528 EMVFKMEPHNSGMYVLLSNLYAAS 551
+ FK++ LL LYA S
Sbjct: 572 RIGFKLDG-----VTLLVVLYACS 590
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 189/433 (43%), Gaps = 59/433 (13%)
Query: 157 KRKMLGAARKLFDKMHVRDVVSWNT---MISGYAQDGDMSQAKNLFDQSPHQD--VFTWT 211
K K + + + K+ +++ N +IS Y G +S A +L + P D V+ W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 212 AMVSGYVQNGMLDEARTFFDQM------PQKNEISYNAMVAGYVQSNKMDMARELFEAMP 265
+++ Y NG ++ F M P + G + S + + +
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 266 S--RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 323
NV N ++ Y + ++ ARK+FD M D VSW +II YA+ G + AL MF
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 324 IEIKRD-GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 382
+ + G + T L CA + LGKQ+H V + FVGN L+ MY K
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 383 CGSIGEANDVFEGIEEKDVVSWNTMIA--------------------------------- 409
CG + EAN VF + KDVVSWN M+A
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 410 --GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNKDY 466
GYA+ G G +AL V M + G+KP+E+T++ VLS C+ G + G E + Y++
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 467 SVTPSSKH-----YTCMIDLLGRAGRLEEAQDLMRNM-PFEPPAASWGALLGASRIHGNT 520
+ + +ID+ + +++ A+ + ++ P E +W ++G HG+
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD- 455
Query: 521 ELGEKAAEMVFKM 533
KA E++ +M
Sbjct: 456 --ANKALELLSEM 466
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 159/350 (45%), Gaps = 19/350 (5%)
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDC--VSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
+I+ Y G ++ A L P D W ++I Y G + L +F + +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 333 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 392
+ TF C +I+++ G+ H + TG+ + FVGNAL+ MY +C S+ +A V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT-IGVKPDEITMVGVLSACSHAGL 451
F+ + DVVSWN++I YA+ G K AL +F M G +PD IT+V VL C+ G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
G + + + + C++D+ + G ++EA + NM + SW A++
Sbjct: 245 HSLGKQ-LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMV 302
Query: 512 GASRIHGNTELG--EKAAEMVFKMEPHNSGMYVLLSNL----YAASGRWADAGNMRSRMR 565
G +++G E A + KM+ M V+ + YA G +A + +M
Sbjct: 303 A-----GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 566 DVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREG 615
G+ K + + V + +VG H ++ YA +DL+ G
Sbjct: 358 SSGI-KPNEVTLISVLSGCA--SVGALMHGKEIHCYAIKYPIDLRKNGHG 404
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/713 (35%), Positives = 406/713 (56%), Gaps = 18/713 (2%)
Query: 12 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 71
+ +P + YN ++ Y + AR +FD++PQ +L SWN +L Y + + +
Sbjct: 32 IIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEM 91
Query: 72 RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM-----PHKNAISWNGLLAAYVH 126
F+ +P +D V+WN ++ GY+ +G A + + M + ++ +L
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 127 NGRIEEACRLFDS--KSDWE--LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 182
NG + ++ K +E L+ + L+ + + A+K+F + R+ V +N++
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 183 ISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNE 238
+ G G + A LF + +D +W AM+ G QNG+ EA F +M + ++
Sbjct: 212 MGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 239 ISYNAMVAGYVQSNKMDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFDM 294
+ +++ ++ +++ + N + + +I Y + + A+ +FD
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 295 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 354
M Q++ VSW A++ GY QTG EEA+ +F++++R G + T A+S CA++++LE G
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 414
Q HG+ + +G V N+L+ +Y KCG I ++ +F + +D VSW M++ YA+
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 415 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH 474
G + + +F+ M G+KPD +T+ GV+SACS AGL+++G YF M +Y + PS H
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 475 YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 534
Y+CMIDL R+GRLEEA + MPF P A W LL A R GN E+G+ AAE + +++
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELD 570
Query: 535 PHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFH 594
PH+ Y LLS++YA+ G+W +R MR+ V+K G SW++ + K+H F+ D
Sbjct: 571 PHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESS 630
Query: 595 PEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPA 654
P D+IYA LEEL+ K+ GY T V HDVEE K ML YHSE+LA+AFG++ +P+
Sbjct: 631 PYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPS 690
Query: 655 GRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
G+PIRV KNLRVC DCHNA KHIS + GR I++RD+ RFH F +G CSCGD+W
Sbjct: 691 GQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 155/371 (41%), Gaps = 71/371 (19%)
Query: 197 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDM 256
N+ P+ + F + +V Y AR FD++PQ N S+N ++ Y ++ +
Sbjct: 31 NIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISE 90
Query: 257 ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHY 316
FE +P R+ +WN +I GY +G + A K ++ M RD +
Sbjct: 91 MESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSA-------------- 135
Query: 317 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 376
+L R T L + + LGKQIHGQV+K G+E+ VG+ L
Sbjct: 136 ---------------NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 180
Query: 377 LGMYFKCGSIGEANDVFEGIE------------------------------EKDVVSWNT 406
L MY G I +A VF G++ EKD VSW
Sbjct: 181 LYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAA 240
Query: 407 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 466
MI G A++G K+A+ F MK G+K D+ VL AC G I+ G + + +
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR-- 298
Query: 467 SVTPSSKHY---TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 523
T H + +ID+ + L A+ + M + SW A++ +G T
Sbjct: 299 --TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVG---YGQTGRA 352
Query: 524 EKAAEMVFKME 534
E+A ++ M+
Sbjct: 353 EEAVKIFLDMQ 363
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 141/342 (41%), Gaps = 56/342 (16%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G A +VF + R++V YN+++ G L A LF M ++D VSW
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSW-------- 238
Query: 64 RNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----------PHKN 113
AM+ G AQNG A EA E F +M P +
Sbjct: 239 -----------------------AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 114 AISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV 173
+ G L A ++ G+ AC + + D + + L+ + K K L A+ +FD+M
Sbjct: 276 VLPACGGLGA-INEGKQIHACIIRTNFQD-HIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 174 RDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTF 229
++VVSW M+ GY Q G +A +F D +T +S L+E F
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 230 FDQMPQKNEISY----NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDI 285
+ I Y N++V Y + +D + LF M R+ SW M++ Y Q G
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA 453
Query: 286 AQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMF 323
+ +LFD M Q D V+ +IS ++ G E+ F
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 56/283 (19%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD----------------- 51
A VF+ M +++ VS+ AM+ GY + R A +F M QR
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM-QRSGIDPDHYTLGQAISACA 382
Query: 52 -------------------LVSW----NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNA 88
L+ + N ++T Y + + D+ RLF+ M +D VSW A
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA 442
Query: 89 MLSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFD-SKSDW 143
M+S YAQ G A E ++F +M + ++ G+++A G +E+ R F S++
Sbjct: 443 MVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEY 502
Query: 144 ELIS----WNCLMGGFVKRKMLGAARKLFDKMHV-RDVVSWNTMISGYAQDGDMS----Q 194
++ ++C++ F + L A + + M D + W T++S G++
Sbjct: 503 GIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWA 562
Query: 195 AKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN 237
A++L + PH +T + S Y G D M +KN
Sbjct: 563 AESLIELDPHHPA-GYTLLSSIYASKGKWDSVAQLRRGMREKN 604
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G D + R+FN M R +VS+ AM+S Y + R LFDKM Q L V LTG +
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 64 ----RNRRLGDARRLFDSMPQK-----DVVSWNAMLSGYAQNGYADEAREVFYQMPH-KN 113
R + +R F M + + ++ M+ ++++G +EA MP +
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPD 539
Query: 114 AISWNGLLAAYVHNGRIE 131
AI W LL+A + G +E
Sbjct: 540 AIGWTTLLSACRNKGNLE 557
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 494 bits (1272), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/575 (41%), Positives = 352/575 (61%), Gaps = 40/575 (6%)
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
V +V WN ++ YA+ G + A+ +FD+ P++D+ +W MV+GY + G+L+EAR FD+
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 233 MPQKNEISYNAMVAGYVQSNKMDMARELFEAM-------PSRNVSS-------------- 271
M +K+ S+ AMV GYV+ ++ + A L+ M P+ S
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 272 -------------------WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQ 312
W++++ YG+ G I +AR +FD + ++D VSW ++I Y +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 313 TGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 372
+ + E ++F E+ E N TF+ L+ CAD+ ELGKQ+HG + + G++ F
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 373 GNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 432
++L+ MY KCG+I A V +G + D+VSW ++I G A++G +AL F+ + G
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 433 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 492
KPD +T V VLSAC+HAGL+++G E+FYS+ + + ++ +S HYTC++DLL R+GR E+ +
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLK 476
Query: 493 DLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASG 552
++ MP +P W ++LG +GN +L E+AA+ +FK+EP N YV ++N+YAA+G
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 553 RWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR 612
+W + G MR RM+++GV K G SW E++ K H F D HP ++I FL EL KM+
Sbjct: 537 KWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK 596
Query: 613 REGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHN 672
EGYV +T LVLHDVE+E+KE L YHSEKLAVAF IL+ G I+V KNLR C DCH
Sbjct: 597 EEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHG 656
Query: 673 AIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
AIK IS I R I +RDS RFH F G CSCGDYW
Sbjct: 657 AIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 215/486 (44%), Gaps = 68/486 (13%)
Query: 52 LVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
+V WN +L Y + L DAR++FD MP +D+ SWN M++GYA+ G +EAR++F +M
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFD-----SKSDWELISWNCLMGGFVKRKMLGAARK 166
K++ SW ++ YV + EEA L+ S + + + + K + ++
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 167 LFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 221
+ + VR D V W++++ Y + G + +A+N+FD+ +DV +WT+M+ Y ++
Sbjct: 240 IHGHI-VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298
Query: 222 MLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW----N 273
E + F ++ + NE ++ ++ ++ +++ M + +
Sbjct: 299 RWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASS 358
Query: 274 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 333
+++ Y + G+I A+ + D P+ D VSW ++I G AQ G +EAL F + + G
Sbjct: 359 SLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKP 418
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
+ TF LS C H +V+ G E F
Sbjct: 419 DHVTFVNVLSACT-----------HAGLVEKGLE------------------------FF 443
Query: 394 EGIEEKDVVS-----WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH 448
I EK +S + ++ AR G +Q V M +KP + VL CS
Sbjct: 444 YSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMP---MKPSKFLWASVLGGCST 500
Query: 449 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP----FEPPA 504
G ID E + K P + Y M ++ AG+ EE + + M + P
Sbjct: 501 YGNIDLAEEAAQELFKIEPENPVT--YVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPG 558
Query: 505 ASWGAL 510
+SW +
Sbjct: 559 SSWTEI 564
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 193/440 (43%), Gaps = 36/440 (8%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK 81
V +N ++ Y + AR +FD+MP RDL SWNVM+ GY L +AR+LFD M +K
Sbjct: 121 VIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEAC------- 134
D SW AM++GY + +EA ++ M N + C
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 135 --RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDM 192
+ + D + + W+ LM + K + AR +FDK+ +DVVSW +MI Y +
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 193 SQAKNLFD------QSPHQDVFTWTAMVSGYVQNGMLDE------ARTFFDQMPQKNEIS 240
+ +LF + P++ F + L + R FD +
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY----SFA 356
Query: 241 YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM----P 296
+++V Y + ++ A+ + + P ++ SW ++I G QNG +A K FD++
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 297 QRDCVSWAAIISGYAQTGHYEEALNMFIEI-KRDGESLNRSTFSCALSTCADIAALELGK 355
+ D V++ ++S G E+ L F I ++ S ++C + A E
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE--- 473
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIG---EANDVFEGIEEKDVVSWNTMIAGYA 412
Q+ + + + F+ ++LG G+I EA IE ++ V++ TM YA
Sbjct: 474 QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYA 533
Query: 413 RHGFGKQALMVFESMKTIGV 432
G ++ + + M+ IGV
Sbjct: 534 AAGKWEEEGKMRKRMQEIGV 553
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 165/385 (42%), Gaps = 71/385 (18%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRL 68
A +VF+ MP R S+N M++GY AR LFD+M ++D SW M+TGYV+ +
Sbjct: 139 ARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQP 198
Query: 69 GDA-------RRLFDSMPQ---------------------------------KDVVSWNA 88
+A +R+ +S P D V W++
Sbjct: 199 EEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSS 258
Query: 89 MLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW 148
++ Y + G DEAR +F ++ K+ +SW ++ Y + R E LF EL+
Sbjct: 259 LMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS-----ELVGS 313
Query: 149 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT-------------MISGYAQDGDMSQA 195
+ +L A L + + V + T ++ Y + G++ A
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 196 KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQS 251
K++ D P D+ +WT+++ G QNG DEA +FD + + + +++ +++ +
Sbjct: 374 KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHA 433
Query: 252 NKMDMARELFEAMPSRNVSS-----WNTMITGYGQNGDIAQARKLFDMMPQRDC-VSWAA 305
++ E F ++ ++ S + ++ ++G Q + + MP + WA+
Sbjct: 434 GLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWAS 493
Query: 306 IISGYAQTGHY---EEALNMFIEIK 327
++ G + G+ EEA +I+
Sbjct: 494 VLGGCSTYGNIDLAEEAAQELFKIE 518
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%)
Query: 336 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 395
ST+ + C+ ALE GK++H + +G+ G + N LL MY KCGS+ +A VF+
Sbjct: 86 STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145
Query: 396 IEEKDVVSWNTMIAGYARHGFGKQALMVFESM 427
+ +D+ SWN M+ GYA G ++A +F+ M
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust.
Identities = 288/824 (34%), Positives = 441/824 (53%), Gaps = 124/824 (15%)
Query: 8 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF----------------------- 44
+A +F+ P R SY +++ G+ R+ R A+ LF
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 45 ---DKMPQR-------------DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNA 88
D++ R D+ ++ Y++ D R++FD M +++VV+W
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 89 MLSGYAQNGYADEAREVFYQMPHK----NAISWN---GLLAAYVHNGR-IEEACRLFDSK 140
++SGYA+N DE +F +M ++ N+ ++ G+LA GR ++ + +
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 141 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL-- 198
D + N L+ ++K + AR LFDK V+ VV+WN+MISGYA +G +A +
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 199 ----------------------------FDQSPHQDVFTW---------TAMVSGYVQ-N 220
F + H V + TA++ Y +
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 221 GMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM---------------- 264
MLD R F + N +S+ AM++G++Q++ + A +LF M
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 265 -------PS------------RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAA 305
PS R+ + ++ Y + G + +A K+F + +D V+W+A
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 306 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI-AALELGKQIHGQVVKT 364
+++GYAQTG E A+ MF E+ + G N TFS L+ CA A++ GKQ HG +K+
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 365 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVF 424
++ V +ALL MY K G+I A +VF+ EKD+VSWN+MI+GYA+HG +AL VF
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 425 ESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGR 484
+ MK VK D +T +GV +AC+HAGL++ G +YF M +D + P+ +H +CM+DL R
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644
Query: 485 AGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLL 544
AG+LE+A ++ NMP + W +L A R+H TELG AAE + M+P +S YVLL
Sbjct: 645 AGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLL 704
Query: 545 SNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFL 604
SN+YA SG W + +R M + V+K GYSW+EV+NK + F GD HP KD+IY L
Sbjct: 705 SNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKL 764
Query: 605 EELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNL 664
E+L +++ GY T VL D+++E KE +L HSE+LA+AFG++ P G P+ +IKNL
Sbjct: 765 EDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNL 824
Query: 665 RVCEDCHNAIKHISKIVGRLIILRDSHRFHHF-NEGICSCGDYW 707
RVC DCH IK I+KI R I++RDS+RFHHF ++G+CSCGD+W
Sbjct: 825 RVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 224/474 (47%), Gaps = 38/474 (8%)
Query: 61 GYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGL 120
G V + RL +A LFD P +D S+ ++L G++++G EA+ +F
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN------------ 83
Query: 121 LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN 180
+H +E C +F S + L G R++ K + DV
Sbjct: 84 ----IHRLGMEMDCSIFSSVLKVSATLCDELFG----RQLHCQCIKF---GFLDDVSVGT 132
Query: 181 TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQK 236
+++ Y + + + +FD+ ++V TWT ++SGY +N M DE T F +M Q
Sbjct: 133 SLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQP 192
Query: 237 NEISYNAMVAGY----VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF 292
N ++ A + V + + + + + + N++I Y + G++ +AR LF
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252
Query: 293 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALE 352
D + V+W ++ISGYA G EAL MF ++ + L+ S+F+ + CA++ L
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312
Query: 353 LGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGY 411
+Q+H VVK G+ + AL+ Y KC ++ +A +F+ I +VVSW MI+G+
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
++ ++A+ +F MK GV+P+E T +L+A +I + + +Y S
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYE--RS 427
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEK 525
S T ++D + G++EEA + + + +W A+L G TE K
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETEAAIK 480
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 180/378 (47%), Gaps = 13/378 (3%)
Query: 185 GYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAM 244
G + A NLFD+SP +D ++ +++ G+ ++G EA+ F + + + +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI-HRLGMEMDCS 94
Query: 245 VAGYVQSNKMDMARELFEAMPS---------RNVSSWNTMITGYGQNGDIAQARKLFDMM 295
+ V + ELF +VS +++ Y + + RK+FD M
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
+R+ V+W +ISGYA+ +E L +F+ ++ +G N TF+ AL A+ G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 415
Q+H VVK G + V N+L+ +Y KCG++ +A +F+ E K VV+WN+MI+GYA +G
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 416 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 475
+AL +F SM+ V+ E + V+ C++ + R TE + Y
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL-RFTEQLHCSVVKYGFLFDQNIR 333
Query: 476 TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL-GASRIHGNTELGEKAAEMVFK-M 533
T ++ + + +A L + + SW A++ G + G E + +EM K +
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 534 EPHNSGMYVLLSNLYAAS 551
P+ V+L+ L S
Sbjct: 394 RPNEFTYSVILTALPVIS 411
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 44/179 (24%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ-------------- 49
G + A +VF+ + + V+++AM++GY + A +F ++ +
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Query: 50 --------------------------RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV 83
L + +LT Y + + A +F +KD+
Sbjct: 502 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD 138
VSWN+M+SGYAQ+G A +A +VF +M + + +++ G+ AA H G +EE + FD
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFD 620
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 487 bits (1253), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/735 (34%), Positives = 419/735 (57%), Gaps = 37/735 (5%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNAR-------FSLARDLFDKMPQRDLVSWN 56
G+ D A +F+ M R ++S+N++ + Y +N FSL R D++ VS
Sbjct: 209 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTL 267
Query: 57 VMLTGYVRNRRLGDA------RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
+ + G+V +++ G + FDS+ V N +L YA G + EA VF QMP
Sbjct: 268 LSVLGHVDHQKWGRGIHGLVVKMGFDSV----VCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 111 HKNAISWNGLLAAYVHNGRIEEA----CRLFDSKSDWELISWN-----CLMGGFVKRKML 161
K+ ISWN L+A++V++GR +A C + S +++ C F ++ +
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 383
Query: 162 GAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 221
+ + ++ N ++S Y + G+MS+++ + Q P +DV W A++ GY ++
Sbjct: 384 LHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDE 442
Query: 222 MLDEARTFFDQM----PQKNEISY-NAMVAGYVQSNKMDMARELFEAMPSRNVSS----W 272
D+A F M N I+ + + A + + ++ + L + S S
Sbjct: 443 DPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 502
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
N++IT Y + GD++ ++ LF+ + R+ ++W A+++ A GH EE L + +++ G S
Sbjct: 503 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 562
Query: 333 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 392
L++ +FS LS A +A LE G+Q+HG VK G+E F+ NA MY KCG IGE +
Sbjct: 563 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 622
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI 452
+ + SWN +I+ RHG+ ++ F M +G+KP +T V +L+ACSH GL+
Sbjct: 623 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLV 682
Query: 453 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
D+G Y+ + +D+ + P+ +H C+IDLLGR+GRL EA+ + MP +P W +LL
Sbjct: 683 DKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 742
Query: 513 ASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 572
+ +IHGN + G KAAE + K+EP + +YVL SN++A +GRW D N+R +M ++K
Sbjct: 743 SCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKK 802
Query: 573 TGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEK 632
SWV++++K+ F +GD HP+ IYA LE++ ++ GYV+ T L D +EE+K
Sbjct: 803 QACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQK 862
Query: 633 EHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHR 692
EH L HSE+LA+A+ +++ P G +R+ KNLR+C DCH+ K +S+++GR I+LRD +R
Sbjct: 863 EHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYR 922
Query: 693 FHHFNEGICSCGDYW 707
FHHF G+CSC DYW
Sbjct: 923 FHHFERGLCSCKDYW 937
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 159/572 (27%), Positives = 268/572 (46%), Gaps = 63/572 (11%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G A +F+ MP R+ VS+N M+SG +R + + F KM + + ++ V
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 64 RNRRLGDARRLFDSMPQ-----------KDVVSWNAMLSGYAQNGYADEAREVFYQMPHK 112
G + +F Q DV A+L Y G +R+VF +MP +
Sbjct: 66 T--ACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 113 NAISWNGLLAAYVHNGRIEEACRLFD---------SKSDWELISWNCLMGGFVK-----R 158
N +SW L+ Y G EE ++ +++ L+ +C G +K R
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGR 180
Query: 159 KMLGAARK--LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 216
+++G K L K+ V N++IS G++ A +FDQ +D +W ++ +
Sbjct: 181 QIIGQVVKSGLESKLAVE-----NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 217 YVQNGMLDEA-------RTFFDQMPQKNEISYNAMVAGYVQSNKMD------MARELFEA 263
Y QNG ++E+ R F D++ +S V G+V K + + F++
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 294
Query: 264 MPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 323
+ V NT++ Y G +A +F MP +D +SW ++++ + G +AL +
Sbjct: 295 V----VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 350
Query: 324 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 383
+ G+S+N TF+ AL+ C E G+ +HG VV +G +GNAL+ MY K
Sbjct: 351 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI 410
Query: 384 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 443
G + E+ V + +DVV+WN +I GYA +AL F++M+ GV + IT+V VL
Sbjct: 411 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 470
Query: 444 SACSHAG-LIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE 501
SAC G L++RG + Y ++ + K+ +I + + G L +QDL +
Sbjct: 471 SACLLPGDLLERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-N 527
Query: 502 PPAASWGALLGASRIHGNTELGEKAAEMVFKM 533
+W A+L A+ HG+ GE+ ++V KM
Sbjct: 528 RNIITWNAMLAANAHHGH---GEEVLKLVSKM 556
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 160/617 (25%), Positives = 283/617 (45%), Gaps = 66/617 (10%)
Query: 11 RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP------QRDLVSWNVMLTGYVR 64
+VF MP R+ VS+ +++ GY D++ M + +S + G ++
Sbjct: 115 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 174
Query: 65 NRRLGDA--RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA 122
+ LG ++ S + + N+++S G D A +F QM ++ ISWN + A
Sbjct: 175 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 234
Query: 123 AYVHNGRIEEACRLF-------DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 175
AY NG IEE+ R+F D + + + ++G +K L KM
Sbjct: 235 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 294
Query: 176 VVS-WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
VV NT++ YA G +A +F Q P +D+ +W ++++ +V +G +A M
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 354
Query: 235 QK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIA 286
N +++ + +A + + R L + N N +++ YG+ G+++
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 414
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTC- 345
++R++ MP+RD V+W A+I GYA+ ++AL F ++ +G S N T LS C
Sbjct: 415 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 474
Query: 346 --ADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 403
D+ LE GK +H +V G+E+ V N+L+ MY KCG + + D+F G++ +++++
Sbjct: 475 LPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 532
Query: 404 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE------ 457
WN M+A A HG G++ L + M++ GV D+ + LSA + +++ G +
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 592
Query: 458 --------YFYSMNKDY----------------SVTPSSKHYTCMIDLLGRAGRLEEAQD 493
+ ++ D SV S + +I LGR G EE
Sbjct: 593 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 652
Query: 494 L---MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV---FKMEPHNSGMYVLLSNL 547
M M +P ++ +LL A G + G +M+ F +EP ++ +L
Sbjct: 653 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI-DL 711
Query: 548 YAASGRWADAGNMRSRM 564
SGR A+A S+M
Sbjct: 712 LGRSGRLAEAETFISKM 728
Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 217/460 (47%), Gaps = 32/460 (6%)
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLL 121
Y + R+ AR LFD MP ++ VSWN M+SG + G E E F +M + ++
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 122 AAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 181
A+ V AC S + + GFV + L + DV
Sbjct: 62 ASLV------TACGRSGS-----MFREGVQVHGFVAKSGL-----------LSDVYVSTA 99
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----N 237
++ Y G +S ++ +F++ P ++V +WT+++ GY G +E + M + N
Sbjct: 100 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCN 159
Query: 238 EISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLFD 293
E S + +++ + R++ + + S N++I+ G G++ A +FD
Sbjct: 160 ENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 219
Query: 294 MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALEL 353
M +RD +SW +I + YAQ GH EE+ +F ++R + +N +T S LS + +
Sbjct: 220 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 279
Query: 354 GKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYAR 413
G+ IHG VVK G+++ V N LL MY G EAN VF+ + KD++SWN+++A +
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 414 HGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSK 473
G AL + SM + G + +T L+AC ++G + + + +
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQI 398
Query: 474 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 513
++ + G+ G + E++ ++ MP A W AL+G
Sbjct: 399 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVA-WNALIGG 437
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 379 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
MY K G + A +F+ + ++ VSWNTM++G R G + + F M +G+KP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 439 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
+ +++AC +G + R + + T ++ L G G + ++ + M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 499 PFEPPAASWGALL 511
P + SW +L+
Sbjct: 121 P-DRNVVSWTSLM 132
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/658 (38%), Positives = 375/658 (56%), Gaps = 41/658 (6%)
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG-- 119
Y + R+ DAR++FD MP+KD + WN M+SGY +N E+ +VF + +++ +
Sbjct: 164 YFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTT 223
Query: 120 ---LLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK------RKMLGAARKLFDK 170
+L A + ++ + S + ++ GF+ + +G+A LF +
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA--LFRE 281
Query: 171 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 230
D+V++N MI GY +G+ + +LF + + +G + T
Sbjct: 282 FRKPDIVAYNAMIHGYTSNGETELSLSLFKE---------------LMLSGARLRSSTLV 326
Query: 231 DQMPQKNEISYNAMVAGY-VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQAR 289
+P + + GY ++SN + A S + T Y + +I AR
Sbjct: 327 SLVPVSGHLMLIYAIHGYCLKSNFLSHA------------SVSTALTTVYSKLNEIESAR 374
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
KLFD P++ SW A+ISGY Q G E+A+++F E+++ S N T +C LS CA +
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 409
AL LGK +H V T +E+ +V AL+GMY KCGSI EA +F+ + +K+ V+WNTMI+
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMIS 494
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 469
GY HG G++AL +F M G+ P +T + VL ACSHAGL+ G E F SM Y
Sbjct: 495 GYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE 554
Query: 470 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 529
PS KHY CM+D+LGRAG L+ A + M EP ++ W LLGA RIH +T L +E
Sbjct: 555 PSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEK 614
Query: 530 VFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTV 589
+F+++P N G +VLLSN+++A + A +R + + K GY+ +E+ H FT
Sbjct: 615 LFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTS 674
Query: 590 GDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGI 649
GD HP+ IY LE+L+ KMR GY T+L LHDVEEEE+E M+K HSE+LA+AFG+
Sbjct: 675 GDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGL 734
Query: 650 LTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+ G IR+IKNLRVC DCH K ISKI R+I++RD++RFHHF +G+CSCGDYW
Sbjct: 735 IATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 172/414 (41%), Gaps = 98/414 (23%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARF----SLARDLFDKMPQR-------DLV-- 53
+ A +VF+ MP + ++ +N MISGY +N + + RDL ++ R D++
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Query: 54 -----------------------SWNVMLTGYVR------NRRLGDARRLFDSMPQKDVV 84
S + +LTG++ ++G A LF + D+V
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA--LFREFRKPDIV 288
Query: 85 SWNAMLSGYAQNGYADEAREVFYQM----------------P-----------HKNAISW 117
++NAM+ GY NG + + +F ++ P H +
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKS 348
Query: 118 N---------GLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLF 168
N L Y IE A +LFD + L SWN ++ G+ + + A LF
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 169 DKMHVRDV----VSWNTMISGYAQDGDMSQAKNLFDQSPHQD----VFTWTAMVSGYVQN 220
+M + V+ ++S AQ G +S K + D D ++ TA++ Y +
Sbjct: 409 REMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 221 GMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMI 276
G + EAR FD M +KNE+++N M++GY + A +F M + ++ ++ ++
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL 528
Query: 277 TGYGQNGDIAQARKLFDMMPQR-----DCVSWAAIISGYAQTGHYEEALNMFIE 325
G + + ++F+ M R +A ++ + GH + AL FIE
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ-FIE 581
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 484 bits (1245), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/655 (39%), Positives = 381/655 (58%), Gaps = 35/655 (5%)
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLL 121
Y R + +G+AR LFD MP +D+ SWNAM+SGY Q+G A EA + + ++++ LL
Sbjct: 195 YSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLL 254
Query: 122 AAYVHNGRIEEACRL----FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 177
+A G + + EL N L+ + + L +K+FD+M+VRD++
Sbjct: 255 SACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLI 314
Query: 178 SWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 233
SWN++I Y + +A +LF + D T ++ S Q G + R+
Sbjct: 315 SWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRS----- 369
Query: 234 PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFD 293
V G+ L + +++ N ++ Y + G + AR +F+
Sbjct: 370 -----------VQGFT----------LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 294 MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALE 352
+P D +SW IISGYAQ G EA+ M+ ++ +GE + N+ T+ L C+ AL
Sbjct: 409 WLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 353 LGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYA 412
G ++HG+++K G FV +L MY KCG + +A +F I + V WNT+IA +
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHG 528
Query: 413 RHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSS 472
HG G++A+M+F+ M GVKPD IT V +LSACSH+GL+D G F M DY +TPS
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSL 588
Query: 473 KHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFK 532
KHY CM+D+ GRAG+LE A +++M +P A+ WGALL A R+HGN +LG+ A+E +F+
Sbjct: 589 KHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE 648
Query: 533 MEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDC 592
+EP + G +VLLSN+YA++G+W +RS G++K G+S +EV NK+ F G+
Sbjct: 649 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQ 708
Query: 593 FHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTI 652
HP + +Y L L K++ GYV + VL DVE++EKEH+L HSE+LA+AF ++
Sbjct: 709 THPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIAT 768
Query: 653 PAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
PA IR+ KNLRVC DCH+ K ISKI R II+RDS+RFHHF G+CSCGDYW
Sbjct: 769 PAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 213/471 (45%), Gaps = 37/471 (7%)
Query: 26 AMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVS 85
++I Y R AR LFD+MP RD+ SWN M++GY ++ +A L + + D V+
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVT 249
Query: 86 WNAMLSGYAQNGYADEAREVF-YQMPH---KNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
++LS + G + + Y + H N L+ Y GR+ + ++FD
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKN 197
+LISWN ++ + + A LF +M + D ++ ++ S +Q GD+ ++
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRS 369
Query: 198 LFDQSPH-----QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSN 252
+ + +D+ A+V Y + G++D AR F+ +P + IS+N +++GY Q+
Sbjct: 370 VQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNG 429
Query: 253 KMDMARELFEAMP-----SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSW 303
A E++ M + N +W +++ Q G + Q KL + + D
Sbjct: 430 FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVV 489
Query: 304 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 363
++ Y + G E+AL++F +I R + +C A+ L K++ + VK
Sbjct: 490 TSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVK 549
Query: 364 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS-----WNTMIAGYARHGFGK 418
+ T FV LL G + E FE ++ ++ + M+ Y R G +
Sbjct: 550 PDHIT--FV--TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLE 605
Query: 419 QALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG---TEYFYSMNKDY 466
AL +SM ++PD +LSAC G +D G +E+ + + ++
Sbjct: 606 TALKFIKSMS---LQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH 653
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 167/377 (44%), Gaps = 61/377 (16%)
Query: 12 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG---------- 61
+F+ MP R S+NAMISGY ++ A L + + D V+ +L+
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRG 266
Query: 62 ----------------YVRNR---------RLGDARRLFDSMPQKDVVSWNAMLSGYAQN 96
+V N+ RL D +++FD M +D++SWN+++ Y N
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 97 GYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRL---FDSKSDW---ELI 146
A +F +M + ++ L + G I ACR F + W ++
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI-RACRSVQGFTLRKGWFLEDIT 385
Query: 147 SWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD 206
N ++ + K ++ +AR +F+ + DV+SWNT+ISGYAQ+G S+A +++ +
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 207 VF-----TWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAG-----YVQSNKMDM 256
TW +++ Q G L + ++ KN + + V Y + +++
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRL-LKNGLYLDVFVVTSLADMYGKCGRLED 504
Query: 257 ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAIISGYAQ 312
A LF +P N WNT+I +G +G +A LF M + D +++ ++S +
Sbjct: 505 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 564
Query: 313 TGHYEEALNMFIEIKRD 329
+G +E F ++ D
Sbjct: 565 SGLVDEGQWCFEMMQTD 581
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 143/345 (41%), Gaps = 61/345 (17%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM------ 78
N +I Y R + +FD+M RDL+SWN ++ Y N + A LF M
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 345
Query: 79 PQ----------------------------------KDVVSWNAMLSGYAQNGYADEARE 104
P +D+ NA++ YA+ G D AR
Sbjct: 346 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 105 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD----------SKSDWELISWNCLMGG 154
VF +P+ + ISWN +++ Y NG EA +++ ++ W + C G
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 155 FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMV 214
+++ M R L + +++ DV ++ Y + G + A +LF Q P + W ++
Sbjct: 466 ALRQGMKLHGRLLKNGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 524
Query: 215 SGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMP----- 265
+ + +G ++A F +M + + I++ +++ S +D + FE M
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 584
Query: 266 SRNVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIISG 309
+ ++ + M+ YG+ G + A K M Q D W A++S
Sbjct: 585 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 160/371 (43%), Gaps = 66/371 (17%)
Query: 11 RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQ--------------- 49
+VF+ M R +S+N++I Y N + A LF +M P
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 50 -------------------RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAML 90
D+ N ++ Y + + AR +F+ +P DV+SWN ++
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 91 SGYAQNGYADEAREVFYQMPHKNAI-----SWNGLLAAYVHNGRIEEAC----RLFDSKS 141
SGYAQNG+A EA E++ M + I +W +L A G + + RL +
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA----KN 197
++ L + K L A LF ++ + V WNT+I+ + G +A K
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 542
Query: 198 LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSN 252
+ D+ D T+ ++S +G++DE + F+ M I+ Y MV Y ++
Sbjct: 543 MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 602
Query: 253 KMDMARELFEAMPSR-NVSSWNTMITGYGQNGDI----AQARKLFDMMPQRDCVSWAAII 307
+++ A + ++M + + S W +++ +G++ + LF++ P+ V + ++
Sbjct: 603 QLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH--VGYHVLL 660
Query: 308 SG-YAQTGHYE 317
S YA G +E
Sbjct: 661 SNMYASAGKWE 671
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 130/299 (43%), Gaps = 29/299 (9%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV-----SWNVM 58
G DSA VFN +P +S+N +ISGY +N S A ++++ M + + +W +
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 59 LTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA 114
L + L +L + + DV ++ Y + G ++A +FYQ+P N+
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 115 ISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKLFDK 170
+ WN L+A + +G E+A LF D + I++ L+ ++ + F+
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM 577
Query: 171 MHVRDVVS-----WNTMISGYAQDGDMSQA-KNLFDQSPHQDVFTWTAMVSGYVQNGMLD 224
M ++ + M+ Y + G + A K + S D W A++S +G +D
Sbjct: 578 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 637
Query: 225 EART----FFDQMPQKNEISYNAMVAG-YVQSNK---MDMARELFEAMPSRNVSSWNTM 275
+ F+ P+ + Y+ +++ Y + K +D R + R W++M
Sbjct: 638 LGKIASEHLFEVEPE--HVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 480 bits (1235), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/655 (38%), Positives = 383/655 (58%), Gaps = 18/655 (2%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVH 126
A +F ++ + +++ WN M G+A + A +++ M N+ ++ +L +
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 127 NGRIEEACRL----FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 182
+ +E ++ D +L L+ +V+ L A K+FDK RDVVS+ +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 183 ISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN----E 238
I GYA G + A+ LFD+ P +DV +W AM+SGY + G EA F M + N E
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 239 ISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDM 294
+ +V+ QS +++ R++ + N+ N +I Y + G++ A LF+
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 295 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 354
+P +D +SW +I GY Y+EAL +F E+ R GE+ N T L CA + A+++G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 355 KQIHGQVVK--TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYA 412
+ IH + K G + +L+ MY KCG I A+ VF I K + SWN MI G+A
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 413 RHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSS 472
HG + +F M+ IG++PD+IT VG+LSACSH+G++D G F +M +DY +TP
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Query: 473 KHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFK 532
+HY CMIDLLG +G +EA++++ M EP W +LL A ++HGN ELGE AE + K
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK 566
Query: 533 MEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDC 592
+EP N G YVLLSN+YA++GRW + R+ + D G++KV G S +E+ + +H+F +GD
Sbjct: 567 IEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 626
Query: 593 FHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTI 652
FHP IY LEE+++ + + G+V T VL ++EEE KE L++HSEKLA+AFG+++
Sbjct: 627 FHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 686
Query: 653 PAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
G + ++KNLRVC +CH A K ISKI R II RD RFHHF +G+CSC DYW
Sbjct: 687 KPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 18/325 (5%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
DL +++ YV+N RL DA ++FD P +DVVS+ A++ GYA GY + A+++F ++P
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 111 HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK 170
K+ +SWN +++ Y G +EA LF + M V + +L +
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 171 MHV--------RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGM 222
+H+ ++ N +I Y++ G++ A LF++ P++DV +W ++ GY +
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 223 LDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWN 273
EA F +M N+++ +++ +D+ R + + R N SS
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 274 T-MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
T +I Y + GDI A ++F+ + + SW A+I G+A G + + ++F +++ G
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 333 LNRSTFSCALSTCADIAALELGKQI 357
+ TF LS C+ L+LG+ I
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHI 492
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 166/330 (50%), Gaps = 26/330 (7%)
Query: 24 YNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV 83
+ ++IS Y++N R A +FDK P RD+VS+ ++ GY + +A++LFD +P KDV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLF-- 137
VSWNAM+SGYA+ G EA E+F M N + +++A +G IE ++
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 138 --DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
D L N L+ + K L A LF+++ +DV+SWNT+I GY +A
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 196 KNLFD------QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNA------ 243
LF ++P DV T +++ G +D R + ++ + NA
Sbjct: 352 LLLFQEMLRSGETP-NDV-TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 244 MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM----PQRD 299
++ Y + ++ A ++F ++ +++SSWN MI G+ +G + LF M Q D
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 300 CVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
+++ ++S + +G + ++F + +D
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQD 499
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 151/341 (44%), Gaps = 58/341 (17%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
++NG + A +VF+ P R VSY A+I GY A+ LFD++P +D+VSWN M++
Sbjct: 180 VQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMIS 239
Query: 61 GYVRNRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREVFYQMPH----K 112
GY +A LF M + +V + ++S AQ+G + R+V +
Sbjct: 240 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS 299
Query: 113 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM- 171
N N L+ Y G +E AC LF+ ++ISWN L+GG+ + A LF +M
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 172 -------------------HVR--DVVSW-------------------NTMISGYAQDGD 191
H+ D+ W ++I YA+ GD
Sbjct: 360 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 192 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAG 247
+ A +F+ H+ + +W AM+ G+ +G D + F +M Q ++I++ +++
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Query: 248 YVQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQNG 283
S +D+ R +F M + + + MI G +G
Sbjct: 480 CSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 273/754 (36%), Positives = 420/754 (55%), Gaps = 76/754 (10%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLF---DSMPQK 81
+ ++S + ++ S AR +F++M R+ V+ N ++ G VR + +A +LF +SM
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306
Query: 82 DVVSWNAMLSGYAQNGYADEA-----REVFYQMPHKNAISW-----NGLLAAYVHNGRIE 131
S+ +LS + + A+E REV + + + NGL+ Y G I
Sbjct: 307 SPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366
Query: 132 EACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN-TMISGYAQDG 190
+A R+F +D + +SWN ++ G + A + + M D++ + T+IS +
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Query: 191 DMSQAKNLFDQSPHQD---------VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY 241
+ AK Q H + V A+++ Y + G L+E R F MP+ +++S+
Sbjct: 427 SLKWAK--LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 242 NAMVAGYVQSNKM------------------------------------DMARELFEAMP 265
N+++ +S + ++ +++
Sbjct: 485 NSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 544
Query: 266 SRNV----SSWNTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISGYAQTGHYEEAL 320
N+ ++ N +I YG+ G++ K+F M +R D V+W ++ISGY +AL
Sbjct: 545 KNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKAL 604
Query: 321 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 380
++ + + G+ L+ ++ LS A +A LE G ++H V+ E+ VG+AL+ MY
Sbjct: 605 DLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMY 664
Query: 381 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDEITM 439
KCG + A F + ++ SWN+MI+GYARHG G++AL +FE+MK G PD +T
Sbjct: 665 SKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTF 724
Query: 440 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 499
VGVLSACSHAGL++ G ++F SM+ Y + P +H++CM D+LGRAG L++ +D + MP
Sbjct: 725 VGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMP 784
Query: 500 FEPPAASWGALLGAS-RIHG-NTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADA 557
+P W +LGA R +G ELG+KAAEM+F++EP N+ YVLL N+YAA GRW D
Sbjct: 785 MKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDL 844
Query: 558 GNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYV 617
R +M+D V+K GYSWV +++ +H F GD HP+ D IY L+EL+ KMR GYV
Sbjct: 845 VKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYV 904
Query: 618 SSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGR----PIRVIKNLRVCEDCHNA 673
T L+D+E+E KE +L YHSEKLAVAF + A R PIR++KNLRVC DCH+A
Sbjct: 905 PQTGFALYDLEQENKEEILSYHSEKLAVAF---VLAAQRSSTLPIRIMKNLRVCGDCHSA 961
Query: 674 IKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
K+ISKI GR IILRDS+RFHHF +G CSC D+W
Sbjct: 962 FKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 158/646 (24%), Positives = 271/646 (41%), Gaps = 126/646 (19%)
Query: 14 NTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARR 73
N +P +S+ G+ ARF +R L+ +D+ N ++ Y+ AR+
Sbjct: 3 NCVP----LSFVQSCVGHRGAARFFHSR-LYKNRLDKDVYLCNNLINAYLETGDSVSARK 57
Query: 74 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN--------------- 118
+FD MP ++ VSW ++SGY++NG EA VF + K I N
Sbjct: 58 VFDEMPLRNCVSWACIVSGYSRNGEHKEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
Query: 119 --GLLAAYVHNGRIEEACRLFDSKSDWELIS--WNCLMGGFVKRKMLGAARKLFDKMHVR 174
G+L +G + + D+ LIS W C+ +G A F + V+
Sbjct: 117 SVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI-------GSVGYALCAFGDIEVK 169
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----------------------------- 205
+ VSWN++IS Y+Q GD A +F +
Sbjct: 170 NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ 229
Query: 206 ------------DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNK 253
D+F + +VS + ++G L AR F+QM +N ++ N ++ G V+
Sbjct: 230 IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKW 289
Query: 254 MDMARELFEAMPSR--------------------------------------------NV 269
+ A +LF M S V
Sbjct: 290 GEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMV 349
Query: 270 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
N ++ Y + G IA AR++F M +D VSW ++I+G Q G + EA+ + ++R
Sbjct: 350 GIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRH 409
Query: 330 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 389
T +LS+CA + +LG+QIHG+ +K G + V NAL+ +Y + G + E
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 390 NDVFEGIEEKDVVSWNTMIAGYARHGFG-KQALMVFESMKTIGVKPDEITMVGVLSACSH 448
+F + E D VSWN++I AR +A++ F + + G K + IT VLSA S
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSS 529
Query: 449 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 508
+ G + + + ++ + +I G+ G ++ + + M +W
Sbjct: 530 LSFGELGKQ-IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWN 588
Query: 509 ALLGASRIHGNTELGEKAAEMVFKM----EPHNSGMYVLLSNLYAA 550
+++ + IH EL KA ++V+ M + +S MY + + +A+
Sbjct: 589 SMI-SGYIH--NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 206/439 (46%), Gaps = 34/439 (7%)
Query: 149 NCLMGGFVKRKM--LGAAR----KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQS 202
NC+ FV+ + GAAR +L+ +DV N +I+ Y + GD A+ +FD+
Sbjct: 3 NCVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM 62
Query: 203 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGY--VQSNKMDM 256
P ++ +W +VSGY +NG EA F M ++ N+ ++ +++ + S +
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122
Query: 257 AREL----FEAMPSRNVSSWNTMITGYGQN-GDIAQARKLFDMMPQRDCVSWAAIISGYA 311
R++ F+ + + N +I+ Y + G + A F + ++ VSW +IIS Y+
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 312 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA--LELGKQIHGQVVKTGYETG 369
Q G A +F ++ DG TF ++T + + L +QI + K+G T
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 370 CFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 429
FVG+ L+ + K GS+ A VF +E ++ V+ N ++ G R +G++A +F M +
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 430 -IGVKPDEITMVGVLSACSHAGL-----IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 483
I V P+ + V +LS+ L + +G E + V ++++
Sbjct: 303 MIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYA 360
Query: 484 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHN--SGMY 541
+ G + +A+ + M + + SW +++ +G +A E M H+ G +
Sbjct: 361 KCGSIADARRVFYFMT-DKDSVSWNSMITGLDQNG---CFIEAVERYKSMRRHDILPGSF 416
Query: 542 VLLSNLYA-ASGRWADAGN 559
L+S+L + AS +WA G
Sbjct: 417 TLISSLSSCASLKWAKLGQ 435
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 475 bits (1222), Expect = e-134, Method: Compositional matrix adjust.
Identities = 277/833 (33%), Positives = 419/833 (50%), Gaps = 129/833 (15%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF------DKMP------- 48
RNG D A RVF+ + + S+ AMISG +N + A LF MP
Sbjct: 234 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 293
Query: 49 --------------------------QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD 82
D N +++ Y L A +F +M Q+D
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLAAYVHNGRIEEACRL 136
V++N +++G +Q GY ++A E+F +M P N ++ L+ A +G + +L
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA--SLVVACSADGTLFRGQQL 411
Query: 137 FDSKSDWELISWNCLMGG----FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDM 192
+ S N + G + K + A F + V +VV WN M+ Y D+
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 193 SQAKNLFDQ------SPHQ---------------------------------DVFTWTAM 213
+ +F Q P+Q + + + +
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 531
Query: 214 VSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS-- 271
+ Y + G LD A + K+ +S+ M+AGY Q N D A F M R + S
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 591
Query: 272 -------------------------------------WNTMITGYGQNGDIAQARKLFDM 294
N ++T Y + G I ++ F+
Sbjct: 592 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 295 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 354
D ++W A++SG+ Q+G+ EEAL +F+ + R+G N TF A+ ++ A ++ G
Sbjct: 652 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 711
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 414
KQ+H + KTGY++ V NAL+ MY KCGSI +A F + K+ VSWN +I Y++H
Sbjct: 712 KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKH 771
Query: 415 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH 474
GFG +AL F+ M V+P+ +T+VGVLSACSH GL+D+G YF SMN +Y ++P +H
Sbjct: 772 GFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEH 831
Query: 475 YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 534
Y C++D+L RAG L A++ ++ MP +P A W LL A +H N E+GE AA + ++E
Sbjct: 832 YVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELE 891
Query: 535 PHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFH 594
P +S YVLLSNLYA S +W R +M++ GV+K G SW+EV+N IH F VGD H
Sbjct: 892 PEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNH 951
Query: 595 PEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPA 654
P D I+ + ++L + GYV +L++++ E+K+ ++ HSEKLA++FG+L++PA
Sbjct: 952 PLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPA 1011
Query: 655 GRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
PI V+KNLRVC DCH IK +SK+ R II+RD++RFHHF G CSC DYW
Sbjct: 1012 TVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 150/616 (24%), Positives = 264/616 (42%), Gaps = 61/616 (9%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRL 68
A +VF+ MP R+ ++N MI LF +M ++ +G + R
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 69 GD----------ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN 118
G AR L+ + VV N ++ Y++NG+ D AR VF + K+ SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 119 GLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLF-----DKMH- 172
+++ N EA RLF ++ + + +L A +K+ +++H
Sbjct: 258 AMISGLSKNECEAEAIRLF-----CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 173 -------VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 225
D N ++S Y G++ A+++F +D T+ +++G Q G ++
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372
Query: 226 ARTFFDQM------PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN----TM 275
A F +M P N ++ ++V + ++L +S N +
Sbjct: 373 AMELFKRMHLDGLEPDSNTLA--SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 276 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 335
+ Y + DI A F + V W ++ Y + +F +++ + N+
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 336 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 395
T+ L TC + LELG+QIH Q++KT ++ +V + L+ MY K G + A D+
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 396 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
KDVVSW TMIAGY ++ F +AL F M G++ DE+ + +SAC+ + G
Sbjct: 551 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 456 TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA----SWGALL 511
+ ++ + ++ L R G++EE+ + FE A +W AL+
Sbjct: 611 QQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFEQTEAGDNIAWNALV 664
Query: 512 GASRIHGNTELGEKAAEMVFKM--EPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 569
+ GN E+A + +M E ++ + S + AAS + NM+ + V
Sbjct: 665 SGFQQSGNN---EEALRVFVRMNREGIDNNNFTFGSAVKAAS----ETANMKQGKQVHAV 717
Query: 570 QKVTGY-SWVEVQNKI 584
TGY S EV N +
Sbjct: 718 ITKTGYDSETEVCNAL 733
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 201/424 (47%), Gaps = 47/424 (11%)
Query: 186 YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMV 245
Y GD+ A +FD+ P + +FTW M+ ++ E F +M +N
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 246 AGYVQSNK-----MDM-----ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 295
+G +++ + D+ AR L++ + V N +I Y +NG + AR++FD +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGL 248
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
+D SW A+ISG ++ EA+ +F ++ G FS LS C I +LE+G+
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 415
Q+HG V+K G+ + +V NAL+ +YF G++ A +F + ++D V++NT+I G ++ G
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 416 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 475
+G++A+ +F+ M G++PD T+ ++ ACS G + RG + ++ ++K
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIE 427
Query: 476 TCMIDLLGRAGRLEEAQD-------------------------------LMRNMPFE--- 501
+++L + +E A D + R M E
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 502 PPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH-NSGMYVLLSNLYAASGRWADAGNM 560
P ++ ++L G+ ELGE+ + K N+ + +L ++YA G+ A ++
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 561 RSRM 564
R
Sbjct: 548 LIRF 551
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 203/448 (45%), Gaps = 43/448 (9%)
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLL 121
Y+ L A ++FD MP++ + +WN M+ A E +F +M +N G
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 122 AAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGA--ARKLFDKMHVRDVVSW 179
+ + EACR GG V ++ AR L+ + VV
Sbjct: 190 SG------VLEACR-----------------GGSVAFDVVEQIHARILYQGLRDSTVVC- 225
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA-RTFFDQ-----M 233
N +I Y+++G + A+ +FD +D +W AM+SG +N EA R F D M
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 234 PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQAR 289
P +++++++ + +++ +L + SS N +++ Y G++ A
Sbjct: 286 P--TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
+F M QRD V++ +I+G +Q G+ E+A+ +F + DG + +T + + C+
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 409
L G+Q+H K G+ + + ALL +Y KC I A D F E ++VV WN M+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 469
Y + + +F M+ + P++ T +L C G ++ G + + K
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK---TN 520
Query: 470 PSSKHYTC--MIDLLGRAGRLEEAQDLM 495
Y C +ID+ + G+L+ A D++
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 7/251 (2%)
Query: 262 EAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALN 321
E M R+VSS I G + + R +F + S+AAI ++ ++E
Sbjct: 16 EPMFLRSVSSSFIFIHGVPRK---LKTRTVFPTLCGTRRASFAAISVYISEDESFQE--K 70
Query: 322 MFIEIKRDGESLNRSTFSCALSTCADI-AALELGKQIHGQVVKTGYETGCFVGNALLGMY 380
++ G N T L C +L+ G+++H Q++K G ++ + L Y
Sbjct: 71 RIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFY 130
Query: 381 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 440
G + A VF+ + E+ + +WN MI A + +F M + V P+E T
Sbjct: 131 LFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 190
Query: 441 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF 500
GVL AC + E ++ + S+ +IDL R G ++ A+ + +
Sbjct: 191 GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
Query: 501 EPPAASWGALL 511
+ +SW A++
Sbjct: 251 K-DHSSWVAMI 260
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 473 bits (1216), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/760 (35%), Positives = 413/760 (54%), Gaps = 66/760 (8%)
Query: 5 HCD-----SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVML 59
HCD S L +F T N +++ Y++ A +LFD+MP+R+ VS+ +
Sbjct: 72 HCDILKKGSCLDLFAT---------NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLA 122
Query: 60 TGYVRNRRLGDARRL------------------FDSMPQKDVVSW--------------- 86
GY +G RL F S+ + ++ W
Sbjct: 123 QGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182
Query: 87 --NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 144
A+++ Y+ G D AR VF + K+ + W G+++ YV NG E++ +L
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 145 LISWNCLMGGFVKRKM-LGAAR-------KLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 196
+ N +K + LGA ++ +V D ++ Y Q GDMS A
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 197 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSN 252
+F++ P DV W+ M++ + QNG +EA F +M + NE + ++++ G
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 253 KMDMARELFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 308
+ +L + ++ N +I Y + + A KLF + ++ VSW +I
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 309 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET 368
GY G +A +MF E R+ S+ TFS AL CA +A+++LG Q+HG +KT
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 369 GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK 428
V N+L+ MY KCG I A VF +E DV SWN +I+GY+ HG G+QAL + + MK
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK 542
Query: 429 TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 488
KP+ +T +GVLS CS+AGLID+G E F SM +D+ + P +HYTCM+ LLGR+G+L
Sbjct: 543 DRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQL 602
Query: 489 EEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLY 548
++A L+ +P+EP W A+L AS N E ++AE + K+ P + YVL+SN+Y
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMY 662
Query: 549 AASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELD 608
A + +WA+ ++R M+++GV+K G SW+E Q +H F+VG HP+ I LE L+
Sbjct: 663 AGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLN 722
Query: 609 LKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRP-IRVIKNLRVC 667
+K R GYV VL D+++EEK+ L HSE+LA+A+G++ +P+ R I ++KNLR+C
Sbjct: 723 MKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRIC 782
Query: 668 EDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
DCH+A+K IS IV R +++RD +RFHHF+ G+CSCGD+W
Sbjct: 783 SDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 159/342 (46%), Gaps = 26/342 (7%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G A +VFN MP+ V ++ MI+ + +N + A DLF +M + +V L+ +
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL 355
Query: 64 RNRRLGDARRLFDSMP--------QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
+G L + + D+ NA++ YA+ D A ++F ++ KN +
Sbjct: 356 NGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEV 415
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKL---- 167
SWN ++ Y + G +A +F ++ ++++ +G + ++
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLA 475
Query: 168 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
+ + V N++I YA+ GD+ A+++F++ DV +W A++SGY +G+ +A
Sbjct: 476 IKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQAL 535
Query: 228 TFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRN-----VSSWNTMITG 278
D M + N +++ +++G + +D +E FE+M + + + M+
Sbjct: 536 RILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRL 595
Query: 279 YGQNGDIAQARKLFDMMPQRDCVS-WAAIISGYAQTGHYEEA 319
G++G + +A KL + +P V W A++S + E A
Sbjct: 596 LGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFA 637
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/728 (34%), Positives = 413/728 (56%), Gaps = 37/728 (5%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNAR-------FSLARDLFDKMPQRDLVSWN 56
G+ D A +F+ M R ++S+N++ + Y +N FSL R D++ VS
Sbjct: 192 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTL 250
Query: 57 VMLTGYVRNRRLGDA------RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
+ + G+V +++ G + FDS+ V N +L YA G + EA VF QMP
Sbjct: 251 LSVLGHVDHQKWGRGIHGLVVKMGFDSV----VCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 111 HKNAISWNGLLAAYVHNGRIEEA----CRLFDSKSDWELISWN-----CLMGGFVKRKML 161
K+ ISWN L+A++V++GR +A C + S +++ C F ++ +
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366
Query: 162 GAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 221
+ + ++ N ++S Y + G+MS+++ + Q P +DV W A++ GY ++
Sbjct: 367 LHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDE 425
Query: 222 MLDEARTFFDQM----PQKNEISY-NAMVAGYVQSNKMDMARELFEAMPSRNVSS----W 272
D+A F M N I+ + + A + + ++ + L + S S
Sbjct: 426 DPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 485
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
N++IT Y + GD++ ++ LF+ + R+ ++W A+++ A GH EE L + +++ G S
Sbjct: 486 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 545
Query: 333 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 392
L++ +FS LS A +A LE G+Q+HG VK G+E F+ NA MY KCG IGE +
Sbjct: 546 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 605
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI 452
+ + SWN +I+ RHG+ ++ F M +G+KP +T V +L+ACSH GL+
Sbjct: 606 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLV 665
Query: 453 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
D+G Y+ + +D+ + P+ +H C+IDLLGR+GRL EA+ + MP +P W +LL
Sbjct: 666 DKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 725
Query: 513 ASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 572
+ +IHGN + G KAAE + K+EP + +YVL SN++A +GRW D N+R +M ++K
Sbjct: 726 SCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKK 785
Query: 573 TGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEK 632
SWV++++K+ F +GD HP+ IYA LE++ ++ GYV+ T L D +EE+K
Sbjct: 786 QACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQK 845
Query: 633 EHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHR 692
EH L HSE+LA+A+ +++ P G +R+ KNLR+C DCH+ K +S+++GR I+LRD +R
Sbjct: 846 EHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYR 905
Query: 693 FHHFNEGI 700
FHHF G+
Sbjct: 906 FHHFERGL 913
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 160/617 (25%), Positives = 283/617 (45%), Gaps = 66/617 (10%)
Query: 11 RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP------QRDLVSWNVMLTGYVR 64
+VF MP R+ VS+ +++ GY D++ M + +S + G ++
Sbjct: 98 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 157
Query: 65 NRRLGDA--RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA 122
+ LG ++ S + + N+++S G D A +F QM ++ ISWN + A
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217
Query: 123 AYVHNGRIEEACRLF-------DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 175
AY NG IEE+ R+F D + + + ++G +K L KM
Sbjct: 218 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 277
Query: 176 VVS-WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
VV NT++ YA G +A +F Q P +D+ +W ++++ +V +G +A M
Sbjct: 278 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 337
Query: 235 QK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIA 286
N +++ + +A + + R L + N N +++ YG+ G+++
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 397
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTC- 345
++R++ MP+RD V+W A+I GYA+ ++AL F ++ +G S N T LS C
Sbjct: 398 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 457
Query: 346 --ADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 403
D+ LE GK +H +V G+E+ V N+L+ MY KCG + + D+F G++ +++++
Sbjct: 458 LPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 515
Query: 404 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE------ 457
WN M+A A HG G++ L + M++ GV D+ + LSA + +++ G +
Sbjct: 516 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 575
Query: 458 --------YFYSMNKDY----------------SVTPSSKHYTCMIDLLGRAGRLEEAQD 493
+ ++ D SV S + +I LGR G EE
Sbjct: 576 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 635
Query: 494 L---MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV---FKMEPHNSGMYVLLSNL 547
M M +P ++ +LL A G + G +M+ F +EP ++ +L
Sbjct: 636 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI-DL 694
Query: 548 YAASGRWADAGNMRSRM 564
SGR A+A S+M
Sbjct: 695 LGRSGRLAEAETFISKM 711
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/560 (27%), Positives = 263/560 (46%), Gaps = 63/560 (11%)
Query: 16 MPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLF 75
MP R+ VS+N M+SG +R + + F KM + + ++ V G + +F
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVT--ACGRSGSMF 58
Query: 76 DSMPQ-----------KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAY 124
Q DV A+L Y G +R+VF +MP +N +SW L+ Y
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 125 VHNGRIEEACRLFD---------SKSDWELISWNCLMGGFVK-----RKMLGAARK--LF 168
G EE ++ +++ L+ +C G +K R+++G K L
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLE 175
Query: 169 DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA-- 226
K+ V N++IS G++ A +FDQ +D +W ++ + Y QNG ++E+
Sbjct: 176 SKLAVE-----NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 227 -----RTFFDQMPQKNEISYNAMVAGYVQSNKMD------MARELFEAMPSRNVSSWNTM 275
R F D++ +S V G+V K + + F+++ V NT+
Sbjct: 231 IFSLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV----VCVCNTL 285
Query: 276 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 335
+ Y G +A +F MP +D +SW ++++ + G +AL + + G+S+N
Sbjct: 286 LRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 345
Query: 336 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 395
TF+ AL+ C E G+ +HG VV +G +GNAL+ MY K G + E+ V
Sbjct: 346 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 405
Query: 396 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG-LIDR 454
+ +DVV+WN +I GYA +AL F++M+ GV + IT+V VLSAC G L++R
Sbjct: 406 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 465
Query: 455 GTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 513
G + Y ++ + K+ +I + + G L +QDL + +W A+L A
Sbjct: 466 GKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 522
Query: 514 SRIHGNTELGEKAAEMVFKM 533
+ HG+ GE+ ++V KM
Sbjct: 523 NAHHGH---GEEVLKLVSKM 539
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/604 (37%), Positives = 379/604 (62%), Gaps = 20/604 (3%)
Query: 37 FSLARDLFD-----KMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLS 91
F+L R ++ ++PQ + + + G ++ +AR+LFD +P++DVV+W +++
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVG-----KIAEARKLFDGLPERDVVTWTHVIT 85
Query: 92 GYAQNGYADEAREVFYQM-PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNC 150
GY + G EARE+F ++ KN ++W +++ Y+ + ++ A LF + ++SWN
Sbjct: 86 GYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNT 145
Query: 151 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW 210
++ G+ + + A +LFD+M R++VSWN+M+ Q G + +A NLF++ P +DV +W
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSW 205
Query: 211 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 270
TAMV G +NG +DEAR FD MP++N IS+NAM+ GY Q+N++D A +LF+ MP R+ +
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFA 265
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
SWNTMITG+ +N ++ +A LFD MP+++ +SW +I+GY + EEALN+F ++ RDG
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 331 E-SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 389
N T+ LS C+D+A L G+QIH + K+ ++ V +ALL MY K G + A
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA 385
Query: 390 NDVFEG--IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
+F+ + ++D++SWN+MIA YA HG GK+A+ ++ M+ G KP +T + +L ACS
Sbjct: 386 RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS 445
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 507
HAGL+++G E+F + +D S+ +HYTC++DL GRAGRL++ + + + +
Sbjct: 446 HAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFY 505
Query: 508 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 567
GA+L A +H + ++ + V + ++G YVL+SN+YAA+G+ +A MR +M++
Sbjct: 506 GAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEK 565
Query: 568 GVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDV 627
G++K G SWV+V + H F VGD HP+ + + + L +L KMR+ V+S D
Sbjct: 566 GLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNVTS------DA 619
Query: 628 EEEE 631
EE E
Sbjct: 620 EEAE 623
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 231/403 (57%), Gaps = 43/403 (10%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR-DLVSWNVMLTGY 62
G A ++F+ +P R V++ +I+GY++ AR+LFD++ R ++V+W M++GY
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 63 VRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA 122
+R+++L A LF MP+++VVSWN M+ GYAQ+G D+A E+F +MP +N +SWN ++
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 123 AYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 182
A V GRI+EA LF+ +++SW ++ G K + AR+LFD M R+++SWN M
Sbjct: 180 ALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAM 239
Query: 183 ISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYN 242
I+GYAQ+ + +A LF P +D +W M++G+++N +++A FD+MP+KN IS+
Sbjct: 240 ITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWT 299
Query: 243 AMVAGYVQSNKMDMARELFEAM-----------------------------------PSR 267
M+ GYV++ + + A +F M S+
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 268 NVSSWNTMITG-----YGQNGDIAQARKLFD--MMPQRDCVSWAAIISGYAQTGHYEEAL 320
+V N ++T Y ++G++ ARK+FD ++ QRD +SW ++I+ YA GH +EA+
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 321 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 363
M+ ++++ G + T+ L C+ +E G + +V+
Sbjct: 420 EMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 208/368 (56%), Gaps = 16/368 (4%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
+R+ A +F MP R+ VS+N MI GY ++ R A +LFD+MP+R++VSWN M+
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 61 GYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGL 120
V+ R+ +A LF+ MP++DVVSW AM+ G A+NG DEAR +F MP +N ISWN +
Sbjct: 180 ALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAM 239
Query: 121 LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN 180
+ Y N RI+EA +LF + + SWN ++ GF++ + + A LFD+M ++V+SW
Sbjct: 240 ITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWT 299
Query: 181 TMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP- 234
TMI+GY ++ + +A N+F D S +V T+ +++S L E + +
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 235 ---QKNEISYNAMVAGYVQSNKMDMARELFE--AMPSRNVSSWNTMITGYGQNGDIAQAR 289
QKNEI +A++ Y +S ++ AR++F+ + R++ SWN+MI Y +G +A
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 290 KLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALST 344
++++ M + V++ ++ + G E+ + F ++ RD L ++C +
Sbjct: 420 EMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDL 479
Query: 345 CADIAALE 352
C L+
Sbjct: 480 CGRAGRLK 487
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 275/816 (33%), Positives = 423/816 (51%), Gaps = 144/816 (17%)
Query: 26 AMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR---NRRLGDARRLFDSM---P 79
A+++ YL+ + + LF++MP RD+V WN+ML Y+ D F S P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 80 QKDVVSWNAMLSG----------YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGR 129
+ + A +SG +A A E+ ++ N L+ Y+H+G+
Sbjct: 245 NEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFR---------NKGLSEYLHSGQ 295
Query: 130 IEEACRLF-------------------------DSKS--------------DWELISWNC 150
+ F DS + D L N
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355
Query: 151 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------SPH 204
L+ + K + G AR +FD M RD++SWN++I+G AQ+G +A LF Q P
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 205 Q----------------------------------DVFTWTAMVSGYVQNGMLDEARTFF 230
Q D F TA++ Y +N + EA F
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 231 DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----------------------- 267
++ + +++NAM+AGY QS+ +LF M +
Sbjct: 476 ER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 268 --------------NVSSWNT--MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYA 311
++ W + ++ Y + GD++ A+ FD +P D V+W +ISG
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Query: 312 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 371
+ G E A ++F +++ G + T + + + ALE G+QIH +K F
Sbjct: 595 ENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPF 654
Query: 372 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 431
VG +L+ MY KCGSI +A +F+ IE ++ +WN M+ G A+HG GK+ L +F+ MK++G
Sbjct: 655 VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG 714
Query: 432 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 491
+KPD++T +GVLSACSH+GL+ ++ SM+ DY + P +HY+C+ D LGRAG +++A
Sbjct: 715 IKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQA 774
Query: 492 QDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 551
++L+ +M E A+ + LL A R+ G+TE G++ A + ++EP +S YVLLSN+YAA+
Sbjct: 775 ENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAA 834
Query: 552 GRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKM 611
+W + R+ M+ V+K G+SW+EV+NKIH F V D + + + IY ++++ +
Sbjct: 835 SKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDI 894
Query: 612 RREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCH 671
++EGYV T L DVEEEEKE L YHSEKLAVAFG+L+ P PIRVIKNLRVC DCH
Sbjct: 895 KQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCH 954
Query: 672 NAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
NA+K+I+K+ R I+LRD++RFH F +GICSCGDYW
Sbjct: 955 NAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/551 (24%), Positives = 247/551 (44%), Gaps = 41/551 (7%)
Query: 4 GHCDSA-LRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGY 62
G C A + F P R + N +IS Y + + AR +FDKMP RDLVSWN +L Y
Sbjct: 58 GKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 63 VRN-----RRLGDARRLFDSMPQKDVV-----SWNAMLSGYAQNGYADEAREVFYQMPHK 112
++ + A LF + Q DVV + + ML +GY A E F+ K
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQ-DVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACK 173
Query: 113 NAISWNGLLAA-----YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKL 167
+ + +A Y+ G+++E LF+ +++ WN ++ +++ A L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 168 FDKMHVRDV----VSWNTMISGYAQDGDMSQAKNLF---DQSPHQDVFTWTAMVSGYVQN 220
H + ++ + D D Q K+ D S ++ +S Y+ +
Sbjct: 234 SSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHS 293
Query: 221 GMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSW 272
G F M + +++++ M+A V+ + + + +++ + ++
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
N++I Y + AR +FD M +RD +SW ++I+G AQ G EA+ +F+++ R G
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 333 LNRSTFSCALSTCADIA-ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
++ T + L + + L L KQ+H +K + FV AL+ Y + + EA
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 392 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
+FE D+V+WN M+AGY + G + L +F M G + D+ T+ V C
Sbjct: 474 LFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 532
Query: 452 IDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 510
I++G + + Y++ Y + + ++D+ + G + AQ ++P P +W +
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTM 589
Query: 511 LGASRIHGNTE 521
+ +G E
Sbjct: 590 ISGCIENGEEE 600
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%)
Query: 242 NAMVAGYVQSNKMDMAREL-FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 300
NA+ + + K AR L FE P R + N +I+ Y + G + AR++FD MP RD
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFL--INNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 301 VSWAAIISGYAQTG-----HYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
VSW +I++ YAQ+ + ++A +F +++D +R T S L C + +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 415
HG K G + FV AL+ +Y K G + E +FE + +DVV WN M+ Y G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 416 FGKQALMVFESMKTIGVKPDEITM 439
F ++A+ + + + G+ P+EIT+
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITL 249
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 261/736 (35%), Positives = 394/736 (53%), Gaps = 87/736 (11%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA--I 115
+++ + R + +A R+F+ + K V ++ ML G+A+ D+A + F +M + + +
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 116 SWNGLLAAYVHNGRIEEAC------RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 169
+N V E L S +L + L + K + + ARK+FD
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 170 KMHVRDVVSWNTMISGYAQDG----DMSQAKNLFDQSPHQDVFTW--------------- 210
+M RD+VSWNT+++GY+Q+G + K++ +++ T
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 211 --------------------TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQ 250
TA+V Y + G L+ AR FD M ++N +S+N+M+ YVQ
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 251 SNKMDMARELFEAM------PS---------------------------------RNVSS 271
+ A +F+ M P+ RNVS
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 331
N++I+ Y + ++ A +F + R VSW A+I G+AQ G +ALN F +++
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
+ T+ ++ A+++ K IHG V+++ + FV AL+ MY KCG+I A
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 392 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
+F+ + E+ V +WN MI GY HGFGK AL +FE M+ +KP+ +T + V+SACSH+GL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
++ G + FY M ++YS+ S HY M+DLLGRAGRL EA D + MP +P +GA+L
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614
Query: 512 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 571
GA +IH N EKAAE +F++ P + G +VLL+N+Y A+ W G +R M G++K
Sbjct: 615 GACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRK 674
Query: 572 VTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEE 631
G S VE++N++H F G HP+ +IYAFLE+L ++ GYV T LVL VE +
Sbjct: 675 TPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDV 733
Query: 632 KEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSH 691
KE +L HSEKLA++FG+L AG I V KNLRVC DCHNA K+IS + GR I++RD
Sbjct: 734 KEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQ 793
Query: 692 RFHHFNEGICSCGDYW 707
RFHHF G CSCGDYW
Sbjct: 794 RFHHFKNGACSCGDYW 809
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
L C+ + L +QI V K G F L+ ++ + GS+ EA VFE I+ K
Sbjct: 44 LERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 402 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYS 461
V ++TM+ G+A+ +AL F M+ V+P +L C + G E
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 462 MNKD-YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 520
+ K +S+ + T + ++ + ++ EA+ + MP E SW ++ +G
Sbjct: 161 LVKSGFSLDLFA--MTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAGYSQNG-- 215
Query: 521 ELGEKAAEMVFKMEPHN 537
+ A EMV M N
Sbjct: 216 -MARMALEMVKSMCEEN 231
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/656 (37%), Positives = 366/656 (55%), Gaps = 19/656 (2%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM-------PHKNAISWNGLLAA 123
AR++FD +P+ + +WN ++ YA + F M P+K + AA
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 124 YVHNGRIEEACRLFDSKSDW--ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 181
V + + ++ KS ++ N L+ + L +A K+F + +DVVSWN+
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQK- 236
MI+G+ Q G +A LF + +DV T ++S + L+ R + +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 237 ---NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFD 293
N NAM+ Y + ++ A+ LF+AM ++ +W TM+ GY + D AR++ +
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 294 MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK-RDGESLNRSTFSCALSTCADIAALE 352
MPQ+D V+W A+IS Y Q G EAL +F E++ + LN+ T LS CA + ALE
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 353 LGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYA 412
LG+ IH + K G V +AL+ MY KCG + ++ +VF +E++DV W+ MI G A
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 413 RHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSS 472
HG G +A+ +F M+ VKP+ +T V ACSH GL+D F+ M +Y + P
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 473 KHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFK 532
KHY C++D+LGR+G LE+A + MP P + WGALLGA +IH N L E A + +
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 533 MEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDC 592
+EP N G +VLLSN+YA G+W + +R MR G++K G S +E+ IH+F GD
Sbjct: 563 LEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDN 622
Query: 593 FHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEE-KEHMLKYHSEKLAVAFGILT 651
HP +++Y L E+ K++ GY VL +EEEE KE L HSEKLA+ +G+++
Sbjct: 623 AHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIS 682
Query: 652 IPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
A + IRVIKNLRVC DCH+ K IS++ R II+RD +RFHHF G CSC D+W
Sbjct: 683 TEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 193/403 (47%), Gaps = 47/403 (11%)
Query: 190 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN-GMLDEARTFFDQMPQK----NEISYNAM 244
+ A+ +FD+ P + F W ++ Y + F D + + N+ ++ +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 245 VAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 300
+ + + + + + L ++ +V N++I Y GD+ A K+F + ++D
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 360
VSW ++I+G+ Q G ++AL +F +++ + + T LS CA I LE G+Q+
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 361 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYA-------- 412
+ + + NA+L MY KCGSI +A +F+ +EEKD V+W TM+ GYA
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 413 -----------------------RHGFGKQALMVFESMK-TIGVKPDEITMVGVLSACSH 448
++G +AL+VF ++ +K ++IT+V LSAC+
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 449 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 508
G ++ G + +S K + + + + +I + + G LE+++++ ++ + W
Sbjct: 378 VGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWS 435
Query: 509 ALLGASRIHGNTELGEKAAEMVFKMEPHNSGMY-VLLSNLYAA 550
A++G +HG G +A +M +KM+ N V +N++ A
Sbjct: 436 AMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 168/328 (51%), Gaps = 17/328 (5%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
D+ N ++ Y L A ++F ++ +KDVVSWN+M++G+ Q G D+A E+F +M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 111 HKNA----ISWNGLLAAYVHNGRIE---EACRLF-DSKSDWELISWNCLMGGFVKRKMLG 162
++ ++ G+L+A +E + C +++ + L N ++ + K +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 163 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGM 222
A++LFD M +D V+W TM+ GYA D A+ + + P +D+ W A++S Y QNG
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 223 LDEARTFFDQMP-QK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWN 273
+EA F ++ QK N+I+ + ++ Q +++ R + + N +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 274 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 333
+I Y + GD+ ++R++F+ + +RD W+A+I G A G EA++MF +++
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQV 361
N TF+ C+ ++ + + Q+
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQM 492
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 187/430 (43%), Gaps = 67/430 (15%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGY- 62
G DSA +VF T+ + VS+N+MI+G+++ A +LF KM D+ + +V + G
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 63 -----VRNRRLG---------------------------------DARRLFDSMPQKDVV 84
+RN G DA+RLFD+M +KD V
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 299
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 144
+W ML GYA + + AREV MP K+ ++WN L++AY NG+ EA +F +
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359
Query: 145 LISWN--CLMGGFVKRKMLGAAR------KLFDKMHVR-DVVSWNTMISGYAQDGDMSQA 195
+ N L+ +GA K +R + + +I Y++ GD+ ++
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 196 KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQS 251
+ +F+ +DVF W+AM+ G +G +EA F +M + N +++ + +
Sbjct: 420 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 479
Query: 252 NKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVS-WAA 305
+D A LF M S + ++ G++G + +A K + MP S W A
Sbjct: 480 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGA 539
Query: 306 IISG---YAQTGHYEEALNMFIEI--KRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 360
++ +A E A +E+ + DG + S L +++ L + H +
Sbjct: 540 LLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSEL----RKHMR 595
Query: 361 VVKTGYETGC 370
V E GC
Sbjct: 596 VTGLKKEPGC 605
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 159/327 (48%), Gaps = 23/327 (7%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV- 83
N++I Y A +F + ++D+VSWN M+ G+V+ A LF M +DV
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 84 ---VSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRL 136
V+ +LS A+ + R+V + N N +L Y G IE+A RL
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 137 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 196
FD+ + + ++W ++ G+ + AAR++ + M +D+V+WN +IS Y Q+G ++A
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 197 NLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYN-----AMVA 246
+F + Q + T + +S Q G L+ R + +K+ I N A++
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIH 408
Query: 247 GYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC----VS 302
Y + ++ +RE+F ++ R+V W+ MI G +G +A +F M + + V+
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
Query: 303 WAAIISGYAQTGHYEEALNMFIEIKRD 329
+ + + TG +EA ++F +++ +
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQMESN 495
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 261/678 (38%), Positives = 376/678 (55%), Gaps = 53/678 (7%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------ 109
N ++ Y + +L ++ L S +D+V+WN +LS QN EA E +M
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 110 PHKNAISWNGLLAAYVH-----NGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 164
P + IS +L A H G+ A L + D + L+ + K + +
Sbjct: 300 PDEFTIS--SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 165 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLD 224
R++FD M R + WN MI+GY+Q+ +A LF + G+L
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF--------------IGMEESAGLLA 403
Query: 225 EARTFFDQMP---QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQ 281
+ T +P + S + G+V +D R+ NT++ Y +
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD-----------RDRFVQNTLMDMYSR 452
Query: 282 NGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK-----------RDG 330
G I A ++F M RD V+W +I+GY + H+E+AL + +++ R
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 331 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 390
N T L +CA ++AL GK+IH +K T VG+AL+ MY KCG + +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 391 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 450
VF+ I +K+V++WN +I Y HG G++A+ + M GVKP+E+T + V +ACSH+G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 451 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE-PPAASWGA 509
++D G FY M DY V PSS HY C++DLLGRAGR++EA LM MP + A +W +
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 510 LLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 569
LLGASRIH N E+GE AA+ + ++EP+ + YVLL+N+Y+++G W A +R M++ GV
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 570 QKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEE 629
+K G SW+E +++HKF GD HP+ +++ +LE L +MR+EGYV T VLH+VEE
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Query: 630 EEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRD 689
+EKE +L HSEKLA+AFGIL G IRV KNLRVC DCH A K ISKIV R IILRD
Sbjct: 813 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 690 SHRFHHFNEGICSCGDYW 707
RFH F G CSCGDYW
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 224/510 (43%), Gaps = 69/510 (13%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
N ++ Y + G ++FD + +++ VSWN+++S + A E F M +N
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 116 SWNGLLAAYV---HNGRIEEACRLFDSKSDW-----ELISW--NCLMGGFVKRKMLGAAR 165
+ L + V N + E + + EL S+ N L+ + K L +++
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 166 KLFDKMHVRDVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNG 221
L RD+V+WNT++S Q+ + +A + + + D FT ++++
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 222 MLDEARTFFDQMPQKNEISYN-----AMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMI 276
ML + + + N A+V Y ++ R +F+ M R + WN MI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 277 TGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL-NR 335
GY QN H +EAL +FI ++ L N
Sbjct: 377 AGYSQN-------------------------------EHDKEALLLFIGMEESAGLLANS 405
Query: 336 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 395
+T + + C A + IHG VVK G + FV N L+ MY + G I A +F
Sbjct: 406 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 465
Query: 396 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT-----------IGVKPDEITMVGVLS 444
+E++D+V+WNTMI GY + AL++ M+ + +KP+ IT++ +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 445 ACSHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 503
+C+ + +G E + Y++ + + + + ++D+ + G L+ ++ + +P +
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQIP-QKN 582
Query: 504 AASWGALLGASRIHGNTELGEKAAEMVFKM 533
+W ++ A +HGN G++A +++ M
Sbjct: 583 VITWNVIIMAYGMHGN---GQEAIDLLRMM 609
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 160/346 (46%), Gaps = 29/346 (8%)
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
V V NT+++ Y + GD +FD+ ++ +W +++S + A F
Sbjct: 130 VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 189
Query: 233 MPQKN-EISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW------------NTMITGY 279
M +N E S +V+ + + M L M + V ++ NT++ Y
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMPEGL---MMGKQVHAYGLRKGELNSFIINTLVAMY 246
Query: 280 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 339
G+ G +A ++ L RD V+W ++S Q EAL E+ +G + T S
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 340 CALSTCADIAALELGKQIHGQVVKTG-YETGCFVGNALLGMYFKCGSIGEANDVFEGIEE 398
L C+ + L GK++H +K G + FVG+AL+ MY C + VF+G+ +
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 399 KDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDR--- 454
+ + WN MIAGY+++ K+AL++F M ++ G+ + TM GV+ AC +G R
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 455 --GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
G +++D V + ++D+ R G+++ A + M
Sbjct: 427 IHGFVVKRGLDRDRFVQNT------LMDMYSRLGKIDIAMRIFGKM 466
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 149/315 (47%), Gaps = 14/315 (4%)
Query: 210 WTAMVSGYVQNGMLDEA-RTFFDQMP---QKNEISYNAMVAGYVQSNKMDMARELFEAMP 265
W ++ V++ +L EA T+ D + + + ++ A++ M++ +++ +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 266 S-----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 320
+V+ NT++ Y + GD K+FD + +R+ VSW ++IS +E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 321 NMFIEIKRDGESLNRSTFSCALSTCADIA---ALELGKQIHGQVVKTGYETGCFVGNALL 377
F + + + T ++ C+++ L +GKQ+H ++ G E F+ N L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
MY K G + + + +D+V+WNT+++ ++ +AL M GV+PDE
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
T+ VL ACSH ++ G E K+ S+ +S + ++D+ ++ + +
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 498 MPFEPPAASWGALLG 512
M F+ W A++
Sbjct: 364 M-FDRKIGLWNAMIA 377
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 112/523 (21%), Positives = 211/523 (40%), Gaps = 86/523 (16%)
Query: 20 SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM- 78
+S N +++ Y + + + ++ L RDLV+WN +L+ +N +L +A M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 79 -----PQKDVVS-------------WNAMLSGYA-QNGYADE------------------ 101
P + +S L YA +NG DE
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 102 --AREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE-LISWNCLMGGFVKR 158
R VF M + WN ++A Y N +EA LF + L++ + M G V
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 159 KMLGAARKLFDKMH--------VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW 210
+ A + +H RD NT++ Y++ G + A +F + +D+ TW
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 211 TAMVSGYVQNGMLDEARTFFDQMP---------------QKNEISYNAMVAGYVQSNKMD 255
M++GYV + ++A +M + N I+ ++ + +
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 256 MARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYA 311
+E+ N V+ + ++ Y + G + +RK+FD +PQ++ ++W II Y
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 312 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET--- 368
G+ +EA+++ + G N TF + C+ ++ G +I V+K Y
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPS 653
Query: 369 ----GCFVGNALLGMYFKCGSIGEANDVFEGIEE--KDVVSWNTMIAGYARHGFGKQALM 422
C V LLG + G I EA + + +W++++ H + +
Sbjct: 654 SDHYACVVD--LLG---RAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEI 708
Query: 423 VFESMKTIGVKPDEITMVGVLSAC-SHAGLIDRGTEYFYSMNK 464
+++ I ++P+ + +L+ S AGL D+ TE +M +
Sbjct: 709 AAQNL--IQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKE 749
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 181/449 (40%), Gaps = 73/449 (16%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 81
+A++ Y + R +FD M R + WN M+ GY +N +A LF M +
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 82 --DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS-----WNGLLAAYVHNGRIEEAC 134
+ + ++ ++G A +E + K + N L+ Y G+I+ A
Sbjct: 402 LANSTTMAGVVPACVRSG-AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 135 RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH--VRDV-------------VSW 179
R+F D +L++WN ++ G+V + A L KM R V ++
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 180 NTMISGYAQDGDMSQAKNL----FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
T++ A +++ K + + DV +A+V Y + G L +R FDQ+PQ
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580
Query: 236 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 295
KN I +WN +I YG +G+ +A L MM
Sbjct: 581 KNVI-------------------------------TWNVIIMAYGMHGNGQEAIDLLRMM 609
Query: 296 ----PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD-GESLNRSTFSCALSTCADIAA 350
+ + V++ ++ + + +G +E L +F +K D G + ++C +
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669
Query: 351 LELGKQIHGQVVKTGYETGC---FVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 407
++ Q+ + + + G +G + + + G I N + E +V S +
Sbjct: 670 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI---QLEPNVASHYVL 726
Query: 408 IAG-YARHGFGKQALMVFESMKTIGVKPD 435
+A Y+ G +A V +MK GV+ +
Sbjct: 727 LANIYSSAGLWDKATEVRRNMKEQGVRKE 755
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/716 (35%), Positives = 396/716 (55%), Gaps = 47/716 (6%)
Query: 12 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR------N 65
V ++P + S++++I + F+ + +F +M L+ + +L +
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 66 RRLGDARRLFDSMPQKDVVSW--NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAA 123
++G + D+ ++ +M Y + G +AR+VF +M K+ ++ + LL A
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 124 YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMI 183
Y G +EE R+ S+ + I N +VSWN ++
Sbjct: 192 YARKGCLEEVVRIL-SEMESSGIEAN--------------------------IVSWNGIL 224
Query: 184 SGYAQDGDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQNGMLDEARTF----FDQMPQ 235
SG+ + G +A +F + H D T ++++ + ML+ R Q
Sbjct: 225 SGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLL 284
Query: 236 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 295
K++ +AM+ Y +S + LF N ITG +NG + +A ++F++
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELF 344
Query: 296 PQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
++ + VSW +II+G AQ G EAL +F E++ G N T L C +IAAL
Sbjct: 345 KEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAAL 404
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
G+ HG V+ VG+AL+ MY KCG I + VF + K++V WN+++ G+
Sbjct: 405 GHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGF 464
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
+ HG K+ + +FES+ +KPD I+ +LSAC GL D G +YF M+++Y + P
Sbjct: 465 SMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPR 524
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 531
+HY+CM++LLGRAG+L+EA DL++ MPFEP + WGALL + R+ N +L E AAE +F
Sbjct: 525 LEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLF 584
Query: 532 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD 591
+EP N G YVLLSN+YAA G W + ++R++M +G++K G SW++V+N+++ GD
Sbjct: 585 HLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGD 644
Query: 592 CFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILT 651
HP+ D+I ++E+ +MR+ G+ + LHDVEE+E+E ML HSEKLAV FG+L
Sbjct: 645 KSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLN 704
Query: 652 IPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
P G P++VIKNLR+C DCH IK IS GR I +RD++RFHHF +GICSCGD+W
Sbjct: 705 TPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 120/290 (41%), Gaps = 40/290 (13%)
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
+I Y A + +P S++++I + + +++ +F + G +
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
CA+++A ++GKQIH +G + FV ++ MY +CG +G+A VF+
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 395 GIEEKDV-----------------------------------VSWNTMIAGYARHGFGKQ 419
+ +KDV VSWN +++G+ R G+ K+
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 420 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 479
A+++F+ + +G PD++T+ VL + + +++ G + + + MI
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG-RLIHGYVIKQGLLKDKCVISAMI 294
Query: 480 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 529
D+ G++G + L + G SR L +KA EM
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR----NGLVDKALEM 340
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 158/351 (45%), Gaps = 28/351 (7%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWN 56
MR G A +VF+ M + V+ +A++ Y R + +M + ++VSWN
Sbjct: 162 MRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWN 221
Query: 57 VMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAR----EVFYQ 108
+L+G+ R+ +A +F + D V+ +++L + + R V Q
Sbjct: 222 GILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQ 281
Query: 109 MPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLF 168
K+ + ++ Y +G + LF+ E N + G + ++ A ++F
Sbjct: 282 GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMF 341
Query: 169 DKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQN 220
+ + +VVSW ++I+G AQ+G +A LF + V T +M+
Sbjct: 342 ELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNI 401
Query: 221 GMLDEART---FFDQMPQKNEISY-NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMI 276
L R+ F ++ + + +A++ Y + ++++++ +F MP++N+ WN+++
Sbjct: 402 AALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLM 461
Query: 277 TGYGQNGDIAQARKLFD-MMPQR---DCVSWAAIISGYAQTGHYEEALNMF 323
G+ +G + +F+ +M R D +S+ +++S Q G +E F
Sbjct: 462 NGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 137/340 (40%), Gaps = 50/340 (14%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNV 57
++GH + +FN + NA I+G RN A ++F+ ++ ++VSW
Sbjct: 299 KSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTS 358
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREV--FYQMPH 111
++ G +N + +A LF M V V+ +ML R F H
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 112 --KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 169
N + L+ Y GRI + +F+ L+ WN LM GF M G A+++
Sbjct: 419 LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGF---SMHGKAKEV-- 473
Query: 170 KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF 229
MS ++L D ++T+++S Q G+ DE +
Sbjct: 474 ----------------------MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 230 FDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITG--YGQ 281
F M ++ I Y+ MV ++ K+ A +L + MP S W ++
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 282 NGDIAQ--ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
N D+A+ A KLF + P+ ++ + + YA G + E
Sbjct: 572 NVDLAEIAAEKLFHLEPENPG-TYVLLSNIYAAKGMWTEV 610
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/732 (34%), Positives = 413/732 (56%), Gaps = 31/732 (4%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM----PQRDLVSWNVML 59
G A RVF+ + ++ +N +++ ++ FS + LF KM + D +++ +
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 60 TGYVRNRRLGDARRLF-----DSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA 114
+ R + +L +++ V N++++ Y +N D AR+VF +M ++
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 115 ISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKL--- 167
ISWN ++ YV NG E+ +F S + +L + + G +++ R +
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 168 -FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA 226
R+ NT++ Y++ GD+ AK +F + + V ++T+M++GY + G+ EA
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 227 RTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITG 278
F++M ++ + + A++ + +D + + E + ++ N ++
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF---IEIKRDGESLNR 335
Y + G + +A +F M +D +SW II GY++ + EAL++F +E KR S +
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR--FSPDE 499
Query: 336 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 395
T +C L CA ++A + G++IHG +++ GY + V N+L+ MY KCG++ A+ +F+
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD 559
Query: 396 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
I KD+VSW MIAGY HGFGK+A+ +F M+ G++ DEI+ V +L ACSH+GL+D G
Sbjct: 560 IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 456 TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASR 515
+F M + + P+ +HY C++D+L R G L +A + NMP P A WGALL R
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679
Query: 516 IHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGY 575
IH + +L EK AE VF++EP N+G YVL++N+YA + +W +R R+ G++K G
Sbjct: 680 IHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGC 739
Query: 576 SWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHM 635
SW+E++ +++ F GD +PE + I AFL ++ +M EGY TK L D EE EKE
Sbjct: 740 SWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEA 799
Query: 636 LKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHH 695
L HSEKLA+A GI++ G+ IRV KNLRVC DCH K +SK+ R I+LRDS+RFH
Sbjct: 800 LCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQ 859
Query: 696 FNEGICSCGDYW 707
F +G CSC +W
Sbjct: 860 FKDGHCSCRGFW 871
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 187/448 (41%), Gaps = 94/448 (20%)
Query: 118 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 177
N L + +G +E A +L W+ I L ++ ++ L D V + +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWD-IDPRTLCSVL---QLCADSKSLKDGKEVDNFI 120
Query: 178 SWNTMISG----------YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
N + Y GD+ +A +FD+ + W +++ ++G +
Sbjct: 121 RGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSI 180
Query: 228 TFFDQM----------------------------------------PQKNEISYNAMVAG 247
F +M ++N + N++VA
Sbjct: 181 GLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAF 239
Query: 248 YVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAII 307
Y+++ ++D AR++F+ M R+V SWN++I GY N
Sbjct: 240 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN------------------------- 274
Query: 308 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 367
G E+ L++F+++ G ++ +T + CAD + LG+ +H VK +
Sbjct: 275 ------GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 368 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 427
N LL MY KCG + A VF + ++ VVS+ +MIAGYAR G +A+ +FE M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 428 KTIGVKPDEITMVGVLSACSHAGLIDRGT---EYFYSMNKDYSVTPSSKHYTCMIDLLGR 484
+ G+ PD T+ VL+ C+ L+D G E+ + + + S+ ++D+ +
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA----LMDMYAK 444
Query: 485 AGRLEEAQDLMRNMPFEPPAASWGALLG 512
G ++EA+ + M + SW ++G
Sbjct: 445 CGSMQEAELVFSEMRVK-DIISWNTIIG 471
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 177/374 (47%), Gaps = 31/374 (8%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM----PQRDLVSWN 56
++N DSA +VF+ M R +S+N++I+GY+ N +F +M + DL +
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 57 VMLTGYVRNRRLGDARRLFDSMPQKDVVS-----WNAMLSGYAQNGYADEAREVFYQMPH 111
+ G + RL R S+ K S N +L Y++ G D A+ VF +M
Sbjct: 301 SVFAG-CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKL 167
++ +S+ ++A Y G EA +LF+ + ++ + ++ + ++L +++
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 419
Query: 168 FDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 223
+ + D+ N ++ YA+ G M +A+ +F + +D+ +W ++ GY +N
Sbjct: 420 HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 479
Query: 224 DEARTFFDQMPQKNEISYNAMVAGYV-----QSNKMDMARELFEAM------PSRNVSSW 272
+EA + F+ + ++ S + V + D RE+ + R+V+
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA-- 537
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
N+++ Y + G + A LFD + +D VSW +I+GY G +EA+ +F ++++ G
Sbjct: 538 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 333 LNRSTFSCALSTCA 346
+ +F L C+
Sbjct: 598 ADEISFVSLLYACS 611
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 145/370 (39%), Gaps = 64/370 (17%)
Query: 232 QMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPS-----RNVSSWNTMITGYGQNGDIA 286
+ + EI V YV N+ + R + + + S R+V+ NT + + ++G++
Sbjct: 20 HLQNQKEIRSGVRVRKYVIFNRASL-RTVSDCVDSITTFDRSVTDANTQLRRFCESGNLE 78
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
A KL CVS G ++ ++ T L CA
Sbjct: 79 NAVKLL-------CVS-----------GKWD---------------IDPRTLCSVLQLCA 105
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 406
D +L+ GK++ + G+ +G+ L MY CG + EA+ VF+ ++ + + WN
Sbjct: 106 DSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNI 165
Query: 407 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 466
++ A+ G ++ +F+ M + GV+ D T V + S + G E +
Sbjct: 166 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV-HGGEQLHGFILKS 224
Query: 467 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 526
+ ++ + R++ A+ + M E SW +++ +G L EK
Sbjct: 225 GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIINGYVSNG---LAEKG 280
Query: 527 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHK 586
+ +M SG+ + L+ + + AD SR+ +G +H
Sbjct: 281 LSVFVQMLV--SGIEIDLATIVSVFAGCAD-----SRLISLG-------------RAVHS 320
Query: 587 FTVGDCFHPE 596
V CF E
Sbjct: 321 IGVKACFSRE 330
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/620 (39%), Positives = 361/620 (58%), Gaps = 25/620 (4%)
Query: 113 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRKMLGAARKLF 168
+ SWN ++A +G EA F S L S+ C + + + ++
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 169 DKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG-ML 223
+ V D+ + +I Y+ G + A+ +FD+ P +++ +WT+M+ GY NG L
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 224 DEARTFFDQMPQKNE----ISYNAM-VAGYVQSNKMDMARELFEAMPS--------RNVS 270
D F D + +N+ + ++M + + + A+ L E++ S R VS
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 271 SWNTMITGYGQNGD--IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE-IK 327
NT++ Y + G+ +A ARK+FD + +D VS+ +I+S YAQ+G EA +F +K
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 387
+ N T S L + AL +GK IH QV++ G E VG +++ MY KCG +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 388 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
A F+ ++ K+V SW MIAGY HG +AL +F +M GV+P+ IT V VL+ACS
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 507
HAGL G +F +M + V P +HY CM+DLLGRAG L++A DL++ M +P + W
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 508 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 567
+LL A RIH N EL E + +F+++ N G Y+LLS++YA +GRW D +R M++
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 568 GVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDV 627
G+ K G+S +E+ ++H F +GD HP++++IY FL EL+ K+ GYVS+T V HDV
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDV 579
Query: 628 EEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIIL 687
+EEEKE L+ HSEKLA+AFGI+ G + V+KNLRVC DCHN IK ISKIV R ++
Sbjct: 580 DEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVV 639
Query: 688 RDSHRFHHFNEGICSCGDYW 707
RD+ RFHHF +G CSCGDYW
Sbjct: 640 RDAKRFHHFKDGGCSCGDYW 659
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 29/308 (9%)
Query: 49 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 108
Q D+ + ++ Y +L DAR++FD +P++++VSW +M+ GY NG A +A +F
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKD 167
Query: 109 MPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGF-----VKRKMLGA 163
+ + + + + AC +K E I + GF V +L A
Sbjct: 168 LLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDA 227
Query: 164 -----------ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 212
ARK+FD++ +D VS+N+++S YAQ G ++A +F + V T+ A
Sbjct: 228 YAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNA 287
Query: 213 MVSGYV-----QNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEA 263
+ V +G L + DQ+ + + I +++ Y + +++ AR+ F+
Sbjct: 288 ITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDR 347
Query: 264 MPSRNVSSWNTMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAIISGYAQTGHYEEA 319
M ++NV SW MI GYG +G A+A +LF M + + +++ ++++ + G + E
Sbjct: 348 MKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEG 407
Query: 320 LNMFIEIK 327
F +K
Sbjct: 408 WRWFNAMK 415
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 161/381 (42%), Gaps = 42/381 (11%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLF--------- 75
+A+I Y + AR +FD++P+R++VSW M+ GY N DA LF
Sbjct: 115 SALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEND 174
Query: 76 -------DSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW-NGLLAAYVHN 127
DSM V+S S G + + +S N LL AY
Sbjct: 175 DDDAMFLDSMGLVSVIS---ACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKG 231
Query: 128 GR--IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN----- 180
G + A ++FD D + +S+N +M + + M A ++F ++ VV++N
Sbjct: 232 GEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLS 291
Query: 181 TMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 236
T++ + G + K + DQ DV T+++ Y + G ++ AR FD+M K
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK 351
Query: 237 NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLF 292
N S+ AM+AGY A ELF AM V ++ +++ G + + F
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411
Query: 293 DMMPQRDCVS-----WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF--SCALSTC 345
+ M R V + ++ + G ++A ++ +K +S+ S+ +C +
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471
Query: 346 ADIAALELGKQIHGQVVKTGY 366
++A + + + GY
Sbjct: 472 VELAEISVARLFELDSSNCGY 492
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 178/397 (44%), Gaps = 71/397 (17%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNAR----FSLARDLF--------------- 44
G + A +VF+ +P+R+ VS+ +MI GY N SL +DL
Sbjct: 125 GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM 184
Query: 45 ---------DKMPQRDL---VSWNVMLTGYVRNRRLGD----------------ARRLFD 76
++P + L + V+ G+ R +G+ AR++FD
Sbjct: 185 GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFD 244
Query: 77 SMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIE 131
+ KD VS+N+++S YAQ+G ++EA EVF ++ NAI+ + +L A H+G +
Sbjct: 245 QIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR 304
Query: 132 EACRLFDS----KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYA 187
+ D + ++I ++ + K + ARK FD+M ++V SW MI+GY
Sbjct: 305 IGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364
Query: 188 QDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS--- 240
G ++A LF D + T+ ++++ G+ E +F+ M + +
Sbjct: 365 MHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424
Query: 241 --YNAMVAGYVQSNKMDMARELFEAMPSRNVS-SWNTMITG--YGQNGDIAQ--ARKLFD 293
Y MV ++ + A +L + M + S W++++ +N ++A+ +LF+
Sbjct: 425 EHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
Query: 294 MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
+ +C + + YA G +++ + + +K G
Sbjct: 485 -LDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRG 520
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 396 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
+++ DV SWN++IA AR G +AL+ F SM+ + + P + + ACS I G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 456 TE-----YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 510
+ + + D V+ + +I + G+LE+A+ + +P + SW ++
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSA------LIVMYSTCGKLEDARKVFDEIP-KRNIVSWTSM 148
Query: 511 LGASRIHGN 519
+ ++GN
Sbjct: 149 IRGYDLNGN 157
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 258/764 (33%), Positives = 410/764 (53%), Gaps = 87/764 (11%)
Query: 21 SVSYNAMISGYLRNARFSLARDLFDKMP---QRDLVSWNVMLTGYVRNRRLGDARRLFDS 77
SV YN++IS Y ++ + A D+F+ M +RD+VSW+ M+ Y N R DA ++F
Sbjct: 97 SVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE 156
Query: 78 MPQKDVV----SWNAMLSGYAQNGYA---------------------------------- 99
+ +V + A++ + + +
Sbjct: 157 FLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGE 216
Query: 100 ---DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV 156
+ A +VF +M N ++W ++ + G EA R F + ++ GF
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF----------LDMVLSGFE 266
Query: 157 KRK-----MLGAARKLFDKMHVRDVVSWN-----------TMISGYAQ---DGDMSQAKN 197
K + A +L + + + SW +++ YA+ DG + +
Sbjct: 267 SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRK 326
Query: 198 LFDQSPHQDVFTWTAMVSGYVQN-GMLDEARTFFDQMPQKNEISYN--AMVAGYVQSNKM 254
+FD+ V +WTA+++GY++N + EA F +M + + N + + +
Sbjct: 327 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 255 DMAR-------ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAII 307
R + F+ + N S N++I+ + ++ + A++ F+ + +++ VS+ +
Sbjct: 387 SDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFL 446
Query: 308 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 367
G + ++E+A + EI ++ TF+ LS A++ ++ G+QIH QVVK G
Sbjct: 447 DGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLS 506
Query: 368 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 427
V NAL+ MY KCGSI A+ VF +E ++V+SW +MI G+A+HGF + L F M
Sbjct: 507 CNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 428 KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGR 487
GVKP+E+T V +LSACSH GL+ G +F SM +D+ + P +HY CM+DLL RAG
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 488 LEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNL 547
L +A + + MPF+ W LGA R+H NTELG+ AA + +++P+ Y+ LSN+
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNI 686
Query: 548 YAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEEL 607
YA +G+W ++ MR +M++ + K G SW+EV +KIHKF VGD HP +IY L+ L
Sbjct: 687 YACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746
Query: 608 DLKMRREGYVSSTKLVLHDV----EEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKN 663
+++R GYV T LVLH + +E EKE +L HSEK+AVAFG+++ RP+RV KN
Sbjct: 747 ITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKN 806
Query: 664 LRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
LRVC DCHNA+K+IS + GR I+LRD +RFHHF +G CSC DYW
Sbjct: 807 LRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 306 IISGYAQTGHYEEALNMFIEIKRDG-ESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 364
+I + G A++ + RDG ++ TFS L +C LGK +H ++++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 365 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE---EKDVVSWNTMIAGYARHGFGKQAL 421
E + N+L+ +Y K G +A DVFE + ++DVVSW+ M+A Y +G A+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 422 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
VF +G+ P++ V+ ACS++ + G
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG 185
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 122/286 (42%), Gaps = 54/286 (18%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL-VS----------- 54
+ A R F ++ ++ VSYN + G RN F A L ++ +R+L VS
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484
Query: 55 ---------------------------WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWN 87
N +++ Y + + A R+F+ M ++V+SW
Sbjct: 485 ANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWT 544
Query: 88 AMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDS---- 139
+M++G+A++G+A E F QM + N +++ +L+A H G + E R F+S
Sbjct: 545 SMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYED 604
Query: 140 -KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMS---- 193
K ++ + C++ + +L A + + M + DV+ W T + +
Sbjct: 605 HKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKL 664
Query: 194 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 239
A+ + + P++ + + + Y G +E+ +M ++N +
Sbjct: 665 AARKILELDPNEPA-AYIQLSNIYACAGKWEESTEMRRKMKERNLV 709
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/604 (38%), Positives = 355/604 (58%), Gaps = 26/604 (4%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
+R+G+ A +F + R++V++N MISGY++ + AR LFD MP+RD+V+WN M++
Sbjct: 51 IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMIS 110
Query: 61 GYVRN---RRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW 117
GYV R L +AR+LFD MP +D SWN M+SGYA+N EA +F +MP +NA+SW
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170
Query: 118 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK----MHV 173
+ ++ + NG ++ A LF + L+ G +K + L A + + +
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSG 230
Query: 174 RD--VVSWNTMISGYAQDGDMSQAKNLFDQSPH---------------QDVFTWTAMVSG 216
R+ V ++NT+I GY Q G + A+ LFDQ P ++V +W +M+
Sbjct: 231 REDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKA 290
Query: 217 YVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMI 276
Y++ G + AR FDQM ++ IS+N M+ GYV ++M+ A LF MP+R+ SWN M+
Sbjct: 291 YLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMV 350
Query: 277 TGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRS 336
+GY G++ AR F+ P++ VSW +II+ Y + Y+EA+++FI + +GE +
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 337 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 396
T + LS + L LG Q+H VVKT V NAL+ MY +CG I E+ +F+ +
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEM 469
Query: 397 E-EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
+ +++V++WN MI GYA HG +AL +F SMK+ G+ P IT V VL+AC+HAGL+D
Sbjct: 470 KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEA 529
Query: 456 TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASR 515
F SM Y + P +HY+ ++++ G+ EEA ++ +MPFEP WGALL A R
Sbjct: 530 KAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACR 589
Query: 516 IHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGY 575
I+ N L AAE + ++EP +S YVLL N+YA G W +A +R M ++K G
Sbjct: 590 IYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGS 649
Query: 576 SWVE 579
SWV+
Sbjct: 650 SWVD 653
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 17/165 (10%)
Query: 374 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVK 433
N L + G I EA D+FE +E ++ V+WNTMI+GY + QA +F+ M K
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP----K 99
Query: 434 PDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYT--CMIDLLGRAGRLEEA 491
D +T ++S G G + K + PS ++ MI + R+ EA
Sbjct: 100 RDVVTWNTMISGYVSCG----GIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEA 155
Query: 492 QDLMRNMPFEPPAASWGALLGASRIHGNTELGE-KAAEMVFKMEP 535
L MP E A SW A+ I G + GE +A ++F+ P
Sbjct: 156 LLLFEKMP-ERNAVSWSAM-----ITGFCQNGEVDSAVVLFRKMP 194
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/681 (35%), Positives = 380/681 (55%), Gaps = 33/681 (4%)
Query: 54 SWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM---- 109
S +++++ Y + L +A LF ++ V++W +++ + +A F +M
Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100
Query: 110 --PHKNAISWNGLLAAYVHNGRIEEACRLFDSK--SDWELISWNCLMGGFVKRKMLGAAR 165
P N + + R E+ F + D +L + N LM + K +LG
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAK--LLGMGS 158
Query: 166 KL-----FDKMHVR------DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMV 214
K+ FD+M R + V T I + D + +F+ P +DV ++ ++
Sbjct: 159 KISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGID----SVRRVFEVMPRKDVVSYNTII 214
Query: 215 SGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 270
+GY Q+GM ++A +M + + + ++++ + + + +E+ + + +
Sbjct: 215 AGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID 274
Query: 271 S----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 326
S ++++ Y ++ I + ++F + RD +SW ++++GY Q G Y EAL +F ++
Sbjct: 275 SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM 334
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
FS + CA +A L LGKQ+HG V++ G+ + F+ +AL+ MY KCG+I
Sbjct: 335 VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Query: 387 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
A +F+ + D VSW +I G+A HG G +A+ +FE MK GVKP+++ V VL+AC
Sbjct: 395 KAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 447 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 506
SH GL+D YF SM K Y + +HY + DLLGRAG+LEEA + + M EP +
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 507 WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRD 566
W LL + +H N EL EK AE +F ++ N G YVL+ N+YA++GRW + +R RMR
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 567 VGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 626
G++K SW+E++NK H F GD HP D+I FL+ + +M +EGYV+ T VLHD
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHD 634
Query: 627 VEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLII 686
V+EE K +L HSE+LAVAFGI+ G IRV KN+R+C DCH AIK ISKI R II
Sbjct: 635 VDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREII 694
Query: 687 LRDSHRFHHFNEGICSCGDYW 707
+RD+ RFHHFN G CSCGDYW
Sbjct: 695 VRDNSRFHHFNRGNCSCGDYW 715
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 174/384 (45%), Gaps = 60/384 (15%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG----- 61
DS RVF MPR+ VSYN +I+GY ++ + A + +M DL + L+
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 62 ----------------------------------YVRNRRLGDARRLFDSMPQKDVVSWN 87
Y ++ R+ D+ R+F + +D +SWN
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 312
Query: 88 AMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRL----FDS 139
++++GY QNG +EA +F QM A++++ ++ A H + +L
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 372
Query: 140 KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 199
+ + L+ + K + AARK+FD+M+V D VSW +I G+A G +A +LF
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 200 DQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYV-Q 250
++ Q V + A+++ G++DEA +F+ M + E+ + A VA + +
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 251 SNKMDMARELFEAMPSRNVSS-WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAII-- 307
+ K++ A M S W+T+++ + ++ A K+ + + D + A +
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLM 552
Query: 308 -SGYAQTGHYEEALNMFIEIKRDG 330
+ YA G ++E + + +++ G
Sbjct: 553 CNMYASNGRWKEMAKLRLRMRKKG 576
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/614 (38%), Positives = 357/614 (58%), Gaps = 25/614 (4%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
N +I Y + R +FDKMPQR++ +WN ++TG + L +A LF SMP++D
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFDS 139
+WN+M+SG+AQ+ +EA ++ M HK N S+ +L+A + + ++
Sbjct: 119 TWNSMVSGFAQHDRCEEAL-CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSL 177
Query: 140 KSDWELIS----WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
+ +S + L+ + K + A+++FD+M R+VVSWN++I+ + Q+G +A
Sbjct: 178 IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 196 KNLF----DQSPHQDVFTWTAMVSG-----YVQNGMLDEARTFFDQMPQKNEISYNAMVA 246
++F + D T +++S ++ G R + + + I NA V
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 247 GYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAI 306
Y + +++ AR +F++MP RNV + +MI+GY AR +F M +R+ VSW A+
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 307 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 366
I+GY Q G EEAL++F +KR+ +F+ L CAD+A L LG Q H V+K G+
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 367 ------ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 420
E FVGN+L+ MY KCG + E VF + E+D VSWN MI G+A++G+G +A
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 421 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 480
L +F M G KPD ITM+GVLSAC HAG ++ G YF SM +D+ V P HYTCM+D
Sbjct: 478 LELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 481 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM 540
LLGRAG LEEA+ ++ MP +P + WG+LL A ++H N LG+ AE + ++EP NSG
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP 597
Query: 541 YVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRI 600
YVLLSN+YA G+W D N+R MR GV K G SW+++Q H F V D HP K +I
Sbjct: 598 YVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQI 657
Query: 601 YAFLEELDLKMRRE 614
++ L+ L +MR E
Sbjct: 658 HSLLDILIAEMRPE 671
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 202/419 (48%), Gaps = 58/419 (13%)
Query: 144 ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP 203
E+ N L+ + K L R++FDKM R++ +WN++++G + G + +A +LF P
Sbjct: 54 EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 204 HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARE 259
+D TW +MVSG+ Q+ +EA +F M ++ NE S+ ++++ N M+ +
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ 173
Query: 260 LFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 315
+ + +V + ++ Y + G++ A+++FD M R+ VSW ++I+ + Q G
Sbjct: 174 VHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGP 233
Query: 316 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG-YETGCFVGN 374
EAL++F + + T + +S CA ++A+++G+++HG+VVK + N
Sbjct: 234 AVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSN 293
Query: 375 ALLGMYFKCGSIGEANDVFEGIE-------------------------------EKDVVS 403
A + MY KC I EA +F+ + E++VVS
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS 353
Query: 404 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC-----------SHAGLI 452
WN +IAGY ++G ++AL +F +K V P + +L AC +H ++
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVL 413
Query: 453 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
G ++ D V S +ID+ + G +EE + R M E SW A++
Sbjct: 414 KHGFKFQSGEEDDIFVGNS------LIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 208/441 (47%), Gaps = 57/441 (12%)
Query: 206 DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 265
++F ++ Y + G L++ R FD+MPQ+N ++N++V G + +D A LF +MP
Sbjct: 54 EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 266 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 325
R+ +WN+M++G+ AQ EEAL F
Sbjct: 114 ERDQCTWNSMVSGF-------------------------------AQHDRCEEALCYFAM 142
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 385
+ ++G LN +F+ LS C+ + + G Q+H + K+ + + ++G+AL+ MY KCG+
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 386 IGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 445
+ +A VF+ + +++VVSWN++I + ++G +AL VF+ M V+PDE+T+ V+SA
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Query: 446 CSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 505
C+ I G E + K+ + +D+ + R++EA+ + +MP A
Sbjct: 263 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 506 SWGALLGASRIHGNTELGEKAAEMVF-KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 564
+ G + KAA ++F KM N + L Y +G +A ++ +
Sbjct: 323 ETSMISGYAMAAST-----KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 565 RDVGVQKVTGYSWVEV--------------QNKIHKFTVGDCFHP-EKDRIYAFLEELDL 609
+ V T YS+ + Q +H G F E+D I+ +D+
Sbjct: 378 KRESVCP-THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 610 KMR----REGYVSSTKLVLHD 626
++ EGY+ K++ D
Sbjct: 437 YVKCGCVEEGYLVFRKMMERD 457
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 140/613 (22%), Positives = 248/613 (40%), Gaps = 134/613 (21%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
+ G + +VF+ MP+R+ ++N++++G + A LF MP+RD +WN M++G
Sbjct: 67 KCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSG 126
Query: 62 YVRNRRLGDARRLFDSMPQK---------------------------------------D 82
+ ++ R +A F M ++ D
Sbjct: 127 FAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSD 186
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSD 142
V +A++ Y++ G ++A+ VF +M +N +SWN L+ + NG EA +F +
Sbjct: 187 VYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLE 246
Query: 143 WELISWNCLMGGFVKRKMLGAARKLFDKMHVR---------DVVSWNTMISGYAQDGDMS 193
+ + + +A K+ ++H R D++ N + YA+ +
Sbjct: 247 SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIK 306
Query: 194 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNK 253
+A+ +FD P ++V T+M+SGY AR F +M ++N +S+NA++AGY Q+ +
Sbjct: 307 EARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Query: 254 MDMARELFEAMPSRNVSSW----------------------------------------- 272
+ A LF + +V
Sbjct: 367 NEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDD 426
Query: 273 ----NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 328
N++I Y + G + + +F M +RDCVSW A+I G+AQ G+ EAL +F E+
Sbjct: 427 IFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE 486
Query: 329 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 388
GE + T LS C +E G+ + + G A L ++ C
Sbjct: 487 SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD-------FGVAPLRDHYTC----- 534
Query: 389 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH 448
M+ R GF ++A + E M ++PD + +L+AC
Sbjct: 535 ------------------MVDLLGRAGFLEEAKSMIEEMP---MQPDSVIWGSLLAACKV 573
Query: 449 AGLIDRGTEYFYSMNKDYSVTPS-SKHYTCMIDLLGRAGRLEEAQDLMRNMPFE----PP 503
I G Y K V PS S Y + ++ G+ E+ ++ ++M E P
Sbjct: 574 HRNITLGK---YVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQP 630
Query: 504 AASWGALLGASRI 516
SW + G +
Sbjct: 631 GCSWIKIQGHDHV 643
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 37/227 (16%)
Query: 319 ALNMFIEIKRDGESLNRST-FSCALSTC--ADIAALELGKQIHGQVVKTGYETGCFVGNA 375
A F+++ D S S+ F+ L +C + ++A+ + + +H V+K+G+ F+ N
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNR 60
Query: 376 LLGMYFKCGS-------------------------------IGEANDVFEGIEEKDVVSW 404
L+ Y KCGS + EA+ +F + E+D +W
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 405 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 464
N+M++G+A+H ++AL F M G +E + VLSACS +++G + +S+
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ-VHSLIA 179
Query: 465 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
+ ++D+ + G + +AQ + M + SW +L+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLI 225
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/670 (35%), Positives = 369/670 (55%), Gaps = 40/670 (5%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
D N ++ YV+ R AR+LFD MP+++VVSW AM+ GY +G+ E ++F M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 111 HKNAISWNGLLAAYV-----HNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 165
N +A V ++GRIEE + + LIS FV+
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHE-----FVR-------- 174
Query: 166 KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 225
NT++ Y+ +A + D P+ D+ +++ +SGY++ G E
Sbjct: 175 --------------NTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKE 220
Query: 226 ARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMP----SRNVSSWNTMIT 277
+ + N ++Y + + + +++A ++ M + V + +I
Sbjct: 221 GLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALIN 280
Query: 278 GYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 337
YG+ G + A+++FD ++ I+ Y Q +EEALN+F ++ N T
Sbjct: 281 MYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYT 340
Query: 338 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE 397
F+ L++ A+++ L+ G +HG V+K+GY VGNAL+ MY K GSI +A F G+
Sbjct: 341 FAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMT 400
Query: 398 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
+D+V+WNTMI+G + HG G++AL F+ M G P+ IT +GVL ACSH G +++G
Sbjct: 401 FRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLH 460
Query: 458 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIH 517
YF + K + V P +HYTC++ LL +AG ++A+D MR P E +W LL A +
Sbjct: 461 YFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVR 520
Query: 518 GNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSW 577
N LG+K AE + P++SG+YVLLSN++A S W +RS M + GV+K G SW
Sbjct: 521 RNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSW 580
Query: 578 VEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLK 637
+ ++N+ H F D HPE IYA ++E+ K++ GY HDV+EE++E L
Sbjct: 581 IGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLS 640
Query: 638 YHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFN 697
YHSEKLAVA+G++ P P+ V KN+R+C+DCH+AIK ISKI R I++RDS+RFHHF
Sbjct: 641 YHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFL 700
Query: 698 EGICSCGDYW 707
+G CSC DYW
Sbjct: 701 DGQCSCCDYW 710
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 203/479 (42%), Gaps = 65/479 (13%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSY--NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVM 58
+R G A + R+ +Y N++I+ Y++ AR LFD MP+R++VSW M
Sbjct: 47 LRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAM 106
Query: 59 LTGYVRNRRLGDARRLFDSM-------PQKDVVSW------------------------- 86
+ GY + + +LF SM P + V +
Sbjct: 107 MKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYG 166
Query: 87 --------NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD 138
N ++ Y+ EA V +P+ + ++ L+ Y+ G +E +
Sbjct: 167 LISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLR 226
Query: 139 SKSDWELISWNCL-----MGGFVKRKMLGAARKLFDKMHVR-----DVVSWNTMISGYAQ 188
++ + + WN L + F + L A ++ +M VR +V + +I+ Y +
Sbjct: 227 KTANEDFV-WNNLTYLSSLRLFSNLRDLNLALQVHSRM-VRFGFNAEVEACGALINMYGK 284
Query: 189 DGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAM 244
G + A+ +FD + Q++F T ++ Y Q+ +EA F +M K NE ++ +
Sbjct: 285 CGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAIL 344
Query: 245 VAGYVQSNKM---DMARELFEAMPSRN-VSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 300
+ + + + D+ L RN V N ++ Y ++G I ARK F M RD
Sbjct: 345 LNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI 404
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 360
V+W +ISG + G EAL F + GE NR TF L C+ I +E G Q
Sbjct: 405 VTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQ 464
Query: 361 VVKT-GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMI-AGYARHGF 416
++K + ++G+ K G +A D E DVV+W T++ A Y R +
Sbjct: 465 LMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNY 523
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 342 LSTCADIAALELGKQIHGQVVKTGYET---GCFVGNALLGMYFKCGSIGEANDVFEGIEE 398
L CA+ + L +G+ IH ++ T + + N+L+ +Y KC A +F+ + E
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 399 KDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTE 457
++VVSW M+ GY GF + L +F+SM G +P+E V +CS++G I+ G +
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 458 Y 458
+
Sbjct: 158 F 158
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/533 (40%), Positives = 335/533 (62%), Gaps = 9/533 (1%)
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
D+V NT+++ YA+ G + +A+ +F++ P +D TWT ++SGY Q+ +A FF+QM
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 235 Q----KNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIA 286
+ NE + ++++ + +L + NV + ++ Y + G +
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
A+ +FD + R+ VSW A+I+G+A+ E+AL +F + RDG + +++ C+
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 406
LE GK +H ++K+G + F GN LL MY K GSI +A +F+ + ++DVVSWN+
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 407 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 466
++ YA+HGFGK+A+ FE M+ +G++P+EI+ + VL+ACSH+GL+D G Y+ M KD
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD- 392
Query: 467 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 526
+ P + HY ++DLLGRAG L A + MP EP AA W ALL A R+H NTELG A
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Query: 527 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHK 586
AE VF+++P + G +V+L N+YA+ GRW DA +R +M++ GV+K SWVE++N IH
Sbjct: 453 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHM 512
Query: 587 FTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 646
F D HP+++ I EE+ K++ GYV T V+ V+++E+E L+YHSEK+A+A
Sbjct: 513 FVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 572
Query: 647 FGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEG 699
F +L P G I + KN+RVC DCH AIK SK+VGR II+RD++RFHHF +
Sbjct: 573 FALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 166/340 (48%), Gaps = 27/340 (7%)
Query: 11 RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGD 70
R +NT+ ++ +V + +I G + +A + + + D+V N +L Y + L +
Sbjct: 61 RFYNTLLKKCTV-FKLLIQGRIVHAH------ILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLAAY 124
AR++F+ MPQ+D V+W ++SGY+Q+ +A F QM P++ +S AA
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 125 VHNGRIEEACRLFDSKS--DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 182
G F K D + + L+ + + ++ A+ +FD + R+ VSWN +
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 183 ISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE 238
I+G+A+ +A LF F++ ++ G L++ + M + E
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 239 ----ISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDM 294
+ N ++ Y +S + AR++F+ + R+V SWN+++T Y Q+G +A F+
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 295 MP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
M + + +S+ ++++ + +G +E + + +K+DG
Sbjct: 354 MRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG 393
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 174/387 (44%), Gaps = 61/387 (15%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQRDLVS--- 54
G + A +VF MP+R V++ +ISGY ++ R A F++M P +S
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 55 ------------------------------WNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
+ +L Y R + DA+ +FD++ ++ V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEA--CRLFD 138
SWNA+++G+A+ ++A E+F M + S+ L A G +E+ +
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 139 SKSDWELISW--NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 196
KS +L+++ N L+ + K + ARK+FD++ RDVVSWN++++ YAQ G +A
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 197 NLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS----YNAMVAGY 248
F++ + ++ ++++ +G+LDE +++ M + + Y +V
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLL 408
Query: 249 VQSNKMDMARELFEAMPSRNVSS-WNTMITG--YGQNGDIA--QARKLFDMMPQRDCVSW 303
++ ++ A E MP ++ W ++ +N ++ A +F++ P D
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPD-DPGPH 467
Query: 304 AAIISGYAQTGHYEEALNMFIEIKRDG 330
+ + YA G + +A + ++K G
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESG 494
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 46/275 (16%)
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
+R ++ L C L G+ +H ++++ + +GN LL MY KCGS+ EA VF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA-------- 445
E + ++D V+W T+I+GY++H AL+ F M G P+E T+ V+ A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 446 CSHA---------------------------GLIDRGTEYFYSMNKDYSVTPSSKHYTCM 478
C H GL+D F ++ V+ + +
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-----WNAL 233
Query: 479 IDLLGRAGRLEEAQDLMRNM---PFEPPAASWGALLGASRIHGNTELGEKA-AEMVFKME 534
I R E+A +L + M F P S+ +L GA G E G+ A M+ E
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 535 PHNSGMYVLLSNLYAASGRWADAGNMRSRM--RDV 567
+ L ++YA SG DA + R+ RDV
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/676 (35%), Positives = 383/676 (56%), Gaps = 18/676 (2%)
Query: 50 RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM 109
+DL N ++ Y L AR++FD M +++VVSW +M+ GYA+ +A +A ++F++M
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 110 PHKNAISWNGLL-------AAYVHNGRIEEACRLFDSKSDWEL--ISWNCLMGGFVKRKM 160
++ N + A + + E F S E+ + + L+ ++K
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 161 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSG 216
+ A++LFD+ ++ N M S Y + G +A +F D D + + +S
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 217 YVQNGMLDEARTFFDQMPQKNEISY----NAMVAGYVQSNKMDMARELFEAMPSRNVSSW 272
Q + ++ + + S+ NA++ Y++ ++ D A +F+ M ++ V +W
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK-RDGE 331
N+++ GY +NG++ A + F+ MP+++ VSW IISG Q +EEA+ +F ++ ++G
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
+ + T S C + AL+L K I+ + K G + +G L+ M+ +CG A
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 392 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
+F + +DV +W I A G ++A+ +F+ M G+KPD + VG L+ACSH GL
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
+ +G E FYSM K + V+P HY CM+DLLGRAG LEEA L+ +MP EP W +LL
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLL 646
Query: 512 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 571
A R+ GN E+ AAE + + P +G YVLLSN+YA++GRW D +R M++ G++K
Sbjct: 647 AACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRK 706
Query: 572 VTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEE 631
G S ++++ K H+FT GD HPE I A L+E+ + G+V VL DV+E+E
Sbjct: 707 PPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKE 766
Query: 632 KEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSH 691
K ML HSEKLA+A+G+++ G IR++KNLRVC DCH+ K SK+ R IILRD++
Sbjct: 767 KIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNN 826
Query: 692 RFHHFNEGICSCGDYW 707
RFH+ +G CSCGD+W
Sbjct: 827 RFHYIRQGKCSCGDFW 842
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 208/447 (46%), Gaps = 51/447 (11%)
Query: 102 AREVFYQM-PHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGFV 156
A+EVF + +N L+ Y +G EA LF +S + ++ +
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 157 KRKMLGAARK---LFDKM-HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 212
K + G + L KM + +D+ N+++ YA+ G++ A+ +FD+ ++V +WT+
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 213 MVSGYVQNGMLDEARTFFDQMPQKNEISYNA-----MVAGYVQSNKMDMARELFEAMPSR 267
M+ GY + +A F +M + E++ N+ +++ + ++ +++ + +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 268 NVSSWNTMITG----YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 323
+ + M++ Y + I A++LFD + A+ S Y + G EAL +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 324 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 383
+ G +R + A+S+C+ + + GK HG V++ G+E+ + NAL+ MY KC
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 384 -------------------------------GSIGEANDVFEGIEEKDVVSWNTMIAGYA 412
G + A + FE + EK++VSWNT+I+G
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 413 RHGFGKQALMVFESMKTI-GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
+ ++A+ VF SM++ GV D +TM+ + SAC H G +D +Y + K+ +
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLD 504
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNM 498
+ T ++D+ R G E A + ++
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 154/329 (46%), Gaps = 24/329 (7%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
NA+I Y++ R A +FD+M + +V+WN ++ GYV N + A F++MP+K++V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG-----LLAAYVHNGRIEEACRLF-- 137
SWN ++SG Q +EA EVF M + ++ +G + +A H G ++ A ++
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 138 --DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
+ ++ L+ F + +A +F+ + RDV +W I A G+ +A
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 196 KNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVA 246
LFD Q D + ++ G++ + + F M + + +S Y MV
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 247 GYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQ----ARKLFDMMPQRDCV 301
++ ++ A +L E MP N WN+++ G++ A K+ + P+R
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG- 674
Query: 302 SWAAIISGYAQTGHYEEALNMFIEIKRDG 330
S+ + + YA G + + + + +K G
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKG 703
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 163/377 (43%), Gaps = 58/377 (15%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQR---- 50
M+ D A R+F+ + NAM S Y+R A +F+ M P R
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 51 -------------------------DLVSW----NVMLTGYVRNRRLGDARRLFDSMPQK 81
SW N ++ Y++ R A R+FD M K
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
VV+WN++++GY +NG D A E F MP KN +SWN +++ V EEA +F S
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 142 DWELISWN--CLMGGFVKRKMLGA---ARKLF---DKMHVR-DVVSWNTMISGYAQDGDM 192
E ++ + +M LGA A+ ++ +K ++ DV T++ +++ GD
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 193 SQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGY 248
A ++F+ ++DV WTA + G + A FD M ++ + +++ +
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 249 VQSNKMDMARELFEAMPSRNVSS-----WNTMITGYGQNGDIAQARKLFDMMP-QRDCVS 302
+ +E+F +M + S + M+ G+ G + +A +L + MP + + V
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 303 WAAIISGYAQTGHYEEA 319
W ++++ G+ E A
Sbjct: 642 WNSLLAACRVQGNVEMA 658
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 150/311 (48%), Gaps = 31/311 (9%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNR 66
D+A R+F+ M ++ V++N++++GY+ N A + F+ MP++++VSWN +++G V+
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 67 RLGDARRLFDSMPQK-----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN--- 118
+A +F SM + D V+ ++ S G D A+ ++Y + KN I +
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRL 507
Query: 119 --GLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-- 174
L+ + G E A +F+S ++ ++ +W +G A +LFD M +
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 175 --DVVSWNTMISGYAQDGDMSQAKNLF-------DQSPHQDVFTWTAMVSGYVQNGMLDE 225
D V++ ++ + G + Q K +F SP +DV + MV + G+L+E
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP-EDVH-YGCMVDLLGRAGLLEE 625
Query: 226 ARTFFDQMP-QKNEISYNAMVAGYVQSNKMDM---ARELFEAMPSRNVSSWNTMITGYGQ 281
A + MP + N++ +N+++A ++M A E + + S+ + Y
Sbjct: 626 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 685
Query: 282 NG---DIAQAR 289
G D+A+ R
Sbjct: 686 AGRWNDMAKVR 696
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/573 (38%), Positives = 354/573 (61%), Gaps = 16/573 (2%)
Query: 149 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP----- 203
N L+ + K A ++FD+M RD ++W ++++ Q ++S K L S
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ-ANLS-GKTLSVFSSVGSSS 99
Query: 204 --HQDVFTWTAMVSGYVQNGMLDEART----FFDQMPQKNEISYNAMVAGYVQSNKMDMA 257
D F ++A+V G +D R F +E+ +++V Y + ++ A
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 258 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 317
+ +F+++ +N SW M++GY ++G +A +LF ++P ++ SW A+ISG+ Q+G
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGL 219
Query: 318 EALNMFIEIKRDG-ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 376
EA ++F E++R+ + L+ S + CA++AA G+Q+HG V+ G+++ F+ NAL
Sbjct: 220 EAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279
Query: 377 LGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDE 436
+ MY KC + A D+F + +DVVSW ++I G A+HG ++AL +++ M + GVKP+E
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339
Query: 437 ITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMR 496
+T VG++ ACSH G +++G E F SM KDY + PS +HYTC++DLLGR+G L+EA++L+
Sbjct: 340 VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 399
Query: 497 NMPFEPPAASWGALLGASRIHGNTELGEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWA 555
MPF P +W ALL A + G ++G + A+ +V + + Y+LLSN+YA++ W
Sbjct: 400 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG 459
Query: 556 DAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR-RE 614
R ++ ++ V+K G+S VEV+ + F G+ HP K+ I+ L++L+ +MR R
Sbjct: 460 KVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRN 519
Query: 615 GYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAI 674
GYV T +LHD++E+EKE +L +HSE+ AVA+G+L G PIR++KNLRVC DCH +
Sbjct: 520 GYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVL 579
Query: 675 KHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
KHIS+I R II+RD+ R+HHF G CSC D+W
Sbjct: 580 KHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 190/420 (45%), Gaps = 57/420 (13%)
Query: 64 RNRRLGDARRLFDSMPQKDVVSW----NAMLSGYAQNGYADEAREVFYQMPHKNAISWNG 119
RNR L A+ L + + +V N +++ Y + G A A +VF +MPH++ I+W
Sbjct: 15 RNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWAS 74
Query: 120 LLAAY-----------------------------------------VHNGRIEEACRLFD 138
+L A + +GR + C
Sbjct: 75 VLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR-QVHCHFIV 133
Query: 139 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 198
S+ + + + L+ + K +L +A+ +FD + V++ +SW M+SGYA+ G +A L
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALEL 193
Query: 199 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMA- 257
F P +++++WTA++SG+VQ+G EA + F +M ++ + +V + ++A
Sbjct: 194 FRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAA 253
Query: 258 ----RELFEAMPSRNVSSW----NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG 309
R++ + + S N +I Y + D+ A+ +F M RD VSW ++I G
Sbjct: 254 SIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313
Query: 310 YAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT-GYET 368
AQ G E+AL ++ ++ G N TF + C+ + +E G+++ + K G
Sbjct: 314 MAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRP 373
Query: 369 GCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHGFGKQALMVFESM 427
LL + + G + EA ++ + D +W +++ R G G+ + + + +
Sbjct: 374 SLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 145/287 (50%), Gaps = 27/287 (9%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
D V + ++ Y + L A+ +FDS+ K+ +SW AM+SGYA++G +EA E+F +P
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 111 HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK 170
KN SW L++ +V +G+ EA +F ++ E + ++ V ++GA L
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVF-TEMRRERVD---ILDPLVLSSIVGACANLAAS 254
Query: 171 MHVRDVVSW-------------NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGY 217
+ R V N +I YA+ D+ AK++F + H+DV +WT+++ G
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGM 314
Query: 218 VQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPS-----RN 268
Q+G ++A +D M + NE+++ ++ ++ RELF++M +
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374
Query: 269 VSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIISGYAQTG 314
+ + ++ G++G + +A L MP D +WAA++S + G
Sbjct: 375 LQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 421
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 149/325 (45%), Gaps = 27/325 (8%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
+ G +SA VF+++ ++++S+ AM+SGY ++ R A +LF +P ++L SW +++G
Sbjct: 152 KCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISG 211
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW---- 117
+V++ + +A +F M ++ V + ++ A+ A + + H I+
Sbjct: 212 FVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDS 271
Query: 118 -----NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH 172
N L+ Y + A +F +++SW L+ G + A L+D M
Sbjct: 272 CVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMV 331
Query: 173 VRDV----VSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGML 223
V V++ +I + G + + + LF D + +T ++ ++G+L
Sbjct: 332 SHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLL 391
Query: 224 DEARTFFDQMP-QKNEISYNAMVAGYVQSNKMDM----ARELFEAMPSRNVSSWNTMITG 278
DEA MP +E ++ A+++ + + M A L + ++ S++ +
Sbjct: 392 DEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNI 451
Query: 279 YGQN---GDIAQA-RKLFDMMPQRD 299
Y G +++A RKL +M ++D
Sbjct: 452 YASASLWGKVSEARRKLGEMEVRKD 476
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 14/229 (6%)
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
L CA L K +H +VK G C + N L+ +Y KCG+ A VF+ + +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 402 VSWNTMIAGYARHGF-GKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE--- 457
++W +++ + GK + + G++PD+ ++ AC++ G ID G +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 458 -YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 516
+ S + V SS ++D+ + G L A+ + ++ + SW A++
Sbjct: 130 HFIVSEYANDEVVKSS-----LVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAK 183
Query: 517 HGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMR 565
G E+A E+ + N + L + + SG+ +A ++ + MR
Sbjct: 184 SGRK---EEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/527 (41%), Positives = 326/527 (61%), Gaps = 11/527 (2%)
Query: 192 MSQAKNLFDQSPHQ-DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQ 250
MS A +F + +VF W ++ GY + G A + + +M + + ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 251 SNKMDMAR-ELFEAMPSRNVSS--------WNTMITGYGQNGDIAQARKLFDMMPQRDCV 301
MA L E + S + S N+++ Y GD+A A K+FD MP++D V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 302 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 361
+W ++I+G+A+ G EEAL ++ E+ G + T LS CA I AL LGK++H +
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 362 VKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 421
+K G N LL +Y +CG + EA +F+ + +K+ VSW ++I G A +GFGK+A+
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 422 MVFESMK-TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 480
+F+ M+ T G+ P EIT VG+L ACSH G++ G EYF M ++Y + P +H+ CM+D
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 481 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM 540
LL RAG++++A + +++MP +P W LLGA +HG+++L E A + ++EP++SG
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428
Query: 541 YVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRI 600
YVLLSN+YA+ RW+D +R +M GV+KV G+S VEV N++H+F +GD HP+ D I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 601 YAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRV 660
YA L+E+ ++R EGYV V DVEEEEKE+ + YHSEK+A+AF +++ P PI V
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 661 IKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+KNLRVC DCH AIK +SK+ R I++RD RFHHF G CSC DYW
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 19/248 (7%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK--- 112
N +L Y + A ++FD MP+KD+V+WN++++G+A+NG +EA ++ +M K
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 113 -NAISWNGLLAAYVHNGRIEEACR----LFDSKSDWELISWNCLMGGFVKRKMLGAARKL 167
+ + LL+A G + R + L S N L+ + + + A+ L
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 168 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD-----VFTWTAMVSGYVQNGM 222
FD+M ++ VSW ++I G A +G +A LF + T+ ++ GM
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 339
Query: 223 LDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMI 276
+ E +F +M ++ +I + MV ++ ++ A E ++MP + NV W T++
Sbjct: 340 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Query: 277 TGYGQNGD 284
+GD
Sbjct: 400 GACTVHGD 407
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 50/243 (20%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ-------------- 49
G SA +VF+ MP + V++N++I+G+ N + A L+ +M
Sbjct: 170 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 229
Query: 50 -------------------------RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
R+L S NV+L Y R R+ +A+ LFD M K+ V
Sbjct: 230 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 289
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNA-----ISWNGLLAAYVHNGRIEEACRLF-- 137
SW +++ G A NG+ EA E+F M I++ G+L A H G ++E F
Sbjct: 290 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 349
Query: 138 ---DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMS 193
+ K + + + C++ + + A + M ++ +VV W T++ GD
Sbjct: 350 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 409
Query: 194 QAK 196
A+
Sbjct: 410 LAE 412
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/657 (34%), Positives = 378/657 (57%), Gaps = 54/657 (8%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAA--- 123
AR++FD +P+ + WNA++ GY++N + +A ++ M ++ ++ LL A
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 124 --YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 181
++ GR A ++F D ++ N L+ + K + LG+AR +F+ + +
Sbjct: 132 LSHLQMGRFVHA-QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPL-------- 182
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKN 237
P + + +WTA+VS Y QNG EA F QM + +
Sbjct: 183 ---------------------PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPD 221
Query: 238 EISYNAMVAGYVQSNKMDMARELFEAMPSRNVS-------SWNTMITGYGQNGDIAQARK 290
++ +++ + + R + ++ + S NTM Y + G +A A+
Sbjct: 222 WVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---YAKCGQVATAKI 278
Query: 291 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 350
LFD M + + W A+ISGYA+ G+ EA++MF E+ + + + A+S CA + +
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 351 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 410
LE + ++ V ++ Y F+ +AL+ M+ KCGS+ A VF+ ++DVV W+ MI G
Sbjct: 339 LEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVG 398
Query: 411 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 470
Y HG ++A+ ++ +M+ GV P+++T +G+L AC+H+G++ G +F M D+ + P
Sbjct: 399 YGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINP 457
Query: 471 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 530
+HY C+IDLLGRAG L++A ++++ MP +P WGALL A + H + ELGE AA+ +
Sbjct: 458 QQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQL 517
Query: 531 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 590
F ++P N+G YV LSNLYAA+ W +R RM++ G+ K G SWVEV+ ++ F VG
Sbjct: 518 FSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVG 577
Query: 591 DCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 650
D HP + I +E ++ +++ G+V++ LHD+ +EE E L HSE++A+A+G++
Sbjct: 578 DKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLI 637
Query: 651 TIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+ P G P+R+ KNLR C +CH A K ISK+V R I++RD++RFHHF +G+CSCGDYW
Sbjct: 638 STPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 173/350 (49%), Gaps = 18/350 (5%)
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKN 237
+I + GD++ A+ +FD P +F W A++ GY +N +A + M +
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 238 EISYNAMVAGYVQSNKMDMAR----ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFD 293
++ ++ + + M R ++F +V N +I Y + + AR +F+
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 294 --MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
+P+R VSW AI+S YAQ G EAL +F ++++ + L+ + L
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
+ G+ IH VVK G E + +L MY KCG + A +F+ ++ +++ WN MI+GY
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG-TEYFYSMNKDY--SV 468
A++G+ ++A+ +F M V+PD I++ +SAC+ G +++ + Y Y DY V
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV 358
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG 518
SS +ID+ + G +E A+ L+ + + W A++ +HG
Sbjct: 359 FISS----ALIDMFAKCGSVEGAR-LVFDRTLDRDVVVWSAMIVGYGLHG 403
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 136/539 (25%), Positives = 220/539 (40%), Gaps = 119/539 (22%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP--------------- 48
G A +VF+ +PR +NA+I GY RN F A ++ M
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 49 ------------------------QRDLVSWNVMLTGYVRNRRLGDARRLFD--SMPQKD 82
D+ N ++ Y + RRLG AR +F+ +P++
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSD 142
+VSW A++S YAQNG EA E+F QM R D K D
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQM-------------------------RKMDVKPD 221
Query: 143 W-----ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKN 197
W L ++ CL R + + K+ ++ ++S NTM YA+ G ++ AK
Sbjct: 222 WVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---YAKCGQVATAKI 278
Query: 198 LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNK 253
LFD+ ++ W AM+SGY +NG EA F +M K + IS + ++ Q
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 254 MDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG 309
++ AR ++E + +V + +I + + G + AR +FD RD V W+A+I G
Sbjct: 339 LEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVG 398
Query: 310 YAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETG 369
Y G EA++++ ++R G N TF L C H +V+ G+
Sbjct: 399 YGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN-----------HSGMVREGW--- 444
Query: 370 CFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 429
+F N + + + +I R G QA +E +K
Sbjct: 445 ---------WFF--------NRMADHKINPQQQHYACVIDLLGRAGHLDQA---YEVIKC 484
Query: 430 IGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 488
+ V+P +LSAC ++ G Y+ + +S+ PS+ + + L A RL
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGE---YAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 414
KQIH +++ G + F+ L+ G I A VF+ + + WN +I GY+R+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 415 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT---EYFYSMNKDYSVTPS 471
+ AL+++ +M+ V PD T +L ACS + G + + D V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPF-EPPAASWGALLGA 513
+ +I L + RL A+ + +P E SW A++ A
Sbjct: 158 NG----LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/675 (35%), Positives = 382/675 (56%), Gaps = 18/675 (2%)
Query: 50 RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM 109
+DL N ++ Y L AR++FD M +++VVSW +M+ GYA+ +A +A ++F++M
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 110 PHKNAISWNGLL-------AAYVHNGRIEEACRLFDSKSDWEL--ISWNCLMGGFVKRKM 160
++ N + A + + E F S E+ + + L+ ++K
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 161 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSG 216
+ A++LFD+ ++ N M S Y + G +A +F D D + + +S
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 217 YVQNGMLDEARTFFDQMPQKNEISY----NAMVAGYVQSNKMDMARELFEAMPSRNVSSW 272
Q + ++ + + S+ NA++ Y++ ++ D A +F+ M ++ V +W
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK-RDGE 331
N+++ GY +NG++ A + F+ MP+++ VSW IISG Q +EEA+ +F ++ ++G
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
+ + T S C + AL+L K I+ + K G + +G L+ M+ +CG A
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 392 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
+F + +DV +W I A G ++A+ +F+ M G+KPD + VG L+ACSH GL
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
+ +G E FYSM K + V+P HY CM+DLLGRAG LEEA L+ +MP EP W +LL
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLL 646
Query: 512 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 571
A R+ GN E+ AAE + + P +G YVLLSN+YA++GRW D +R M++ G++K
Sbjct: 647 AACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRK 706
Query: 572 VTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEE 631
G S ++++ K H+FT GD HPE I A L+E+ + G+V VL DV+E+E
Sbjct: 707 PPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKE 766
Query: 632 KEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSH 691
K ML HSEKLA+A+G+++ G IR++KNLRVC DCH+ K SK+ R IILRD++
Sbjct: 767 KIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNN 826
Query: 692 RFHHFNEGICSCGDY 706
RFH+ +G CSCGD+
Sbjct: 827 RFHYIRQGKCSCGDF 841
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 208/447 (46%), Gaps = 51/447 (11%)
Query: 102 AREVFYQM-PHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGFV 156
A+EVF + +N L+ Y +G EA LF +S + ++ +
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 157 KRKMLGAARK---LFDKM-HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 212
K + G + L KM + +D+ N+++ YA+ G++ A+ +FD+ ++V +WT+
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 213 MVSGYVQNGMLDEARTFFDQMPQKNEISYNA-----MVAGYVQSNKMDMARELFEAMPSR 267
M+ GY + +A F +M + E++ N+ +++ + ++ +++ + +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 268 NVSSWNTMITG----YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 323
+ + M++ Y + I A++LFD + A+ S Y + G EAL +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 324 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 383
+ G +R + A+S+C+ + + GK HG V++ G+E+ + NAL+ MY KC
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 384 -------------------------------GSIGEANDVFEGIEEKDVVSWNTMIAGYA 412
G + A + FE + EK++VSWNT+I+G
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 413 RHGFGKQALMVFESMKTI-GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
+ ++A+ VF SM++ GV D +TM+ + SAC H G +D +Y + K+ +
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLD 504
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNM 498
+ T ++D+ R G E A + ++
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 154/329 (46%), Gaps = 24/329 (7%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
NA+I Y++ R A +FD+M + +V+WN ++ GYV N + A F++MP+K++V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG-----LLAAYVHNGRIEEACRLF-- 137
SWN ++SG Q +EA EVF M + ++ +G + +A H G ++ A ++
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 138 --DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
+ ++ L+ F + +A +F+ + RDV +W I A G+ +A
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 196 KNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVA 246
LFD Q D + ++ G++ + + F M + + +S Y MV
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 247 GYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGDIAQ----ARKLFDMMPQRDCV 301
++ ++ A +L E MP N WN+++ G++ A K+ + P+R
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERT-G 674
Query: 302 SWAAIISGYAQTGHYEEALNMFIEIKRDG 330
S+ + + YA G + + + + +K G
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKG 703
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 163/377 (43%), Gaps = 58/377 (15%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQR---- 50
M+ D A R+F+ + NAM S Y+R A +F+ M P R
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 51 -------------------------DLVSW----NVMLTGYVRNRRLGDARRLFDSMPQK 81
SW N ++ Y++ R A R+FD M K
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
VV+WN++++GY +NG D A E F MP KN +SWN +++ V EEA +F S
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 142 DWELISWN--CLMGGFVKRKMLGA---ARKLF---DKMHVR-DVVSWNTMISGYAQDGDM 192
E ++ + +M LGA A+ ++ +K ++ DV T++ +++ GD
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 193 SQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGY 248
A ++F+ ++DV WTA + G + A FD M ++ + +++ +
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 249 VQSNKMDMARELFEAMPSRNVSS-----WNTMITGYGQNGDIAQARKLFDMMP-QRDCVS 302
+ +E+F +M + S + M+ G+ G + +A +L + MP + + V
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 303 WAAIISGYAQTGHYEEA 319
W ++++ G+ E A
Sbjct: 642 WNSLLAACRVQGNVEMA 658
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 150/311 (48%), Gaps = 31/311 (9%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNR 66
D+A R+F+ M ++ V++N++++GY+ N A + F+ MP++++VSWN +++G V+
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 67 RLGDARRLFDSMPQK-----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN--- 118
+A +F SM + D V+ ++ S G D A+ ++Y + KN I +
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRL 507
Query: 119 --GLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-- 174
L+ + G E A +F+S ++ ++ +W +G A +LFD M +
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 175 --DVVSWNTMISGYAQDGDMSQAKNLF-------DQSPHQDVFTWTAMVSGYVQNGMLDE 225
D V++ ++ + G + Q K +F SP +DV + MV + G+L+E
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP-EDVH-YGCMVDLLGRAGLLEE 625
Query: 226 ARTFFDQMP-QKNEISYNAMVAGYVQSNKMDM---ARELFEAMPSRNVSSWNTMITGYGQ 281
A + MP + N++ +N+++A ++M A E + + S+ + Y
Sbjct: 626 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 685
Query: 282 NG---DIAQAR 289
G D+A+ R
Sbjct: 686 AGRWNDMAKVR 696
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/541 (37%), Positives = 342/541 (63%), Gaps = 8/541 (1%)
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
DV N +I+ Y++ G + A+ +FD + + +W M+ Y +N M EA F +M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 235 QK----NEISYNAMVAGY-VQSNKMDMARELFEAMPS---RNVSSWNTMITGYGQNGDIA 286
+ +E + +++++ V + ++ + ++ + N+ ++ Y + G I
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
A ++F+ M + V+W+++++GY Q +YEEAL ++ +R N+ T S + C+
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 406
++AAL GKQ+H + K+G+ + FV ++ + MY KCGS+ E+ +F ++EK++ WNT
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 407 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 466
+I+G+A+H K+ +++FE M+ G+ P+E+T +LS C H GL++ G +F M Y
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 467 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 526
++P+ HY+CM+D+LGRAG L EA +L++++PF+P A+ WG+LL + R++ N EL E A
Sbjct: 395 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA 454
Query: 527 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHK 586
AE +F++EP N+G +VLLSN+YAA+ +W + R +RD V+KV G SW+++++K+H
Sbjct: 455 AEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHT 514
Query: 587 FTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 646
F+VG+ HP I + L+ L +K R+ GY S + LHDVE +KE +L HSEKLA+
Sbjct: 515 FSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALV 574
Query: 647 FGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDY 706
FG++ +P P+R++KNLR+C DCH +K S R II+RD +RFHHF++G CSCGD+
Sbjct: 575 FGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDF 634
Query: 707 W 707
W
Sbjct: 635 W 635
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 162/357 (45%), Gaps = 30/357 (8%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV- 83
N +I+ Y + LAR +FD M +R LVSWN M+ Y RNR +A +F M +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 84 ---VSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN-----GLLAAYVHNGRIEEACR 135
+ +++LS N A E +++ + + K I N LL Y G I++A +
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKL-HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQ 218
Query: 136 LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGD 191
+F+S D ++W+ ++ G+V+ K A L+ + ++ + +++I +
Sbjct: 219 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 278
Query: 192 MSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAG 247
+ + K + +VF ++ V Y + G L E+ F ++ +KN +N +++G
Sbjct: 279 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338
Query: 248 YVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----- 298
+ + + LFE M N +++++++ G G + + R+ F +M
Sbjct: 339 FAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP 398
Query: 299 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
+ V ++ ++ + G EA + I D + S + L++C LEL +
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTA---SIWGSLLASCRVYKNLELAE 452
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 147/312 (47%), Gaps = 23/312 (7%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
D+ NV++ Y + + AR++FD M ++ +VSWN M+ Y +N EA ++F +M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 111 HK----NAISWNGLLAAYVHNGRIEEA----CRLFDSKSDWELISWNCLMGGFVKRKMLG 162
++ + + + +L+A N E C + D L L+ + K M+
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 163 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYV 218
A ++F+ M + V+W++M++GY Q+ + +A L+ + S Q+ FT ++++
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 219 QNGMLDEARTFFDQMPQKNEISYNAMVAG-----YVQSNKMDMARELFEAMPSRNVSSWN 273
L E + + K+ N VA Y + + + +F + +N+ WN
Sbjct: 275 NLAALIEGKQ-MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWN 333
Query: 274 TMITGYGQNGDIAQARKLFDMMPQ----RDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
T+I+G+ ++ + LF+ M Q + V++++++S TG EE F ++
Sbjct: 334 TIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTT 393
Query: 330 -GESLNRSTFSC 340
G S N +SC
Sbjct: 394 YGLSPNVVHYSC 405
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
NR+ L CA A+ K HG++++ E + N L+ Y KCG + A VF
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 453
+G+ E+ +VSWNTMI Y R+ +AL +F M+ G K E T+ VLSAC
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG-VNCDA 178
Query: 454 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 513
+ + ++ + + T ++DL + G +++A + +M + + +W +++
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAG 237
Query: 514 SRIHGNTE 521
+ N E
Sbjct: 238 YVQNKNYE 245
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/532 (39%), Positives = 329/532 (61%), Gaps = 10/532 (1%)
Query: 186 YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISY 241
Y + + A+ + D+ P ++V +WTAM+S Y Q G EA T F +M + NE ++
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 242 NAMVAGYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGDIAQARKLFDMMPQ 297
++ ++++ + + +++ + N S ++++ Y + G I +AR++F+ +P+
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 298 RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI 357
RD VS AII+GYAQ G EEAL MF + +G S N T++ L+ + +A L+ GKQ
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 358 HGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFG 417
H V++ + N+L+ MY KCG++ A +F+ + E+ +SWN M+ GY++HG G
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 418 KQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTEYFYSM-NKDYSVTPSSKHY 475
++ L +F M+ VKPD +T++ VLS CSH + D G F M +Y P ++HY
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY 396
Query: 476 TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEP 535
C++D+LGRAGR++EA + ++ MP +P A G+LLGA R+H + ++GE + ++EP
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEP 456
Query: 536 HNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHP 595
N+G YV+LSNLYA++GRWAD N+R+ M V K G SW++ + +H F D HP
Sbjct: 457 ENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHP 516
Query: 596 EKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAG 655
++ + A ++E+ +KM++ GYV VL+DV+EE+KE ML HSEKLA+ FG++ G
Sbjct: 517 RREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEG 576
Query: 656 RPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
PIRV KNLR+C DCHN K SK+ R + LRD +RFH +GICSCGDYW
Sbjct: 577 IPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 195/438 (44%), Gaps = 46/438 (10%)
Query: 11 RVFNTMPRRSSVSYNAMISGYLRNARFSLAR-DLFDKMPQRDLVSWNVMLTGYVRNRRLG 69
R F++ P + IS N R A ++ P+ ++ +L + R L
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALR 69
Query: 70 DARRLFDSMPQKDVVSWN----AMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYV 125
D +R+ M + + +L Y + ++AR+V +MP KN +SW +++ Y
Sbjct: 70 DGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYS 129
Query: 126 HNGRIEEACRLFDS--KSDWEL--ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN- 180
G EA +F +SD + ++ ++ ++ LG +++ +V WN
Sbjct: 130 QTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL-----IVKWNY 184
Query: 181 --------TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
+++ YA+ G + +A+ +F+ P +DV + TA+++GY Q G+ +EA F +
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 233 MPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGD 284
+ + N ++Y +++ +D ++ + R + + N++I Y + G+
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 285 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL--NRSTFSCAL 342
++ AR+LFD MP+R +SW A++ GY++ G E L +F + RD + + + T L
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF-RLMRDEKRVKPDAVTLLAVL 363
Query: 343 STCADIAALELGKQIHGQVVKTGYET-------GCFVGNALLGMYFKCGSIGEANDVFEG 395
S C+ + G I +V Y T GC V M + G I EA + +
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIV-----DMLGRAGRIDEAFEFIKR 418
Query: 396 IEEKDVVSWNTMIAGYAR 413
+ K + G R
Sbjct: 419 MPSKPTAGVLGSLLGACR 436
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 174/386 (45%), Gaps = 69/386 (17%)
Query: 4 GHCD---SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD--------- 51
G CD A +V + MP ++ VS+ AMIS Y + S A +F +M + D
Sbjct: 98 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFA 157
Query: 52 ---------------------LVSWNV---------MLTGYVRNRRLGDARRLFDSMPQK 81
+V WN +L Y + ++ +AR +F+ +P++
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLA-----AYVHNGRIEE 132
DVVS A+++GYAQ G +EA E+F+++ + N +++ LL A + +G+ +
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK-QA 276
Query: 133 ACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDM 192
C + + + + N L+ + K L AR+LFD M R +SWN M+ GY++ G
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 193 SQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM------PQKNEISY 241
+ LF ++ D T A++SG M D FD M + Y
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY 396
Query: 242 NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQ---NGDIAQA--RKLFDMMP 296
+V ++ ++D A E + MPS+ + + G + + DI ++ R+L ++ P
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEP 456
Query: 297 QRDCVSWAAIISGYAQTGHYEEALNM 322
+ + ++ + + YA G + + N+
Sbjct: 457 E-NAGNYVILSNLYASAGRWADVNNV 481
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 292 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
F P + IS G +EAL +E+ G + + L+ C D AL
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
G+++H ++KT Y ++ LL Y KC + +A V + + EK+VVSW MI+ Y
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE---YFYSMNKDYSV 468
++ G +AL VF M KP+E T VL++C A + G + N D +
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 528
S ++D+ +AG+++EA+++ +P E S A++ + L E+A E
Sbjct: 189 FVGSS----LLDMYAKAGQIKEAREIFECLP-ERDVVSCTAIIAG---YAQLGLDEEALE 240
Query: 529 MVFKMEPHNSGM---YVLLSNLYAA 550
M ++ H+ GM YV ++L A
Sbjct: 241 MFHRL--HSEGMSPNYVTYASLLTA 263
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 355/611 (58%), Gaps = 18/611 (2%)
Query: 115 ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA----RKLFDK 170
IS N L+ + G++++A R+ +S ++ L+ R L A R + D
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 171 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 230
+D +I Y+ G + A+ +FD++ + ++ W A+ G +E +
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 231 DQM----PQKNEISYN----AMVAGYVQSNKMDMARELFEAMPSRNVSS----WNTMITG 278
+M + + +Y A VA N + +E+ + R SS T++
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE--SLNRS 336
Y + G + A +F MP R+ VSW+A+I+ YA+ G EAL F E+ R+ + S N
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 337 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 396
T L CA +AALE GK IHG +++ G ++ V +AL+ MY +CG + VF+ +
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM 346
Query: 397 EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 456
++DVVSWN++I+ Y HG+GK+A+ +FE M G P +T V VL ACSH GL++ G
Sbjct: 347 HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGK 406
Query: 457 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 516
F +M +D+ + P +HY CM+DLLGRA RL+EA ++++M EP WG+LLG+ RI
Sbjct: 407 RLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRI 466
Query: 517 HGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 576
HGN EL E+A+ +F +EP N+G YVLL+++YA + W + ++ + G+QK+ G
Sbjct: 467 HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRC 526
Query: 577 WVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHML 636
W+EV+ K++ F D F+P ++I+AFL +L M+ +GY+ TK VL+++E EEKE ++
Sbjct: 527 WMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIV 586
Query: 637 KYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHF 696
HSEKLA+AFG++ G PIR+ KNLR+CEDCH K ISK + + I++RD +RFH F
Sbjct: 587 LGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRF 646
Query: 697 NEGICSCGDYW 707
G+CSCGDYW
Sbjct: 647 KNGVCSCGDYW 657
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 158/377 (41%), Gaps = 52/377 (13%)
Query: 20 SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA----RRLF 75
+ +S N +I + + A + + ++ +++ L DA R +
Sbjct: 45 AKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHIL 104
Query: 76 DSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACR 135
D+ +D ++ Y+ G D AR+VF + + WN L A G EE
Sbjct: 105 DNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 136 LF------DSKSDW--------ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 181
L+ +SD ++ C + +K K + A L + + V T
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA--HLTRRGYSSHVYIMTT 222
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA-RTFFDQMPQKNEIS 240
++ YA+ G + A +F P ++V +W+AM++ Y +NG EA RTF + M + + S
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 241 YNA--------------------MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYG 280
N+ ++ GY+ +D + A ++T YG
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA-----------LVTMYG 331
Query: 281 QNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 340
+ G + +++FD M RD VSW ++IS Y G+ ++A+ +F E+ +G S TF
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 341 ALSTCADIAALELGKQI 357
L C+ +E GK++
Sbjct: 392 VLGACSHEGLVEEGKRL 408
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 134/277 (48%), Gaps = 33/277 (11%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLAAY 124
A +F MP ++VVSW+AM++ YA+NG A EA F +M N+++ +L A
Sbjct: 236 ASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Query: 125 VHNGRIEEA----CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN 180
+E+ + D L + L+ + + L +++FD+MH RDVVSWN
Sbjct: 296 ASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN 355
Query: 181 TMISGYAQDGDMSQAKNLFDQ------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
++IS Y G +A +F++ SP T+ +++ G+++E + F+ M
Sbjct: 356 SLISSYGVHGYGKKAIQIFEEMLANGASP--TPVTFVSVLGACSHEGLVEEGKRLFETMW 413
Query: 235 QKNEIS-----YNAMVAGYVQSNKMDMARELFEAM---PSRNVSSWNTMITGYGQNGDIA 286
+ + I Y MV ++N++D A ++ + M P V W +++ +G++
Sbjct: 414 RDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV--WGSLLGSCRIHGNVE 471
Query: 287 QA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
A R+LF + P ++ ++ + YA+ ++E
Sbjct: 472 LAERASRRLFALEP-KNAGNYVLLADIYAEAQMWDEV 507
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 56/281 (19%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARF--------SLARDLFDKMP----- 48
R G D A VF MP R+ VS++AMI+ Y +N + + R+ D P
Sbjct: 229 RFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTM 288
Query: 49 ------------------------QRDLVSW----NVMLTGYVRNRRLGDARRLFDSMPQ 80
+R L S + ++T Y R +L +R+FD M
Sbjct: 289 VSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD 348
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRL 136
+DVVSWN+++S Y +GY +A ++F +M A +++ +L A H G +EE RL
Sbjct: 349 RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Query: 137 F-----DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS-WNTMISGYAQDG 190
F D ++ + C++ + L A K+ M W +++ G
Sbjct: 409 FETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Query: 191 DMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
++ A + LF P ++ + + Y + M DE +
Sbjct: 469 NVELAERASRRLFALEP-KNAGNYVLLADIYAEAQMWDEVK 508
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/539 (40%), Positives = 326/539 (60%), Gaps = 11/539 (2%)
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----- 234
+ ++ Y + G A+ LFD+ P +D+ +W +++SGY G L + +M
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 235 -QKNEISYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQNGDIAQAR 289
+ NE+++ +M++ V + R + + V N I YG+ GD+ +
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSC 189
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
KLF+ + ++ VSW +I + Q G E+ L F +R G +++TF L +C D+
Sbjct: 190 KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMG 249
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 409
+ L + IHG ++ G+ + ALL +Y K G + +++ VF I D ++W M+A
Sbjct: 250 VVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLA 309
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 469
YA HGFG+ A+ FE M G+ PD +T +L+ACSH+GL++ G YF +M+K Y +
Sbjct: 310 AYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRID 369
Query: 470 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 529
P HY+CM+DLLGR+G L++A L++ MP EP + WGALLGA R++ +T+LG KAAE
Sbjct: 370 PRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAER 429
Query: 530 VFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTV 589
+F++EP + YV+LSN+Y+ASG W DA +R+ M+ G+ + +G S++E NKIHKF V
Sbjct: 430 LFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVV 489
Query: 590 GDCFHPEKDRIYAFLEELDLKMRRE-GYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFG 648
GD HPE ++I L+E+ KM+ E GY S T+ VLHDV E+ KE M+ HSEK+A+AFG
Sbjct: 490 GDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFG 549
Query: 649 ILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+L + PI + KNLR+C DCH K IS I R II+RDS RFHHF +G CSC DYW
Sbjct: 550 LLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 141/307 (45%), Gaps = 44/307 (14%)
Query: 67 RLGD---ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP------HKNAISW 117
RLG A +LFD MP++D+VSWN+++SGY+ GY + EV +M N +++
Sbjct: 78 RLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTF 137
Query: 118 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 177
+++A V+ G EE C+ G +K +L +V
Sbjct: 138 LSMISACVYGGSKEEG---------------RCIHGLVMKFGVL------------EEVK 170
Query: 178 SWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM---- 233
N I+ Y + GD++ + LF+ +++ +W M+ ++QNG+ ++ +F+
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVG 230
Query: 234 PQKNEISYNAMVAGYVQSNKMDMARELFEAMP----SRNVSSWNTMITGYGQNGDIAQAR 289
+ ++ ++ A++ + +A+ + + S N ++ Y + G + +
Sbjct: 231 HEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSS 290
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
+F + D ++W A+++ YA G +A+ F + G S + TF+ L+ C+
Sbjct: 291 TVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSG 350
Query: 350 ALELGKQ 356
+E GK
Sbjct: 351 LVEEGKH 357
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 152/391 (38%), Gaps = 71/391 (18%)
Query: 5 HCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR 64
HC +V ++ R + ++ YLR A LFD+MP+RDLVSWN +++GY
Sbjct: 54 HC----KVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSG 109
Query: 65 NRRLGDARRLFDSMPQKDV------VSWNAMLSGYAQNGYADEAREV------FYQMPHK 112
LG + M +V V++ +M+S G +E R + F +
Sbjct: 110 RGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEV 169
Query: 113 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNC-----LMGGFVKRKM------- 160
+ N + Y G + +C+LF+ S L+SWN L G ++ +
Sbjct: 170 KVV--NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSR 227
Query: 161 -----------LGAARKLFDKMHVRDVVSWNTMI-----SG-----------YAQDGDMS 193
L R D VR + +I SG Y++ G +
Sbjct: 228 RVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLE 287
Query: 194 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYV 249
+ +F + D WTAM++ Y +G +A F+ M + +++ ++
Sbjct: 288 DSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACS 347
Query: 250 QSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVS-W 303
S ++ + FE M R + ++ M+ G++G + A L MP W
Sbjct: 348 HSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVW 407
Query: 304 AAIISG---YAQTGHYEEALNMFIEIK-RDG 330
A++ Y T +A E++ RDG
Sbjct: 408 GALLGACRVYKDTQLGTKAAERLFELEPRDG 438
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEANDV 392
N S+ A+ +C I EL + +H +VVK+ Y G F+G+ L+G Y + G A +
Sbjct: 33 NVSSLIAAVKSCVSI---ELCRLLHCKVVKSVSYRHG-FIGDQLVGCYLRLGHDVCAEKL 88
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM--KTIGVKPDEITMVGVLSACSHAG 450
F+ + E+D+VSWN++I+GY+ G+ + V M +G +P+E+T + ++SAC + G
Sbjct: 89 FDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGG 148
Query: 451 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 510
+ G + + + V K I+ G+ G L + L ++ + SW +
Sbjct: 149 SKEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTM 206
Query: 511 LGASRIHGNTELGEKA 526
+ IH L EK
Sbjct: 207 I---VIHLQNGLAEKG 219
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 177/427 (41%), Gaps = 79/427 (18%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL------VS 54
+R GH A ++F+ MP R VS+N++ISGY ++ +M ++ V+
Sbjct: 77 LRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVT 136
Query: 55 WNVMLTGYVRNRRLGDARRL------FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 108
+ M++ V + R + F + + VV NA ++ Y + G + ++F
Sbjct: 137 FLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV--NAFINWYGKTGDLTSSCKLFED 194
Query: 109 MPHKNAISWNGLLAAYVHNGRIEEACRLFD---------SKSDWELISWNC--------- 150
+ KN +SWN ++ ++ NG E+ F+ ++ + + +C
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 151 -------LMGGFVKRKMLGAA--------------RKLFDKMHVRDVVSWNTMISGYAQD 189
+ GGF K + A +F ++ D ++W M++ YA
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH 314
Query: 190 GDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS----- 240
G A F+ H D T+T +++ +G+++E + +F+ M ++ I
Sbjct: 315 GFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDH 374
Query: 241 YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITGYGQNGD----IAQARKLFDMM 295
Y+ MV +S + A L + MP S W ++ D A +LF++
Sbjct: 375 YSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELE 434
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
P RD ++ + + Y+ +G +++A + +K+ G L + + +E G
Sbjct: 435 P-RDGRNYVMLSNIYSASGLWKDASRIRNLMKQKG-----------LVRASGCSYIEHGN 482
Query: 356 QIHGQVV 362
+IH VV
Sbjct: 483 KIHKFVV 489
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/633 (36%), Positives = 366/633 (57%), Gaps = 43/633 (6%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
RNG+ A +F M RS VS+ AMIS Y N + S A +FD+MP R S+N M+T
Sbjct: 62 RNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITA 121
Query: 62 YVRNR-RLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK--NAISWN 118
++N+ LG A LF +P+K+ VS+ M++G+ + G DEA ++ + P K ++++ N
Sbjct: 122 MIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASN 181
Query: 119 GLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS 178
LL+ Y+ G+ EA R+F + E++S + ++ G+ K + AR LFD+M R+V++
Sbjct: 182 VLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVIT 241
Query: 179 WNTMISGY----------------AQDGDM-----------------------SQAKNLF 199
W MI GY Q+GD+ SQ L
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV 301
Query: 200 DQSPHQ-DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMAR 258
+ P + D+F +++S Y + G + EA+ F M K+ +S+N+++ G VQ ++ A
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAY 361
Query: 259 ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 318
ELFE MP +++ SW MI G+ G+I++ +LF MMP++D ++W A+IS + G+YEE
Sbjct: 362 ELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEE 421
Query: 319 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 378
AL F ++ + N TFS LS A +A L G QIHG+VVK V N+L+
Sbjct: 422 ALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVS 481
Query: 379 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
MY KCG+ +A +F I E ++VS+NTMI+GY+ +GFGK+AL +F +++ G +P+ +T
Sbjct: 482 MYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
Query: 439 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
+ +LSAC H G +D G +YF SM Y++ P HY CM+DLLGR+G L++A +L+ M
Sbjct: 542 FLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Query: 499 PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAG 558
P +P + WG+LL AS+ H +L E AA+ + ++EP ++ YV+LS LY+ G+ D
Sbjct: 602 PCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCD 661
Query: 559 NMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD 591
+ + + ++K G SW+ ++ ++H F GD
Sbjct: 662 RIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGD 694
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 183/379 (48%), Gaps = 52/379 (13%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
+R G + A+RVF M + VS ++M+ GY + R AR LFD+M +R++++W M+
Sbjct: 188 LRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMID 247
Query: 61 GY-------------VRNRRLGDARR--------------------------LFDSMP-Q 80
GY +R R+ GD + L MP +
Sbjct: 248 GYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLE 307
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSK 140
D+ N+++S Y++ GY EA+ VF M +K+++SWN L+ V +I EA LF+
Sbjct: 308 FDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Query: 141 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD 200
+++SW ++ GF + + +LF M +D ++W MIS + +G +A F
Sbjct: 368 PGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFH 427
Query: 201 QSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS----YNAMVAGYVQSN 252
+ ++V +T+++++S L E ++ + N ++ N++V+ Y +
Sbjct: 428 KMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCG 487
Query: 253 KMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAIIS 308
+ A ++F + N+ S+NTMI+GY NG +A KLF M+ + + V++ A++S
Sbjct: 488 NTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLS 547
Query: 309 GYAQTGHYEEALNMFIEIK 327
G+ + F +K
Sbjct: 548 ACVHVGYVDLGWKYFKSMK 566
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 139/272 (51%), Gaps = 45/272 (16%)
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 239
N+ IS +A++G++ +A+ +F Q ++ + +W AM+S Y +NG + +A FD+MP +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 240 SYNAMVAGYVQSNKMDMAR--ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ 297
SYNAM+ ++ NK D+ + ELF +P +N S+ TMITG+ + G +A L+ P
Sbjct: 114 SYNAMITAMIK-NKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPV 172
Query: 298 --RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
RD V+ ++SGY + G + EA+ +F G ++ + SC+
Sbjct: 173 KFRDSVASNVLLSGYLRAGKWNEAVRVF-----QGMAV-KEVVSCS-------------S 213
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 415
+HG Y K G I +A +F+ + E++V++W MI GY + G
Sbjct: 214 MVHG--------------------YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAG 253
Query: 416 FGKQALMVFESMKTIG-VKPDEITMVGVLSAC 446
F + +F M+ G VK + T+ + AC
Sbjct: 254 FFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 39/239 (16%)
Query: 364 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMV 423
T T F N+ + + + G++ EA +F + + +VSW MI+ YA +G +A V
Sbjct: 44 TTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQV 103
Query: 424 FESMKT-IGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLL 482
F+ M + + + + + C + + E F + + +V+ Y MI
Sbjct: 104 FDEMPVRVTTSYNAMITAMIKNKCD----LGKAYELFCDIPEKNAVS-----YATMITGF 154
Query: 483 GRAGRLEEAQDLMRNMP--FEPPAASWGALLG-------------------------ASR 515
RAGR +EA+ L P F AS L G +S
Sbjct: 155 VRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSM 214
Query: 516 IHGNTELGE--KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 572
+HG ++G A + +M N + + + Y +G + D + RMR G KV
Sbjct: 215 VHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV 273
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/574 (38%), Positives = 338/574 (58%), Gaps = 37/574 (6%)
Query: 171 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 230
+H R V + YA G + + LF Q+ D+F +TA ++ NG+ D+A +
Sbjct: 59 LHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLY 118
Query: 231 DQM----PQKNEISYNAMVAG----------------------YVQSNKMDM-------- 256
Q+ NE ++++++ YV + +D+
Sbjct: 119 VQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVV 178
Query: 257 -ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 315
A+++F+ MP R++ S MIT Y + G++ AR LFD M +RD VSW +I GYAQ G
Sbjct: 179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGF 238
Query: 316 YEEALNMFIEIKRDGES-LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGN 374
+AL +F ++ +G+ + T ALS C+ I ALE G+ IH V + V
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCT 298
Query: 375 ALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI-GVK 433
L+ MY KCGS+ EA VF KD+V+WN MIAGYA HG+ + AL +F M+ I G++
Sbjct: 299 GLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQ 358
Query: 434 PDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQD 493
P +IT +G L AC+HAGL++ G F SM ++Y + P +HY C++ LLGRAG+L+ A +
Sbjct: 359 PTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYE 418
Query: 494 LMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGR 553
++NM + + W ++LG+ ++HG+ LG++ AE + + NSG+YVLLSN+YA+ G
Sbjct: 419 TIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGD 478
Query: 554 WADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRR 613
+ +R+ M++ G+ K G S +E++NK+H+F GD H + IY L ++ +++
Sbjct: 479 YEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKS 538
Query: 614 EGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNA 673
GYV +T VL D+EE EKE L+ HSE+LA+A+G+++ G P+++ KNLRVC DCH
Sbjct: 539 HGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTV 598
Query: 674 IKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
K ISKI GR I++RD +RFHHF +G CSCGD+W
Sbjct: 599 TKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 27/318 (8%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
++ Y + A+ +FD+MP+R LVS M+T Y + + AR LFDSM ++D+V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 85 SWNAMLSGYAQNGYADEAREVFYQM-----PHKNAISWNGLLAAYVHNGRIEEA--CRLF 137
SWN M+ GYAQ+G+ ++A +F ++ P + I+ L+A G +E +F
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 138 DSKSDWELISWNC--LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
S L C L+ + K L A +F+ +D+V+WN MI+GYA G A
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 196 KNLFDQ-------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNA 243
LF++ P F T + G+++E F+ M Q+ I Y
Sbjct: 345 LRLFNEMQGITGLQPTDITFIGTLQACAHA--GLVNEGIRIFESMGQEYGIKPKIEHYGC 402
Query: 244 MVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITGYGQNGDIAQARKLFDMMPQ---RD 299
+V+ ++ ++ A E + M S W++++ +GD +++ + + ++
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Query: 300 CVSWAAIISGYAQTGHYE 317
+ + + YA G YE
Sbjct: 463 SGIYVLLSNIYASVGDYE 480
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 16/221 (7%)
Query: 118 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 177
GL+ Y G + A ++FD + L+S ++ + K+ + AAR LFD M RD+V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 178 SWNTMISGYAQDGDMSQAKNLFDQ-----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
SWN MI GYAQ G + A LF + P D T A +S Q G L+ R +
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR-WIHV 283
Query: 233 MPQKNEISYNAMVAG-----YVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQ 287
+ + I N V Y + ++ A +F P +++ +WN MI GY +G
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQD 343
Query: 288 ARKLFDMMP-----QRDCVSWAAIISGYAQTGHYEEALNMF 323
A +LF+ M Q +++ + A G E + +F
Sbjct: 344 ALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIF 384
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/751 (32%), Positives = 400/751 (53%), Gaps = 86/751 (11%)
Query: 43 LFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEA 102
+ D + DL N ++ Y R L AR++FD MP +D+VSWN+++SGY+ +GY +EA
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 103 REVFYQM------PHKNAIS---------------------------------WNGLLAA 123
E+++++ P +S NGL+A
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 124 YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLF----DKM-------- 171
Y+ R +A R+FD + +S+N ++ G++K +M+ + ++F D+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVS 311
Query: 172 -------HVRDV-------------------VSWNTMISGYAQDGDMSQAKNLFDQSPHQ 205
H+RD+ N +I YA+ GDM A+++F+ +
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 206 DVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMAREL- 260
D +W +++SGY+Q+G L EA F M Q + I+Y +++ + + + L
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 431
Query: 261 ---FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 317
++ ++S N +I Y + G++ + K+F M D V+W +IS + G +
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491
Query: 318 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 377
L + ++++ + +TF L CA +AA LGK+IH +++ GYE+ +GNAL+
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
MY KCG + ++ VFE + +DVV+W MI Y +G G++AL F M+ G+ PD +
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
+ ++ ACSH+GL+D G F M Y + P +HY C++DLL R+ ++ +A++ ++
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQA 671
Query: 498 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADA 557
MP +P A+ W ++L A R G+ E E+ + + ++ P + G +L SN YAA +W
Sbjct: 672 MPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKV 731
Query: 558 GNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYV 617
+R ++D + K GYSW+EV +H F+ GD P+ + IY LE L M +EGY+
Sbjct: 732 SLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYI 791
Query: 618 SSTKLVLHDV-EEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKH 676
+ V ++ EEEEK ++ HSE+LA+AFG+L G P++V+KNLRVC DCH K
Sbjct: 792 PDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKL 851
Query: 677 ISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
ISKIVGR I++RD++RFH F +G CSC D W
Sbjct: 852 ISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 246/567 (43%), Gaps = 106/567 (18%)
Query: 79 PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD 138
P K+V WN+++ +++NG EA E FY ++ +S + Y I+ LFD
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALE-FYGKLRESKVSPD----KYTFPSVIKACAGLFD 121
Query: 139 SKS-------------DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 185
++ + +L N L+ + + +L AR++FD+M VRD+VSWN++ISG
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 186 YAQDGDMSQAKNLFDQSPHQ----DVFTWTA----------------------------- 212
Y+ G +A ++ + + D FT ++
Sbjct: 182 YSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSV 241
Query: 213 ------MVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELF----- 261
+V+ Y++ +AR FD+M ++ +SYN M+ GY++ ++ + +F
Sbjct: 242 VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD 301
Query: 262 EAMPS-RNVSSW--------------------------------NTMITGYGQNGDIAQA 288
+ P VSS N +I Y + GD+ A
Sbjct: 302 QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITA 361
Query: 289 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI 348
R +F+ M +D VSW +IISGY Q+G EA+ +F + E + T+ +S +
Sbjct: 362 RDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL 421
Query: 349 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 408
A L+ GK +H +K+G V NAL+ MY KCG +G++ +F + D V+WNT+I
Sbjct: 422 ADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVI 481
Query: 409 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 468
+ R G L V M+ V PD T + L C+ G E + + +
Sbjct: 482 SACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGY 540
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 528
+ +I++ + G LE + + M +W ++ A ++G GEKA E
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALE 596
Query: 529 MVFKMEPHNSGM----YVLLSNLYAAS 551
ME SG+ V ++ +YA S
Sbjct: 597 TFADME--KSGIVPDSVVFIAIIYACS 621
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 195/385 (50%), Gaps = 16/385 (4%)
Query: 182 MISGYAQDGDMSQAKNLFDQ-SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK---- 236
+I Y+ + + + ++F + SP ++V+ W +++ + +NG+ EA F+ ++ +
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 237 NEISYNAMV---AGYVQSNKMDMARE-LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF 292
++ ++ +++ AG + D+ E + + ++ N ++ Y + G + +AR++F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 293 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALE 352
D MP RD VSW ++ISGY+ G+YEEAL ++ E+K + T S L ++ ++
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 353 LGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYA 412
G+ +HG +K+G + V N L+ MY K +A VF+ ++ +D VS+NTMI GY
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 413 RHGFGKQAL-MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
+ ++++ M E++ KPD +T+ VL AC H + +Y Y+
Sbjct: 285 KLEMVEESVRMFLENLDQF--KPDLLTVSSVLRACGHLRDLSLA-KYIYNYMLKAGFVLE 341
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 531
S +ID+ + G + A+D+ +M + SW +++ G+ K +M+
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 532 KMEPHNSGMYVLLSNLYAASGRWAD 556
ME + L+ L + S R AD
Sbjct: 401 IMEEQADHITYLM--LISVSTRLAD 423
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/537 (41%), Positives = 317/537 (59%), Gaps = 38/537 (7%)
Query: 207 VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPS 266
+F +++ YV+ +L++A FDQMPQ+N IS+ M++ Y + A EL M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 267 RNVS-----------SWNTM-------------------------ITGYGQNGDIAQARK 290
NV S N M I + + G+ A
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 291 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 350
+FD M D + W +II G+AQ + AL +F +KR G ++T + L C +A
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 351 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 410
LELG Q H +VK Y+ + NAL+ MY KCGS+ +A VF ++E+DV++W+TMI+G
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 411 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 470
A++G+ ++AL +FE MK+ G KP+ IT+VGVL ACSHAGL++ G YF SM K Y + P
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 471 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 530
+HY CMIDLLG+AG+L++A L+ M EP A +W LLGA R+ N L E AA+ V
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 453
Query: 531 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 590
++P ++G Y LLSN+YA S +W +R+RMRD G++K G SW+EV +IH F +G
Sbjct: 454 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 513
Query: 591 DCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 650
D HP+ + L +L ++ GYV T VL D+E E+ E L++HSEKLA+AFG++
Sbjct: 514 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 573
Query: 651 TIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
T+P + IR+ KNLR+C DCH K SK+ R I++RD R+HHF +G CSCGDYW
Sbjct: 574 TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 56/337 (16%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR-----------------NRR 67
N +I+ Y++ + A LFD+MPQR+++SW M++ Y + N R
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 68 ---------------LGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQ 108
+ D R L + ++ DV +A++ +A+ G ++A VF +
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 109 MPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLF 168
M +AI WN ++ + N R + A LF I+ + ++ A +L
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 169 DKMHV------RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGM 222
+ HV +D++ N ++ Y + G + A +F+Q +DV TW+ M+SG QNG
Sbjct: 280 MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 223 LDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAM-------PSRNVSS 271
EA F++M + N I+ ++ + ++ F +M P R
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR--EH 397
Query: 272 WNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAII 307
+ MI G+ G + A KL + M + D V+W ++
Sbjct: 398 YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 123/281 (43%), Gaps = 52/281 (18%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ-------------- 49
G + AL VF+ M ++ +N++I G+ +N+R +A +LF +M +
Sbjct: 208 GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL 267
Query: 50 -----------------------RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSW 86
+DL+ N ++ Y + L DA R+F+ M ++DV++W
Sbjct: 268 RACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 327
Query: 87 NAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSD 142
+ M+SG AQNGY+ EA ++F +M N I+ G+L A H G +E+ F S
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 143 WELIS-----WNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMS--- 193
I + C++ K L A KL ++M D V+W T++ +M
Sbjct: 388 LYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAE 447
Query: 194 -QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 233
AK + P +D T+T + + Y + D +M
Sbjct: 448 YAAKKVIALDP-EDAGTYTLLSNIYANSQKWDSVEEIRTRM 487
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
+ +T+S + C A+ G I + G+ F+ N L+ MY K + +A+ +F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS------ 447
+ + +++V+SW TMI+ Y++ ++AL + M V+P+ T VL +C+
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 448 --HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 505
H G+I G E D V + +ID+ + G E+A + M A
Sbjct: 180 MLHCGIIKEGLE------SDVFVRSA------LIDVFAKLGEPEDALSVFDEM-VTGDAI 226
Query: 506 SWGALLG 512
W +++G
Sbjct: 227 VWNSIIG 233
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/619 (36%), Positives = 354/619 (57%), Gaps = 16/619 (2%)
Query: 105 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 164
+F N +N L+ +V+N E LF S L +K ++
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 165 RKLFDKMHV--------RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 216
RKL +H DV + +++S Y+ G ++ A LFD+ P + V TWTA+ SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 217 YVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMD----MARELFEAMPSRN 268
Y +G EA F +M + + +++ V +D + + + E +N
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 269 VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 328
T++ Y + G + +AR +FD M ++D V+W+ +I GYA +E + +F+++ +
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 329 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 388
+ ++ + LS+CA + AL+LG+ + + + T F+ NAL+ MY KCG++
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 389 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH 448
+VF+ ++EKD+V N I+G A++G K + VF + +G+ PD T +G+L C H
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 449 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 508
AGLI G +F +++ Y++ + +HY CM+DL GRAG L++A L+ +MP P A WG
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 509 ALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVG 568
ALL R+ +T+L E + + +EP N+G YV LSN+Y+ GRW +A +R M G
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKG 546
Query: 569 VQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVE 628
++K+ GYSW+E++ K+H+F D HP D+IYA LE+L +MR G+V +T+ V DVE
Sbjct: 547 MKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVE 606
Query: 629 EEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILR 688
EEEKE +L YHSEKLAVA G+++ G+ IRV+KNLRVC DCH +K ISKI R I++R
Sbjct: 607 EEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVR 666
Query: 689 DSHRFHHFNEGICSCGDYW 707
D++RFH F G CSC DYW
Sbjct: 667 DNNRFHCFTNGSCSCNDYW 685
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 148/359 (41%), Gaps = 78/359 (21%)
Query: 3 NGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP-------------- 48
+G + A ++F+ +P RS V++ A+ SGY + R A DLF KM
Sbjct: 159 SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQV 218
Query: 49 -------------------------QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV 83
Q++ ++ Y + ++ AR +FDSM +KD+
Sbjct: 219 LSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI 278
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAAYVHNGRI---EEACRL 136
V+W+ M+ GYA N + E E+F QM +N S G L++ G + E L
Sbjct: 279 VTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISL 338
Query: 137 FDSKSDW-ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
D L N L+ + K + ++F +M +D+V N ISG A++G + +
Sbjct: 339 IDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLS 398
Query: 196 KNLFDQSPH----QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS 251
+F Q+ D T+ ++ G V G++ + FF NA+ Y
Sbjct: 399 FAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF-----------NAISCVYAL- 446
Query: 252 NKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISG 309
R V + M+ +G+ G + A +L MP R + + W A++SG
Sbjct: 447 --------------KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/696 (35%), Positives = 379/696 (54%), Gaps = 39/696 (5%)
Query: 25 NAMISGYLRNARFSLAR--DLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD 82
NA+ + +R R AR D P L N ++ Y + AR + P ++
Sbjct: 15 NAISASSMRLGRVVHARIVKTLDSPPPPFLA--NYLINMYSKLDHPESARLVLRLTPARN 72
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSD 142
VVSW +++SG AQNG+ A F++M + + + + + RL +
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAF---KAVASLRLPVTGKQ 129
Query: 143 WELISWNCLMGGFVKRKMLG-AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 201
++ C G + +G +A ++ K +RD A+ LFD+
Sbjct: 130 IHALAVKC---GRILDVFVGCSAFDMYCKTRLRD------------------DARKLFDE 168
Query: 202 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMA 257
P +++ TW A +S V +G EA F + + N I++ A + +++
Sbjct: 169 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 258 REL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 313
+L + +VS N +I YG+ I + +F M ++ VSW ++++ Y Q
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 314 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 373
E+A +++ ++D + S LS CA +A LELG+ IH VK E FVG
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 374 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM--KTIG 431
+AL+ MY KCG I ++ F+ + EK++V+ N++I GYA G AL +FE M + G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 432 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 491
P+ +T V +LSACS AG ++ G + F SM Y + P ++HY+C++D+LGRAG +E A
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468
Query: 492 QDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 551
+ ++ MP +P + WGAL A R+HG +LG AAE +FK++P +SG +VLLSN +AA+
Sbjct: 469 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 528
Query: 552 GRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKM 611
GRWA+A +R ++ VG++K GYSW+ V+N++H F D H I L +L +M
Sbjct: 529 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 588
Query: 612 RREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCH 671
GY KL L+D+EEEEK + +HSEKLA+AFG+L++P PIR+ KNLR+C DCH
Sbjct: 589 EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCH 648
Query: 672 NAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+ K +S V R II+RD++RFH F +GICSC DYW
Sbjct: 649 SFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 168/383 (43%), Gaps = 92/383 (24%)
Query: 5 HCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV----------- 53
H +SA V P R+ VS+ ++ISG +N FS A F +M + +V
Sbjct: 57 HPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFK 116
Query: 54 ---SWNVMLTG-------------------------YVRNRRLGDARRLFDSMPQKDVVS 85
S + +TG Y + R DAR+LFD +P++++ +
Sbjct: 117 AVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLET 176
Query: 86 WNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAA---YVH-NGRIEEACRLF 137
WNA +S +G EA E F + H N+I++ L A ++H N ++ +
Sbjct: 177 WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 236
Query: 138 DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKN 197
S D ++ N L+ + K K + ++ +F +M ++ VSW ++++ Y Q+ + +A
Sbjct: 237 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 198 LFDQS---------------------------------------PHQDVFTWTAMVSGYV 218
L+ +S + +F +A+V Y
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYG 356
Query: 219 QNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM------PSRNVSSW 272
+ G ++++ FD+MP+KN ++ N+++ GY ++DMA LFE M P+ N ++
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 416
Query: 273 NTMITGYGQNGDIAQARKLFDMM 295
++++ + G + K+FD M
Sbjct: 417 VSLLSACSRAGAVENGMKIFDSM 439
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/436 (45%), Positives = 293/436 (67%), Gaps = 1/436 (0%)
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
N+++ Y GD+A A K+FD MP++D V+W ++I+G+A+ G EEAL ++ E+ G
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 333 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 392
+ T LS CA I AL LGK++H ++K G N LL +Y +CG + EA +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK-TIGVKPDEITMVGVLSACSHAGL 451
F+ + +K+ VSW ++I G A +GFGK+A+ +F+ M+ T G+ P EIT VG+L ACSH G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
+ G EYF M ++Y + P +H+ CM+DLL RAG++++A + +++MP +P W LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 512 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 571
GA +HG+++L E A + ++EP++SG YVLLSN+YA+ RW+D +R +M GV+K
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 572 VTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEE 631
V G+S VEV N++H+F +GD HP+ D IYA L+E+ ++R EGYV V DVEEEE
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 386
Query: 632 KEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSH 691
KE+ + YHSEK+A+AF +++ P PI V+KNLRVC DCH AIK +SK+ R I++RD
Sbjct: 387 KENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRS 446
Query: 692 RFHHFNEGICSCGDYW 707
RFHHF G CSC DYW
Sbjct: 447 RFHHFKNGSCSCQDYW 462
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 109/187 (58%), Gaps = 5/187 (2%)
Query: 348 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 407
+A + LG+ IH V+++G+ + +V N+LL +Y CG + A VF+ + EKD+V+WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 408 IAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 467
I G+A +G ++AL ++ M + G+KPD T+V +LSAC+ G + G M K
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VG 119
Query: 468 VTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAA 527
+T + ++DL R GR+EEA+ L M + + SW +L+ ++G G++A
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---FGKEAI 175
Query: 528 EMVFKME 534
E+ ME
Sbjct: 176 ELFKYME 182
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 19/248 (7%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK--- 112
N +L Y + A ++FD MP+KD+V+WN++++G+A+NG +EA ++ +M K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 113 -NAISWNGLLAAYVHNGRIEEACR----LFDSKSDWELISWNCLMGGFVKRKMLGAARKL 167
+ + LL+A G + R + L S N L+ + + + A+ L
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 168 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD-----VFTWTAMVSGYVQNGM 222
FD+M ++ VSW ++I G A +G +A LF + T+ ++ GM
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 223 LDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMI 276
+ E +F +M ++ +I + MV ++ ++ A E ++MP + NV W T++
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 277 TGYGQNGD 284
+GD
Sbjct: 267 GACTVHGD 274
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 50/243 (20%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ-------------- 49
G SA +VF+ MP + V++N++I+G+ N + A L+ +M
Sbjct: 37 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 96
Query: 50 -------------------------RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
R+L S NV+L Y R R+ +A+ LFD M K+ V
Sbjct: 97 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 156
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNA-----ISWNGLLAAYVHNGRIEEACRLF-- 137
SW +++ G A NG+ EA E+F M I++ G+L A H G ++E F
Sbjct: 157 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 216
Query: 138 ---DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMS 193
+ K + + + C++ + + A + M ++ +VV W T++ GD
Sbjct: 217 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 276
Query: 194 QAK 196
A+
Sbjct: 277 LAE 279
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 335/572 (58%), Gaps = 25/572 (4%)
Query: 161 LGAARKLFDKMHVRDVVSWNTMISGYAQ-DGDMSQ-AKNLF-----DQSPHQDVFTWTAM 213
L A K+F++M R+ SWNT+I G+++ D D + A LF D+ + FT+ ++
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 214 VSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELF-------- 261
+ + G + E + + +E + +V YV M AR LF
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 262 -EAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 315
M R + WN MI GY + GD AR LFD M QR VSW +ISGY+ G
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 316 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 375
+++A+ +F E+K+ N T L + + +LELG+ +H +G +G+A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 376 LLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 435
L+ MY KCG I +A VFE + ++V++W+ MI G+A HG A+ F M+ GV+P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 436 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLM 495
++ + +L+ACSH GL++ G YF M + P +HY CM+DLLGR+G L+EA++ +
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 496 RNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWA 555
NMP +P W ALLGA R+ GN E+G++ A ++ M PH+SG YV LSN+YA+ G W+
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 494
Query: 556 DAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREG 615
+ MR RM++ ++K G S +++ +H+F V D HP+ I + L E+ K+R G
Sbjct: 495 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 554
Query: 616 YVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIK 675
Y T VL ++EEE+KE++L YHSEK+A AFG+++ G+PIR++KNLR+CEDCH++IK
Sbjct: 555 YRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIK 614
Query: 676 HISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
ISK+ R I +RD RFHHF +G CSC DYW
Sbjct: 615 LISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 135/285 (47%), Gaps = 50/285 (17%)
Query: 284 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE--ALNMFIEIKRDG-ESLNRSTFSC 340
D+ A K+F+ MPQR+C SW II G++++ + A+ +F E+ D NR TF
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 341 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF-EGIEEK 399
L CA ++ GKQIHG +K G+ FV + L+ MY CG + +A +F + I EK
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 400 D--------------------------------------------VVSWNTMIAGYARHG 415
D VVSWNTMI+GY+ +G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 416 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 475
F K A+ VF MK ++P+ +T+V VL A S G ++ G E+ + +D +
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLG 312
Query: 476 TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 520
+ +ID+ + G +E+A + +P E +W A++ IHG
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHGQA 356
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 165/335 (49%), Gaps = 38/335 (11%)
Query: 27 MISGYLRNARFSLARDLFDK----MPQR-----DLVSWNVMLTGYVRNRRLGD---ARRL 74
++ G++++AR +++ +K M R ++V WNVM+ GY+R LGD AR L
Sbjct: 174 VMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR---LGDCKAARML 230
Query: 75 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRI 130
FD M Q+ VVSWN M+SGY+ NG+ +A EVF +M N ++ +L A G +
Sbjct: 231 FDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL 290
Query: 131 E--EACRLF--DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGY 186
E E L+ DS + + + L+ + K ++ A +F+++ +V++W+ MI+G+
Sbjct: 291 ELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGF 350
Query: 187 AQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-- 240
A G A + F + V + +++ G+++E R +F QM + +
Sbjct: 351 AIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPR 410
Query: 241 ---YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARK----LF 292
Y MV +S +D A E MP + + W ++ G++ ++ L
Sbjct: 411 IEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILM 470
Query: 293 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
DM+P D ++ A+ + YA G++ E M + +K
Sbjct: 471 DMVPH-DSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 192/449 (42%), Gaps = 89/449 (19%)
Query: 32 LRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRN--RRLGDARRLFDSMPQKDVVSWN-- 87
L + A +F++MPQR+ SWN ++ G+ + + A LF M + V N
Sbjct: 70 LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRF 129
Query: 88 ---AMLSGYAQNGYADEAREVFYQMPHKNAISW---------NGLLAAYVHNGRIEEACR 135
++L A+ G E +++ H A+ + + L+ YV G +++A
Sbjct: 130 TFPSVLKACAKTGKIQEGKQI-----HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARV 184
Query: 136 LF--------------DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 181
LF K D E++ WN ++ G+++ AAR LFDKM R VVSWNT
Sbjct: 185 LFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNT 244
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDV---------------------------------- 207
MISGY+ +G A +F + D+
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 208 -----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFE 262
+A++ Y + G++++A F+++P++N I+++AM+ G+ + A + F
Sbjct: 305 IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 263 AMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDCVS-----WAAIISGYAQT 313
M V ++ ++T G + + R+ F M D + + ++ ++
Sbjct: 365 KMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRS 424
Query: 314 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK-TGYETGCFV 372
G +EA + + + + + L C +E+GK++ ++ +++G +V
Sbjct: 425 GLLDEAEEFILNMPIKPDDV---IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYV 481
Query: 373 GNALLGMYFKCGSIGEANDVFEGIEEKDV 401
AL MY G+ E +++ ++EKD+
Sbjct: 482 --ALSNMYASQGNWSEVSEMRLRMKEKDI 508
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 168/386 (43%), Gaps = 76/386 (19%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRN--ARFSLARDLFDKMPQRDLVSWNV------- 57
D A ++FN MP+R+ S+N +I G+ + + +A LF +M + V N
Sbjct: 76 DYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVL 135
Query: 58 ---------------------------------MLTGYVRNRRLGDARRLF-DSMPQKD- 82
++ YV + DAR LF ++ +KD
Sbjct: 136 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 195
Query: 83 ------------VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 130
+V WN M+ GY + G AR +F +M ++ +SWN +++ Y NG
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 131 EEACRLFDSKSDWEL-ISWNCLMGGFVKRKMLGAARKLFDKMHVR--------DVVSWNT 181
++A +F ++ ++ L+ LG+ +L + +H+ D V +
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL-ELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KN 237
+I Y++ G + +A ++F++ P ++V TW+AM++G+ +G +A F +M Q +
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 238 EISYNAMVAGYVQSNKMDMARELFEAMPSRN-----VSSWNTMITGYGQNGDIAQARKLF 292
+++Y ++ ++ R F M S + + + M+ G++G + +A +
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 293 DMMPQR-DCVSWAAIISGYAQTGHYE 317
MP + D V W A++ G+ E
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVE 460
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/607 (37%), Positives = 335/607 (55%), Gaps = 50/607 (8%)
Query: 151 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF------DQSPH 204
LM + K + +ARK+FD++ R+V+ N MI Y +G + +F + P
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 205 Q---------------------------------DVFTWTAMVSGYVQNGMLDEARTFFD 231
+F +VS Y + G L EAR D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 232 QMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNG--DI 285
+M +++ +S+N++V GY Q+ + D A E+ M S +S + +++ ++
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 286 AQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTC 345
+ +F M ++ VSW +I Y + EA+ ++ ++ DG + + + L C
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 346 ADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWN 405
D +AL LGK+IHG + + + NAL+ MY KCG + +A DVFE ++ +DVVSW
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 406 TMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKD 465
MI+ Y G G A+ +F ++ G+ PD I V L+ACSHAGL++ G F M
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 466 YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEK 525
Y +TP +H CM+DLLGRAG+++EA +++M EP WGALLGA R+H +T++G
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 526 AAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIH 585
AA+ +F++ P SG YVLLSN+YA +GRW + N+R+ M+ G++K G S VEV IH
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 586 KFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAV 645
F VGD HP+ D IY L+ L KM+ GYV ++ LHDVEEE+KE L HSEKLA+
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619
Query: 646 AFGILTIP-----AGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGI 700
F ++ + IR+ KNLR+C DCH A K IS+I R II+RD++RFH F G+
Sbjct: 620 VFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGV 679
Query: 701 CSCGDYW 707
CSCGDYW
Sbjct: 680 CSCGDYW 686
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 168/457 (36%), Gaps = 132/457 (28%)
Query: 8 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQR----------- 50
SA +VF+ +P R+ + N MI Y+ N + +F M P
Sbjct: 92 SARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS 151
Query: 51 ----------------------DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNA 88
L N +++ Y + L +AR + D M ++DVVSWN+
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNS 211
Query: 89 MLSGYAQNGYADEAREV-------------------------------------FYQMPH 111
++ GYAQN D+A EV F++M
Sbjct: 212 LVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGK 271
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLF----------DSKS---------DWELISWNCLM 152
K+ +SWN ++ Y+ N EA L+ D+ S D +S +
Sbjct: 272 KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
Query: 153 GGFVKRK--------------------MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDM 192
G+++RK L AR +F+ M RDVVSW MIS Y G
Sbjct: 332 HGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRG 391
Query: 193 SQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNA 243
A LF D D + ++ G+L+E R+ F M +I+
Sbjct: 392 CDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLAC 451
Query: 244 MVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGD----IAQARKLFDMMPQR 298
MV ++ K+ A + M N W ++ + D + A KLF + P++
Sbjct: 452 MVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQ 511
Query: 299 DCVSWAAIISG-YAQTGHYEEALNMFIEIKRDGESLN 334
+ ++S YA+ G +EE N+ +K G N
Sbjct: 512 S--GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 341 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKD 400
L T DI L + +H +++ +G L+ Y + A VF+ I E++
Sbjct: 48 VLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN 104
Query: 401 VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFY 460
V+ N MI Y +GF + + VF +M V+PD T VL ACS +G I G +
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 461 SMNKDYSVTPSSKHYT--CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
S K V SS + ++ + G+ G L EA+ ++ M SW +L+
Sbjct: 165 SATK---VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLV 213
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/557 (38%), Positives = 340/557 (61%), Gaps = 9/557 (1%)
Query: 160 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQS------PHQDVFTWTAM 213
+LG A +F ++ ++ +N +I ++ + S+A + Q P F +
Sbjct: 66 LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 214 VSGYVQNGMLDE-ARTFFDQMPQKNEISY-NAMVAGYVQSNKMDMARELFEAMPSRNVSS 271
S ++ ++ E + + +N++ N++V Y + A +F M R+V S
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 331
W +M+ GY + G + AR++FD MP R+ +W+ +I+GYA+ +E+A+++F +KR+G
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
N + +S+CA + ALE G++ + VVK+ +G AL+ M+++CG I +A
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 392 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
VFEG+ E D +SW+++I G A HG +A+ F M ++G P ++T VLSACSH GL
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
+++G E + +M KD+ + P +HY C++D+LGRAG+L EA++ + M +P A GALL
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 512 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 571
GA +I+ NTE+ E+ M+ K++P +SG YVLLSN+YA +G+W ++R M++ V+K
Sbjct: 426 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 572 VTGYSWVEVQNKIHKFTVG-DCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEE 630
G+S +E+ KI+KFT+G D HPE +I EE+ K+R GY +T DV+EE
Sbjct: 486 PPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEE 545
Query: 631 EKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDS 690
EKE + HSEKLA+A+G++ G IR++KNLRVCEDCH K IS++ GR +I+RD
Sbjct: 546 EKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDR 605
Query: 691 HRFHHFNEGICSCGDYW 707
+RFHHF G+CSC DYW
Sbjct: 606 NRFHHFRNGVCSCRDYW 622
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 165/342 (48%), Gaps = 19/342 (5%)
Query: 68 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 127
LG A +F + ++ +N ++ ++ +A + QM K+ I + + ++
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQML-KSRIWPDNITFPFLIK 125
Query: 128 GRIEEACRLFDSKSDWELISW---------NCLMGGFVKRKMLGAARKLFDKMHVRDVVS 178
E C L ++ +++ + N L+ + + AA ++F +M RDVVS
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185
Query: 179 WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE 238
W +M++GY + G + A+ +FD+ PH+++FTW+ M++GY +N ++A F+ M ++
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 239 ISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNT--------MITGYGQNGDIAQARK 290
++ ++ + S A E E V S T ++ + + GDI +A
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 291 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 350
+F+ +P+ D +SW++II G A GH +A++ F ++ G TF+ LS C+
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 351 LELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEAND 391
+E G +I+ + K G E ++ M + G + EA +
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAEN 407
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 146/317 (46%), Gaps = 24/317 (7%)
Query: 49 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 108
Q D+ N ++ Y + A R+F M +DVVSW +M++GY + G + ARE+F +
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 109 MPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKR-KMLGA---- 163
MPH+N +W+ ++ Y N E+A LF+ +++ +M + LGA
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 164 --ARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN 220
A + K H+ +++ ++ + + GD+ +A ++F+ P D +W++++ G +
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH 328
Query: 221 GMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRN-----VSS 271
G +A +F QM ++++ A+++ ++ E++E M + +
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEH 388
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG----YAQTGHYEEALNMFIEIK 327
+ ++ G+ G +A+A M + + G Y T E NM I++K
Sbjct: 389 YGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVK 448
Query: 328 RDGES---LNRSTFSCA 341
+ L + ++CA
Sbjct: 449 PEHSGYYVLLSNIYACA 465
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 37/245 (15%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G +A R+F M R VS+ +M++GY + AR++FD+MP R+L +W++M+ GY
Sbjct: 166 GFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYA 225
Query: 64 RNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAA 123
+N A LF+ M ++ VV+ N ++++
Sbjct: 226 KNNCFEKAIDLFEFMKREGVVA---------------------------NETVMVSVISS 258
Query: 124 YVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 179
H G +E R ++ S LI L+ F + + A +F+ + D +SW
Sbjct: 259 CAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSW 318
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPH-----QDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
+++I G A G +A + F Q +DV T+TA++S G++++ ++ M
Sbjct: 319 SSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDV-TFTAVLSACSHGGLVEKGLEIYENMK 377
Query: 235 QKNEI 239
+ + I
Sbjct: 378 KDHGI 382
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 260/840 (30%), Positives = 407/840 (48%), Gaps = 139/840 (16%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF-------DKMPQ------- 49
G D + VF+ + ++ +NA+IS Y RN + + F D +P
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 193
Query: 50 --------------------------RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV 83
D+ N +++ Y + + DA +LFD MP++++
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMPHKNA-----ISWNGLLAAYVHNGRIEE------ 132
VSWN+M+ ++ NG+++E+ + +M +N L+ R E
Sbjct: 254 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 133 ----ACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQ 188
A +L + D EL+ N LM + K + A+ +F + ++VVSWNTM+ G++
Sbjct: 314 VHGWAVKL---RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 189 DGD-------------------------------------MSQAKNLFDQSPHQDV---- 207
+GD + K L S Q+
Sbjct: 371 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 430
Query: 208 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP-- 265
A V+ Y + G L A+ F + K S+NA++ G+ QSN ++ + M
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 490
Query: 266 -------------------------------------SRNVSSWNTMITGYGQNGDIAQA 288
R++ + ++++ Y G++
Sbjct: 491 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 550
Query: 289 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI 348
+ LFD M + VSW +I+GY Q G + AL +F ++ G L + C+ +
Sbjct: 551 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 610
Query: 349 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 408
+L LG++ H +K E F+ +L+ MY K GSI +++ VF G++EK SWN MI
Sbjct: 611 PSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
Query: 409 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 468
GY HG K+A+ +FE M+ G PD++T +GVL+AC+H+GLI G Y M + +
Sbjct: 671 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 730
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLM-RNMPFEPPAASWGALLGASRIHGNTELGEKAA 527
P+ KHY C+ID+LGRAG+L++A ++ M E W +LL + RIH N E+GEK A
Sbjct: 731 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 790
Query: 528 EMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKF 587
+F++EP YVLLSNLYA G+W D +R RM ++ ++K G SW+E+ K+ F
Sbjct: 791 AKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF 850
Query: 588 TVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAF 647
VG+ F + I + L++K+ + GY T V HD+ EEEK L+ HSEKLA+ +
Sbjct: 851 VVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTY 910
Query: 648 GILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
G++ G IRV KNLR+C DCHNA K ISK++ R I++RD+ RFHHF G+CSCGDYW
Sbjct: 911 GLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 187/416 (44%), Gaps = 40/416 (9%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW 117
++T Y D+R +FD++ K++ WNA++S Y++N DE E F +M IS
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM-----IST 180
Query: 118 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 177
LL + + +AC SD + + G V + L V DV
Sbjct: 181 TDLLPDHFTYPCVIKACA---GMSD---VGIGLAVHGLVVKTGL-----------VEDVF 223
Query: 178 SWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN 237
N ++S Y G ++ A LFD P +++ +W +M+ + NG +E+ +M ++N
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Query: 238 -EISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW-------------NTMITGYGQNG 283
+ ++ VA V + ARE E + V W N ++ Y + G
Sbjct: 284 GDGAFMPDVATLVTVLPV-CARER-EIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 341
Query: 284 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL--NRSTFSCA 341
I A+ +F M ++ VSW ++ G++ G ++ ++ GE + + T A
Sbjct: 342 CITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNA 401
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
+ C + L K++H +K + V NA + Y KCGS+ A VF GI K V
Sbjct: 402 VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTV 461
Query: 402 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
SWN +I G+A+ + +L MK G+ PD T+ +LSACS + G E
Sbjct: 462 NSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 165/355 (46%), Gaps = 19/355 (5%)
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
D V +I+ YA G ++ +FD +++F W A++S Y +N + DE F +M
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 235 QKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQNGDI 285
++ +Y ++ + + + + + +V N +++ YG +G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 286 AQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA---LNMFIEIKRDGESL-NRSTFSCA 341
A +LFD+MP+R+ VSW ++I ++ G EE+ L +E DG + + +T
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
L CA + LGK +HG VK + + NAL+ MY KCG I A +F+ K+V
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 402 VSWNTMIAGYARHGFGKQALMVFESMKTIG--VKPDEITMVGVLSACSHAGLIDRGTE-Y 458
VSWNTM+ G++ G V M G VK DE+T++ + C H + E +
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 418
Query: 459 FYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 513
YS+ +++ + + + G L AQ + + SW AL+G
Sbjct: 419 CYSLKQEFVYNELVAN--AFVASYAKCGSLSYAQRVFHGIR-SKTVNSWNALIGG 470
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 129/254 (50%), Gaps = 13/254 (5%)
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL- 333
+IT Y G +R +FD + ++ W A+IS Y++ Y+E L FIE+ + L
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
+ T+ C + CA ++ + +G +HG VVKTG FVGNAL+ Y G + +A +F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVF-ESMKTIG---VKPDEITMVGVLSACSHA 449
+ + E+++VSWN+MI ++ +GF +++ ++ E M+ G PD T+V VL C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 450 GLIDRGT---EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 506
I G + + D + ++ ++D+ + G + AQ + + M S
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNA----LMDMYSKCGCITNAQMIFK-MNNNKNVVS 360
Query: 507 WGALLGASRIHGNT 520
W ++G G+T
Sbjct: 361 WNTMVGGFSAEGDT 374
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/536 (41%), Positives = 340/536 (63%), Gaps = 9/536 (1%)
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 239
N +I+ Y++ ++ F+ SP + TW++++S + QN + + F +M N
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR 113
Query: 240 SYNAMVAGYVQS----NKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKL 291
+ ++ +S ++ D+ R + + +V ++++ Y + G+I ARK+
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKM 173
Query: 292 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
FD MPQR+ V+W+ ++ GYAQ G EEAL +F E + ++N +FS +S CA+ L
Sbjct: 174 FDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLL 233
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
ELG+QIHG +K+ +++ FVG++L+ +Y KCG A VF + K++ WN M+ Y
Sbjct: 234 ELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAY 293
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
A+H ++ + +F+ MK G+KP+ IT + VL+ACSHAGL+D G YF M K+ + P+
Sbjct: 294 AQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPT 352
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 531
KHY ++D+LGRAGRL+EA +++ NMP +P + WGALL + +H NTEL AA+ VF
Sbjct: 353 DKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVF 412
Query: 532 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD 591
++ P +SGM++ LSN YAA GR+ DA R +RD G +K TG SWVE +NK+H F G+
Sbjct: 413 ELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGE 472
Query: 592 CFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILT 651
H + IY L EL +M + GY++ T VL +V+ +EK ++YHSE+LA+AFG++T
Sbjct: 473 RRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLIT 532
Query: 652 IPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
PA RPIRV+KNLRVC DCHNAIK +S R+II+RD++RFH F +G CSC DYW
Sbjct: 533 FPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 176/388 (45%), Gaps = 34/388 (8%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
N ++ Y +++ D+RR F+ PQK +W++++S +AQN + E +M N
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR 113
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 175
+ +L + + I C + S +CL + + +D D
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSV--------HCL-----------SMKTGYDA----D 150
Query: 176 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
V ++++ YA+ G++ A+ +FD+ P ++V TW+ M+ GY Q G +EA F +
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 236 K----NEISYNAMVAGYVQSNKMDMARELF----EAMPSRNVSSWNTMITGYGQNGDIAQ 287
+ N+ S++++++ S +++ R++ ++ + +++++ Y + G
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 288 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 347
A ++F+ +P ++ W A++ YAQ H ++ + +F +K G N TF L+ C+
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 348 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS-WNT 406
++ G+ Q+ ++ E +L+ M + G + EA +V + S W
Sbjct: 331 AGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 407 MIAGYARHGFGKQALMVFESMKTIGVKP 434
++ H L F + K + P
Sbjct: 391 LLTSCTVH--KNTELAAFAADKVFELGP 416
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEA----REVFYQMPHKNAISWNGLLAAYVH 126
AR++FD MPQ++VV+W+ M+ GYAQ G +EA +E ++ N S++ +++ +
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCAN 229
Query: 127 NGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 182
+ +E ++ S D + L+ + K + A ++F+++ V+++ WN M
Sbjct: 230 STLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAM 289
Query: 183 ISGYAQDGDMSQAKNLFDQSP----HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-- 236
+ YAQ + LF + + T+ +++ G++DE R +FDQM +
Sbjct: 290 LKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRI 349
Query: 237 --NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITG--YGQNGDIA--QAR 289
+ Y ++V ++ ++ A E+ MP S W ++T +N ++A A
Sbjct: 350 EPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAAD 409
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
K+F++ P + ++ + YA G +E+A
Sbjct: 410 KVFELGPVSSGMH-ISLSNAYAADGRFEDA 438
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 333/557 (59%), Gaps = 11/557 (1%)
Query: 161 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ-----SPHQDVFTWTAMVS 215
L A+ +FD D WN MI G++ + ++ L+ + +PH + +T+ +++
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLK 123
Query: 216 GYVQNGMLDEARTFFDQMPQ---KNEI-SYNAMVAGYVQSNKMDMARELFEAMPSRNVSS 271
+E Q+ + +N++ + N+++ Y + +A LF+ +P + S
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 331
WN++I GY + G + A LF M +++ +SW +ISGY Q +EAL +F E++
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
+ + + ALS CA + ALE GK IH + KT +G L+ MY KCG + EA +
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 392 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
VF+ I++K V +W +I+GYA HG G++A+ F M+ +G+KP+ IT VL+ACS+ GL
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
++ G FYSM +DY++ P+ +HY C++DLLGRAG L+EA+ ++ MP +P A WGALL
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Query: 512 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 571
A RIH N ELGE+ E++ ++P++ G YV +N++A +W A R M++ GV K
Sbjct: 424 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483
Query: 572 VTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD-VEEE 630
V G S + ++ H+F GD HPE ++I + + K+ GYV + +L D V+++
Sbjct: 484 VPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 543
Query: 631 EKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDS 690
E+E ++ HSEKLA+ +G++ G IR++KNLRVC+DCH K ISKI R I++RD
Sbjct: 544 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 603
Query: 691 HRFHHFNEGICSCGDYW 707
RFHHF +G CSCGDYW
Sbjct: 604 TRFHHFRDGKCSCGDYW 620
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 173/368 (47%), Gaps = 30/368 (8%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM-----PHKNAISWNGLLAAYV 125
A+ +FD + D WN M+ G++ + + + ++ +M PH NA ++ LL A
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACS 126
Query: 126 HNGRIEEACRLFD--SKSDWE--LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 181
+ EE ++ +K +E + + N L+ + A LFD++ D VSWN+
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKN 237
+I GY + G M A LF + ++ +WT M+SGYVQ M EA F +M + +
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 238 EISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN----TMITGYGQNGDIAQARKLFD 293
+S ++ Q ++ + + + + + +I Y + G++ +A ++F
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 294 MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALEL 353
+ ++ +W A+ISGYA GH EA++ F+E+++ G N TF+ L+ C+ +E
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 354 GKQIHGQVVK------TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNT 406
GK I + + T GC V LLG + G + EA + + K + V W
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVD--LLG---RAGLLDEAKRFIQEMPLKPNAVIWGA 421
Query: 407 MIAGYARH 414
++ H
Sbjct: 422 LLKACRIH 429
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 138/300 (46%), Gaps = 43/300 (14%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
N++I+ Y F LA LFD++P+ D VSWN ++ GYV+ ++ A LF M +K+ +
Sbjct: 154 NSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI 213
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLFDSK 140
SW M+SGY Q EA ++F++M + + +S L+A G +E+
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG------- 266
Query: 141 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLF 199
W +K +R D V +I YA+ G+M +A +F
Sbjct: 267 ------KW---------------IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 200 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMD 255
+ V WTA++SGY +G EA + F +M + N I++ A++ + ++
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 256 MARELFEAMP-----SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISG 309
+ +F +M + + ++ G+ G + +A++ MP + + V W A++
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 131/272 (48%), Gaps = 20/272 (7%)
Query: 12 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 71
+F+ +P VS+N++I GY++ + +A LF KM +++ +SW M++GYV+ +A
Sbjct: 172 LFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEA 231
Query: 72 RRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAA---- 123
+LF M DV VS LS AQ G ++ + + + +K I + +L
Sbjct: 232 LQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI-HSYLNKTRIRMDSVLGCVLID 290
Query: 124 -YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLF---DKMHVR-DVVS 178
Y G +EEA +F + + +W L+ G+ A F KM ++ +V++
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 179 WNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 233
+ +++ + G + + K +F D + + + +V + G+LDEA+ F +M
Sbjct: 351 FTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Query: 234 PQK-NEISYNAMVAGYVQSNKMDMARELFEAM 264
P K N + + A++ +++ E+ E +
Sbjct: 411 PLKPNAVIWGALLKACRIHKNIELGEEIGEIL 442
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 58/275 (21%)
Query: 337 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS---IGEANDVF 393
T SC L C+ L KQIH +++KTG + L S + A VF
Sbjct: 17 TMSC-LQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS------ 447
+G + D WN MI G++ +++L++++ M + T +L ACS
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 448 -----HAGLIDRGTEY-FYSMNK---DYSVT---------------PSSKHYTCMIDLLG 483
HA + G E Y++N Y+VT P + +I
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 484 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM-----EPHNS 538
+AG+++ A L R M E A SW ++ + ++ ++A ++ +M EP N
Sbjct: 193 KAGKMDIALTLFRKMA-EKNAISWTTMISG---YVQADMNKEALQLFHEMQNSDVEPDN- 247
Query: 539 GMYVLLSNLYAA--------SGRWADAGNMRSRMR 565
V L+N +A G+W + ++R+R
Sbjct: 248 ---VSLANALSACAQLGALEQGKWIHSYLNKTRIR 279
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/503 (42%), Positives = 311/503 (61%), Gaps = 2/503 (0%)
Query: 207 VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPS 266
+F T ++ Y G ++ AR FD+M Q N +++NA++ + N + ARE+F+ M
Sbjct: 141 LFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLV 200
Query: 267 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 326
RN +SWN M+ GY + G++ A+++F MP RD VSW+ +I G A G + E+ F E+
Sbjct: 201 RNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFREL 260
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
+R G S N + + LS C+ + E GK +HG V K GY V NAL+ MY +CG++
Sbjct: 261 QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNV 320
Query: 387 GEANDVFEGIEEKD-VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 445
A VFEG++EK +VSW +MIAG A HG G++A+ +F M GV PD I+ + +L A
Sbjct: 321 PMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHA 380
Query: 446 CSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 505
CSHAGLI+ G +YF M + Y + P +HY CM+DL GR+G+L++A D + MP P A
Sbjct: 381 CSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAI 440
Query: 506 SWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMR 565
W LLGA HGN EL E+ + + +++P+NSG VLLSN YA +G+W D ++R M
Sbjct: 441 VWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMI 500
Query: 566 DVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE-GYVSSTKLVL 624
++K T +S VEV ++KFT G+ + L+E+ L+++ E GY L
Sbjct: 501 VQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASAL 560
Query: 625 HDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRL 684
+DVEEEEKE + HSEKLA+AF + + G IR++KNLR+C DCH +K SK+ G
Sbjct: 561 YDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVE 620
Query: 685 IILRDSHRFHHFNEGICSCGDYW 707
I++RD +RFH F +G CSC DYW
Sbjct: 621 ILVRDRNRFHSFKDGSCSCRDYW 643
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 180/401 (44%), Gaps = 61/401 (15%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN--- 127
ARRL P+ D +N ++ GY+++ + VF +M K + + A+V
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 128 -------------------------------------GRIEEACRLFDSKSDWELISWNC 150
G +E A ++FD L++WN
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 151 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW 210
++ + + AR++FDKM VR+ SWN M++GY + G++ AK +F + PH+D +W
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 237
Query: 211 TAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELF----E 262
+ M+ G NG +E+ +F ++ + NE+S +++ QS + + L +
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 297
Query: 263 AMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC-VSWAAIISGYAQTGHYEEALN 321
A S VS N +I Y + G++ AR +F+ M ++ C VSW ++I+G A G EEA+
Sbjct: 298 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Query: 322 MFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY------ETGCFVGNA 375
+F E+ G + + +F L C+ +E G+ ++ + + GC V
Sbjct: 358 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMV--- 414
Query: 376 LLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHG 415
+Y + G + +A D + + W T++ + HG
Sbjct: 415 --DLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHG 453
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 171/343 (49%), Gaps = 26/343 (7%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G + A +VF+ M + + V++NA+I+ R + AR++FDKM R+ SWNVML GY+
Sbjct: 155 GCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYI 214
Query: 64 RNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH----KNAISWNG 119
+ L A+R+F MP +D VSW+ M+ G A NG +E+ F ++ N +S G
Sbjct: 215 KAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTG 274
Query: 120 LLAAYVHNGRIEEACRL--FDSKS--DWELISWNCLMGGFVKRKMLGAARKLFDKMH-VR 174
+L+A +G E L F K+ W + N L+ + + + AR +F+ M R
Sbjct: 275 VLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKR 334
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQ------SPHQDVFTWTAMVSGYVQNGMLDEART 228
+VSW +MI+G A G +A LF++ +P D ++ +++ G+++E
Sbjct: 335 CIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTP--DGISFISLLHACSHAGLIEEGED 392
Query: 229 FFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVS-SWNTMITGYGQN 282
+F +M + I Y MV Y +S K+ A + MP + W T++ +
Sbjct: 393 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSH 452
Query: 283 GDIAQARKLFDMMPQRDCVSWAAII---SGYAQTGHYEEALNM 322
G+I A ++ + + D + ++ + YA G +++ ++
Sbjct: 453 GNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASI 495
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 136/350 (38%), Gaps = 100/350 (28%)
Query: 251 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 310
S+ + AR L P + +NT++ GY ++ + P
Sbjct: 52 SDALPYARRLLLCFPEPDAFMFNTLVRGYSESDE-----------PHN------------ 88
Query: 311 AQTGHYEEALNMFIEIKRDGESLNRS-TFSCALSTCADIAALELGKQIHGQVVKTGYETG 369
++ +F+E+ R G S +F+ + + +L G Q+H Q +K G E+
Sbjct: 89 --------SVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESH 140
Query: 370 CFVGNALLGMYFKCGSIGEANDVFEGIEEKDVV--------------------------- 402
FVG L+GMY CG + A VF+ + + ++V
Sbjct: 141 LFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLV 200
Query: 403 ----SWNTMIAGY-------------------------------ARHGFGKQALMVFESM 427
SWN M+AGY A +G ++ + F +
Sbjct: 201 RNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFREL 260
Query: 428 KTIGVKPDEITMVGVLSACSHAGLIDRG-TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAG 486
+ G+ P+E+++ GVLSACS +G + G + + YS S + +ID+ R G
Sbjct: 261 QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN--ALIDMYSRCG 318
Query: 487 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 536
+ A+ + M + SW +++ +HG GE+A + +M +
Sbjct: 319 NVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQ---GEEAVRLFNEMTAY 365
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 134/327 (40%), Gaps = 42/327 (12%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
++ G +SA R+F+ MP R VS++ MI G N F+ + F ++ + + V LT
Sbjct: 214 IKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLT 273
Query: 61 GYVRNRRLGDA---RRLFDSMPQKDVVSW-----NAMLSGYAQNGYADEAREVFYQMPHK 112
G + + ++ +K SW NA++ Y++ G AR VF M K
Sbjct: 274 GVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK 333
Query: 113 NAI-SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM 171
I SW ++A +G+ EEA RLF+ E+ ++ G +L A
Sbjct: 334 RCIVSWTSMIAGLAMHGQGEEAVRLFN-----EMTAYGVTPDGISFISLLHACSH----- 383
Query: 172 HVRDVVSWNTMISGYAQDGD--MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF 229
+G ++G+ S+ K ++ P ++ + MV Y ++G L +A F
Sbjct: 384 ------------AGLIEEGEDYFSEMKRVYHIEP--EIEHYGCMVDLYGRSGKLQKAYDF 429
Query: 230 FDQMP-QKNEISYNAMVAGYVQSNKMDMAREL---FEAMPSRNVSSWNTMITGYGQNG-- 283
QMP I + ++ +++A ++ + N + Y G
Sbjct: 430 ICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKW 489
Query: 284 -DIAQARKLFDMMPQRDCVSWAAIISG 309
D+A RK + + +W+ + G
Sbjct: 490 KDVASIRKSMIVQRIKKTTAWSLVEVG 516
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/554 (37%), Positives = 334/554 (60%), Gaps = 9/554 (1%)
Query: 163 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGM 222
+A ++ +M ++ +S N +I+GY + GD+ A+ +FD+ P + + TW AM++G +Q
Sbjct: 12 SAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 71
Query: 223 LDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWNT 274
+E + F +M +E + ++ +G + + +++ + ++ ++
Sbjct: 72 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSS 131
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
+ Y +NG + + MP R+ V+W +I G AQ G E L ++ +K G N
Sbjct: 132 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 191
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
+ TF LS+C+D+A G+QIH + +K G + V ++L+ MY KCG +G+A F
Sbjct: 192 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 251
Query: 395 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLID 453
E++D V W++MI+ Y HG G +A+ +F +M + ++ +E+ + +L ACSH+GL D
Sbjct: 252 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 311
Query: 454 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 513
+G E F M + Y P KHYTC++DLLGRAG L++A+ ++R+MP + W LL A
Sbjct: 312 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 371
Query: 514 SRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVT 573
IH N E+ ++ + + +++P++S YVLL+N++A++ RW D +R MRD V+K
Sbjct: 372 CNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEA 431
Query: 574 GYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKE 633
G SW E + ++H+F +GD + IY++L+EL L+M+ +GY T VLHD++EEEKE
Sbjct: 432 GISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKE 491
Query: 634 HMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRF 693
L HSEKLAVAF ++ +P G PIR+IKNLRVC DCH A K+IS I R I LRD RF
Sbjct: 492 SDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRF 551
Query: 694 HHFNEGICSCGDYW 707
HHF G CSCGDYW
Sbjct: 552 HHFINGKCSCGDYW 565
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 198/435 (45%), Gaps = 41/435 (9%)
Query: 28 ISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWN 87
+S Y + F A ++ +M +++ +S N+++ GYVR L +AR++FD MP + + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 88 AMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNG-------RIEEACRLFDSK 140
AM++G Q + +E +F +M H S + V +G I + + K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREM-HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 141 SDWE--LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 198
E L+ + L +++ L + M VR++V+WNT+I G AQ+G
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG-------- 171
Query: 199 FDQSPHQDVFTWTAM-VSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMA 257
P ++ + M +SG N + TF + ++++ ++ +
Sbjct: 172 ---CPETVLYLYKMMKISGCRPNKI-----TFVTVLSSCSDLA--------IRGQGQQIH 215
Query: 258 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 317
E + S V+ +++I+ Y + G + A K F D V W+++IS Y G +
Sbjct: 216 AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGD 275
Query: 318 EALNMFIEI-KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV-KTGYETGCFVGNA 375
EA+ +F + ++ +N F L C+ + G ++ +V K G++ G
Sbjct: 276 EAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTC 335
Query: 376 LLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 434
++ + + G + +A + + K D+V W T+++ H + A VF+ + + + P
Sbjct: 336 VVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI--LQIDP 393
Query: 435 DEITMVGVLSACSHA 449
++ + VL A HA
Sbjct: 394 ND-SACYVLLANVHA 407
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 158/381 (41%), Gaps = 58/381 (15%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G SA+ V+ M +++ +S N +I+GY+R AR +FD+MP R L +WN M+ G +
Sbjct: 8 GDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLI 67
Query: 64 RNRRLGDARRLFDSM------PQK---------------------------------DVV 84
+ + LF M P + D+V
Sbjct: 68 QFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLV 127
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD----SK 140
+++ Y +NG + V MP +N ++WN L+ NG E L+ S
Sbjct: 128 VNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG 187
Query: 141 SDWELISWNCLMGGFVKRKMLGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAK 196
I++ ++ + G +++ + V +++IS Y++ G + A
Sbjct: 188 CRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAA 247
Query: 197 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-----NEISYNAMVAGYVQS 251
F + +D W++M+S Y +G DEA F+ M ++ NE+++ ++ S
Sbjct: 248 KAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHS 307
Query: 252 NKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAA 305
D ELF+ M + + + ++ G+ G + QA + MP + D V W
Sbjct: 308 GLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKT 367
Query: 306 IISGYAQTGHYEEALNMFIEI 326
++S + E A +F EI
Sbjct: 368 LLSACNIHKNAEMAQRVFKEI 388
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/567 (38%), Positives = 318/567 (56%), Gaps = 45/567 (7%)
Query: 186 YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN-------- 237
YA G ++ A+N+FD+ H+DV TW M+ Y + G++DEA F++M N
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 238 -----------EISYN--------------------AMVAGYVQSNKMDMARELFEAMPS 266
+ YN A+V Y + MDMARE F M
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
Query: 267 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 326
RN+ M++GY + G + A+ +FD ++D V W +IS Y ++ + +EAL +F E+
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
G + + +S CA++ L+ K +H + G E+ + NAL+ MY KCG +
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 387 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
DVFE + ++VVSW++MI + HG AL +F MK V+P+E+T VGVL C
Sbjct: 396 DATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455
Query: 447 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 506
SH+GL++ G + F SM +Y++TP +HY CM+DL GRA L EA +++ +MP
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVI 515
Query: 507 WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRD 566
WG+L+ A RIHG ELG+ AA+ + ++EP + G VL+SN+YA RW D N+R M +
Sbjct: 516 WGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEE 575
Query: 567 VGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 626
V K G S ++ K H+F +GD H + + IYA L+E+ K++ GYV VL D
Sbjct: 576 KNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVD 635
Query: 627 VEEEEKEHMLKYHSEKLAVAFGILTIPAGRP------IRVIKNLRVCEDCHNAIKHISKI 680
VEEEEK+ ++ +HSEKLA+ FG++ IR++KNLRVCEDCH K +SK+
Sbjct: 636 VEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKV 695
Query: 681 VGRLIILRDSHRFHHFNEGICSCGDYW 707
R II+RD RFH + G+CSC DYW
Sbjct: 696 YEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 191/399 (47%), Gaps = 34/399 (8%)
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLL 121
Y R+ AR +FD M +DVV+WN M+ Y + G DEA ++F +M N + +L
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 122 AAYVH------NGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM 171
V N R A F D + D L++ L+ + + AR+ F KM
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT--ALVTMYAGAGCMDMAREFFRKM 273
Query: 172 HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFD 231
VR++ M+SGY++ G + A+ +FDQ+ +D+ WT M+S YV++ EA F+
Sbjct: 274 SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFE 333
Query: 232 QMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNG 283
+M + + +S ++++ +D A+ + + + S N +I Y + G
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 284 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 343
+ R +F+ MP+R+ VSW+++I+ + G +AL++F +K++ N TF L
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 344 TCADIAALELGKQIHGQVVKTGYET------GCFVGNALLGMYFKCGSIGEANDVFEGIE 397
C+ +E GK+I + T GC V ++ + + EA +V E +
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMV-----DLFGRANLLREALEVIESMP 508
Query: 398 -EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 435
+VV W ++++ H G+ L F + + + ++PD
Sbjct: 509 VASNVVIWGSLMSACRIH--GELELGKFAAKRILELEPD 545
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 166/321 (51%), Gaps = 25/321 (7%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
A+++ Y +AR+ F KM R+L M++GY + RL DA+ +FD +KD+V
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLV 310
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEA-----CR 135
W M+S Y ++ Y EA VF +M + +S +++A + G +++A C
Sbjct: 311 CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC- 369
Query: 136 LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
+ + + EL N L+ + K L A R +F+KM R+VVSW++MI+ + G+ S A
Sbjct: 370 IHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDA 429
Query: 196 KNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVA 246
+LF + ++V T+ ++ G +G+++E + F M + I+ Y MV
Sbjct: 430 LSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVD 489
Query: 247 GYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGDIA----QARKLFDMMPQRDCV 301
+ ++N + A E+ E+MP + NV W ++++ +G++ A+++ ++ P D
Sbjct: 490 LFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDG- 548
Query: 302 SWAAIISGYAQTGHYEEALNM 322
+ + + YA+ +E+ N+
Sbjct: 549 ALVLMSNIYAREQRWEDVRNI 569
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 152/314 (48%), Gaps = 22/314 (7%)
Query: 31 YLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAML 90
Y R + AR++FD+M RD+V+WN M+ Y R + +A +LF+ M +V+ +L
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 91 ----SGYAQNGYADEAREVFYQMPHKNAISWN-----GLLAAYVHNGRIEEACRLFDSKS 141
S + G R + Y+ +N + + L+ Y G ++ A F S
Sbjct: 216 CNIVSACGRTGNMRYNRAI-YEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 201
L ++ G+ K L A+ +FD+ +D+V W TMIS Y + +A +F++
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 202 ----SPHQDVFTWTAMVSGYVQNGMLDEAR---TFFDQMPQKNEISY-NAMVAGYVQSNK 253
DV + +++S G+LD+A+ + ++E+S NA++ Y +
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 254 MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISG 309
+D R++FE MP RNV SW++MI +G+ + A LF M Q + V++ ++ G
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 310 YAQTGHYEEALNMF 323
+ +G EE +F
Sbjct: 455 CSHSGLVEEGKKIF 468
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 2/229 (0%)
Query: 288 ARKLFDMMPQR-DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
A +F +P + + + + +++ + + I+ G L++ +F L +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 406
++AL G ++HG K FV + MY CG I A +VF+ + +DVV+WNT
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 407 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 466
MI Y R G +A +FE MK V PDE+ + ++SAC G + R Y +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM-RYNRAIYEFLIEN 241
Query: 467 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASR 515
V + T ++ + AG ++ A++ R M S + G S+
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSK 290
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/740 (31%), Positives = 395/740 (53%), Gaps = 41/740 (5%)
Query: 4 GHCDS---ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
G C S A ++F+ MP+R +++N ++ LR+ + A +LF +M +++ +
Sbjct: 34 GRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMV 93
Query: 61 ----------GYVRNRRL-GDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM 109
G+ R++ G RL + +V N+++ Y++NG + +R+VF M
Sbjct: 94 KLLQVCSNKEGFAEGRQIHGYVLRLG---LESNVSMCNSLIVMYSRNGKLELSRKVFNSM 150
Query: 110 PHKNAISWNGLLAAYVHNGRIEEACRLFDS------KSDWELISWNCLMGGFVKRKMLGA 163
+N SWN +L++Y G +++A L D K D +++WN L+ G+ + +
Sbjct: 151 KDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD--IVTWNSLLSGYASKGLSKD 208
Query: 164 ARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNL----FDQSPHQDVFTWTAMVS 215
A + +M + + S ++++ A+ G + K + DV+ T ++
Sbjct: 209 AIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLID 268
Query: 216 GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----S 271
Y++ G L AR FD M KN +++N++V+G + + A L M + +
Sbjct: 269 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 328
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIK 327
WN++ +GY G +A + M ++ + VSW AI SG ++ G++ AL +FI+++
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 387
+G N +T S L ++ L GK++HG ++ +V AL+ MY K G +
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 448
Query: 388 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
A ++F GI+ K + SWN M+ GYA G G++ + F M G++PD IT VLS C
Sbjct: 449 SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 507
++GL+ G +YF M Y + P+ +H +CM+DLLGR+G L+EA D ++ M +P A W
Sbjct: 509 NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIW 568
Query: 508 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 567
GA L + +IH + EL E A + + +EPHNS Y+++ NLY+ RW D +R+ MR+
Sbjct: 569 GAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNN 628
Query: 568 GVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDV 627
V+ +SW+++ +H F HP++ IY L +L +M++ GYV T + D+
Sbjct: 629 RVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDI 688
Query: 628 EEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIIL 687
+ EKE +L H+EKLA+ +G++ PIRV+KN +C D H K++S + R I+L
Sbjct: 689 SDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVL 748
Query: 688 RDSHRFHHFNEGICSCGDYW 707
++ R HHF +G CSC D W
Sbjct: 749 QEGARVHHFRDGKCSCNDSW 768
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 203/407 (49%), Gaps = 22/407 (5%)
Query: 120 LLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 179
L +H G I+ R D+ SD ++S + MG + + LG A KLFD+M RD ++W
Sbjct: 4 FLGLTIHGGLIK---RGLDN-SDTRVVSAS--MGFYGRCVSLGFANKLFDEMPKRDDLAW 57
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ-----NGMLD--EARTFFDQ 232
N ++ + G+ +A LF + + + + +Q G + + + +
Sbjct: 58 NEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR 117
Query: 233 MPQKNEISY-NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKL 291
+ ++ +S N+++ Y ++ K++++R++F +M RN+SSWN++++ Y + G + A L
Sbjct: 118 LGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGL 177
Query: 292 FDMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 347
D M + D V+W +++SGYA G ++A+ + ++ G + S+ S L A+
Sbjct: 178 LDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE 237
Query: 348 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 407
L+LGK IHG +++ +V L+ MY K G + A VF+ ++ K++V+WN++
Sbjct: 238 PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 297
Query: 408 IAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 467
++G + K A + M+ G+KPD IT + S + G ++ + M K+
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKG 356
Query: 468 VTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE---PPAASWGALL 511
V P+ +T + + G A + M E P AA+ LL
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/530 (22%), Positives = 229/530 (43%), Gaps = 72/530 (13%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNV 57
RNG + + +VFN+M R+ S+N+++S Y + A L D+M + D+V+WN
Sbjct: 136 RNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNS 195
Query: 58 MLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN 113
+L+GY DA + M + S +++L A+ G+ + + + +N
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI-HGYILRN 254
Query: 114 AISWN-----GLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLF 168
+ ++ L+ Y+ G + A +FD +++WN L+ G +L A L
Sbjct: 255 QLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALM 314
Query: 169 DKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQN 220
+M D ++WN++ SGYA G +A ++ + + +V +WTA+ SG +N
Sbjct: 315 IRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKN 374
Query: 221 GMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS----W 272
G A F +M ++ N + + ++ + + +E+ +N+
Sbjct: 375 GNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA 434
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
++ YG++GD+ A ++F + + SW ++ GYA G EE + F + G
Sbjct: 435 TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGME 494
Query: 333 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 392
+ TF+ LS C + ++ G + + ++++ Y +
Sbjct: 495 PDAITFTSVLSVCKNSGLVQEGWK-YFDLMRSRY------------------------GI 529
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI 452
IE + M+ R G+ +A ++ ++T+ +KPD LS+C I
Sbjct: 530 IPTIEH-----CSCMVDLLGRSGYLDEA---WDFIQTMSLKPDATIWGAFLSSCK----I 577
Query: 453 DRGTEYFYSMNKDYSVTP--SSKHYTCMIDL---LGRAGRLEEAQDLMRN 497
R E K V +S +Y MI+L L R +E ++LMRN
Sbjct: 578 HRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRN 627
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 158/350 (45%), Gaps = 33/350 (9%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWN 56
++ G+ A VF+ M ++ V++N+++SG A L +M + D ++WN
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 57 VMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK 112
+ +GY + A + M +K +VVSW A+ SG ++NG A +VF +M +
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 113 ----NAISWNGLLA-----AYVHNGR-IEEACRLFDSKSDWELISWNCLMGGFVKRKMLG 162
NA + + LL + +H+G+ + C + D + + L+ + K L
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT--ALVDMYGKSGDLQ 448
Query: 163 AARKLFDKMHVRDVVSWNTMISGYAQDG----DMSQAKNLFDQSPHQDVFTWTAMVSGYV 218
+A ++F + + + SWN M+ GYA G ++ + + D T+T+++S
Sbjct: 449 SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508
Query: 219 QNGMLDEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPSR-NVSSW 272
+G++ E +FD M + I + MV +S +D A + + M + + + W
Sbjct: 509 NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIW 568
Query: 273 NTMITGYGQNGDIAQAR---KLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
++ + D+ A K ++ + ++ +I+ Y+ +E+
Sbjct: 569 GAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDV 618
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 353 LGKQIHGQVVKTGYE-TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
LG IHG ++K G + + V +A +G Y +C S+G AN +F+ + ++D ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE---YFYSMNKDYSV 468
R G ++A+ +F M+ G K + TMV +L CS+ G + Y + + +V
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE--LGEKA 526
+ + +I + R G+LE ++ + +M + +SW ++L + G + +G
Sbjct: 125 SMCNS----LIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 527 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVT 573
+ ++P LLS YA+ G DA + RM+ G++ T
Sbjct: 180 EMEICGLKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGLKPST 225
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/556 (37%), Positives = 332/556 (59%), Gaps = 12/556 (2%)
Query: 164 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQ 219
AR++ + + R+ W +I GYA +G +A ++ +++ FT++A++
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 220 NGMLDEARTFFDQMPQKNEISY----NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTM 275
L+ R F Q + + N M+ YV+ +D AR++F+ MP R+V SW +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 276 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 335
I Y + G++ A +LF+ +P +D V+W A+++G+AQ +EAL F +++ G +
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 336 STFSCALSTCADIAALELGKQIHGQVVKTGYETG--CFVGNALLGMYFKCGSIGEANDVF 393
T + +S CA + A + + K+GY +G+AL+ MY KCG++ EA +VF
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT-IGVKPDEITMVGVLSACSHAGLI 452
+ K+V ++++MI G A HG ++AL +F M T +KP+ +T VG L ACSH+GL+
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 453 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
D+G + F SM + + V P+ HYTCM+DLLGR GRL+EA +L++ M EP WGALLG
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLG 461
Query: 513 ASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 572
A RIH N E+ E AAE +F++EP G Y+LLSN+YA++G W +R +++ G++K
Sbjct: 462 ACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKT 521
Query: 573 TGYSWVEVQN-KIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEE 631
SWV +N ++HKF G+ HP ++I LEEL ++ GY V +DV +
Sbjct: 522 PAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNA 581
Query: 632 KEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSH 691
K +L H+EKLA+AF +LT I ++KNLR+C DCH ++ S++ G++II+RD+
Sbjct: 582 KRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNM 641
Query: 692 RFHHFNEGICSCGDYW 707
RFHHF G CSCGD+W
Sbjct: 642 RFHHFRSGDCSCGDFW 657
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 161/314 (51%), Gaps = 21/314 (6%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAAY-- 124
ARR+ + + ++ W A++ GYA G DEA ++ M + + +++ LL A
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 125 ---VHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 181
++ GR A + F + + N ++ +VK + + ARK+FD+M RDV+SW
Sbjct: 162 MKDLNLGRQFHA-QTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTE 220
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY 241
+I+ YA+ G+M A LF+ P +D+ WTAMV+G+ QN EA +FD+M + +
Sbjct: 221 LIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 242 NAMVAGYVQ-------SNKMDMARELFEA---MPSRNVSSWNTMITGYGQNGDIAQARKL 291
VAGY+ S D A ++ + PS +V + +I Y + G++ +A +
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 292 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAA 350
F M ++ +++++I G A G +EAL++F + E N TF AL C+
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 351 LELGKQIHGQVVKT 364
++ G+Q+ + +T
Sbjct: 401 VDQGRQVFDSMYQT 414
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 138/283 (48%), Gaps = 35/283 (12%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
N MI Y++ AR +FD+MP+RD++SW ++ Y R + A LF+S+P KD+V
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 144
+W AM++G+AQN EA E F +M K+ I + + A G I +L SK
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRM-EKSGIRADEVTVA----GYISACAQLGASK---- 298
Query: 145 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 204
+ R + A + + VV + +I Y++ G++ +A N+F +
Sbjct: 299 ----------YADRAVQIAQKSGYSPSD--HVVIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 205 QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAM-----VAGYVQSNKMDMARE 259
++VFT+++M+ G +G EA F M + EI N + + S +D R+
Sbjct: 347 KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQ 406
Query: 260 LFEAM-------PSRNVSSWNTMITGYGQNGDIAQARKLFDMM 295
+F++M P+R+ + M+ G+ G + +A +L M
Sbjct: 407 VFDSMYQTFGVQPTRD--HYTCMVDLLGRTGRLQEALELIKTM 447
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 142/345 (41%), Gaps = 63/345 (18%)
Query: 40 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV--VSW----------- 86
AR + + + R+ W ++ GY + +A ++ M ++++ VS+
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 87 --------------------------NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGL 120
N M+ Y + D AR+VF +MP ++ ISW L
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 121 LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN 180
+AAY G +E A LF+S ++++W ++ GF + A + FD+M + +
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 181 TMISGYAQDGDMSQAKNLFDQ----------SPHQDVFTWTAMVSGYVQNGMLDEARTFF 230
++GY A D+ SP V +A++ Y + G ++EA F
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 231 DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTM-----ITGYGQNGDI 285
M KN +Y++M+ G + A LF M ++ NT+ + +G +
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 286 AQARKLFDMM-------PQRDCVSWAAIISGYAQTGHYEEALNMF 323
Q R++FD M P RD + ++ +TG +EAL +
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRD--HYTCMVDLLGRTGRLQEALELI 444
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 153/352 (43%), Gaps = 63/352 (17%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNR 66
D A +VF+ MP R +S+ +I+ Y R A +LF+ +P +D+V+W M+TG+ +N
Sbjct: 201 DCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNA 260
Query: 67 RLGDARRLFDSMPQKDVVSWNAMLSGY----AQNG---YADEAREVFYQ---MPHKNAIS 116
+ +A FD M + + + ++GY AQ G YAD A ++ + P + +
Sbjct: 261 KPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVI 320
Query: 117 WNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV 176
+ L+ Y G +EEA +F S M+ ++V
Sbjct: 321 GSALIDMYSKCGNVEEAVNVFMS-------------------------------MNNKNV 349
Query: 177 VSWNTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEARTFFD 231
++++MI G A G +A +LF Q + T+ + +G++D+ R FD
Sbjct: 350 FTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFD 409
Query: 232 QMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAM---PSRNVSSWNTMITG--YGQ 281
M Q + Y MV ++ ++ A EL + M P V W ++
Sbjct: 410 SMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGV--WGALLGACRIHN 467
Query: 282 NGDIAQ--ARKLFDMMPQRDCVSWAAIISG-YAQTGHYEEALNMFIEIKRDG 330
N +IA+ A LF++ P D + ++S YA G + L + IK G
Sbjct: 468 NPEIAEIAAEHLFELEP--DIIGNYILLSNVYASAGDWGGVLRVRKLIKEKG 517
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
R G+ + A +F ++P + V++ AM++G+ +NA+ A + FD+M + + + V + G
Sbjct: 227 RVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 62 YVRNRRLGDARRLFDSM----------PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
Y+ A + D P VV +A++ Y++ G +EA VF M +
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCL--MGGFVK---RKMLGAARK 166
KN +++ ++ +GR +EA LF I N + +G + ++ R+
Sbjct: 347 KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQ 406
Query: 167 LFDKMH-------VRDVVSWNTMISGYAQDGDMSQAKNLFDQ---SPHQDVFTWTAMV 214
+FD M+ RD + M+ + G + +A L PH V W A++
Sbjct: 407 VFDSMYQTFGVQPTRD--HYTCMVDLLGRTGRLQEALELIKTMSVEPHGGV--WGALL 460
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 19/261 (7%)
Query: 323 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 382
F EI E L S S L C ++ + KQIHG V++ G + C++ L+ K
Sbjct: 38 FSEISNQKELLVSSLIS-KLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTK 93
Query: 383 CGSIGE--ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 440
G + A V E ++ ++ W +I GYA G +A+ ++ M+ + P T
Sbjct: 94 LGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFS 153
Query: 441 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYT--CMIDLLGRAGRLEEAQDLMRNM 498
+L AC ++ G ++ + + + Y MID+ + ++ A+ + M
Sbjct: 154 ALLKACGTMKDLNLGRQFH---AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEM 210
Query: 499 PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAG 558
P E SW L+ A GN E AAE+ + + + + +A + + +A
Sbjct: 211 P-ERDVISWTELIAAYARVGNMEC---AAELFESLPTKDMVAWTAMVTGFAQNAKPQEAL 266
Query: 559 NMRSRMRDVGVQ----KVTGY 575
RM G++ V GY
Sbjct: 267 EYFDRMEKSGIRADEVTVAGY 287
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/745 (31%), Positives = 380/745 (51%), Gaps = 123/745 (16%)
Query: 19 RSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
R+ + N ++ ++ R AR +FDKMP+RD +WN M+ Y +RRL DA +LF S
Sbjct: 26 RTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSN 85
Query: 79 PQKDVVSWNAMLSGYAQNGYADEAREVFYQMP---------------------------- 110
P K+ +SWNA++SGY ++G EA +F++M
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 111 --HKNAISW---------NGLLAAYVHNGRIEEACRLFDS-KSDWELISWNCLMGGFVKR 158
H + I NGLLA Y RI EA LF++ + + ++W ++ G+ +
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 159 KMLGAARKLFDKMHVR---------------------------------------DVVSW 179
A + F + ++
Sbjct: 206 GFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ 265
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN-- 237
+ +I YA+ +M A+ L + DV +W +M+ G V+ G++ EA + F +M +++
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 238 --EISYNAMVAGYVQS-NKMDMARELFEAMPSRNVSSW----NTMITGYGQNGDIAQARK 290
+ + +++ + S +M +A + +++ N ++ Y + G + A K
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALK 385
Query: 291 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 350
+F+ M ++D +SW A+++G G Y+EAL +F ++ G + ++ + LS A++
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 351 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 410
LE G+Q+HG +K+G+ + V N+L+ MY KCGS+ +AN +F +E +D+++W +I G
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVG 505
Query: 411 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 470
YA++G L++ YF SM Y +TP
Sbjct: 506 YAKNG-----------------------------------LLEDAQRYFDSMRTVYGITP 530
Query: 471 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 530
+HY CMIDL GR+G + + L+ M EP A W A+L ASR HGN E GE+AA+ +
Sbjct: 531 GPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTL 590
Query: 531 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 590
++EP+N+ YV LSN+Y+A+GR +A N+R M+ + K G SWVE + K+H F
Sbjct: 591 MELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSE 650
Query: 591 DCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 650
D HP IY+ ++E+ L ++ GY + LHD+++E KE L YHSEKLAVAFG+L
Sbjct: 651 DRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLL 710
Query: 651 TIPAGRPIRVIKNLRVCEDCHNAIK 675
+P+G PIR+IKNLRVC DCH+A+K
Sbjct: 711 VVPSGAPIRIIKNLRVCGDCHSAMK 735
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 202/397 (50%), Gaps = 21/397 (5%)
Query: 139 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 198
S +D + N L+G K + AR++FDKM RD +WNTMI Y+ +S A+ L
Sbjct: 22 SYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKL 81
Query: 199 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMAR 258
F +P ++ +W A++SGY ++G EA F +M Q + I N G V +
Sbjct: 82 FRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEM-QSDGIKPNEYTLGSVLRMCTSLVL 140
Query: 259 EL---------FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIIS 308
L + +V+ N ++ Y Q I++A LF+ M +++ V+W ++++
Sbjct: 141 LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200
Query: 309 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET 368
GY+Q G +A+ F +++R+G N+ TF L+ CA ++A +G Q+H +VK+G++T
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 369 GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK 428
+V +AL+ MY KC + A + EG+E DVVSWN+MI G R G +AL +F M
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 429 TIGVKPDEITMVGVLS--ACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAG 486
+K D+ T+ +L+ A S + + + + Y+ + ++D+ + G
Sbjct: 321 ERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN--ALVDMYAKRG 378
Query: 487 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 523
++ A + M E SW AL + GNT G
Sbjct: 379 IMDSALKVFEGM-IEKDVISWTAL-----VTGNTHNG 409
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 23/256 (8%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF----------DKMPQRD 51
+ G DSAL+VF M + +S+ A+++G N + A LF DK+
Sbjct: 376 KRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTAS 435
Query: 52 LVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
++S + LT +++ + P V+ N++++ Y + G ++A +F M
Sbjct: 436 VLSASAELTLLEFGQQV-HGNYIKSGFPSSLSVN-NSLVTMYTKCGSLEDANVIFNSMEI 493
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS-----WNCLMGGFVKRKMLGAARK 166
++ I+W L+ Y NG +E+A R FDS I+ + C++ F + +
Sbjct: 494 RDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQ 553
Query: 167 LFDKMHVR-DVVSWNTMISGYAQDGDMSQ----AKNLFDQSPHQDVFTWTAMVSGYVQNG 221
L +M V D W +++ + G++ AK L + P+ V + + + Y G
Sbjct: 554 LLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAV-PYVQLSNMYSAAG 612
Query: 222 MLDEARTFFDQMPQKN 237
DEA M +N
Sbjct: 613 RQDEAANVRRLMKSRN 628
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/479 (41%), Positives = 300/479 (62%), Gaps = 7/479 (1%)
Query: 236 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 295
K+ +++ Y + A+ +F+ S+++ +WN+++ Y + G I ARKLFD M
Sbjct: 95 KDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEM 154
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMF--IEIKRDGESL---NRSTFSCALSTCADIAA 350
P+R+ +SW+ +I+GY G Y+EAL++F +++ + E+ N T S LS C + A
Sbjct: 155 PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGA 214
Query: 351 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI-EEKDVVSWNTMIA 409
LE GK +H + K E +G AL+ MY KCGS+ A VF + +KDV +++ MI
Sbjct: 215 LEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMIC 274
Query: 410 GYARHGFGKQALMVFESMKTI-GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 468
A +G + +F M T + P+ +T VG+L AC H GLI+ G YF M +++ +
Sbjct: 275 CLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGI 334
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 528
TPS +HY CM+DL GR+G ++EA+ + +MP EP WG+LL SR+ G+ + E A +
Sbjct: 335 TPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALK 394
Query: 529 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFT 588
+ +++P NSG YVLLSN+YA +GRW + +R M G+ KV G S+VEV+ +H+F
Sbjct: 395 RLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFV 454
Query: 589 VGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFG 648
VGD E +RIYA L+E+ ++R GYV+ TK VL D+ E++KE L YHSEKLA+AF
Sbjct: 455 VGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFC 514
Query: 649 ILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
++ G P+R+IKNLR+C DCH +K ISK+ R I++RD +RFHHF +G CSC D+W
Sbjct: 515 LMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 40/303 (13%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW 117
+L Y L A+R+FD KD+ +WN++++ YA+ G D+AR++F +MP +N ISW
Sbjct: 103 LLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISW 162
Query: 118 NGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKL------ 167
+ L+ YV G+ +EA LF K + + N F +L A +L
Sbjct: 163 SCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPN----EFTMSTVLSACGRLGALEQG 218
Query: 168 ------FDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLFDQ-SPHQDVFTWTAMVSGYVQ 219
DK HV D+V +I YA+ G + +AK +F+ +DV ++AM+
Sbjct: 219 KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAM 278
Query: 220 NGMLDEARTFFDQMPQKNEISYNAMV----------AGYVQSNK--MDMARELFEAMPSR 267
G+ DE F +M + I+ N++ G + K M E F PS
Sbjct: 279 YGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPS- 337
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIISGYAQTGHY---EEALNMF 323
+ + M+ YG++G I +A MP + D + W +++SG G E AL
Sbjct: 338 -IQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRL 396
Query: 324 IEI 326
IE+
Sbjct: 397 IEL 399
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 151/353 (42%), Gaps = 59/353 (16%)
Query: 117 WNGLLAAYVHN-------GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 169
WN ++ A VHN I R+ + + + ++ L+ F L ++
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 170 KMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 225
++ + +D ++++ Y+ GD+ A+ +FD S +D+ W ++V+ Y + G++D+
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 226 ARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM--PSRNVS------------- 270
AR FD+MP++N IS++ ++ GYV K A +LF M P N +
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 271 ------------SW-----------------NTMITGYGQNGDIAQARKLFDMM-PQRDC 300
W +I Y + G + +A+++F+ + ++D
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEI-KRDGESLNRSTFSCALSTCADIAALELGKQIHG 359
+++A+I A G +E +F E+ D + N TF L C + GK
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 360 QVVKT-GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAG 410
+++ G ++ +Y + G I EA + E DV+ W ++++G
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 152/341 (44%), Gaps = 53/341 (15%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G SA RVF+ + ++N++++ Y + AR LFD+MP+R+++SW+ ++ GYV
Sbjct: 111 GDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYV 170
Query: 64 RNRRLGDARRLFDSM----PQKDVVSWN-----AMLSGYAQNGYADEAREVFYQMPHKNA 114
+ +A LF M P + V N +LS + G ++ +
Sbjct: 171 MCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGK----------- 219
Query: 115 ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM-HV 173
W + AY+ +E +++ L+ + K L A+++F+ +
Sbjct: 220 --W---VHAYIDKYHVE-----------IDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 174 RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD-----VFTWTAMVSGYVQNGMLDEART 228
+DV +++ MI A G + LF + D T+ ++ V G+++E ++
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 229 FFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQN 282
+F M ++ I+ Y MV Y +S + A +MP +V W ++++G
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 283 GDIAQA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
GDI ++L ++ P + ++ + + YA+TG + E
Sbjct: 384 GDIKTCEGALKRLIELDPM-NSGAYVLLSNVYAKTGRWMEV 423
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 40/258 (15%)
Query: 303 WAAIISGYAQ---TGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHG 359
W II + +++++ ++ S + TF L + + L LG++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 360 QVVKTGYETGCFVGNALLGMYFKCGS-------------------------------IGE 388
Q++ G + FV +LL MY CG I +
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 389 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-----VKPDEITMVGVL 443
A +F+ + E++V+SW+ +I GY G K+AL +F M+ V+P+E TM VL
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 444 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 503
SAC G +++G ++ ++ Y V T +ID+ + G LE A+ + + +
Sbjct: 207 SACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 504 AASWGALLGASRIHGNTE 521
++ A++ ++G T+
Sbjct: 266 VKAYSAMICCLAMYGLTD 283
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 249/727 (34%), Positives = 391/727 (53%), Gaps = 67/727 (9%)
Query: 36 RFSLARDLFDK-MPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 94
+F RDL K + +RDL + + YV+ S+ N ++ Y+
Sbjct: 7 KFKTFRDLLLKSVAERDLFTGKSLHALYVK------------SIVASSTYLSNHFVNLYS 54
Query: 95 QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG 154
+ G AR FY N S+N ++ AY + +I A +LFD + +S+N L+ G
Sbjct: 55 KCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISG 114
Query: 155 FVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW 210
+ + AA LF +M D + + +I+ D+ + + F S D ++
Sbjct: 115 YADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSS 174
Query: 211 T--AMVSGYVQNGMLDEARTFFDQMPQ-KNEISYNAMVAGYVQSNKMDMARELFEAMPSR 267
A V+ Y + G+L EA + F M + ++E+S+N+M+ Y Q + A L++ M +
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 268 N--------------VSSWNTMI-----------TGYGQNGDIAQ--------------- 287
++S + +I G+ QN +
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGM 294
Query: 288 --ARKLFDMMPQRDCVSWAAIISGYAQTGHY-EEALNMFIEIKRDGESLNRSTFSCALST 344
+ K+F + D V W +ISGY+ EEA+ F +++R G + +F C S
Sbjct: 295 YDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSA 354
Query: 345 CADIAALELGKQIHGQVVKTGYETGCF-VGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 403
C+++++ KQIHG +K+ + V NAL+ +Y+K G++ +A VF+ + E + VS
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414
Query: 404 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMN 463
+N MI GYA+HG G +AL++++ M G+ P++IT V VLSAC+H G +D G EYF +M
Sbjct: 415 FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 464 KDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 523
+ + + P ++HY+CMIDLLGRAG+LEEA+ + MP++P + +W ALLGA R H N L
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534
Query: 524 EKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNK 583
E+AA + M+P + YV+L+N+YA + +W + ++R MR ++K G SW+EV+ K
Sbjct: 535 ERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKK 594
Query: 584 IHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTK--LVLHDVEEEEKEHM-LKYHS 640
H F D HP + +LEE+ KM++ GYV K +V D E E M L +HS
Sbjct: 595 KHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHS 654
Query: 641 EKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGI 700
EKLAVAFG+++ G + V+KNLR+C DCHNAIK +S + GR II+RD+ RFH F +G
Sbjct: 655 EKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGK 714
Query: 701 CSCGDYW 707
CSCGDYW
Sbjct: 715 CSCGDYW 721
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 173/468 (36%), Gaps = 162/468 (34%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
+ G A F + + SYN ++ Y ++++ +AR LFD++PQ D VS+N +++G
Sbjct: 55 KCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISG 114
Query: 62 YVRNRRLGDARRLFDSM--------------------PQKDVVSW--------------- 86
Y R A LF M + D++
Sbjct: 115 YADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSS 174
Query: 87 --NAMLSGYAQNGYADEAREVFYQMPH-KNAISWNGLLAAYVHNGRIEEACRLFDS---- 139
NA ++ Y++ G EA VFY M ++ +SWN ++ AY + +A L+
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 140 --KSDW--------ELISWNCLMG-----------GFVKRKMLGA--------------- 163
K D L S + L+G GF + +G+
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGM 294
Query: 164 --ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQ--------------------------- 194
+ K+F ++ D+V WNTMISGY+ + ++S+
Sbjct: 295 YDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSA 354
Query: 195 AKNLFDQS--------------PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS 240
NL S P + A++S Y ++G L +AR FD+MP+ N +S
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414
Query: 241 YNAMVAGYVQ-----------------------------------SNKMDMARELFEAMP 265
+N M+ GY Q K+D +E F M
Sbjct: 415 FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 266 SR-----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRD-CVSWAAII 307
++ MI G+ G + +A + D MP + V+WAA++
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/528 (39%), Positives = 312/528 (59%), Gaps = 10/528 (1%)
Query: 190 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMV 245
GDM A+ +FD+ +F W + GYV+N + E+ + +M + +E +Y +V
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 246 AGYVQSNKMDMARELFEAMPSRNVSSWNTMITG----YGQNGDIAQARKLFDMMPQRDCV 301
Q L + + T Y + G+++ A LF+ M +D V
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 302 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 361
+W A ++ QTG+ AL F ++ D + T LS C + +LE+G++I+ +
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 362 VKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 421
K + V NA L M+ KCG+ A +FE +++++VVSW+TMI GYA +G ++AL
Sbjct: 237 RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 422 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSM--NKDYSVTPSSKHYTCMI 479
+F +M+ G++P+ +T +GVLSACSHAGL++ G YF M + D ++ P +HY CM+
Sbjct: 297 TLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMV 356
Query: 480 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 539
DLLGR+G LEEA + ++ MP EP WGALLGA +H + LG+K A+++ + P
Sbjct: 357 DLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGS 416
Query: 540 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDR 599
+VLLSN+YAA+G+W +RS+MR +G +KV YS VE + KIH F GD HP+
Sbjct: 417 YHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKA 476
Query: 600 IYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIR 659
IY L+E+ K+R+ GYV T V HDVE EEKE L +HSEKLA+AFG++ G PIR
Sbjct: 477 IYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIR 536
Query: 660 VIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
V+KNLR C+DCH K +S + II+RD +RFHHF G+CSC ++W
Sbjct: 537 VMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 25/280 (8%)
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG-- 119
Y++ L A LF+SM KD+V+WNA L+ Q G + A E F +M +A+ ++
Sbjct: 154 YMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC-ADAVQFDSFT 212
Query: 120 ---LLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH 172
+L+A G +E ++D + D +I N + +K AAR LF++M
Sbjct: 213 VVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK 272
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEART 228
R+VVSW+TMI GYA +GD +A LF ++ + T+ ++S G+++E +
Sbjct: 273 QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKR 332
Query: 229 FFDQMPQKNEIS-------YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYG 280
+F M Q N+ + Y MV +S ++ A E + MP + W ++
Sbjct: 333 YFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
Query: 281 QNGDIAQARKLFDMMPQR--DCVSWAAIISG-YAQTGHYE 317
+ D+ +K+ D++ + D S+ ++S YA G ++
Sbjct: 393 VHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWD 432
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 170/380 (44%), Gaps = 38/380 (10%)
Query: 25 NAMISGYLRN----ARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM-- 78
N++++ L N AR +FD+M + + WN + GYVRN+ ++ L+ M
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRD 102
Query: 79 --PQKDVVSWNAMLSGYAQ-----NGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIE 131
+ D ++ ++ +Q G+A A V Y ++ L+ Y+ G +
Sbjct: 103 LGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA-TELVMMYMKFGELS 161
Query: 132 EACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN-----TMISGY 186
A LF+S +L++WN + V+ A + F+KM D V ++ +M+S
Sbjct: 162 SAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM-CADAVQFDSFTVVSMLSAC 220
Query: 187 AQDGDMSQAKNLFDQSPHQD----VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYN 242
Q G + + ++D++ ++ + A + +++ G + AR F++M Q+N +S++
Sbjct: 221 GQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWS 280
Query: 243 AMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR 298
M+ GY + A LF M + N ++ +++ G + + ++ F +M Q
Sbjct: 281 TMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Query: 299 DCVS-------WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
+ + +A ++ ++G EEA IK+ + + L CA +
Sbjct: 341 NDKNLEPRKEHYACMVDLLGRSGLLEEAYEF---IKKMPVEPDTGIWGALLGACAVHRDM 397
Query: 352 ELGKQIHGQVVKTGYETGCF 371
LG+++ +V+T + G +
Sbjct: 398 ILGQKVADVLVETAPDIGSY 417
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 149/362 (41%), Gaps = 75/362 (20%)
Query: 118 NGLLAAYVHN----GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH- 172
N LL + N G + A ++FD + WN L G+V+ ++ + L+ KM
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRD 102
Query: 173 --VR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW---------TAMVSGYVQN 220
VR D ++ ++ +Q GD S L H V + T +V Y++
Sbjct: 103 LGVRPDEFTYPFVVKAISQLGDFSCGFAL-----HAHVVKYGFGCLGIVATELVMMYMKF 157
Query: 221 GMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMI 276
G L A F+ M K+ +++NA +A VQ+ +A E F M + V + +M+
Sbjct: 158 GELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSML 217
Query: 277 TGYGQNGDIA-------QARK----------------------------LFDMMPQRDCV 301
+ GQ G + +ARK LF+ M QR+ V
Sbjct: 218 SACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVV 277
Query: 302 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 361
SW+ +I GYA G EAL +F ++ +G N TF LS C+ + GK+ +
Sbjct: 278 SWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLM 337
Query: 362 VKTGYET--------GCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYA 412
V++ + C V LLG + G + EA + + + E D W ++ A
Sbjct: 338 VQSNDKNLEPRKEHYACMVD--LLG---RSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
Query: 413 RH 414
H
Sbjct: 393 VH 394
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 124/272 (45%), Gaps = 30/272 (11%)
Query: 1 MRNGHCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL---- 52
++ G+ AL FN M + S + +M+S + + +++D+ + ++
Sbjct: 186 VQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNI 245
Query: 53 VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK 112
+ N L +++ AR LF+ M Q++VVSW+ M+ GYA NG + EA +F M ++
Sbjct: 246 IVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNE 305
Query: 113 ----NAISWNGLLAAYVHNGRIEEACRLF-------DSKSDWELISWNCLMGGFVKRKML 161
N +++ G+L+A H G + E R F D + + C++ + +L
Sbjct: 306 GLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLL 365
Query: 162 GAARKLFDKMHVR-DVVSWNTMISGYAQDGDM----SQAKNLFDQSPHQDVFTWTAMVSG 216
A + KM V D W ++ A DM A L + +P D+ ++ ++S
Sbjct: 366 EEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAP--DIGSYHVLLSN 423
Query: 217 -YVQNG---MLDEARTFFDQMPQKNEISYNAM 244
Y G +D+ R+ ++ K +Y+++
Sbjct: 424 IYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 414
K+IH V++TG+ + LL G + A VF+ + + + WNT+ GY R+
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 415 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH 474
++L++++ M+ +GV+PDE T V+ A S G G + K Y
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVK-YGFGCLGIV 146
Query: 475 YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 523
T ++ + + G L A+ L +M + A W A L GN+ +
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVA-WNAFLAVCVQTGNSAIA 194
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/643 (34%), Positives = 344/643 (53%), Gaps = 39/643 (6%)
Query: 72 RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIE 131
R + S +VS +++L D + +F +N N L+ N R E
Sbjct: 55 RGVLSSRVAAQLVSCSSLLKS------PDYSLSIFRNSEERNPFVLNALIRGLTENARFE 108
Query: 132 EACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 191
+ R F+ LG D++ V+ N+ + G+ G
Sbjct: 109 SSVR------------------HFILMLRLGVKP---DRLTFPFVLKSNSKL-GFRWLGR 146
Query: 192 MSQA---KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAM 244
A KN D D F ++V Y + G L A F++ P +++ + +N +
Sbjct: 147 ALHAATLKNFVDC----DSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 245 VAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWA 304
+ GY ++ M MA LF +MP RN SW+T+I GY +G++ +A++LF++MP+++ VSW
Sbjct: 203 INGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWT 262
Query: 305 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 364
+I+G++QTG YE A++ + E+ G N T + LS C+ AL G +IHG ++
Sbjct: 263 TLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN 322
Query: 365 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVF 424
G + +G AL+ MY KCG + A VF + KD++SW MI G+A HG QA+ F
Sbjct: 323 GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCF 382
Query: 425 ESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGR 484
M G KPDE+ + VL+AC ++ +D G +F SM DY++ P+ KHY ++DLLGR
Sbjct: 383 RQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGR 442
Query: 485 AGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLL 544
AG+L EA +L+ NMP P +W AL A + H E ++ + +++P G Y+ L
Sbjct: 443 AGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFL 502
Query: 545 SNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFL 604
+A+ G D R ++ ++ G+S++E+ +++KF+ GD H I L
Sbjct: 503 DKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKL 562
Query: 605 EELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNL 664
+E+ ++GY +HD+EEEEKE++ HSEKLA+ G L G IR+IKNL
Sbjct: 563 DEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNL 622
Query: 665 RVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
R+C DCH+ +K++SKI R I+LRD+ +FHHF +G CSCGDYW
Sbjct: 623 RICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 166/348 (47%), Gaps = 35/348 (10%)
Query: 2 RNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNV 57
+ G A +VF P R S + +N +I+GY R +A LF MP+R+ SW+
Sbjct: 173 KTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWST 232
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----N 113
++ GYV + L A++LF+ MP+K+VVSW +++G++Q G + A +++M K N
Sbjct: 233 LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPN 292
Query: 114 AISWNGLLAAYVHNGRIEEACR----LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 169
+ +L+A +G + R + D+ + L+ + K L A +F
Sbjct: 293 EYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS 352
Query: 170 KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------SPHQDVFTWTAMVSGYVQNGML 223
M+ +D++SW MI G+A G QA F Q P + VF A+++ + + +
Sbjct: 353 NMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVF--LAVLTACLNSSEV 410
Query: 224 DEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMI- 276
D FFD M I Y +V ++ K++ A EL E MP + ++++W +
Sbjct: 411 DLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYR 470
Query: 277 -----TGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
GY + ++Q L ++ P+ C S+ + +A G+ ++
Sbjct: 471 ACKAHKGYRRAESVSQ--NLLELDPEL-CGSYIFLDKTHASKGNIQDV 515
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 192/443 (43%), Gaps = 53/443 (11%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQRDLVSWNVMLT 60
D +L +F R+ NA+I G NARF + F M P R + +
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 61 GYVRNRRLGDARRLFDSMPQKDVVSWN-----AMLSGYAQNGYADEAREVFYQMPHK--- 112
+ R LG R + K+ V + +++ YA+ G A +VF + P +
Sbjct: 137 SKLGFRWLG---RALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKK 193
Query: 113 -NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM 171
+ + WN L+ Y + A LF S + SW+ L+ G+V L A++LF+ M
Sbjct: 194 ESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELM 253
Query: 172 HVRDVVSWNTMISGYAQDGDMSQAKN----LFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
++VVSW T+I+G++Q GD A + + ++ + +T A++S ++G L
Sbjct: 254 PEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSG- 312
Query: 228 TFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQ 287
+ GY+ N + + R + A ++ Y + G++
Sbjct: 313 ---------------IRIHGYILDNGIKLDRAIGTA-----------LVDMYAKCGELDC 346
Query: 288 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 347
A +F M +D +SW A+I G+A G + +A+ F ++ GE + F L+ C +
Sbjct: 347 AATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLN 406
Query: 348 IAALELGKQIHGQVVKTGYETGCFVGNALL--GMYFKCGSIGEANDVFEGIE-EKDVVSW 404
+ ++LG ++ Y + + +L + + G + EA+++ E + D+ +W
Sbjct: 407 SSEVDLGLNFFDS-MRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTW 465
Query: 405 NTMIAGYARHGFGKQALMVFESM 427
+ H ++A V +++
Sbjct: 466 AALYRACKAHKGYRRAESVSQNL 488
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 112/279 (40%), Gaps = 54/279 (19%)
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
S + S F + C D A+L + +H Q+++ G + + + C S+ ++ D
Sbjct: 26 SPDESHFISLIHACKDTASL---RHVHAQILRRG-----VLSSRVAAQLVSCSSLLKSPD 77
Query: 392 ----VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
+F EE++ N +I G + + ++ F M +GVKPD +T VL + S
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 448 HAG---------------LIDRGTEYFYSMNKDYSVTPSSKH------------------ 474
G +D + S+ Y+ T KH
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 475 -YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE-KAAEMVFK 532
+ +I+ RA + A L R+MP E + SW L I G + GE A+ +F+
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMP-ERNSGSWSTL-----IKGYVDSGELNRAKQLFE 251
Query: 533 MEPH-NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
+ P N + L N ++ +G + A + M + G++
Sbjct: 252 LMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/651 (35%), Positives = 363/651 (55%), Gaps = 39/651 (5%)
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW 143
+S + ++ + G D AR+VF M ++ ++WN L+A + + R +EA ++
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRL---- 155
Query: 144 ELISWNCLMGGFVKRKMLGAARKL-FDK-------------MHVRDVVSWNTMISGYAQD 189
+I+ N L + + A L +K + V +V + ++ Y +
Sbjct: 156 -MITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKF 214
Query: 190 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMV 245
G +AK + D+ +DV TA++ GY Q G EA F M Q NE +Y +++
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
Query: 246 AGY-----VQSNKMD---MARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ 297
+ + K+ M + FE+ ++S +++T Y + + + ++F +
Sbjct: 275 ISCGNLKDIGNGKLIHGLMVKSGFESA----LASQTSLLTMYLRCSLVDDSLRVFKCIEY 330
Query: 298 RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI 357
+ VSW ++ISG Q G E AL F ++ RD N T S AL C+++A E G+QI
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 358 HGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFG 417
HG V K G++ + G+ L+ +Y KCG A VF+ + E DV+S NTMI YA++GFG
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 450
Query: 418 KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC 477
++AL +FE M +G++P+++T++ VL AC+++ L++ G E F S KD + ++ HY C
Sbjct: 451 REALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYAC 509
Query: 478 MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHN 537
M+DLLGRAGRLEEA+ L + P W LL A ++H E+ E+ + ++EP +
Sbjct: 510 MVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGD 568
Query: 538 SGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCF-HPE 596
G +L+SNLYA++G+W M+S+M+D+ ++K SWVE+ + H F GD F HP
Sbjct: 569 EGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPN 628
Query: 597 KDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGR 656
++I LEEL K + GYV V D+EE KE L HSEKLA+AF + G
Sbjct: 629 SEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR-NVGG 687
Query: 657 PIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
IR++KNLRVC DCH+ IK +S+++ R II RDS RFHHF +G CSCGDYW
Sbjct: 688 SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 206/484 (42%), Gaps = 71/484 (14%)
Query: 20 SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP 79
+ +S + ++ L+ AR +FD M +R +V+WN ++ +++RR +A ++ M
Sbjct: 98 AEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMI 157
Query: 80 QKDVVSWNAMLSGYAQNGYADEAREVFYQMPH----------KNAISWNGLLAAYVHNGR 129
+V+ LS + ++D + E Q H N + L+ YV G+
Sbjct: 158 TNNVLPDEYTLSSVFK-AFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 130 IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISG 185
EA + D + +++ L+ G+ ++ A K F M V V ++ +++
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 186 YAQDGDMSQAK---NLFDQSPHQDVF-TWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY 241
D+ K L +S + + T++++ Y++ ++D++ F + N++S+
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSW 336
Query: 242 NAMVAGYVQSNKMDMARELFEAM------PS----------------------------- 266
++++G VQ+ + +MA F M P+
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Query: 267 ----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 322
R+ + + +I YG+ G AR +FD + + D +S +I YAQ G EAL++
Sbjct: 397 YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDL 456
Query: 323 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQI-----HGQVVKTGYETGCFVGNALL 377
F + G N T L C + +E G ++ +++ T C V LL
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVD--LL 514
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP-DE 436
G + G + EA + + D+V W T+++ H + A + + K + ++P DE
Sbjct: 515 G---RAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERI--TRKILEIEPGDE 569
Query: 437 ITMV 440
T++
Sbjct: 570 GTLI 573
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 49/233 (21%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWN---- 56
+R D +LRVF + + VS+ ++ISG ++N R +A F KM RD + N
Sbjct: 313 LRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM-MRDSIKPNSFTL 371
Query: 57 ----------------------VMLTGYVRNRRLGD--------------ARRLFDSMPQ 80
V G+ R++ G AR +FD++ +
Sbjct: 372 SSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSE 431
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRL 136
DV+S N M+ YAQNG+ EA ++F +M N ++ +L A ++ +EE C L
Sbjct: 432 VDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCEL 491
Query: 137 FDS-KSDWELIS---WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 185
FDS + D +++ + C++ + L A L ++ D+V W T++S
Sbjct: 492 FDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 138/298 (46%), Gaps = 25/298 (8%)
Query: 52 LVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD----EAREVFY 107
L S +LT Y+R + D+ R+F + + VSW +++SG QNG + E R++
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 108 QMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGA 163
N+ + + L + EE ++ + D + + + L+ + K
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM 421
Query: 164 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH-----QDVFTWTAMVSGYV 218
AR +FD + DV+S NTMI YAQ+G +A +LF++ + DV + +++
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN- 480
Query: 219 QNGMLDEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN 273
+ +++E FD +K++I Y MV ++ +++ A L + + ++ W
Sbjct: 481 NSRLVEEGCELFDSF-RKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWR 539
Query: 274 TMITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
T+++ + + A RK+ ++ P D + + + YA TG + + M ++K
Sbjct: 540 TLLSACKVHRKVEMAERITRKILEIEPG-DEGTLILMSNLYASTGKWNRVIEMKSKMK 596
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 249/741 (33%), Positives = 387/741 (52%), Gaps = 67/741 (9%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM-----P 79
NA ++ ++R A +F KM +R+L SWNV++ GY + +A L+ M
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 80 QKDVVSW-----------------------------------NAMLSGYAQNGYADEARE 104
+ DV ++ NA+++ Y + G AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 105 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS----KSDWELISWNCLMGGFVKRKM 160
+F +MP ++ ISWN +++ Y NG E LF + D +L++ ++ ++
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC---EL 309
Query: 161 LGAARKLFDKMHVR--------DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 212
LG R+L +H D+ N++ Y G +A+ LF + +D+ +WT
Sbjct: 310 LGD-RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 213 MVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFE-AMPSR 267
M+SGY N + D+A + M Q +EI+ A+++ +D EL + A+ +R
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 268 NVS---SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 324
+S N +I Y + I +A +F +P+++ +SW +II+G EAL
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 325 EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 384
++K + N T + AL+ CA I AL GK+IH V++TG F+ NALL MY +CG
Sbjct: 489 QMKMTLQP-NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 547
Query: 385 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 444
+ A F ++KDV SWN ++ GY+ G G + +F+ M V+PDEIT + +L
Sbjct: 548 RMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLC 606
Query: 445 ACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPA 504
CS + ++ +G YF M +DY VTP+ KHY C++DLLGRAG L+EA ++ MP P
Sbjct: 607 GCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP 665
Query: 505 ASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 564
A WGALL A RIH +LGE +A+ +F+++ + G Y+LL NLYA G+W + +R M
Sbjct: 666 AVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMM 725
Query: 565 RDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVL 624
++ G+ G SWVEV+ K+H F D +HP+ I LE KM G ++
Sbjct: 726 KENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSS 785
Query: 625 HDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRL 684
D E ++ + HSE+ A+AFG++ G PI V KNL +CE+CH+ +K ISK V R
Sbjct: 786 MDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRRE 845
Query: 685 IILRDSHRFHHFNEGICSCGD 705
I +RD+ FHHF +G CSCGD
Sbjct: 846 ISVRDAEHFHHFKDGECSCGD 866
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 13/306 (4%)
Query: 216 GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARE--------LFEAMPSR 267
G NG L+EA + M + + V+ + A+E +M S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
V N + + + G++ A +F M +R+ SW ++ GYA+ G+++EA+ ++ +
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 328 -RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
G + TF C L TC I L GK++H VV+ GYE V NAL+ MY KCG +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 387 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
A +F+ + +D++SWN MI+GY +G + L +F +M+ + V PD +T+ V+SAC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 447 SHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 505
G G + + Y + ++V S + + L AG EA+ L M
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL--NAGSWREAEKLFSRME-RKDIV 364
Query: 506 SWGALL 511
SW ++
Sbjct: 365 SWTTMI 370
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 142/345 (41%), Gaps = 52/345 (15%)
Query: 307 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 366
+ G G EEA+ + ++ +++ F + C A E G +++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 367 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 426
G +GNA L M+ + G++ +A VF + E+++ SWN ++ GYA+ G+ +A+ ++
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 427 MKTI-GVKPDEITMVGVLSACSHAGLIDRGTE-------YFYSMNKDYSVTPSSKHYTC- 477
M + GVKPD T VL C + RG E Y Y ++ D + + C
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 478 ----------------------MIDLLGRAGRLEEAQDL---MRNMPFEPPAASWGALLG 512
MI G E +L MR + +P + +++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 513 ASRIHGNTELGEKAAEMVFKMEPHNSGMYV------LLSNLYAASGRWADAGNMRSRM-- 564
A + G+ LG V +G V L+ +Y +G W +A + SRM
Sbjct: 306 ACELLGDRRLGRDIHAYVI-----TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER 360
Query: 565 RDVG--VQKVTGYSWVEVQNK---IHKFTVGDCFHPEKDRIYAFL 604
+D+ ++GY + + +K ++ D P++ + A L
Sbjct: 361 KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/688 (33%), Positives = 365/688 (53%), Gaps = 69/688 (10%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM- 109
+L++ N ++ Y + R A ++FDSMP+++VVSW+A++SG+ NG + +F +M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 110 -----PHKNAISWN----GLLAAYVHNGRIEEACRLFDSKSDWELI--SWNCLMGGFVKR 158
P++ S N GLL A +I C K +E++ N L+ + K
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL----KIGFEMMVEVGNSLVDMYSKC 155
Query: 159 KMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF------DQSPHQDVFTWTA 212
+ A K+F ++ R ++SWN MI+G+ G S+A + F + D FT T+
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
Query: 213 MVSGYVQNGMLDEARTFFD-------QMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 265
++ GM+ + P I+ ++V YV+ + AR+ F+ +
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT-GSLVDLYVKCGYLFSARKAFDQIK 274
Query: 266 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 325
+ + SW+++I GY Q G+ + EA+ +F
Sbjct: 275 EKTMISWSSLILGYAQEGE-------------------------------FVEAMGLFKR 303
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK--TGYETGCFVGNALLGMYFKC 383
++ ++ S + AD A L GKQ+ VK +G ET V N+++ MY KC
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSVVDMYLKC 361
Query: 384 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 443
G + EA F ++ KDV+SW +I GY +HG GK+++ +F M ++PDE+ + VL
Sbjct: 362 GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421
Query: 444 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 503
SACSH+G+I G E F + + + + P +HY C++DLLGRAGRL+EA+ L+ MP +P
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN 481
Query: 504 AASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSR 563
W LL R+HG+ ELG++ +++ +++ N YV++SNLY +G W + GN R
Sbjct: 482 VGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAREL 541
Query: 564 MRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE-GYVSSTKL 622
G++K G SWVE++ ++H F G+ HP I L+E + ++R E GYV K
Sbjct: 542 GNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKH 601
Query: 623 VLHDVEEEEKEHMLKYHSEKLAVAFGILT---IPAGRPIRVIKNLRVCEDCHNAIKHISK 679
LHD+++E KE L+ HSEKLA+ + T G+ IRV KNLRVC DCH IK +SK
Sbjct: 602 ELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSK 661
Query: 680 IVGRLIILRDSHRFHHFNEGICSCGDYW 707
I ++RD+ RFH F +G CSCGDYW
Sbjct: 662 ITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 175/378 (46%), Gaps = 63/378 (16%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQRDLVSWNVMLTG- 61
A +VF++MP R+ VS++A++SG++ N + LF +M P S N+ G
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 62 --------------------------------YVRNRRLGDARRLFDSMPQKDVVSWNAM 89
Y + R+ +A ++F + + ++SWNAM
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 90 LSGYAQNGYADEAREVFYQMPHKN------AISWNGLLAAYVHNGRIEEACRL--FDSKS 141
++G+ GY +A + F M N + LL A G I ++ F +S
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 142 DWELISWNCLMGG----FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKN 197
+ S + G +VK L +ARK FD++ + ++SW+++I GYAQ+G+ +A
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 198 LFDQ----SPHQDVFTWTAMVSGYVQNGMLDEAR---TFFDQMPQKNEIS-YNAMVAGYV 249
LF + + D F ++++ + +L + + ++P E S N++V Y+
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 250 QSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAA 305
+ +D A + F M ++V SW +ITGYG++G ++ ++F M + D V + A
Sbjct: 360 KCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 419
Query: 306 IISGYAQTGHYEEALNMF 323
++S + +G +E +F
Sbjct: 420 VLSACSHSGMIKEGEELF 437
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 128/303 (42%), Gaps = 37/303 (12%)
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
R L C + G Q+H ++K+G N L+ MY KC A VF
Sbjct: 5 QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 453
+ + E++VVSW+ +++G+ +G K +L +F M G+ P+E T L AC ++
Sbjct: 65 DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE 124
Query: 454 RGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
+G + + + + + + + ++D+ + GR+ EA+ + R + + SW A++
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGN--SLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMI- 180
Query: 513 ASRIHGNTELGEKAAEMVFKMEPHN----SGMYVLLSNLYAASGRWADAGNMRSRMRDVG 568
A +H G KA + M+ N + L S L A S
Sbjct: 181 AGFVHAG--YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS---------------- 222
Query: 569 VQKVTGYSWVEVQNKIHKFTVGDCFH-PEKDRIYAFLEELDLKMRREGYVSSTKLVLHDV 627
TG + Q IH F V FH P I L +L +K GY+ S + +
Sbjct: 223 ----TGMIYAGKQ--IHGFLVRSGFHCPSSATITGSLVDLYVKC---GYLFSARKAFDQI 273
Query: 628 EEE 630
+E+
Sbjct: 274 KEK 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/322 (18%), Positives = 142/322 (44%), Gaps = 45/322 (13%)
Query: 17 PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFD 76
P ++++ +++ Y++ AR FD++ ++ ++SW+ ++ GY + +A LF
Sbjct: 244 PSSATIT-GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 77 SM----PQKDVVSWNAMLSGYAQNGYADEARE---VFYQMPHKNAIS-WNGLLAAYVHNG 128
+ Q D + ++++ +A + ++ + ++P S N ++ Y+ G
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 129 RIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQ 188
++EA + F ++ISW ++ G+ K + + ++F +M ++
Sbjct: 363 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI------------ 410
Query: 189 DGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNA 243
D + A++S +GM+ E F ++ + + I Y
Sbjct: 411 ---------------EPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 455
Query: 244 MVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC-- 300
+V ++ ++ A+ L + MP + NV W T+++ +GDI +++ ++ + D
Sbjct: 456 VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKN 515
Query: 301 -VSWAAIISGYAQTGHYEEALN 321
++ + + Y Q G++ E N
Sbjct: 516 PANYVMMSNLYGQAGYWNEQGN 537
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/581 (36%), Positives = 330/581 (56%), Gaps = 32/581 (5%)
Query: 151 LMGGFVK------RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----- 199
L+G FVK K L A ++ D+ + + N+MI + + ++ + +
Sbjct: 40 LVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILS 99
Query: 200 ---DQSPHQDVFTWTAMV----------SGYVQNGMLDEARTFFDQMPQKNEISYNAMVA 246
D P D +T +V +G +GM R FD P +++
Sbjct: 100 SGNDLKP--DNYTVNFLVQACTGLRMRETGLQVHGM--TIRRGFDNDPHVQ----TGLIS 151
Query: 247 GYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAI 306
Y + +D ++F ++P + M+T + GD+ ARKLF+ MP+RD ++W A+
Sbjct: 152 LYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAM 211
Query: 307 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 366
ISGYAQ G EALN+F ++ +G +N LS C + AL+ G+ H + +
Sbjct: 212 ISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKI 271
Query: 367 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 426
+ + L+ +Y KCG + +A +VF G+EEK+V +W++ + G A +GFG++ L +F
Sbjct: 272 KITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSL 331
Query: 427 MKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAG 486
MK GV P+ +T V VL CS G +D G +F SM ++ + P +HY C++DL RAG
Sbjct: 332 MKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAG 391
Query: 487 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN 546
RLE+A +++ MP +P AA W +LL ASR++ N ELG A++ + ++E N G YVLLSN
Sbjct: 392 RLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSN 451
Query: 547 LYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEE 606
+YA S W + ++R M+ GV+K G S +EV ++H+F VGD HP+ +I A ++
Sbjct: 452 IYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKD 511
Query: 607 LDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRV 666
+ ++R GY + T V+ D++EEEKE L HSEK A+AFGI+++ PIR++KNLRV
Sbjct: 512 ISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRV 571
Query: 667 CEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
C DCH ISKI R II+RD +RFHHF +G CSC +W
Sbjct: 572 CGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 132/297 (44%), Gaps = 41/297 (13%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
+IS Y +F+ +P D V M+T R + AR+LF+ MP++D +
Sbjct: 147 TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSK 140
+WNAM+SGYAQ G + EA VF+ M + N ++ +L+A G +++
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG------- 259
Query: 141 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD 200
W +++R + +L T++ YA+ GDM +A +F
Sbjct: 260 ------RW---AHSYIERNKIKITVRL-----------ATTLVDLYAKCGDMEKAMEVFW 299
Query: 201 QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDM 256
++V+TW++ ++G NG ++ F M Q N +++ +++ G +D
Sbjct: 300 GMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDE 359
Query: 257 ARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRD-CVSWAAII 307
+ F++M + + + ++ Y + G + A + MP + W++++
Sbjct: 360 GQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G DS +VFN++P V AM++ R AR LF+ MP+RD ++WN M++GY
Sbjct: 157 GCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYA 216
Query: 64 RNRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG 119
+ +A +F M + V V+ ++LS Q G D+ R W
Sbjct: 217 QVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGR-------------WA- 262
Query: 120 LLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 179
+Y+ +I+ RL + D + K + A ++F M ++V +W
Sbjct: 263 --HSYIERNKIKITVRLATTLVDL-----------YAKCGDMEKAMEVFWGMEEKNVYTW 309
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
++ ++G A +G + LF V T+ +++ G G +DE + FD M
Sbjct: 310 SSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM-- 367
Query: 236 KNEIS-------YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMI 276
+NE Y +V Y ++ +++ A + + MP + + + W++++
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 123/296 (41%), Gaps = 35/296 (11%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL-VSWNVMLT 60
R G A ++F MP R +++NAMISGY + A ++F M + V+ M++
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 61 GYVRNRRLG--DARRLFDSMPQKDVVSWNAMLSG-----YAQNGYADEAREVFYQMPHKN 113
+LG D R S +++ + L+ YA+ G ++A EVF+ M KN
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 114 AISWNGLLAAYVHNGRIEEACRLFD-SKSD--------WELISWNCLMGGFVKRKMLGAA 164
+W+ L NG E+ LF K D + + C + GFV
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDE-----G 360
Query: 165 RKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQ---SPHQDVFTWTAMVSG 216
++ FD M + + ++ YA+ G + A ++ Q PH V++ S
Sbjct: 361 QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASR 420
Query: 217 YVQN---GMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 269
+N G+L + ++ N +Y + Y SN D + ++M S+ V
Sbjct: 421 MYKNLELGVLASKKML--ELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGV 474
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/542 (38%), Positives = 308/542 (56%), Gaps = 49/542 (9%)
Query: 208 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS--YNAMVAGYVQSNKMDMARELFEAMP 265
F TA++S Y + G++ +AR F++ PQ +++S YNA+++GY ++K+ A +F M
Sbjct: 89 FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMK 148
Query: 266 SRNVSS------------------W---------------------NTMITGYGQNGDIA 286
VS W N+ IT Y + G +
Sbjct: 149 ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVE 208
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
R+LFD MP + ++W A+ISGY+Q G + L ++ ++K G + T LS+CA
Sbjct: 209 AGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCA 268
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 406
+ A ++G ++ V G+ FV NA + MY +CG++ +A VF+ + K +VSW
Sbjct: 269 HLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTA 328
Query: 407 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 466
MI Y HG G+ LM+F+ M G++PD V VLSACSH+GL D+G E F +M ++Y
Sbjct: 329 MIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREY 388
Query: 467 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 526
+ P +HY+C++DLLGRAGRL+EA + + +MP EP A WGALLGA +IH N ++ E A
Sbjct: 389 KLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELA 448
Query: 527 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHK 586
V + EP+N G YVL+SN+Y+ S +R MR+ +K GYS+VE + ++H
Sbjct: 449 FAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHL 508
Query: 587 FTVGDCFHPEKDRIYAFLEELDLK-MRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAV 645
F GD H + + ++ L+EL+ M G + + EE + HSE+LA+
Sbjct: 509 FLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDR-------GEEVSSTTREHSERLAI 561
Query: 646 AFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGD 705
AFGIL G I VIKNLRVCEDCH +K +SKIV R ++RD+ RFH+F +G+CSC D
Sbjct: 562 AFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKD 621
Query: 706 YW 707
YW
Sbjct: 622 YW 623
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 24/372 (6%)
Query: 87 NAMLSGYAQNGYADEAREVFYQMPHKNAIS--WNGLLAAYVHNGRIEEACRLFDSKSDWE 144
A++S Y + G +AR+VF + P + +S +N L++ Y N ++ +A +F +
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 145 LISWNCLMGGFVKRKMLGAARKLFDKMHVR--------DVVSWNTMISGYAQDGDMSQAK 196
+ + M G V + L +H + +V N+ I+ Y + G + +
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211
Query: 197 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSN 252
LFD+ P + + TW A++SGY QNG+ + ++QM + + ++++
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 253 KMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 308
+ E+ + + S NV N I+ Y + G++A+AR +FD+MP + VSW A+I
Sbjct: 272 AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 331
Query: 309 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY-- 366
Y G E L +F ++ + G + + F LS C+ + G ++ + +K Y
Sbjct: 332 CYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF-RAMKREYKL 390
Query: 367 ETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHGFGKQALMVFE 425
E G + L+ + + G + EA + E + E D W ++ H A + F
Sbjct: 391 EPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFA 450
Query: 426 SMKTIGVKPDEI 437
K I +P+ I
Sbjct: 451 --KVIEFEPNNI 460
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 143/302 (47%), Gaps = 34/302 (11%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVS--WNAMLSGYAQNGYADEAREVFYQMPHK- 112
+++ Y + + DAR++F+ PQ +S +NA++SGY N +A +F +M
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 113 ---NAISWNGL-----LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 164
++++ GL + Y+ GR + D E+ N + ++K + A
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHG-QCVKGGLDSEVAVLNSFITMYMKCGSVEAG 210
Query: 165 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYV-- 218
R+LFD+M V+ +++WN +ISGY+Q+G L++Q D FT +++S
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHL 270
Query: 219 -------QNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS 271
+ G L E+ F N NA ++ Y + + AR +F+ MP +++ S
Sbjct: 271 GAKKIGHEVGKLVESNGFV-----PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVS 325
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIK 327
W MI YG +G LFD M +R D + ++S + +G ++ L +F +K
Sbjct: 326 WTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMK 385
Query: 328 RD 329
R+
Sbjct: 386 RE 387
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 153/334 (45%), Gaps = 28/334 (8%)
Query: 2 RNGHCDSALRVFNTMPRRS--SVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVML 59
+ G A +VF P+ S SV YNA+ISGY N++ + A +F +M + + +V +
Sbjct: 100 KCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTM 159
Query: 60 TGYVRNRRLGDARRLFDSMPQK--------DVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
G V + + L S+ + +V N+ ++ Y + G + R +F +MP
Sbjct: 160 LGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPV 219
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFDS-KSDWELISWNCLMGGFVKRKMLGAAR----- 165
K I+WN +++ Y NG + L++ KS L+ LGA +
Sbjct: 220 KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEV 279
Query: 166 -KLFDKM-HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 223
KL + V +V N IS YA+ G++++A+ +FD P + + +WTAM+ Y +GM
Sbjct: 280 GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMG 339
Query: 224 DEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNT 274
+ FD M ++ + + +++ S D ELF AM ++
Sbjct: 340 EIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC 399
Query: 275 MITGYGQNGDIAQARKLFDMMP-QRDCVSWAAII 307
++ G+ G + +A + + MP + D W A++
Sbjct: 400 LVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 303 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 362
W + A + E+++++ + R G S + +F L +CA ++ G+Q+H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 363 KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS--WNTMIAGYARHGFGKQA 420
K G ET FV AL+ MY KCG + +A VFE + +S +N +I+GY + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 421 LMVFESMKTIGVKPDEITMVGVLSACS 447
+F MK GV D +TM+G++ C+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT 167
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 26/259 (10%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 81
N+ I+ Y++ R LFD+MP + L++WN +++GY +N D L++ M
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 82 -DVVSWNAMLSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRL 136
D + ++LS A G EV + N N ++ Y G + +A +
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 137 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDM 192
FD L+SW ++G + M LFD M R D + ++S + G
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 193 SQAKNLF---------DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP-QKNEISYN 242
+ LF + P ++ +V + G LDEA F + MP + + +
Sbjct: 375 DKGLELFRAMKREYKLEPGPEH----YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWG 430
Query: 243 AMVAGYVQSNKMDMARELF 261
A++ +DMA F
Sbjct: 431 ALLGACKIHKNVDMAELAF 449
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 247/779 (31%), Positives = 377/779 (48%), Gaps = 103/779 (13%)
Query: 27 MISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVS- 85
++S Y + + AR +FD M +R+L +W+ M+ Y R R + +LF M + V+
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 86 --------------------------------------WNAMLSGYAQNGYADEAREVFY 107
N++L+ YA+ G D A + F
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 240
Query: 108 QMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGA 163
+M ++ I+WN +L AY NG+ EEA L L++WN L+GG+ + A
Sbjct: 241 RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDA 300
Query: 164 ARKLFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQ------SPH--------- 204
A L KM DV +W MISG +G QA ++F + P+
Sbjct: 301 AMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS 360
Query: 205 ------------------------QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS 240
DV ++V Y + G L++AR FD + K+ +
Sbjct: 361 ACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT 420
Query: 241 YNAMVAGYVQSNKMDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFDMMP 296
+N+M+ GY Q+ A ELF M N + +WNTMI+GY +NGD +A LF M
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRME 480
Query: 297 -----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
QR+ +W II+GY Q G +EAL +F +++ N T L CA++
Sbjct: 481 KDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGA 540
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
++ ++IHG V++ + V NAL Y K G I + +F G+E KD+++WN++I GY
Sbjct: 541 KMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGY 600
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
HG AL +F MKT G+ P+ T+ ++ A G +D G + FYS+ DY + P+
Sbjct: 601 VLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPA 660
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 531
+H + M+ L GRA RLEEA ++ M + W + L RIHG+ ++ AAE +F
Sbjct: 661 LEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLF 720
Query: 532 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD 591
+EP N+ ++S +YA + + RD ++K G SW+EV+N IH FT GD
Sbjct: 721 SLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGD 780
Query: 592 CFHPEKDRIYAFLEELD-LKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 650
D +Y +E++ L R + Y +EEE +E HSEK A+AFG++
Sbjct: 781 QSKLCTDVLYPLVEKMSRLDNRSDQYNGELW-----IEEEGREETCGIHSEKFAMAFGLI 835
Query: 651 TIPAGR--PIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+ IR++KNLR+C DCH+ K++SK G I+L D+ HHF G CSC DYW
Sbjct: 836 SSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 172/375 (45%), Gaps = 22/375 (5%)
Query: 219 QNGMLDEAR----TFFDQMPQKNEISYNAMVAGYVQSNKMDMAREL---FEAMPSRNVSS 271
+NG L EA + F Q + +Y ++ + S + + R L F +V
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFV 117
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 331
+++ Y + G IA ARK+FD M +R+ +W+A+I Y++ + E +F + +DG
Sbjct: 118 ETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV 177
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
+ F L CA+ +E GK IH V+K G + V N++L +Y KCG + A
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 392 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
F + E+DV++WN+++ Y ++G ++A+ + + M+ G+ P +T ++ + G
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE---PPAASWG 508
D + M + + +T +T MI L G +A D+ R M P A +
Sbjct: 298 CDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 509 ALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN----LYAASGRWADAGNMRSRM 564
+ + A G + + KM + VL+ N +Y+ G+ DA + +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDD---VLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 565 RDVGV----QKVTGY 575
++ V +TGY
Sbjct: 414 KNKDVYTWNSMITGY 428
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 174/392 (44%), Gaps = 71/392 (18%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP----Q 80
N+++ Y + + AR +FD + +D+ +WN M+TGY + G A LF M +
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMP-----HKNAISWNGLLAAYVHNGRIEEACR 135
++++WN M+SGY +NG EA ++F +M +N +WN ++A Y+ NG+ +EA
Sbjct: 451 PNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 136 LF----------DSKSDWELI-SWNCLMGGFVKRKMLGAA-RKLFDKMHVRDVVSWNTMI 183
LF +S + L+ + L+G + R++ G R+ D +H N +
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK----NALT 566
Query: 184 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNA 243
YA+ GD+ ++ +F +D+ TW +++ GYV +G A F+QM +
Sbjct: 567 DTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQG------ 620
Query: 244 MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF-------DMMP 296
P+R S ++I +G G++ + +K+F ++P
Sbjct: 621 -------------------ITPNRGTLS--SIILAHGLMGNVDEGKKVFYSIANDYHIIP 659
Query: 297 QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF--SC--------ALSTCA 346
+ S A++ Y + EEAL E+ E+ +F C A+
Sbjct: 660 ALEHCS--AMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAE 717
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLG 378
++ +LE +V Y G +G +L G
Sbjct: 718 NLFSLEPENTATESIVSQIYALGAKLGRSLEG 749
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 158/326 (48%), Gaps = 33/326 (10%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL----VSWNVML 59
G + A +VF+++ + ++N+MI+GY + A +LF +M +L ++WN M+
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 60 TGYVRNRRLGDARRLFDSMP-----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK-- 112
+GY++N G+A LF M Q++ +WN +++GY QNG DEA E+F +M
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 113 --NAISWNGLLAAYVH-----NGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 165
N+++ LL A + R C L + + N L + K + +R
Sbjct: 521 MPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK-NALTDTYAKSGDIEYSR 579
Query: 166 KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF----TWTAMVSGYVQNG 221
+F M +D+++WN++I GY G A LF+Q Q + T ++++ + G
Sbjct: 580 TIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMG 639
Query: 222 MLDEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTM 275
+DE + F + I +AMV Y ++N+++ A + + M ++ + W +
Sbjct: 640 NVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESF 699
Query: 276 ITGYGQNGDIAQ----ARKLFDMMPQ 297
+TG +GDI A LF + P+
Sbjct: 700 LTGCRIHGDIDMAIHAAENLFSLEPE 725
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 179/422 (42%), Gaps = 93/422 (22%)
Query: 206 DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 265
DVF T ++S Y + G + +AR FD M ++N +++AM+ Y + N+ +LF M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 266 SRNV-----------------------------------SSW----NTMITGYGQNGDIA 286
V SS N+++ Y + G++
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
A K F M +RD ++W +++ Y Q G +EEA+ + E++++G S
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS-------------- 279
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE----EKDVV 402
G N L+G Y + G A D+ + +E DV
Sbjct: 280 ---------------------PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVF 318
Query: 403 SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSM 462
+W MI+G +G QAL +F M GV P+ +T++ +SACS +I++G+E +S+
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE-VHSI 377
Query: 463 NKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTEL 522
++D+ + G+LE+A+ + ++ +W ++ I G +
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK-NKDVYTWNSM-----ITGYCQA 431
Query: 523 GE--KAAEMVFKMEPHNSGMYVLLSNL----YAASGRWADAGNMRSRM-RDVGVQKVTGY 575
G KA E+ +M+ N ++ N Y +G +A ++ RM +D VQ+ T
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTA- 490
Query: 576 SW 577
+W
Sbjct: 491 TW 492
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 321/546 (58%), Gaps = 27/546 (4%)
Query: 66 RRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYV 125
R+ A R+F+ + + +V N+++ +AQN +A VF +M GL A
Sbjct: 65 RQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQR------FGLFADNF 118
Query: 126 HNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 185
+ +AC S W + +M +++ L + D+ N +I
Sbjct: 119 TYPFLLKAC----SGQSW--LPVVKMMHNHIEKLGLSS-----------DIYVPNALIDC 161
Query: 186 YAQDGDMS--QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNA 243
Y++ G + A LF++ +D +W +M+ G V+ G L +AR FD+MPQ++ IS+N
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNT 221
Query: 244 MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP--QRDCV 301
M+ GY + +M A ELFE MP RN SW+TM+ GY + GD+ AR +FD MP ++ V
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVV 281
Query: 302 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 361
+W II+GYA+ G +EA + ++ G + + L+ C + L LG +IH +
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Query: 362 VKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 421
++ + +V NALL MY KCG++ +A DVF I +KD+VSWNTM+ G HG GK+A+
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAI 401
Query: 422 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL 481
+F M+ G++PD++T + VL +C+HAGLID G +YFYSM K Y + P +HY C++DL
Sbjct: 402 ELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDL 461
Query: 482 LGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMY 541
LGR GRL+EA +++ MP EP WGALLGA R+H ++ ++ + + K++P + G Y
Sbjct: 462 LGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNY 521
Query: 542 VLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIY 601
LLSN+YAA+ W ++RS+M+ +GV+K +G S VE+++ IH+FTV D HP+ D+IY
Sbjct: 522 SLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Query: 602 AFLEEL 607
L L
Sbjct: 582 QMLGSL 587
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 170/319 (53%), Gaps = 20/319 (6%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRL 68
A+++F M R +VS+N+M+ G ++ AR LFD+MPQRDL+SWN ML GY R R +
Sbjct: 173 AMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREM 232
Query: 69 GDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM--PHKNAISWNGLLAAYVH 126
A LF+ MP+++ VSW+ M+ GY++ G + AR +F +M P KN ++W ++A Y
Sbjct: 233 SKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAE 292
Query: 127 NGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS---- 178
G ++EA RL D S ++ + ++ + +L ++ + ++ S
Sbjct: 293 KGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYV 352
Query: 179 WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-- 236
N ++ YA+ G++ +A ++F+ P +D+ +W M+ G +G EA F +M ++
Sbjct: 353 LNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI 412
Query: 237 --NEISYNAMVAGYVQSNKMDMARELFEAMPS-----RNVSSWNTMITGYGQNGDIAQAR 289
+++++ A++ + +D + F +M V + ++ G+ G + +A
Sbjct: 413 RPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAI 472
Query: 290 KLFDMMP-QRDCVSWAAII 307
K+ MP + + V W A++
Sbjct: 473 KVVQTMPMEPNVVIWGALL 491
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 157/321 (48%), Gaps = 24/321 (7%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
++ G A R+F+ MP+R +S+N M+ GY R S A +LF+KMP+R+ VSW+ M+
Sbjct: 196 VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVM 255
Query: 61 GYVRNRRLGDARRLFDSM--PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NA 114
GY + + AR +FD M P K+VV+W +++GYA+ G EA + QM +A
Sbjct: 256 GYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDA 315
Query: 115 ISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS----WNCLMGGFVKRKMLGAARKLFDK 170
+ +LAA +G + R+ L S N L+ + K L A +F+
Sbjct: 316 AAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFND 375
Query: 171 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEA 226
+ +D+VSWNTM+ G G +A LF + + D T+ A++ G++DE
Sbjct: 376 IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG 435
Query: 227 RTFF-------DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITG 278
+F D +PQ Y +V + ++ A ++ + MP NV W ++
Sbjct: 436 IDYFYSMEKVYDLVPQVEH--YGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGA 493
Query: 279 YGQNGDIAQARKLFDMMPQRD 299
+ ++ A+++ D + + D
Sbjct: 494 CRMHNEVDIAKEVLDNLVKLD 514
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 4/181 (2%)
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
+R F L A L KQ+H Q+++ + L+ C A VF
Sbjct: 15 SRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVF 74
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 453
++E +V N++I +A++ QA VF M+ G+ D T +L ACS +
Sbjct: 75 NQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLP 134
Query: 454 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL--EEAQDLMRNMPFEPPAASWGALL 511
+ ++ + ++ +ID R G L +A L M E SW ++L
Sbjct: 135 V-VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSML 192
Query: 512 G 512
G
Sbjct: 193 G 193
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/643 (34%), Positives = 354/643 (55%), Gaps = 56/643 (8%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
+ G+ D A +F MP R+ V+ NAM++GY++ R + A LF +MP +++VSW VMLT
Sbjct: 89 KTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTA 147
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLL 121
+ R DA LFD MP+++VVSWN +++G +NG ++A++VF MP ++ +SWN ++
Sbjct: 148 LCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMI 207
Query: 122 AAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 181
Y+ N +EEA LF S+ +++W ++ G+ + + A +LF +M R++VSW
Sbjct: 208 KGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTA 267
Query: 182 MISGYAQDGDMSQAKNLFDQ--------SPHQDVFTWTAMVSG----------------- 216
MISG+A + +A LF + SP+ + A G
Sbjct: 268 MISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQV 327
Query: 217 ---------------------YVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMD 255
Y +G++ A++ ++ + S N ++ Y+++ ++
Sbjct: 328 ISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDLQSCNIIINRYLKNGDLE 385
Query: 256 MARELFEAMPS-RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG 314
A LFE + S + SW +MI GY + GD+++A LF + +D V+W +ISG Q
Sbjct: 386 RAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNE 445
Query: 315 HYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG--YETGCFV 372
+ EA ++ ++ R G ST+S LS+ + L+ GK IH + KT Y+ +
Sbjct: 446 LFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLIL 505
Query: 373 GNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 432
N+L+ MY KCG+I +A ++F + +KD VSWN+MI G + HG +AL +F+ M G
Sbjct: 506 QNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK 565
Query: 433 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 492
KP+ +T +GVLSACSH+GLI RG E F +M + YS+ P HY MIDLLGRAG+L+EA+
Sbjct: 566 KPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAE 625
Query: 493 DLMRNMPFEPPAASWGALLGASRIHGNTE----LGEKAAEMVFKMEPHNSGMYVLLSNLY 548
+ + +PF P +GALLG ++ + + E+AA + +++P N+ +V L N+Y
Sbjct: 626 EFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVY 685
Query: 549 AASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD 591
A GR MR M GV+K G SWV V + + F GD
Sbjct: 686 AGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGD 728
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 262/537 (48%), Gaps = 75/537 (13%)
Query: 66 RRLGD-----ARRLFDSMPQKD----VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS 116
RRL + AR L D +PQ+ VV W ++LS YA+ GY DEAR +F MP +N ++
Sbjct: 51 RRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVT 110
Query: 117 WNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV 176
N +L YV R+ EA LF ++SW ++ A +LFD+M R+V
Sbjct: 111 CNAMLTGYVKCRRMNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAVELFDEMPERNV 169
Query: 177 VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 236
VSWNT+++G ++GDM +AK +FD P +DV +W AM+ GY++N ++EA+ F M +K
Sbjct: 170 VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK 229
Query: 237 NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP 296
N +++ +MV GY + + A LF MP RN+ SW MI+G+
Sbjct: 230 NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGF----------------- 272
Query: 297 QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD-------GESLNRSTFSCALSTCADIA 349
+W + Y EAL +F+E+K+D GE+L ++C +
Sbjct: 273 -----AWNEL---------YREALMLFLEMKKDVDAVSPNGETLISLAYACG---GLGVE 315
Query: 350 ALELGKQIHGQVVKTGYET---GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 406
LG+Q+H QV+ G+ET + +L+ MY G I A + E D+ S N
Sbjct: 316 FRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNI 373
Query: 407 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 466
+I Y ++G ++A +FE +K++ D+++ ++ AG + R F ++
Sbjct: 374 IINRYLKNGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKD 430
Query: 467 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASRIHGNTELG 523
VT +T MI L + EA L+ +M +P +++ LL ++ N + G
Sbjct: 431 GVT-----WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 524 EKAAEMVFKMEPHNSGMYVL---LSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSW 577
+ ++ K +L L ++YA G DA + ++M VQK T SW
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDT-VSW 537
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/540 (28%), Positives = 262/540 (48%), Gaps = 42/540 (7%)
Query: 18 RRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD----LVSWNVMLTGYVRNRRLGDARR 73
RR + A+I L AR L DK+PQR +V W +L+ Y + L +AR
Sbjct: 39 RRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARV 98
Query: 74 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA 133
LF+ MP++++V+ NAML+GY + +EA +F +MP KN +SW +L A +GR E+A
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDA 157
Query: 134 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 193
LFD + ++SWN L+ G ++ + A+++FD M RDVVSWN MI GY ++ M
Sbjct: 158 VELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGME 217
Query: 194 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNK 253
+AK LF ++V TWT+MV GY + G + EA F +MP++N +S+ AM++G+ +
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNEL 277
Query: 254 MDMARELFEAMPSRNVSSWN----TMIT-GYGQNGDIAQARKLFDMM-PQRDCVSW---- 303
A LF M ++V + + T+I+ Y G + R+L + + Q W
Sbjct: 278 YREALMLFLEM-KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVD 336
Query: 304 ------AAIISGYAQTGHYEEA---LNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 354
+++ YA +G A LN +++ +NR + L + E
Sbjct: 337 HDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETL--FERV 394
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 414
K +H +V T G Y + G + A +F+ + +KD V+W MI+G ++
Sbjct: 395 KSLHDKVSWTSMIDG----------YLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQN 444
Query: 415 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV-TPSSK 473
+A + M G+KP T +LS+ +D+G + K + P
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI 504
Query: 474 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 533
++ + + G +E+A ++ M + SW +++ HG L +KA + +M
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHG---LADKALNLFKEM 560
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 205/421 (48%), Gaps = 59/421 (14%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
+RNG + A +VF+ MP R VS+NAMI GY+ N A+ LF M ++++V+W M+
Sbjct: 180 IRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVY 239
Query: 61 GYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK-NAISWNG 119
GY R + +A RLF MP++++VSW AM+SG+A N EA +F +M +A+S NG
Sbjct: 240 GYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNG 299
Query: 120 ---------------------------------------------LLAAYVHNGRIEEAC 134
L+ Y +G I A
Sbjct: 300 ETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQ 359
Query: 135 RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH-VRDVVSWNTMISGYAQDGDMS 193
L + D L S N ++ ++K L A LF+++ + D VSW +MI GY + GD+S
Sbjct: 360 SLLNESFD--LQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVS 417
Query: 194 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYV 249
+A LF + +D TWT M+SG VQN + EA + M + +Y+ +++
Sbjct: 418 RAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAG 477
Query: 250 QSNKMDMARELF------EAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 303
++ +D + + A ++ N++++ Y + G I A ++F M Q+D VSW
Sbjct: 478 ATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSW 537
Query: 304 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 363
++I G + G ++ALN+F E+ G+ N TF LS C+ + G ++ + +
Sbjct: 538 NSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE 597
Query: 364 T 364
T
Sbjct: 598 T 598
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/550 (36%), Positives = 317/550 (57%), Gaps = 12/550 (2%)
Query: 170 KMHVRDVVSWNTMISGYAQ---DGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA 226
K H+ DV +I+ + + MS A++LF+ D+ + +M GY + E
Sbjct: 54 KSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEV 113
Query: 227 RTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITG 278
+ F ++ + + ++ +++ + ++ R+L + NV T+I
Sbjct: 114 FSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINM 173
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
Y + D+ AR +FD + + V + A+I+GYA+ EAL++F E++ N T
Sbjct: 174 YTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITL 233
Query: 339 SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE 398
LS+CA + +L+LGK IH K + V AL+ M+ KCGS+ +A +FE +
Sbjct: 234 LSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRY 293
Query: 399 KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEY 458
KD +W+ MI YA HG ++++++FE M++ V+PDEIT +G+L+ACSH G ++ G +Y
Sbjct: 294 KDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKY 353
Query: 459 FYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG 518
F M + + PS KHY M+DLL RAG LE+A + + +P P W LL A H
Sbjct: 354 FSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
Query: 519 NTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWV 578
N +L EK +E +F+++ + G YV+LSNLYA + +W ++R M+D KV G S +
Sbjct: 414 NLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSI 473
Query: 579 EVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLH-DVEEEEKEHMLK 637
EV N +H+F GD +++ L+E+ +++ GYV T +V+H ++ ++EKE L+
Sbjct: 474 EVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLR 533
Query: 638 YHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFN 697
YHSEKLA+ FG+L P G IRV+KNLRVC DCHNA K IS I GR ++LRD RFHHF
Sbjct: 534 YHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFE 593
Query: 698 EGICSCGDYW 707
+G CSCGD+W
Sbjct: 594 DGKCSCGDFW 603
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 162/355 (45%), Gaps = 33/355 (9%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 130
AR LF++M + D+V +N+M GY++ E +F + I +G+L +
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVE------ILEDGILPDNYTFPSL 135
Query: 131 EEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDG 190
+AC + +K+ E +CL LG L D ++V T+I+ Y +
Sbjct: 136 LKACAV--AKALEEGRQLHCL------SMKLG----LDDNVYV-----CPTLINMYTECE 178
Query: 191 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVA 246
D+ A+ +FD+ V + AM++GY + +EA + F +M K NEI+ ++++
Sbjct: 179 DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLS 238
Query: 247 GYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGDIAQARKLFDMMPQRDCVS 302
+D+ + + + + + +I + + G + A +F+ M +D +
Sbjct: 239 SCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA 298
Query: 303 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 362
W+A+I YA G E+++ MF ++ + + TF L+ C+ +E G++ Q+V
Sbjct: 299 WSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMV 358
Query: 363 -KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHG 415
K G +++ + + G++ +A + + + + W ++A + H
Sbjct: 359 SKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 18/260 (6%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----N 113
++ Y + AR +FD + + VV +NAM++GYA+ +EA +F +M K N
Sbjct: 170 LINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPN 229
Query: 114 AISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW----NCLMGGFVKRKMLGAARKLFD 169
I+ +L++ G ++ + + L+ F K L A +F+
Sbjct: 230 EITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFE 289
Query: 170 KMHVRDVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDE 225
KM +D +W+ MI YA G ++ +F+ ++ D T+ +++ G ++E
Sbjct: 290 KMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEE 349
Query: 226 ARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGY 279
R +F QM K I Y +MV ++ ++ A E + +P S W ++
Sbjct: 350 GRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAAC 409
Query: 280 GQNGDIAQARKLFDMMPQRD 299
+ ++ A K+ + + + D
Sbjct: 410 SSHNNLDLAEKVSERIFELD 429
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 138/308 (44%), Gaps = 27/308 (8%)
Query: 38 SLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGY 93
S AR LF+ M + D+V +N M GY R + LF + + ++ ++ ++L
Sbjct: 80 SYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKAC 139
Query: 94 AQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW 148
A +E R++ + + K N L+ Y ++ A +FD + ++ +
Sbjct: 140 AVAKALEEGRQL-HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 149 NCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPH 204
N ++ G+ +R A LF +M + + ++ +++S A G + K + +
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 205 QDVFTW----TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMAREL 260
+ TA++ + + G LD+A + F++M K+ +++AM+ Y K + + +
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 261 FEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDCV-----SWAAIISGYA 311
FE M S NV ++ ++ G + + RK F M + + + +++ +
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 312 QTGHYEEA 319
+ G+ E+A
Sbjct: 379 RAGNLEDA 386
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 18/238 (7%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNR 66
DSA VF+ + V YNAMI+GY R R + A LF +M + L + L + +
Sbjct: 181 DSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC 240
Query: 67 RLGDARRLFDSMPQ--------KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN 118
L + L + + K V A++ +A+ G D+A +F +M +K+ +W+
Sbjct: 241 ALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWS 300
Query: 119 GLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMH-- 172
++ AY ++G+ E++ +F+ + I++ L+ + RK F +M
Sbjct: 301 AMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
Query: 173 ---VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV-FTWTAMVSGYVQNGMLDEA 226
V + + +M+ ++ G++ A D+ P W +++ + LD A
Sbjct: 361 FGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 238/767 (31%), Positives = 375/767 (48%), Gaps = 92/767 (11%)
Query: 29 SGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNA 88
SG + AR L RD + Q + + L G+ +R + DA +LFD M + D WN
Sbjct: 42 SGISKPARLVL-RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNV 100
Query: 89 MLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 144
M+ G+ G EA + + +M + ++ ++ + +EE ++
Sbjct: 101 MIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLG 160
Query: 145 LIS----WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD 200
+S N L+ ++K A K+F++M RD+VSWN+MISGY GD + LF
Sbjct: 161 FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK 220
Query: 201 Q------------------------SPHQ----------------DVFTWTAMVSGYVQN 220
+ SP DV T+++ Y +
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 221 GMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN------VSSWN- 273
G + A F+ M Q+N +++N M+ Y ++ ++ A F+ M +N ++S N
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINL 340
Query: 274 -----------------------------TMITGYGQNGDIAQARKLFDMMPQRDCVSWA 304
+I YG+ G + A +FD M +++ +SW
Sbjct: 341 LPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWN 400
Query: 305 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 364
+II+ Y Q G AL +F E+ + +T + L A+ +L G++IH +VK+
Sbjct: 401 SIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS 460
Query: 365 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVF 424
Y + + N+L+ MY CG + +A F I KDVVSWN++I YA HGFG+ ++ +F
Sbjct: 461 RYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLF 520
Query: 425 ESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGR 484
M V P++ T +L+ACS +G++D G EYF SM ++Y + P +HY CM+DL+GR
Sbjct: 521 SEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGR 580
Query: 485 AGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLL 544
G A+ + MPF P A WG+LL ASR H + + E AAE +FKME N+G YVLL
Sbjct: 581 TGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLL 640
Query: 545 SNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFL 604
N+YA +GRW D ++ M G+ + + S VE + K H FT GD H ++IY
Sbjct: 641 LNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIY--- 697
Query: 605 EELDLKMRREG----YVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRV 660
E LD+ R G YV + + + + + + HS +LA FG+++ GR + V
Sbjct: 698 EVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTV 757
Query: 661 IKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
N R+C CH ++ S++ R I++ DS FHHF+ G CSCG+YW
Sbjct: 758 RNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 172/373 (46%), Gaps = 32/373 (8%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQRDLVS 54
M+ G A +VF MP R VS+N+MISGYL + LF +M P R
Sbjct: 176 MKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTM 235
Query: 55 WNVMLTGYVRNRRLGD---ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
+ +V + ++G + + DV+ ++L Y++ G A +F M
Sbjct: 236 SALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ 295
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE------LISWNCLMGGFV--KRKMLGA 163
+N ++WN ++ Y NGR+ +A F S+ + S N L + R + G
Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGY 355
Query: 164 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 223
A + + + +V +I Y + G + A+ +FD+ ++V +W ++++ YVQNG
Sbjct: 356 AMR---RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKN 412
Query: 224 DEARTFFDQM------PQKNEISYNAMVAGYVQSNKMDMARELFE-AMPSR---NVSSWN 273
A F ++ P I+ +++ Y +S + RE+ + SR N N
Sbjct: 413 YSALELFQELWDSSLVPDSTTIA--SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILN 470
Query: 274 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 333
+++ Y GD+ ARK F+ + +D VSW +II YA G ++ +F E+ +
Sbjct: 471 SLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNP 530
Query: 334 NRSTFSCALSTCA 346
N+STF+ L+ C+
Sbjct: 531 NKSTFASLLAACS 543
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 182/424 (42%), Gaps = 65/424 (15%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD------LVSWNV 57
G A R+FN M +R+ V++N MI Y RN R + A F KM +++ + S N+
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINL 340
Query: 58 MLTGYVRNRRL--GDA-RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA 114
+ + R G A RR F +P +V A++ Y + G A +F +M KN
Sbjct: 341 LPASAILEGRTIHGYAMRRGF--LPH--MVLETALIDMYGECGQLKSAEVIFDRMAEKNV 396
Query: 115 ISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRKMLGAARK---- 166
ISWN ++AAYV NG+ A LF D L+ + ++ + + L R+
Sbjct: 397 ISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAY 456
Query: 167 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA 226
+ + + + N+++ YA GD+ A+ F+ +DV +W +++ Y +G +
Sbjct: 457 IVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRIS 516
Query: 227 RTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMIT 277
F +M N+ ++ +++A S +D E FE+M + + M+
Sbjct: 517 VWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLD 576
Query: 278 GYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 337
G+ G+ + A++ + MP F+ R SL ++
Sbjct: 577 LIGRTGNFSAAKRFLEEMP--------------------------FVPTARIWGSLLNAS 610
Query: 338 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE 397
+ T A+ AA ++ K H TGC+V LL MY + G + N + +E
Sbjct: 611 RNHKDITIAEFAAEQIFKMEHDN-------TGCYV--LLLNMYAEAGRWEDVNRIKLLME 661
Query: 398 EKDV 401
K +
Sbjct: 662 SKGI 665
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/474 (42%), Positives = 288/474 (60%), Gaps = 18/474 (3%)
Query: 243 AMVAGYVQSNKMDMAREL---FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRD 299
+ VA Y + N+ +AR L F ++ S V + N +I + G+ A+K+ ++
Sbjct: 70 STVAAYRRCNRSYLARRLLLWFLSL-SPGVCNINLIIESLMKIGESGLAKKVLRNASDQN 128
Query: 300 CVSWAAIISGYAQTGHYEEAL----NM--FIEIKRDGESLNRSTFSCALSTCADIAALEL 353
++W +I GY + YEEAL NM F +IK N+ +F+ +L+ CA + L
Sbjct: 129 VITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP-----NKFSFASSLAACARLGDLHH 183
Query: 354 GKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYAR 413
K +H ++ +G E + +AL+ +Y KCG IG + +VF ++ DV WN MI G+A
Sbjct: 184 AKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFAT 243
Query: 414 HGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSK 473
HG +A+ VF M+ V PD IT +G+L+ CSH GL++ G EYF M++ +S+ P +
Sbjct: 244 HGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLE 303
Query: 474 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 533
HY M+DLLGRAGR++EA +L+ +MP EP W +LL +SR + N ELGE A + + K
Sbjct: 304 HYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKA 363
Query: 534 EPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCF 593
+ SG YVLLSN+Y+++ +W A +R M G++K G SW+E IH+F GD
Sbjct: 364 K---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTS 420
Query: 594 HPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIP 653
H E IY LE L K + +G+VS T LVL DV EEEKE L YHSEKLA+A+ IL
Sbjct: 421 HIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSS 480
Query: 654 AGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
G IR+ KN+R+C DCHN IK +SK++ R+II+RD RFH F +G+CSC DYW
Sbjct: 481 PGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 15/247 (6%)
Query: 176 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA-------RT 228
V + N +I + G+ AK + + Q+V TW M+ GYV+N +EA +
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 229 FFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGD 284
F D P N+ S+ + +A + + A+ + M N + ++ Y + GD
Sbjct: 158 FTDIKP--NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGD 215
Query: 285 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 344
I +R++F + + D W A+I+G+A G EA+ +F E++ + S + TF L+T
Sbjct: 216 IGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTT 275
Query: 345 CADIAALELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVV 402
C+ LE GK+ G + + + A++ + + G + EA ++ E + E DVV
Sbjct: 276 CSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVV 335
Query: 403 SWNTMIA 409
W ++++
Sbjct: 336 IWRSLLS 342
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 31/276 (11%)
Query: 59 LTGYVRNRRLGDARRL---FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
+ Y R R ARRL F S+ V + N ++ + G + A++V +N I
Sbjct: 72 VAAYRRCNRSYLARRLLLWFLSL-SPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVI 130
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 175
+WN ++ YV N + EEA + + + I N F L A +L D H +
Sbjct: 131 TWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPN----KFSFASSLAACARLGDLHHAKW 186
Query: 176 V--------VSWNTMISG-----YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGM 222
V + N ++S YA+ GD+ ++ +F DV W AM++G+ +G+
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 223 LDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWN 273
EA F +M + + I++ ++ ++ +E F M R + +
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 274 TMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIIS 308
M+ G+ G + +A +L + MP + D V W +++S
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 46/270 (17%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM------ 78
N +I ++ LA+ + +++++WN+M+ GYVRN + +A + +M
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 79 -PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEA 133
P K S+ + L+ A+ G A+ V M NAI + L+ Y G I +
Sbjct: 162 KPNK--FSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 134 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 193
+F S ++ WN ++ GF + A ++F +M V
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHV----------------- 262
Query: 194 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGY 248
SP D T+ +++ G+L+E + +F M ++ I Y AMV
Sbjct: 263 --------SP--DSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLL 312
Query: 249 VQSNKMDMARELFEAMP-SRNVSSWNTMIT 277
++ ++ A EL E+MP +V W ++++
Sbjct: 313 GRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 113/288 (39%), Gaps = 19/288 (6%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWN--VM 58
M+ G A +V ++ +++N MI GY+RN ++ A M + N
Sbjct: 109 MKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSF 168
Query: 59 LTGYVRNRRLGDARR-------LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
+ RLGD + DS + + + +A++ YA+ G +REVFY +
Sbjct: 169 ASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKR 228
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKL 167
+ WN ++ + +G EA R+F + I++ L+ +L ++
Sbjct: 229 NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEY 288
Query: 168 FDKMHVRDVVS-----WNTMISGYAQDGDMSQAKNLFDQSPHQ-DVFTWTAMVSGYVQNG 221
F M R + + M+ + G + +A L + P + DV W +++S
Sbjct: 289 FGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYK 348
Query: 222 MLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 269
+ + + Y + Y + K + A+++ E M +
Sbjct: 349 NPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/641 (33%), Positives = 330/641 (51%), Gaps = 92/641 (14%)
Query: 149 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD------QS 202
NC++ + + + L A KLFD+M + VS TMIS YA+ G + +A LF
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 203 PHQDVFTW---------------------------------TAMVSGYVQNGMLDEARTF 229
P ++T T +V+ YV+ G L A+
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 230 FDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNT--------------- 274
FDQM K ++ ++ GY Q+ + A +LF + + V W++
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVE-WDSFVFSVVLKACASLEE 300
Query: 275 -------------------------MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG 309
++ Y + A + F + + + VSW+AIISG
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 310 YAQTGHYEEALNMFIEIK-RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET 368
Y Q +EEA+ F ++ ++ LN T++ C+ +A +G Q+H +K
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 369 GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK 428
+ +AL+ MY KCG + +AN+VFE ++ D+V+W I+G+A +G +AL +FE M
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 429 TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 488
+ G+KP+ +T + VL+ACSHAGL+++G +M + Y+V P+ HY CMID+ R+G L
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 489 EEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLY 548
+EA M+NMPFEP A SW L H N ELGE A E + +++P ++ YVL NLY
Sbjct: 541 DEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLY 600
Query: 549 AASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELD 608
+G+W +A M M + ++K SW++ + KIH+F VGD HP+ IY L+E D
Sbjct: 601 TWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD 660
Query: 609 LKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTI--PAGRPIRVIKNLRV 666
M EG + + E +E +L HSE+LA+AFG++++ A PI+V KNLR
Sbjct: 661 GFM--EGDMFQCNMT------ERREQLLD-HSERLAIAFGLISVHGNAPAPIKVFKNLRA 711
Query: 667 CEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
C DCH KH+S + G I++RDS RFHHF EG CSC DYW
Sbjct: 712 CPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 143/319 (44%), Gaps = 59/319 (18%)
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLL 121
Y++ A R F + + + VSW+A++SGY Q +EA + F + KNA +L
Sbjct: 330 YIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA----SIL 385
Query: 122 AAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV-----KRKMLGA------------- 163
++ + I +AC + +C +GG V KR ++G+
Sbjct: 386 NSFTYTS-IFQACSVLA----------DCNIGGQVHADAIKRSLIGSQYGESALITMYSK 434
Query: 164 ------ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAM 213
A ++F+ M D+V+W ISG+A G+ S+A LF++ + T+ A+
Sbjct: 435 CGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAV 494
Query: 214 VSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMP-SR 267
++ G++++ + D M +K ++ Y+ M+ Y +S +D A + + MP
Sbjct: 495 LTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEP 554
Query: 268 NVSSWNTMITGYGQN-----GDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 322
+ SW ++G + G+IA +L + P+ D + + Y G +EEA M
Sbjct: 555 DAMSWKCFLSGCWTHKNLELGEIA-GEELRQLDPE-DTAGYVLPFNLYTWAGKWEEAAEM 612
Query: 323 FIEIKRDGESLNRSTFSCA 341
+K E + + SC+
Sbjct: 613 ---MKLMNERMLKKELSCS 628
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 173/429 (40%), Gaps = 73/429 (17%)
Query: 2 RNGHCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNV 57
G D A+ +F+ M + S Y ++ + R + + + L S
Sbjct: 161 EQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTS 220
Query: 58 MLTG----YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN 113
+ TG YV+ L A+R+FD M K V+ ++ GY Q G A +A ++F +
Sbjct: 221 IETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV-TE 279
Query: 114 AISWNGLLAAYVHN----------GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGA 163
+ W+ + + V G+ AC + + E+ L+ ++K +
Sbjct: 280 GVEWDSFVFSVVLKACASLEELNLGKQIHAC-VAKLGLESEVSVGTPLVDFYIKCSSFES 338
Query: 164 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV-----FTWT------- 211
A + F ++ + VSW+ +ISGY Q +A F ++ FT+T
Sbjct: 339 ACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS 398
Query: 212 ----------------------------AMVSGYVQNGMLDEARTFFDQMPQKNEISYNA 243
A+++ Y + G LD+A F+ M + +++ A
Sbjct: 399 VLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTA 458
Query: 244 MVAGYVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRD 299
++G+ A LFE M S N ++ ++T G + Q + D M ++
Sbjct: 459 FISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKY 518
Query: 300 CVS-----WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 354
V+ + +I YA++G +EAL + + +++ ++ C LS C LELG
Sbjct: 519 NVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAM---SWKCFLSGCWTHKNLELG 575
Query: 355 KQIHGQVVK 363
+I G+ ++
Sbjct: 576 -EIAGEELR 583
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Query: 318 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 377
EA E+ + G S++ ++ C C ++ +L G+ +H ++ + N +L
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
MY +C S+ +A+ +F+ + E + VS TMI+ YA G +A+ +F M G KP
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
+L + + +D G + + + + +S T ++++ + G L A+ +
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIE-TGIVNMYVKCGWLVGAKRVFDQ 244
Query: 498 MPFEPPAASWGALLGASR 515
M + P A G ++G ++
Sbjct: 245 MAVKKPVACTGLMVGYTQ 262
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/437 (41%), Positives = 277/437 (63%), Gaps = 5/437 (1%)
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
++T Y + GD+ AR++FD MP++ V+W +++SG+ Q G +EA+ +F +++ G +
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
+TF LS CA A+ LG +H ++ G + +G AL+ +Y +CG +G+A +VF+
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 395 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT-IGVKPDEITMVGVLSACSHAGLID 453
++E +V +W MI+ Y HG+G+QA+ +F M+ G P+ +T V VLSAC+HAGL++
Sbjct: 268 KMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVE 327
Query: 454 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPA---ASWGAL 510
G + M K Y + P +H+ CM+D+LGRAG L+EA + + A A W A+
Sbjct: 328 EGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAM 387
Query: 511 LGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
LGA ++H N +LG + A+ + +EP N G +V+LSN+YA SG+ + ++R M ++
Sbjct: 388 LGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLR 447
Query: 571 KVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEE 630
K GYS +EV+NK + F++GD H E IY +LE L + + GY ++ V+H VEEE
Sbjct: 448 KQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEE 507
Query: 631 EKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDS 690
EKE L+YHSEKLAVAFG+L I ++KNLR+CEDCH+A K+IS + R I +RD
Sbjct: 508 EKEFALRYHSEKLAVAFGLLK-TVDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRDK 566
Query: 691 HRFHHFNEGICSCGDYW 707
RFHHF G CSC DYW
Sbjct: 567 LRFHHFQNGSCSCLDYW 583
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 155/319 (48%), Gaps = 18/319 (5%)
Query: 237 NEISYNAMV-AGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 295
N +Y A+V AG + L R+ S +IT IA LF +
Sbjct: 8 NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSV 67
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
P D + ++I ++ + + + S + TF+ + +CAD++AL +GK
Sbjct: 68 PLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGK 127
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 415
+H V +G+ +V AL+ Y KCG + A VF+ + EK +V+WN++++G+ ++G
Sbjct: 128 GVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNG 187
Query: 416 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT---EYFYSMNKDYSVTPSS 472
+A+ VF M+ G +PD T V +LSAC+ G + G+ +Y S D +V
Sbjct: 188 LADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNV---- 243
Query: 473 KHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFK 532
K T +I+L R G + +A+++ M E A+W A++ A HG G++A E+ K
Sbjct: 244 KLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHG---YGQQAVELFNK 299
Query: 533 ME------PHNSGMYVLLS 545
ME P+N +LS
Sbjct: 300 MEDDCGPIPNNVTFVAVLS 318
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 108/199 (54%), Gaps = 9/199 (4%)
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
D +++ Y++ GDM A+ +FD+ P + + W ++VSG+ QNG+ DEA F QM
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 235 QK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIA 286
+ + ++ ++++ Q+ + + + + + S NV +I Y + GD+
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD-GESLNRSTFSCALSTC 345
+AR++FD M + + +W A+IS Y G+ ++A+ +F +++ D G N TF LS C
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 346 ADIAALELGKQIHGQVVKT 364
A +E G+ ++ ++ K+
Sbjct: 321 AHAGLVEEGRSVYKRMTKS 339
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----N 113
++T Y + + AR++FD MP+K +V+WN+++SG+ QNG ADEA +VFYQM +
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 114 AISWNGLLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 169
+ ++ LL+A G + + D + L+ + + +G AR++FD
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 170 KMHVRDVVSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLD 224
KM +V +W MIS Y G QA LF D P + T+ A++S G+++
Sbjct: 268 KMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVE 327
Query: 225 EARTFFDQMPQ 235
E R+ + +M +
Sbjct: 328 EGRSVYKRMTK 338
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 34/240 (14%)
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF---- 137
D A+++ Y++ G + AR+VF +MP K+ ++WN L++ + NG +EA ++F
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 138 ------DSKSDWELISWNCL------MGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 185
DS + L+S C +G +V + ++ L K+ +I+
Sbjct: 201 ESGFEPDSATFVSLLS-ACAQTGAVSLGSWVHQYIISEGLDLNVKL-------GTALINL 252
Query: 186 YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM-----PQKNEIS 240
Y++ GD+ +A+ +FD+ +V WTAM+S Y +G +A F++M P N ++
Sbjct: 253 YSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVT 312
Query: 241 YNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMM 295
+ A+++ + ++ R +++ M V M+ G+ G + +A K +
Sbjct: 313 FVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQL 372
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 44/175 (25%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----------- 50
+ G + A +VF+ MP +S V++N+++SG+ +N A +F +M +
Sbjct: 154 KCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVS 213
Query: 51 -----------DLVSW-----------------NVMLTGYVRNRRLGDARRLFDSMPQKD 82
L SW ++ Y R +G AR +FD M + +
Sbjct: 214 LLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETN 273
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQM-----PHKNAISWNGLLAAYVHNGRIEE 132
V +W AM+S Y +GY +A E+F +M P N +++ +L+A H G +EE
Sbjct: 274 VAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEE 328
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/538 (35%), Positives = 311/538 (57%), Gaps = 12/538 (2%)
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDVFT---WTAMVSGYVQNGMLDEARTFFDQM----P 234
+I+ ++ + A+ +FD + T W AM GY +NG +A + M
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 235 QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARK 290
+ S + + V + + R + + R + +N ++ Y ++G ARK
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 291 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 350
+FD M +R+ V+W ++IS ++ E N+F +++ + + +T + L C+ +AA
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA 352
Query: 351 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 410
L GK+IH Q++K+ + + N+L+ MY KCG + + VF+ + KD+ SWN M+
Sbjct: 353 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412
Query: 411 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 470
YA +G ++ + +FE M GV PD IT V +LS CS GL + G F M ++ V+P
Sbjct: 413 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472
Query: 471 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 530
+ +HY C++D+LGRAG+++EA ++ MPF+P A+ WG+LL + R+HGN +GE AA+ +
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 532
Query: 531 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 590
F +EPHN G YV++SN+YA + W + +R M+ GV+K G SWV+V++KI F G
Sbjct: 533 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Query: 591 DCFH-PEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGI 649
+ D EL + + GY +T +VLHDV+EE K + + HSE+LA + +
Sbjct: 593 GGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSL 652
Query: 650 LTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+ G PIR+ KNLRVC DCH+ +K +S++ R+I+LRD+ RFHHF +GICSC DYW
Sbjct: 653 IHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 177/373 (47%), Gaps = 40/373 (10%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVS---WNAMLSGYAQNGYADEAREVFYQM----- 109
++T + RRL AR++FD + +++ W AM GY++NG +A V+ M
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 110 -PHKNAISWNGLLAAYVHNGRIEEA--CRLFDSKSDWELISWNCLMGGFVKRKMLGAARK 166
P +IS + + R+ ++ K + + +N L+ +++ + ARK
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 167 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV-FTWTAMVSGYVQNGMLDE 225
+FD M R+VV+WN++IS ++ + + NLF + + + F+W + +
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTT---------- 342
Query: 226 ARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDI 285
+P + ++ A++ G ++ ++ ++ +V N+++ YG+ G++
Sbjct: 343 ------ILPACSRVA--ALLTG------KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEV 388
Query: 286 AQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTC 345
+R++FD+M +D SW +++ YA G+ EE +N+F + G + + TF LS C
Sbjct: 389 EYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGC 448
Query: 346 ADIAALELGKQIHGQVVKTGYETGCFVGN--ALLGMYFKCGSIGEANDVFEGIEEKDVVS 403
+D E G + + +KT + + + L+ + + G I EA V E + K S
Sbjct: 449 SDTGLTEYGLSLFER-MKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSAS 507
Query: 404 -WNTMIAGYARHG 415
W +++ HG
Sbjct: 508 IWGSLLNSCRLHG 520
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 147/338 (43%), Gaps = 67/338 (19%)
Query: 14 NTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARR 73
N PR + + Y M+ ++ FS++ L + +DL R R G +
Sbjct: 214 NGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDL-----------RVGR-GIHAQ 261
Query: 74 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA 133
+ + D V +N +L Y ++G D+AR+VF M +N ++WN L++ R+ E
Sbjct: 262 IVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEM 321
Query: 134 CRLFDSKSDWELI--SW--------------------------------------NCLMG 153
LF K E+I SW N LM
Sbjct: 322 FNLF-RKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMD 380
Query: 154 GFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFT 209
+ K + +R++FD M +D+ SWN M++ YA +G++ + NLF + D T
Sbjct: 381 MYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGIT 440
Query: 210 WTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAM 264
+ A++SG G+ + + F++M + +S Y +V ++ K+ A ++ E M
Sbjct: 441 FVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETM 500
Query: 265 PSR-NVSSWNTMITGYGQNGDIA----QARKLFDMMPQ 297
P + + S W +++ +G+++ A++LF + P
Sbjct: 501 PFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPH 538
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/440 (40%), Positives = 269/440 (61%), Gaps = 5/440 (1%)
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
T++ Y + A K+FD +P+RD VSW + S Y + + L +F ++K D +
Sbjct: 152 TTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDG 211
Query: 333 LNRS---TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 389
+ T AL CA++ AL+ GKQ+H + + G + N L+ MY +CGS+ +A
Sbjct: 212 CVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKA 271
Query: 390 NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 449
VF G+ E++VVSW +I+G A +GFGK+A+ F M G+ P+E T+ G+LSACSH+
Sbjct: 272 YQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHS 331
Query: 450 GLIDRGTEYFYSMNK-DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 508
GL+ G +F M ++ + P+ HY C++DLLGRA L++A L+++M +P + W
Sbjct: 332 GLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWR 391
Query: 509 ALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVG 568
LLGA R+HG+ ELGE+ + +++ +G YVLL N Y+ G+W +RS M++
Sbjct: 392 TLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKR 451
Query: 569 VQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVE 628
+ G S +E+Q +H+F V D HP K+ IY L E++ +++ GYV+ LH++E
Sbjct: 452 IHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLE 511
Query: 629 -EEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIIL 687
EEEK + L+YHSEKLA+AFGIL P G IRV KNLR C DCHN K +S + R++I+
Sbjct: 512 SEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIV 571
Query: 688 RDSHRFHHFNEGICSCGDYW 707
RD RFHHF G CSC D+W
Sbjct: 572 RDRSRFHHFKGGSCSCNDFW 591
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 9/267 (3%)
Query: 305 AIISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHGQVVK 363
+I ++ + E +F ++R+ N + S AL C L G QIHG++
Sbjct: 82 TMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFS 141
Query: 364 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMV 423
G+ + + L+ +Y C + +A VF+ I ++D VSWN + + Y R+ + L++
Sbjct: 142 DGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVL 201
Query: 424 FESMKTI---GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 480
F+ MK VKPD +T + L AC++ G +D G + ++++ ++ + ++
Sbjct: 202 FDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN-GLSGALNLSNTLVS 260
Query: 481 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG-NTELGEKAAEMV-FKMEPHNS 538
+ R G +++A + M E SW AL+ ++G E E EM+ F + P
Sbjct: 261 MYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ 319
Query: 539 GMYVLLSNLYAASGRWADAGNMRSRMR 565
+ LLS + SG A+ RMR
Sbjct: 320 TLTGLLSAC-SHSGLVAEGMMFFDRMR 345
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 148/341 (43%), Gaps = 37/341 (10%)
Query: 105 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKR------ 158
VF Q + N ++ A+ + E RLF S + N L F +
Sbjct: 68 VFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSG 127
Query: 159 KMLGAAR---KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 215
+LG + K+F + D + T++ Y+ + + A +FD+ P +D +W + S
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFS 187
Query: 216 GYVQNGMLDEARTFFDQMPQKNEIS-------YNAMVAGYVQSN--KMDMARELFEAMPS 266
Y++N + FD+M KN++ ++A +N +D +++ + +
Sbjct: 188 CYLRNKRTRDVLVLFDKM--KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDE 245
Query: 267 RNVSSW----NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 322
+S NT+++ Y + G + +A ++F M +R+ VSW A+ISG A G +EA+
Sbjct: 246 NGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEA 305
Query: 323 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET-------GCFVGNA 375
F E+ + G S T + LS C+ + G ++ ++ GC V
Sbjct: 306 FNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVD-- 363
Query: 376 LLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHG 415
LLG + + +A + + +E K D W T++ HG
Sbjct: 364 LLG---RARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 57/239 (23%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ------------------- 49
A +VF+ +P+R +VS+N + S YLRN R LFDKM
Sbjct: 167 ACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQA 226
Query: 50 -------------RDLVS----------WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSW 86
D + N +++ Y R + A ++F M +++VVSW
Sbjct: 227 CANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSW 286
Query: 87 NAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLAAYVHNGRIEEACRLFDSK 140
A++SG A NG+ EA E F +M P + ++ GLL+A H+G + E FD
Sbjct: 287 TALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT--GLLSACSHSGLVAEGMMFFDRM 344
Query: 141 SDWE------LISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDM 192
E L + C++ + ++L A L M ++ D W T++ GD+
Sbjct: 345 RSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDV 403
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 135/305 (44%), Gaps = 50/305 (16%)
Query: 40 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP-------QKDVVSWNAMLSG 92
A +FD++P+RD VSWNV+ + Y+RN+R D LFD M + D V+ L
Sbjct: 167 ACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQA 226
Query: 93 YAQNGYADEAREVFYQMPHKNAISW-----NGLLAAYVHNGRIEEACRLFDSKSDWELIS 147
A G D ++V + +N +S N L++ Y G +++A ++F + ++S
Sbjct: 227 CANLGALDFGKQV-HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVS 285
Query: 148 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 207
W L+ G M G ++ + ++N M+ F SP +
Sbjct: 286 WTALISGLA---MNGFGKEAIE--------AFNEMLK--------------FGISPEEQ- 319
Query: 208 FTWTAMVSGYVQNGMLDEARTFFDQMP------QKNEISYNAMVAGYVQSNKMDMARELF 261
T T ++S +G++ E FFD+M + N Y +V ++ +D A L
Sbjct: 320 -TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLI 378
Query: 262 EAMPSRNVSS-WNTMITGYGQNGDIAQARKLFDMMPQ---RDCVSWAAIISGYAQTGHYE 317
++M + S+ W T++ +GD+ ++ + + + + +++ Y+ G +E
Sbjct: 379 KSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWE 438
Query: 318 EALNM 322
+ +
Sbjct: 439 KVTEL 443
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/680 (31%), Positives = 352/680 (51%), Gaps = 69/680 (10%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
+++I YL + + LFD++ Q+D V WNVML GY + L + F M + D +
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM-RMDQI 235
Query: 85 SWNA----------------------------------------MLSGYAQNGYADEARE 104
S NA +LS Y++ G D+A +
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 105 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 164
+F M + ++WN +++ YV +G +EE+ F +E+IS L +L +
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFF-----YEMISSGVLPDAITFSSLLPSV 350
Query: 165 RKLFDKMHVR-------------DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT 211
K + + + D+ + +I Y + +S A+N+F Q DV +T
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 212 AMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSR 267
AM+SGY+ NG+ ++ F + + NEI+ +++ + + REL + +
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 268 NVSSWNTM----ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 323
+ + I Y + G + A ++F+ + +RD VSW ++I+ AQ+ + A+++F
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 324 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 383
++ G + + S ALS CA++ + GK IHG ++K + + + L+ MY KC
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590
Query: 384 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGV 442
G++ A +VF+ ++EK++VSWN++IA HG K +L +F M + G++PD+IT + +
Sbjct: 591 GNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 650
Query: 443 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 502
+S+C H G +D G +F SM +DY + P +HY C++DL GRAGRL EA + +++MPF P
Sbjct: 651 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 710
Query: 503 PAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRS 562
A WG LLGA R+H N EL E A+ + ++P NSG YVL+SN +A + W +RS
Sbjct: 711 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 770
Query: 563 RMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKL 622
M++ VQK+ GYSW+E+ + H F GD HPE IY+ L L ++R EGY+ L
Sbjct: 771 LMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYL 830
Query: 623 VLHDVEEEEKEHMLKYHSEK 642
LH E K + + EK
Sbjct: 831 PLHP-ESSRKVYPVSRFIEK 849
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 232/522 (44%), Gaps = 88/522 (16%)
Query: 86 WNAMLSGYAQNGYADEAREVFYQM------PHK--------------------------- 112
WN+++S + +NG ++A +++M P
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 113 ------NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARK 166
N + L+ AY+ G+I+ +LFD + + WN ++ G+ K L + K
Sbjct: 166 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 225
Query: 167 LFD-------------------------------KMHVRDVVSW--------NTMISGYA 187
F ++H VVS N+++S Y+
Sbjct: 226 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 285
Query: 188 QDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNA 243
+ G A LF D TW M+SGYVQ+G+++E+ TFF +M + I++++
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 244 MVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRD 299
++ + ++ +++ + ++S + +I Y + ++ A+ +F D
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 405
Query: 300 CVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHG 359
V + A+ISGY G Y ++L MF + + S N T L + AL+LG+++HG
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 360 QVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQ 419
++K G++ C +G A++ MY KCG + A ++FE + ++D+VSWN+MI A+
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSA 525
Query: 420 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 479
A+ +F M G+ D +++ LSAC++ G M K +S+ + +I
Sbjct: 526 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLI 584
Query: 480 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 521
D+ + G L+ A ++ + M E SW +++ A HG +
Sbjct: 585 DMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLK 625
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 138/272 (50%), Gaps = 10/272 (3%)
Query: 186 YAQDGDMSQAKNLFDQSP--HQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEI 239
YA G S +F + + W +++S +V+NG+L++A F+ +M +
Sbjct: 80 YAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS 139
Query: 240 SYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMM 295
++ +V V L + + S N +++I Y + G I KLFD +
Sbjct: 140 TFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV 199
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
Q+DCV W +++GYA+ G + + F ++ D S N TF C LS CA ++LG
Sbjct: 200 LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 415
Q+HG VV +G + + N+LL MY KCG +A+ +F + D V+WN MI+GY + G
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 416 FGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
+++L F M + GV PD IT +L + S
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 9/264 (3%)
Query: 279 YGQNGDIAQARKLFDMMPQR--DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRS 336
Y G + K+F + R W +IIS + + G +AL + ++ G S + S
Sbjct: 80 YAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS 139
Query: 337 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 396
TF C + C + + + V G + FV ++L+ Y + G I + +F+ +
Sbjct: 140 TFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV 199
Query: 397 EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 456
+KD V WN M+ GYA+ G + F M+ + P+ +T VLS C+ LID G
Sbjct: 200 LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 457 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 516
+ + + V ++ + + GR ++A L R M +W + I
Sbjct: 260 Q-LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCM-----I 312
Query: 517 HGNTELGEKAAEMVFKMEPHNSGM 540
G + G + F E +SG+
Sbjct: 313 SGYVQSGLMEESLTFFYEMISSGV 336
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 163/397 (41%), Gaps = 78/397 (19%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ------------ 49
+ G D A ++F M R +V++N MISGY+++ + F +M
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 50 ----------------------RDLVSWNVMLT-----GYVRNRRLGDARRLFDSMPQKD 82
R +S ++ LT Y + R + A+ +F D
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 405
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN-----------GLLAAY-----VH 126
VV + AM+SGY NG ++ E+F + K IS N G+L A +H
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLV-KVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 127 NGRIEEACRLFDSKSDWELISWNC-LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 185
I++ FD++ + C ++ + K + A ++F+++ RD+VSWN+MI+
Sbjct: 465 GFIIKKG---FDNRCN-----IGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 186 YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF--------FDQMPQKN 237
AQ + S A ++F Q + +S + + +F +
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD 576
Query: 238 EISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ 297
S + ++ Y + + A +F+ M +N+ SWN++I G +G + + LF M +
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Query: 298 R-----DCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
+ D +++ IIS G +E + F + D
Sbjct: 637 KSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTED 673
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 338 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE 397
S L C++ L GKQ+H ++ + +LGMY CGS + +F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 398 EK--DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
+ + WN++I+ + R+G QAL + M GV PD T ++ AC
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/554 (34%), Positives = 316/554 (57%), Gaps = 21/554 (3%)
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
D + N ++ Y + +++ A+ LFD+ +V +WT+++SGY G A + F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 235 Q-----KNEISYNAMVAGYVQSNKMDMARELFEAMP----SRNVSSWNTMITGYGQNGDI 285
+ NE ++ ++ + + + + + RN+ ++++ YG+ D+
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 286 AQARKLFDMMPQ--RDCVSWAAIISGYAQTGHYEEALNMF--IEIKRDGESLNRSTFSCA 341
AR++FD M R+ VSW ++I+ YAQ EA+ +F + N+ +
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
+S C+ + L+ GK HG V + GYE+ V +LL MY KCGS+ A +F I V
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 402 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYS 461
+S+ +MI A+HG G+ A+ +F+ M + P+ +T++GVL ACSH+GL++ G EY
Sbjct: 303 ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 362
Query: 462 MNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF--EPPAASWGALLGASRIHGN 519
M + Y V P S+HYTC++D+LGR GR++EA +L + + E A WGALL A R+HG
Sbjct: 363 MAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR 422
Query: 520 TELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 579
E+ +A++ + + + Y+ LSN YA SG W D+ ++R M+ G K SW+E
Sbjct: 423 VEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIE 482
Query: 580 VQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGY------VSSTKLVLHDVEEEEKE 633
++ ++ F GD E I FL++L+ +M+ G+ ++++ V DV+EE K+
Sbjct: 483 NKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKD 542
Query: 634 HMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRF 693
M+ H E+LA+A+G+L +PAG IR++ NLR+C DCH A K IS+IV R I++RD +RF
Sbjct: 543 EMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRF 602
Query: 694 HHFNEGICSCGDYW 707
H F G C+C DYW
Sbjct: 603 HCFKNGSCTCRDYW 616
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 154/353 (43%), Gaps = 27/353 (7%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
D + N ++ YV+ + + AR+LFD M + +VVSW +++SGY G A +F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 111 HKNAISWNGLLAAYVHNG-------RIEEA--CRLFDSKSDWELISWNCLMGGFVKRKML 161
+ N A V RI + RL S ++ + L+ + K +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 162 GAARKLFDKM--HVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------SPHQDVFTWTAM 213
AR++FD M + R+VVSW +MI+ YAQ+ +A LF S + F ++
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 214 VSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 269
+S G L + + + N + +++ Y + + A ++F + +V
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 270 SSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEALN-MFI 324
S+ +MI ++G A KLFD M + V+ ++ + +G E L + +
Sbjct: 303 ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 362
Query: 325 EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 377
++ G + ++C + ++ ++ + ++ G E G + ALL
Sbjct: 363 MAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYEL-AKTIEVGAEQGALLWGALL 414
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 38/336 (11%)
Query: 18 RRSSVSYNAMISGYLRNARFSLARDLFDKMPQ--RDLVSWNVMLTGYVRNRRLGDARRLF 75
RR+ V ++++ Y + AR +FD M R++VSW M+T Y +N R +A LF
Sbjct: 163 RRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF 222
Query: 76 DSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACR 135
S+NA L+ N + + V + W + V G E
Sbjct: 223 R--------SFNAALTSDRANQFMLAS--VISACSSLGRLQWGKVAHGLVTRGGYESNTV 272
Query: 136 LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
+ S L+ + K L A K+F ++ V+S+ +MI A+ G A
Sbjct: 273 VATS-----------LLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAA 321
Query: 196 KNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI-----SYNAMVA 246
LFD+ + + T ++ +G+++E + M +K + Y +V
Sbjct: 322 VKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVD 381
Query: 247 GYVQSNKMDMAREL---FEAMPSRNVSSWNTMITG---YGQNGDIAQARKLFDMMPQRDC 300
+ ++D A EL E + W +++ +G+ +++A K Q+
Sbjct: 382 MLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVT 441
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRS 336
++ A+ + YA +G +E++ ++ +E+KR G R+
Sbjct: 442 SAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERA 477
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 309 GYAQTGHYEEALNMFI-EIKRDGESLNRSTFSC-ALSTCADIAALELGKQIHGQVVKTGY 366
G+ Q H A ++F+ + K D L F LS + A L +H +K G+
Sbjct: 4 GFIQNVHLAPATSLFVPQYKNDFFHLKTKAFLVHKLSESTNAAFTNL---LHTLTLKLGF 60
Query: 367 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 426
+ F N L+ Y K I A +F+ + E +VVSW ++I+GY G + AL +F+
Sbjct: 61 ASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQK 120
Query: 427 M-KTIGVKPDEITMVGVLSACS-----------HAGLIDRGTEYFYSMNKDYSVTPSSKH 474
M + V P+E T V ACS HA L G + ++ V+ S
Sbjct: 121 MHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISG------LRRNIVVSSS--- 171
Query: 475 YTCMIDLLGRAGRLEEAQDLMRNM-PFEPPAASWGALLGASRIHGNTELGEKAAEM 529
++D+ G+ +E A+ + +M + SW +++ A + G +A E+
Sbjct: 172 ---LVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITA---YAQNARGHEAIEL 221
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/579 (36%), Positives = 310/579 (53%), Gaps = 53/579 (9%)
Query: 180 NTMISGYAQDGDMSQAKNLFDQSP--HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN 237
N + YA G+M A+ LFD+ P +D WT ++S + + G+L + F +M +K
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 238 -EISYNAMVA-----------GYVQSNK------------------MDM---------AR 258
EI ++V G+ Q MDM +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 259 ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 318
+FE + ++V SW ++ + + + R++F MP+R+ V+W +++GY G E
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 319 ALNMFIE-IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETG-------C 370
L + E + R G LN T LS CA L +G+ +H +K G
Sbjct: 227 VLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDV 286
Query: 371 FVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 430
VG AL+ MY KCG+I + +VF + +++VV+WN + +G A HG G+ + +F M
Sbjct: 287 MVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR- 345
Query: 431 GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEE 490
VKPD++T VLSACSH+G++D G F+S+ + Y + P HY CM+DLLGRAG +EE
Sbjct: 346 EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEE 404
Query: 491 AQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAA 550
A+ LMR MP P G+LLG+ +HG E+ E+ + +M P N+ +L+SN+Y A
Sbjct: 405 AEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVA 464
Query: 551 SGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLK 610
GR A +R +R G++K+ G S + V + +H+F+ GD HP IY L E+ +
Sbjct: 465 EGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIER 524
Query: 611 MRREGYVSSTK-LVLH-DVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCE 668
+R GYV LV H + + EEKE L HSEKLAV FG+L P+ V KNLR+C
Sbjct: 525 IRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICR 584
Query: 669 DCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
DCH+A+K +SK+ R II+RD +RFH F G CSC DYW
Sbjct: 585 DCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
NA++ Y + S + +F+++ ++ +VSW V+L V+ L R +F MP+++ V
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFDS 139
+W M++GY G+ E E+ +M + N ++ +L+A +G
Sbjct: 210 AWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG----------- 258
Query: 140 KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 199
N ++G +V L + ++ DV+ ++ YA+ G++ + N+F
Sbjct: 259 ---------NLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 200 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ------KNEISYNAMVAGYVQSNK 253
++V TW A+ SG +G + R D PQ +++++ A+++ S
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHG---KGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGI 366
Query: 254 MDMARELFEAMP----SRNVSSWNTMITGYGQNGDIAQARKLFDMMP 296
+D F ++ V + M+ G+ G I +A L MP
Sbjct: 367 VDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP 413
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 133/305 (43%), Gaps = 41/305 (13%)
Query: 11 RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGD 70
R+F + +S VS+ ++ ++ R++F +MP+R+ V+W VM+ GY+ +
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 71 ARRLFDSMPQK-----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYV 125
L M + + V+ +MLS AQ+G N ++ +V
Sbjct: 227 VLELLAEMVFRCGHGLNFVTLCSMLSACAQSG--------------------NLVVGRWV 266
Query: 126 HNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 185
H +++ + + S +++ L+ + K + ++ +F M R+VV+WN + SG
Sbjct: 267 HVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSG 326
Query: 186 YAQDGDMSQAKNLFDQSPHQ---DVFTWTAMVSGYVQNGMLDE------ARTFFDQMPQK 236
A G ++F Q + D T+TA++S +G++DE + F+ P+
Sbjct: 327 LAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKV 386
Query: 237 NEISYNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGDIAQA----RKL 291
+ Y MV ++ ++ A L MP N +++ +G + A R+L
Sbjct: 387 DH--YACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKREL 444
Query: 292 FDMMP 296
M P
Sbjct: 445 IQMSP 449
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 11/216 (5%)
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETG--CFVGNALLGMYFKCGSIGEANDVFEGI--E 397
L CA + L GK++H + +G + ++ NAL Y G + A +F+ I
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 398 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG-T 456
EKD V W T+++ ++R+G ++ +F M+ V+ D++++V + C A L D G
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVC--AKLEDLGFA 130
Query: 457 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 516
+ + + V S K ++D+ G+ G + E + + + E SW +L
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELE-EKSVVSWTVVLDTVV- 188
Query: 517 HGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASG 552
E E+ E+ +M N+ + ++ Y +G
Sbjct: 189 --KWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/540 (38%), Positives = 307/540 (56%), Gaps = 31/540 (5%)
Query: 190 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAM 244
GD+S A +F P W A++ G+ + A +++ M Q++ S +A+
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 245 VAGY--------VQSNKMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLF 292
+ + S+ MD +L + R +S+ T++ Y +NGD+ A KLF
Sbjct: 111 TCSFTLKACARALCSSAMD---QLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 293 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALE 352
D MP RD SW A+I+G EA+ ++ ++ +G + T AL C+
Sbjct: 168 DEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACS-----H 222
Query: 353 LGKQIHGQVVKTGYET-GCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAG 410
LG G+ + GY V NA + MY KCG + +A VFE +K VV+WNTMI G
Sbjct: 223 LGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITG 282
Query: 411 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 470
+A HG +AL +F+ ++ G+KPD+++ + L+AC HAGL++ G F +M V
Sbjct: 283 FAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVER 341
Query: 471 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 530
+ KHY C++DLL RAGRL EA D++ +M P W +LLGAS I+ + E+ E A+ +
Sbjct: 342 NMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREI 401
Query: 531 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 590
+M +N G +VLLSN+YAA GRW D G +R M V+K+ G S++E + IH+F
Sbjct: 402 KEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNS 461
Query: 591 DCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 650
D H + IY ++E+ K+R +GYV+ T LVLHD+ EEEKE+ L YHSEKLAVA+G++
Sbjct: 462 DKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLM 521
Query: 651 TIPAG---RPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+ P+RVI NLR+C DCH KHISKI R II+RD RFH F +G CSC D+W
Sbjct: 522 MMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 112/227 (49%), Gaps = 13/227 (5%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
D + +L Y +N L A +LFD MP +DV SWNA+++G A EA E++ +M
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 111 ----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARK 166
++ ++ L A H G ++E +F S+ +I N + + K + A +
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 167 LFDKMH-VRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNG 221
+F++ + VV+WNTMI+G+A G+ +A +FD+ D ++ A ++ G
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 222 MLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAM 264
+++ + F+ M ++N Y +V ++ ++ A ++ +M
Sbjct: 323 LVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSM 369
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 10/176 (5%)
Query: 6 CDSALRVFNTMPRRSSVSYNAMI-----SGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
C SA+ + R +S ++++ Y +N A LFD+MP RD+ SWN ++
Sbjct: 124 CSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIA 183
Query: 61 GYVRNRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS 116
G V R +A L+ M + + V+ A L + G E +F+ + N I
Sbjct: 184 GLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIV 243
Query: 117 WNGLLAAYVHNGRIEEACRLFDS-KSDWELISWNCLMGGFVKRKMLGAARKLFDKM 171
N + Y G +++A ++F+ +++WN ++ GF A ++FDK+
Sbjct: 244 SNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 299
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
+NG SA ++F+ MP R S+NA+I+G + R S A +L+ +M + V +
Sbjct: 156 KNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVA 215
Query: 62 YV-RNRRLGDARR---LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP-HKNAIS 116
+ LGD + +F +V+ NA + Y++ G+ D+A +VF Q K+ ++
Sbjct: 216 ALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVT 275
Query: 117 WNGLLAAYVHNGRIEEACRLFDSKSD 142
WN ++ + +G A +FD D
Sbjct: 276 WNTMITGFAVHGEAHRALEIFDKLED 301
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 239/772 (30%), Positives = 396/772 (51%), Gaps = 65/772 (8%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWN---- 56
++ G A+ VF ++ + VSY A+ISG+ R A +F +M + LV N
Sbjct: 125 LKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTF 184
Query: 57 -VMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNG--YADEAREVFYQM 109
+LT VR R ++ + + V N+++S Y ++ D+ ++F ++
Sbjct: 185 VAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEI 244
Query: 110 PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE-----LISWNCLMGGFVKRKMLGAA 164
P ++ SWN ++++ V G+ +A LF + E + + L+ +L
Sbjct: 245 PQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRG 304
Query: 165 RKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN 220
R+L + ++++ N +I Y++ DM + ++L++ QD T+T M++ Y+
Sbjct: 305 RELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSF 364
Query: 221 GMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMIT--- 277
GM+D A F + +KN I+YNA++AG+ ++ A +LF M R V + +T
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV 424
Query: 278 ----------------------GYGQNGDI--------------AQARKLFDMMPQRDCV 301
G N I A A ++FD P
Sbjct: 425 DACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDS 484
Query: 302 SWA--AIISGYAQTGHYEEALNMFIEIKRDGES-LNRSTFSCALSTCADIAALELGKQIH 358
S A +II GYA+ G ++A+++F + + L+ + + L+ C + E+G QIH
Sbjct: 485 SKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIH 544
Query: 359 GQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGK 418
+K GY + +GN+L+ MY KC +A +F + E DV+SWN++I+ Y G
Sbjct: 545 CYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGD 604
Query: 419 QALMVFESMKTIGVKPDEITMVGVLSAC--SHAGLIDRGTEYFYSMNKDYSVTPSSKHYT 476
+AL ++ M +KPD IT+ V+SA + + + + F SM Y + P+++HYT
Sbjct: 605 EALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYT 664
Query: 477 CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 536
+ +LG G LEEA+D + +MP +P + ALL + RIH NT + ++ A+++ +P
Sbjct: 665 AFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPE 724
Query: 537 NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPE 596
Y+L SN+Y+ASG W + +R MR+ G +K SW+ +NKIH F D HP+
Sbjct: 725 TPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQ 784
Query: 597 KDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPA-G 655
+ IY LE L ++ + GY +T+ VL +V+E K+ L +HS KLAV +GIL+ G
Sbjct: 785 EKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRG 844
Query: 656 RPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+P+RV+KN+ +C DCH K+IS +V R I+LRDS FHHF G CSC D W
Sbjct: 845 KPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 170/365 (46%), Gaps = 48/365 (13%)
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM-----P 234
N +IS Y + G +A +F V ++TA++SG+ + + EA F +M
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 235 QKNEISYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQNG--DIAQA 288
Q NE ++ A++ V+ ++ + ++ + +V N++++ Y ++
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 289 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR-DGESLNRSTFSCALSTCAD 347
KLFD +PQRD SW ++S + G +A ++F E+ R +G ++ T S LS+C D
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 348 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK------------------------- 382
+ L G+++HG+ ++ G V NAL+G Y K
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 383 ------CGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDE 436
G + A ++F + EK+ +++N ++AG+ R+G G +AL +F M GV+ +
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 437 ITMVGVLSACSHAGLID--RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL 494
++ + AC GL+ + +E + + + T ++D+ R R+ +A+++
Sbjct: 418 FSLTSAVDAC---GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 495 MRNMP 499
P
Sbjct: 475 FDQWP 479
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/577 (20%), Positives = 242/577 (41%), Gaps = 97/577 (16%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM-----P 110
N +++ Y++ +A +F S+ VVS+ A++SG+++ EA +VF++M
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 111 HKNAISWNGLLAAYVHNGRIEEACRL--FDSKSDW--ELISWNCLMGGFVKRK--MLGAA 164
N ++ +L A V R ++ KS + + N LM + K
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 165 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQ 219
KLFD++ RDV SWNT++S ++G +A +LF + D FT + ++S
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 220 NGMLDEAR-----------------------------------TFFDQMPQKNEISYNAM 244
+ +L R + ++ M ++ +++ M
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 245 VAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWA 304
+ Y+ +D A E+F + +N ++N ++ G+ +NG +A KLF M QR
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR------ 411
Query: 305 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 364
G L + + A+ C ++ ++ +QIHG +K
Sbjct: 412 -------------------------GVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKF 446
Query: 365 GYETGCFVGNALLGMYFKCGSIGEANDVFE----GIEEKDVVSWNTMIAGYARHGFGKQA 420
G + ALL M +C + +A ++F+ ++ + ++I GYAR+G +A
Sbjct: 447 GTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATT--SIIGGYARNGLPDKA 504
Query: 421 LMVFE-SMKTIGVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCM 478
+ +F ++ + DE+++ +L+ C G + G + + Y++ Y S + +
Sbjct: 505 VSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGN--SL 562
Query: 479 IDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNS 538
I + + ++A + M E SW +L+ + N G++A + +M
Sbjct: 563 ISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLISCYILQRN---GDEALALWSRMNEKEI 618
Query: 539 GMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGY 575
++ L ++ R+ ++ N S RD+ + T Y
Sbjct: 619 KPDIITLTLVISAFRYTES-NKLSSCRDLFLSMKTIY 654
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 351 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 410
+E+ K +H +K E +GNAL+ Y K G EA VF + VVS+ +I+G
Sbjct: 96 VEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISG 154
Query: 411 YARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTE 457
++R +AL VF M+ G V+P+E T V +L+AC G +
Sbjct: 155 FSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ 202
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 310/541 (57%), Gaps = 14/541 (2%)
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK--- 236
N ++ + + G + A+ LFD+ P ++++++ +++SG+V G EA F M ++
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 237 -NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNT-----MITGYGQNGDIAQARK 290
++ M+ + + ++L V NT +I Y + GDI AR
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVD-NTFVSCGLIDMYSKCGDIEDARC 280
Query: 291 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 350
F+ MP++ V+W +I+GYA G+ EEAL + +++ G S+++ T S + +A
Sbjct: 281 AFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAK 340
Query: 351 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 410
LEL KQ H +++ G+E+ AL+ Y K G + A VF+ + K+++SWN ++ G
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400
Query: 411 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 470
YA HG G A+ +FE M V P+ +T + VLSAC+++GL ++G E F SM++ + + P
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Query: 471 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 530
+ HY CMI+LLGR G L+EA +R P + W ALL A R+ N ELG AE +
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKL 520
Query: 531 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 590
+ M P G YV++ N+Y + G+ A+A + + G+ + +WVEV ++ H F G
Sbjct: 521 YGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSG 580
Query: 591 DCF----HPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 646
D F K +IY ++EL ++ GY + +L DV+E+E+E + +YHSEKLA+A
Sbjct: 581 DRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIA 640
Query: 647 FGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDY 706
+G++ P P+++ +N R+C++CH ++ IS + GR +++RD+ RFHHF EG CSCG Y
Sbjct: 641 YGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGY 700
Query: 707 W 707
W
Sbjct: 701 W 701
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 199/460 (43%), Gaps = 77/460 (16%)
Query: 9 ALRVFNTMPRRSSV-----SYNAMISGYLRNARFSLARDLFDKM------PQRDLVSWNV 57
A +F + R S +Y+A++ +R + ++ M P++ ++ N
Sbjct: 106 AFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM--NR 163
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM-------- 109
+L +V+ + DARRLFD +P++++ S+ +++SG+ G EA E+F M
Sbjct: 164 ILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCE 223
Query: 110 PHKNAI---SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARK 166
H A+ + GL + YV G+ C L D +S L+ + K + AR
Sbjct: 224 THTFAVMLRASAGLGSIYV--GKQLHVCALKLGVVDNTFVSCG-LIDMYSKCGDIEDARC 280
Query: 167 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGM 222
F+ M + V+WN +I+GYA G +A L D D FT + M+ +
Sbjct: 281 AFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAK 340
Query: 223 LDEARTFFDQMPQ---KNEISYN-AMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITG 278
L+ + + + ++EI N A+V Y + ++D AR +F+ +P +N+ SWN ++ G
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400
Query: 279 YGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIE--------- 325
Y +G A KLF+ M + V++ A++S A +G E+ +F+
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Query: 326 ------------------------IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 361
I+R + ++ L+ C LELG+ + ++
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKL 520
Query: 362 VKTGYETGCFVGN--ALLGMYFKCGSIGEANDVFEGIEEK 399
G E +GN + MY G EA V E +E K
Sbjct: 521 YGMGPEK---LGNYVVMYNMYNSMGKTAEAAGVLETLESK 557
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 177/421 (42%), Gaps = 77/421 (18%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWN 56
++ G A R+F+ +P R+ SY ++ISG++ + A +LF M + + ++
Sbjct: 169 VKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFA 228
Query: 57 VMLTG-------------YVRNRRLG----------------------DARRLFDSMPQK 81
VML +V +LG DAR F+ MP+K
Sbjct: 229 VMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEK 288
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEA---- 133
V+WN +++GYA +GY++EA + Y M + + + ++ ++E
Sbjct: 289 TTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAH 348
Query: 134 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 193
L + + E+++ L+ + K + AR +FDK+ ++++SWN ++ GYA G +
Sbjct: 349 ASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGT 408
Query: 194 QAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAM 244
A LF++ +V T+ A++S +G+ ++ F M + + I Y M
Sbjct: 409 DAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACM 468
Query: 245 VAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQAR----KLFDMMPQRD 299
+ + +D A P + V+ W ++ ++ R KL+ M P++
Sbjct: 469 IELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEK- 527
Query: 300 CVSWAAIISGYAQTGHYEEALNMFIEIKRDGES--LNRSTFSCALSTCADIAALELGKQI 357
G+Y NM+ + + E+ + + S LS +E+G Q
Sbjct: 528 -------------LGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQT 574
Query: 358 H 358
H
Sbjct: 575 H 575
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 108/233 (46%), Gaps = 5/233 (2%)
Query: 291 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF--IEIKRDGESLNRSTFSCALSTCADI 348
L D + V+ + I + EA +F +EI R + ST+ + C +
Sbjct: 78 LDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEI-RCSFKVGVSTYDALVEACIRL 136
Query: 349 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 408
++ K+++G ++ G+E ++ N +L M+ KCG I +A +F+ I E+++ S+ ++I
Sbjct: 137 KSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSII 196
Query: 409 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 468
+G+ G +A +F+ M + T +L A + G I G + K V
Sbjct: 197 SGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALK-LGV 255
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 521
++ +ID+ + G +E+A+ MP E +W ++ +HG +E
Sbjct: 256 VDNTFVSCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIAGYALHGYSE 307
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/660 (30%), Positives = 353/660 (53%), Gaps = 57/660 (8%)
Query: 12 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 71
+ N+ + ++ N ++S Y + AR++FD MP+R+LVS+ ++TGY +N + +A
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 72 RRLFDSMPQKDVV----SWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAA 123
RL+ M Q+D+V ++ +++ A + +++ Q+ + I+ N L+A
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAM 212
Query: 124 YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK-----------RKML----------- 161
YV ++ +A R+F +LISW+ ++ GF + ++ML
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 162 -GAARKLFDKMHVRD-----------------VVSWNTMISGYAQDGDMSQAKNLFDQSP 203
G++ K + D ++ ++ YA+ G ++ A+ +FDQ
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 204 HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARE 259
D +W +++G NG DEA + F QM + IS +++ + + +
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392
Query: 260 LFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLF-DMMPQRDCVSWAAIISGYAQTG 314
+ + +++ N+++T Y D+ LF D D VSW I++ Q
Sbjct: 393 IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Query: 315 HYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGN 374
E L +F + + T L C +I++L+LG Q+H +KTG F+ N
Sbjct: 453 QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKN 512
Query: 375 ALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 434
L+ MY KCGS+G+A +F+ ++ +DVVSW+T+I GYA+ GFG++AL++F+ MK+ G++P
Sbjct: 513 GLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEP 572
Query: 435 DEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL 494
+ +T VGVL+ACSH GL++ G + + +M ++ ++P+ +H +C++DLL RAGRL EA+
Sbjct: 573 NHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERF 632
Query: 495 MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRW 554
+ M EP W LL A + GN L +KAAE + K++P NS +VLL +++A+SG W
Sbjct: 633 IDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNW 692
Query: 555 ADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE 614
+A +RS M+ V+K+ G SW+E+++KIH F D FHPE+D IY L + +M E
Sbjct: 693 ENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDE 752
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 158/310 (50%), Gaps = 14/310 (4%)
Query: 214 VSGYVQNGMLDEARTFFDQMPQKNEI------SYNAMVAGYVQSNKMDMARELFEAMPSR 267
++ ++ EA FD QKN +Y +++ S + R++ + + +
Sbjct: 38 INSLCKSNFYREALEAFD-FAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNS 96
Query: 268 NVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 323
N N +++ YG+ G + AR++FD MP+R+ VS+ ++I+GY+Q G EA+ ++
Sbjct: 97 NCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLY 156
Query: 324 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 383
+++ ++ ++ F + CA + + LGKQ+H QV+K + NAL+ MY +
Sbjct: 157 LKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRF 216
Query: 384 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV-KPDEITMVGV 442
+ +A+ VF GI KD++SW+++IAG+++ GF +AL + M + GV P+E
Sbjct: 217 NQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 276
Query: 443 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 502
L ACS D G++ + + + ++ + D+ R G L A+ + + P
Sbjct: 277 LKACSSLLRPDYGSQ-IHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RP 334
Query: 503 PAASWGALLG 512
ASW ++
Sbjct: 335 DTASWNVIIA 344
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 217/629 (34%), Positives = 338/629 (53%), Gaps = 57/629 (9%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
R HC RV + + N++++ Y + + A +F + D S+N+M+ G
Sbjct: 61 RQIHC----RVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDG 116
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISW 117
YVR+RRL DA +LFD MP++ VS+ ++ GYAQN EA E+F +M + N ++
Sbjct: 117 YVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTL 176
Query: 118 NGLLAAYVHNGRIEEACRLFDS-----KSDWELISWNCLMGGFVKRKMLGAARKLFDKMH 172
+++A H G I + CR+ S K + + L+ + L ARKLFD+M
Sbjct: 177 ATVISACSHLGGIWD-CRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
R++V+WN M++GY++ G + QA+ LFDQ +D+ +W M+ G ++ LDEA ++ +
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 233 M------PQK----NEISYNAMVAG-----------------------------YVQSNK 253
M P + + +S +A G Y SN
Sbjct: 296 MLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 355
Query: 254 MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 313
+ +A + FEA +++S N +I G+ +NG + QAR++FD +D SW A+ISGYAQ+
Sbjct: 356 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQS 415
Query: 314 GHYEEALNMFIE-IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 372
+ AL++F E I + T S + + +LE GK+ H + + +
Sbjct: 416 LSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNL 475
Query: 373 GNALLGMYFKCGSIGEANDVF---EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 429
A++ MY KCGSI A ++F + I + WN +I G A HG K AL ++ +++
Sbjct: 476 TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQS 535
Query: 430 IGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE 489
+ +KP+ IT VGVLSAC HAGL++ G YF SM D+ + P KHY CM+DLLG+AGRLE
Sbjct: 536 LPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLE 595
Query: 490 EAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYA 549
EA+++++ MP + WG LL ASR HGN E+ E AA + ++P + G V+LSN+YA
Sbjct: 596 EAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYA 655
Query: 550 ASGRWADAGNMRSRMRDVGVQKVTGYSWV 578
+GRW D +R MR V+ +S V
Sbjct: 656 DAGRWEDVALVREEMRTRDVEWSRAFSGV 684
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 70/277 (25%)
Query: 341 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV-------- 392
AL +CA + G+QIH +V+K+G ++ ++ N++L MY KC + +A V
Sbjct: 47 ALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLD 106
Query: 393 -----------------------FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 429
F+ + E+ VS+ T+I GYA++ +A+ +F M+
Sbjct: 107 SASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRN 166
Query: 430 IGVKPDEITMVGVLSACSHAG---------------------LIDRGTEYFYSM------ 462
+G+ +E+T+ V+SACSH G + + Y +
Sbjct: 167 LGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKD 226
Query: 463 -NKDYSVTPSSKHYT--CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 519
K + P T M++ +AG +E+A++L + E SWG + I G
Sbjct: 227 ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT-EKDIVSWGTM-----IDGC 280
Query: 520 TELGEKAAEMVFKMEPHNSGMY---VLLSNLYAASGR 553
+ +V+ E GM V++ +L +AS R
Sbjct: 281 LRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASAR 317
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 331/629 (52%), Gaps = 74/629 (11%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
N ++ Y R+ + +AR+LFD+MP R+ SWN M+ GY+ + G + R FD MP++D
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGY 125
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS----- 139
SWN ++SG+A+ G AR +F MP K+ ++ N LL Y+ NG EEA RLF
Sbjct: 126 SWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA 185
Query: 140 ---------KSDWELISWNC--------LMGG--------------FVKRKMLGAARKLF 168
K+ EL + C L+GG + K L A +
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 169 DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEART 228
+++ D S + +ISGYA G +++++ LFD+ ++ V W +M+SGY+ N M EA
Sbjct: 246 EQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALV 305
Query: 229 FFDQMPQKNEISYNAMVA--------GYVQSNK---------------------MDM--- 256
F++M + + A G++++ K +DM
Sbjct: 306 LFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSK 365
Query: 257 ------ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 310
A +LF + S + N+MI Y G I A+++F+ + + +SW ++ +G+
Sbjct: 366 CGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGF 425
Query: 311 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 370
+Q G E L F ++ + + + S +S CA I++LELG+Q+ + G ++
Sbjct: 426 SQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQ 485
Query: 371 FVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 430
V ++L+ +Y KCG + VF+ + + D V WN+MI+GYA +G G +A+ +F+ M
Sbjct: 486 VVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVA 545
Query: 431 GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEE 490
G++P +IT + VL+AC++ GL++ G + F SM D+ P +H++CM+DLL RAG +EE
Sbjct: 546 GIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEE 605
Query: 491 AQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAA 550
A +L+ MPF+ + W ++L +G +G+KAAE + ++EP NS YV LS ++A
Sbjct: 606 AINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFAT 665
Query: 551 SGRWADAGNMRSRMRDVGVQKVTGYSWVE 579
SG W + +R MR+ V K G SW +
Sbjct: 666 SGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 251/554 (45%), Gaps = 59/554 (10%)
Query: 27 MISGYLRNARFSLARDLFDKMPQRDLVSWNVML--TGYVRNR----RLGDARRLFDSMPQ 80
MI Y + RF L+ M + D + V L + RNR R + L
Sbjct: 1 MILKYNSSYRFYLSSSFLQAM-EVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLS 59
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSK 140
V+ N +L Y+++G AR +F +MP +N SWN ++ Y+++G + R FD
Sbjct: 60 SIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM 119
Query: 141 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD 200
+ + SWN ++ GF K L AR+LF+ M +DVV+ N+++ GY +G +A LF
Sbjct: 120 PERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFK 179
Query: 201 Q-SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMD 255
+ + D T T ++ + L + Q+ + + +++V Y + +
Sbjct: 180 ELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR 239
Query: 256 MARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 315
MA + E + + S + +I+GY G + ++R LFD R + W ++ISGY
Sbjct: 240 MASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNM 299
Query: 316 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 375
EAL +F E++ + +R T + ++ C + LE GKQ+H K G V +
Sbjct: 300 KMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST 358
Query: 376 LLGMYFKCGS-------------------------------IGEANDVFEGIEEKDVVSW 404
LL MY KCGS I +A VFE IE K ++SW
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 418
Query: 405 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF----- 459
N+M G++++G + L F M + + DE+++ V+SAC+ ++ G + F
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI 478
Query: 460 YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 519
++ D V+ S +IDL + G +E + + M + W +++ +G
Sbjct: 479 VGLDSDQVVSSS------LIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQ 531
Query: 520 TELGEKAAEMVFKM 533
G +A ++ KM
Sbjct: 532 ---GFEAIDLFKKM 542
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/596 (33%), Positives = 321/596 (53%), Gaps = 24/596 (4%)
Query: 49 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 108
++ V W L G+V A +LF +P+ DVV WN M+ G+++ E ++
Sbjct: 70 KKLFVFWCSRLGGHVSY-----AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLN 124
Query: 109 MPHKNAISWNGLLAAYVHNGRIEEA----------CRLFDSKSDWELISWNCLMGGFVKR 158
M K ++ + ++ NG + C + L N L+ +
Sbjct: 125 M-LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLC 183
Query: 159 KMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMV 214
++ AR +FD+ DV SWN MISGY + + ++ L + V T ++
Sbjct: 184 GLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVL 243
Query: 215 SGYVQNGMLDEARTFFDQMPQ-KNEISY---NAMVAGYVQSNKMDMARELFEAMPSRNVS 270
S + D + + + + K E S NA+V Y +MD+A +F +M +R+V
Sbjct: 244 SACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
SW +++ GY + G++ AR FD MP RD +SW +I GY + G + E+L +F E++ G
Sbjct: 304 SWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAG 363
Query: 331 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 390
+ T L+ CA + +LE+G+ I + K + VGNAL+ MYFKCG +A
Sbjct: 364 MIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQ 423
Query: 391 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 450
VF ++++D +W M+ G A +G G++A+ VF M+ + ++PD+IT +GVLSAC+H+G
Sbjct: 424 KVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSG 483
Query: 451 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 510
++D+ ++F M D+ + PS HY CM+D+LGRAG ++EA +++R MP P + WGAL
Sbjct: 484 MVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGAL 543
Query: 511 LGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
LGASR+H + + E AA+ + ++EP N +Y LL N+YA RW D +R ++ DV ++
Sbjct: 544 LGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIK 603
Query: 571 KVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 626
K G+S +EV H+F GD H + + IY LEEL + Y+ T +L +
Sbjct: 604 KTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFE 659
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 161/325 (49%), Gaps = 20/325 (6%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV- 83
NA++ Y +AR +FD+ + D+ SWN+M++GY R + ++ L M + V
Sbjct: 174 NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVS 233
Query: 84 ---VSWNAMLSGYAQNGYADEAREVF-YQMPHKNAISW---NGLLAAYVHNGRIEEACRL 136
V+ +LS ++ D + V Y K S N L+ AY G ++ A R+
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRI 293
Query: 137 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 196
F S ++ISW ++ G+V+R L AR FD+M VRD +SW MI GY + G +++
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESL 353
Query: 197 NLFDQSPH----QDVFTWTAMVSGYVQNGMLDEA---RTFFDQMPQKNEISY-NAMVAGY 248
+F + D FT ++++ G L+ +T+ D+ KN++ NA++ Y
Sbjct: 354 EIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMY 413
Query: 249 VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF----DMMPQRDCVSWA 304
+ + A+++F M R+ +W M+ G NG +A K+F DM Q D +++
Sbjct: 414 FKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYL 473
Query: 305 AIISGYAQTGHYEEALNMFIEIKRD 329
++S +G ++A F +++ D
Sbjct: 474 GVLSACNHSGMVDQARKFFAKMRSD 498
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 210/500 (42%), Gaps = 101/500 (20%)
Query: 38 SLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGY 93
S A LF K+P+ D+V WN M+ G+ + G+ RL+ +M ++ V ++ +L+G
Sbjct: 85 SYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGL 144
Query: 94 AQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW 148
++G A + + K N N L+ Y G ++ A +FD + ++ SW
Sbjct: 145 KRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSW 204
Query: 149 NCLMGGFVKRK--------------------------MLGAARKLFDKMHVRDVVSW--- 179
N ++ G+ + K +L A K+ DK + V +
Sbjct: 205 NLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE 264
Query: 180 ----------NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF 229
N +++ YA G+M A +F +DV +WT++V GYV+ G L ART+
Sbjct: 265 CKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTY 324
Query: 230 FDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR---------------------- 267
FDQMP ++ IS+ M+ GY+++ + + E+F M S
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 268 NVSSW-----------------NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 310
+ W N +I Y + G +A+K+F M QRD +W A++ G
Sbjct: 385 EIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGL 444
Query: 311 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ------VVKT 364
A G +EA+ +F +++ + T+ LS C ++ ++ + + +
Sbjct: 445 ANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS 504
Query: 365 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHGFGKQALMV 423
GC V +LG + G + EA ++ + + + W ++ H + +
Sbjct: 505 LVHYGCMVD--MLG---RAGLVKEAYEILRKMPMNPNSIVWGALLGASRLH--NDEPMAE 557
Query: 424 FESMKTIGVKPDEITMVGVL 443
+ K + ++PD + +L
Sbjct: 558 LAAKKILELEPDNGAVYALL 577
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 43/298 (14%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
NA+++ Y +A +F M RD++SW ++ GYV L AR FD MP +D +
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAI----SWNGLLAAYVHNGRIEEACRLFDSK 140
SW M+ GY + G +E+ E+F +M I + +L A H G +E
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE--------- 385
Query: 141 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLF 199
+G ++K DK ++ DVV N +I Y + G +A+ +F
Sbjct: 386 -----------IGEWIK--------TYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 200 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMD 255
+D FTWTAMV G NG EA F QM Q ++I+Y +++ S +D
Sbjct: 427 HDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVD 486
Query: 256 MARELFEAMPS-----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAII 307
AR+ F M S ++ + M+ G+ G + +A ++ MP + + W A++
Sbjct: 487 QARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 49/260 (18%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G D A+R+F +M R +S+ +++ GY+ LAR FD+MP RD +SW +M+ GY+
Sbjct: 285 GEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYL 344
Query: 64 RNRRLGDARRLFDSMP---------------------------------------QKDVV 84
R ++ +F M + DVV
Sbjct: 345 RAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVV 404
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 144
NA++ Y + G +++A++VF+ M ++ +W ++ +NG+ +EA ++F D
Sbjct: 405 VGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMS 464
Query: 145 L----ISWNCLMGGFVKRKMLGAARKLFDKMHV-----RDVVSWNTMISGYAQDGDMSQA 195
+ I++ ++ M+ ARK F KM +V + M+ + G + +A
Sbjct: 465 IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEA 524
Query: 196 KNLFDQSP-HQDVFTWTAMV 214
+ + P + + W A++
Sbjct: 525 YEILRKMPMNPNSIVWGALL 544
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 111/253 (43%), Gaps = 53/253 (20%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP--------------- 48
G+ A F+ MP R +S+ MI GYLR F+ + ++F +M
Sbjct: 316 GNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVL 375
Query: 49 ------------------------QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
+ D+V N ++ Y + A+++F M Q+D
Sbjct: 376 TACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKF 435
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLF--- 137
+W AM+ G A NG EA +VF+QM + I++ G+L+A H+G +++A + F
Sbjct: 436 TWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
Query: 138 --DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMI--SGYAQDGDM 192
D + + L+ + C++ + ++ A ++ KM + + + W ++ S D M
Sbjct: 496 RSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPM 555
Query: 193 SQ--AKNLFDQSP 203
++ AK + + P
Sbjct: 556 AELAAKKILELEP 568
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 293/532 (55%), Gaps = 17/532 (3%)
Query: 190 GDMSQAKNLFDQ-SPHQDVFTWTAMVSGYVQ-----NGMLDEARTFFDQMPQKNEISYNA 243
G +S A+ LFD W ++ G+ N +L R + + + ++N
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 244 MVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRD 299
+ + + E+ ++ + +++ Y NG + A K+FD MP RD
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 300 CVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHG 359
VSW +I ++ G + +AL+M+ + +G + T LS+CA ++AL +G +H
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 360 QVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQ 419
E+ FV NAL+ MY KCGS+ A VF G+ ++DV++WN+MI GY HG G +
Sbjct: 233 IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVE 292
Query: 420 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 479
A+ F M GV+P+ IT +G+L CSH GL+ G E+F M+ + +TP+ KHY CM+
Sbjct: 293 AISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMV 352
Query: 480 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 539
DL GRAG+LE + +++ W LLG+ +IH N ELGE A + + ++E N+G
Sbjct: 353 DLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAG 412
Query: 540 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDR 599
YVL++++Y+A+ +MR +R +Q V G+SW+E+ +++HKF V D HPE
Sbjct: 413 DYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAV 472
Query: 600 IYAFLEELDLKMRREGY----VSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAG 655
IY+ L E+ + GY + T L D + HSEKLA+A+G++ AG
Sbjct: 473 IYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSAD---TSHSEKLAIAYGLMRTTAG 529
Query: 656 RPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+R+ KNLRVC DCH+ K++SK R II+RD RFHHF +GICSC DYW
Sbjct: 530 TTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 139/333 (41%), Gaps = 60/333 (18%)
Query: 12 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR-----NR 66
+FN + R +VS ++G L +A+ L D FD P WN ++ G+ N
Sbjct: 39 IFNHLLRFCAVS----VTGSLSHAQ--LLFDHFDSDPSTS--DWNYLIRGFSNSSSPLNS 90
Query: 67 RLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLA 122
L R L S+ + D+ ++N L + + E+ + +AI L+
Sbjct: 91 ILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVR 150
Query: 123 AYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 182
Y NG +E A K+FD+M VRD+VSWN M
Sbjct: 151 CYSANGSVE-------------------------------IASKVFDEMPVRDLVSWNVM 179
Query: 183 ISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEA----RTFFDQMP 234
I ++ G +QA +++ + ++ D +T A++S L+ R D
Sbjct: 180 ICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRC 239
Query: 235 QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDM 294
+ NA++ Y + ++ A +F M R+V +WN+MI GYG +G +A F
Sbjct: 240 ESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRK 299
Query: 295 M----PQRDCVSWAAIISGYAQTGHYEEALNMF 323
M + + +++ ++ G + G +E + F
Sbjct: 300 MVASGVRPNAITFLGLLLGCSHQGLVKEGVEHF 332
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
D + +++ Y+ +G + A +FD+ P +D+ +W M+ + G+ ++A + + +M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 235 QK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGDIA 286
+ + + A+++ + ++M L S N +I Y + G +
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
A +F+ M +RD ++W ++I GY GH EA++ F ++ G N TF L C+
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGN--ALLGMYFKCGSIGEAND-VFEGIEEKDVVS 403
++ G + H +++ + + V + ++ +Y + G + + + ++ +D V
Sbjct: 321 HQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVL 379
Query: 404 WNTMIAGYARH 414
W T++ H
Sbjct: 380 WRTLLGSCKIH 390
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 17/230 (7%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
D + ++ Y N + A ++FD MP +D+VSWN M+ ++ G ++A ++ +M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 111 HK----NAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLG 162
++ ++ + LL++ H + L D + + + N L+ + K L
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 163 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYV 218
A +F+ M RDV++WN+MI GY G +A + F + V T+ ++ G
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 219 QNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEA 263
G++ E F+ M + ++ Y MV Y ++ +++ + E+ A
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYA 370
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 43/179 (24%)
Query: 3 NGHCDSALRVFNTMPRRSSVSYNAMISGY----LRNARFS-------------------- 38
NG + A +VF+ MP R VS+N MI + L N S
Sbjct: 155 NGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVAL 214
Query: 39 ---------------LARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV 83
L R D + + N ++ Y + L +A +F+ M ++DV
Sbjct: 215 LSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDV 274
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFD 138
++WN+M+ GY +G+ EA F +M NAI++ GLL H G ++E F+
Sbjct: 275 LTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFE 333
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 333/624 (53%), Gaps = 70/624 (11%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQ---KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA 114
+++ Y R L DAR +F+++ D+ WN++L +G + A E++ M +
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQR-G 153
Query: 115 ISWNG-----LLAAYVHNGRIEEACRLFDS-------KSDWELISWNCLMGGFVKRKMLG 162
++ +G +L A + GR CR F + K + ++ N L+ + K +G
Sbjct: 154 LTGDGYILPLILRACRYLGRFG-LCRAFHTQVIQIGLKENLHVV--NELLTLYPKAGRMG 210
Query: 163 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYV 218
A LF +M VR+ +SWN MI G++Q+ D A +F+ + D TWT+++S +
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 219 QNGMLDEARTFFDQMPQKNEI--------------------------------------- 239
Q G ++ +F M
Sbjct: 271 QCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLP 330
Query: 240 SYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ-- 297
S NA++ Y + K+ A LF + ++ + SWN++IT + G + +A LF + +
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 298 ------RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
+ V+W ++I G G +++L F +++ N T C LS CA++ AL
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPAL 450
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
LG++IHG V++T V NAL+ MY KCG + E + VFE I +KD++SWN++I GY
Sbjct: 451 NLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGY 510
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
HGF ++AL +F+ M + G PD I +V VLSACSHAGL+++G E FYSM+K + + P
Sbjct: 511 GMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 531
+HY C++DLLGR G L+EA ++++NMP EP GALL + R+H N ++ E A +
Sbjct: 571 QEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLS 630
Query: 532 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD 591
+EP +G Y+LLSN+Y+A GRW ++ N+R+ + ++KV+G SW+EV+ K +KF+ G
Sbjct: 631 VLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGS 690
Query: 592 CFHPEKDRIYAFLEELDLKMRREG 615
E + IY LE+L M ++G
Sbjct: 691 IVQSEFETIYPVLEDLVSHMLKKG 714
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 186/424 (43%), Gaps = 67/424 (15%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNAR----FSLARDLFDKMPQ----RDL 52
+ +G ++AL ++ M +R ++ LR R F L R ++ Q +L
Sbjct: 134 VSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENL 193
Query: 53 VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK 112
N +LT Y + R+GDA LF MP ++ +SWN M+ G++Q + A ++F M +
Sbjct: 194 HVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQRE 253
Query: 113 ----NAISWNGLLAAYVHNGRIEEACRLFD------------------------------ 138
+ ++W +L+ + G+ E+ + F
Sbjct: 254 EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIA 313
Query: 139 -------SKSDWE--LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQD 189
K +E L S N L+ + K+ + A LF ++ + + SWN++I+ +
Sbjct: 314 EKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDA 373
Query: 190 GDMSQAKNLFDQ--------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKN 237
G + +A +LF + + +V TWT+++ G G D++ +F QM N
Sbjct: 374 GKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLAN 433
Query: 238 EISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFD 293
++ +++ + +++ RE+ S N+ N ++ Y + G +++ +F+
Sbjct: 434 SVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFE 493
Query: 294 MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALEL 353
+ +D +SW +II GY G E+AL+MF + G + LS C+ +E
Sbjct: 494 AIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEK 553
Query: 354 GKQI 357
G++I
Sbjct: 554 GREI 557
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 176/450 (39%), Positives = 274/450 (60%), Gaps = 4/450 (0%)
Query: 144 ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP 203
+L NCL+G ++K LG +R++FD+M RD VS+N+MI GY + G + A+ LFD P
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 214
Query: 204 HQ--DVFTWTAMVSGYVQNG-MLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMAREL 260
+ ++ +W +M+SGY Q +D A F MP+K+ IS+N+M+ GYV+ +++ A+ L
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGL 274
Query: 261 FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 320
F+ MP R+V +W TMI GY + G + A+ LFD MP RD V++ ++++GY Q ++ EAL
Sbjct: 275 FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEAL 334
Query: 321 NMFIEIKRDGESL-NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 379
+F +++++ L + +T L A + L +H +V+ + G +G AL+ M
Sbjct: 335 EIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDM 394
Query: 380 YFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 439
Y KCGSI A VFEGIE K + WN MI G A HG G+ A + ++ + +KPD+IT
Sbjct: 395 YSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITF 454
Query: 440 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 499
VGVL+ACSH+GL+ G F M + + + P +HY CM+D+L R+G +E A++L+ MP
Sbjct: 455 VGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 514
Query: 500 FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGN 559
EP W L A H E GE A+ + +N YVLLSN+YA+ G W D
Sbjct: 515 VEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRR 574
Query: 560 MRSRMRDVGVQKVTGYSWVEVQNKIHKFTV 589
+R+ M++ ++K+ G SW+E+ ++H+F V
Sbjct: 575 VRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 194/385 (50%), Gaps = 28/385 (7%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
DL N ++ Y++ LG +R++FD MP++D VS+N+M+ GY + G ARE+F MP
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 214
Query: 111 --HKNAISWNGLLAAYVHNGR-IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKL 167
KN ISWN +++ Y ++ A +LF + +LISWN ++ G+VK + A+ L
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGL 274
Query: 168 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
FD M RDVV+W TMI GYA+ G + AK LFDQ PH+DV + +M++GYVQN EA
Sbjct: 275 FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEAL 334
Query: 228 TFFDQMPQKNEI-----SYNAMVAGYVQ----SNKMDMARELFEAMPSRNVSSWNTMITG 278
F M +++ + + ++ Q S +DM + E +I
Sbjct: 335 EIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDM 394
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
Y + G I A +F+ + + W A+I G A G E A +M ++I+R + TF
Sbjct: 395 YSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITF 454
Query: 339 SCALSTCAD-------IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
L+ C+ + EL ++ H ++ GC V + + GSI A +
Sbjct: 455 VGVLNACSHSGLVKEGLLCFELMRRKH-KIEPRLQHYGCMV-----DILSRSGSIELAKN 508
Query: 392 VFE--GIEEKDVVSWNTMIAGYARH 414
+ E +E DV+ W T + + H
Sbjct: 509 LIEEMPVEPNDVI-WRTFLTACSHH 532
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 204/413 (49%), Gaps = 27/413 (6%)
Query: 11 RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP--QRDLVSWNVMLTGYVRNRRL 68
++F+ MP+R SVSYN+MI GY++ AR+LFD MP ++L+SWN M++GY +
Sbjct: 177 QMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDG 236
Query: 69 GD-ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 127
D A +LF MP+KD++SWN+M+ GY ++G ++A+ +F MP ++ ++W ++ Y
Sbjct: 237 VDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKL 296
Query: 128 GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH-----VRDVVSWNTM 182
G + A LFD +++++N +M G+V+ K A ++F M + D + +
Sbjct: 297 GFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIV 356
Query: 183 ISGYAQDGDMSQAKNLFDQSPHQDVF----TWTAMVSGYVQNGMLDEARTFFDQMPQKNE 238
+ AQ G +S+A ++ + + A++ Y + G + A F+ + K+
Sbjct: 357 LPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSI 416
Query: 239 ISYNAMVAGY----VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDM 294
+NAM+ G + + DM ++ + ++ ++ +G + + F++
Sbjct: 417 DHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFEL 476
Query: 295 MPQRDCVS-----WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
M ++ + + ++ +++G E A N+ E+ + + TF L+ C+
Sbjct: 477 MRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTF---LTACSHHK 533
Query: 350 ALELGKQIHGQ-VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
E G+ + +++ GY +V L MY G + V ++E+ +
Sbjct: 534 EFETGELVAKHLILQAGYNPSSYV--LLSNMYASFGMWKDVRRVRTMMKERKI 584
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 148/296 (50%), Gaps = 29/296 (9%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNR 66
D A ++F MP + +S+N+MI GY+++ R A+ LFD MP+RD+V+W M+ GY +
Sbjct: 238 DIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLG 297
Query: 67 RLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG-----LL 121
+ A+ LFD MP +DVV++N+M++GY QN Y EA E+F M ++ + + +L
Sbjct: 298 FVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVL 357
Query: 122 AAYVHNGRIEEACRLFDSKSDWELISWNCLMGG---------FVKRKMLGAARKLFDKMH 172
A GR+ +A + ++ +GG + K + A +F+ +
Sbjct: 358 PAIAQLGRLSKAIDM-----HLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE 412
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEART 228
+ + WN MI G A G A ++ Q S D T+ +++ +G++ E
Sbjct: 413 NKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLL 472
Query: 229 FFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITG 278
F+ M +K++I Y MV +S +++A+ L E MP N W T +T
Sbjct: 473 CFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTA 528
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 27/246 (10%)
Query: 299 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIH 358
D W A+I ++ +AL + + +G S+++ + S L C+ + ++ G QIH
Sbjct: 85 DPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIH 144
Query: 359 GQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGK 418
G + KTG + F+ N L+G+Y KCG +G + +F+ + ++D VS+N+MI GY + G
Sbjct: 145 GFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 204
Query: 419 QALMVFESMKTIGVKPDEI-------TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
A +F+ M P E+ +M+ + S +D ++ F M + ++
Sbjct: 205 SARELFDLM------PMEMKNLISWNSMISGYAQTSDG--VDIASKLFADMPEKDLIS-- 254
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG-EKAAEMV 530
+ MID + GR+E+A+ L MP +W A+ I G +LG A+ +
Sbjct: 255 ---WNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTW-----ATMIDGYAKLGFVHHAKTL 305
Query: 531 FKMEPH 536
F PH
Sbjct: 306 FDQMPH 311
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 182/528 (34%), Positives = 299/528 (56%), Gaps = 9/528 (1%)
Query: 189 DGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAM 244
+ M+ A ++F F + M+ GYV +EA F+++M Q+ + +Y +
Sbjct: 79 ENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 245 VAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 300
+ + + +++ F+ +V N++I YG+ G++ + +F+ + +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHG 359
SW++++S A G + E L +F + + S AL CA+ AL LG IHG
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 360 QVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQ 419
+++ E V +L+ MY KCG + +A +F+ +E+++ ++++ MI+G A HG G+
Sbjct: 259 FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 420 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 479
AL +F M G++PD + V VL+ACSH+GL+ G F M K+ V P+++HY C++
Sbjct: 319 ALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLV 378
Query: 480 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 539
DLLGRAG LEEA + ++++P E W L R+ N ELG+ AA+ + K+ HN G
Sbjct: 379 DLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPG 438
Query: 540 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDR 599
Y+L+SNLY+ W D R+ + G+++ G+S VE++ K H+F D HP+
Sbjct: 439 DYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKE 498
Query: 600 IYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIR 659
IY L +++ +++ EGY +L +V+EEEK+ LK HS+K+A+AFG+L P G I+
Sbjct: 499 IYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIK 558
Query: 660 VIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+ +NLR+C DCH K IS I R I++RD +RFH F G CSC DYW
Sbjct: 559 IARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 157/348 (45%), Gaps = 32/348 (9%)
Query: 89 MLSGYAQNGYADE---AREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSK----S 141
+L+ A +G+ + A +F + +N ++ YV+ EEA ++ +
Sbjct: 69 VLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGN 128
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFDKMHV----RDVVSWNTMISGYAQDGDMSQAKN 197
+ + ++ CL+ + K + +++ ++ DV N++I+ Y + G+M +
Sbjct: 129 EPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSA 188
Query: 198 LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY--NAMVAGYVQSNK-- 253
+F++ + +W++MVS GM E F M + + + MV+ +
Sbjct: 189 VFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTG 248
Query: 254 -----MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 308
M + L + N+ +++ Y + G + +A +F M +R+ ++++A+IS
Sbjct: 249 ALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMIS 308
Query: 309 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI------HGQVV 362
G A G E AL MF ++ ++G + + L+ C+ ++ G+++ G+V
Sbjct: 309 GLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVE 368
Query: 363 KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIA 409
T GC V LLG + G + EA + + I EK+ V W T ++
Sbjct: 369 PTAEHYGCLVD--LLG---RAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 135/327 (41%), Gaps = 58/327 (17%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVR 64
A +F + + +N MI GY+ F A +++M QR D ++ +L R
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 65 NRRLGDARRL----FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGL 120
+ + + +++ F + DV N++++ Y + G + + VF ++ K A SW+ +
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 121 LAAYVHNGRIEEACRLF----------------------------------------DSK 140
++A G E LF +
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 141 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD 200
S+ +I L+ +VK L A +F KM R+ ++++ MISG A G+ A +F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 201 QSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQS 251
+ + D + ++++ +G++ E R F +M ++ ++ Y +V ++
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 252 NKMDMARELFEAMP-SRNVSSWNTMIT 277
++ A E +++P +N W T ++
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 355 bits (910), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 284/509 (55%), Gaps = 42/509 (8%)
Query: 149 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 208
N L+G ++K A K+FD+MH+R++ SWN M+SGY + G + +A+ +FD P +DV
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 209 TWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISY---------------------NA 243
+W MV GY Q+G L EA F+ + + NE S+
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 244 MVAG--------------YVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQAR 289
+VAG Y + +M+ A+ F+ M +++ W T+I+GY + GD+ A
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
KLF MP+++ VSW A+I+GY + G AL++F ++ G + TFS L A IA
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMI 408
+L GK+IHG +++T V ++L+ MY K GS+ + VF ++K D V WNTMI
Sbjct: 326 SLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMI 385
Query: 409 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 468
+ A+HG G +AL + + M V+P+ T+V +L+ACSH+GL++ G +F SM + +
Sbjct: 386 SALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI 445
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 528
P +HY C+IDLLGRAG +E + MPFEP W A+LG RIHGN ELG+KAA+
Sbjct: 446 VPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAD 505
Query: 529 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFT 588
+ K++P +S Y+LLS++YA G+W +R M+ V K SW+E++ K+ FT
Sbjct: 506 ELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFT 565
Query: 589 VGDC--FHPEKDRIYAFLEELDLKMRREG 615
V D H K+ IY L L + E
Sbjct: 566 VSDGSHAHARKEEIYFILHNLAAVIEEEA 594
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 220/436 (50%), Gaps = 44/436 (10%)
Query: 18 RRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDS 77
R +++ N +I Y++ + A +FD+M R+L SWN M++GYV++ L AR +FDS
Sbjct: 79 RPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDS 138
Query: 78 MPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN-----GLLAAYVHNGRIEE 132
MP++DVVSWN M+ GYAQ+G EA FY+ ++ I +N GLL A V + +++
Sbjct: 139 MPERDVVSWNTMVIGYAQDGNLHEAL-WFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQ- 196
Query: 133 ACRLFDSKSDWEL--------ISWNC-LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMI 183
+ ++ ++ + +C ++ + K + +A++ FD+M V+D+ W T+I
Sbjct: 197 ----LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLI 252
Query: 184 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEI 239
SGYA+ GDM A+ LF + P ++ +WTA+++GYV+ G + A F +M + +
Sbjct: 253 SGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQF 312
Query: 240 SYNAMVAGYVQSNKMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLFDMM 295
++++ + + +E+ M NV +++I Y ++G + + ++F +
Sbjct: 313 TFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRIC 372
Query: 296 PQR-DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 354
+ DCV W +IS AQ G +AL M ++ + NR+T L+ C+ +E G
Sbjct: 373 DDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEG 432
Query: 355 KQ------IHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTM 407
+ + +V C + LLG + G E E + E D WN +
Sbjct: 433 LRWFESMTVQHGIVPDQEHYACLID--LLG---RAGCFKELMRKIEEMPFEPDKHIWNAI 487
Query: 408 IAGYARHG---FGKQA 420
+ HG GK+A
Sbjct: 488 LGVCRIHGNEELGKKA 503
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 133/308 (43%), Gaps = 48/308 (15%)
Query: 300 CVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHG 359
CV+ + +S +A +A++ + + G L + L C D +L+ GK IH
Sbjct: 12 CVA-QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHR 70
Query: 360 QVVKTGYE-TGCFVGNALLGMYFKCGS-------------------------------IG 387
+ TG++ + N L+GMY KCG +
Sbjct: 71 HLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLV 130
Query: 388 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
A VF+ + E+DVVSWNTM+ GYA+ G +AL ++ + G+K +E + G+L+AC
Sbjct: 131 RARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACV 190
Query: 448 HAGLIDRGTEYFYSMNKDYSVTP--SSKHYTC-MIDLLGRAGRLEEAQDLMRNMPFEPPA 504
+ R + + V S+ +C +ID + G++E A+ M +
Sbjct: 191 KS----RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DI 245
Query: 505 ASWGALLGASRIHGNTELGE-KAAEMVF-KMEPHNSGMYVLLSNLYAASGRWADAGNMRS 562
W L I G +LG+ +AAE +F +M N + L Y G A ++
Sbjct: 246 HIWTTL-----ISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 563 RMRDVGVQ 570
+M +GV+
Sbjct: 301 KMIALGVK 308
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 354 bits (909), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 254/420 (60%), Gaps = 2/420 (0%)
Query: 190 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV 249
G ++ A +F + ++V WT+M++GY+ N L AR +FD P+++ + +N M++GY+
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 250 QSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG 309
+ M AR LF+ MP R+V SWNT++ GY GD+ ++FD MP+R+ SW +I G
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 310 YAQTGHYEEALNMFIEIKRDGESL-NRSTFSCALSTCADIAALELGKQIHGQVVKTGY-E 367
YAQ G E L F + +G + N +T + LS CA + A + GK +H GY +
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 368 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 427
V NAL+ MY KCG+I A +VF+GI+ +D++SWNTMI G A HG G +AL +F M
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 428 KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGR 487
K G+ PD++T VGVL AC H GL++ G YF SM D+S+ P +H C++DLL RAG
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGF 341
Query: 488 LEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNL 547
L +A + + MP + A W LLGAS+++ ++GE A E + K+EP N +V+LSN+
Sbjct: 342 LTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNI 401
Query: 548 YAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEEL 607
Y +GR+ DA ++ MRD G +K G SW+E + + KF HP + + L EL
Sbjct: 402 YGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 198/425 (46%), Gaps = 49/425 (11%)
Query: 97 GYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV 156
G A +VF +M KN + W ++ Y+ N + A R FD + +++ WN ++ G++
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 157 KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 216
+ + AR LFD+M RDV+SWNT++ GYA GDM + +FD P ++VF+W ++ G
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 217 YVQNGMLDEARTFFDQMPQK-----NEISYNAMVAGYVQSNKMDMARELFE-----AMPS 266
Y QNG + E F +M + N+ + +++ + D + + +
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 267 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 326
+V+ N +I YG+ G I A ++F + +RD +SW +I+G A GH EALN+F E+
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
K G S ++ TF L C + +E G Y F +++ CG +
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDG---------LAYFNSMFTDFSIMPEIEHCGCV 332
Query: 387 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
D++S R GF QA+ E + + VK D + +L A
Sbjct: 333 ------------VDLLS---------RAGFLTQAV---EFINKMPVKADAVIWATLLGAS 368
Query: 447 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL---MRNMPFEPP 503
+D G + K P+ ++ + ++ G AGR ++A L MR+ F+
Sbjct: 369 KVYKKVDIGEVALEELIKLEPRNPA--NFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKE 426
Query: 504 A-ASW 507
A SW
Sbjct: 427 AGVSW 431
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 174/382 (45%), Gaps = 56/382 (14%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G SA +VF M ++ V + +MI+GYL N AR FD P+RD+V WN M++GY+
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 64 RNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAA 123
+ +AR LFD MP +DV+SWN +L GYA G + VF MP +N SWNGL+
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 124 YVHNGRIEEACRLFDSKSD-----------------------WELISW------------ 148
Y NGR+ E F D ++ W
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 149 ------NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQS 202
N L+ + K + A ++F + RD++SWNTMI+G A G ++A NLF +
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 203 PHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYV-QSNK 253
+ D T+ ++ G++++ +F+ M EI + V + ++
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGF 341
Query: 254 MDMARELFEAMPSR-NVSSWNTMI--TGYGQNGDIAQA--RKLFDMMPQRDCVSWAAIIS 308
+ A E MP + + W T++ + + DI + +L + P R+ ++ + +
Sbjct: 342 LTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEP-RNPANFVMLSN 400
Query: 309 GYAQTGHYEEALNMFIEIKRDG 330
Y G +++A + + ++ G
Sbjct: 401 IYGDAGRFDDAARLKVAMRDTG 422
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/544 (35%), Positives = 305/544 (56%), Gaps = 30/544 (5%)
Query: 191 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQN-GMLDEARTFFDQMPQKNEISYN------- 242
D++ A +FD + F W ++ + +EA + +M ++ E S +
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 243 ----AMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR 298
A + G+ + ++ ++ + +V N +I YG G + ARK+FD MP+R
Sbjct: 158 LKACAYIFGFSEGKQVHC--QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPER 215
Query: 299 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIH 358
VSW ++I + G Y+ AL +F E++R E + T LS CA + +L LG H
Sbjct: 216 SLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP-DGYTMQSVLSACAGLGSLSLGTWAH 274
Query: 359 GQVVK---TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 415
+++ V N+L+ MY KCGS+ A VF+G++++D+ SWN MI G+A HG
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHG 334
Query: 416 FGKQALMVFESM--KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSK 473
++A+ F+ M K V+P+ +T VG+L AC+H G +++G +YF M +DY + P+ +
Sbjct: 335 RAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALE 394
Query: 474 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG-NTELGEKAAEMVFK 532
HY C++DL+ RAG + EA D++ +MP +P A W +LL A G + EL E+ A +
Sbjct: 395 HYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIG 454
Query: 533 MEPHN-------SGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIH 585
+ N SG YVLLS +YA++ RW D G +R M + G++K G S +E+ H
Sbjct: 455 TKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISH 514
Query: 586 KFTVGDCFHPEKDRIYAFLEELDLKMRREGYVS--STKLVLHDVEEEEKEHMLKYHSEKL 643
+F GD HP+ +IY L+ +D ++R GY+ S ++ + KE+ L+ HSE+L
Sbjct: 515 EFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERL 574
Query: 644 AVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSC 703
A+AFG++ +P PIR+ KNLRVC DCH K ISK+ II+RD RFHHF +G CSC
Sbjct: 575 AIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSC 634
Query: 704 GDYW 707
DYW
Sbjct: 635 LDYW 638
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 142/350 (40%), Gaps = 48/350 (13%)
Query: 102 AREVFYQMPHKNAISWNGLLAAYVHN-GRIEEACRLF----------DSKSDWELISWNC 150
A VF + + ++ WN L+ A H+ R EEA L+ K + + C
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 151 -LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFT 209
+ GF + K + ++ DV N +I Y G + A+ +FD+ P + + +
Sbjct: 162 AYIFGFSEGKQVHC--QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVS 219
Query: 210 WTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 269
W +M+ V+ G D A F +M + E GY + + + S ++
Sbjct: 220 WNSMIDALVRFGEYDSALQLFREMQRSFEPD------GYTMQSVLSAC----AGLGSLSL 269
Query: 270 SSW--------------------NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG 309
+W N++I Y + G + A ++F M +RD SW A+I G
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 310 YAQTGHYEEALNMFIEI--KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT-GY 366
+A G EEA+N F + KR+ N TF L C + G+Q +V+
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI 389
Query: 367 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHG 415
E ++ + + G I EA D+ + K D V W +++ + G
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 118/538 (21%), Positives = 210/538 (39%), Gaps = 110/538 (20%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQN-GYADEAREVFYQM-------PHKNAISWNGLLA 122
A R+FDS+ WN ++ A + +EA ++ +M P K+ +
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 123 AYV---HNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 179
AY+ G+ + C++ ++ N L+ + L ARK+FD+M R +VSW
Sbjct: 162 AYIFGFSEGK-QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSW 220
Query: 180 NTMISGYAQDGDMSQAKNLF---DQSPHQDVFTWTAMVSGYVQNGMLDE---ARTFF--- 230
N+MI + G+ A LF +S D +T +++S G L A F
Sbjct: 221 NSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 280
Query: 231 -DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQA- 288
D + + N+++ Y + + MA ++F+ M R+++SWN MI G+ +G +A
Sbjct: 281 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAM 340
Query: 289 ------------------------------------RKLFDMMPQRDCVS-----WAAII 307
R+ FDMM + C+ + I+
Sbjct: 341 NFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIV 400
Query: 308 SGYAQTGHYEEALNMFIEIKRDGESLN-RSTFSCALSTCADIAALELGKQIHGQVVKTGY 366
A+ G+ EA++M + + +++ RS + C A++EL ++I ++ T
Sbjct: 401 DLIARAGYITEAIDMVMSMPMKPDAVIWRSLLD---ACCKKGASVELSEEIARNIIGTKE 457
Query: 367 ETGCFVGNA-----LLGMYFKCGSIGEANDV--------FEGIEEKDVVSWNTMIAGYAR 413
+ GN LL + S NDV GI ++ S + I G +
Sbjct: 458 DNESSNGNCSGAYVLLSRVY--ASASRWNDVGIVRKLMSEHGIRKEPGCS-SIEINGISH 514
Query: 414 HGFG-----KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 468
F Q +++ +K I D + +G L S A L+D + +K+YS+
Sbjct: 515 EFFAGDTSHPQTKQIYQQLKVID---DRLRSIGYLPDRSQAPLVDATND----GSKEYSL 567
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 526
S+ L+ N+P + P + L + H T+L K
Sbjct: 568 RLHSERLAIAFGLI--------------NLPPQTPIRIFKNLRVCNDCHEVTKLISKV 611
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 53/240 (22%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR------------- 50
G D A +VF+ MP RS VS+N+MI +R + A LF +M +
Sbjct: 200 GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLS 259
Query: 51 ----------------------------DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD 82
D++ N ++ Y + L A ++F M ++D
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRD 319
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMPHK------NAISWNGLLAAYVHNGRIEEACRL 136
+ SWNAM+ G+A +G A+EA F +M K N++++ GLL A H G + + +
Sbjct: 320 LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQY 379
Query: 137 FDSKS-----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDG 190
FD + L + C++ + + A + M ++ D V W +++ + G
Sbjct: 380 FDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 55/251 (21%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 81
N +I Y LAR +FD+MP+R LVSWN M+ VR A +LF M +
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP 249
Query: 82 --------------------------------------DVVSWNAMLSGYAQNGYADEAR 103
DV+ N+++ Y + G A
Sbjct: 250 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 309
Query: 104 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE------LISWNCLMGGFVK 157
+VF M ++ SWN ++ + +GR EEA FD D +++ L+
Sbjct: 310 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNH 369
Query: 158 RKMLGAARKLFDKMHVRD------VVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-DVFTW 210
R + R+ FD M VRD + + ++ A+ G +++A ++ P + D W
Sbjct: 370 RGFVNKGRQYFDMM-VRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIW 428
Query: 211 TAMVSGYVQNG 221
+++ + G
Sbjct: 429 RSLLDACCKKG 439
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 108/265 (40%), Gaps = 26/265 (9%)
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYE---TGCFVGNALLGMYFKCGSIGEAN 390
++ FS A TC+D++ L KQ+H ++T Y F+ +L + + A
Sbjct: 48 HQRIFSLA-ETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAF 103
Query: 391 DVFEGIEEKDVVSWNTMIAGYARHGFGK-QALMVFESMKTIG-VKPDEITMVGVLSACSH 448
VF+ IE WNT+I A K +A M++ M G PD+ T VL AC++
Sbjct: 104 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 163
Query: 449 AGLIDRGTEYFYSMNK-----DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 503
G + + K D V +I L G G L+ A+ + MP E
Sbjct: 164 IFGFSEGKQVHCQIVKHGFGGDVYVNNG------LIHLYGSCGCLDLARKVFDEMP-ERS 216
Query: 504 AASWGALLGASRIHGNTELG-EKAAEMVFKMEPHNSGMYVLLSNLYA----ASGRWADAG 558
SW +++ A G + + EM EP M +LS + G WA A
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 559 NMRSRMRDVGVQKVTGYSWVEVQNK 583
+R DV + + S +E+ K
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCK 301
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/644 (31%), Positives = 351/644 (54%), Gaps = 38/644 (5%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
+++G+ D A VF+ +P +S+V++ MISG ++ R ++ LF ++ + NV+
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED-----NVVPD 248
Query: 61 GYVRNRRLGDARRL-------------FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFY 107
GY+ + L L + D N ++ Y + G A ++F
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 108 QMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLGA 163
MP+KN ISW LL+ Y N +EA LF S S + ++ + + ++ LG
Sbjct: 309 GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGF 368
Query: 164 ARKLFD---KMHV-RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 219
++ K ++ D N++I YA+ ++ A+ +FD DV + AM+ GY +
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 220 NGM---LDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRN 268
G L EA F M + + +++ +++ + +++++ F+ + +
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD 488
Query: 269 VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 328
+ + + +I Y + +R +FD M +D V W ++ +GY Q EEALN+F+E++
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQL 548
Query: 329 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 388
E + TF+ ++ ++A+++LG++ H Q++K G E ++ NALL MY KCGS +
Sbjct: 549 SRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608
Query: 389 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH 448
A+ F+ +DVV WN++I+ YA HG GK+AL + E M + G++P+ IT VGVLSACSH
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668
Query: 449 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 508
AGL++ G + F M + + + P ++HY CM+ LLGRAGRL +A++L+ MP +P A W
Sbjct: 669 AGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWR 727
Query: 509 ALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVG 568
+LL GN EL E AAEM +P +SG + +LSN+YA+ G W +A +R RM+ G
Sbjct: 728 SLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787
Query: 569 VQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR 612
V K G SW+ + ++H F D H + ++IY L++L +++R
Sbjct: 788 VVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/579 (24%), Positives = 260/579 (44%), Gaps = 84/579 (14%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG----------------YVRNRRL 68
N +I+ Y R AR +F+KMP+R+LVSW+ M++ + R R+
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 69 GDARRLFDSMPQ--------------------------KDVVSWNAMLSGYAQNGYADEA 102
+ S Q +DV ++ Y ++G D A
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 103 REVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLG 162
R VF +P K+ ++W +++ V GR + +LF ++L+ N + G++ +L
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF-----YQLMEDNVVPDGYILSTVLS 257
Query: 163 AARKLF-----DKMHVR--------DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFT 209
A L ++H D N +I Y + G + A LF+ P++++ +
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 210 WTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMP 265
WT ++SGY QN + EA F M + + + ++++ + + ++
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 266 SRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG---HYEE 318
N+ + N++I Y + + ARK+FD+ D V + A+I GY++ G E
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE 437
Query: 319 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 378
ALN+F +++ + TF L A + +L L KQIHG + K G F G+AL+
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALID 497
Query: 379 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
+Y C + ++ VF+ ++ KD+V WN+M AGY + ++AL +F ++ +PDE T
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557
Query: 439 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
+++A + + G E+ + K + + ++D+ + G E+A
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHK----- 611
Query: 499 PFEPPAA----SWGALLGASRIHGNTELGEKAAEMVFKM 533
F+ A+ W +++ + HG G+KA +M+ KM
Sbjct: 612 AFDSAASRDVVCWNSVISSYANHGE---GKKALQMLEKM 647
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 7/181 (3%)
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
R F+ L A L +HGQ++ G E ++ N L+ +Y + G + A VFE
Sbjct: 44 RREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFE 103
Query: 395 GIEEKDVVSWNTMIAGYARHGFGKQALMVF-ESMKTIGVKPDEITMVGVLSACSHAGLID 453
+ E+++VSW+TM++ HG +++L+VF E +T P+E + + ACS GL
Sbjct: 104 KMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDG 161
Query: 454 RGTEYFYSMNKDYSVTPSSKHY---TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 510
RG + + + + T +ID + G ++ A+ + +P E +W +
Sbjct: 162 RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTM 220
Query: 511 L 511
+
Sbjct: 221 I 221
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 236/781 (30%), Positives = 371/781 (47%), Gaps = 164/781 (20%)
Query: 1 MRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWN 56
++ G + A+ VF M R +++ +I+ Y+R + AR LF +M D+V+WN
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWN 296
Query: 57 VMLTGY--------------------VRNRR--LGDARRLFDSMPQKD---VVSWNAMLS 91
VM++G+ V++ R LG + D VV A+
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL 356
Query: 92 GYAQNGYA--------------DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF 137
G A N Y + A +VF + KN + WN ++ Y HNG + LF
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF 416
Query: 138 -DSKS---------------------DWE-----------------LISWNCLMGGFVKR 158
D KS D E L N L+ + K
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC 476
Query: 159 KMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----------------- 201
L AR++F++M RD V+WNT+I Y QD + S+A +LF +
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 202 ----------------------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 239
+D+ T ++++ Y + G++ +AR F +P+ + +
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV 596
Query: 240 SYNAMVAGYVQSNKMDMARELFEAMPSRNV-----------------------SSWNTMI 276
S NA++AGY Q+N ++ A LF+ M +R V + ++ I
Sbjct: 597 SMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655
Query: 277 T--GYGQNGD---------------IAQARKLF-DMMPQRDCVSWAAIISGYAQTGHYEE 318
T G+ G+ + +A LF ++ + V W ++SG++Q G YEE
Sbjct: 656 TKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEE 715
Query: 319 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 378
AL + E++ DG +++TF L C+ +++L G+ IH + ++ N L+
Sbjct: 716 ALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLID 775
Query: 379 MYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
MY KCG + ++ VF+ + + +VVSWN++I GYA++G+ + AL +F+SM+ + PDEI
Sbjct: 776 MYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEI 835
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
T +GVL+ACSHAG + G + F M Y + H CM+DLLGR G L+EA D +
Sbjct: 836 TFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEA 895
Query: 498 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADA 557
+P A W +LLGA RIHG+ GE +AE + ++EP NS YVLLSN+YA+ G W A
Sbjct: 896 QNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKA 955
Query: 558 GNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYV 617
+R MRD GV+KV GYSW++V+ + H F GD H E +I FLE+L M+ + V
Sbjct: 956 NALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVV 1015
Query: 618 S 618
+
Sbjct: 1016 N 1016
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 264/545 (48%), Gaps = 47/545 (8%)
Query: 11 RVFNTMPRRSSVSY----------------------NAMISGYLRNARFSLARDLFDKMP 48
+VF+ MP+R +++ NA++ Y + A+ S A FD +
Sbjct: 63 KVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL- 121
Query: 49 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGYAQNGYADEARE 104
++D+ +WN ML+ Y + G R F S+ + + +++ +LS A+ + R+
Sbjct: 122 EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ 181
Query: 105 VFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKM 160
+ M +N+ L+ Y RI +A R+F+ D + W CL G+VK +
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 161 LGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 216
A +F++M H D +++ T+I+ Y + G + A+ LF + DV W M+SG
Sbjct: 242 PEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 217 YVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSN-----KMDMA----RELFEAMPSR 267
+ + G A +F M +K+ + G V S +D+ E + +
Sbjct: 302 HGKRGCETVAIEYFFNM-RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 360
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
N+ +++++ Y + + A K+F+ + +++ V W A+I GYA G + + +F+++K
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 387
G +++ TF+ LSTCA LE+G Q H ++K FVGNAL+ MY KCG++
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 480
Query: 388 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
+A +FE + ++D V+WNT+I Y + +A +F+ M G+ D + L AC+
Sbjct: 481 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 540
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 507
H + +G + + ++ + + +ID+ + G +++A+ + ++P E S
Sbjct: 541 HVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSM 598
Query: 508 GALLG 512
AL+
Sbjct: 599 NALIA 603
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/632 (24%), Positives = 276/632 (43%), Gaps = 120/632 (18%)
Query: 2 RNGHCDSAL--------------RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM 47
RN +C AL RVF + ++V + + SGY++ A +F++M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 48 PQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAR 103
D +++ ++ Y+R +L DAR LF M DVV+WN M+SG+ + G A
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 104 EVFYQMPHKNAISWNGLLAAYVHNGRI-----------EEACRLFDSKSDWELISWNCLM 152
E F+ M + S L + + I EA +L + + + + L+
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN---IYVGSSLV 369
Query: 153 GGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF------------- 199
+ K + + AA K+F+ + ++ V WN MI GYA +G+ + LF
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 200 --------------------------DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 233
+ +++F A+V Y + G L++AR F++M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 234 PQKNEISYNAMVAGYVQSNKMDMARELFEAMP---------------------------- 265
++ +++N ++ YVQ A +LF+ M
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 266 -----------SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG 314
R++ + +++I Y + G I ARK+F +P+ VS A+I+GY+Q
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN- 608
Query: 315 HYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET-GCFVG 373
+ EEA+ +F E+ G + + TF+ + C +L LG Q HGQ+ K G+ + G ++G
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 374 NALLGMYFKCGSIGEANDVFEGIEE-KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 432
+LLGMY + EA +F + K +V W M++G++++GF ++AL ++ M+ GV
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Query: 433 KPDEITMVGVLSACSHAGLIDRGT---EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE 489
PD+ T V VL CS + G + + D S+ +ID+ + G ++
Sbjct: 729 LPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNT----LIDMYAKCGDMK 784
Query: 490 EAQDLMRNMPFEPPAASWGALLGASRIHGNTE 521
+ + M SW +L+ +G E
Sbjct: 785 GSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 221/481 (45%), Gaps = 68/481 (14%)
Query: 67 RLGDARRLFDSMPQKDVVSW----------------------NAMLSGYAQNGYADEARE 104
+L +R++FD MPQ+ ++ NA++ YA+ A +
Sbjct: 57 KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 105 VFYQMPHKNAISWNGLLAAYVHNGRIEEACR----LFDSKSDWELISWNCLMGGFVKRKM 160
F K+ +WN +L+ Y G+ + R LF+++ +++ ++ +
Sbjct: 117 QF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETN 175
Query: 161 LGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 216
+ R++ M R+ ++ YA+ +S A+ +F+ + WT + SG
Sbjct: 176 VEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSG 235
Query: 217 YVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW 272
YV+ G+ +EA F++M + + +++ ++ Y++ K+ AR LF M S +V +W
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAW 295
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
N MI+G+G+ G C + A+ F +++
Sbjct: 296 NVMISGHGKRG----------------CETV---------------AIEYFFNMRKSSVK 324
Query: 333 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 392
RST LS +A L+LG +H + +K G + +VG++L+ MY KC + A V
Sbjct: 325 STRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI 452
FE +EEK+ V WN MI GYA +G + + +F MK+ G D+ T +LS C+ + +
Sbjct: 385 FEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDL 444
Query: 453 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
+ G++ F+S+ + + ++D+ + G LE+A+ + M + +W ++G
Sbjct: 445 EMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC-DRDNVTWNTIIG 502
Query: 513 A 513
+
Sbjct: 503 S 503
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 409
AL +GK +H + + G ++ +GNA++ +Y KC + A F+ + EKDV +WN+M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 469
Y+ G + L F S+ + P++ T VLS C+ ++ G + SM K +
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLE 192
Query: 470 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 529
+S ++D+ + R+ +A+ + + +P W L G L E+A +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAG---LPEEAVLV 248
Query: 530 VFKM--EPHNSG--MYVLLSNLYAASGRWADA 557
+M E H +V + N Y G+ DA
Sbjct: 249 FERMRDEGHRPDHLAFVTVINTYIRLGKLKDA 280
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 210/676 (31%), Positives = 337/676 (49%), Gaps = 72/676 (10%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA---RRLFDSMPQK 81
N +++ Y + + + A +F+ + +D+VSWN ++TGY +N + + +LF M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 82 DVVSWNAMLSG---------------------------------------YAQNGYADEA 102
D++ L+G Y + G ++
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 103 REVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD---------SKSDWELISWNCLMG 153
+VF MP +N +W+ +++ Y GR+EEA ++F+ S SD+ + ++
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY---VFTAVLS 229
Query: 154 GFVKRKMLGAARKLFDKMHVRD-----VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 208
+G R++ + +++ V N +++ Y++ +++A +FD S ++
Sbjct: 230 SLAATIYVGLGRQI-HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSI 288
Query: 209 TWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAG---------YVQSNKMDMARE 259
TW+AMV+GY QNG EA F +M + G Y++ K +
Sbjct: 289 TWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGK-QLHSF 347
Query: 260 LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
L + R++ + ++ Y + G +A ARK FD + +RD W ++ISGY Q EEA
Sbjct: 348 LLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEA 407
Query: 320 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 379
L ++ +K G N T + L C+ +A LELGKQ+HG +K G+ +G+AL M
Sbjct: 408 LILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTM 467
Query: 380 YFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 439
Y KCGS+ + N VF KDVVSWN MI+G + +G G +AL +FE M G++PD++T
Sbjct: 468 YSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTF 527
Query: 440 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 499
V ++SACSH G ++RG YF M+ + P HY CM+DLL RAG+L+EA++ + +
Sbjct: 528 VNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESAN 587
Query: 500 FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGN 559
+ W LL A + HG ELG A E + + S YV LS +Y A GR D
Sbjct: 588 IDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVER 647
Query: 560 MRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSS 619
+ MR GV K G SW+E++N+ H F VGD HP + + + +M EG+V
Sbjct: 648 VWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFV-- 705
Query: 620 TKLVLHDVEEEEKEHM 635
T L VEEEE +
Sbjct: 706 TVLDSSFVEEEEGTQL 721
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 5/191 (2%)
Query: 351 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 410
L G+ +HGQ+++TG T N L+ Y KCG + +A+ +F I KDVVSWN++I G
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 411 YARHG---FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 467
Y+++G + +F M+ + P+ T+ G+ A S G + +++ S
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQA-HALVVKMS 148
Query: 468 VTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAA 527
T ++ + +AG +E+ + MP E +W ++ G E K
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 528 EMVFKMEPHNS 538
+ + + S
Sbjct: 208 NLFLREKEEGS 218
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 343 bits (880), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/551 (37%), Positives = 301/551 (54%), Gaps = 25/551 (4%)
Query: 68 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 127
+G AR+LFD PQ+D ++ LS Y E R Q P A+ +
Sbjct: 26 IGYARKLFDQRPQRD----DSFLSNSMIKAYL-ETR----QYPDSFAL----------YR 66
Query: 128 GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYA 187
+E C D+ + + ++ +C + V + L +++ D+ ++ YA
Sbjct: 67 DLRKETCFAPDNFT-FTTLTKSCSLSMCVYQG-LQLHSQIWRFGFCADMYVSTGVVDMYA 124
Query: 188 QDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-KNEISYNAMVA 246
+ G M A+N FD+ PH+ +WTA++SGY++ G LD A FDQMP K+ + YNAM+
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMD 184
Query: 247 GYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAI 306
G+V+S M AR LF+ M + V +W TMI GY DI ARKLFD MP+R+ VSW +
Sbjct: 185 GFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTM 244
Query: 307 ISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 365
I GY Q +E + +F E++ + T L +D AL LG+ H V +
Sbjct: 245 IGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKK 304
Query: 366 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 425
+ V A+L MY KCG I +A +F+ + EK V SWN MI GYA +G + AL +F
Sbjct: 305 LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFV 364
Query: 426 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 485
+M I KPDEITM+ V++AC+H GL++ G ++F+ M ++ + +HY CM+DLLGRA
Sbjct: 365 TM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRA 422
Query: 486 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLS 545
G L+EA+DL+ NMPFEP + L A + + E E+ + ++EP N G YVLL
Sbjct: 423 GSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLR 482
Query: 546 NLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLE 605
NLYAA RW D G +++ MR +K G S +E+ + +F GD HP + I+ L
Sbjct: 483 NLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLG 542
Query: 606 ELDLKMRREGY 616
+L + M E Y
Sbjct: 543 DLLMHMNEEKY 553
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 59/352 (16%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ-RDLVSWNVMLTGY 62
G A F+ MP RS VS+ A+ISGY+R LA LFD+MP +D+V +N M+ G+
Sbjct: 127 GKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGF 186
Query: 63 VRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA 122
V++ + ARRLFD M K V++W M+ GY D AR++F MP +N +SWN ++
Sbjct: 187 VKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIG 246
Query: 123 AYVHNGRIEEACRLFD--------------------SKSDWELISWNCLMGGFVKRKMLG 162
Y N + +E RLF + SD +S FV+RK L
Sbjct: 247 GYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLD 306
Query: 163 --------------------AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF--- 199
A+++FD+M + V SWN MI GYA +G+ A +LF
Sbjct: 307 KKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366
Query: 200 --DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-----KNEISYNAMVAGYVQSN 252
++ P D T A+++ G+++E R +F M + K E Y MV ++
Sbjct: 367 MIEEKP--DEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIE-HYGCMVDLLGRAG 423
Query: 253 KMDMARELFEAMP-SRNVSSWNTMITGYGQNGDIAQA----RKLFDMMPQRD 299
+ A +L MP N ++ ++ GQ DI +A +K ++ PQ D
Sbjct: 424 SLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQND 475
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 177/356 (49%), Gaps = 20/356 (5%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ-KDV 83
++ Y + + AR+ FD+MP R VSW +++GY+R L A +LFD MP KDV
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV 176
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW 143
V +NAM+ G+ ++G AR +F +M HK I+W ++ Y + I+ A +LFD+ +
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPER 236
Query: 144 ELISWNCLMGGFVKRKMLGAARKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAK-- 196
L+SWN ++GG+ + K +LF +M D V+ +++ + G +S +
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 197 NLFDQSPHQD--VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKM 254
+ F Q D V TA++ Y + G +++A+ FD+MP+K S+NAM+ GY +
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 255 DMARELFEAMPSRNVSSWNTM---ITGYGQNGDIAQARKLFDMMPQRDCVS----WAAII 307
A +LF M TM IT G + + RK F +M + + + ++
Sbjct: 357 RAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMV 416
Query: 308 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 363
+ G +EA ++ + + + S+F LS C +E ++I + V+
Sbjct: 417 DLLGRAGSLKEAEDLITNMPFEPNGIILSSF---LSACGQYKDIERAERILKKAVE 469
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 343 bits (879), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 203/647 (31%), Positives = 314/647 (48%), Gaps = 106/647 (16%)
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISW 117
Y + R LG AR+LFD MP+++++S+N+++SGY Q G+ ++A E+F + N ++
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 118 NGLLAAYVHNGRIEEACRL----------FDSKSDWELISWNCLMGGFVKRKMLGAARKL 167
G L G E C L + ++ N L+ + K L A L
Sbjct: 152 AGAL------GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSL 205
Query: 168 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ---------------------- 205
FD+ RD VSWN++ISGY + G + NL +
Sbjct: 206 FDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE 265
Query: 206 --------------------DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMV 245
D+ TA++ Y +NG L EA F MP KN ++YNAM+
Sbjct: 266 GFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMI 325
Query: 246 AGYVQSNK-------------MDMARELFEAMPS------------------RNVSSW-- 272
+G++Q ++ MDM R E PS R + +
Sbjct: 326 SGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALIC 385
Query: 273 -----------NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALN 321
+ +I Y G + F ++D SW ++I + Q E A +
Sbjct: 386 KNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFD 445
Query: 322 MFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYF 381
+F ++ T S +S CAD AAL G+QI G +K+G + V + + MY
Sbjct: 446 LFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYA 505
Query: 382 KCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVG 441
K G++ AN VF ++ DV +++ MI+ A+HG +AL +FESMKT G+KP++ +G
Sbjct: 506 KSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLG 565
Query: 442 VLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE 501
VL AC H GL+ +G +YF M DY + P+ KH+TC++DLLGR GRL +A++L+ + F+
Sbjct: 566 VLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQ 625
Query: 502 PPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMR 561
+W ALL + R++ ++ +G++ AE + ++EP SG YVLL N+Y SG + A +R
Sbjct: 626 DHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVR 685
Query: 562 SRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELD 608
MRD GV+K SW+ + N+ H F V D HP IY LE +D
Sbjct: 686 ELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMD 732
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 130/590 (22%), Positives = 236/590 (40%), Gaps = 115/590 (19%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
+ G D A+ +F+ R VS+N++ISGY+R +L KM RD ++ G
Sbjct: 195 KCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALG 253
Query: 62 YVRNR----------RLGDARRLFDSMP--QKDVVSWNAMLSGYAQNGYADEAREVFYQM 109
V G A + + + D+V A+L YA+NG EA ++F M
Sbjct: 254 SVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLM 313
Query: 110 PHKNAISWNGLLAAYVHNGRI-----EEACRLF---------DSKSDWELISWNCLMGGF 155
P KN +++N +++ ++ I EA +LF S S + ++ C
Sbjct: 314 PSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKAC----- 368
Query: 156 VKRKMLGAARKLFDKMHVRDVVSWN----------TMISGYAQDGDMSQAKNLFDQSPHQ 205
AA+ L + ++ N +I YA G F + Q
Sbjct: 369 ------SAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ 422
Query: 206 DVFTWTAMVSGYVQNGMLDEARTFFDQM------PQKNEIS--------YNAMVAG-YVQ 250
D+ +WT+M+ +VQN L+ A F Q+ P++ +S + A+ +G +Q
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQ 482
Query: 251 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 310
+ + F ++ + ++S Y ++G++ A ++F + D +++A+IS
Sbjct: 483 GYAIKSGIDAFTSVKTSSISM-------YAKSGNMPLANQVFIEVQNPDVATYSAMISSL 535
Query: 311 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 370
AQ G EALN+F +K G N+ F L C HG +V G +
Sbjct: 536 AQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC-----------HGGLVTQGLK--- 581
Query: 371 FVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 430
YF+C ND EK ++ R + ++ +
Sbjct: 582 ---------YFQC----MKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLIL------SS 622
Query: 431 GVKPDEITMVGVLSAC---SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAG- 486
G + +T +LS+C + + R E + + +S Y + ++ +G
Sbjct: 623 GFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPE-----ASGSYVLLHNIYNDSGV 677
Query: 487 --RLEEAQDLMRNMPFEP-PAASWGALLGASRIHGNTELGEKAAEMVFKM 533
EE ++LMR+ + PA SW + + +L +++M++ M
Sbjct: 678 NSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTM 727
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 7/209 (3%)
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
+L+ + T A ++ LGK HG ++K+ ++ N LL MY KC +G A
Sbjct: 44 ALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQ 103
Query: 392 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
+F+ + E++++S+N++I+GY + GF +QA+ +F + +K D+ T G L C
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCD 163
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
+D G E + + ++ +ID+ + G+L++A L E SW +L
Sbjct: 164 LDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSL- 220
Query: 512 GASRIHGNTELGEKAAEMVFKMEPHNSGM 540
I G +G + + H G+
Sbjct: 221 ----ISGYVRVGAAEEPLNLLAKMHRDGL 245
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 342 bits (876), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 179/453 (39%), Positives = 266/453 (58%), Gaps = 4/453 (0%)
Query: 164 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 223
A +F + +V + MI G+ G + +L+ + H V +++ ++ L
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDL 139
Query: 224 DEARTFFDQMPQKNEISYNA----MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGY 279
R Q+ + S + M+ Y +S ++ A+++F+ MP R+ + MI Y
Sbjct: 140 KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCY 199
Query: 280 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 339
+ G I +A +LF + +D V W A+I G + +AL +F E++ + S N T
Sbjct: 200 SECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAV 259
Query: 340 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 399
C LS C+D+ ALELG+ +H V E FVGNAL+ MY +CG I EA VF + +K
Sbjct: 260 CVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDK 319
Query: 400 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF 459
DV+S+NTMI+G A HG +A+ F M G +P+++T+V +L+ACSH GL+D G E F
Sbjct: 320 DVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVF 379
Query: 460 YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 519
SM + ++V P +HY C++DLLGR GRLEEA + N+P EP G LL A +IHGN
Sbjct: 380 NSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN 439
Query: 520 TELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 579
ELGEK A+ +F+ E +SG YVLLSNLYA+SG+W ++ +R MRD G++K G S +E
Sbjct: 440 MELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499
Query: 580 VQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR 612
V N+IH+F VGD HP K+ IY L+EL+ +R
Sbjct: 500 VDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 189/445 (42%), Gaps = 83/445 (18%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT------ 60
D A VF+ + + Y AMI G++ + R + L+ +M ++ N ++T
Sbjct: 78 DYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC 137
Query: 61 ---------------GYVRNRRLG--------------DARRLFDSMPQKDVVSWNAMLS 91
G+ +R +G +A+++FD MP +D V+ M++
Sbjct: 138 DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMIN 197
Query: 92 GYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWN-- 149
Y++ G+ EA E+F + K+ + W ++ V N + +A LF + E +S N
Sbjct: 198 CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELF-REMQMENVSANEF 256
Query: 150 ---CLMGGFVKRKMLGAARKLF-----DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 201
C++ L R + +M + + V N +I+ Y++ GD+++A+ +F
Sbjct: 257 TAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVG-NALINMYSRCGDINEARRVFRV 315
Query: 202 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMA 257
+DV ++ M+SG +G EA F M + N+++ A++ +D+
Sbjct: 316 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 375
Query: 258 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 317
E+F +M +++F++ PQ + + I+ + G E
Sbjct: 376 LEVFNSM------------------------KRVFNVEPQIE--HYGCIVDLLGRVGRLE 409
Query: 318 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT-GYETGCFVGNAL 376
EA I + + + T LS C +ELG++I ++ ++ ++G +V L
Sbjct: 410 EAYRFIENIPIEPDHIMLGTL---LSACKIHGNMELGEKIAKRLFESENPDSGTYV--LL 464
Query: 377 LGMYFKCGSIGEANDVFEGIEEKDV 401
+Y G E+ ++ E + + +
Sbjct: 465 SNLYASSGKWKESTEIRESMRDSGI 489
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 130/296 (43%), Gaps = 34/296 (11%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
++G +A ++F+ MP R V+ MI+ Y A +LF + +D V W M+ G
Sbjct: 170 KSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDG 229
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWN-----AMLSGYAQNGYADEAREVF-----YQMPH 111
VRN+ + A LF M Q + VS N +LS + G + R V +M
Sbjct: 230 LVRNKEMNKALELFREM-QMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMEL 288
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA------- 164
N + N L+ Y G I EA R+F D ++IS+N ++ G M GA+
Sbjct: 289 SNFVG-NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLA---MHGASVEAINEF 344
Query: 165 RKLFDKMHVRDVVSWNTMISGYAQDGDM-------SQAKNLFDQSPHQDVFTWTAMVSGY 217
R + ++ + V+ +++ + G + + K +F+ P + + + G
Sbjct: 345 RDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGR 404
Query: 218 VQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN 273
V G L+EA F + +P + + + M+ + + K+ EL E + R S N
Sbjct: 405 V--GRLEEAYRFIENIPIEPD---HIMLGTLLSACKIHGNMELGEKIAKRLFESEN 455
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 105/266 (39%), Gaps = 44/266 (16%)
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
R T L +C +IA + IH ++++T ++ FV L+ + S+ A DVF
Sbjct: 29 RKTLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS 85
Query: 395 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS------- 447
+ +V + MI G+ G + ++ M V PD + VL AC
Sbjct: 86 YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREI 145
Query: 448 HAGLIDRG-----------------TEYFYSMNKDYSVTPSSKHY--TCMIDLLGRAGRL 488
HA ++ G + + K + P H T MI+ G +
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 489 EEAQDLMRNMPFEPPAASWGALL-GASRIHGNTELGEKAAEMVFKMEPHN--SGMYVLLS 545
+EA +L +++ + W A++ G R N E+ KA E+ +M+ N + + +
Sbjct: 206 KEALELFQDVKIK-DTVCWTAMIDGLVR---NKEMN-KALELFREMQMENVSANEFTAVC 260
Query: 546 NLYAAS-------GRWADAGNMRSRM 564
L A S GRW + RM
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRM 286
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 341 bits (875), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 160/373 (42%), Positives = 249/373 (66%), Gaps = 2/373 (0%)
Query: 244 MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP--QRDCV 301
++ Y + AR++F+ M ++V+ WN ++ GYG+ G++ +AR L +MMP R+ V
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 302 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 361
SW +ISGYA++G EA+ +F + + + T LS CAD+ +LELG++I V
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 362 VKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 421
G + NA++ MY K G+I +A DVFE + E++VV+W T+IAG A HG G +AL
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 422 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL 481
+F M GV+P+++T + +LSACSH G +D G F SM Y + P+ +HY CMIDL
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
Query: 482 LGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMY 541
LGRAG+L EA +++++MPF+ AA WG+LL AS +H + ELGE+A + K+EP+NSG Y
Sbjct: 397 LGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNY 456
Query: 542 VLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIY 601
+LL+NLY+ GRW ++ MR+ M+ +GV+K+ G S +EV+N+++KF GD HP+ +RI+
Sbjct: 457 MLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIH 516
Query: 602 AFLEELDLKMRRE 614
L+E+DL+++ +
Sbjct: 517 EILQEMDLQIQSK 529
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 146/285 (51%), Gaps = 27/285 (9%)
Query: 68 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH--KNAISWNGLLAAYV 125
LGDAR++FD M KDV WNA+L+GY + G DEAR + MP +N +SW +++ Y
Sbjct: 167 LGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYA 226
Query: 126 HNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKL---FDKMHVRDVVS 178
+GR EA +F + + ++ ++ L ++ D + VS
Sbjct: 227 KSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVS 286
Query: 179 W-NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-- 235
N +I YA+ G++++A ++F+ ++V TWT +++G +G EA F++M +
Sbjct: 287 LNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG 346
Query: 236 --KNEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQA 288
N++++ A+++ +D+ + LF +M S+ N+ + MI G+ G + +A
Sbjct: 347 VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREA 406
Query: 289 RKLFDMMP-QRDCVSWAAIISGYAQTGHY-----EEALNMFIEIK 327
++ MP + + W ++++ A H+ E AL+ I+++
Sbjct: 407 DEVIKSMPFKANAAIWGSLLA--ASNVHHDLELGERALSELIKLE 449
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 56/291 (19%)
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP--QKNEI 239
+I Y G + A+ +FD+ +DV W A+++GY + G +DEAR+ + MP +NE+
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 240 SYNAMVAGYVQSNKMDMARELFEAMP---------------------------------- 265
S+ +++GY +S + A E+F+ M
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 266 -----SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 320
+R VS N +I Y ++G+I +A +F+ + +R+ V+W II+G A GH EAL
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 321 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV-VKTGYET-----GCFVGN 374
MF + + G N TF LS C+ + ++LGK++ + K G GC +
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMID- 395
Query: 375 ALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHG---FGKQAL 421
LLG + G + EA++V + + K + W +++A H G++AL
Sbjct: 396 -LLG---RAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 154/317 (48%), Gaps = 25/317 (7%)
Query: 27 MISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP--QKDVV 84
+I Y AR +FD+M +D+ WN +L GY + + +AR L + MP ++ V
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRI---EEACRLF 137
SW ++SGYA++G A EA EVF +M +N ++ +L+A G + E C
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 138 DSKSDWELISW-NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 196
D + +S N ++ + K + A +F+ ++ R+VV+W T+I+G A G ++A
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 197 NLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI-----SYNAMVAG 247
+F++ V T+ A++S G +D + F+ M K I Y M+
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
Query: 248 YVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARK----LFDMMPQRDCVS 302
++ K+ A E+ ++MP + N + W +++ + D+ + L + P + +
Sbjct: 397 LGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPN-NSGN 455
Query: 303 WAAIISGYAQTGHYEEA 319
+ + + Y+ G ++E+
Sbjct: 456 YMLLANLYSNLGRWDES 472
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 50/270 (18%)
Query: 337 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 396
TF L ++ + G+QIHGQVV G+++ V L+ MYF CG +G+A +F+ +
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 397 EEKDV---------------------------------VSWNTMIAGYARHGFGKQALMV 423
KDV VSW +I+GYA+ G +A+ V
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 424 FESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 483
F+ M V+PDE+T++ VLSAC+ G ++ G E S + + +ID+
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELG-ERICSYVDHRGMNRAVSLNNAVIDMYA 296
Query: 484 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM-----EPHNS 538
++G + +A D+ + E +W ++ HG+ G +A M +M P++
Sbjct: 297 KSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGH---GAEALAMFNRMVKAGVRPNDV 352
Query: 539 GMYVLLSNLYAASGRWADAG-----NMRSR 563
+LS W D G +MRS+
Sbjct: 353 TFIAILSACSHVG--WVDLGKRLFNSMRSK 380
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 298/547 (54%), Gaps = 19/547 (3%)
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
DV A + + + D A +VF +MP ++A +WN +L+ + +G ++A LF
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFDKMH---VR-----DVVSWNTMISGYAQDGDMS 193
E+ + + ++ + KL + MH +R V NT IS Y + GD+
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 194 QAKNLFDQSPHQD--VFTWTAMVSGYVQNGMLDEARTFFDQMPQ---KNEISYNAMVAGY 248
AK +F+ D V +W +M Y G +A + M + K ++S +A
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 249 VQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 303
Q+ + L + +++ + NT I+ Y ++ D AR LFD+M R CVSW
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSW 325
Query: 304 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 363
+ISGYA+ G +EAL +F + + GE + T +S C +LE GK I +
Sbjct: 326 TVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADI 385
Query: 364 TGYE-TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALM 422
G + + NAL+ MY KCGSI EA D+F+ EK VV+W TMIAGYA +G +AL
Sbjct: 386 YGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALK 445
Query: 423 VFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLL 482
+F M + KP+ IT + VL AC+H+G +++G EYF+ M + Y+++P HY+CM+DLL
Sbjct: 446 LFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLL 505
Query: 483 GRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYV 542
GR G+LEEA +L+RNM +P A WGALL A +IH N ++ E+AAE +F +EP + YV
Sbjct: 506 GRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYV 565
Query: 543 LLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYA 602
++N+YAA+G W +RS M+ ++K G S ++V K H FTVG+ H E + IY
Sbjct: 566 EMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYF 625
Query: 603 FLEELDL 609
L L L
Sbjct: 626 TLNGLSL 632
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 173/375 (46%), Gaps = 27/375 (7%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNR 66
D A +VF MP R + ++NAM+SG+ ++ A LF +M ++ +V + +++
Sbjct: 104 DYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSA 163
Query: 67 RLGDARRLFDSM--------PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH--KNAIS 116
+ +L ++M V N +S Y + G D A+ VF + + +S
Sbjct: 164 SFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVS 223
Query: 117 WNGLLAAYVHNGRIEEA----CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD-KM 171
WN + AY G +A C + + +L ++ L + L R + +
Sbjct: 224 WNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAI 283
Query: 172 HV---RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEART 228
H+ +D+ + NT IS Y++ D A+ LFD + +WT M+SGY + G +DEA
Sbjct: 284 HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 229 FFDQMPQKNE----ISYNAMVA-----GYVQSNKMDMARELFEAMPSRNVSSWNTMITGY 279
F M + E ++ ++++ G +++ K AR NV N +I Y
Sbjct: 344 LFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMY 403
Query: 280 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 339
+ G I +AR +FD P++ V+W +I+GYA G + EAL +F ++ N TF
Sbjct: 404 SKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFL 463
Query: 340 CALSTCADIAALELG 354
L CA +LE G
Sbjct: 464 AVLQACAHSGSLEKG 478
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 130/274 (47%), Gaps = 29/274 (10%)
Query: 50 RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM 109
+D+ + N ++ Y ++ AR LFD M + VSW M+SGYA+ G DEA +F+ M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 110 ----PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW------ELISWNCLMGGFVKRK 159
+ ++ L++ G +E + D+++D ++ N L+ + K
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 160 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF------DQSPHQDVFTWTAM 213
+ AR +FD + VV+W TMI+GYA +G +A LF D P+ T+ A+
Sbjct: 408 SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNH--ITFLAV 465
Query: 214 VSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR- 267
+ +G L++ +F M Q IS Y+ MV + K++ A EL M ++
Sbjct: 466 LQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKP 525
Query: 268 NVSSWNTMITG--YGQNGDIAQ--ARKLFDMMPQ 297
+ W ++ +N IA+ A LF++ PQ
Sbjct: 526 DAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQ 559
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 2/231 (0%)
Query: 289 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI 348
R+L+ + +W I E+L +F E+KR G N TF CA +
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 349 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 408
A + + +H ++K+ + + FVG A + M+ KC S+ A VFE + E+D +WN M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 409 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 468
+G+ + G +A +F M+ + PD +T++ ++ + S + + E +++ V
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSL-KLLEAMHAVGIRLGV 184
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF-EPPAASWGALLGASRIHG 518
I G+ G L+ A+ + + + SW ++ A + G
Sbjct: 185 DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV- 83
NA+I Y + ARD+FD P++ +V+W M+ GY N +A +LF M D
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK 456
Query: 84 ---VSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS-----WNGLLAAYVHNGRIEEACR 135
+++ A+L A +G ++ E F+ M IS ++ ++ G++EEA
Sbjct: 457 PNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 516
Query: 136 LFDSKS 141
L + S
Sbjct: 517 LIRNMS 522
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 207/629 (32%), Positives = 323/629 (51%), Gaps = 34/629 (5%)
Query: 18 RRSSVSYNAMISGYLRNARFSLARD----LFDKMPQRDLVSWNVMLTGYVRNR-----RL 68
R +++N+ S L N SL L K Q ++ ++L + +R L
Sbjct: 38 RDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCAL 97
Query: 69 GDAR------RLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA 122
++R ++ + ++ SWN + G++++ E+ ++ QM
Sbjct: 98 SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHF 157
Query: 123 AYVHNGRIEEACRLFDS---------KSDWELISW--NCLMGGFVKRKMLGAARKLFDKM 171
Y ++ RL K EL+S N + F + ARK+FD+
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 172 HVRDVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
VRD+VSWN +I+GY + G+ +A K + + D T +VS G L+ +
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 228 TFFDQMPQ---KNEISY-NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNG 283
F++ + + + I NA++ + + + AR +F+ + R + SW TMI+GY + G
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 284 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 343
+ +RKLFD M ++D V W A+I G Q ++AL +F E++ + T LS
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 344 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 403
C+ + AL++G IH + K +G +L+ MY KCG+I EA VF GI+ ++ ++
Sbjct: 398 ACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT 457
Query: 404 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMN 463
+ +I G A HG A+ F M G+ PDEIT +G+LSAC H G+I G +YF M
Sbjct: 458 YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
Query: 464 KDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 523
+++ P KHY+ M+DLLGRAG LEEA LM +MP E AA WGALL R+HGN ELG
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELG 577
Query: 524 EKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNK 583
EKAA+ + +++P +SG+YVLL +Y + W DA R M + GV+K+ G S +EV
Sbjct: 578 EKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGI 637
Query: 584 IHKFTVGDCFHPEKDRIYAFLEELDLKMR 612
+ +F V D PE ++IY L L MR
Sbjct: 638 VCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 205/467 (43%), Gaps = 84/467 (17%)
Query: 109 MPH--KNAISWNGLLAAYVHNGRIE--EACRLFD--SKSDWELISWNCLMGGFVKRKM-- 160
+PH I+WN + +HN + E C+L + ++I ++ F ++
Sbjct: 34 LPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIA 93
Query: 161 ---------LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ-------SPH 204
L + K+ + ++ SWN I G+++ + ++ L+ Q
Sbjct: 94 FCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESR 153
Query: 205 QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM 264
D FT+ + F S M+ G+V ++++ +
Sbjct: 154 PDHFTYPVL----------------FKVCADLRLSSLGHMILGHVLKLRLELVSHVH--- 194
Query: 265 PSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 324
N I + GD+ ARK+FD P RD VSW +I+GY + G E+A+ ++
Sbjct: 195 --------NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 325 EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 384
++ +G + T +S+C+ + L GK+ + V + G + NAL+ M+ KCG
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 385 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGF---------------------------- 416
I EA +F+ +E++ +VSW TMI+GYAR G
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Query: 417 ---GKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSK 473
G+ AL +F+ M+T KPDEITM+ LSACS G +D G + + + YS++ +
Sbjct: 367 AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI-WIHRYIEKYSLSLNVA 425
Query: 474 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 520
T ++D+ + G + EA + + + ++ A++G +HG+
Sbjct: 426 LGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDA 471
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 169/376 (44%), Gaps = 67/376 (17%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G ++A +VF+ P R VS+N +I+GY + A ++ M + +V + G V
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 64 RN-RRLGD--------------------------------------ARRLFDSMPQKDVV 84
+ LGD ARR+FD++ ++ +V
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF------D 138
SW M+SGYA+ G D +R++F M K+ + WN ++ V R ++A LF +
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 139 SKSDWELISWNCLMGGFVKRKMLGA------ARKLFDKMHVRDVVSWNT-MISGYAQDGD 191
+K D E+ +CL LGA + +K + V+ T ++ YA+ G+
Sbjct: 385 TKPD-EITMIHCLSAC----SQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 192 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAG 247
+S+A ++F ++ T+TA++ G +G A ++F++M +EI++ +++
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Query: 248 YVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCV 301
+ R+ F M SR + ++ M+ G+ G + +A +L + MP + D
Sbjct: 500 CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAA 559
Query: 302 SWAAIISGYAQTGHYE 317
W A++ G G+ E
Sbjct: 560 VWGALLFGCRMHGNVE 575
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 46/334 (13%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G A R+F+ + +R+ VS+ MISGY R ++R LFD M ++D+V WN M+ G V
Sbjct: 306 GDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSV 365
Query: 64 RNRRLGDARRLFDSM----PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG 119
+ +R DA LF M + D ++ LS +Q G D + ++ K ++S N
Sbjct: 366 QAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWI-HRYIEKYSLSLNV 424
Query: 120 LLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 179
L L+ + K + A +F + R+ +++
Sbjct: 425 ALGT--------------------------SLVDMYAKCGNISEALSVFHGIQTRNSLTY 458
Query: 180 NTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
+I G A GD S A + F D D T+ ++S GM+ R +F QM
Sbjct: 459 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKS 518
Query: 236 KNEIS-----YNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGDI---- 285
+ ++ Y+ MV ++ ++ A L E+MP + + W ++ G +G++
Sbjct: 519 RFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGE 578
Query: 286 AQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
A+KL ++ P D + + Y + +E+A
Sbjct: 579 KAAKKLLELDPS-DSGIYVLLDGMYGEANMWEDA 611
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 335 bits (858), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 224/759 (29%), Positives = 357/759 (47%), Gaps = 153/759 (20%)
Query: 1 MRNGHCDS-----ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----- 50
M NG+ S A FN MP R VS+N+M+SGYL+N + ++F M +
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 51 ----------------------------------DLVSWNVMLTGYVRNRRLGDARRLFD 76
D+V+ + +L Y + +R ++ R+F
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 239
Query: 77 SMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL 136
+P+K+ VSW+A+++G QN A + F +M NA + A+ + + RL
Sbjct: 240 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 299
Query: 137 FDS------KSDWEL--ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQ 188
KSD+ I + + K + A+ LFD + S+N MI+GY+Q
Sbjct: 300 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 189 DGDMSQAKNLF----------DQSPHQDVFTWTAMVSGY--------------------V 218
+ +A LF D+ VF A+V G V
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 219 QNGMLD---------EARTFFDQMPQKNEISYNAMVAGYVQSNK---------------- 253
N +D EA FD+M +++ +S+NA++A + Q+ K
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 254 ----------------------MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKL 291
M++ + ++ + N S ++I Y + G I +A K+
Sbjct: 480 EPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Query: 292 FDMMPQRD--------------------CVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 331
QR CVSW +IISGY E+A +F + G
Sbjct: 540 HSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI 599
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
+ ++ T++ L TCA++A+ LGKQIH QV+K ++ ++ + L+ MY KCG + ++
Sbjct: 600 TPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRL 659
Query: 392 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
+FE +D V+WN MI GYA HG G++A+ +FE M +KP+ +T + +L AC+H GL
Sbjct: 660 MFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGL 719
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
ID+G EYFY M +DY + P HY+ M+D+LG++G+++ A +L+R MPFE W LL
Sbjct: 720 IDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779
Query: 512 GASRIH-GNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
G IH N E+ E+A + +++P +S Y LLSN+YA +G W ++R MR ++
Sbjct: 780 GVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLK 839
Query: 571 KVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDL 609
K G SWVE+++++H F VGD HP + IY EEL L
Sbjct: 840 KEPGCSWVELKDELHVFLVGDKAHPRWEEIY---EELGL 875
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 167/628 (26%), Positives = 263/628 (41%), Gaps = 116/628 (18%)
Query: 18 RRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDS 77
R ++ N ++ Y + F A +FDKMP RD+VSWN M+ GY ++ + A F+
Sbjct: 80 RPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNM 139
Query: 78 MPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK------------------------- 112
MP +DVVSWN+MLSGY QNG + ++ EVF M +
Sbjct: 140 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLG 199
Query: 113 --------------NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKR 158
+ ++ + LL Y R E+ R+F + +SW+ ++ G V+
Sbjct: 200 MQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQN 259
Query: 159 KMLGAARKLFDKMH-VRDVVS---WNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTW 210
+L A K F +M V VS + +++ A ++ L + D
Sbjct: 260 NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVR 319
Query: 211 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR--- 267
TA + Y + + +A+ FD N SYNAM+ GY Q A LF + S
Sbjct: 320 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 379
Query: 268 ------------------------------------NVSSWNTMITGYGQNGDIAQARKL 291
+V N I YG+ +A+A ++
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 439
Query: 292 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
FD M +RD VSW AII+ + Q G E L +F+ + R + TF L C +L
Sbjct: 440 FDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSL 498
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV-------------FEGIE- 397
G +IH +VK+G + VG +L+ MY KCG I EA + E +E
Sbjct: 499 GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEK 558
Query: 398 ------EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
++ VSWN++I+GY + A M+F M +G+ PD+ T VL C++
Sbjct: 559 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 618
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTC--MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGA 509
G + + K S Y C ++D+ + G L +++ LM +W A
Sbjct: 619 AGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNA 674
Query: 510 LLGASRIHGNTELGEKAAEMVFKMEPHN 537
++ HG GE+A ++ +M N
Sbjct: 675 MICGYAHHGK---GEEAIQLFERMILEN 699
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 39/228 (17%)
Query: 319 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 378
+ + F + S++ + FS CA ALELGKQ H ++ +G+ FV N LL
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 379 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYAR------------------------- 413
+Y A+ VF+ + +DVVSWN MI GY++
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 414 ------HGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE---YFYSMNK 464
+G +++ VF M G++ D T +L CS G + +
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 465 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
D V +S ++D+ + R E+ + + +P E + SW A++
Sbjct: 212 DTDVVAAS----ALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIA 254
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/562 (33%), Positives = 308/562 (54%), Gaps = 25/562 (4%)
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL------ 136
+V WN++LS YA+ G +A ++F +MP ++ IS N + ++ N E L
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 137 ---FDSKSDWELISWNCLMGGF-VKRKMLGAARKL--FDKMHVRDVVSWNTMISGYAQDG 190
FD + ++S C F + KM+ A L +DK ++ N +I+ Y + G
Sbjct: 150 SGGFDHATLTIVLSV-CDTPEFCLVTKMIHALAILSGYDK----EISVGNKLITSYFKCG 204
Query: 191 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVA 246
+ +FD H++V T TA++SG ++N + ++ F M + N ++Y + +A
Sbjct: 205 CSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALA 264
Query: 247 GYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGDIAQARKLFDMMPQRDCVS 302
S ++ +++ + + S + ++ Y + G I A +F+ + D VS
Sbjct: 265 ACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVS 324
Query: 303 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 362
I+ G AQ G EEA+ FI + + G ++ + S L +L LGKQ+H V+
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVI 384
Query: 363 KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALM 422
K + FV N L+ MY KCG + ++ VF + +++ VSWN+MIA +ARHG G AL
Sbjct: 385 KRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALK 444
Query: 423 VFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLL 482
++E M T+ VKP ++T + +L ACSH GLID+G E M + + + P ++HYTC+ID+L
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDML 504
Query: 483 GRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYV 542
GRAG L+EA+ + ++P +P W ALLGA HG+TE+GE AAE +F+ P +S ++
Sbjct: 505 GRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHI 564
Query: 543 LLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYA 602
L++N+Y++ G+W + RM+ +GV K TG S +E+++K H F V D HP+ + IY
Sbjct: 565 LIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYD 624
Query: 603 FLEELDLKMRREGYVSSTKLVL 624
L L M EGY + +L
Sbjct: 625 VLSGLFPVMVDEGYRPDKRFIL 646
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 185/391 (47%), Gaps = 16/391 (4%)
Query: 171 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 230
+H +V WN+++S YA+ G + A LFD+ P +DV + + G+++N +
Sbjct: 85 IHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLL 144
Query: 231 DQMPQKNEISYNAM--VAGYVQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQNG 283
+M + + V + + + ++ A+ + +S N +IT Y + G
Sbjct: 145 KRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCG 204
Query: 284 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 343
R +FD M R+ ++ A+ISG + +E+ L +F ++R N T+ AL+
Sbjct: 205 CSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALA 264
Query: 344 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 403
C+ + G+QIH + K G E+ + +AL+ MY KCGSI +A +FE E D VS
Sbjct: 265 ACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVS 324
Query: 404 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT---EYFY 460
++ G A++G ++A+ F M GV+ D V+SA ID + +
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQAGVEID----ANVVSAVLGVSFIDNSLGLGKQLH 380
Query: 461 SMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 520
S+ + ++ +I++ + G L ++Q + R MP + SW +++ A HG+
Sbjct: 381 SLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHG 439
Query: 521 ELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 551
K E + +E + + LS L+A S
Sbjct: 440 LAALKLYEEMTTLEVKPTDV-TFLSLLHACS 469
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 152/369 (41%), Gaps = 64/369 (17%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRL 68
AL + + + SV N +I+ Y + R +FD M R++++ +++G + N
Sbjct: 179 ALAILSGYDKEISVG-NKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELH 237
Query: 69 GDARRLFDSM----------------------------PQKDVVSW-----------NAM 89
D RLF M Q + W +A+
Sbjct: 238 EDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESAL 297
Query: 90 LSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF------DSKSDW 143
+ Y++ G ++A +F + +S +L NG EEA + F + D
Sbjct: 298 MDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA 357
Query: 144 ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT-----MISGYAQDGDMSQAKNL 198
++S ++G LG ++L + ++ S NT +I+ Y++ GD++ ++ +
Sbjct: 358 NVVS--AVLGVSFIDNSLGLGKQL-HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTV 414
Query: 199 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKM 254
F + P ++ +W +M++ + ++G A +++M + ++++ +++ +
Sbjct: 415 FRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLI 474
Query: 255 DMARELFEAMPSRN-----VSSWNTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIIS 308
D REL M + + +I G+ G + +A+ D +P + DC W A++
Sbjct: 475 DKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLG 534
Query: 309 GYAQTGHYE 317
+ G E
Sbjct: 535 ACSFHGDTE 543
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----H 111
N ++ Y + L D++ +F MP+++ VSWN+M++ +A++G+ A +++ +M
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS-----WNCLMGGFVKRKMLGAARK 166
+++ LL A H G I++ L + + I + C++ + +L A+
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 167 LFDKMHVR-DVVSWNTMISGYAQDGDMS----QAKNLFDQSP 203
D + ++ D W ++ + GD A+ LF +P
Sbjct: 516 FIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAP 557
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 311/616 (50%), Gaps = 56/616 (9%)
Query: 52 LVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
LV + ++ R+ AR++FD MP+ D V+WN ML+ Y++ G EA +F Q+
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 112 KNA----ISWNGLLAAYVHNGRIEEACRL----FDSKSDWELISWNCLMGGFVKRKMLGA 163
+A S+ +L+ G ++ ++ S L N L+ + K +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 164 ARKLFDKMHV--RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 221
A K+F M R+ V+W +++ Y A ++F + P + F W M+SG+ G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 222 MLDEARTFFDQMPQK--------------------NEISYNAMVAGYVQSN--------- 252
L+ + F +M + + + Y MV + N
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 253 ------------KMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 300
+ D REL E++ SWN++I + G+ +A ++F + P+++
Sbjct: 244 NSVLSFYTKLGSRDDAMREL-ESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNI 302
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 360
V+W +I+GY + G E+AL F+E+ + G + + L C+ +A L GK IHG
Sbjct: 303 VTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGC 362
Query: 361 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 420
++ G++ +VGNAL+ +Y KCG I EA+ F I KD+VSWNTM+ + HG QA
Sbjct: 363 LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQA 422
Query: 421 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 480
L ++++M G+KPD +T +G+L+ CSH+GL++ G F SM KDY + H TCMID
Sbjct: 423 LKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMID 482
Query: 481 LLGRAGRLEEAQDLMRN----MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 536
+ GR G L EA+DL + +SW LLGA H +TELG + ++++ EP
Sbjct: 483 MFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPS 542
Query: 537 NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPE 596
+VLLSNLY ++GRW + ++R M + G++K G SW+EV N++ F VGD HP
Sbjct: 543 EEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPR 602
Query: 597 KDRIYAFLEELDLKMR 612
+ + L L +MR
Sbjct: 603 LEELSETLNCLQHEMR 618
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 160/348 (45%), Gaps = 29/348 (8%)
Query: 8 SALRVFNTM--PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRN 65
SA +VF M R+ V++ +++ Y+ +F A D+F +MP+R +WN+M++G+
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 66 RRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH----KNAISW---- 117
+L LF M + + S AD + V+ +M H KN S
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEA 242
Query: 118 -NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV--- 173
N +L+ Y G ++A R +S +SWN ++ +K +G K + H+
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK---IGETEKALEVFHLAPE 299
Query: 174 RDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTF 229
+++V+W TMI+GY ++GD QA F D F + A++ +L +
Sbjct: 300 KNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMI 359
Query: 230 FDQMPQKNEISY----NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDI 285
+ Y NA+V Y + + A F + ++++ SWNTM+ +G +G
Sbjct: 360 HGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLA 419
Query: 286 AQARKLFDMM----PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
QA KL+D M + D V++ +++ + +G EE +F + +D
Sbjct: 420 DQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKD 467
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV------------- 53
++AL VF MP+R + ++N MISG+ + LF +M + +
Sbjct: 155 EAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNAC 214
Query: 54 --------------------SW-------NVMLTGYVRNRRLGDARRLFDSMPQKDVVSW 86
W N +L+ Y + DA R +S+ VSW
Sbjct: 215 SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 87 NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSD 142
N+++ + G ++A EVF+ P KN ++W ++ Y NG E+A R F S D
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 143 WELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW----NTMISGYAQDGDMSQAKNL 198
+ ++ ++ +LG + + + + N +++ YA+ GD+ +A
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRA 394
Query: 199 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKM 254
F ++D+ +W M+ + +G+ D+A +D M + + +++ ++ S +
Sbjct: 395 FGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLV 454
Query: 255 DMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKL 291
+ +FE+M V MI +G+ G +A+A+ L
Sbjct: 455 EEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 57/379 (15%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G D A+R ++ + VS+N++I ++ A ++F P++++V+W M+TGY
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 64 RNRRLGDARRLFDSMPQKDVVS----WNAML---SGYAQNGYADEAREVFYQMPHKN-AI 115
RN A R F M + V S + A+L SG A G+ + A
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 175
N L+ Y G I+EA R F ++ +L+SWN ++ F + A KL+D M
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASG 433
Query: 176 VVSWNTMI---------SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA 226
+ N SG ++G M + D +V T M+ + + G L EA
Sbjct: 434 IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEA 493
Query: 227 RTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIA 286
+ +Y+++V S N SSW T++ +
Sbjct: 494 KDL--------ATTYSSLVT------------------DSSNNSSWETLLGACSTHWHTE 527
Query: 287 QAR---KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 343
R K+ + + +S+ + + Y TG ++E GE + R +
Sbjct: 528 LGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKE-----------GEDVRREMVERGMK 576
Query: 344 TCADIAALELGKQIHGQVV 362
+ +E+G Q+ VV
Sbjct: 577 KTPGCSWIEVGNQVSTFVV 595
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 48/215 (22%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVS------ 54
M+ G + AL VF+ P ++ V++ MI+GY RN A F +M + + S
Sbjct: 282 MKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYG 341
Query: 55 ---------------------------------WNVMLTGYVRNRRLGDARRLFDSMPQK 81
N ++ Y + + +A R F + K
Sbjct: 342 AVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK 401
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLF 137
D+VSWN ML + +G AD+A +++ M + +++ GLL H+G +EE C +F
Sbjct: 402 DLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIF 461
Query: 138 DS-----KSDWELISWNCLMGGFVKRKMLGAARKL 167
+S + E+ C++ F + L A+ L
Sbjct: 462 ESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 221/674 (32%), Positives = 353/674 (52%), Gaps = 69/674 (10%)
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSK 140
++V+ N +++ YA+ G AR+VF MP +N +SW L+ YV G +E LF S
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS- 152
Query: 141 SDWELISWNCLMGGFVKRKMLGAAR----------KLFDKMHVRDVVSWNTMISGYAQ-- 188
++S +C F +L + R L +H V+ N +IS Y +
Sbjct: 153 ----MLS-HCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVA-NAVISMYGRCH 206
Query: 189 DGDMS-QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAG 247
DG + +A +F+ +++ TW +M++ + + +A F +M G
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDG--------VG 258
Query: 248 YVQSNKMDMARELFEA--MPSRNVSSWN------TMITGYGQNGDIAQA----------- 288
+ ++ +++ L+++ + VS T+ +G ++A A
Sbjct: 259 FDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLED 318
Query: 289 ----RKLF-DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 343
KLF +M RD V+W II+ +A E A+++F +++++ S + TFS L
Sbjct: 319 YTDCYKLFMEMSHCRDIVAWNGIITAFA-VYDPERAIHLFGQLRQEKLSPDWYTFSSVLK 377
Query: 344 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 403
CA + IH QV+K G+ + N+L+ Y KCGS+ VF+ ++ +DVVS
Sbjct: 378 ACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS 437
Query: 404 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMN 463
WN+M+ Y+ HG L VF+ M + PD T + +LSACSHAG ++ G F SM
Sbjct: 438 WNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMF 494
Query: 464 KDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 523
+ P HY C+ID+L RA R EA+++++ MP +P A W ALLG+ R HGNT LG
Sbjct: 495 EKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG 554
Query: 524 EKAAEMVFKM-EPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQN 582
+ AA+ + ++ EP NS Y+ +SN+Y A G + +A M V+K SW E+ N
Sbjct: 555 KLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGN 614
Query: 583 KIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHM-LKYHSE 641
K+H+F G P+K+ +Y L+ L ++ GYV + D+E+EE+E L +HSE
Sbjct: 615 KVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSE 674
Query: 642 KLAVAFGILTIPAGRP--------IRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRF 693
KLA+AF ++ GR I+++KN R+C DCHN +K SK++G+ I++RDS+RF
Sbjct: 675 KLALAFAVME---GRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRF 731
Query: 694 HHFNEGICSCGDYW 707
HHF + CSC DYW
Sbjct: 732 HHFKDSSCSCNDYW 745
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 8/183 (4%)
Query: 266 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 325
S+NV N +I Y + G+I AR++FD MP+R+ VSW A+I+GY Q G+ +E +F
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC-- 383
+ N T S L++C E GKQ+HG +K G +V NA++ MY +C
Sbjct: 153 MLSHCFP-NEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHD 207
Query: 384 -GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 442
+ EA VFE I+ K++V+WN+MIA + GK+A+ VF M + GV D T++ +
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Query: 443 LSA 445
S+
Sbjct: 268 CSS 270
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 212/511 (41%), Gaps = 104/511 (20%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM------ 78
N +I+ Y + AR +FD MP+R++VSW ++TGYV+ + LF SM
Sbjct: 100 NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFP 159
Query: 79 ---------------PQKDVVSW-------------NAMLSGYAQ---NGYADEAREVFY 107
P K V NA++S Y + A EA VF
Sbjct: 160 NEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFE 219
Query: 108 QMPHKNAISWNGLLAAY---------------VHN-------GRIEEACRLFDSKSDW-- 143
+ KN ++WN ++AA+ +H+ + C SD
Sbjct: 220 AIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVP 279
Query: 144 ELISWNCLM-------GGFVKRKMLGAA---------------RKLFDKM-HVRDVVSWN 180
+S CL G V + + A KLF +M H RD+V+WN
Sbjct: 280 NEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWN 339
Query: 181 TMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ- 235
+I+ +A D +A +LF Q + D +T+++++ A + Q+ +
Sbjct: 340 GIITAFAV-YDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKG 398
Query: 236 ---KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF 292
+ + N+++ Y + +D+ +F+ M SR+V SWN+M+ Y +G + +F
Sbjct: 399 GFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVF 458
Query: 293 DMMP-QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR-STFSCALSTCADIAA 350
M D ++ A++S + G EE L +F + E+L + + ++C + +
Sbjct: 459 QKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAER 518
Query: 351 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS--IGE--ANDVFEGIEEKDVVSWNT 406
+++ Q+ + V ALLG K G+ +G+ A+ + E +E + +S+
Sbjct: 519 FAEAEEVIKQM---PMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQ 575
Query: 407 MIAGYARHGFGKQALMVFESMKTIGVK--PD 435
M Y G +A + + M+T V+ PD
Sbjct: 576 MSNIYNAEGSFNEANLSIKEMETWRVRKEPD 606
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 312 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY--ETG 369
++G A+++F + +S + ++ CA+ L G +H ++ Y
Sbjct: 38 RSGDIRRAVSLFYSAPVELQS--QQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQN 95
Query: 370 CFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 429
+ N L+ MY KCG+I A VF+ + E++VVSW +I GY + G ++ +F SM +
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS 155
Query: 430 IGVKPDEITMVGVLSACSH 448
P+E T+ VL++C +
Sbjct: 156 -HCFPNEFTLSSVLTSCRY 173
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 201/613 (32%), Positives = 323/613 (52%), Gaps = 38/613 (6%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM--------PQRDLVSW 55
GH A ++F MP+ S +SYN +I Y+R + A +F +M P +
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 56 NVMLTGYVRNRRLGDAR--RLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN 113
G +++ +LG R+ S +D NA+L+ Y G + AR+VF M +++
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 114 AISWNGLLAAYVHNGRIEEACRLFDSKSDW-----------ELISWNCLMGGFVKRKMLG 162
ISWN +++ Y NG + +A +F DW ++S + G +M
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMF----DWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238
Query: 163 AARKLFDKMHVRDVVSW-NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 221
KL ++ + D + N +++ Y + G M +A+ +FD+ +DV TWT M++GY ++G
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDG 298
Query: 222 MLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS----WN 273
++ A M + N ++ ++V+ + K++ + L + V S
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIET 358
Query: 274 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 333
++I+ Y + + ++F + W+AII+G Q +AL +F ++R+
Sbjct: 359 SLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEP 418
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
N +T + L A +A L IH + KTG+ + L+ +Y KCG++ A+ +F
Sbjct: 419 NIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF 478
Query: 394 EGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 449
GI+EK DVV W +I+GY HG G AL VF M GV P+EIT L+ACSH+
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHS 538
Query: 450 GLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGA 509
GL++ G F M + Y S HYTC++DLLGRAGRL+EA +L+ +PFEP + WGA
Sbjct: 539 GLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGA 598
Query: 510 LLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 569
LL A H N +LGE AA +F++EP N+G YVLL+N+YAA GRW D +RS M +VG+
Sbjct: 599 LLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGL 658
Query: 570 QKVTGYSWVEVQN 582
+K G+S +E+++
Sbjct: 659 RKKPGHSTIEIRS 671
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 204/469 (43%), Gaps = 62/469 (13%)
Query: 120 LLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM-------- 171
L Y G I A +LF+ L+S+N ++ +V+ + A +F +M
Sbjct: 55 LSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCV 114
Query: 172 -------------------------HVRDVVSW--------NTMISGYAQDGDMSQAKNL 198
H R + SW N +++ Y G + A+++
Sbjct: 115 PDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDV 174
Query: 199 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN------EISYNAMVAGYVQSN 252
FD ++DV +W M+SGY +NG +++A FD M ++ I V G+++
Sbjct: 175 FDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKD- 233
Query: 253 KMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 308
++M R + + + + + N ++ Y + G + +AR +FD M +RD ++W +I+
Sbjct: 234 -LEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 309 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET 368
GY + G E AL + ++ +G N T + +S C D + GK +HG V+ +
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS 352
Query: 369 GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK 428
+ +L+ MY KC + VF G + W+ +IAG ++ AL +F+ M+
Sbjct: 353 DIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMR 412
Query: 429 TIGVKPDEITMVGVLSACSHAGLID-RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGR 487
V+P+ T+ +L A +A L D R + S T ++ + + G
Sbjct: 413 REDVEPNIATLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGT 470
Query: 488 LEEAQDLMRNMPFEPPAAS---WGALLGASRIHGNTELGEKAAEMVFKM 533
LE A + + + + WGAL+ +HG+ G A ++ +M
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD---GHNALQVFMEM 516
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 72/317 (22%)
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ---- 235
+T+ YA G ++ A+ LF++ P + ++ ++ YV+ G+ +A + F +M
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 236 -------------------------------------KNEISYNAMVAGYVQSNKMDMAR 258
+++ NA++A Y+ K++MAR
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 259 ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 318
++F+ M +R+V SWNTMI+GY +NG + A +FD M
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN--------------------- 211
Query: 319 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 378
+ L+ +T L C + LE+G+ +H V + V NAL+
Sbjct: 212 ----------ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVN 261
Query: 379 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
MY KCG + EA VF+ +E +DV++W MI GY G + AL + M+ GV+P+ +T
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 439 MVGVLSACSHAGLIDRG 455
+ ++S C A ++ G
Sbjct: 322 IASLVSVCGDALKVNDG 338
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 205/466 (43%), Gaps = 74/466 (15%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR--DLVSWNVM 58
M G + A VF+ M R +S+N MISGY RN + A +FD M DL ++
Sbjct: 163 MNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIV 222
Query: 59 ----LTGYVRNRRLG-------DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFY 107
+ G++++ +G + +RL D + K NA+++ Y + G DEAR VF
Sbjct: 223 SMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK-----NALVNMYLKCGRMDEARFVFD 277
Query: 108 QMPHKNAISWNGLLAAYVHNGRIE---EACRLF-------DSKSDWELISW--------- 148
+M ++ I+W ++ Y +G +E E CRL ++ + L+S
Sbjct: 278 RMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVND 337
Query: 149 -NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 207
CL G V++++ D++ ++IS YA+ + +F +
Sbjct: 338 GKCLHGWAVRQQVYS------------DIIIETSLISMYAKCKRVDLCFRVFSGASKYHT 385
Query: 208 FTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEA 263
W+A+++G VQN ++ +A F +M ++ N + N+++ Y + A +
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCY 445
Query: 264 MPSRNVSSWNTMITG----YGQNGDIAQARKLFDMMPQ----RDCVSWAAIISGYAQTGH 315
+ S TG Y + G + A K+F+ + + +D V W A+ISGY G
Sbjct: 446 LTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Query: 316 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI------HGQVVKTGYETG 369
AL +F+E+ R G + N TF+ AL+ C+ +E G + H + +
Sbjct: 506 GHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYT 565
Query: 370 CFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARH 414
C V LLG + G + EA ++ I E W ++A H
Sbjct: 566 CIVD--LLG---RAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 141/266 (53%), Gaps = 11/266 (4%)
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
+T+ Y G I ARKLF+ MPQ +S+ +I Y + G Y +A+++FI + +G
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 333 L--NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 390
+ T+ ++ +++LG +HG+++++ + +V NALL MY G + A
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 391 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 450
DVF+ ++ +DV+SWNTMI+GY R+G+ ALM+F+ M V D T+V +L C H
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK 232
Query: 451 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 510
++ G + + ++ + + ++++ + GR++EA+ + M +W +
Sbjct: 233 DLEMGRN-VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCM 290
Query: 511 LGASRIHGNTELG--EKAAEMVFKME 534
I+G TE G E A E+ M+
Sbjct: 291 -----INGYTEDGDVENALELCRLMQ 311
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 281/516 (54%), Gaps = 13/516 (2%)
Query: 118 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 177
N + A R++ A + + +N L GFV + +L+ +M +RD V
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRM-LRDSV 867
Query: 178 SWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW---------TAMVSGYVQNGMLDEART 228
S ++ Y+ S + F +S ++ + T ++ Y G + EAR
Sbjct: 868 SPSSYT--YSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARK 925
Query: 229 FFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQA 288
FD+MP++++I++ MV+ Y + MD A L M +N ++ N +I GY G++ QA
Sbjct: 926 VFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQA 985
Query: 289 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI 348
LF+ MP +D +SW +I GY+Q Y EA+ +F ++ +G + T S +S CA +
Sbjct: 986 ESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHL 1045
Query: 349 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 408
LE+GK++H ++ G+ ++G+AL+ MY KCGS+ A VF + +K++ WN++I
Sbjct: 1046 GVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSII 1105
Query: 409 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 468
G A HGF ++AL +F M+ VKP+ +T V V +AC+HAGL+D G + SM DYS+
Sbjct: 1106 EGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSI 1165
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 528
+ +HY M+ L +AG + EA +L+ NM FEP A WGALL RIH N + E A
Sbjct: 1166 VSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFN 1225
Query: 529 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV-TGYSWVEVQNKIHKF 587
+ +EP NSG Y LL ++YA RW D +R RMR++G++K+ G S + + + H F
Sbjct: 1226 KLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLF 1285
Query: 588 TVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLV 623
D H D + L+E+ +M GYV T+ V
Sbjct: 1286 AAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 194/433 (44%), Gaps = 65/433 (15%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PH 111
N +T +RL A M + +V +NA+ G+ + + E++ +M
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 112 KNAISWNGLLAA---------------------------------YVHNGRIEEACRLFD 138
++ +++ L+ A Y GRI EA ++FD
Sbjct: 869 PSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFD 928
Query: 139 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 198
+ + I+W ++ + + + +A L ++M ++ + N +I+GY G++ QA++L
Sbjct: 929 EMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESL 988
Query: 199 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 254
F+Q P +D+ +WT M+ GY QN EA F +M ++ +E++ + +++ +
Sbjct: 989 FNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVL 1048
Query: 255 DMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 310
++ +E+ + +V + ++ Y + G + +A +F +P+++ W +II G
Sbjct: 1049 EIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGL 1108
Query: 311 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 370
A G +EAL MF +++ + N TF + C ++ G++I+ ++ +
Sbjct: 1109 AAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI----DDYS 1164
Query: 371 FVGNA-----LLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARH--------GF 416
V N ++ ++ K G I EA ++ +E E + V W ++ G H F
Sbjct: 1165 IVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAF 1224
Query: 417 GKQALMVFESMKT 429
K LMV E M +
Sbjct: 1225 NK--LMVLEPMNS 1235
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 33/317 (10%)
Query: 3 NGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGY 62
G A +VF+ MP R +++ M+S Y R A L ++M +++ + N ++ GY
Sbjct: 917 TGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGY 976
Query: 63 VRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA 122
+ L A LF+ MP KD++SW M+ GY+QN EA VFY+M + G++
Sbjct: 977 MGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE------GIIP 1030
Query: 123 AYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 182
V + AC + + L GFV +G+A +
Sbjct: 1031 DEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSA-----------------L 1073
Query: 183 ISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNE 238
+ Y++ G + +A +F P +++F W +++ G +G EA F +M + N
Sbjct: 1074 VDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNA 1133
Query: 239 ISYNAMVAGYVQSNKMDMARELFEAMPS-----RNVSSWNTMITGYGQNGDIAQARKLF- 292
+++ ++ + +D R ++ +M NV + M+ + + G I +A +L
Sbjct: 1134 VTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIG 1193
Query: 293 DMMPQRDCVSWAAIISG 309
+M + + V W A++ G
Sbjct: 1194 NMEFEPNAVIWGALLDG 1210
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 187/607 (30%), Positives = 314/607 (51%), Gaps = 64/607 (10%)
Query: 30 GYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVS 85
GY ++AR +FD++P+ D W VML Y N+ + +L+D + + D +
Sbjct: 90 GYTKDARL-----VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV 144
Query: 86 WNAMLSGYAQNGYADEAREVFYQM---PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSD 142
++ L + D +++ Q+ P + + GLL Y G I+ A ++F+ +
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITL 204
Query: 143 WELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV----SWNTMI--------------- 183
++ W ++ G+VK + LF++M +V+ ++ T+I
Sbjct: 205 RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 184 ------SG--------------YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 223
SG Y + GD+S A+ +F++ H D+ WTAM+ GY NG +
Sbjct: 265 HGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV 324
Query: 224 DEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNT----- 274
+EA + F +M + N ++ ++++G +++ R + S V W+T
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL--SIKVGIWDTNVANA 382
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
++ Y + A+ +F+M ++D V+W +IISG++Q G EAL +F + + + N
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPN 442
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGY--ETGCFVGNALLGMYFKCGSIGEANDV 392
T + S CA + +L +G +H VK G+ + VG ALL Y KCG A +
Sbjct: 443 GVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLI 502
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI 452
F+ IEEK+ ++W+ MI GY + G +L +FE M KP+E T +LSAC H G++
Sbjct: 503 FDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMV 562
Query: 453 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
+ G +YF SM KDY+ TPS+KHYTCM+D+L RAG LE+A D++ MP +P +GA L
Sbjct: 563 NEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLH 622
Query: 513 ASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 572
+H +LGE + + + P ++ YVL+SNLYA+ GRW A +R+ M+ G+ K+
Sbjct: 623 GCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKI 682
Query: 573 TGYSWVE 579
G+S +E
Sbjct: 683 AGHSTME 689
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 240/491 (48%), Gaps = 38/491 (7%)
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
D+ ++S Y GY +AR VF Q+P + W +L Y N E +L+D
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDL-- 132
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFD-----KMHVR-------DVVSWNTMISGYAQD 189
L+ V K L A +L D K+H + D V ++ YA+
Sbjct: 133 ---LMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKC 189
Query: 190 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMV 245
G++ A +F+ ++V WT+M++GYV+N + +E F++M + NE +Y ++
Sbjct: 190 GEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI 249
Query: 246 AGYVQSNKMDMARELFEAMPSRNVSSWNTMITG----YGQNGDIAQARKLFDMMPQRDCV 301
+ + + + + + + ++T Y + GDI+ AR++F+ D V
Sbjct: 250 MACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLV 309
Query: 302 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 361
W A+I GY G EAL++F ++K N T + LS C I LELG+ +HG
Sbjct: 310 MWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLS 369
Query: 362 VKTG-YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 420
+K G ++T V NAL+ MY KC +A VFE EKD+V+WN++I+G++++G +A
Sbjct: 370 IKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 421 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCMI 479
L +F M + V P+ +T+ + SAC+ G + G+ + YS+ + + S T ++
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 480 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT----ELGEKAAEMVFKME- 534
D + G + A+ L+ + E +W A++G G+T EL E EM+ K +
Sbjct: 488 DFYAKCGDPQSAR-LIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFE---EMLKKQQK 543
Query: 535 PHNSGMYVLLS 545
P+ S +LS
Sbjct: 544 PNESTFTSILS 554
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 93/221 (42%), Gaps = 16/221 (7%)
Query: 322 MFIEIKRDGESLNRSTFS---CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 378
+ + + DG SL+ + S LS C +I +L +Q HG + G + L+
Sbjct: 28 LILTEENDGSSLHYAASSPCFLLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVS 84
Query: 379 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
+Y G +A VF+ I E D W M+ Y + + + +++ + G + D+I
Sbjct: 85 LYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV 144
Query: 439 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH--YTCMIDLLGRAGRLEEAQDLMR 496
L AC+ +D G + + K PS + T ++D+ + G ++ A +
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVK----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFN 200
Query: 497 NMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHN 537
++ W +++ + +L E+ + +M +N
Sbjct: 201 DITLR-NVVCWTSMIAG---YVKNDLCEEGLVLFNRMRENN 237
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 328 bits (840), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 328/647 (50%), Gaps = 64/647 (9%)
Query: 30 GYLRNARFSL-ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNA 88
G+ R S+ AR +F +M +R L WN +L R ++ + F M + + N
Sbjct: 2 GFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF 61
Query: 89 MLSGYAQNGYADEAREVFY-QMPH---KNAISW-------NGLLAAYVHNGRIEEACRLF 137
L + E REV Y +M H K ++ + L+ Y+ GR+ EA R+F
Sbjct: 62 TLPVALKA--CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMF 119
Query: 138 DSKSDWELISWNCLMGGFVK-----------RKMLGAARKLFDKMHVRDVVS-------- 178
D ++++W+ ++ GF K R+M+ A+ D++ + +VS
Sbjct: 120 DELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNS 179
Query: 179 ---------------------WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGY 217
N++++ YA+ +A NLF +DV +W+ +++ Y
Sbjct: 180 RLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACY 239
Query: 218 VQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NV 269
VQNG EA F+ M + N + ++ ++ ++ R+ E + V
Sbjct: 240 VQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEV 299
Query: 270 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF-IEIKR 328
++ Y + +A +F +P++D VSW A+ISG+ G ++ F I +
Sbjct: 300 KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
Query: 329 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 388
+ + L +C+++ LE K H V+K G+++ F+G +L+ +Y +CGS+G
Sbjct: 360 NNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 389 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACS 447
A+ VF GI KD V W ++I GY HG G +AL F M K+ VKP+E+T + +LSACS
Sbjct: 420 ASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 507
HAGLI G F M DY + P+ +HY ++DLLGR G L+ A ++ + MPF P
Sbjct: 480 HAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL 539
Query: 508 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 567
G LLGA RIH N E+ E A+ +F++E +++G Y+L+SN+Y G W + +R+ ++
Sbjct: 540 GTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQR 599
Query: 568 GVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE 614
G++K S +E++ K+H+F D HPEK+ +Y L+ELDL M+ +
Sbjct: 600 GIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 179/398 (44%), Gaps = 45/398 (11%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM-------PQRDLV 53
++ G ALR+F+ + + V++++M+SG+ +N A + F +M P R +
Sbjct: 107 IKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTL 166
Query: 54 SWNVMLTGYVRNRRLGDA------RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFY 107
V + N RLG RR F + D+ N++L+ YA++ EA +F
Sbjct: 167 ITLVSACTKLSNSRLGRCVHGFVIRRGFSN----DLSLVNSLLNCYAKSRAFKEAVNLFK 222
Query: 108 QMPHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLGA 163
+ K+ ISW+ ++A YV NG EA +F D ++ + + C++ L
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 164 ARKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYV 218
RK + + +R +V ++ Y + +A +F + P +DV +W A++SG+
Sbjct: 283 GRKTHE-LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 341
Query: 219 QNGMLDEARTFFDQMPQKNEISYNAMV----------AGYVQSNKMDMAREL---FEAMP 265
NGM + F M +N +A++ G+++ K + + F++ P
Sbjct: 342 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401
Query: 266 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 325
S ++ Y + G + A K+F+ + +D V W ++I+GY G +AL F
Sbjct: 402 FIGAS----LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNH 457
Query: 326 IKRDGE-SLNRSTFSCALSTCADIAALELGKQIHGQVV 362
+ + E N TF LS C+ + G +I +V
Sbjct: 458 MVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV 495
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 328 bits (840), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 176/462 (38%), Positives = 257/462 (55%), Gaps = 11/462 (2%)
Query: 164 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD--------QSPHQDVFTWTAMVS 215
ARKLFD +N +I Y ++ L++ S H F + A S
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 216 GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTM 275
+ FF + + ++ Y + + AR +F+ M R+V WN M
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 276 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLN 334
ITGY + GD+ A +LFD MP+++ SW +ISG++Q G+Y EAL MF+ +++D N
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
T L CA++ LE+G+++ G + G+ +V NA + MY KCG I A +FE
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 395 GI-EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 453
+ ++++ SWN+MI A HG +AL +F M G KPD +T VG+L AC H G++
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVV 334
Query: 454 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 513
+G E F SM + + ++P +HY CMIDLLGR G+L+EA DL++ MP +P A WG LLGA
Sbjct: 335 KGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Query: 514 SRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVT 573
HGN E+ E A+E +FK+EP N G V++SN+YAA+ +W MR M+ + K
Sbjct: 395 CSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAA 454
Query: 574 GYSW-VEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE 614
GYS+ VEV +HKFTV D HP IY LEE+ +M+ E
Sbjct: 455 GYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE 496
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 169/356 (47%), Gaps = 44/356 (12%)
Query: 10 LRVFNTMPRRS-----SVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR 64
LR+ ++ RS S +I+ Y + AR +FD+M +RD+ WN M+TGY R
Sbjct: 101 LRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQR 160
Query: 65 NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN-----G 119
+ A LFDSMP+K+V SW ++SG++QNG EA ++F M ++ N
Sbjct: 161 RGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVS 220
Query: 120 LLAAYVHNGRIEEACRL---------FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK 170
+L A + G +E RL FD+ + N + + K M+ A++LF++
Sbjct: 221 VLPACANLGELEIGRRLEGYARENGFFDN-----IYVCNATIEMYSKCGMIDVAKRLFEE 275
Query: 171 M-HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDE 225
+ + R++ SWN+MI A G +A LF Q + D T+ ++ V GM+ +
Sbjct: 276 LGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVK 335
Query: 226 ARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGY 279
+ F M + ++IS Y M+ + K+ A +L + MP + + W T++
Sbjct: 336 GQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGAC 395
Query: 280 GQNGDIAQA----RKLFDMMPQR--DCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
+G++ A LF + P +CV + I YA ++ L M +K++
Sbjct: 396 SFHGNVEIAEIASEALFKLEPTNPGNCVIMSNI---YAANEKWDGVLRMRKLMKKE 448
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 41/271 (15%)
Query: 284 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 343
++ ARKLFD + +I Y E++ ++ + DG + TF+ +
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 344 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 403
A ++ + +H Q ++G+E+ F L+ Y K G++ A VF+ + ++DV
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPV 150
Query: 404 WNTMIAGYARHGFGKQALMVFESM--------------------------------KTIG 431
WN MI GY R G K A+ +F+SM K
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 432 VKPDEITMVGVLSACSHAGLID--RGTEYFYSMNKDYSVTPSSKHYTC--MIDLLGRAGR 487
VKP+ IT+V VL AC++ G ++ R E + N + Y C I++ + G
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNI-----YVCNATIEMYSKCGM 265
Query: 488 LEEAQDLMRNMPFEPPAASWGALLGASRIHG 518
++ A+ L + + SW +++G+ HG
Sbjct: 266 IDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 51/246 (20%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVM--- 58
R G +A+ +F++MPR++ S+ +ISG+ +N +S A +F M + V N +
Sbjct: 160 RRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVV 219
Query: 59 -----------------LTGYVRNRRLGD--------------------ARRLFDSM-PQ 80
L GY R D A+RLF+ + Q
Sbjct: 220 SVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQ 279
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRL 136
+++ SWN+M+ A +G DEA +F QM + +A+++ GLL A VH G + + L
Sbjct: 280 RNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQEL 339
Query: 137 FDSKSDWELIS-----WNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDG 190
F S + IS + C++ + L A L M ++ D V W T++ + G
Sbjct: 340 FKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Query: 191 DMSQAK 196
++ A+
Sbjct: 400 NVEIAE 405
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 258/444 (58%), Gaps = 12/444 (2%)
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 239
N++ISGY+ G A LFD + +DV TWTAM+ G+V+NG EA +F +M +K +
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM-KKTGV 200
Query: 240 SYNAMV-------AGYVQSNKMDMARELFEAMPSR---NVSSWNTMITGYGQNGDIAQAR 289
+ N M AG V+ + + R +V ++++ YG+ A+
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQ 260
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
K+FD MP R+ V+W A+I+GY Q+ +++ + +F E+ + + N T S LS CA +
Sbjct: 261 KVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVG 320
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 409
AL G+++H ++K E G L+ +Y KCG + EA VFE + EK+V +W MI
Sbjct: 321 ALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 469
G+A HG+ + A +F +M + V P+E+T + VLSAC+H GL++ G F SM +++
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNME 440
Query: 470 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 529
P + HY CM+DL GR G LEEA+ L+ MP EP WGAL G+ +H + ELG+ AA
Sbjct: 441 PKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASR 500
Query: 530 VFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTV 589
V K++P +SG Y LL+NLY+ S W + +R +M+D V K G+SW+EV+ K+ +F
Sbjct: 501 VIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIA 560
Query: 590 GDCFHP-EKDRIYAFLEELDLKMR 612
D P E D +Y L+ + ++MR
Sbjct: 561 FDDKKPLESDDLYKTLDTVGVQMR 584
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 25/295 (8%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
N +++GY + A RLFD KDVV+W AM+ G+ +NG A EA F +M K +
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM-KKTGV 200
Query: 116 SWNGLLAAYVHN--GRIEEA--------CRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 165
+ N + V G++E+ L + ++ + L+ + K A+
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQ 260
Query: 166 KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF----TWTAMVSGYVQNG 221
K+FD+M R+VV+W +I+GY Q + +F++ DV T ++++S G
Sbjct: 261 KVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVG 320
Query: 222 MLDEARTFFDQMPQKNEISYN-----AMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMI 276
L R M KN I N ++ YV+ ++ A +FE + +NV +W MI
Sbjct: 321 ALHRGRRVHCYMI-KNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMI 379
Query: 277 TGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEIK 327
G+ +G A LF M V++ A++S A G EE +F+ +K
Sbjct: 380 NGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMK 434
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 152/352 (43%), Gaps = 60/352 (17%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 81
N++ISGY + F A LFD +D+V+W M+ G+VRN +A F M +
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 82 -------------------------------------DVVSWNAMLSGYAQNGYADEARE 104
DV ++++ Y + D+A++
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 105 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS--KSDWEL--ISWNCLMGGFVKRKM 160
VF +MP +N ++W L+A YV + ++ +F+ KSD + + ++
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 161 LGAARKLFDKMHVRDVVSWN-----TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 215
L R++ M +++ + N T+I Y + G + +A +F++ ++V+TWTAM++
Sbjct: 322 LHRGRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 216 GYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR---- 267
G+ +G +A F M NE+++ A+++ ++ R LF +M R
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNME 440
Query: 268 -NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC-VSWAAIISGYAQTGHYE 317
+ M+ +G+ G + +A+ L + MP V W A+ YE
Sbjct: 441 PKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 113/241 (46%), Gaps = 32/241 (13%)
Query: 288 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM--------FIEIKRDGESLNRSTFS 339
AR+L + W ++I GH+ + + + ++R+G +R TF
Sbjct: 55 ARRLLCQLQTLSIQLWDSLI------GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFP 108
Query: 340 CALSTCADIAALELGK----QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 395
L A +L Q H +VK G ++ FV N+L+ Y G A+ +F+G
Sbjct: 109 PLLK-----AVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDG 163
Query: 396 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
E+KDVV+W MI G+ R+G +A++ F MK GV +E+T+V VL A AG ++
Sbjct: 164 AEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA---AGKVE-D 219
Query: 456 TEYFYSMNKDYSVTPSSKHY----TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
+ S++ Y T K + ++D+ G+ ++AQ + MP +W AL+
Sbjct: 220 VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALI 278
Query: 512 G 512
Sbjct: 279 A 279
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 60/236 (25%)
Query: 4 GHC---DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL-------- 52
G C D A +VF+ MP R+ V++ A+I+GY+++ F +F++M + D+
Sbjct: 251 GKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLS 310
Query: 53 -------------------------------VSWNVMLTGYVRNRRLGDARRLFDSMPQK 81
+ ++ YV+ L +A +F+ + +K
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLF 137
+V +W AM++G+A +GYA +A ++FY M N +++ +L+A H G +EE RLF
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 138 ---------DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV-VSWNTMI 183
+ K+D + C++ F ++ +L A+ L ++M + V W +
Sbjct: 431 LSMKGRFNMEPKAD----HYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/488 (34%), Positives = 277/488 (56%), Gaps = 18/488 (3%)
Query: 105 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF----------DSKSDWELISWNCLMGG 154
VF ++P WN L+ Y + E + + + L+ C G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 155 FVK--RKMLGAARKL-FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT 211
V+ + G ++ FDK DVV + + Y + D+ A+ +F + P ++ +WT
Sbjct: 125 QVRVGSSVHGLVLRIGFDK----DVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWT 180
Query: 212 AMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS 271
A+V YV++G L+EA++ FD MP++N S+NA+V G V+S + A++LF+ MP R++ S
Sbjct: 181 ALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS 240
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 331
+ +MI GY + GD+ AR LF+ D +W+A+I GYAQ G EA +F E+
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQV-VKTGYETGCFVGNALLGMYFKCGSIGEAN 390
+ +S C+ + EL +++ + + + +V AL+ M KCG + A
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAA 360
Query: 391 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 450
+FE + ++D+VS+ +M+ G A HG G +A+ +FE M G+ PDE+ +L C +
Sbjct: 361 KLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
Query: 451 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 510
L++ G YF M K YS+ S HY+C+++LL R G+L+EA +L+++MPFE A++WG+L
Sbjct: 421 LVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSL 480
Query: 511 LGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
LG +HGNTE+ E A +F++EP ++G YVLLSN+YAA RW D ++R +M + G+
Sbjct: 481 LGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGIT 540
Query: 571 KVTGYSWV 578
K+ G SW+
Sbjct: 541 KICGRSWI 548
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 211/432 (48%), Gaps = 36/432 (8%)
Query: 12 VFNTMPRRSSVSYNAMISGY-------------LRNARFSLARDLFDKMPQRDLVSWNVM 58
VF +P + +N +I GY +R R LAR P V N
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSN-- 122
Query: 59 LTGYVR--NRRLGDARRL-FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
G VR + G R+ FD KDVV + + Y + AR+VF +MP +NA+
Sbjct: 123 -NGQVRVGSSVHGLVLRIGFD----KDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAV 177
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 175
SW L+ AYV +G +EEA +FD + L SWN L+ G VK L A+KLFD+M RD
Sbjct: 178 SWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRD 237
Query: 176 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
++S+ +MI GYA+ GDM A++LF+++ DV W+A++ GY QNG +EA F +M
Sbjct: 238 IISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCA 297
Query: 236 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGY---------GQNGDIA 286
KN ++ G + + EL E + S N + Y + G +
Sbjct: 298 KNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMD 357
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
+A KLF+ MPQRD VS+ +++ G A G EA+ +F ++ +G + F+ L C
Sbjct: 358 RAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCG 417
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVG--NALLGMYFKCGSIGEANDVFEGIE-EKDVVS 403
+E G + + ++++ Y + ++ + + G + EA ++ + + E +
Sbjct: 418 QSRLVEEGLR-YFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASA 476
Query: 404 WNTMIAGYARHG 415
W +++ G + HG
Sbjct: 477 WGSLLGGCSLHG 488
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 182/346 (52%), Gaps = 58/346 (16%)
Query: 8 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRR 67
SA +VF MP R++VS+ A++ Y+++ A+ +FD MP+R+L SWN ++ G V++
Sbjct: 163 SARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGD 222
Query: 68 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 127
L +A++LFD MP++D++S+ +M+ GYA+ G AR++F + + +W+ L+ Y N
Sbjct: 223 LVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQN 282
Query: 128 GRIEEACRLF------DSKSD----WELISWNCLMGGF---------VKRKM-------- 160
G+ EA ++F + K D L+S MG F + ++M
Sbjct: 283 GQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYV 342
Query: 161 -------------LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------ 201
+ A KLF++M RD+VS+ +M+ G A G S+A LF++
Sbjct: 343 VPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGI 402
Query: 202 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDM 256
P + FT V G Q+ +++E +F+ M +K I Y+ +V ++ K+
Sbjct: 403 VPDEVAFTVILKVCG--QSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKE 460
Query: 257 ARELFEAMP-SRNVSSWNTMITGYGQNG--DIAQ--ARKLFDMMPQ 297
A EL ++MP + S+W +++ G +G +IA+ AR LF++ PQ
Sbjct: 461 AYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQ 506
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 320/592 (54%), Gaps = 35/592 (5%)
Query: 48 PQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFY 107
P++ + ++ Y + +AR LFD MP +DVV+W AM++GYA + Y A E F+
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 108 QMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKL 167
+M K S N + V ++CR + +++++ L+ G V + LG L
Sbjct: 101 EMV-KQGTSPNEFTLSSVL-----KSCR------NMKVLAYGALVHGVVVK--LGMEGSL 146
Query: 168 FDKMHVRDVVSWNTMISGYAQ-DGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA 226
+ N M++ YA M A +F ++ TWT +++G+ G
Sbjct: 147 YVD---------NAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGG 197
Query: 227 RTFFDQMPQKN-EISYNAMVAGYVQSNKMD---MARELFEAMPSR----NVSSWNTMITG 278
+ QM +N E++ + S +D +++ ++ R N+ N+++
Sbjct: 198 LKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDL 257
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
Y + G +++A+ F M +D ++W +IS ++ EAL MF + G N TF
Sbjct: 258 YCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTF 316
Query: 339 SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF-EGIE 397
+ ++ CA+IAAL G+Q+HG++ + G+ + NAL+ MY KCG+I ++ VF E ++
Sbjct: 317 TSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD 376
Query: 398 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
+++VSW +M+ GY HG+G +A+ +F+ M + G++PD I + VLSAC HAGL+++G +
Sbjct: 377 RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK 436
Query: 458 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIH 517
YF M +Y + P Y C++DLLGRAG++ EA +L+ MPF+P ++WGA+LGA + H
Sbjct: 437 YFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Query: 518 G-NTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 576
N + AA V +++P G YV+LS +YAA G+W D +R MR +G +K G S
Sbjct: 497 KHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMS 556
Query: 577 WVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVE 628
W+ V+N++ F V D P +Y+ L L + R GYV +++D E
Sbjct: 557 WILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVNDQE 608
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 135/303 (44%), Gaps = 33/303 (10%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
N+++ Y R S A+ F +M +DL++WN +++ R+ +A +F + V
Sbjct: 252 NSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFV 310
Query: 85 ----SWNAMLSGYAQNGYADEARE----VFYQMPHKNAISWNGLLAAYVHNGRIEEACRL 136
++ ++++ A + ++ +F + +KN N L+ Y G I ++ R+
Sbjct: 311 PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRV 370
Query: 137 FDSKSDWE-LISWNCLMGGFVKRKMLGAARKLFDKM---HVR-DVVSWNTMISGYAQDGD 191
F D L+SW +M G+ A +LFDKM +R D + + ++S G
Sbjct: 371 FGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGL 430
Query: 192 MSQAKNLFDQ-------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAM 244
+ + F+ +P +D++ + G + G + EA ++MP K + S
Sbjct: 431 VEKGLKYFNVMESEYGINPDRDIYNCVVDLLG--RAGKIGEAYELVERMPFKPDESTWGA 488
Query: 245 VAGYVQSNKMD------MARELFEAMPSRNVSSWNTMITGYGQNG---DIAQARKLFDMM 295
+ G +++K + AR++ E P + V ++ + Y G D A+ RK+ MM
Sbjct: 489 ILGACKAHKHNGLISRLAARKVMELKP-KMVGTYVMLSYIYAAEGKWVDFARVRKMMRMM 547
Query: 296 PQR 298
+
Sbjct: 548 GNK 550
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 196/649 (30%), Positives = 322/649 (49%), Gaps = 62/649 (9%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 81
N ++ Y++ A LFD+MP+RD VSWN M++GY +L DA LF M +
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 82 -DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN-----GLLAAYVHNGRIEEACR 135
D S++ +L G A D +V + + K N L+ Y R+E+A
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQV-HGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFE 157
Query: 136 LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW---------------- 179
F S+ +SWN L+ GFV+ + + A L M ++ V+
Sbjct: 158 AFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPM 217
Query: 180 ------------------------NTMISGYAQDGDMSQAKNLFD-QSPHQDVFTWTAMV 214
N MIS YA G +S AK +FD +D+ +W +M+
Sbjct: 218 FCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMI 277
Query: 215 SGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV- 269
+G+ ++ + + A F QM + + +Y +++ + L + + +
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337
Query: 270 ---SSWNTMITGYGQ--NGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 324
S+ N +I+ Y Q G + A LF+ + +D +SW +II+G+AQ G E+A+ F
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS 397
Query: 325 EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 384
++ ++ FS L +C+D+A L+LG+QIH K+G+ + FV ++L+ MY KCG
Sbjct: 398 YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCG 457
Query: 385 SIGEANDVFEGIEEK-DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 443
I A F+ I K V+WN MI GYA+HG G+ +L +F M VK D +T +L
Sbjct: 458 IIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAIL 517
Query: 444 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 503
+ACSH GLI G E M Y + P +HY +DLLGRAG + +A++L+ +MP P
Sbjct: 518 TACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPD 577
Query: 504 AASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSR 563
LG R G E+ + A + ++EP + YV LS++Y+ +W + +++
Sbjct: 578 PMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKM 637
Query: 564 MRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR 612
M++ GV+KV G+SW+E++N++ F D +P IY +++L +M+
Sbjct: 638 MKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 154/311 (49%), Gaps = 23/311 (7%)
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
+ D+ N ++ Y + G + A LFD+ P +D +W M+SGY G L++A F
Sbjct: 32 ISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTC 91
Query: 233 MPQKNE----ISYNAMVAGYVQSNKMDMARE----LFEAMPSRNVSSWNTMITGYGQNGD 284
M + S++ ++ G + D+ + + + NV ++++ Y +
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 285 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM--FIEIKRDGESLNRSTFSCAL 342
+ A + F + + + VSW A+I+G+ Q + A + +E+K +++ TF+ L
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA-AVTMDAGTFAPLL 210
Query: 343 STCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI-EEKDV 401
+ D L KQ+H +V+K G + + NA++ Y CGS+ +A VF+G+ KD+
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 402 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS-----------HAG 450
+SWN+MIAG+++H + A +F M+ V+ D T G+LSACS H
Sbjct: 271 ISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGM 330
Query: 451 LIDRGTEYFYS 461
+I +G E S
Sbjct: 331 VIKKGLEQVTS 341
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 147/322 (45%), Gaps = 60/322 (18%)
Query: 4 GHCDSALRVFNTMP-RRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSW--- 55
G A RVF+ + + +S+N+MI+G+ ++ A +LF +M + D+ ++
Sbjct: 252 GSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGL 311
Query: 56 --------------------------------NVMLTGYVR--NRRLGDARRLFDSMPQK 81
N +++ Y++ + DA LF+S+ K
Sbjct: 312 LSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK 371
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLF 137
D++SWN++++G+AQ G +++A + F + + +++ LL + ++ ++
Sbjct: 372 DLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIH 431
Query: 138 DSKSDWELISWNCLMGGFV----KRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDM 192
+ +S ++ + K ++ +ARK F ++ + V+WN MI GYAQ G
Sbjct: 432 ALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLG 491
Query: 193 SQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNA 243
+ +LF Q +Q+V T+TA+++ G++ E + M +I Y A
Sbjct: 492 QVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAA 551
Query: 244 MVAGYVQSNKMDMARELFEAMP 265
V ++ ++ A+EL E+MP
Sbjct: 552 AVDLLGRAGLVNKAKELIESMP 573
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Query: 358 HGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFG 417
H +K G + +V N +L Y K G +G AN +F+ + ++D VSWNTMI+GY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 418 KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC 477
+ A +F MK G D + +L + D G E + + + +
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG-EQVHGLVIKGGYECNVYVGSS 141
Query: 478 MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
++D+ + R+E+A + + + EP + SW AL+
Sbjct: 142 LVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIA 175
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/622 (30%), Positives = 312/622 (50%), Gaps = 29/622 (4%)
Query: 12 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 71
VF+ P S +IS Y R RF A +FD++ R+ S+N +L Y DA
Sbjct: 50 VFSIKPDNFLAS--KLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDA 107
Query: 72 RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS--WNGLLAAYVHNGR 129
LF +SW S Y+ + ++ + + + W G LA VH
Sbjct: 108 FSLF--------LSWIGS-SCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 130 IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQD 189
I FDS ++ N ++ + K + +ARK+FD+M RDVVSWN+MISGY+Q
Sbjct: 159 IRGG---FDS----DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQS 211
Query: 190 GDMSQAKNLF-------DQSPHQDVFTWTAMVSGYVQNGM--LDEARTFFDQMPQKNEIS 240
G K ++ D P+ G + + L+ + + Q +
Sbjct: 212 GSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSL 271
Query: 241 YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 300
NA++ Y + +D AR LF+ M ++ ++ +I+GY +G + +A LF M
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 360
+W A+ISG Q H+EE +N F E+ R G N T S L + + L+ GK+IH
Sbjct: 332 STWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAF 391
Query: 361 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 420
++ G + +V +++ Y K G + A VF+ +++ +++W +I YA HG A
Sbjct: 392 AIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSA 451
Query: 421 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 480
+F+ M+ +G KPD++T+ VLSA +H+G D F SM Y + P +HY CM+
Sbjct: 452 CSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVS 511
Query: 481 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM 540
+L RAG+L +A + + MP +P A WGALL + + G+ E+ A + +F+MEP N+G
Sbjct: 512 VLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGN 571
Query: 541 YVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRI 600
Y +++NLY +GRW +A +R++M+ +G++K+ G SW+E + + F D +
Sbjct: 572 YTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEM 631
Query: 601 YAFLEELDLKMRREGYVSSTKL 622
Y +E L M + Y+ +L
Sbjct: 632 YEIIEGLVESMSDKEYIRKQEL 653
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 172/417 (41%), Gaps = 94/417 (22%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------------------- 47
+SA +VF+ M R VS+N+MISGY ++ F + ++ M
Sbjct: 184 ESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQA 243
Query: 48 ---------------------PQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSW 86
Q DL N ++ Y + L AR LFD M +KD V++
Sbjct: 244 CGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTY 303
Query: 87 NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF--------- 137
A++SGY +G EA +F +M +WN +++ + N EE F
Sbjct: 304 GAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSR 363
Query: 138 ------------------------------DSKSDWELISWNCLMGGFVKRKMLGAARKL 167
+ +D + ++ + K L A+++
Sbjct: 364 PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRV 423
Query: 168 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGML 223
FD R +++W +I+ YA GD A +LFDQ D T TA++S + +G
Sbjct: 424 FDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDS 483
Query: 224 DEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMIT 277
D A+ FD M K +I Y MV+ ++ K+ A E MP ++ W ++
Sbjct: 484 DMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLN 543
Query: 278 GYGQNGDIAQAR----KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
G GD+ AR +LF+M P+ + ++ + + Y Q G +EEA + ++KR G
Sbjct: 544 GASVLGDLEIARFACDRLFEMEPE-NTGNYTIMANLYTQAGRWEEAEMVRNKMKRIG 599
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 125/288 (43%), Gaps = 54/288 (18%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ----------- 49
M +G A+ +F+ M ++NAMISG ++N + F +M +
Sbjct: 311 MAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLS 370
Query: 50 -----------------------RDLVSWNVMLT-----GYVRNRRLGDARRLFDSMPQK 81
R+ N+ +T Y + L A+R+FD+ +
Sbjct: 371 SLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDR 430
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLF 137
+++W A+++ YA +G +D A +F QM + ++ +L+A+ H+G + A +F
Sbjct: 431 SLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIF 490
Query: 138 DS---KSDWE--LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS-WNTMISGYAQDGD 191
DS K D E + + C++ + L A + KM + + W +++G + GD
Sbjct: 491 DSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGD 550
Query: 192 MSQAK----NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
+ A+ LF+ P ++ +T M + Y Q G +EA ++M +
Sbjct: 551 LEIARFACDRLFEMEP-ENTGNYTIMANLYTQAGRWEEAEMVRNKMKR 597
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 319 bits (817), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 189/639 (29%), Positives = 317/639 (49%), Gaps = 59/639 (9%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM------ 78
N+ + + AR +FDKMP D+VSW ++ YV +A LF +M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 79 --PQKDVVSW---------------------------------NAMLSGYAQNGYADEAR 103
P V+S +++L Y + G D++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 104 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS----WNCLMGGFVKRK 159
VF +MP +NA++W ++ VH GR +E F S E +S + + +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 160 MLGAARKLFDKMHVRDVVSW----NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 215
+ + + + VR V+ N++ + Y + G+M LF+ +DV +WT+++
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 216 GYVQNGM-LDEARTFF----DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPS---- 266
Y + G + TF Q+P NE ++ +M + +++ +L + S
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVP-PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 267 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 326
++S N+M+ Y G++ A LF M RD +SW+ II GY Q G EE F +
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
++ G + LS ++A +E G+Q+H + G E V ++L+ MY KCGSI
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 387 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
EA+ +F + D+VS MI GYA HG K+A+ +FE +G +PD +T + VL+AC
Sbjct: 463 KEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTAC 522
Query: 447 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 506
+H+G +D G YF M + Y++ P+ +HY CM+DLL RAGRL +A+ ++ M ++
Sbjct: 523 THSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV 582
Query: 507 WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRD 566
W LL A + G+ E G +AAE + +++P + V L+N+Y+++G +A N+R M+
Sbjct: 583 WTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKA 642
Query: 567 VGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLE 605
GV K G+S +++++ + F GD FHP+ + IY LE
Sbjct: 643 KGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 371 FVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 430
F N+ L G++ A VF+ + D+VSW ++I Y +AL++F +M+ +
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 431 --GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 488
V PD + VL AC + I G E ++ S+ S + ++D+ R G++
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYG-ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 489 EEAQDLMRNMPFEPPAASWGALL 511
+++ + MPF A +W A++
Sbjct: 160 DKSCRVFSEMPFR-NAVTWTAII 181
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 318 bits (815), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 211/739 (28%), Positives = 348/739 (47%), Gaps = 126/739 (17%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM-------------- 47
+ G D A +VF+ MP R++ ++N MI Y+ N + A L+ M
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187
Query: 48 ------PQRDLVS-------------------WNVMLTGYVRNRRLGDARRLFDSMPQK- 81
RD+ S N +++ Y +N L ARRLFD +K
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAIS--------------------- 116
D V WN++LS Y+ +G + E E+F +M P N+ +
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 117 ---------------WNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKML 161
N L+A Y G++ +A R+ ++ ++++WN L+ G+V+ M
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367
Query: 162 GAARKLFDKM----HVRDVVSWNTMISGYAQ-------------------DGDMSQAKNL 198
A + F M H D VS ++I+ + D ++ L
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427
Query: 199 FDQSPH----------------QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NE 238
D +D+ +WT +++GY QN EA F + +K +E
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 487
Query: 239 ISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS---WNTMITGYGQNGDIAQARKLFDMM 295
+ +++ M + +E+ + + + N ++ YG+ ++ A ++F+ +
Sbjct: 488 MILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESI 547
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
+D VSW ++IS A G+ EA+ +F + G S + C LS A ++AL G+
Sbjct: 548 KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGR 607
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 415
+IH +++ G+ + A++ MY CG + A VF+ IE K ++ + +MI Y HG
Sbjct: 608 EIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHG 667
Query: 416 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 475
GK A+ +F+ M+ V PD I+ + +L ACSHAGL+D G + M +Y + P +HY
Sbjct: 668 CGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHY 727
Query: 476 TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEP 535
C++D+LGRA + EA + ++ M EP A W ALL A R H E+GE AA+ + ++EP
Sbjct: 728 VCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEP 787
Query: 536 HNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHP 595
N G VL+SN++A GRW D +R++M+ G++K G SW+E+ K+HKFT D HP
Sbjct: 788 KNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHP 847
Query: 596 EKDRIYAFLEELDLKMRRE 614
E IY L E+ K+ RE
Sbjct: 848 ESKEIYEKLSEVTRKLERE 866
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 155/603 (25%), Positives = 267/603 (44%), Gaps = 70/603 (11%)
Query: 11 RVFNTMPR-RSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLG 69
R+F T P ++ Y + A +FD+MP R +WN M+ YV N
Sbjct: 105 RIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPA 164
Query: 70 DARRLF------------DSMPQ--------KDVVS-------------------WNAML 90
A L+ S P +D+ S NA++
Sbjct: 165 SALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALV 224
Query: 91 SGYAQNGYADEAREVFYQMPHK-NAISWNGLLAAYVHNGRIEEACRLF-------DSKSD 142
S YA+N AR +F K +A+ WN +L++Y +G+ E LF + +
Sbjct: 225 SMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNS 284
Query: 143 WELISWNCLMGGFVKRKMLGA---ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 199
+ ++S GF K LG A L H ++ N +I+ Y + G M QA+ +
Sbjct: 285 YTIVSALTACDGFSYAK-LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL 343
Query: 200 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMD 255
Q + DV TW +++ GYVQN M EA FF M + +E+S +++A + + +
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 256 MARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYA 311
EL + N+ NT+I Y + + F M +D +SW +I+GYA
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 312 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 371
Q + EAL +F ++ + ++ L + + ++ + K+IH +++ G
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTV 522
Query: 372 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 431
+ N L+ +Y KC ++G A VFE I+ KDVVSW +MI+ A +G +A+ +F M G
Sbjct: 523 IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG 582
Query: 432 VKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEE 490
+ D + ++ +LSA + +++G E + Y + K + + S ++D+ G L+
Sbjct: 583 LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA--VAVVDMYACCGDLQS 640
Query: 491 AQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHN--SGMYVLLSNLY 548
A+ + + + +++ A +HG G+ A E+ KM N L+ LY
Sbjct: 641 AKAVFDRIE-RKGLLQYTSMINAYGMHG---CGKAAVELFDKMRHENVSPDHISFLALLY 696
Query: 549 AAS 551
A S
Sbjct: 697 ACS 699
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 317 bits (811), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 202/666 (30%), Positives = 348/666 (52%), Gaps = 51/666 (7%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL----VSWNVMLTGY 62
D +VF+ M R++ V++N +IS Y++ R + A F M + ++ VS+ +
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 63 VRNRRLGDARRLFDSMPQ------KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS 116
+R + A + M + KD+ ++ +S YA+ G + +R VF +N
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 117 WNGLLAAYVHNGRIEEACRLF-DSKSDWELIS-----------WNCLMGGFVKRKMLGAA 164
WN ++ YV N + E+ LF ++ E++S + L + R+ G
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 165 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLD 224
K F ++ +V N+++ Y++ G + ++ +F +DV +W M+S +VQNG+ D
Sbjct: 345 SKNFREL---PIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDD 401
Query: 225 EARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMAREL----------FEAMPSRNVS 270
E +M ++ + I+ A+++ ++ ++ FE M S
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--- 458
Query: 271 SWNTMITGYGQNGDIAQARKLFDM--MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 328
+I Y ++G I ++KLF+ +RD +W ++ISGY Q GH E+ +F ++
Sbjct: 459 ----LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Query: 329 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 388
N T + L C+ I +++LGKQ+HG ++ + FV +AL+ MY K G+I
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 574
Query: 389 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH 448
A D+F +E++ V++ TMI GY +HG G++A+ +F SM+ G+KPD IT V VLSACS+
Sbjct: 575 AEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSY 634
Query: 449 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS-W 507
+GLID G + F M + Y++ PSS+HY C+ D+LGR GR+ EA + ++ + E A W
Sbjct: 635 SGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELW 694
Query: 508 GALLGASRIHGNTELGEKAAEMVFKMEPHN--SGMYVLLSNLYAASGRWADAGNMRSRMR 565
G+LLG+ ++HG EL E +E + K + SG VLLSN+YA +W +R MR
Sbjct: 695 GSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMR 754
Query: 566 DVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLH 625
+ G++K G S +E+ ++ F D HP IY ++ L MR + ++++ V
Sbjct: 755 EKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTP 814
Query: 626 DVEEEE 631
+E +E
Sbjct: 815 SLELDE 820
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 149/587 (25%), Positives = 274/587 (46%), Gaps = 88/587 (14%)
Query: 23 SYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK- 81
S + +S ++ LAR LFD +P+ V WN ++ G++ N +A + M +
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 82 -----DVVSWNAMLSGYAQ------------------------------NGYA------- 99
D ++++ L A+ N Y
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 100 ----DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISW-NC 150
D R+VF M KN ++WN L++ YV GR EACR F E+ +S+ N
Sbjct: 161 CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNV 220
Query: 151 LMGGFVKRKM------LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 204
+ R + G KL D+ +V+D+ ++ IS YA+ GD+ ++ +FD
Sbjct: 221 FPAVSISRSIKKANVFYGLMLKLGDE-YVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 205 QDVFTWTAMVSGYVQNGMLDEA-RTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARE 259
+++ W M+ YVQN L E+ F + + K +E++Y + ++++ R+
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339
Query: 260 LFEAMPSRN-----VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG 314
F S+N + N+++ Y + G + ++ +F M +RD VSW +IS + Q G
Sbjct: 340 -FHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNG 398
Query: 315 HYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG- 373
+E L + E+++ G ++ T + LS +++ E+GKQ H +++ G + F G
Sbjct: 399 LDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ---FEGM 455
Query: 374 -NALLGMYFKCGSIGEANDVFE--GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 430
+ L+ MY K G I + +FE G E+D +WN+MI+GY ++G ++ +VF M
Sbjct: 456 NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQ 515
Query: 431 GVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNK--DYSVTPSSKHYTCMIDLLGRAGR 487
++P+ +T+ +L ACS G +D G + + +S+ + D +V +S ++D+ +AG
Sbjct: 516 NIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVAS----ALVDMYSKAGA 571
Query: 488 LEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 534
++ A+D+ +LG +G +GE+A + M+
Sbjct: 572 IKYAEDMFSQTKERNSVTYTTMILG----YGQHGMGERAISLFLSMQ 614
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 173/385 (44%), Gaps = 61/385 (15%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF-DKMPQRDLVS-------- 54
G +S+ RVF++ R+ +N MI Y++N + +LF + + +++VS
Sbjct: 265 GDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLA 324
Query: 55 -------------------------------WNVMLTGYVRNRRLGDARRLFDSMPQKDV 83
N ++ Y R + + +F SM ++DV
Sbjct: 325 ASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDV 384
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAY--VHNGRIEEACRLF 137
VSWN M+S + QNG DE + Y+M + + I+ LL+A + N I + F
Sbjct: 385 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAF 444
Query: 138 DSKSDWELISWNC-LMGGFVKRKMLGAARKLFDKMHV--RDVVSWNTMISGYAQDGDMSQ 194
+ + N L+ + K ++ ++KLF+ RD +WN+MISGY Q+G +
Sbjct: 445 LIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEK 504
Query: 195 A----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF----FDQMPQKNEISYNAMVA 246
+ + +Q+ + T +++ Q G +D + Q +N +A+V
Sbjct: 505 TFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVD 564
Query: 247 GYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVS 302
Y ++ + A ++F RN ++ TMI GYGQ+G +A LF M + D ++
Sbjct: 565 MYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAIT 624
Query: 303 WAAIISGYAQTGHYEEALNMFIEIK 327
+ A++S + +G +E L +F E++
Sbjct: 625 FVAVLSACSYSGLIDEGLKIFEEMR 649
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 52/284 (18%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNV 57
R G + VF +M R VS+N MIS +++N L +M ++ D ++
Sbjct: 365 RCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTA 424
Query: 58 MLTGY--VRNRRLGD--------------------------------ARRLFD--SMPQK 81
+L+ +RN+ +G +++LF+ ++
Sbjct: 425 LLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAER 484
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRL- 136
D +WN+M+SGY QNG+ ++ VF +M + NA++ +L A G ++ +L
Sbjct: 485 DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH 544
Query: 137 -FDSKS--DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 193
F + D + + L+ + K + A +F + R+ V++ TMI GY Q G
Sbjct: 545 GFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGE 604
Query: 194 QAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 233
+A +LF + D T+ A++S +G++DE F++M
Sbjct: 605 RAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 293/551 (53%), Gaps = 23/551 (4%)
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAY-----VHNGRIEEAC 134
+ WN +++ YA+N +E + +M K +A ++ +L A V GR+
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 135 RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQ 194
S L N L+ + + + +G AR+LFD+M RD VSWN +I+ YA +G S+
Sbjct: 170 IEVSSYKS-SLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 195 AKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-KNEISYNAMVAGYV 249
A LFD+ V TW + G +Q G A +M + AM+ G
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 250 QSNKMDMARELFEAMPSRNVSSW-------NTMITGYGQNGDIAQARKLFDMMPQRDCVS 302
+ + R E SS+ NT+IT Y + D+ A +F + +
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCT 348
Query: 303 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 362
W +IISGYAQ EEA ++ E+ G N T + L CA IA L+ GK+ H ++
Sbjct: 349 WNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 363 K-TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 421
+ ++ + N+L+ +Y K G I A V + + ++D V++ ++I GY G G AL
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVAL 468
Query: 422 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL 481
+F+ M G+KPD +T+V VLSACSH+ L+ G F M +Y + P +H++CM+DL
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDL 528
Query: 482 LGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMY 541
GRAG L +A+D++ NMP++P A+W LL A IHGNT++G+ AAE + +M+P N G Y
Sbjct: 529 YGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYY 588
Query: 542 VLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIY 601
VL++N+YAA+G W+ +R+ MRD+GV+K G +W++ + F+VGD PE Y
Sbjct: 589 VLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTY 648
Query: 602 AFLEELDLKMR 612
L+ L+ M+
Sbjct: 649 PLLDGLNQLMK 659
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 211/486 (43%), Gaps = 64/486 (13%)
Query: 49 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 108
+ L N +++ Y R R +G ARRLFD M ++D VSWNA+++ YA G EA E+F +
Sbjct: 176 KSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDK 235
Query: 109 M----PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL-ISWNCLMGGFVKRKMLGA 163
M + I+WN + + G A L ++ + ++ G ++GA
Sbjct: 236 MWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGA 295
Query: 164 ARKLFDKMHVRDVVSW--------NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 215
R L ++H + S NT+I+ Y++ D+ A +F Q+ + TW +++S
Sbjct: 296 IR-LGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIIS 354
Query: 216 GYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS 271
GY Q +EA +M Q N I+ +++ + + +E + R
Sbjct: 355 GYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFK 414
Query: 272 -----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 326
WN+++ Y ++G I A+++ D+M +RD V++ ++I GY G AL +F E+
Sbjct: 415 DYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEM 474
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
R G + T LS C+ + G+++ ++ C G +F C
Sbjct: 475 TRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKM-------QCEYGIRPCLQHFSC--- 524
Query: 387 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
M+ Y R GF +A + +M KP T +L+AC
Sbjct: 525 --------------------MVDLYGRAGFLAKAKDIIHNMP---YKPSGATWATLLNAC 561
Query: 447 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI-DLLGRAG---RLEEAQDLMRNMPFEP 502
G G ++ K + P + Y +I ++ AG +L E + +MR++ +
Sbjct: 562 HIHGNTQIGK---WAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKK 618
Query: 503 -PAASW 507
P +W
Sbjct: 619 DPGCAW 624
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 156/393 (39%), Gaps = 79/393 (20%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM----PQRDLVSWNVMLTGYVR 64
A R+F+ M R +VS+NA+I+ Y +S A +LFDKM + +++WN++ G ++
Sbjct: 198 ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 65 NRR----LGDARRLFDSMPQKDVVSW---------------------------------- 86
LG R+ + D V+
Sbjct: 258 TGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNV 317
Query: 87 -NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL 145
N +++ Y++ A VF Q + +WN +++ Y + EEA L E+
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLR-----EM 372
Query: 146 ISWNCLMGGFVKRKMLGAARKLFDKMHVRD--------------VVSWNTMISGYAQDGD 191
+ +L ++ + H ++ + WN+++ YA+ G
Sbjct: 373 LVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGK 432
Query: 192 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAG 247
+ AK + D +D T+T+++ GY G A F +M + + ++ A+++
Sbjct: 433 IVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSA 492
Query: 248 YVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC-V 301
S + LF M + ++ M+ YG+ G +A+A+ + MP +
Sbjct: 493 CSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGA 552
Query: 302 SWAAI-----ISGYAQTGHYEEALNMFIEIKRD 329
+WA + I G Q G + A +E+K +
Sbjct: 553 TWATLLNACHIHGNTQIGKW--AAEKLLEMKPE 583
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 111/267 (41%), Gaps = 18/267 (6%)
Query: 311 AQTGHYEEALNMFIEIKRDGES-----LNRSTFSCALSTCADIAALELGKQIHGQVVKTG 365
A GH +A F ++ S L + + LS C D+ A G Q+H + +G
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 366 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 425
E + L+ Y EA + E + + WN +IA YA++ ++ + ++
Sbjct: 74 VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYK 133
Query: 426 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC--MIDLLG 483
M + G++PD T VL AC + G S+ + S Y C +I +
Sbjct: 134 RMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVS---SYKSSLYVCNALISMYK 190
Query: 484 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVL 543
R + A+ L M FE A SW A++ G + +A E+ KM + V+
Sbjct: 191 RFRNMGIARRLFDRM-FERDAVSWNAVINCYASEG---MWSEAFELFDKMWFSGVEVSVI 246
Query: 544 LSNLYAA----SGRWADAGNMRSRMRD 566
N+ + +G + A + SRMR+
Sbjct: 247 TWNIISGGCLQTGNYVGALGLISRMRN 273
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 252/421 (59%), Gaps = 8/421 (1%)
Query: 163 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ-SPHQDVFTWTAMVSGYVQNG 221
+ARK+FD+M R+V +WN MI GY +GD A LF++ S ++ TW M+ GY +
Sbjct: 99 SARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRI 158
Query: 222 MLDEARTFFDQMP--QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGY 279
+++AR F++MP KN +++ M+ YV + KM+ AR+ FE +P +N W+ M++GY
Sbjct: 159 EIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGY 218
Query: 280 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 339
+ GD+ +AR +F + RD V W +I+GYAQ G+ ++A++ F ++ +G + T S
Sbjct: 219 FRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVS 278
Query: 340 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 399
LS CA L++G+++H + G E FV NAL+ MY KCG + A VFE I +
Sbjct: 279 SILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
Query: 400 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF 459
V N+MI+ A HG GK+AL +F +M+++ +KPDEIT + VL+AC H G + G + F
Sbjct: 339 SVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIF 398
Query: 460 YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 519
M K V P+ KH+ C+I LLGR+G+L+EA L++ M +P GALLGA ++H +
Sbjct: 399 SEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMD 457
Query: 520 TELGEKAAEMVFK----MEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGY 575
TE+ E+ +++ ++ +SNLYA + RW A +R M G++K G
Sbjct: 458 TEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGL 517
Query: 576 S 576
S
Sbjct: 518 S 518
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 175/333 (52%), Gaps = 15/333 (4%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ-KDV 83
+++IS Y + AR +FD+MP+R++ +WN M+ GY+ N A LF+ + ++
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNT 144
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMPH--KNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
V+W M+ GY + ++ARE+F +MP KN +W+ +L YV+N ++E+A + F+
Sbjct: 145 VTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIP 204
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF-- 199
+ W+ +M G+ + + AR +F ++ RD+V WNT+I+GYAQ+G A + F
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 200 --DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNK 253
+ D T ++++S Q+G LD R + + N+ NA++ Y +
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 254 MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISG 309
++ A +FE++ R+V+ N+MI+ +G +A ++F M D +++ A+++
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 384
Query: 310 YAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 342
G E L +F E+K N F C +
Sbjct: 385 CVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLI 417
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 211/450 (46%), Gaps = 56/450 (12%)
Query: 18 RRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNV---------MLTGYVRNRRL 68
RR V + + LR + R + K+ + + + V +++ Y + +
Sbjct: 38 RRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCV 97
Query: 69 GDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP-HKNAISWNGLLAAYVHN 127
AR++FD MP+++V +WNAM+ GY NG A A +F ++ +N ++W ++ Y
Sbjct: 98 VSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKR 157
Query: 128 GRIEEACRLFDSKSDWEL---ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMIS 184
IE+A LF+ + +EL +W+ ++G +V + + ARK F+ + ++ W+ M+S
Sbjct: 158 IEIEKARELFE-RMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMS 216
Query: 185 GYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEIS 240
GY + GD+ +A+ +F + +D+ W +++GY QNG D+A F M + + ++
Sbjct: 217 GYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVT 276
Query: 241 YNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMP 296
+++++ QS ++D+ RE+ + R + N +I Y + GD+ A +F+ +
Sbjct: 277 VSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESIS 336
Query: 297 QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQ 356
R ++IS A G +EAL MF ++ + TF L+ C
Sbjct: 337 VRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC----------- 385
Query: 357 IHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGF 416
+HG + G K S + DV + +V + +I R G
Sbjct: 386 VHGGFLMEG---------------LKIFSEMKTQDV-----KPNVKHFGCLIHLLGRSGK 425
Query: 417 GKQALMVFESMKTIGVKPDEITMVGVLSAC 446
K+A + +K + VKP++ + +L AC
Sbjct: 426 LKEA---YRLVKEMHVKPNDTVLGALLGAC 452
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 152/294 (51%), Gaps = 12/294 (4%)
Query: 242 NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ-RDC 300
+++++ Y + + AR++F+ MP RNV++WN MI GY NGD A LF+ + R+
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNT 144
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 360
V+W +I GY + E+A +F + E N +S L + +E ++
Sbjct: 145 VTWIEMIKGYGKRIEIEKARELFERMPF--ELKNVKAWSVMLGVYVNNRKMEDARKFFED 202
Query: 361 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 420
+ E FV + ++ YF+ G + EA +F + +D+V WNT+IAGYA++G+ A
Sbjct: 203 IP----EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDA 258
Query: 421 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 480
+ F +M+ G +PD +T+ +LSAC+ +G +D G E +S+ + + +ID
Sbjct: 259 IDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE-VHSLINHRGIELNQFVSNALID 317
Query: 481 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 534
+ + G LE A + ++ A +++ IHG G++A EM ME
Sbjct: 318 MYAKCGDLENATSVFESISVR-SVACCNSMISCLAIHGK---GKEALEMFSTME 367
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 165/339 (48%), Gaps = 52/339 (15%)
Query: 8 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLA--------------------------- 40
SA +VF+ MP R+ ++NAMI GY+ N LA
Sbjct: 99 SARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRI 158
Query: 41 -----RDLFDKMP--QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGY 93
R+LF++MP +++ +W+VML YV NR++ DAR+ F+ +P+K+ W+ M+SGY
Sbjct: 159 EIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGY 218
Query: 94 AQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWN 149
+ G EAR +FY++ ++ + WN L+A Y NG ++A F + + + ++ +
Sbjct: 219 FRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVS 278
Query: 150 CLMGGFVKRKMLGAARKLFDKMHVRDV-----VSWNTMISGYAQDGDMSQAKNLFDQSPH 204
++ + L R++ ++ R + VS N +I YA+ GD+ A ++F+
Sbjct: 279 SILSACAQSGRLDVGREVHSLINHRGIELNQFVS-NALIDMYAKCGDLENATSVFESISV 337
Query: 205 QDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMAREL 260
+ V +M+S +G EA F M + +EI++ A++ V + ++
Sbjct: 338 RSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKI 397
Query: 261 FEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMM 295
F M ++ NV + +I G++G + +A +L M
Sbjct: 398 FSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 306 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA-LELGKQIHGQVVKT 364
+I + G +AL ++ I+R G L CA + + LGK +H + +K
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFP-GWVPLILRACACVVPRVVLGKLLHSESIKF 75
Query: 365 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVF 424
G + VG++L+ MY KCG + A VF+ + E++V +WN MI GY +G A +F
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF 135
Query: 425 ESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGR 484
E I V + +T + ++ I++ E F M + + K ++ M+ +
Sbjct: 136 EE---ISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK---NVKAWSVMLGVYVN 189
Query: 485 AGRLEEAQDLMRNMPFEPPAASWGALL 511
++E+A+ ++P E A W ++
Sbjct: 190 NRKMEDARKFFEDIP-EKNAFVWSLMM 215
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 306 bits (784), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 283/525 (53%), Gaps = 23/525 (4%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 130
+R+ D SW ++ +Q+ E +V+ M H + I + +
Sbjct: 57 VKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDM-HNSGIPPSSHAVT-----SV 110
Query: 131 EEACRLFDSKSDWELISWNCLMGG-----FVKRKMLGA---------ARKLFDKMHVRDV 176
AC ++ D + I L G +V+ ++G A+K FD + ++
Sbjct: 111 LRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNT 170
Query: 177 VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 236
VSWN+++ GY + G++ +A+ +FD+ P +D +W ++S Y + G + A + F MP K
Sbjct: 171 VSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK 230
Query: 237 NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP 296
+ S+N ++ GYV +M +AR F+AMP +N SW TMI+GY + GD+ A +LF +M
Sbjct: 231 SPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMS 290
Query: 297 QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL--NRSTFSCALSTCADIAALELG 354
++D + + A+I+ Y Q G ++AL +F ++ + + T S +S + + G
Sbjct: 291 KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG 350
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 414
+ + + G + + +L+ +Y K G +A +F + +KD VS++ MI G +
Sbjct: 351 TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGIN 410
Query: 415 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH 474
G +A +F +M + P+ +T G+LSA SH+GL+ G + F SM KD+++ PS+ H
Sbjct: 411 GMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADH 469
Query: 475 YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 534
Y M+D+LGRAGRLEEA +L+++MP +P A WGALL AS +H N E GE A K+E
Sbjct: 470 YGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLE 529
Query: 535 PHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 579
+G L+ +Y++ GRW DA +R +++ + K G SWVE
Sbjct: 530 TDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 165/331 (49%), Gaps = 29/331 (8%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
+ +G D A RVF+ +P + +VS+N +IS Y + A LF MP + SWN+++
Sbjct: 181 LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIG 240
Query: 61 GYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGL 120
GYV R + AR FD+MPQK+ VSW M+SGY + G A E+F M K+ + ++ +
Sbjct: 241 GYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAM 300
Query: 121 LAAYVHNGRIEEACRLF------------DSKSDWELISWNCLMGGFVKRKMLGAARKLF 168
+A Y NG+ ++A +LF D + ++S N +G G + +
Sbjct: 301 IACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLG----NTSFGTWVESY 356
Query: 169 DKMH---VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 225
H + D++S ++I Y + GD ++A +F +D +++AM+ G NGM E
Sbjct: 357 ITEHGIKIDDLLS-TSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATE 415
Query: 226 ARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS----WNTMIT 277
A + F M +K N +++ +++ Y S + + F +M N+ + M+
Sbjct: 416 ANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVD 475
Query: 278 GYGQNGDIAQARKLFDMMP-QRDCVSWAAII 307
G+ G + +A +L MP Q + W A++
Sbjct: 476 MLGRAGRLEEAYELIKSMPMQPNAGVWGALL 506
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 161/317 (50%), Gaps = 14/317 (4%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
++ Y R LA+ FD + +++ VSWN +L GY+ + L +ARR+FD +P+KD V
Sbjct: 143 TGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAV 202
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 144
SWN ++S YA+ G A +F MP K+ SWN L+ YV+ ++ A FD+
Sbjct: 203 SWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKN 262
Query: 145 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 204
+SW ++ G+ K + +A +LF M +D + ++ MI+ Y Q+G A LF Q
Sbjct: 263 GVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLE 322
Query: 205 Q------DVFTWTAMVSGYVQNGMLDE---ARTFFDQMPQK-NEISYNAMVAGYVQSNKM 254
+ D T +++VS Q G ++ + K +++ +++ Y++
Sbjct: 323 RNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDF 382
Query: 255 DMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGY 310
A ++F + ++ S++ MI G G NG +A LF M ++ + V++ ++S Y
Sbjct: 383 AKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAY 442
Query: 311 AQTGHYEEALNMFIEIK 327
+ +G +E F +K
Sbjct: 443 SHSGLVQEGYKCFNSMK 459
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 305 bits (782), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 179/514 (34%), Positives = 279/514 (54%), Gaps = 60/514 (11%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 130
A +LFD +P+ DV N +L G AQ+ ++ ++ +M K +S + +V
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEM-EKRGVSPDRYTFTFVL---- 119
Query: 131 EEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDG 190
+AC + +S+ + GFV + + A LF +A G
Sbjct: 120 -KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILF-----------------HANCG 161
Query: 191 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQ 250
D+ A LFD S + +++++++M +GY +
Sbjct: 162 DLGIASELFDDSA-------------------------------KAHKVAWSSMTSGYAK 190
Query: 251 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 310
K+D A LF+ MP ++ +WN MITG + ++ AR+LFD ++D V+W A+ISGY
Sbjct: 191 RGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGY 250
Query: 311 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG-YETG 369
G+ +EAL +F E++ GE + T LS CA + LE GK++H +++T +
Sbjct: 251 VNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 370 CFVG----NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 425
+VG NAL+ MY KCGSI A +VF G++++D+ +WNT+I G A H + ++ +FE
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFE 369
Query: 426 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 485
M+ + V P+E+T +GV+ ACSH+G +D G +YF M Y++ P+ KHY CM+D+LGRA
Sbjct: 370 EMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRA 429
Query: 486 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLS 545
G+LEEA + +M EP A W LLGA +I+GN ELG+ A E + M SG YVLLS
Sbjct: 430 GQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLS 489
Query: 546 NLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 579
N+YA++G+W +R D V+K TG S +E
Sbjct: 490 NIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 203/453 (44%), Gaps = 60/453 (13%)
Query: 40 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 95
A LFD++P+ D+ N +L G ++ + L+ M ++ D ++ +L ++
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 96 -----NGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNC 150
NG+A + V + + N L+ + + G + A LFD + ++W+
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVK-NALILFHANCGDLGIASELFDDSAKAHKVAWSS 183
Query: 151 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW 210
+ G+ KR + A +LFD+M +D V+WN MI+G + +M A+ LFD+ +DV TW
Sbjct: 184 MTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTW 243
Query: 211 TAMVSGYVQNGMLDEARTFFDQMPQKNE----ISYNAMVAGYVQSNKMDMAREL-FEAMP 265
AM+SGYV G EA F +M E ++ ++++ ++ + L +
Sbjct: 244 NAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILE 303
Query: 266 SRNVSS--------WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 317
+ +VSS WN +I Y + G I +A ++F + RD +W +I G A H E
Sbjct: 304 TASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA-LHHAE 362
Query: 318 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 377
++ MF E++R N TF + C+ ++ G++
Sbjct: 363 GSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRK--------------------- 401
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
YF D++ E ++ + M+ R G ++A M ESMK ++P+ I
Sbjct: 402 --YFSL-----MRDMYN--IEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK---IEPNAI 449
Query: 438 TMVGVLSACSHAGLIDRG---TEYFYSMNKDYS 467
+L AC G ++ G E SM KD S
Sbjct: 450 VWRTLLGACKIYGNVELGKYANEKLLSMRKDES 482
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 161/340 (47%), Gaps = 27/340 (7%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G A +F+ + V++++M SGY + + A LFD+MP +D V+WNVM+TG +
Sbjct: 161 GDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCL 220
Query: 64 RNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNG 119
+ + + AR LFD +KDVV+WNAM+SGY GY EA +F +M H + ++
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 120 LLAAYVHNGRIEEACRLFDSKSDWELIS---------WNCLMGGFVKRKMLGAARKLFDK 170
LL+A G +E RL + +S WN L+ + K + A ++F
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 171 MHVRDVVSWNTMISGYA---QDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
+ RD+ +WNT+I G A +G + + + + T+ ++ +G +DE R
Sbjct: 341 VKDRDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR 400
Query: 228 TFFDQMP-----QKNEISYNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQ 281
+F M + N Y MV ++ +++ A E+M N W T++
Sbjct: 401 KYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKI 460
Query: 282 NGDIAQAR----KLFDMMPQRDCVSWAAIISGYAQTGHYE 317
G++ + KL M + + + + + YA TG ++
Sbjct: 461 YGNVELGKYANEKLLSMR-KDESGDYVLLSNIYASTGQWD 499
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 53/351 (15%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
NA+I + +A +LFD + V+W+ M +GY + ++ +A RLFD MP KD V
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQV 210
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 144
+WN M++G + D ARE+F + K+ ++WN +++ YV+ G +EA
Sbjct: 211 AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEA----------- 259
Query: 145 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL------ 198
LG +++ D DVV+ +++S A GD+ K L
Sbjct: 260 ----------------LGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILE 303
Query: 199 ---FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMD 255
S + W A++ Y + G +D A F + ++ ++N ++ G + + +
Sbjct: 304 TASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVG-LALHHAE 362
Query: 256 MARELFEAMPSRNVSSWNTMITGYG------QNGDIAQARKLFDMMP-----QRDCVSWA 304
+ E+FE M V W +T G +G + + RK F +M + + +
Sbjct: 363 GSIEMFEEMQRLKV--WPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYG 420
Query: 305 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
++ + G EEA MF+E + N + L C +ELGK
Sbjct: 421 CMVDMLGRAGQLEEAF-MFVESMKI--EPNAIVWRTLLGACKIYGNVELGK 468
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 18/279 (6%)
Query: 283 GDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 342
G + A KLFD +P+ D ++ G AQ+ E+ ++++ E+++ G S +R TF+ L
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 343 STCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVV 402
C+ + G HG+VV+ G+ +V NAL+ + CG +G A+++F+ + V
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 403 SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSM 462
+W++M +GYA+ G +A+ +F+ M D++ +++ C +D E F
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPY----KDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 463 NKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL---MRNMPFEPPAASWGALLGASRIHGN 519
+ VT + MI G +EA + MR+ P + +LL A + G+
Sbjct: 236 TEKDVVT-----WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 520 TELGEKAAEMVFKMEPHNSGMYV------LLSNLYAASG 552
E G++ + + +S +YV L ++YA G
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCG 329
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 150/323 (46%), Gaps = 34/323 (10%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
+ G D A+R+F+ MP + V++N MI+G L+ AR+LFD+ ++D+V+WN M++G
Sbjct: 190 KRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISG 249
Query: 62 YVR----NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS- 116
YV LG + + D+ DVV+ ++LS A G + + + + ++S
Sbjct: 250 YVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSS 309
Query: 117 --------WNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLF 168
WN L+ Y G I+ A +F D +L +WN L+ G G+ ++F
Sbjct: 310 SIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSI-EMF 368
Query: 169 DKMHVRDV----VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFT-------WTAMVSGY 217
++M V V++ +I + G + + + F S +D++ + MV
Sbjct: 369 EEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYF--SLMRDMYNIEPNIKHYGCMVDML 426
Query: 218 VQNGMLDEARTFFDQMP-QKNEISYNAMVAGYVQSNKMDMARELFEAMPS-RNVSSWNTM 275
+ G L+EA F + M + N I + ++ +++ + E + S R S + +
Sbjct: 427 GRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYV 486
Query: 276 I-----TGYGQNGDIAQARKLFD 293
+ GQ + + RK+FD
Sbjct: 487 LLSNIYASTGQWDGVQKVRKMFD 509
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 201/659 (30%), Positives = 334/659 (50%), Gaps = 76/659 (11%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNR-------RLGDARRLFDS 77
NA++ Y + RF A +F+ + D+VSWN +L+G+ N+ R+ A +FD+
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDA 174
Query: 78 MP-----------------------------QKDVVSWNAMLSGYAQNGYADEAREVFYQ 108
+ D+V N+ ++ Y+++G AR VF +
Sbjct: 175 FTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDE 234
Query: 109 MPHKNAISWNGLLAAYVHNGRIE-EACRLFDS--KSDWEL--ISWNCLMGGFVKRKMLGA 163
M K+ ISWN LL+ G EA +F + EL +S+ ++ L
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 294
Query: 164 ARKLFDKMHVRDVVSW----NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 219
AR++ R S N ++S Y++ G + K++F Q ++V +WT M+S
Sbjct: 295 ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK- 353
Query: 220 NGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMAREL--------FEAMPSR 267
D+A + F M NE+++ ++ + ++ ++ F + PS
Sbjct: 354 ----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
N+ IT Y + + A+K F+ + R+ +SW A+ISG+AQ G EAL MF+
Sbjct: 410 G----NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA 465
Query: 328 RDGESLNRSTFSCALSTCA---DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 384
+ N TF L+ A DI+ ++ G++ H ++K G + V +ALL MY K G
Sbjct: 466 AETMP-NEYTFGSVLNAIAFAEDIS-VKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRG 523
Query: 385 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 444
+I E+ VF + +K+ W ++I+ Y+ HG + + +F M V PD +T + VL+
Sbjct: 524 NIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLT 583
Query: 445 ACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPA 504
AC+ G++D+G E F M + Y++ PS +HY+CM+D+LGRAGRL+EA++LM +P P
Sbjct: 584 ACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGE 643
Query: 505 ASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 564
+ ++LG+ R+HGN ++G K AE+ +M+P SG YV + N+YA W A +R M
Sbjct: 644 SMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAM 703
Query: 565 RDVGVQKVTGYSWVEVQN-----KIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVS 618
R V K G+SW++V + + F+ GD HP+ D IY +E + L+M EG V+
Sbjct: 704 RKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKVA 762
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 195/464 (42%), Gaps = 104/464 (22%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFS-----LARDLFDKMPQRDLVSWN 56
R+G A RVF+ M + +S+N+++SG + F + RD+ + + D VS+
Sbjct: 221 RSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFT 280
Query: 57 VMLTGYVRNRRLGDARRLFDSMPQKDVVSW----NAMLSGYAQNGYADEAREVFYQMPHK 112
++T L AR++ ++ S N ++S Y++ G + + VF+QM +
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 340
Query: 113 NAISWN------------------------------GLLAAYVHNGRIEEACRLFDSKSD 142
N +SW GL+ A N +I+E ++
Sbjct: 341 NVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 143 WELIS----WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 198
+S N + + K + L A+K F+ + R+++SWN MISG+AQ+G +A +
Sbjct: 401 TGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKM 460
Query: 199 F-----DQSPHQDVF-----------------------------------TWTAMVSGYV 218
F + P++ F +A++ Y
Sbjct: 461 FLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYA 520
Query: 219 QNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNT 274
+ G +DE+ F++M QKN+ + ++++ Y + LF M NV+ ++ +
Sbjct: 521 KRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLS 580
Query: 275 MITGYGQNGDIAQARKLFDMM-------PQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
++T + G + + ++F+MM P + ++ ++ + G +EA + E+
Sbjct: 581 VLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE--HYSCMVDMLGRAGRLKEAEELMSEVP 638
Query: 328 -RDGESLNRSTF-SCAL----STCADIA--ALELGKQIHGQVVK 363
GES+ +S SC L A +A A+E+ ++ G V+
Sbjct: 639 GGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQ 682
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 105/233 (45%), Gaps = 21/233 (9%)
Query: 288 ARKLFDMMPQRDCV-SWAAIISGYAQTGHYEEALNMF---IEIKRDGESLNRSTFSCALS 343
A KLFD QR+ S IS + AL++F +++ G ++ T AL
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 344 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 403
C L+ G QIHG +G+ + V NA++GMY K G A +FE + + DVVS
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 404 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA-----GLIDRGTEY 458
WNT+++G+ + + AL MK+ GV D T LS C + GL + T
Sbjct: 145 WNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 459 FYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
+ D V S I + R+G A+ + M F+ SW +LL
Sbjct: 202 KTGLESDLVVGNS------FITMYSRSGSFRGARRVFDEMSFK-DMISWNSLL 247
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 202/731 (27%), Positives = 352/731 (48%), Gaps = 72/731 (9%)
Query: 31 YLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV----VSW 86
Y + +F A +LF + D +SW +M++ V R+ +A + + M + V ++
Sbjct: 169 YSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF 228
Query: 87 NAMLSGYA----QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSD 142
+L + + G + + +P N + L+ Y ++E+A R+ +S +
Sbjct: 229 VKLLGASSFLGLEFGKTIHSNIIVRGIP-LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGE 287
Query: 143 WELISWNCLMGGFVKRKMLGAARKLFDKMH--------------------VRDV-----V 177
++ W ++ GFV+ A F +M VR + +
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI 347
Query: 178 SWNTMISGYAQDGDMS---------------QAKNLFDQSPHQDVFTWTAMVSGYVQNGM 222
T+ G+ D+ +A +F +V +WT ++ G V +G
Sbjct: 348 HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGF 407
Query: 223 LDEARTFFDQMPQKNEISYNAM-VAGYVQS-NKMDMARELFEA---MPSRNVSS----WN 273
+ + +M K E+ N + ++G +++ +K+ R + E + R+V N
Sbjct: 408 VQDCFGLLMEMV-KREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGN 466
Query: 274 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 333
+++ Y + + A + M +RD +++ ++++ + + G +E AL++ + DG +
Sbjct: 467 SLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRM 526
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
++ + +S A++ ALE GK +H VK+G+ V N+L+ MY KCGS+ +A VF
Sbjct: 527 DQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVF 586
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 453
E I DVVSWN +++G A +GF AL FE M+ +PD +T + +LSACS+ L D
Sbjct: 587 EEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTD 646
Query: 454 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 513
G EYF M K Y++ P +HY ++ +LGRAGRLEEA ++ M +P A + LL A
Sbjct: 647 LGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRA 706
Query: 514 SRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVT 573
R GN LGE A + P + +Y+LL++LY SG+ A R+ M + + K
Sbjct: 707 CRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKL 766
Query: 574 GYSWVEVQNKIHKFTVGDCFHPEK-DRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEK 632
G S VEVQ K+H F D +K + IYA +E + +++R G
Sbjct: 767 GKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG------------SPYRG 814
Query: 633 EHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHR 692
+HS K AV +G + P+ V+KN +C+DCH + ++++V + I +RD ++
Sbjct: 815 NENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQ 874
Query: 693 FHHFNEGICSC 703
H F G CSC
Sbjct: 875 VHIFKNGECSC 885
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 177/388 (45%), Gaps = 49/388 (12%)
Query: 118 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH----- 172
N LL+ Y+ I A +LFD S + +W ++ F K + +A LF++M
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 173 ---------------VRDV-------------------VSWNTMISGYAQDGDMSQAKNL 198
+RD+ V +++ Y++ G +A L
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 199 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGY----VQ 250
F + D +WT M+S V EA F+ +M + NE ++ ++ ++
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLE 241
Query: 251 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 310
K + + +P NV +++ Y Q + A ++ + ++D W +++SG+
Sbjct: 242 FGKTIHSNIIVRGIP-LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF 300
Query: 311 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 370
+ +EA+ F+E++ G N T+S LS C+ + +L+ GKQIH Q +K G+E
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDST 360
Query: 371 FVGNALLGMYFKC-GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 429
VGNAL+ MY KC S EA+ VF + +VVSW T+I G HGF + + M
Sbjct: 361 DVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK 420
Query: 430 IGVKPDEITMVGVLSACSHAGLIDRGTE 457
V+P+ +T+ GVL ACS + R E
Sbjct: 421 REVEPNVVTLSGVLRACSKLRHVRRVLE 448
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 141/595 (23%), Positives = 260/595 (43%), Gaps = 69/595 (11%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM------ 78
N ++S YL+ AR LFD+M R + +W VM++ + +++ A LF+ M
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 79 PQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEAC 134
P + VV A L + G + V N++ + L Y G+ +EAC
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGS--VIKTGFEGNSVVGSSLSDLYSKCGQFKEAC 179
Query: 135 RLFDSKSDWELISWNCLMGGFVKR--------------------------KMLGAA---- 164
LF S + + ISW ++ V K+LGA+
Sbjct: 180 ELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG 239
Query: 165 ----RKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 216
+ + + VR +VV +++ Y+Q M A + + S QDVF WT++VSG
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 217 YVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRN 268
+V+N EA F +M Q N +Y+A+++ +D +++ + +
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Query: 269 VSSWNTMITGYGQ-NGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE-I 326
N ++ Y + + +A ++F M + VSW +I G G ++ + +E +
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
KR+ E N T S L C+ + + +IH +++ + VGN+L+ Y +
Sbjct: 420 KREVEP-NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKV 478
Query: 387 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
A +V ++ +D +++ +++ + G + AL V M G++ D++++ G +SA
Sbjct: 479 DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 447 SHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 505
++ G ++ G + YS+ +S S ++D+ + G LE+A+ + + P
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASV--LNSLVDMYSKCGSLEDAKKVFEEIA-TPDVV 595
Query: 506 SWGALLGASRIHGNTELGEKA-AEMVFK-MEPHNSGMYVLLSNLYAASGRWADAG 558
SW L+ +G A EM K EP + +LLS ++GR D G
Sbjct: 596 SWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA--CSNGRLTDLG 648
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 99/184 (53%)
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
N+ N +++ Y + I ARKLFD M R +W +IS + ++ + AL++F E+
Sbjct: 57 NLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMM 116
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 387
G N TFS + +CA + + G ++HG V+KTG+E VG++L +Y KCG
Sbjct: 117 ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFK 176
Query: 388 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
EA ++F ++ D +SW MI+ ++AL + M GV P+E T V +L A S
Sbjct: 177 EACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASS 236
Query: 448 HAGL 451
GL
Sbjct: 237 FLGL 240
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 130/620 (20%), Positives = 255/620 (41%), Gaps = 77/620 (12%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGY 62
+ A+RV N+ + + +++SG++RN R A F +M Q + +++ +L+
Sbjct: 276 EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Query: 63 VRNRRLGDARRLFDSMPQ------KDVVSWNAMLSGYAQNGYAD-EAREVFYQMPHKNAI 115
R L +++ + DV NA++ Y + ++ EA VF M N +
Sbjct: 336 SAVRSLDFGKQIHSQTIKVGFEDSTDV--GNALVDMYMKCSASEVEASRVFGAMVSPNVV 393
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK--------RKMLGAARKL 167
SW L+ V +G +++ L E+ + G ++ R++L L
Sbjct: 394 SWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYL 453
Query: 168 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
+ ++V N+++ YA + A N+ +D T+T++V+ + + G + A
Sbjct: 454 LRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMAL 513
Query: 228 TFFDQM----PQKNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGY 279
+ + M + +++S ++ ++ + L ++ S S N+++ Y
Sbjct: 514 SVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMY 573
Query: 280 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 339
+ G + A+K+F+ + D VSW ++SG A G AL+ F E++ + TF
Sbjct: 574 SKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFL 633
Query: 340 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 399
LS C++ +LG + + QV+K Y E
Sbjct: 634 ILLSACSNGRLTDLGLE-YFQVMKKIYNI-----------------------------EP 663
Query: 400 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF 459
V + ++ R G ++A V E+M +KP+ + +L AC + G + G +
Sbjct: 664 QVEHYVHLVGILGRAGRLEEATGVVETMH---LKPNAMIFKTLLRACRYRGNLSLGEDM- 719
Query: 460 YSMNKDYSVTPSSKH-YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG 518
NK ++ PS Y + DL +G+ E AQ RN+ E + LG S +
Sbjct: 720 --ANKGLALAPSDPALYILLADLYDESGKPELAQK-TRNLMTEKRLSKK---LGKSTVEV 773
Query: 519 NTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADA--GNMRSRMRDVGVQKVTGYS 576
++ +E V +++ N G+Y + ++ R+ GN + V G+
Sbjct: 774 QGKVHSFVSEDVTRVDKTN-GIYAEIESIKEEIKRFGSPYRGNENASFHSAKQAVVYGFI 832
Query: 577 WVEVQNKIH----KFTVGDC 592
+ + +H K DC
Sbjct: 833 YASPEAPVHVVKNKILCKDC 852
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 18/211 (8%)
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
LS C ++ +G IH V+K G + N LL +Y K I A +F+ + + V
Sbjct: 31 LSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTV 89
Query: 402 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYS 461
+W MI+ + + AL +FE M G P+E T V+ +C+ I G S
Sbjct: 90 FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS 149
Query: 462 MNKD----YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW----GALLGA 513
+ K SV SS + DL + G+ +EA +L ++ SW +L+GA
Sbjct: 150 VIKTGFEGNSVVGSS-----LSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISSLVGA 203
Query: 514 SRIHGNTELGEKAAEMVFKMEPHNSGMYVLL 544
+ E + +EMV P N +V L
Sbjct: 204 RKWR---EALQFYSEMVKAGVPPNEFTFVKL 231
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 307/592 (51%), Gaps = 29/592 (4%)
Query: 17 PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL----VSWNVMLTGYVRNRRLGDAR 72
PR + ++++ MI Y N A DL+ KM + ++ +L R + D +
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 73 RLFDSMPQKDVVS----WNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNG 128
+ + D + A++ YA+ G + A +VF +MP ++ ++WN +++ + +
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 129 RIEEACRLFDSKSDWELISWN--CLMGGFVKRKMLGAAR--KLFDKMHVR-----DVVSW 179
+ + LF + +S N ++G F GA R K R D+V
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 239
++ YA+ + A+ +FD ++ TW+AM+ GYV+N M+ EA F QM + +
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV 303
Query: 240 SYNAMVA------GYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQAR 289
+ VA G + + R + +A +++ NT+I+ Y + G + A
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAF 363
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
+ F + +D +S+ ++I+G EE+ +F E++ G + +T L+ C+ +A
Sbjct: 364 RQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLA 423
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 409
AL G HG V GY + NAL+ MY KCG + A VF+ + ++D+VSWNTM+
Sbjct: 424 ALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLF 483
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK-DYSV 468
G+ HG GK+AL +F SM+ GV PDE+T++ +LSACSH+GL+D G + F SM++ D++V
Sbjct: 484 GFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNV 543
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 528
P HY CM DLL RAG L+EA D + MPFEP G LL A + N ELG + ++
Sbjct: 544 IPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSK 603
Query: 529 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEV 580
+ + + VLLSN Y+A+ RW DA +R + G+ K GYSWV+V
Sbjct: 604 KMQSLGETTESL-VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 171/410 (41%), Gaps = 104/410 (25%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNV---- 57
+ G + A++VF+ MP+R V++NAMISG+ + + LF M + D +S N+
Sbjct: 150 KCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIV 209
Query: 58 ------------------------------------MLTGYVRNRRLGDARRLFDSMPQK 81
+L Y +++ + ARR+FD +K
Sbjct: 210 GMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKK 269
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
+ V+W+AM+ GY +N EA EVF+QM ++ N + V G I C F S
Sbjct: 270 NEVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLS 325
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 201
+ + GF + D+ NT+IS YA+ G + A F +
Sbjct: 326 GGRCVHCYAVKAGF-----------------ILDLTVQNTIISFYAKYGSLCDAFRQFSE 368
Query: 202 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK------------------------- 236
+DV ++ ++++G V N +E+ F +M
Sbjct: 369 IGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Query: 237 --------------NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQN 282
N NA++ Y + K+D+A+ +F+ M R++ SWNTM+ G+G +
Sbjct: 429 SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIH 488
Query: 283 GDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKR 328
G +A LF+ M + D V+ AI+S + +G +E +F + R
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 125/316 (39%), Gaps = 81/316 (25%)
Query: 186 YAQDGDMSQAKNLFDQSPHQDV--FTWTAMVSGYVQNGMLDEARTFFDQM------PQKN 237
YA ++ A+++FD+ PH + W M+ Y N ++A + +M P K
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 238 EISY---------------------------------NAMVAGYVQSNKMDMARELFEAM 264
+ A+V Y + +++MA ++F+ M
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 265 PSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 324
P R++ +WN MI+G+ + C++ + + +F+
Sbjct: 165 PKRDMVAWNAMISGFSLHC----------------CLT---------------DVIGLFL 193
Query: 325 EIKR-DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 383
+++R DG S N ST AL GK +HG + G+ V +L +Y K
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253
Query: 384 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 443
I A VF+ +K+ V+W+ MI GY + K+A VF M + D + MV +
Sbjct: 254 KCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPV 309
Query: 444 SACSHAGLIDRGTEYF 459
+ GLI G F
Sbjct: 310 A----IGLILMGCARF 321
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNV 57
+ G D A RVF+TM +R VS+N M+ G+ + A LF+ M + D V+
Sbjct: 456 KCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLA 515
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKD------VVSWNAMLSGYAQNGYADEAREVFYQMPH 111
+L+ + + + ++LF+SM + D + +N M A+ GY DEA + +MP
Sbjct: 516 ILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPF 575
Query: 112 KNAISWNGLL 121
+ I G L
Sbjct: 576 EPDIRVLGTL 585
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 258/471 (54%), Gaps = 44/471 (9%)
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 239
N+++ YA G + +FD+ P +DV +W ++S YV NG ++A F +M Q++ +
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 240 SY---------------------------------------NAMVAGYVQSNKMDMAREL 260
+ NA+V + + +D AR +
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAV 204
Query: 261 FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 320
F++M +NV W +M+ GY G I +AR LF+ P +D V W A+++GY Q ++EAL
Sbjct: 205 FDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEAL 264
Query: 321 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 380
+F ++ G + L+ CA ALE GK IHG + + VG AL+ MY
Sbjct: 265 ELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMY 324
Query: 381 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 440
KCG I A +VF I+E+D SW ++I G A +G +AL ++ M+ +GV+ D IT V
Sbjct: 325 AKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFV 384
Query: 441 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL---MRN 497
VL+AC+H G + G + F+SM + ++V P S+H +C+IDLL RAG L+EA++L MR
Sbjct: 385 AVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRG 444
Query: 498 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADA 557
E + +LL A+R +GN ++ E+ AE + K+E +S + LL+++YA++ RW D
Sbjct: 445 ESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDV 504
Query: 558 GNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCF--HPEKDRIYAFLEE 606
N+R +M+D+G++K G S +E+ H+F VGD HP+ D I + L +
Sbjct: 505 TNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQ 555
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 208/473 (43%), Gaps = 60/473 (12%)
Query: 20 SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWN----VMLTGYVRNRRLGDARRL- 74
S + YN M+ F+ LF ++ + L N V+L R R++ + ++
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 75 ---FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIE 131
+ + D N+++ YA G + +VF +MP ++ +SWNGL+++YV NGR E
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 132 EACRLFDSKSDWELISW---------------------------------------NCLM 152
+A +F S + + N L+
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALV 189
Query: 153 GGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 212
F K L AR +FD M ++V W +M+ GY G + +A+ LF++SP +DV WTA
Sbjct: 190 DMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTA 249
Query: 213 MVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN 268
M++GYVQ DEA F M + + +++ G Q+ ++ + + +
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENR 309
Query: 269 VS----SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 324
V+ ++ Y + G I A ++F + +RD SW ++I G A G AL+++
Sbjct: 310 VTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYY 369
Query: 325 EIKRDGESLNRSTFSCALSTCADIAALELGKQI-HGQVVKTGYETGCFVGNALLGMYFKC 383
E++ G L+ TF L+ C + G++I H + + + L+ + +
Sbjct: 370 EMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRA 429
Query: 384 GSIGEANDVFEGI----EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 432
G + EA ++ + + +E V + ++++ +G K A V E ++ + V
Sbjct: 430 GLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 198/450 (44%), Gaps = 47/450 (10%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWN------- 56
G + +VF+ MP+R VS+N +IS Y+ N RF A +F +M Q + ++
Sbjct: 95 GKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVST 154
Query: 57 VMLTGYVRNRRLGD-ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
+ ++N +G+ R + + V NA++ + + G D+AR VF M KN
Sbjct: 155 LSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK 214
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 175
W ++ YV GRI+EA LF+ +++ W +M G+V+ A +LF M
Sbjct: 215 CWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAG 274
Query: 176 VVSWN----TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFD 231
+ N ++++G AQ G + Q K W + GY+ +E R D
Sbjct: 275 IRPDNFVLVSLLTGCAQTGALEQGK-------------W---IHGYI-----NENRVTVD 313
Query: 232 QMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKL 291
+ + A+V Y + ++ A E+F + R+ +SW ++I G NG +A L
Sbjct: 314 K------VVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDL 367
Query: 292 FDMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEI-KRDGESLNRSTFSCALSTCA 346
+ M + D +++ A+++ G E +F + +R SC +
Sbjct: 368 YYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLC 427
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV--VSW 404
L+ +++ ++ ET V +LL G++ A V E +E+ +V S
Sbjct: 428 RAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSA 487
Query: 405 NTMIAG-YARHGFGKQALMVFESMKTIGVK 433
+T++A YA + V MK +G++
Sbjct: 488 HTLLASVYASANRWEDVTNVRRKMKDLGIR 517
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 131/271 (48%), Gaps = 11/271 (4%)
Query: 303 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 362
+ ++ A + + L +F E++ G + T L + + + G+++HG V
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 363 KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALM 422
K G E +V N+L+GMY G I + VF+ + ++DVVSWN +I+ Y +G + A+
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 423 VFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL 481
VF+ M + +K DE T+V LSACS ++ G + + ++ + S + ++D+
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNALVDM 191
Query: 482 LGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE-KAAEMVFKMEP-HNSG 539
+ G L++A+ + +M + W S + G G A ++F+ P +
Sbjct: 192 FCKCGCLDKARAVFDSMR-DKNVKCW-----TSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 540 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
++ + N Y R+ +A + M+ G++
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 314/607 (51%), Gaps = 38/607 (6%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
+ GH A+ VF+ +P S VS+ M+SGY ++ A ++F +M + N +T
Sbjct: 297 KCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTS 356
Query: 62 YV----RNRRLGDARRL----FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM---P 110
+ R + +A ++ F S D A++S Y+++G D + +VF +
Sbjct: 357 VISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQ 416
Query: 111 HKNAISWNGLLAAYVHNGRIEEACRLF----------DSKSDWELIS-WNCLMGGFVKRK 159
+N + N ++ ++ + + +A RLF D S L+S +CL G ++
Sbjct: 417 RQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG---KQ 471
Query: 160 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 219
+ G K V D+ +++ + Y++ G + ++ LF P +D W +M+SG+ +
Sbjct: 472 VHGYTLK---SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 220 NGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSS 271
G L EA F +M +E + A++ + +E+ A + +
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 331
+ ++ Y + G + AR+++D +P+ D VS +++ISGY+Q G ++ +F ++ G
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF 648
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
+++ S L A LG Q+H + K G T VG++LL MY K GSI +
Sbjct: 649 TMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCK 708
Query: 392 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
F I D+++W +IA YA+HG +AL V+ MK G KPD++T VGVLSACSH GL
Sbjct: 709 AFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGL 768
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
++ + SM KDY + P ++HY CM+D LGR+GRL EA+ + NM +P A WG LL
Sbjct: 769 VEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLL 828
Query: 512 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 571
A +IHG ELG+ AA+ ++EP ++G Y+ LSN+ A G W + R M+ GVQK
Sbjct: 829 AACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQK 888
Query: 572 VTGYSWV 578
G+S V
Sbjct: 889 EPGWSSV 895
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 276/564 (48%), Gaps = 82/564 (14%)
Query: 26 AMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QK 81
+++S Y + + A LFD +PQ D+VS N+M++GY ++R ++ R F M +
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA 148
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW---------NGLLAAYVHNGRIEE 132
+ +S+ +++S + A +A +F ++ + I + L+ + N R E+
Sbjct: 149 NEISYGSVISACS----ALQA-PLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 133 ACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV----RDVVSWNTMISGYA- 187
A ++F + WN ++ G ++ + GA LF +M V D +++++++ A
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 188 ----QDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNA 243
+ G + QA+ + + +DVF TA+V Y + G + EA F ++P + +S+
Sbjct: 264 LEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 244 MVAGYVQSNKMDMARELFEAM---------------------PS-----RNVSSW----- 272
M++GY +SN A E+F+ M PS V +W
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 273 --------NTMITGYGQNGDIAQARKLF---DMMPQRDCVSWAAIISGYAQTGHYEEALN 321
+I+ Y ++GDI + ++F D + +++ V+ +I+ ++Q+ +A+
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIR 439
Query: 322 MFIEIKRDGESLNRSTFS-CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 380
+F + ++G L FS C+L + D L LGKQ+HG +K+G VG++L +Y
Sbjct: 440 LFTRMLQEG--LRTDEFSVCSLLSVLD--CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLY 495
Query: 381 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 440
KCGS+ E+ +F+GI KD W +MI+G+ +G+ ++A+ +F M G PDE T+
Sbjct: 496 SKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLA 555
Query: 441 GVLSACSHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 499
VL+ CS + RG E + Y++ + + ++++ + G L+ A+ + +P
Sbjct: 556 AVLTVCSSHPSLPRGKEIHGYTLRA--GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 500 FEPPAASWGALLGASRIHGNTELG 523
P + + G S+ HG + G
Sbjct: 614 ELDPVSCSSLISGYSQ-HGLIQDG 636
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 150/642 (23%), Positives = 275/642 (42%), Gaps = 117/642 (18%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQ 80
+A+I + +N RF A +F ++ WN ++ G +RN+ G LF M +
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 81 KDVVSWNAMLSGYA-----QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACR 135
D +++++L+ A + G +AR + + ++ ++ Y G + EA
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAME 306
Query: 136 LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGD 191
+F + ++SW ++ G+ K +A ++F +M V + ++IS +
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366
Query: 192 MSQAKN----LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP--QKNEISYNAMV 245
+ +A +F + D A++S Y ++G +D + F+ + Q+ I N M+
Sbjct: 367 VCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI-VNVMI 425
Query: 246 AGYVQSNKMDMARELFEAMPSR------------------------------------NV 269
+ QS K A LF M ++
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDL 485
Query: 270 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
+ +++ T Y + G + ++ KLF +P +D WA++ISG+ + G+ EA+ +F E+ D
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 330 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 389
G S + ST + L+ C+ +L GK+IHG ++ G + G +G+AL+ MY KCGS+ A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 390 NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS-- 447
V++ + E D VS +++I+GY++HG + ++F M G D + +L A +
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 448 ---------HA------------------------GLIDRGTEYFYSMNKDYSVTPSSKH 474
HA G ID + F +N P
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING-----PDLIA 720
Query: 475 YTCMIDLLGRAGRLEEA---QDLMRNMPFEP---------PAASWGALLGASRIHGNTEL 522
+T +I + G+ EA +LM+ F+P A S G L+ S H N+ +
Sbjct: 721 WTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV 780
Query: 523 GEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 564
+ + +EP N YV + + SGR +A + + M
Sbjct: 781 KD------YGIEPENR-HYVCMVDALGRSGRLREAESFINNM 815
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 221/492 (44%), Gaps = 55/492 (11%)
Query: 44 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAR 103
FD + L+SW Y + + DA +LFD++PQ DVVS N M+SGY Q+ +E+
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 104 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGA 163
F +M + G A + G + AC + EL+ + + G+ +++ +
Sbjct: 136 RFFSKM------HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 164 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 223
A +I ++++ A +F S +V+ W +++G ++N
Sbjct: 190 A-----------------LIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNY 232
Query: 224 DEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAM---PSRNVSSWNTMI 276
F +M + + +Y++++A K+ + + + + +V ++
Sbjct: 233 GAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIV 292
Query: 277 TGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRS 336
Y + G +A+A ++F +P VSW ++SGY ++ AL +F E++ G +N
Sbjct: 293 DLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNC 352
Query: 337 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE-- 394
T + +S C + + Q+H V K+G+ V AL+ MY K G I + VFE
Sbjct: 353 TVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
Query: 395 -GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA--CSHAGL 451
I+ +++V N MI +++ +A+ +F M G++ DE ++ +LS C + G
Sbjct: 413 DDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGK 470
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
G + D +V S + L + G LEE+ L + +PF+ A W
Sbjct: 471 QVHGYTLKSGLVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIPFKDNAC-W---- 519
Query: 512 GASRIHGNTELG 523
AS I G E G
Sbjct: 520 -ASMISGFNEYG 530
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 135/307 (43%), Gaps = 39/307 (12%)
Query: 261 FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 320
F+ ++++ SW Y +G +A A KLFD +PQ D VS +ISGY Q +EE+L
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 321 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 380
F ++ G N ++ +S C+ + A + + +K GY V +AL+ ++
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 381 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 440
K +A VF +V WNT+IAG R+ +F M KPD T
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYS 255
Query: 441 GVLSACS-----------HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE 489
VL+AC+ A +I G E + T ++DL + G +
Sbjct: 256 SVLAACASLEKLRFGKVVQARVIKCGAEDVFVC-------------TAIVDLYAKCGHMA 302
Query: 490 EAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYV---LLSN 546
EA ++ +P P SW +L G T+ + + + E +SG+ + +++
Sbjct: 303 EAMEVFSRIP-NPSVVSWTVMLS-----GYTKSNDAFSALEIFKEMRHSGVEINNCTVTS 356
Query: 547 LYAASGR 553
+ +A GR
Sbjct: 357 VISACGR 363
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/652 (29%), Positives = 323/652 (49%), Gaps = 57/652 (8%)
Query: 10 LRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLG 69
+R + ++VS N +++ Y ++ AR++FD+M +R++ SWN ++ YV+ +
Sbjct: 12 IRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVK 71
Query: 70 DARRLFDS-MPQKDVVSWNAMLSGYAQ-NGYADEAREVFYQMPHKN---------AISWN 118
+AR LF+S ++D++++N +LSG+A+ +G EA E+F +M K ++
Sbjct: 72 EARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTM 131
Query: 119 GLLAAYVHNGRIEEACR--LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-- 174
L+A + N E L + +D + + L+ + K +F+ V
Sbjct: 132 VKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFV 191
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQSPH-QDVFTWTAMVSGYVQNGMLDEARTFFDQM 233
D V+ N MI+ Y ++GD+ +A ++F ++P D +W +++GY QNG +EA M
Sbjct: 192 DSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM 251
Query: 234 PQK---------------------------------------NEISYNAMVAGYVQSNKM 254
+ N+ + +V Y + M
Sbjct: 252 EENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNM 311
Query: 255 DMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG 314
A N+ S ++MI GY G + +A++LFD + +++ V W A+ GY
Sbjct: 312 KYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLR 371
Query: 315 HYEEALNMFIE-IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 373
+ L + I + + + L C+ A +E GK+IHG ++TG +
Sbjct: 372 QPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV 431
Query: 374 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVK 433
A + MY KCG++ A +F+ E+D V +N MIAG A HG ++ FE M G K
Sbjct: 432 TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFK 491
Query: 434 PDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQD 493
PDEIT + +LSAC H GL+ G +YF SM + Y+++P + HYTCMIDL G+A RL++A +
Sbjct: 492 PDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIE 551
Query: 494 LMRNM-PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASG 552
LM + E A GA L A + NTEL ++ E + +E N Y+ ++N YA+SG
Sbjct: 552 LMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSG 611
Query: 553 RWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFL 604
RW + +R +MR ++ +G SW + + H FT D H E + IYA L
Sbjct: 612 RWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 181/606 (29%), Positives = 301/606 (49%), Gaps = 54/606 (8%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 81
++++ YL+ + A+ LFD+MP+RD V WN ++ GY RN DA +LF M Q+
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 82 ------------------------------------DVVSWNAMLSGYAQNGYADEAREV 105
D NA++S Y++ A +
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 106 FYQMPHKNAISWNGLLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKML 161
F +M K+ +SWN ++ AY +G EEA +F+ + ++ L+ V + L
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL 268
Query: 162 GAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 221
+ V D+ +++ Y++ G + A+ L+ + + T++VS Y + G
Sbjct: 269 HCL--VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKG 326
Query: 222 MLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWN 273
+D A +F + Q + ++ ++ G +S+ +D+ L ++ N
Sbjct: 327 DMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN 386
Query: 274 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 333
+IT Y + D+ LF+ + + +SW ++ISG Q+G A +F ++ G L
Sbjct: 387 GLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLL 446
Query: 334 -NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 392
+ T + L+ C+ + L LGK++HG ++ +E FV AL+ MY KCG+ +A V
Sbjct: 447 PDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESV 506
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI 452
F+ I+ +WN+MI+GY+ G +AL + M+ G+KPDEIT +GVLSAC+H G +
Sbjct: 507 FKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFV 566
Query: 453 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
D G F +M K++ ++P+ +HY M+ LLGRA EA L+ M +P +A WGALL
Sbjct: 567 DEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLS 626
Query: 513 ASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 572
A IH E+GE A +F ++ N G+YVL+SNLYA W D +R+ M+D G
Sbjct: 627 ACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGY 686
Query: 573 TGYSWV 578
G S +
Sbjct: 687 LGVSQI 692
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 101/179 (56%)
Query: 267 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 326
R V +++ Y + G + A+ LFD MP+RD V W A+I GY++ G+ +A +FI +
Sbjct: 83 RFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVM 142
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
+ G S + +T L C + G+ +HG K+G E V NAL+ Y KC +
Sbjct: 143 LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAEL 202
Query: 387 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 445
G A +F +++K VSWNTMI Y++ G ++A+ VF++M V+ +T++ +LSA
Sbjct: 203 GSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 8/215 (3%)
Query: 320 LNMFIEIKRDGESLNRSTFSCAL-STCADIAALELG-KQIHGQVVKTGYETGCFVGNALL 377
+ +F ++ R + N T S L +T + +L +Q+ + K+G + +V +LL
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
+Y K G + A +F+ + E+D V WN +I GY+R+G+ A +F M G P
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSAT 152
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
T+V +L C G + +G + + + S+ +I + L A+ L R
Sbjct: 153 TLVNLLPFCGQCGFVSQGRS-VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 498 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFK 532
M + SW ++GA + + L E+A VFK
Sbjct: 212 MK-DKSTVSWNTMIGA---YSQSGLQEEAIT-VFK 241
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/480 (33%), Positives = 267/480 (55%), Gaps = 23/480 (4%)
Query: 139 SKSDWELISWNCLMGG-----FVKRKM---------LGAARKLFDKMHVRDVVSWNTMIS 184
S+++W+ I+ + ++ G F+ KM + A +LF+++ +V +N++I
Sbjct: 22 SRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIR 81
Query: 185 GYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEARTFFDQM----PQ 235
Y + ++ Q + D FT+ M G + + P+
Sbjct: 82 AYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPR 141
Query: 236 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 295
+ ++ NA++ Y++ + + A ++F+ M R+V SWN++++GY + G + +A+ LF +M
Sbjct: 142 FHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLM 201
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
+ VSW A+ISGY G Y EA++ F E++ G + + L +CA + +LELGK
Sbjct: 202 LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGK 261
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 415
IH + G+ V NAL+ MY KCG I +A +F +E KDV+SW+TMI+GYA HG
Sbjct: 262 WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHG 321
Query: 416 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 475
A+ F M+ VKP+ IT +G+LSACSH G+ G YF M +DY + P +HY
Sbjct: 322 NAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHY 381
Query: 476 TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEP 535
C+ID+L RAG+LE A ++ + MP +P + WG+LL + R GN ++ A + + ++EP
Sbjct: 382 GCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEP 441
Query: 536 HNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHP 595
+ G YVLL+N+YA G+W D +R +R+ ++K G S +EV N + +F GD P
Sbjct: 442 EDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 192/446 (43%), Gaps = 85/446 (19%)
Query: 100 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS--KSDWEL------------ 145
D A +F Q+ + N +N ++ AY HN + R++ + +EL
Sbjct: 59 DYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKS 118
Query: 146 --------------------------ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 179
++ N L+ ++K L A K+FD+M+ RDV+SW
Sbjct: 119 CASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISW 178
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----Q 235
N+++SGYA+ G M +AK LF + + +WTAM+SGY G EA FF +M +
Sbjct: 179 NSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE 238
Query: 236 KNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKL 291
+EIS +++ Q +++ + + R N +I Y + G I+QA +L
Sbjct: 239 PDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 292 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
F M +D +SW+ +ISGYA G+ A+ F E++R N TF LS C+ +
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMW 358
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
+ G + + +++ Y+ E + + +I
Sbjct: 359 QEGLR-YFDMMRQDYQI-----------------------------EPKIEHYGCLIDVL 388
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
AR G ++A+ E KT+ +KPD +LS+C G +D +M+ + P
Sbjct: 389 ARAGKLERAV---EITKTMPMKPDSKIWGSLLSSCRTPGNLDVA---LVAMDHLVELEPE 442
Query: 472 SK-HYTCMIDLLGRAGRLEEAQDLMR 496
+Y + ++ G+ E+ L +
Sbjct: 443 DMGNYVLLANIYADLGKWEDVSRLRK 468
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 159/324 (49%), Gaps = 21/324 (6%)
Query: 17 PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFD 76
PR V+ NA+I Y++ A +FD+M +RD++SWN +L+GY R ++ A+ LF
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 77 SMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIE- 131
M K +VSW AM+SGY G EA + F +M + IS +L + G +E
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 132 -EACRLFDSKSDW--ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQ 188
+ L+ + + + N L+ + K ++ A +LF +M +DV+SW+TMISGYA
Sbjct: 260 GKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAY 319
Query: 189 DGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS---- 240
G+ A F++ V T+ ++S GM E +FD M Q +I
Sbjct: 320 HGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE 379
Query: 241 -YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITGYGQNGDIAQARKLFDMMPQ- 297
Y ++ ++ K++ A E+ + MP + S W ++++ G++ A D + +
Sbjct: 380 HYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVEL 439
Query: 298 --RDCVSWAAIISGYAQTGHYEEA 319
D ++ + + YA G +E+
Sbjct: 440 EPEDMGNYVLLANIYADLGKWEDV 463
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 103/243 (42%), Gaps = 49/243 (20%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQR----- 50
R G A +F+ M ++ VS+ AMISGY + A D F +M P
Sbjct: 187 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 51 -----------DLVSW-----------------NVMLTGYVRNRRLGDARRLFDSMPQKD 82
+L W N ++ Y + + A +LF M KD
Sbjct: 247 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKD 306
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFD 138
V+SW+ M+SGYA +G A A E F +M N I++ GLL+A H G +E R FD
Sbjct: 307 VISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD 366
Query: 139 -SKSDWELIS----WNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDM 192
+ D+++ + CL+ + L A ++ M ++ D W +++S G++
Sbjct: 367 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 426
Query: 193 SQA 195
A
Sbjct: 427 DVA 429
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 249/464 (53%), Gaps = 43/464 (9%)
Query: 200 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAG-------- 247
+QS + +WT+ ++ +NG L EA F M + N I++ A+++G
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 248 ------------------------------YVQSNKMDMARELFEAMPSRNVSSWNTMIT 277
Y + + AR +F+ M +N +WNTMI
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 278 GYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 337
GY ++G + A K+FD MP+RD +SW A+I+G+ + G+ EEAL F E++ G +
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 338 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE 397
AL+ C ++ AL G +H V+ ++ V N+L+ +Y +CG + A VF +E
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 398 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
++ VVSWN++I G+A +G ++L+ F M+ G KPD +T G L+ACSH GL++ G
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 458 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIH 517
YF M DY ++P +HY C++DL RAGRLE+A L+++MP +P G+LL A H
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 518 GNT-ELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 576
GN L E+ + + + + YV+LSN+YAA G+W A MR +M+ +G++K G+S
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 577 WVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSST 620
+E+ + +H F GD H E I LE + +R +G V T
Sbjct: 449 SIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 163/340 (47%), Gaps = 48/340 (14%)
Query: 26 AMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVS 85
A+I Y + RF AR +FD M ++ V+WN M+ GY+R+ ++ +A ++FD MP++D++S
Sbjct: 114 AIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLIS 173
Query: 86 WNAMLSGYAQNGYADEAREVFYQM-------------------PHKNAISWNGLLAAYVH 126
W AM++G+ + GY +EA F +M + A+S+ + YV
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 127 NGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGY 186
+ + R+ +S LI C G + AR++F M R VVSWN++I G+
Sbjct: 234 SQDFKNNVRVSNS-----LIDLYCRCG------CVEFARQVFYNMEKRTVVSWNSVIVGF 282
Query: 187 AQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-- 240
A +G+ ++ F + + D T+T ++ G+++E +F M IS
Sbjct: 283 AANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPR 342
Query: 241 ---YNAMVAGYVQSNKMDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFD 293
Y +V Y ++ +++ A +L ++MP + + S + +G N I A +L
Sbjct: 343 IEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN--IVLAERLMK 400
Query: 294 MMPQRDCVS---WAAIISGYAQTGHYEEALNMFIEIKRDG 330
+ + S + + + YA G +E A M ++K G
Sbjct: 401 HLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLG 440
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 19/289 (6%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
+ G A VF+ M ++SV++N MI GY+R+ + A +FDKMP+RDL+SW M+ G
Sbjct: 121 KRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMING 180
Query: 62 YVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEA----REVFYQMPHKN 113
+V+ +A F M + D V+ A L+ G R V Q N
Sbjct: 181 FVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNN 240
Query: 114 AISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV----KRKMLGAARKLFD 169
N L+ Y G +E A ++F + ++SWN ++ GF + L RK+ +
Sbjct: 241 VRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE 300
Query: 170 KMHVRDVVSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLD 224
K D V++ ++ + G + + F D + + +V Y + G L+
Sbjct: 301 KGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLE 360
Query: 225 EARTFFDQMPQK-NEISYNAMVAGYV-QSNKMDMARELFEAMPSRNVSS 271
+A MP K NE+ +++A N + +A L + + NV S
Sbjct: 361 DALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKS 409
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 157/346 (45%), Gaps = 28/346 (8%)
Query: 5 HCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLT 60
H + ++ N ++VS+ + I+ RN R + A F M + + +++ +L+
Sbjct: 20 HANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLS 79
Query: 61 G----YVRNRRLGDARRLFD---SMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN 113
G + LGD + + + V+ A++ Y++ G +AR VF M KN
Sbjct: 80 GCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKN 139
Query: 114 AISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV 173
+++WN ++ Y+ +G+++ A ++FD + +LISW ++ GFVK+ A F +M +
Sbjct: 140 SVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQI 199
Query: 174 R----DVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 225
D V+ ++ G +S + + Q +V +++ Y + G ++
Sbjct: 200 SGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEF 259
Query: 226 ARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQ 281
AR F M ++ +S+N+++ G+ + + F M + + ++ +T
Sbjct: 260 ARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSH 319
Query: 282 NGDIAQARKLFDMMPQRDCVS-----WAAIISGYAQTGHYEEALNM 322
G + + + F +M +S + ++ Y++ G E+AL +
Sbjct: 320 VGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKL 365
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/533 (34%), Positives = 271/533 (50%), Gaps = 48/533 (9%)
Query: 68 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 127
L AR +F+S+ V WN+M+ GY+ + D+A +FYQ + S + YV
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKAL-IFYQEMLRKGYSPDYFTFPYVL- 114
Query: 128 GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYA 187
+AC S I + + GFV + M+V ++ Y
Sbjct: 115 ----KAC------SGLRDIQFGSCVHGFVVKTGFEV------NMYVS-----TCLLHMYM 153
Query: 188 QDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVA- 246
G+++ +F+ P +V W +++SG+V N +A F +M Q N + N +
Sbjct: 154 CCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREM-QSNGVKANETIMV 212
Query: 247 -------------------GYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQ 287
G++Q D F++ NV ++I Y + GD+
Sbjct: 213 DLLVACGRCKDIVTGKWFHGFLQGLGFD---PYFQSKVGFNVILATSLIDMYAKCGDLRT 269
Query: 288 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 347
AR LFD MP+R VSW +II+GY+Q G EEAL MF+++ G + ++ TF +
Sbjct: 270 ARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMI 329
Query: 348 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 407
+LG+ IH V KTG+ + AL+ MY K G A FE +E+KD ++W +
Sbjct: 330 QGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVV 389
Query: 408 IAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 466
I G A HG G +AL +F+ M+ G PD IT +GVL ACSH GL++ G YF M +
Sbjct: 390 IIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH 449
Query: 467 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 526
+ P+ +HY CM+D+L RAGR EEA+ L++ MP +P WGALL IH N EL ++
Sbjct: 450 GLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRI 509
Query: 527 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 579
MV + E SG+YVLLSN+YA +GRWAD +R M+ V KV G+S VE
Sbjct: 510 RSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 176/381 (46%), Gaps = 43/381 (11%)
Query: 173 VRDVVSWNTMI---SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF 229
+R+V+ + +I + + ++S A+++F+ V+ W +M+ GY + D+A F
Sbjct: 35 IRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIF 94
Query: 230 FDQMPQKN-------------------EISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 270
+ +M +K +I + + V G+V ++ N+
Sbjct: 95 YQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV-----------NMY 143
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
++ Y G++ ++F+ +PQ + V+W ++ISG+ + +A+ F E++ +G
Sbjct: 144 VSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNG 203
Query: 331 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET--------GCFVGNALLGMYFK 382
N + L C + GK HG + G++ + +L+ MY K
Sbjct: 204 VKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAK 263
Query: 383 CGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 442
CG + A +F+G+ E+ +VSWN++I GY+++G ++AL +F M +G+ PD++T + V
Sbjct: 264 CGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSV 323
Query: 443 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 502
+ A G G ++K V ++ ++++ + G E A+ ++ +
Sbjct: 324 IRASMIQGCSQLGQSIHAYVSKTGFVKDAAI-VCALVNMYAKTGDAESAKKAFEDLEKKD 382
Query: 503 PAASWGALLG-ASRIHGNTEL 522
A ++G AS HGN L
Sbjct: 383 TIAWTVVIIGLASHGHGNEAL 403
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 161/348 (46%), Gaps = 74/348 (21%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ----------- 49
M G + LRVF +P+ + V++ ++ISG++ N RFS A + F +M
Sbjct: 153 MCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMV 212
Query: 50 ---------RDLVS----------------------WNVMLTG-----YVRNRRLGDARR 73
+D+V+ +NV+L Y + L AR
Sbjct: 213 DLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARY 272
Query: 74 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLAAYVHN 127
LFD MP++ +VSWN++++GY+QNG A+EA +F M P K +++ ++ A +
Sbjct: 273 LFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDK--VTFLSVIRASMIQ 330
Query: 128 G--RIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 181
G ++ ++ + SK+ D ++ L+ + K +A+K F+ + +D ++W
Sbjct: 331 GCSQLGQSIHAYVSKTGFVKDAAIVC--ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTV 388
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 236
+I G A G ++A ++F + + D T+ ++ G+++E + +F +M
Sbjct: 389 VIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDL 448
Query: 237 NEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITG 278
+ + Y MV ++ + + A L + MP + NV+ W ++ G
Sbjct: 449 HGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 179/599 (29%), Positives = 305/599 (50%), Gaps = 49/599 (8%)
Query: 49 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 108
Q + N +++ Y+R R+ +A LF M KD+VSWN +++GYA N +A ++F+
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 109 MPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW--------------NCLMGG 154
+ HK +S + + + + +L D S E+ S+ N L+
Sbjct: 320 LVHKGDVSPDSVTIISI----LPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISF 375
Query: 155 FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQ----AKNLFDQSPHQDVFTW 210
+ + AA F M +D++SWN ++ +A Q +L +++ D T
Sbjct: 376 YARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTI 435
Query: 211 TAM---------------VSGY-VQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKM 254
++ V GY V+ G+L + ++ P+ NA++ Y + +
Sbjct: 436 LSLLKFCINVQGIGKVKEVHGYSVKAGLLHD-----EEEPKLG----NALLDAYAKCGNV 486
Query: 255 DMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 313
+ A ++F + R + S+N++++GY +G A+ LF M D +W+ ++ YA++
Sbjct: 487 EYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAES 546
Query: 314 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 373
EA+ +F EI+ G N T L CA +A+L L +Q HG +++ G G
Sbjct: 547 CCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKG 606
Query: 374 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVK 433
LL +Y KCGS+ A VF+ +D+V + M+AGYA HG GK+ALM++ M +K
Sbjct: 607 T-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIK 665
Query: 434 PDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQD 493
PD + + +L+AC HAGLI G + + S+ + + P+ + Y C +DL+ R GRL++A
Sbjct: 666 PDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYS 725
Query: 494 LMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGR 553
+ MP EP A WG LL A + +LG A + + E ++G +VL+SN+YAA +
Sbjct: 726 FVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAK 785
Query: 554 WADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR 612
W +R+ M+ ++K G SW+EV + + F GDC HP +D I+ + L L+M+
Sbjct: 786 WEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 212/474 (44%), Gaps = 74/474 (15%)
Query: 26 AMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGY-VRNRRLGDARRLFDSM-----P 79
++++ Y + R + +F +M D V WN++LTG V R + R F +M P
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEP 118
Query: 80 QKDVVSWNAMLS-----GYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI-EEA 133
+ V++ +L G + NG + + + + K+ + N L++ Y G I +A
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGL-EKDTLVGNALVSMYAKFGFIFPDA 177
Query: 134 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 193
FD +D +++SWN ++ GF + M+ A + F M +++ N S
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM-LKEPTEPNYATIANVLPVCAS 236
Query: 194 QAKNLFDQSPHQ-------------DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS 240
KN+ +S Q VF ++VS Y++ G ++EA + F +M K+ +S
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
Query: 241 YNAMVAGYVQSNKMDMARELFEAMPSR--------------------------------- 267
+N ++AGY + + A +LF + +
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 268 --------NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
+ S N +I+ Y + GD + A F +M +D +SW AI+ +A + +
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQF 416
Query: 320 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY---ETGCFVGNAL 376
LN+ + + +L+ T L C ++ + K++HG VK G E +GNAL
Sbjct: 417 LNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNAL 476
Query: 377 LGMYFKCGSIGEANDVFEGIEE-KDVVSWNTMIAGYARHGFGKQALMVFESMKT 429
L Y KCG++ A+ +F G+ E + +VS+N++++GY G A M+F M T
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMST 530
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 161/348 (46%), Gaps = 17/348 (4%)
Query: 181 TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF----FDQMPQK 236
++++ YA+ M + +F Q D W +++G + + R F F P+
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKP 120
Query: 237 NEISYNAMVAGYVQ----SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDI-AQARKL 291
+ +++ ++ V+ N M + +A ++ N +++ Y + G I A
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 292 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI--- 348
FD + +D VSW AII+G+++ +A F + ++ N +T + L CA +
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 349 AALELGKQIHGQVVKTGY-ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 407
A G+QIH VV+ + +T FV N+L+ Y + G I EA +F + KD+VSWN +
Sbjct: 241 IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVV 300
Query: 408 IAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNKD 465
IAGYA + +A +F ++ G V PD +T++ +L C+ + G E + Y +
Sbjct: 301 IAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS 360
Query: 466 YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 513
Y + +S +I R G A M + SW A+L A
Sbjct: 361 YLLEDTSVG-NALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 183/457 (40%), Gaps = 98/457 (21%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSY-----NAMISGYLRNARFSLARDLFDKMPQRDLVSWN 56
+N C S ++ + + +RS + N+++S YLR R A LF +M +DLVSWN
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298
Query: 57 VMLTGYVRNRRLGDARRLFDSMPQKDVVS------------------------------- 85
V++ GY N A +LF ++ K VS
Sbjct: 299 VVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILR 358
Query: 86 ----------WNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGR------ 129
NA++S YA+ G A F M K+ ISWN +L A+ + +
Sbjct: 359 HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLN 418
Query: 130 -----IEEACRLFDSKSDWELISW--------------------------------NCLM 152
+ EA L DS + L+ + N L+
Sbjct: 419 LLHHLLNEAITL-DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALL 477
Query: 153 GGFVKRKMLGAARKLFDKM-HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT 211
+ K + A K+F + R +VS+N+++SGY G A+ LF + D+ TW+
Sbjct: 478 DAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWS 537
Query: 212 AMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPS- 266
MV Y ++ +EA F ++ + N ++ ++ Q + + R+ +
Sbjct: 538 LMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRG 597
Query: 267 --RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 324
++ T++ Y + G + A +F +RD V + A+++GYA G +EAL ++
Sbjct: 598 GLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYS 657
Query: 325 EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 361
+ + + L+ C ++ G QI+ +
Sbjct: 658 HMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSI 694
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 320 LNMFIEIKR--DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 377
L F++ R G + F + CA ++ L G+ +HG V K G+ V ++L
Sbjct: 4 LRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVL 63
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDE 436
MY KC + + +F ++ D V WN ++ G + G++ + F++M KP
Sbjct: 64 NMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSS 122
Query: 437 ITMVGVLSACSHAG 450
+T VL C G
Sbjct: 123 VTFAIVLPLCVRLG 136
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 219/371 (59%), Gaps = 5/371 (1%)
Query: 242 NAMVAGYVQS-NKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 300
A++ Y S + + +AR+LF+ M RNV SW M++GY ++GDI+ A LF+ MP+RD
Sbjct: 165 TALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDV 224
Query: 301 VSWAAIISGYAQTGHYEEALNMFIE-IKRDGESLNRSTFSCALSTCADIAALELGKQIHG 359
SW AI++ Q G + EA+++F I N T C LS CA L+L K IH
Sbjct: 225 PSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHA 284
Query: 360 QVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQ 419
+ + FV N+L+ +Y KCG++ EA+ VF+ +K + +WN+MI +A HG ++
Sbjct: 285 FAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEE 344
Query: 420 ALMVFESMKTIGV---KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYT 476
A+ VFE M + + KPD IT +G+L+AC+H GL+ +G YF M + + P +HY
Sbjct: 345 AIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYG 404
Query: 477 CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 536
C+IDLLGRAGR +EA ++M M + A WG+LL A +IHG+ +L E A + + + P+
Sbjct: 405 CLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPN 464
Query: 537 NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPE 596
N G +++NLY G W +A R ++ K G+S +E+ N++H+F D HPE
Sbjct: 465 NGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPE 524
Query: 597 KDRIYAFLEEL 607
+ IY L+ L
Sbjct: 525 TEEIYMILDSL 535
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 161/326 (49%), Gaps = 30/326 (9%)
Query: 22 VSYNAMISGYLRN-ARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ 80
V A++ Y + + +LAR LFD+M +R++VSW ML+GY R+ + +A LF+ MP+
Sbjct: 162 VVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPE 221
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN-----GLLAAYVHNGRIEEA-- 133
+DV SWNA+L+ QNG EA +F +M ++ +I N +L+A G ++ A
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281
Query: 134 CRLFDSKSDW--ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 191
F + D ++ N L+ + K L A +F + + +WN+MI+ +A G
Sbjct: 282 IHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGR 341
Query: 192 MSQAKNLFDQ-------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS---- 240
+A +F++ D T+ +++ G++ + R +FD M + I
Sbjct: 342 SEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIE 401
Query: 241 -YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNG--DIAQ--ARKLFDM 294
Y ++ ++ + D A E+ M + + + W +++ +G D+A+ + L +
Sbjct: 402 HYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVAL 461
Query: 295 MPQRDCVSWAAIISG-YAQTGHYEEA 319
P + A+++ Y + G++EEA
Sbjct: 462 NPNNG--GYVAMMANLYGEMGNWEEA 485
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 179/421 (42%), Gaps = 95/421 (22%)
Query: 176 VVSWNTMISGYAQD-GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
VV ++ YA ++ A+ LFD+ ++V +WTAM+SGY ++G + A F+ MP
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP 220
Query: 235 QKNEISYNAMVAGYVQSNKMDMARELFEAM---PS------------------------- 266
+++ S+NA++A Q+ A LF M PS
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Query: 267 --------RNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG 314
R++SS N+++ YG+ G++ +A +F M ++ +W ++I+ +A G
Sbjct: 281 GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHG 340
Query: 315 HYEEALNMFIEIKR---DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 371
EEA+ +F E+ + + + TF L+ C HG +V G
Sbjct: 341 RSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT-----------HGGLVSKGRGYFDL 389
Query: 372 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 431
+ N GIE + + + +I R G +AL E M T+
Sbjct: 390 MTNRF------------------GIEPR-IEHYGCLIDLLGRAGRFDEAL---EVMSTMK 427
Query: 432 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI-DLLGRAGRLEE 490
+K DE +L+AC G +D ++ ++ P++ Y M+ +L G G EE
Sbjct: 428 MKADEAIWGSLLNACKIHGHLDLAE---VAVKNLVALNPNNGGYVAMMANLYGEMGNWEE 484
Query: 491 AQDLMRNM----PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN 546
A+ + + ++PP G SRI + E+ + + + K P +Y++L +
Sbjct: 485 ARRARKMIKHQNAYKPP--------GWSRIEIDNEVHQFYS--LDKSHPETEEIYMILDS 534
Query: 547 L 547
L
Sbjct: 535 L 535
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 114/270 (42%), Gaps = 27/270 (10%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWN----- 56
R+G +A+ +F MP R S+NA+++ +N F A LF +M + N
Sbjct: 205 RSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVV 264
Query: 57 VMLTGYVRNRRLGDARRLFDSMPQKDVVS----WNAMLSGYAQNGYADEAREVFYQMPHK 112
+L+ + L A+ + ++D+ S N+++ Y + G +EA VF K
Sbjct: 265 CVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKK 324
Query: 113 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL-------ISWNCLMGGFVKRKMLGAAR 165
+ +WN ++ + +GR EEA +F+ + I++ L+ ++ R
Sbjct: 325 SLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGR 384
Query: 166 KLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-DVFTWTAMVSGYVQ 219
FD M R + + +I + G +A + + D W ++++
Sbjct: 385 GYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKI 444
Query: 220 NGMLDEARTFFDQMPQKNEISYNAMVAGYV 249
+G LD A ++ KN ++ N GYV
Sbjct: 445 HGHLDLA-----EVAVKNLVALNPNNGGYV 469
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 266/488 (54%), Gaps = 23/488 (4%)
Query: 146 ISWNCLMGGFVKRKMLGAARK----LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 201
++N + K + +G R LF RDV +++I YA+ G + A+ LFD+
Sbjct: 133 FTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDE 192
Query: 202 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMA 257
+D +W +M+SGY + G +A F +M ++ +E + +M+ +
Sbjct: 193 ITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG 252
Query: 258 RELFEAMPSRNV--SSW--NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 313
R L E ++ + S++ + +I+ YG+ GD+ AR++F+ M ++D V+W A+I+ Y+Q
Sbjct: 253 RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQN 312
Query: 314 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 373
G EA +F E+++ G S + T S LS C + ALELGKQI + + +V
Sbjct: 313 GKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVA 372
Query: 374 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVK 433
L+ MY KCG + EA VFE + K+ +WN MI YA G K+AL++F+ M V
Sbjct: 373 TGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVP 429
Query: 434 PDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQD 493
P +IT +GVLSAC HAGL+ +G YF+ M+ + + P +HYT +IDLL RAG L+EA +
Sbjct: 430 PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWE 489
Query: 494 LMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM-EPHNSGMYVLLSNLYAASG 552
M P +P A+LGA + + EKA M+ +M E N+G YV+ SN+ A
Sbjct: 490 FMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMK 549
Query: 553 RWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG----DCFHPEKDRIYAFLEELD 608
W ++ MR+ MRD GV K G SW+E++ ++ +F G C + ++ L E
Sbjct: 550 MWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVE-- 607
Query: 609 LKMRREGY 616
+M+RE Y
Sbjct: 608 -EMKRERY 614
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 186/366 (50%), Gaps = 11/366 (3%)
Query: 165 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLD 224
R++ +M + V N +I + GD + + LF + + +++ M+ G
Sbjct: 54 RQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDH 113
Query: 225 EAR-TFFDQMP----QKNEISYNAMVAGYVQSNKMDMARE----LFEAMPSRNVSSWNTM 275
EA + + +M + ++ +YN + + ++ + R LF+ R+V +++
Sbjct: 114 EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSL 173
Query: 276 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 335
I Y + G + ARKLFD + +RD VSW ++ISGY++ G+ ++A+++F +++ +G +
Sbjct: 174 IMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDE 233
Query: 336 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 395
T L C+ + L G+ + + F+G+ L+ MY KCG + A VF
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 396 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
+ +KD V+W MI Y+++G +A +F M+ GV PD T+ VLSAC G ++ G
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 456 TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASR 515
+ + + S+ + T ++D+ G+ GR+EEA + MP + A+W A++ A
Sbjct: 354 KQ-IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNE-ATWNAMITAYA 411
Query: 516 IHGNTE 521
G+ +
Sbjct: 412 HQGHAK 417
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 25/310 (8%)
Query: 38 SLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNG 97
S+ LF +RD+ + ++ Y + ++G AR+LFD + ++D VSWN+M+SGY++ G
Sbjct: 153 SVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAG 212
Query: 98 YADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMG 153
YA +A ++F +M + + + +L A H G + RL + + + I + +G
Sbjct: 213 YAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLG 271
Query: 154 G-----FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------S 202
+ K L +AR++F++M +D V+W MI+ Y+Q+G S+A LF + S
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 203 PHQDVFTWTAMVSGYVQNGMLD---EARTFFDQMP-QKNEISYNAMVAGYVQSNKMDMAR 258
P D T + ++S G L+ + T ++ Q N +V Y + +++ A
Sbjct: 332 P--DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 389
Query: 259 ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM--PQRDCVSWAAIISGYAQTGHY 316
+FEAMP +N ++WN MIT Y G +A LFD M P D +++ ++S G
Sbjct: 390 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSD-ITFIGVLSACVHAGLV 448
Query: 317 EEALNMFIEI 326
+ F E+
Sbjct: 449 HQGCRYFHEM 458
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 164/379 (43%), Gaps = 45/379 (11%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP-------QRDLVSWN 56
G A ++F+ + R +VS+N+MISGY A DLF KM +R LVS
Sbjct: 181 GQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVS-- 238
Query: 57 VMLTGYVRNRRLGDAR--RLFDSMPQKDVVSWNAML-----SGYAQNGYADEAREVFYQM 109
+ G + LGD R RL + M + + L S Y + G D AR VF QM
Sbjct: 239 --MLGACSH--LGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM 294
Query: 110 PHKNAISWNGLLAAYVHNGRIEEACRLF----------DSKSDWELISWNCLMGGFVKRK 159
K+ ++W ++ Y NG+ EA +LF D+ + ++S +G K
Sbjct: 295 IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 354
Query: 160 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 219
+ H ++ ++ Y + G + +A +F+ P ++ TW AM++ Y
Sbjct: 355 QIETHASELSLQH--NIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAH 412
Query: 220 NGMLDEARTFFDQMP-QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWN 273
G EA FD+M ++I++ +++ V + + F M S + +
Sbjct: 413 QGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYT 472
Query: 274 TMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISGYAQ---TGHYEEALNMFIEIKRD 329
+I + G + +A + + P + D + AAI+ + E+A+ M +E+K
Sbjct: 473 NIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMK-- 530
Query: 330 GESLNRSTFSCALSTCADI 348
E+ N + + + AD+
Sbjct: 531 -EAKNAGNYVISSNVLADM 548
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 199/663 (30%), Positives = 322/663 (48%), Gaps = 94/663 (14%)
Query: 5 HCDSALRVFNTMPRRSSVS-YNAMISGYLRNARF-------------------------- 37
HC SA VF RS V +N+++SGY +N+ F
Sbjct: 55 HC-SARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNV 113
Query: 38 -----SLARDLFDKMPQR---------DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV 83
+L R+ +M D+V + ++ Y + ++ ++FD MP++DV
Sbjct: 114 IKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDV 173
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAA-----YVHNGR-IEEA 133
SWN ++S + Q+G A++A E+F +M N++S ++A ++ G+ I
Sbjct: 174 ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRK 233
Query: 134 CRLFDSKSDWELISW--NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 191
C K +EL + + L+ + K L AR++F KM + +V+WN+MI GY GD
Sbjct: 234 C----VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD 289
Query: 192 MSQAKNLFDQ------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMV 245
+ ++ P Q T M +N + + +
Sbjct: 290 SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRN------------------LLHGKFI 331
Query: 246 AGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAA 305
GYV R + A N S +I Y + G+ A +F + SW
Sbjct: 332 HGYV-------IRSVVNADIYVNCS----LIDLYFKCGEANLAETVFSKTQKDVAESWNV 380
Query: 306 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 365
+IS Y G++ +A+ ++ ++ G + TF+ L C+ +AALE GKQIH + ++
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440
Query: 366 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 425
ET + +ALL MY KCG+ EA +F I +KDVVSW MI+ Y HG ++AL F+
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFD 500
Query: 426 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 485
M+ G+KPD +T++ VLSAC HAGLID G ++F M Y + P +HY+CMID+LGRA
Sbjct: 501 EMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRA 560
Query: 486 GRLEEAQDLMRNMPFEPPAAS-WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLL 544
GRL EA ++++ P A L A +H LG++ A ++ + P ++ Y++L
Sbjct: 561 GRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVL 620
Query: 545 SNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFL 604
NLYA+ W A +R +M+++G++K G SW+E+ +K+ F D H + +Y L
Sbjct: 621 FNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Query: 605 EEL 607
L
Sbjct: 681 ALL 683
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 227/485 (46%), Gaps = 43/485 (8%)
Query: 49 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMP-QKDVVSWNAMLSGYAQNGYADEAREVFY 107
+RD+V ++ Y + AR +F++ + DV WN+++SGY++N + EVF
Sbjct: 36 RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFK 95
Query: 108 QMPH-----KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLG 162
++ + ++ ++ ++ AY GR +G + ++
Sbjct: 96 RLLNCSICVPDSFTFPNVIKAYGALGRE--------------------FLGRMIHTLVVK 135
Query: 163 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGM 222
+ +V DVV ++++ YA+ + +FD+ P +DV +W ++S + Q+G
Sbjct: 136 SG-------YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 223 LDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNT 274
++A F +M + N +S ++ + ++ +E+ + +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
++ YG+ + AR++F MP++ V+W ++I GY G + + + + +G +
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
++T + L C+ L GK IHG V+++ +V +L+ +YFKCG A VF
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 395 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR 454
++ SWN MI+ Y G +A+ V++ M ++GVKPD +T VL ACS +++
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 455 GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGAS 514
G + S+++ + + ++D+ + G +EA + ++P + SW ++ A
Sbjct: 429 GKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAY 486
Query: 515 RIHGN 519
HG
Sbjct: 487 GSHGQ 491
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 102/219 (46%), Gaps = 17/219 (7%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM----PQRDLVSWNV 57
+ G + A VF+ + + S+N MIS Y+ + A +++D+M + D+V++
Sbjct: 356 KCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTS 415
Query: 58 MLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKN 113
+L + L +++ S+ + D + +A+L Y++ G EA +F +P K+
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKD 475
Query: 114 AISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKLFD 169
+SW +++AY +G+ EA FD + L ++ ++ ++ K F
Sbjct: 476 VVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS 535
Query: 170 KMH----VRDVVS-WNTMISGYAQDGDMSQAKNLFDQSP 203
+M + ++ ++ MI + G + +A + Q+P
Sbjct: 536 QMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTP 574
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 26/205 (12%)
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYAR 413
K +H +++ G + +L+ +YF C A VFE + DV WN++++GY++
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 414 HGFGKQALMVFESMKTIGV-KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSS 472
+ L VF+ + + PD T V+ A + L G E+ M V
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA--YGAL---GREFLGRMIHTLVVKSG- 137
Query: 473 KHYTC-------MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEK 525
Y C ++ + + E + + MP E ASW ++ G EK
Sbjct: 138 --YVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVISCFYQSGE---AEK 191
Query: 526 AAEMVFKM-----EPHNSGMYVLLS 545
A E+ +M EP++ + V +S
Sbjct: 192 ALELFGRMESSGFEPNSVSLTVAIS 216
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 263/465 (56%), Gaps = 12/465 (2%)
Query: 164 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF------DQSPHQDVFTWTAMVSGY 217
A +F +++ ++ WNT+I G+++ A ++F S T+ ++ Y
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY 136
Query: 218 VQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN 273
+ G + R + ++ + N M+ YV + A +F M +V +WN
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWN 196
Query: 274 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 333
+MI G+ + G I QA+ LFD MPQR+ VSW ++ISG+ + G +++AL+MF E++
Sbjct: 197 SMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKP 256
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
+ T L+ CA + A E G+ IH +V+ +E V AL+ MY KCG I E +VF
Sbjct: 257 DGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF 316
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 453
E +K + WN+MI G A +GF ++A+ +F ++ G++PD ++ +GVL+AC+H+G +
Sbjct: 317 ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 454 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 513
R E+F M + Y + PS KHYT M+++LG AG LEEA+ L++NMP E W +LL A
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Query: 514 SRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVT 573
R GN E+ ++AA+ + K++P + YVLLSN YA+ G + +A R M++ ++K
Sbjct: 437 CRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEV 496
Query: 574 GYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEEL--DLKMRREGY 616
G S +EV ++H+F HP+ IY+ L+ L D+ + G+
Sbjct: 497 GCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDVSTIKSGF 541
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 138/287 (48%), Gaps = 28/287 (9%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
N ML YV L +A R+F M DVV+WN+M+ G+A+ G D+A+ +F +MP +N +
Sbjct: 165 NTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGV 224
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKL-------- 167
SWN +++ +V NGR ++A +F + ++ GF +L A L
Sbjct: 225 SWNSMISGFVRNGRFKDALDMFREMQEKDVKP-----DGFTMVSLLNACAYLGASEQGRW 279
Query: 168 FDKMHVRDVVSWNT-----MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGM 222
+ VR+ N+ +I Y + G + + N+F+ +P + + W +M+ G NG
Sbjct: 280 IHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGF 339
Query: 223 LDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWN 273
+ A F ++ + + +S+ ++ S ++ A E F M + ++ +
Sbjct: 340 EERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYT 399
Query: 274 TMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIISGYAQTGHYEEA 319
M+ G G + +A L MP + D V W++++S + G+ E A
Sbjct: 400 LMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 132/268 (49%), Gaps = 18/268 (6%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRL 68
A R+F M V++N+MI G+ + A++LFD+MPQR+ VSWN M++G+VRN R
Sbjct: 180 AWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRF 239
Query: 69 GDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGL 120
DA +F M +KDV + ++L+ A G +++ R + + N+I L
Sbjct: 240 KDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTAL 299
Query: 121 LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DV 176
+ Y G IEE +F+ +L WN ++ G A LF ++ D
Sbjct: 300 IDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDS 359
Query: 177 VSWNTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEARTFFD 231
VS+ +++ A G++ +A F + + +T MV+ G+L+EA
Sbjct: 360 VSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIK 419
Query: 232 QMP-QKNEISYNAMVAGYVQSNKMDMAR 258
MP +++ + ++++++ + ++MA+
Sbjct: 420 NMPVEEDTVIWSSLLSACRKIGNVEMAK 447
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 120/277 (43%), Gaps = 52/277 (18%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL--------- 52
+ G D A +F+ MP+R+ VS+N+MISG++RN RF A D+F +M ++D+
Sbjct: 204 KCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 53 ------------------------------VSWNVMLTGYVRNRRLGDARRLFDSMPQKD 82
+ ++ Y + + + +F+ P+K
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ 323
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFD 138
+ WN+M+ G A NG+ + A ++F ++ +++S+ G+L A H+G + A F
Sbjct: 324 LSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR 383
Query: 139 SKSDWELIS-----WNCLMGGFVKRKMLGAARKLFDKMHV-RDVVSWNTMISGYAQDGDM 192
+ +I + ++ +L A L M V D V W++++S + G++
Sbjct: 384 LMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNV 443
Query: 193 SQAK---NLFDQSPHQDVFTWTAMVSGYVQNGMLDEA 226
AK + + + + + Y G+ +EA
Sbjct: 444 EMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEA 480
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 13/233 (5%)
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN---DVFEGIEEKDVVSWNTMIAGY 411
KQIH ++KTG + + +L F C S + N VF I K+ WNT+I G+
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLA--FCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGF 99
Query: 412 ARHGFGKQALMVFESM--KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 469
+R F + A+ +F M + VKP +T V A G G + + M +
Sbjct: 100 SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ-LHGMVIKEGLE 158
Query: 470 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 529
S M+ + G L EA + M +W +++ G L ++A +
Sbjct: 159 DDSFIRNTMLHMYVTCGCLIEAWRIFLGM-IGFDVVAWNSMIMGFAKCG---LIDQAQNL 214
Query: 530 VFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQN 582
+M N + + + + +GR+ DA +M M++ V K G++ V + N
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDV-KPDGFTMVSLLN 266
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/361 (39%), Positives = 219/361 (60%), Gaps = 1/361 (0%)
Query: 206 DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 265
DVF +V+ Y ++G + AR D+MP ++ +S+N++++ Y++ +D AR LF+ M
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 266 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 325
RNV SWN MI+GY G + +A+++FD MP RD VSW A+++ YA G Y E L +F +
Sbjct: 234 ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNK 293
Query: 326 IKRDG-ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 384
+ D E + T LS CA + +L G+ +H + K G E F+ AL+ MY KCG
Sbjct: 294 MLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCG 353
Query: 385 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 444
I +A +VF ++DV +WN++I+ + HG GK AL +F M G KP+ IT +GVLS
Sbjct: 354 KIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLS 413
Query: 445 ACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPA 504
AC+H G++D+ + F M+ Y V P+ +HY CM+DLLGR G++EEA++L+ +P + +
Sbjct: 414 ACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEAS 473
Query: 505 ASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 564
+LLGA + G E E+ A + ++ +S Y +SNLYA+ GRW + R M
Sbjct: 474 ILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
Query: 565 R 565
R
Sbjct: 534 R 534
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 159/319 (49%), Gaps = 29/319 (9%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
N +++ Y R+ F +AR + D+MP RD VSWN +L+ Y+ + +AR LFD M +++V
Sbjct: 179 NTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE 238
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 144
SWN M+SGYA G EA+EVF MP ++ +SWN ++ AY H G E +F+ D
Sbjct: 239 SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDS 298
Query: 145 LISWNCLMGGFVKRKMLGAARKL------------FDKMHVRDVVSW--NTMISGYAQDG 190
+ GF +L A L DK H ++ + ++ Y++ G
Sbjct: 299 TEKPD----GFTLVSVLSACASLGSLSQGEWVHVYIDK-HGIEIEGFLATALVDMYSKCG 353
Query: 191 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVA 246
+ +A +F + +DV TW +++S +G+ +A F +M + N I++ +++
Sbjct: 354 KIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLS 413
Query: 247 GYVQSNKMDMARELFEAMPS-----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC- 300
+D AR+LFE M S + + M+ G+ G I +A +L + +P +
Sbjct: 414 ACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEAS 473
Query: 301 VSWAAIISGYAQTGHYEEA 319
+ +++ + G E+A
Sbjct: 474 ILLESLLGACKRFGQLEQA 492
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 181/359 (50%), Gaps = 28/359 (7%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
R+G+ + A +V + MP R +VS+N+++S YL AR LFD+M +R++ SWN M++G
Sbjct: 187 RSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISG 246
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG-- 119
Y + +A+ +FDSMP +DVVSWNAM++ YA G +E EVF +M + +G
Sbjct: 247 YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFT 306
Query: 120 ---LLAAYVHNGRIEEA--CRLFDSKSDWELISW--NCLMGGFVKRKMLGAARKLFDKMH 172
+L+A G + + ++ K E+ + L+ + K + A ++F
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS 366
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEART 228
RDV +WN++IS + G A +F + ++ T+ ++S GMLD+AR
Sbjct: 367 KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARK 426
Query: 229 FFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITGYGQN 282
F+ M + Y MV + K++ A EL +P+ S +++ +
Sbjct: 427 LFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRF 486
Query: 283 GDIAQARKLFDMMPQ---RDCVSWAAIISGYAQTGHYEEALNMFIEIKRD--GESLNRS 336
G + QA ++ + + + RD +A + + YA G +E+ I+ +R+ E +NRS
Sbjct: 487 GQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKV----IDGRRNMRAERVNRS 541
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 158/331 (47%), Gaps = 52/331 (15%)
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
DV N +++ Y ++GY + AR+V +MP ++A+SWN LL+AY+ G ++EA LFD
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF-- 199
+ + SWN ++ G+ ++ A+++FD M VRDVVSWN M++ YA G ++ +F
Sbjct: 234 ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNK 293
Query: 200 ---DQSPHQDVFTWTAMVSGYVQNGMLDEAR---TFFDQMPQKNE-ISYNAMVAGYVQSN 252
D + D FT +++S G L + + D+ + E A+V Y +
Sbjct: 294 MLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCG 353
Query: 253 KMDMARELFEAMPSRNVSSWNTMIT-----GYGQN------------------------- 282
K+D A E+F A R+VS+WN++I+ G G++
Sbjct: 354 KIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLS 413
Query: 283 -----GDIAQARKLFDMMP-----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
G + QARKLF+MM + + ++ + G EEA + EI D S
Sbjct: 414 ACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEAS 473
Query: 333 LNRSTFSCALSTCADIAALELGKQIHGQVVK 363
+ L C LE ++I ++++
Sbjct: 474 I---LLESLLGACKRFGQLEQAERIANRLLE 501
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 12/237 (5%)
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYF---KCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
+Q H ++KTG F + L+ + ++ A+ + I + + N++I Y
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
A + AL VF M V PD+ + VL AC+ + G + K VT
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 531
T ++++ GR+G E A+ ++ MP A SW +LL A G L ++A +
Sbjct: 176 FVENT-LVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSAYLEKG---LVDEARALFD 230
Query: 532 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM--RDVGV--QKVTGYSWVEVQNKI 584
+ME N + + + YAA+G +A + M RDV VT Y+ V N++
Sbjct: 231 EMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEV 287
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 272/500 (54%), Gaps = 48/500 (9%)
Query: 121 LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV---- 176
L ++ + I A ++FD + ++IS ++G FVK A + F ++ +
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 177 VSWNTMISGYAQDGDMSQAKNL----FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
++ T+I D+ K L +VF +A+++ YV+ L +AR F
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCF-- 151
Query: 233 MPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF 292
D R+ NV S +I+GY + + +A LF
Sbjct: 152 ----------------------DDTRD-------PNVVSITNLISGYLKKHEFEEALSLF 182
Query: 293 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL-NRSTFSCALSTCADIAAL 351
MP+R V+W A+I G++QTG EEA+N F+++ R+G + N STF CA++ ++IA+
Sbjct: 183 RAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASH 242
Query: 352 ELGKQIHGQVVK-TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE--KDVVSWNTMI 408
GK IH +K G FV N+L+ Y KCG++ ++ F +EE +++VSWN+MI
Sbjct: 243 GAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMI 302
Query: 409 AGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 467
GYA +G G++A+ +FE M K ++P+ +T++GVL AC+HAGLI G YF DY
Sbjct: 303 WGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD 362
Query: 468 VTPSS---KHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 524
P+ +HY CM+D+L R+GR +EA++L+++MP +P W ALLG +IH N L +
Sbjct: 363 -DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAK 421
Query: 525 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKI 584
AA + +++P + YV+LSN Y+A W + +R +M++ G+++ TG SW+EV+++I
Sbjct: 422 LAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQI 481
Query: 585 HKFTVGDCFHPEKDRIYAFL 604
F D + KD +Y L
Sbjct: 482 RVFVNADKNNELKDEVYRML 501
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 183/413 (44%), Gaps = 31/413 (7%)
Query: 59 LTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNA 114
L ++ + + +A ++FD +P+ DV+S A++ + + EA + F ++ N
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 115 ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG-----FVKRKMLGAARKLFD 169
++ ++ + + ++ +L L S N +G +VK L AR+ FD
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLAS-NVFVGSAVLNCYVKLSTLTDARRCFD 152
Query: 170 KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA-RT 228
+VVS +ISGY + + +A +LF P + V TW A++ G+ Q G +EA T
Sbjct: 153 DTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNT 212
Query: 229 FFDQMPQ----KNEISYNAMVAGYVQSNKMDMAREL----FEAMPSR-NVSSWNTMITGY 279
F D + + NE ++ + + + + + R NV WN++I+ Y
Sbjct: 213 FVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFY 272
Query: 280 GQNGDIAQARKLFDMM--PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLNRS 336
+ G++ + F+ + QR+ VSW ++I GYA G EEA+ MF ++ +D N
Sbjct: 273 SKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNV 332
Query: 337 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG----NALLGMYFKCGSIGEANDV 392
T L C ++ G + V Y+ + ++ M + G EA ++
Sbjct: 333 TILGVLFACNHAGLIQEGYMYFNKAV-NDYDDPNLLELEHYACMVDMLSRSGRFKEAEEL 391
Query: 393 FEGIE-EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 444
+ + + + W ++ G H + L + K + + P +++ +LS
Sbjct: 392 IKSMPLDPGIGFWKALLGGCQIH--SNKRLAKLAASKILELDPRDVSSYVMLS 442
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 157/323 (48%), Gaps = 32/323 (9%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
+A+++ Y++ + + AR FD ++VS +++GY++ +A LF +MP++ VV
Sbjct: 132 SAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVV 191
Query: 85 SWNAMLSGYAQNGYADEAREVFYQM-------PHKN----AISWNGLLAAYVHNGRIEEA 133
+WNA++ G++Q G +EA F M P+++ AI+ +A++ G+ A
Sbjct: 192 TWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASH-GAGKSIHA 250
Query: 134 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM--HVRDVVSWNTMISGYAQDGD 191
C + + + WN L+ + K + + F+K+ R++VSWN+MI GYA +G
Sbjct: 251 CAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGR 310
Query: 192 MSQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM------PQKNEIS 240
+A +F D + + T ++ G++ E +F++ P E+
Sbjct: 311 GEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELE 370
Query: 241 -YNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITG--YGQNGDIAQ--ARKLFDM 294
Y MV +S + A EL ++MP + W ++ G N +A+ A K+ ++
Sbjct: 371 HYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILEL 430
Query: 295 MPQRDCVSWAAIISGYAQTGHYE 317
P RD S+ + + Y+ +++
Sbjct: 431 DP-RDVSSYVMLSNAYSAMENWQ 452
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 30/301 (9%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRL 68
A R F+ + VS +ISGYL+ F A LF MP+R +V+WN ++ G+ + R
Sbjct: 147 ARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRN 206
Query: 69 GDARRLFDSMPQKDVVSWN--------AMLSGYAQNGYADEAREVFYQMPHK--NAISWN 118
+A F M ++ VV N +S A +G + K N WN
Sbjct: 207 EEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWN 266
Query: 119 GLLAAYVHNGRIEEACRLFDSKSDWE--LISWNCLMGGFVKRKMLGAARKLFDKMHVRDV 176
L++ Y G +E++ F+ + + ++SWN ++ G+ A +F+KM V+D
Sbjct: 267 SLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM-VKDT 325
Query: 177 -----------VSWNTMISGYAQDGDM--SQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 223
V + +G Q+G M ++A N +D ++ + MV ++G
Sbjct: 326 NLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRF 385
Query: 224 DEARTFFDQMPQKNEISY-NAMVAG-YVQSNK--MDMARELFEAMPSRNVSSWNTMITGY 279
EA MP I + A++ G + SNK +A + R+VSS+ + Y
Sbjct: 386 KEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAY 445
Query: 280 G 280
Sbjct: 446 S 446
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 276/514 (53%), Gaps = 23/514 (4%)
Query: 87 NAMLSGYAQNGYA-DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL 145
N++LS Y + G E R VF K+AISW +++ YV +A +F + L
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 146 ISWNCLMGGFVKR-KMLGAAR--KLFDKMHVRDVVSWNTMISG-----YAQDGDMSQAKN 197
+ + VK LG R + F + + WN IS Y + + A+
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARR 219
Query: 198 LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS-----N 252
+FD+ P DV WTA++S + +N + +EA F M + + + G V +
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 253 KMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 308
++ +E+ + + NV ++++ YG+ G + +AR++F+ M +++ VSW+A++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 309 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET 368
GY Q G +E+A IEI R+ E + F L CA +AA+ LGK+IHGQ V+ G
Sbjct: 340 GYCQNGEHEKA----IEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 395
Query: 369 GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK 428
V +AL+ +Y K G I A+ V+ + +++++WN M++ A++G G++A+ F M
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 429 TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 488
G+KPD I+ + +L+AC H G++D G YF M K Y + P ++HY+CMIDLLGRAG
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLF 515
Query: 489 EEAQDLMRNMPFEPPAASWGALLGASRIHGN-TELGEKAAEMVFKMEPHNSGMYVLLSNL 547
EEA++L+ A+ WG LLG + + + + E+ A+ + ++EP YVLLSN+
Sbjct: 516 EEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNM 575
Query: 548 YAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQ 581
Y A GR DA N+R M GV K G SW++
Sbjct: 576 YKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDAH 609
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 195/422 (46%), Gaps = 23/422 (5%)
Query: 11 RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRN-RRLG 69
RVF+ + ++S+ +M+SGY+ A ++F +M L + L+ V+ LG
Sbjct: 118 RVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELG 177
Query: 70 DAR--RLFDSMPQKDVVSWNAMLSG-----YAQNGYADEAREVFYQMPHKNAISWNGLLA 122
+ R R F + WN +S Y N +AR VF +MP + I W +L+
Sbjct: 178 EVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLS 237
Query: 123 AYVHNGRIEEACRLFDSKSDWELI-----SWNCLMGGFVKRKMLGAARKLFDKMHVR--- 174
A+ N EEA LF + + + ++ ++ + L +++ K+
Sbjct: 238 AFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIG 297
Query: 175 -DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 233
+VV ++++ Y + G + +A+ +F+ ++ +W+A++ GY QNG ++A F +M
Sbjct: 298 SNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Query: 234 PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQAR 289
+K+ + ++ + + +E+ R NV + +I YG++G I A
Sbjct: 358 EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
+++ M R+ ++W A++S AQ G EEA++ F ++ + G + +F L+ C
Sbjct: 418 RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 350 ALELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTM 407
++ G+ + K+ G + G + ++ + + G EA ++ E E D W +
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 408 IA 409
+
Sbjct: 538 LG 539
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 174/381 (45%), Gaps = 60/381 (15%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ-RDLV----SWNVMLTGYV 63
A RVF+ MP + + A++S + +N + A LF M + + LV ++ +LT
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 64 RNRRLGDAR----RLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG 119
RRL + +L + +VV +++L Y + G EAR+VF M KN++SW+
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 120 LLAAYVHNGRIEEACRLFDSKSDWELISWNCLM----------------GGFVKRKMLG- 162
LL Y NG E+A +F + +L + ++ G +V+R G
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN 396
Query: 163 ------------------AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD---- 200
+A +++ KM +R++++WN M+S AQ+G +A + F+
Sbjct: 397 VIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVK 456
Query: 201 QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMD 255
+ D ++ A+++ GM+DE R +F M + I Y+ M+ ++ +
Sbjct: 457 KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFE 516
Query: 256 MARELFEAMPSRNVSS-WNTMITGYGQNGDIAQ-----ARKLFDMMPQRDCVSWAAIISG 309
A L E RN +S W ++ N D ++ A+++ ++ P+ +S+ + +
Sbjct: 517 EAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYH-MSYVLLSNM 575
Query: 310 YAQTGHYEEALNMFIEIKRDG 330
Y G + +ALN+ + R G
Sbjct: 576 YKAIGRHGDALNIRKLMVRRG 596
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Query: 312 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 371
+ G EA+ + ++ L TC + + G Q H VVK+G ET
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 372 VGNALLGMYFKCG-SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 430
VGN+LL +YFK G + E VF+G KD +SW +M++GY +AL VF M +
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 431 GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEE 490
G+ +E T+ + ACS G + G F+ + + + + + L G +
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLG-RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 216
Query: 491 AQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 533
A+ + MP EP W A+L A +L E+A + + M
Sbjct: 217 ARRVFDEMP-EPDVICWTAVLSA---FSKNDLYEEALGLFYAM 255
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 134/308 (43%), Gaps = 47/308 (15%)
Query: 4 GHCDS---ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
G C S A +VFN M +++SVS++A++ GY +N A ++F +M ++DL + +L
Sbjct: 311 GKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLK 370
Query: 61 GYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS 116
+ + + ++ +V+ +A++ Y ++G D A V+ +M +N I+
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT 430
Query: 117 WNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV 176
WN +L+A NGR EEA F+ VK+ + D
Sbjct: 431 WNAMLSALAQNGRGEEAVSFFND---------------MVKKGI------------KPDY 463
Query: 177 VSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFD 231
+S+ +++ G + + +N F ++ M+ + G+ +EA +
Sbjct: 464 ISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Query: 232 QMPQKNEISYNAMVAGYVQSN------KMDMARELFEAMPSRNVSS--WNTMITGYGQNG 283
+ +N+ S ++ G +N +A+ + E P ++S + M G++G
Sbjct: 524 RAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHG 583
Query: 284 DIAQARKL 291
D RKL
Sbjct: 584 DALNIRKL 591
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 253/434 (58%), Gaps = 17/434 (3%)
Query: 161 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSG 216
L AR++FD++ + ++N MISGY + G + + L + + D +T + ++
Sbjct: 85 LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKA 144
Query: 217 YVQNGM----------LDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPS 266
G L AR + + +++ A+V YV+S K++ AR +FE M
Sbjct: 145 SNSRGSTMILPRSLCRLVHARIIKCDV-ELDDVLITALVDTYVKSGKLESARTVFETMKD 203
Query: 267 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHY-EEALNMFIE 325
NV +MI+GY G + A ++F+ +D V + A++ G++++G + +++M+I
Sbjct: 204 ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYIS 263
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 385
++R G N STF+ + C+ + + E+G+Q+H Q++K+G T +G++LL MY KCG
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG 323
Query: 386 IGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 445
I +A VF+ ++EK+V SW +MI GY ++G ++AL +F MK ++P+ +T +G LSA
Sbjct: 324 INDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSA 383
Query: 446 CSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 505
CSH+GL+D+G E F SM +DYS+ P +HY C++DL+GRAG L +A + R MP P +
Sbjct: 384 CSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSD 443
Query: 506 SWGALLGASRIHGNTELGEKAAEMVFKMEP-HNSGMYVLLSNLYAASGRWADAGNMRSRM 564
W ALL + +HGN EL AA +FK+ G Y+ LSN+YA++ +W + +R M
Sbjct: 444 IWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVM 503
Query: 565 RDVGVQKVTGYSWV 578
+ + K G SW
Sbjct: 504 KRRRISKTIGRSWT 517
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 182/390 (46%), Gaps = 48/390 (12%)
Query: 13 FNTMPRR---SSVSYNAMISGYLR--------NARFSLARDLFDKMPQRDLVSWNVMLTG 61
++T P + SS+S I+G L+ A + D+ Q DL +L
Sbjct: 19 YSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLIL 78
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISW 117
+++ L AR++FD +P+ + ++N M+SGY ++G E + +M + + +
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 118 NGLLAAYVHNGRI----EEACRLFDS---KSDWEL--ISWNCLMGGFVKRKMLGAARKLF 168
+ +L A G CRL + K D EL + L+ +VK L +AR +F
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 169 DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEART 228
+ M +VV +MISGY G + A+ +F+ + +D+ + AMV G+ ++G + A+
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSG--ETAKR 256
Query: 229 FFDQMPQKNEISYNAMVAGY---------VQSNKM--DMARELFEAMPSRNVSSWNTMIT 277
D ++ ++ + + S+++ + ++ ++ ++ ++++
Sbjct: 257 SVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
Query: 278 GYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 337
Y + G I AR++FD M +++ SW ++I GY + G+ EEAL +F +K N T
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 338 FSCALSTCADIAALELGKQIHGQVVKTGYE 367
F ALS C+ H +V GYE
Sbjct: 377 FLGALSACS-----------HSGLVDKGYE 395
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 180/386 (46%), Gaps = 71/386 (18%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLR--------------------------- 33
++ G A +VF+ +P+ + +YN MISGYL+
Sbjct: 80 LKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLS 139
Query: 34 ------NAR-------FSLARDLFDKMPQRDLVSWNVMLTG----YVRNRRLGDARRLFD 76
N+R SL R + ++ + D+ +V++T YV++ +L AR +F+
Sbjct: 140 MVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFE 199
Query: 77 SMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL 136
+M ++VV +M+SGY G+ ++A E+F K+ + +N ++ + +G E A R
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSG--ETAKRS 257
Query: 137 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFD-----KMHVRDVVS--------WNTMI 183
D + ++ + F ++GA L ++H + + S ++++
Sbjct: 258 VDMYISMQRAGFHPNISTFA--SVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLL 315
Query: 184 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEI 239
YA+ G ++ A+ +FDQ ++VF+WT+M+ GY +NG +EA F +M + N +
Sbjct: 316 DMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYV 375
Query: 240 SYNAMVAGYVQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQNGDIAQARKLFDM 294
++ ++ S +D E+FE+M + + ++ G+ GD+ +A +
Sbjct: 376 TFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARA 435
Query: 295 MPQR-DCVSWAAIISGYAQTGHYEEA 319
MP+R D WAA++S G+ E A
Sbjct: 436 MPERPDSDIWAALLSSCNLHGNVELA 461
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 159/325 (48%), Gaps = 26/325 (8%)
Query: 31 YLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGD----ARRLFDSMPQKDVVSW 86
+L+ S AR +FD++P+ L ++N M++GY+++ + + +R+ S + D +
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 87 NAMLSGYAQNGYADEAREVFYQMPHKNAISWN---------GLLAAYVHNGRIEEACRLF 137
+ +L G ++ H I + L+ YV +G++E A +F
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 138 DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK- 196
++ D ++ ++ G++ + + A ++F+ V+D+V +N M+ G+++ G+ ++
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSV 258
Query: 197 ----NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY----NAMVAGY 248
++ H ++ T+ +++ + + Q+ + ++ ++++ Y
Sbjct: 259 DMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Query: 249 VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWA 304
+ ++ AR +F+ M +NV SW +MI GYG+NG+ +A +LF M + + V++
Sbjct: 319 AKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFL 378
Query: 305 AIISGYAQTGHYEEALNMFIEIKRD 329
+S + +G ++ +F ++RD
Sbjct: 379 GALSACSHSGLVDKGYEIFESMQRD 403
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 161/340 (47%), Gaps = 25/340 (7%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK 81
V A++ Y+++ + AR +F+ M ++V M++GY+ + DA +F++ K
Sbjct: 176 VLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK 235
Query: 82 DVVSWNAMLSGYAQNG-YADEAREVFYQMP----HKNAISWNGLLAA----YVHNGRIEE 132
D+V +NAM+ G++++G A + +++ M H N ++ ++ A H +
Sbjct: 236 DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQV 295
Query: 133 ACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDM 192
++ S + + L+ + K + AR++FD+M ++V SW +MI GY ++G+
Sbjct: 296 HAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNP 355
Query: 193 SQAKNLFDQSP----HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNA 243
+A LF + + T+ +S +G++D+ F+ M + + Y
Sbjct: 356 EEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYAC 415
Query: 244 MVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITGYGQNGDIA----QARKLFDMMPQR 298
+V ++ ++ A E AMP R S W +++ +G++ A +LF + +
Sbjct: 416 IVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADK 475
Query: 299 DCVSWAAIISGYAQTGHYEEA--LNMFIEIKRDGESLNRS 336
++ A+ + YA ++ + ++ +R +++ RS
Sbjct: 476 RPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 65/313 (20%)
Query: 283 GDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 342
G ++ AR++FD +P+ ++ +ISGY + G +E L + + GE + T S L
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 343 STCAD-----IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE 397
I L + +H +++K E + AL+ Y K G + A VFE ++
Sbjct: 143 KASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK 202
Query: 398 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
+++VV +MI+GY GF + A +F + K
Sbjct: 203 DENVVCCTSMISGYMNQGFVEDAEEIFNTTKV---------------------------- 234
Query: 458 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL-EEAQDL---MRNMPFEPPAASWGALLGA 513
KD V Y M++ R+G + + D+ M+ F P +++ +++GA
Sbjct: 235 ------KDIVV------YNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGA 282
Query: 514 SRIHGNTELGEKAAEMVFKMEPHNSGMYV------LLSNLYAASGRWADAGNMRSRMRDV 567
+ + E+G++ + K SG+Y L ++YA G DA + +M++
Sbjct: 283 CSVLTSHEVGQQVHAQIMK-----SGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK 337
Query: 568 GVQKVTGYSWVEV 580
V +SW +
Sbjct: 338 NV-----FSWTSM 345
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Query: 326 IKRDGESLNRSTF-SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 384
+K++ SL+ + + + AL + A + GK+IH ++KTG++ + LL ++ KCG
Sbjct: 24 LKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCG 83
Query: 385 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 444
+ A VF+ + + + ++N MI+GY +HG K+ L++ + M G K D T+ VL
Sbjct: 84 CLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLK 143
Query: 445 ACSHAG---LIDRG-TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF 500
A + G ++ R ++ V T ++D ++G+LE A+ + M
Sbjct: 144 ASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD 203
Query: 501 E 501
E
Sbjct: 204 E 204
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 134/334 (40%), Gaps = 61/334 (18%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
+++G +SA VF TM + V +MISGY+ A ++F+ +D+V +N M+
Sbjct: 186 VKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVE 245
Query: 61 GYVRN--------------RRLG------------DARRLFDSMPQKDVVSWNAMLSG-- 92
G+ R+ +R G A + S V M SG
Sbjct: 246 GFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVY 305
Query: 93 ------------YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSK 140
YA+ G ++AR VF QM KN SW ++ Y NG EEA LF
Sbjct: 306 THIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRM 365
Query: 141 SDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMHVRD------VVSWNTMISGYAQDG 190
++ + +++ + ++ ++F+ M RD + + ++ + G
Sbjct: 366 KEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ-RDYSMKPKMEHYACIVDLMGRAG 424
Query: 191 DMSQAKNLFDQSPHQ-DVFTWTAMVSGYVQNGMLD----EARTFFDQMPQKNEISYNAMV 245
D+++A P + D W A++S +G ++ A F K +Y A+
Sbjct: 425 DLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALS 484
Query: 246 AGYVQSNKMDMARELFEAMPSRNVS-----SWNT 274
Y ++K D ++ E M R +S SW +
Sbjct: 485 NVYASNDKWDNVSKIREVMKRRRISKTIGRSWTS 518
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 262/479 (54%), Gaps = 14/479 (2%)
Query: 148 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------ 201
WN L+ +++ G A K+F +M DV S+N MI GYA+ G +A L+ +
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 202 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ----MPQKNEISYNAMVAGYVQSNKMDMA 257
P + + G++ + L + + + + N I NA++ Y + + +A
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 258 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 317
+ F+AM +++ SWNTM+ G+ + GD+ A+ +FD MP+RD VSW +++ GY++ G +
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 318 EAL-NMFIEIK-RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 375
+ +F E+ + +R T +S A+ L G+ +HG V++ + F+ +A
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSA 408
Query: 376 LLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 435
L+ MY KCG I A VF+ EKDV W +MI G A HG G+QAL +F M+ GV P+
Sbjct: 409 LIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPN 468
Query: 436 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLM 495
+T++ VL+ACSH+GL++ G F M + P ++HY ++DLL RAGR+EEA+D++
Sbjct: 469 NVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIV 528
Query: 496 -RNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRW 554
+ MP P + WG++L A R + E E A + K+EP G YVLLSN+YA GRW
Sbjct: 529 QKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRW 588
Query: 555 ADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD-CFHPEKDRIYAFLEELDLKMR 612
+ R M + GV+K GYS V +H+F + HP I L+ L +M+
Sbjct: 589 GYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 179/366 (48%), Gaps = 31/366 (8%)
Query: 55 WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP---- 110
WN ++ Y+ G A ++F MP DV S+N M+ GYA+ G++ EA +++++M
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 111 HKNAISWNGLLAAYVH----------NGRIEEACRLFDSKSDWELISWNCLMGGFVKRKM 160
+ + LL H +G IE ++ S LI N L+ + K K
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN----LILSNALLDMYFKCKE 284
Query: 161 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN 220
G A++ FD M +D+ SWNTM+ G+ + GDM A+ +FDQ P +D+ +W +++ GY +
Sbjct: 285 SGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKK 344
Query: 221 GMLDE--ARTFFDQMP-----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS-- 271
G D+ R F +M + + ++ ++++G + ++ R + + +
Sbjct: 345 G-CDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDA 403
Query: 272 --WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
+ +I Y + G I +A +F ++D W ++I+G A G+ ++AL +F ++ +
Sbjct: 404 FLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEE 463
Query: 330 GESLNRSTFSCALSTCADIAALELGKQIHGQVV-KTGYETGCFVGNALLGMYFKCGSIGE 388
G + N T L+ C+ +E G + + K G++ +L+ + + G + E
Sbjct: 464 GVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEE 523
Query: 389 ANDVFE 394
A D+ +
Sbjct: 524 AKDIVQ 529
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 24 YNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----- 78
+N+++ Y+ F +A +F +MP D+ S+NVM+ GY + +A +L+ M
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 79 -PQKDVVSWNAMLSGYAQN--------GYADEAREVFYQMPHKNAISWNGLLAAYVHNGR 129
P + V + G+ + G+ + V+ N I N LL Y
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVY----SSNLILSNALLDMYFKCKE 284
Query: 130 IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQD 189
A R FD+ ++ SWN ++ GFV+ + AA+ +FD+M RD+VSWN+++ GY++
Sbjct: 285 SGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKK 344
Query: 190 G-DMSQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLDEAR----TFFDQMPQKNEI 239
G D + LF + D T +++SG NG L R + +
Sbjct: 345 GCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAF 404
Query: 240 SYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR- 298
+A++ Y + ++ A +F+ ++V+ W +MITG +G+ QA +LF M +
Sbjct: 405 LSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG 464
Query: 299 ---DCVSWAAIISGYAQTGHYEEALNMFIEIK 327
+ V+ A+++ + +G EE L++F +K
Sbjct: 465 VTPNNVTLLAVLTACSHSGLVEEGLHVFNHMK 496
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 156/320 (48%), Gaps = 32/320 (10%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
NA++ Y + LA+ FD M ++D+ SWN M+ G+VR + A+ +FD MP++D+V
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 85 SWNAMLSGYAQNGYADEA-REVFYQMP-----HKNAISWNGLLAAYVHNGRIEE------ 132
SWN++L GY++ G RE+FY+M + ++ L++ +NG +
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 133 -ACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 191
RL K D L S L+ + K ++ A +F +DV W +MI+G A G+
Sbjct: 393 LVIRL-QLKGDAFLSS--ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 192 MSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YN 242
QA LF + + V T A+++ +G+++E F+ M K Y
Sbjct: 450 GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYG 509
Query: 243 AMVAGYVQSNKMDMARELFE-AMPSR-NVSSWNTMITGYGQNGDIAQAR----KLFDMMP 296
++V ++ +++ A+++ + MP R + S W ++++ DI A +L + P
Sbjct: 510 SLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEP 569
Query: 297 QRDCVSWAAIISGYAQTGHY 316
+++ + + + YA G +
Sbjct: 570 EKEG-GYVLLSNIYATVGRW 588
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 190/473 (40%), Gaps = 100/473 (21%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSL-ARDLFDKMP----------- 48
M G+ A +VF MP S+N MI GY + FSL A L+ KM
Sbjct: 177 MELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG-FSLEALKLYFKMVSDGIEPDEYTV 235
Query: 49 ------------------------------QRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
+L+ N +L Y + + G A+R FD+M
Sbjct: 236 LSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAM 295
Query: 79 PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD 138
+KD+ SWN M+ G+ + G + A+ VF QMP ++ +SWN LL Y G C D
Sbjct: 296 KKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG-----C---D 347
Query: 139 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV-----RDVVSWNTMISGYAQDGDMS 193
++ R+LF +M + D V+ ++ISG A +G++S
Sbjct: 348 QRT----------------------VRELFYEMTIVEKVKPDRVTMVSLISGAANNGELS 385
Query: 194 QAK----NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV 249
+ + D F +A++ Y + G+++ A F +K+ + +M+ G
Sbjct: 386 HGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLA 445
Query: 250 QSNKMDMARELFEAMPSRNVSSWNT----MITGYGQNGDIAQARKLFDMMPQR-----DC 300
A +LF M V+ N ++T +G + + +F+ M + +
Sbjct: 446 FHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPET 505
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 360
+ +++ + G EEA + I K+ ++S + LS C +E + +
Sbjct: 506 EHYGSLVDLLCRAGRVEEAKD--IVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTE 563
Query: 361 VVKTGYET-GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYA 412
++K E G +V L +Y G G ++ E +E + V AGY+
Sbjct: 564 LLKLEPEKEGGYV--LLSNIYATVGRWGYSDKTREAMENRGV----KKTAGYS 610
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 141/328 (42%), Gaps = 48/328 (14%)
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
Y +N D+A+ L + P + + +IS + + + E ++ + R S +R TF
Sbjct: 80 YPENLDLAKLLFL-NFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTF 136
Query: 339 SCALSTCADIAALELGKQIHGQVVKTG-YETGCFVGNALLGMYFKCGSIGEANDVFEGIE 397
+ + ++ + KQIH ++ +G G ++ N+L+ Y + G+ G A VF +
Sbjct: 137 LYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 398 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
DV S+N MI GYA+ GF +AL ++ M + G++PDE T++ +L C H I G
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKG 253
Query: 458 Y---------FYSMNKDYSVTPSSKHYTC-----------------------MIDLLGRA 485
YS N S ++ C M+ R
Sbjct: 254 VHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRL 313
Query: 486 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE--LGEKAAEM--VFKMEPHNSGMY 541
G +E AQ + MP + SW +LL G + + E EM V K++P M
Sbjct: 314 GDMEAAQAVFDQMP-KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 542 VLLS----NLYAASGRWADAGNMRSRMR 565
L+S N + GRW +R +++
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLK 400
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/624 (28%), Positives = 324/624 (51%), Gaps = 29/624 (4%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARF-SLARDLFDKM------PQRDLV 53
+R G + A +VF+ MP R+ VSYNA+ S Y RN F S A L M P
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 54 SWNVMLTGYVRNRRLGDA--RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
+ V + + + +G + ++ +VV ++L Y+ G + AR +F + +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKL 167
++A++WN ++ + N +IE+ F S D +++ ++ G K + +
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 168 FDKMHVRDVVSW----NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 223
++ V D ++ N ++ Y GDM +A +F + + ++ +W +++SG +NG
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 224 DEARTFFDQM-----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSWNT 274
++A + ++ P+ +E +++A ++ + + + L + R+V T
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTT 442
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
+++ Y +N + A+K+FD+M +RD V W +I G+++ G+ E A+ FIE+ R+ +
Sbjct: 443 LLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSD 502
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
+ S + C+D+A L G+ H ++TG++ V AL+ MY K G A +F
Sbjct: 503 GFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFS 562
Query: 395 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR 454
D+ WN+M+ Y++HG ++AL FE + G PD +T + +L+ACSH G +
Sbjct: 563 LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQ 622
Query: 455 GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLM-RNMPFEPPAASWGALLGA 513
G ++ ++ K+ + KHY+CM++L+ +AG ++EA +L+ ++ P A W LL A
Sbjct: 623 G-KFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSA 681
Query: 514 SRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVT 573
N ++G AAE + K++P ++ ++LLSNLYA +GRW D MR ++R + K
Sbjct: 682 CVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDP 741
Query: 574 GYSWVEV-QNKIHKFTVGDCFHPE 596
G SW+EV N F+ GD +PE
Sbjct: 742 GLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/564 (25%), Positives = 257/564 (45%), Gaps = 70/564 (12%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSW--------NVMLTGYVRNR--RLGDARRL 74
N +IS Y+R + AR +FDKMPQR++V+ V + + ++ +LG + +
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 75 FDSMPQKDVVSW---------------------------------------NAMLSGYAQ 95
F MP ++ S N ++S Y +
Sbjct: 86 F-FMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 96 NGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWN------ 149
G ++AR+VF +MPH+N +S+N L +AY N + +E + N
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 150 -CLMGGFVKRKMLGAA--RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD 206
+ ++ ++G++ ++ + +VV +++ Y+ GD+ A+ +FD ++D
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRD 264
Query: 207 VFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELF- 261
W M+ G ++N +++ FF M + +Y+ ++ G + + + +
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHA 324
Query: 262 EAMPSRNVSSW---NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 318
+ S +++ N ++ Y GD+ +A +F + + VSW +IISG ++ G E+
Sbjct: 325 RIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQ 384
Query: 319 ALNMFIEIKR-DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 377
A+ M+ + R + TFS A+S A+ GK +HGQV K GYE FVG LL
Sbjct: 385 AMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLL 444
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
MYFK A VF+ ++E+DVV W MI G++R G + A+ F M + D
Sbjct: 445 SMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGF 504
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
++ V+ ACS ++ +G E F+ + ++D+ G+ G+ E A+ + +
Sbjct: 505 SLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIF-S 562
Query: 498 MPFEPPAASWGALLGASRIHGNTE 521
+ P W ++LGA HG E
Sbjct: 563 LASNPDLKCWNSMLGAYSQHGMVE 586
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 216/367 (58%), Gaps = 4/367 (1%)
Query: 242 NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCV 301
N ++ Y AR+LF+ MP +N+ +WN+++ Y ++GD+ AR +FD M +RD V
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 302 SWAAIISGYAQTGHYEEALNMFIEIKRDGES-LNRSTFSCALSTCADIAALELGKQIHGQ 360
+W+++I GY + G Y +AL +F ++ R G S N T + CA + AL GK +H
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 361 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVF--EGIEEKDVVSWNTMIAGYARHGFGK 418
++ + +L+ MY KCGSIG+A VF ++E D + WN +I G A HGF +
Sbjct: 267 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 326
Query: 419 QALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCM 478
++L +F M+ + PDEIT + +L+ACSH GL+ +F S+ K+ P S+HY CM
Sbjct: 327 ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACM 385
Query: 479 IDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNS 538
+D+L RAG +++A D + MP +P + GALL HGN EL E + + +++PHN
Sbjct: 386 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHND 445
Query: 539 GMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKD 598
G YV L+N+YA + ++ A +MR M GV+K+ G+S +++ H+F D H D
Sbjct: 446 GRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSD 505
Query: 599 RIYAFLE 605
+IYA L+
Sbjct: 506 KIYAVLQ 512
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 148/316 (46%), Gaps = 27/316 (8%)
Query: 40 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 99
AR LFD+MP ++LV+WN +L Y ++ + AR +FD M ++DVV+W++M+ GY + G
Sbjct: 162 ARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEY 221
Query: 100 DEAREVFYQM-----PHKNAISWNGLLAAYVHNGRIEEACR----LFDSKSDWELISWNC 150
++A E+F QM N ++ ++ A H G + + D +I
Sbjct: 222 NKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 151 LMGGFVKRKMLGAARKLFDKMHVR--DVVSWNTMISGYAQDGDMSQAKNLF----DQSPH 204
L+ + K +G A +F + V+ D + WN +I G A G + ++ LF +
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 205 QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-----KNEISYNAMVAGYVQSNKMDMARE 259
D T+ +++ G++ EA FF + + K+E Y MV ++ + A +
Sbjct: 342 PDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSE-HYACMVDVLSRAGLVKDAHD 400
Query: 260 LFEAMPSRNVSS-WNTMITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAIISGYAQTG 314
MP + S ++ G +G++ A +KL ++ P D + + + YA
Sbjct: 401 FISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDG-RYVGLANVYAINK 459
Query: 315 HYEEALNMFIEIKRDG 330
+ A +M +++ G
Sbjct: 460 QFRAARSMREAMEKKG 475
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 277 TGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRS 336
+ +GD+ A K + W +I G++ + + E++++++I++ R G +
Sbjct: 50 SALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHM 109
Query: 337 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 396
T+ + + + ++ +LG +H VVK+G E F+ N L+ MY A +F+ +
Sbjct: 110 TYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEM 169
Query: 397 EEKDVVSWNTM-------------------------------IAGYARHGFGKQALMVFE 425
K++V+WN++ I GY + G +AL +F+
Sbjct: 170 PHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFD 229
Query: 426 SMKTIG-VKPDEITMVGVLSACSHAGLIDRG-TEYFYSMNKDYSVTPSSKHYTCMIDLLG 483
M +G K +E+TMV V+ AC+H G ++RG T + Y ++ +T + T +ID+
Sbjct: 230 QMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ--TSLIDMYA 287
Query: 484 RAGRLEEAQDLM-RNMPFEPPAASWGALLGASRIHG 518
+ G + +A + R E A W A++G HG
Sbjct: 288 KCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 144/331 (43%), Gaps = 26/331 (7%)
Query: 13 FNTMPRRSSVSYNAMISGYLRNARF--SLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGD 70
F +P + + S L N + SL + + DL N ++ Y R
Sbjct: 102 FGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQAS 161
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 130
AR+LFD MP K++V+WN++L YA++G AR VF +M ++ ++W+ ++ YV G
Sbjct: 162 ARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEY 221
Query: 131 EEACRLFDS--------KSDWELISWNCL---MGGFVKRKMLGAARKLFDKMHVRDVVSW 179
+A +FD ++ ++S C +G + K + R + D V+
Sbjct: 222 NKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTV--HRYILDVHLPLTVILQ 279
Query: 180 NTMISGYAQDGDMSQAKNLFDQSP--HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK- 236
++I YA+ G + A ++F ++ D W A++ G +G + E+ F +M +
Sbjct: 280 TSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESK 339
Query: 237 ---NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQAR 289
+EI++ ++A + A F+++ + M+ + G + A
Sbjct: 340 IDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAH 399
Query: 290 KLFDMMPQRDCVS-WAAIISGYAQTGHYEEA 319
MP + S A+++G G+ E A
Sbjct: 400 DFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 144/316 (45%), Gaps = 27/316 (8%)
Query: 8 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRR 67
SA ++F+ MP ++ V++N+++ Y ++ AR +FD+M +RD+V+W+ M+ GYV+
Sbjct: 161 SARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGE 220
Query: 68 LGDARRLFDSM-----PQKDVVSWNAMLSGYAQNGYADEAREVF-----YQMPHKNAISW 117
A +FD M + + V+ +++ A G + + V +P I
Sbjct: 221 YNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLP-LTVILQ 279
Query: 118 NGLLAAYVHNGRIEEACRLF--DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR- 174
L+ Y G I +A +F S + + + WN ++GG + + +LF KM
Sbjct: 280 TSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESK 339
Query: 175 ---DVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
D +++ +++ + G + +A K+L + + MV + G++ +A
Sbjct: 340 IDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAH 399
Query: 228 TFFDQMPQKNEIS-YNAMVAGYVQSNKMDMA----RELFEAMPSRNVSSWNTMITGYGQN 282
F +MP K S A++ G + +++A ++L E P N + + Y N
Sbjct: 400 DFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQP-HNDGRYVGLANVYAIN 458
Query: 283 GDIAQARKLFDMMPQR 298
AR + + M ++
Sbjct: 459 KQFRAARSMREAMEKK 474
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 129/291 (44%), Gaps = 23/291 (7%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWN--VML 59
++G SA VF+ M R V++++MI GY++ ++ A ++FD+M + N M+
Sbjct: 186 KSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMV 245
Query: 60 TGYVRNRRLGDARR-------LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK 112
+ LG R + D V+ +++ YA+ G +A VFY+ K
Sbjct: 246 SVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK 305
Query: 113 --NAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLGAARK 166
+A+ WN ++ +G I E+ +LF +SK D + I++ CL+ ++ A
Sbjct: 306 ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWH 365
Query: 167 LFDKMHVRDVVS----WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT-AMVSGYVQNG 221
F + + M+ ++ G + A + + P + + A+++G + +G
Sbjct: 366 FFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHG 425
Query: 222 MLDEARTF---FDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 269
L+ A T ++ N+ Y + Y + + AR + EAM + V
Sbjct: 426 NLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGV 476
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/634 (29%), Positives = 321/634 (50%), Gaps = 60/634 (9%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQRDLVSW 55
+ G D A +VF+ +P R++V++NA++ GY++N + A LF M P R VS
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 56 NVMLT---GYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK 112
+ + G V + A + + M +++ ++L+ Y + G + A VF +M K
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEK 338
Query: 113 NAISWNGLLAAYVHNGRIEEA---CRLFD-SKSDWELISWNCLMGGFVKRK--MLGAARK 166
+ ++WN +++ YV G +E+A C+L K ++ ++ LM + + LG +
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 167 LFDKMHV--RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLD 224
+ H D+V +T++ YA+ G + AK +FD + +D+ W +++ Y ++G+
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 225 EARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMI 276
EA F M + N I++N ++ +++ ++D A+++F M S N+ SW TM+
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 277 TGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRS 336
G QNG C EEA+ +++ G N
Sbjct: 519 NGMVQNG----------------C---------------SEEAILFLRKMQESGLRPNAF 547
Query: 337 TFSCALSTCADIAALELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEANDVFEG 395
+ + ALS CA +A+L +G+ IHG +++ + + + +L+ MY KCG I +A VF
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Query: 396 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
++ N MI+ YA +G K+A+ ++ S++ +G+KPD IT+ VLSAC+HAG I++
Sbjct: 608 KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQA 667
Query: 456 TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASR 515
E F + S+ P +HY M+DLL AG E+A L+ MPF+P A +L+ +
Sbjct: 668 IEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCN 727
Query: 516 IHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGY 575
TEL + + + + EP NSG YV +SN YA G W + MR M+ G++K G
Sbjct: 728 KQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGC 787
Query: 576 SWVEV--QNKIHKFTVGDCFHPEKDRIYAFLEEL 607
SW+++ + +H F D H + I L L
Sbjct: 788 SWIQITGEEGVHVFVANDKTHTRINEIQMMLALL 821
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 130/539 (24%), Positives = 246/539 (45%), Gaps = 56/539 (10%)
Query: 75 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEAC 134
F+++P K S +S + + DE Q ++ S+ +++ NG I+EA
Sbjct: 6 FNTIPNKVPFS----VSSKPSSKHHDE------QAHSPSSTSYFHRVSSLCKNGEIKEAL 55
Query: 135 RLFDSKSDWELIS-----WNCLMGGFVKRKMLGAARKLFDKM------HVRDVVSWNTMI 183
L ++ D+ + + ++ G V + L +++ ++ + R+ ++
Sbjct: 56 SLV-TEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLV 114
Query: 184 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNA 243
YA+ + A+ LF + ++VF+W A++ + G+ + A F +M + NEI +
Sbjct: 115 IFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE-NEIFPD- 172
Query: 244 MVAGYVQSNKMDMARELFEAMPSRNVSSW-------------NTMITGYGQNGDIAQARK 290
+V N L + R V + +++ YG+ G + A K
Sbjct: 173 ---NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASK 229
Query: 291 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 350
+FD +P R+ V+W A++ GY Q G EEA+ +F ++++ G R T S LS A++
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG 289
Query: 351 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 410
+E GKQ H + G E +G +LL Y K G I A VF+ + EKDVV+WN +I+G
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 411 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE---YFYSMNKDYS 467
Y + G + A+ + + M+ +K D +T+ ++SA + + G E Y + +
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 468 VTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAA 527
+ +S ++D+ + G + +A+ + + E W LL A + + L +A
Sbjct: 410 IVLAST----VMDMYAKCGSIVDAKKVF-DSTVEKDLILWNTLLAA---YAESGLSGEAL 461
Query: 528 EMVFKMEPHNSGMYVLLSNLYAAS----GRWADAGNMRSRMRDVGVQKVTGYSWVEVQN 582
+ + M+ V+ NL S G+ +A +M +M+ G+ SW + N
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIP-NLISWTTMMN 519
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 204/455 (44%), Gaps = 103/455 (22%)
Query: 124 YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSW 179
Y G +++A ++FD D ++WN LM G+V+ A +LF M + V V+
Sbjct: 218 YGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTV 277
Query: 180 NTMISGYAQDGDMSQAKN-----------------------------------LFDQSPH 204
+T +S A G + + K +FD+
Sbjct: 278 STCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFE 337
Query: 205 QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYN-----AMVAGYVQSNKMDMARE 259
+DV TW ++SGYVQ G++++A + Q+ + ++ Y+ +++ ++ + + +E
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDA-IYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 260 L--------FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYA 311
+ FE+ ++ +T++ Y + G I A+K+FD ++D + W +++ YA
Sbjct: 397 VQCYCIRHSFES----DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYA 452
Query: 312 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 371
++G EAL +F ++ +G N T+
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITW--------------------------------- 479
Query: 372 VGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESM 427
N ++ + G + EA D+F ++ +++SW TM+ G ++G ++A++ M
Sbjct: 480 --NLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Query: 428 KTIGVKPDEITMVGVLSACSH-AGL-IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 485
+ G++P+ ++ LSAC+H A L I R + N +S S + T ++D+ +
Sbjct: 538 QESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIE--TSLVDMYAKC 595
Query: 486 GRLEEAQDLMRNMPF-EPPAASWGALLGASRIHGN 519
G + +A+ + + + E P ++ A++ A ++GN
Sbjct: 596 GDINKAEKVFGSKLYSELPLSN--AMISAYALYGN 628
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 184/649 (28%), Positives = 322/649 (49%), Gaps = 65/649 (10%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 81
+++++ Y + + AR +F++M +RD+V W M+ Y R +G+A L + M +
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 82 ---------------------------------DVVSWNAMLSGYAQNGYADEAREVFYQ 108
D+ N+ML+ Y + + +A+++F Q
Sbjct: 145 PGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQ 204
Query: 109 MPHKNAISWNGLLAAYVHNGRIEEACRLF----------DSKSDWELISWNCLMGGFVKR 158
M ++ +SWN +++ Y G + E +L D ++ +S + M
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 159 KMLGA--ARKLFD-KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 215
+ML + FD MH++ +I+ Y + G + + + P++DV WT M+S
Sbjct: 265 RMLHCQIVKTGFDVDMHLK-----TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMIS 319
Query: 216 GYVQNGMLDEARTFFDQMPQK-NEISYNAM---VAGYVQSNKMDMARELFEAMP----SR 267
G ++ G ++A F +M Q +++S A+ VA Q D+ + + +
Sbjct: 320 GLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL 379
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
+ + N++IT Y + G + ++ +F+ M +RD VSW AIISGYAQ +AL +F E+K
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK 439
Query: 328 -RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
+ + ++ T L C+ AL +GK IH V+++ V AL+ MY KCG +
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYL 499
Query: 387 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
A F+ I KDVVSW +IAGY HG G AL ++ G++P+ + + VLS+C
Sbjct: 500 EAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSC 559
Query: 447 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 506
SH G++ +G + F SM +D+ V P+ +H C++DLL RA R+E+A + P
Sbjct: 560 SHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDV 619
Query: 507 WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRD 566
G +L A R +G TE+ + E + +++P ++G YV L + +AA RW D ++MR
Sbjct: 620 LGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRS 679
Query: 567 VGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREG 615
+G++K+ G+S +E+ K F + H D + L+ L +M + G
Sbjct: 680 LGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQFG 726
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 171/401 (42%), Gaps = 65/401 (16%)
Query: 5 HCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQR-------- 50
H A +F+ M +R VS+N MISGY S L +M P +
Sbjct: 194 HVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Query: 51 -------------------------DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVS 85
D+ ++T Y++ + + R+ +++P KDVV
Sbjct: 254 VSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVC 313
Query: 86 WNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL 145
W M+SG + G A++A VF +M + + +A+ V + + L S + L
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL 373
Query: 146 --------ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKN 197
+ N L+ + K L + +F++M+ RD+VSWN +ISGYAQ+ D+ +A
Sbjct: 374 RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALL 433
Query: 198 LFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEARTF----FDQMPQKNEISYNAMVAGY 248
LF++ + D FT +++ G L + + + A+V Y
Sbjct: 434 LFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMY 493
Query: 249 VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFD------MMPQRDCVS 302
+ ++ A+ F+++ ++V SW +I GYG +G A +++ M P V
Sbjct: 494 SKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH--VI 551
Query: 303 WAAIISGYAQTGHYEEALNMFIEIKRD-GESLNRSTFSCAL 342
+ A++S + G ++ L +F + RD G N +C +
Sbjct: 552 FLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVV 592
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 9/215 (4%)
Query: 307 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 366
I+ + G +++ L+ F + + + TF L CA + L G IH QV+ G+
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF 77
Query: 367 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 426
+ ++ ++L+ +Y K G + A VFE + E+DVV W MI Y+R G +A +
Sbjct: 78 SSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNE 137
Query: 427 MKTIGVKPDEITMVGVLSACSHAGLIDRGTEY--FYSMNKDYSVTPSSKHYTCMIDLLGR 484
M+ G+KP +T++ +LS + ++ Y + D +V S + C D +G
Sbjct: 138 MRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVG- 196
Query: 485 AGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 519
+A+DL M + SW ++ GN
Sbjct: 197 -----DAKDLFDQME-QRDMVSWNTMISGYASVGN 225
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/630 (28%), Positives = 304/630 (48%), Gaps = 63/630 (10%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR------------------ 50
A +VF+ M R+ V++ M+SGY + + + A +L+ +M
Sbjct: 59 AHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACG 118
Query: 51 ----------------------DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNA 88
D+V N ++ YV+N RL +A F + + SWN
Sbjct: 119 LVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNT 178
Query: 89 MLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW 148
++SGY + G DEA +F++MP N +SWN L++ +V G L + + ++
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDG 238
Query: 149 NCLMGGFVKRKMLGAARKLFDKMHVRDVVS--------WNTMISGYAQDGDMSQAKNLFD 200
L G +K G + ++H V S + +I Y+ G + A ++F
Sbjct: 239 FALPCG-LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 201 Q---SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI--SYNAMVAGYVQSNKMD 255
Q + + V W +M+SG++ N + A Q+ Q + SY A + N ++
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN 357
Query: 256 MARELFEAMPSRNVSSW-------NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 308
+ R + VS + + ++ + G+I A KLF +P +D ++++ +I
Sbjct: 358 L-RLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIR 416
Query: 309 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET 368
G ++G A +F E+ + G ++ S L C+ +A+L GKQIHG +K GYE+
Sbjct: 417 GCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYES 476
Query: 369 GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK 428
AL+ MY KCG I +F+G+ E+DVVSW +I G+ ++G ++A F M
Sbjct: 477 EPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMI 536
Query: 429 TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 488
IG++P+++T +G+LSAC H+GL++ +M +Y + P +HY C++DLLG+AG
Sbjct: 537 NIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLF 596
Query: 489 EEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLY 548
+EA +L+ MP EP W +LL A H N L AE + K P + +Y LSN Y
Sbjct: 597 QEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAY 656
Query: 549 AASGRWADAGNMRSRMRDVGVQKVTGYSWV 578
A G W +R + +G ++ +G SW+
Sbjct: 657 ATLGMWDQLSKVREAAKKLGAKE-SGMSWI 685
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/572 (22%), Positives = 244/572 (42%), Gaps = 91/572 (15%)
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSK 140
++V N ++S Y +A +VF +M +N ++W +++ Y +G+ +A L+
Sbjct: 38 QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM 97
Query: 141 SDWELISWNCLM-------GGFVKRKMLGA-ARKLFDKMHVR-DVVSWNTMISGYAQDGD 191
D E + N M G V LG + K ++R DVV N+++ Y ++G
Sbjct: 98 LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 192 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS 251
+ +A + F + +W ++SGY + G++DEA T F +MPQ N +S+N +++G+V
Sbjct: 158 LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK 217
Query: 252 NK----------------------------------MDMARELFEAMPSRNVSS----WN 273
+ M ++L + + S +
Sbjct: 218 GSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAIS 277
Query: 274 TMITGYGQNGDIAQARKLF---DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
+I Y G + A +F + W +++SG+ E AL + ++I +
Sbjct: 278 ALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSD 337
Query: 331 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 390
+ T S AL C + L LG Q+H VV +GYE VG+ L+ ++ G+I +A+
Sbjct: 338 LCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAH 397
Query: 391 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 450
+F + KD+++++ +I G + GF A +F + +G+ D+ + +L CS
Sbjct: 398 KLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLA 457
Query: 451 LIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDL---------------------------- 481
+ G + + + K Y P + T ++D+
Sbjct: 458 SLGWGKQIHGLCIKKGYESEPVTA--TALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGI 515
Query: 482 ---LGRAGRLEEAQDL---MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV---FK 532
G+ GR+EEA M N+ EP ++ LL A R G E E + +
Sbjct: 516 IVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYG 575
Query: 533 MEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 564
+EP+ Y ++ +L +G + +A + ++M
Sbjct: 576 LEPYLEHYYCVV-DLLGQAGLFQEANELINKM 606
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 164/406 (40%), Gaps = 89/406 (21%)
Query: 190 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV 249
G+ QA ++ Q Q+VF ++S YV +L +A FD+M ++N +++ MV+GY
Sbjct: 24 GESIQA-HVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT 82
Query: 250 QSNKMDMARELFEAMPSR----------------------------------------NV 269
K + A EL+ M +V
Sbjct: 83 SDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDV 142
Query: 270 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF------ 323
N+++ Y +NG + +A F + + SW +ISGY + G +EA+ +F
Sbjct: 143 VLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQP 202
Query: 324 ------------------------IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHG 359
+ ++R+G L+ C L C+ L +GKQ+H
Sbjct: 203 NVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHC 262
Query: 360 QVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-----DVVSWNTMIAGYARH 414
VVK+G E+ F +AL+ MY CGS+ A DVF +EK V WN+M++G+ +
Sbjct: 263 CVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH--QEKLAVNSSVAVWNSMLSGFLIN 320
Query: 415 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSH-----AGLIDRGTEYFYSMNKDYSVT 469
+ AL + + + D T+ G L C + GL DY V
Sbjct: 321 EENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVG 380
Query: 470 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASR 515
+ ++DL G +++A L +P + A G + G +
Sbjct: 381 ------SILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK 420
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 168/412 (40%), Gaps = 94/412 (22%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
++NG A F + R SS S+N +ISGY + A LF +MPQ ++VSWN +++
Sbjct: 153 VKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLIS 212
Query: 61 GY------------VRNRRLGDARRLFDSMP---------------------------QK 81
G+ VR +R G F ++P +
Sbjct: 213 GFVDKGSPRALEFLVRMQREGLVLDGF-ALPCGLKACSFGGLLTMGKQLHCCVVKSGLES 271
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQ---MPHKNAISWNGLLAAYVHNGRIEEACRLFD 138
+ +A++ Y+ G A +VF+Q + + WN +L+ ++ N E A L
Sbjct: 272 SPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLL 331
Query: 139 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS--------WNTMISGYAQDG 190
+L + + G +K + +L ++H VVS + ++ +A G
Sbjct: 332 QIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVG 391
Query: 191 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF----------DQMPQKN--- 237
++ A LF + P++D+ ++ ++ G V++G A F DQ N
Sbjct: 392 NIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILK 451
Query: 238 --------------------------EISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS 271
++ A+V YV+ ++D LF+ M R+V S
Sbjct: 452 VCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVS 511
Query: 272 WNTMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAIISGYAQTGHYEEA 319
W +I G+GQNG + +A + F M + + V++ ++S +G EEA
Sbjct: 512 WTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEA 563
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 36/233 (15%)
Query: 333 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 392
++ + L C + A + G+ I V+K G F+ N ++ MY + +A+ V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGL 451
F+ + E+++V+W TM++GY G +A+ ++ M + +E VL AC G
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 452 IDRGTEYFYSMNKD------------------------------YSVTPSSKHYTCMIDL 481
I G + + K+ + PSS + +I
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 482 LGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 534
+AG ++EA L MP +P SW L+ G+ +A E + +M+
Sbjct: 183 YCKAGLMDEAVTLFHRMP-QPNVVSWNCLISGFVDKGSP----RALEFLVRMQ 230
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/612 (29%), Positives = 298/612 (48%), Gaps = 68/612 (11%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNR 66
D +RVF ++ + + VSY A+I G R + A +F M ++ + +V L+ +
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS-- 248
Query: 67 RLGDARRLFDSMPQ--------------------KDVVSWNAMLSGYAQNGYADEAREVF 106
+ R DS+ + D+ N++L YA+N + A +F
Sbjct: 249 -ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307
Query: 107 YQMPHKNAISWNGLLAAYVHNGR----IEEACRLFDSKSDWELISWNCLMGGFVKRKMLG 162
+MP N +SWN ++ + R +E R+ DS ++ ++G + +
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVE 367
Query: 163 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYV 218
R++F + V +WN M+SGY+ +A + F Q Q D T + ++S
Sbjct: 368 TGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCA 427
Query: 219 QNGMLDEARTFFDQMPQKNEISYNA-----MVAGYVQSNKMDMARELFE-AMPSRNVSSW 272
+ L+ + + + EIS N+ ++A Y + KM+++ +F+ + +++ W
Sbjct: 428 RLRFLEGGKQIHGVVI-RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACW 486
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
N+MI+G+ N +A LF M Q A++
Sbjct: 487 NSMISGFRHNMLDTKALILFRRMHQ------TAVLCP----------------------- 517
Query: 333 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 392
N ++F+ LS+C+ + +L G+Q HG VVK+GY + FV AL MY KCG I A
Sbjct: 518 -NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQF 576
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI 452
F+ + K+ V WN MI GY +G G +A+ ++ M + G KPD IT V VL+ACSH+GL+
Sbjct: 577 FDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLV 636
Query: 453 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
+ G E SM + + + P HY C++D LGRAGRLE+A+ L P++ + W LL
Sbjct: 637 ETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696
Query: 513 ASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 572
+ R+HG+ L + AE + +++P +S YVLLSN Y++ +W D+ ++ M V K
Sbjct: 697 SCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKT 756
Query: 573 TGYSWVEVQNKI 584
G SW N +
Sbjct: 757 PGQSWTTYGNDL 768
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 143/603 (23%), Positives = 262/603 (43%), Gaps = 130/603 (21%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
N ++ Y+ AR +FD+M RD+ SWN LT + LG+A +FD MP++DVV
Sbjct: 45 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 104
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMP---------------------------------- 110
SWN M+S + G+ ++A V+ +M
Sbjct: 105 SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA 164
Query: 111 -----HKNAISWNGLLAAYVHNGRIEE-ACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 164
KN N LL+ Y G I + R+F+S S +S+ ++GG + + A
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Query: 165 RKLF----------DKMHVRDVVSW----------------------------------- 179
++F D + + +++S
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDL 284
Query: 180 ---NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP-- 234
N+++ YA++ DM+ A+ +F + P +V +W M+ G+ Q D++ F +M
Sbjct: 285 HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDS 344
Query: 235 --QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF 292
Q NE++ +++ +S ++ R +F ++P +VS+WN M
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAM----------------- 387
Query: 293 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALE 352
+SGY+ HYEEA++ F +++ +++T S LS+CA + LE
Sbjct: 388 --------------LSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLE 433
Query: 353 LGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG-IEEKDVVSWNTMIAGY 411
GKQIHG V++T + + L+ +Y +C + + +F+ I E D+ WN+MI+G+
Sbjct: 434 GGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGF 493
Query: 412 ARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 470
+ +AL++F M +T + P+E + VLS+CS + G ++ + K V+
Sbjct: 494 RHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSD 553
Query: 471 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 530
S T + D+ + G ++ A+ + W ++ +G+ G++A +
Sbjct: 554 SFVE-TALTDMYCKCGEIDSARQFF-DAVLRKNTVIWNEMIHG---YGHNGRGDEAVGLY 608
Query: 531 FKM 533
KM
Sbjct: 609 RKM 611
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/498 (19%), Positives = 197/498 (39%), Gaps = 103/498 (20%)
Query: 80 QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS 139
+ D N +L Y + G D AR+VF +M ++ SWN L G + EAC +FD
Sbjct: 38 KSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDG 97
Query: 140 KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 199
+ +++SWN ++ V++ A ++ +M V + S + +S +
Sbjct: 98 MPERDVVSWNNMISVLVRKGFEEKALVVYKRM-----VCDGFLPSRFTLASVLSACSKVL 152
Query: 200 D-------------QSPHQDVFTWTAMVSGYVQNG-MLDEARTFFDQMPQKNEISYNAMV 245
D +++F A++S Y + G ++D F+ + Q NE+SY A++
Sbjct: 153 DGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI 212
Query: 246 AGYVQSNKMDMARELFEAMPSRNVSS---------------------------------- 271
G + NK+ A ++F M + V
Sbjct: 213 GGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIH 272
Query: 272 --------------WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 317
N+++ Y +N D+ A +F MP+ + VSW +I G+ Q +
Sbjct: 273 CLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 332
Query: 318 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 377
+++ ++ G N TC + L
Sbjct: 333 KSVEFLTRMRDSGFQPNE-------VTCISV----------------------------L 357
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
G F+ G + +F I + V +WN M++GY+ + ++A+ F M+ +KPD+
Sbjct: 358 GACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKT 417
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
T+ +LS+C+ ++ G + + + ++ +S + +I + ++E ++ + +
Sbjct: 418 TLSVILSSCARLRFLEGGKQ-IHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDD 476
Query: 498 MPFEPPAASWGALLGASR 515
E A W +++ R
Sbjct: 477 CINELDIACWNSMISGFR 494
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 163/382 (42%), Gaps = 66/382 (17%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNV 57
+N + A +F MP + VS+N MI G+ + R + + +M Q + V+
Sbjct: 296 KNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCIS 355
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------PH 111
+L R+ + RR+F S+PQ V +WNAMLSGY+ + +EA F QM P
Sbjct: 356 VLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPD 415
Query: 112 KNAIS---------------------------------WNGLLAAYVHNGRIE-EACRLF 137
K +S +GL+A Y ++E C
Sbjct: 416 KTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFD 475
Query: 138 DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV-----SWNTMISGYAQDGDM 192
D ++ ++ WN ++ GF + A LF +MH V+ S+ T++S ++ +
Sbjct: 476 DCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSL 535
Query: 193 ---SQAKNLFDQSPH-QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGY 248
Q L +S + D F TA+ Y + G +D AR FFD + +KN + +N M+ GY
Sbjct: 536 LHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGY 595
Query: 249 VQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMM-------PQ 297
+ + D A L+ M S ++ +++T +G + ++ M P+
Sbjct: 596 GHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPE 655
Query: 298 RDCVSWAAIISGYAQTGHYEEA 319
D + I+ + G E+A
Sbjct: 656 LD--HYICIVDCLGRAGRLEDA 675
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 72/212 (33%)
Query: 354 GKQIHGQVVKTGYETGCFVGNALLGMYFKC------------------------------ 383
GK IHG +V+ G ++ ++ N LL +Y +C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 384 -GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 442
G +GEA +VF+G+ E+DVVSWN MI+ R GF ++AL+V++ M G P T+ V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 443 LSACS----------------HAGL--------------------IDRGTEYFYSMNKDY 466
LSACS GL +D G F S+++
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ-- 202
Query: 467 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
P+ YT +I L R ++ EA + R M
Sbjct: 203 ---PNEVSYTAVIGGLARENKVLEAVQMFRLM 231
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 289/553 (52%), Gaps = 39/553 (7%)
Query: 80 QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS 139
++DV +NA++SG+ NG +A E + +M NG+L D
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREM------RANGILP---------------DK 161
Query: 140 KSDWELISWNCLMGGFVKRKMLGAARKL-FDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 198
+ L+ + M +K+ G A KL FD D + +++ Y++ + A+ +
Sbjct: 162 YTFPSLLKGSDAMELSDVKKVHGLAFKLGFDS----DCYVGSGLVTSYSKFMSVEDAQKV 217
Query: 199 FDQSPHQD-VFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNK 253
FD+ P +D W A+V+GY Q ++A F +M ++ + + ++++ + S
Sbjct: 218 FDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGD 277
Query: 254 MDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG 309
+D R + + ++ N +I YG++ + +A +F+ M +RD +W +++
Sbjct: 278 IDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCV 337
Query: 310 YAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY--- 366
+ G ++ L +F + G + T + L TC +A+L G++IHG ++ +G
Sbjct: 338 HDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNR 397
Query: 367 -ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 425
+ F+ N+L+ MY KCG + +A VF+ + KD SWN MI GY G+ AL +F
Sbjct: 398 KSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFS 457
Query: 426 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 485
M GVKPDEIT VG+L ACSH+G ++ G + M Y++ P+S HY C+ID+LGRA
Sbjct: 458 CMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRA 517
Query: 486 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLS 545
+LEEA +L + P W ++L + R+HGN +L A + + ++EP + G YVL+S
Sbjct: 518 DKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMS 577
Query: 546 NLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLE 605
N+Y +G++ + ++R MR V+K G SW+ ++N +H F G+ HPE I+ +L
Sbjct: 578 NVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLS 637
Query: 606 ELDLKMRREGYVS 618
+ M Y++
Sbjct: 638 LVISHMHGHEYMT 650
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 164/383 (42%), Gaps = 69/383 (18%)
Query: 7 DSALRVFNTMPRRS-SVSYNAMISGYLRNARFSLARDLFDKMPQRDL-VSWNVM---LTG 61
+ A +VF+ +P R SV +NA+++GY + RF A +F KM + + VS + + L+
Sbjct: 212 EDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSA 271
Query: 62 YVRNRRLGDARRL----FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW 117
+ + + + R + + D+V NA++ Y ++ + +EA +F M ++ +W
Sbjct: 272 FTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTW 331
Query: 118 NGLLAAYVHNGRIEEACRLFD--------------------------------------- 138
N +L + + G + LF+
Sbjct: 332 NSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIV 391
Query: 139 -----SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 193
KS E I N LM +VK L AR +FD M V+D SWN MI+GY
Sbjct: 392 SGLLNRKSSNEFIH-NSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGE 450
Query: 194 QAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI-----SYNAM 244
A ++F D T+ ++ +G L+E R F QM I Y +
Sbjct: 451 LALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACV 510
Query: 245 VAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGD----IAQARKLFDMMPQRD 299
+ +++K++ A EL + P N W ++++ +G+ + ++L ++ P+
Sbjct: 511 IDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEH- 569
Query: 300 CVSWAAIISGYAQTGHYEEALNM 322
C + + + Y + G YEE L++
Sbjct: 570 CGGYVLMSNVYVEAGKYEEVLDV 592
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 139/295 (47%), Gaps = 25/295 (8%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQK-DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA-- 114
++T Y + + DA+++FD +P + D V WNA+++GY+Q ++A VF +M +
Sbjct: 201 LVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGV 260
Query: 115 --ISWNGLLAAYVHNGRIEEACRL----FDSKSDWELISWNCLMGGFVKRKMLGAARKLF 168
+ +L+A+ +G I+ + + S +++ N L+ + K K L A +F
Sbjct: 261 SRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIF 320
Query: 169 DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLD 224
+ M RD+ +WN+++ + GD LF++ D+ T T ++ + L
Sbjct: 321 EAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLR 380
Query: 225 EARTFFDQM--------PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMI 276
+ R M NE +N+++ YV+ + AR +F++M ++ +SWN MI
Sbjct: 381 QGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMI 440
Query: 277 TGYGQNGDIAQARKLFDMM----PQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
GYG A +F M + D +++ ++ + +G E N +++
Sbjct: 441 NGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQME 495
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 13/220 (5%)
Query: 303 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 362
+AAI A Y E + E N +T L CA G+QIHG +V
Sbjct: 28 FAAIKPSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMV 87
Query: 363 KTGY-ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 421
+ G+ + G +L+ MY KCG + A VF G E+DV +N +I+G+ +G A+
Sbjct: 88 RKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAM 146
Query: 422 MVFESMKTIGVKPDEITMVGVLSACSHAGLID----RGTEYFYSMNKDYSVTPSSKHYTC 477
+ M+ G+ PD+ T +L L D G + + D V
Sbjct: 147 ETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSG------ 200
Query: 478 MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL-GASRI 516
++ + +E+AQ + +P + W AL+ G S+I
Sbjct: 201 LVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 34/246 (13%)
Query: 12 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 71
V T R +S+ I GY+ + L ++ + + N ++ YV+ L DA
Sbjct: 369 VLPTCGRLASLRQGREIHGYM------IVSGLLNRKSSNEFIH-NSLMDMYVKCGDLRDA 421
Query: 72 RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHN 127
R +FDSM KD SWN M++GY + A ++F M + I++ GLL A H+
Sbjct: 422 RMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHS 481
Query: 128 GRIEEACR-LFDSKSDWELIS----WNCLMGGFVKRKMLGAARKL-------FDKMHVRD 175
G + E L ++ + ++ + C++ MLG A KL K +
Sbjct: 482 GFLNEGRNFLAQMETVYNILPTSDHYACVI------DMLGRADKLEEAYELAISKPICDN 535
Query: 176 VVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFD 231
V W +++S G+ A K L + P + + M + YV+ G +E D
Sbjct: 536 PVVWRSILSSCRLHGNKDLALVAGKRLHELEP-EHCGGYVLMSNVYVEAGKYEEVLDVRD 594
Query: 232 QMPQKN 237
M Q+N
Sbjct: 595 AMRQQN 600
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 279 bits (714), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 186/647 (28%), Positives = 318/647 (49%), Gaps = 96/647 (14%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGD---ARRLFDSMPQK 81
N ++S Y R + + FD++ + D+ SW +L+ + +LGD A +FD MP++
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSA---SFKLGDIEYAFEVFDKMPER 152
Query: 82 -DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS------------------------ 116
DV WNAM++G ++GY + + E+F +M HK +
Sbjct: 153 DDVAIWNAMITGCKESGYHETSVELFREM-HKLGVRHDKFGFATILSMCDYGSLDFGKQV 211
Query: 117 ---------------WNGLLAAYVHNGRIEEACRLFDSKSDWEL---ISWNCLMGG---- 154
N L+ Y + + +AC +F+ ++D + +++N ++ G
Sbjct: 212 HSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFE-ETDVAVRDQVTFNVVIDGLAGF 270
Query: 155 ------FVKRKMLGAARKLFDKMHV-------------------------RDVVSWNTMI 183
V RKML A+ + D V + + N +
Sbjct: 271 KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATM 330
Query: 184 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEI 239
+ Y+ D A +F+ +D+ TW M+S Y Q + A + + +M + +E
Sbjct: 331 TMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEF 390
Query: 240 SYNAMVAGYVQSNKMDMARE-LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR 298
++ +++A + + ++M + + + S + N +I+ Y +NG I +A LF+ ++
Sbjct: 391 TFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRK 450
Query: 299 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL--NRSTFSCALSTCADIAALELGKQ 356
+ +SW AIISG+ G E L F + + + T S LS C ++L LG Q
Sbjct: 451 NLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQ 510
Query: 357 IHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGF 416
H V++ G +GNAL+ MY +CG+I + +VF + EKDVVSWN++I+ Y+RHG
Sbjct: 511 THAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGE 570
Query: 417 GKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 475
G+ A+ +++M+ G V PD T VLSACSHAGL++ G E F SM + + V + H+
Sbjct: 571 GENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHF 630
Query: 476 TCMIDLLGRAGRLEEAQDLMR--NMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 533
+C++DLLGRAG L+EA+ L++ W AL A HG+ +LG+ A+++ +
Sbjct: 631 SCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEK 690
Query: 534 EPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEV 580
E + +YV LSN+YA +G W +A R + +G K G SW+ +
Sbjct: 691 EKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 307 ISGYAQTGHYEEALNMFIEIKR-DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 365
++G ++G AL +F ++ R ++ + S A++T + G Q+H +++G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 366 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 425
V N LL +Y + G++ F+ I+E DV SW T+++ + G + A VF+
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 426 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 464
M + D +++ C +G + E F M+K
Sbjct: 148 KMPE---RDDVAIWNAMITGCKESGYHETSVELFREMHK 183
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/541 (29%), Positives = 273/541 (50%), Gaps = 19/541 (3%)
Query: 89 MLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS--------- 139
+++ + G AR+VF ++P + +N ++ Y +E RL+D
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 140 KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 199
S + + CL G V K K D + DV +++++ Y + G M +A+ LF
Sbjct: 116 SSTFTMTIKACL-SGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 200 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSN----KMD 255
+ +DV WT MV+G+ Q G +A F+ +M + ++ G +Q++
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTK 234
Query: 256 MARE----LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYA 311
M R L+ NV +++ Y + G I A ++F M + VSW ++ISG+A
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 312 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 371
Q G +A +E++ G + T L C+ + +L+ G+ +H ++K +
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR-HVLDRV 353
Query: 372 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 431
AL+ MY KCG++ + ++FE + KD+V WNTMI+ Y HG G++ + +F M
Sbjct: 354 TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESN 413
Query: 432 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 491
++PD T +LSA SH+GL+++G +F M Y + PS KHY C+IDLL RAGR+EEA
Sbjct: 414 IEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEA 473
Query: 492 QDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 551
D++ + + W ALL H N +G+ AA + ++ P + G+ L+SN +A +
Sbjct: 474 LDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATA 533
Query: 552 GRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKM 611
+W + +R MR+ ++KV GYS +EV ++ F + D H E + L L ++
Sbjct: 534 NKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEI 593
Query: 612 R 612
R
Sbjct: 594 R 594
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 166/380 (43%), Gaps = 58/380 (15%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP------------- 48
R G A +VF+ +P+R YN+MI Y R L+D+M
Sbjct: 62 RIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTM 121
Query: 49 --------------------------QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD 82
+ D+ + +L Y++ ++ +A LF M ++D
Sbjct: 122 TIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRD 181
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACR--- 135
V+ W M++G+AQ G + +A E + +M + ++ + GLL A G +
Sbjct: 182 VICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHG 241
Query: 136 -LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQ 194
L+ + ++ L+ + K + A ++F +M + VSW ++ISG+AQ+G ++
Sbjct: 242 YLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANK 301
Query: 195 AKNLFDQSP----HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK---NEISYNAMVAG 247
A + D+ T ++ Q G L R + ++ + ++ A++
Sbjct: 302 AFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDM 361
Query: 248 YVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSW 303
Y + + +RE+FE + +++ WNTMI+ YG +G+ + LF M + D ++
Sbjct: 362 YSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATF 421
Query: 304 AAIISGYAQTGHYEEALNMF 323
A+++S + +G E+ + F
Sbjct: 422 ASLLSALSHSGLVEQGQHWF 441
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 168/391 (42%), Gaps = 55/391 (14%)
Query: 20 SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP 79
SS+S + +I+ R S AR +FD++PQR + +N M+ Y R + + RL+D M
Sbjct: 50 SSISRD-LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMI 108
Query: 80 ---------------------------------------QKDVVSWNAMLSGYAQNGYAD 100
+ DV +++L+ Y + G D
Sbjct: 109 AEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMD 168
Query: 101 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKM 160
EA +F +M ++ I W ++ + G+ +A + + +M G ++
Sbjct: 169 EAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASG 228
Query: 161 LGAARKLFDKMH--------VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 212
K+ +H +VV +++ YA+ G + A +F + + +W +
Sbjct: 229 DLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGS 288
Query: 213 MVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN 268
++SG+ QNG+ ++A +M Q + ++ ++ Q + R + + R+
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 269 V---SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 325
V + ++ Y + G ++ +R++F+ + ++D V W +IS Y G+ +E +++F++
Sbjct: 349 VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQ 356
+ + +TF+ LS + +E G+
Sbjct: 409 MTESNIEPDHATFASLLSALSHSGLVEQGQH 439
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 17/214 (7%)
Query: 356 QIHGQVVKTG-YETGCFVGNALLGMYFKCGSIGE---ANDVFEGIEEKDVVSWNTMIAGY 411
QIH V+ TG G + L+ CG IGE A VF+ + ++ V +N+MI Y
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIA---SCGRIGEISYARKVFDELPQRGVSVYNSMIVVY 91
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
+R + L +++ M ++PD T + AC ++++G E + D+
Sbjct: 92 SRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKG-EAVWCKAVDFGYKND 150
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 531
+ +++L + G+++EA+ L M A + + + G + G+ + F
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKM------AKRDVICWTTMVTGFAQAGKSLKAVEF 204
Query: 532 KMEPHNSGM---YVLLSNLYAASGRWADAGNMRS 562
E N G V++ L ASG D RS
Sbjct: 205 YREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRS 238
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 260/499 (52%), Gaps = 31/499 (6%)
Query: 89 MLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW 148
+++ Y + G +AR+VF +MP ++ ++ A NG +E+ F E+
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFR-----EMYKD 111
Query: 149 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 208
+ F+ +L A+R L D+ + G M L S D F
Sbjct: 112 GLKLDAFIVPSLLKASRNLLDR-----------------EFGKMIHCLVL-KFSYESDAF 153
Query: 209 TWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP--- 265
++++ Y + G + AR F + +++ + +NAM++GY +++ D A L + M
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 266 -SRNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEAL 320
+V +WN +I+G+ + + ++ ++M + D VSW +IISG E+A
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 321 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 380
+ F ++ G N +T L C +A ++ GK+IHG V TG E FV +ALL MY
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 381 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 440
KCG I EA +F +K V++N+MI YA HG +A+ +F+ M+ G K D +T
Sbjct: 334 GKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFT 393
Query: 441 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF 500
+L+ACSHAGL D G F M Y + P +HY CM+DLLGRAG+L EA ++++ M
Sbjct: 394 AILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRM 453
Query: 501 EPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNM 560
EP WGALL A R HGN EL AA+ + ++EP NSG +LL++LYA +G W M
Sbjct: 454 EPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRM 513
Query: 561 RSRMRDVGVQKVTGYSWVE 579
+ ++ ++ G SWVE
Sbjct: 514 KKMIKKKRFRRFLGSSWVE 532
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 195/423 (46%), Gaps = 73/423 (17%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW 117
++T YV ++ DAR++FD MP++D+ M+ A+NGY E+ + F +M +K+ +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREM-YKDGLKL 115
Query: 118 NGLLAAYVHN----------GRIEEACRL-FDSKSDWELISWNCLMGGFVKRKMLGAARK 166
+ + + G++ L F +SD ++S L+ + K +G ARK
Sbjct: 116 DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVS--SLIDMYSKFGEVGNARK 173
Query: 167 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP----HQDVFTWTAMVSGYVQNGM 222
+F + +D+V +N MISGYA + +A NL DV TW A++SG+
Sbjct: 174 VFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN 233
Query: 223 LDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNT 274
++ + M + + +S+ ++++G V + + + A + F+ M + N ++ T
Sbjct: 234 EEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIIT 293
Query: 275 M---------------------ITG--------------YGQNGDIAQARKLFDMMPQRD 299
+ +TG YG+ G I++A LF P++
Sbjct: 294 LLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKT 353
Query: 300 CVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI-- 357
V++ ++I YA G ++A+ +F +++ GE L+ TF+ L+ C+ +LG+ +
Sbjct: 354 TVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFL 413
Query: 358 ----HGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYA 412
++V C V LLG + G + EA ++ + + E D+ W ++A
Sbjct: 414 LMQNKYRIVPRLEHYACMVD--LLG---RAGKLVEAYEMIKAMRMEPDLFVWGALLAACR 468
Query: 413 RHG 415
HG
Sbjct: 469 NHG 471
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 354 GKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYAR 413
G+ +H +V +G + L+ Y +CG + +A VF+ + ++D+ MI AR
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 414 HGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG-TEYFYSMNKDYSVTPSS 472
+G+ +++L F M G+K D + +L A + L+DR + + + +S +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRN--LLDREFGKMIHCLVLKFSYESDA 152
Query: 473 KHYTCMIDLLGRAGRLEEAQDLMRNM 498
+ +ID+ + G + A+ + ++
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDL 178
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 179/645 (27%), Positives = 330/645 (51%), Gaps = 32/645 (4%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF----DKMPQRDLVSWNV 57
+ G+ A +VF+ MP R V+++ ++S L N A +F D + D V+
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMIS 207
Query: 58 MLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKN 113
++ G L AR + + +K D N++L+ Y++ G + +F ++ KN
Sbjct: 208 VVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 114 AISWNGLLAAYVHNGRIEEACRLFDS--KSDWE--LISW-----NCLMGGFVK--RKMLG 162
A+SW ++++Y E+A R F KS E L++ +C + G ++ + + G
Sbjct: 268 AVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHG 327
Query: 163 -AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 221
A R+ D + ++ ++ YA+ G +S + + +++ W +++S Y G
Sbjct: 328 FAVRRELDPNYESLSLA---LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 222 MLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS---WNT 274
M+ +A F QM + + + + ++ + + + +++ + +VS N+
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNS 444
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
+I Y ++G + A +F+ + R V+W +++ G++Q G+ EA+++F + +N
Sbjct: 445 LIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMN 504
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
TF + C+ I +LE GK +H +++ +G + F AL+ MY KCG + A VF
Sbjct: 505 EVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFR 563
Query: 395 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR 454
+ + +VSW++MI Y HG A+ F M G KP+E+ + VLSAC H+G ++
Sbjct: 564 AMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEE 623
Query: 455 GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGAS 514
G +Y++++ K + V+P+S+H+ C IDLL R+G L+EA ++ MPF A+ WG+L+
Sbjct: 624 G-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGC 682
Query: 515 RIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTG 574
RIH ++ + + + ++G Y LLSN+YA G W + +RS M+ ++KV G
Sbjct: 683 RIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPG 742
Query: 575 YSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSS 619
YS +E+ K+ +F G+ + D IY FL L E V S
Sbjct: 743 YSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEEHVVDS 787
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 257/534 (48%), Gaps = 55/534 (10%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G DS+ VF P S Y +I + A DL+ + LVS ++ +V
Sbjct: 48 GSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHR-----LVSETTQISKFV 102
Query: 64 RN---RRLGDAR-----------RLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM 109
R +R R+ D V ++L Y Q G +A +VF M
Sbjct: 103 FPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM 162
Query: 110 PHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLGAAR 165
P ++ ++W+ L+++ + NG + +A R+F D + + ++ ++ G + L AR
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 222
Query: 166 ----KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 221
++ KM D N++++ Y++ GD+ ++ +F++ ++ +WTAM+S Y +
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 282
Query: 222 MLDEARTFFDQM----PQKNEISYNAMVA-----GYVQSNK----MDMARELFEAMPSRN 268
++A F +M + N ++ ++++ G ++ K + REL S +
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 342
Query: 269 VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 328
++ ++ Y + G ++ + ++ R+ V+W ++IS YA G +AL +F ++
Sbjct: 343 LA----LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT 398
Query: 329 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 388
+ T + ++S C + + LGKQIHG V++T FV N+L+ MY K GS+
Sbjct: 399 QRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDS 457
Query: 389 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH 448
A+ VF I+ + VV+WN+M+ G++++G +A+ +F+ M ++ +E+T + V+ ACS
Sbjct: 458 ASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSS 517
Query: 449 AGLIDRGT----EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
G +++G + S KD T +ID+ + G L A+ + R M
Sbjct: 518 IGSLEKGKWVHHKLIISGLKDLFTD------TALIDMYAKCGDLNAAETVFRAM 565
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 178/354 (50%), Gaps = 24/354 (6%)
Query: 174 RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 233
RD + +I YA G ++ +F+ P+ D F + ++ V +LD A + ++
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 234 PQKNEISYNAMVAGYVQSNKMDM---ARE-----------LFEAMPSRNVSSWNTMITGY 279
+S ++ +V + + +RE + + + +++ Y
Sbjct: 92 -----VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 280 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 339
GQ G+++ A K+FD MP RD V+W+ ++S + G +AL MF + DG + T
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMI 206
Query: 340 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 399
+ CA++ L + + +HGQ+ + ++ + N+LL MY KCG + + +FE I +K
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK 266
Query: 400 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG-TEY 458
+ VSW MI+ Y R F ++AL F M G++P+ +T+ VLS+C GLI G + +
Sbjct: 267 NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 459 FYSMNKDYSVTPSSKHYT-CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
+++ ++ + P+ + + +++L G+L + + ++R + + +W +L+
Sbjct: 327 GFAVRRE--LDPNYESLSLALVELYAECGKLSDCETVLRVVS-DRNIVAWNSLI 377
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 136/281 (48%), Gaps = 17/281 (6%)
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
+I Y G +R +F+ P D + +I + A++++ + + ++
Sbjct: 40 LIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQIS 99
Query: 335 RSTFSCALSTCA-DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
+ F L CA L +G ++HG+++K G + + +LL MY + G++ +A VF
Sbjct: 100 KFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVF 159
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 453
+G+ +D+V+W+T+++ +G +AL +F+ M GV+PD +TM+ V+ C+ G +
Sbjct: 160 DGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLR 219
Query: 454 RGTEYFYSMNK---DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 510
+ + D T + ++ + + G L ++ + + + A SW A+
Sbjct: 220 IARSVHGQITRKMFDLDETLCNS----LLTMYSKCGDLLSSERIFEKIA-KKNAVSWTAM 274
Query: 511 LGASRIHGNTELGEKA----AEMVFK-MEPHNSGMYVLLSN 546
+ + + E EKA +EM+ +EP+ +Y +LS+
Sbjct: 275 ISS---YNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 275/549 (50%), Gaps = 67/549 (12%)
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
D V N+++S YA+ R+VF +M H++ +S+ ++ + +G + EA +L
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 201
+ GF+ + L V +++ T + ++ M A L D+
Sbjct: 141 FY----------GFIPKSEL-----------VASLLALCTRMGSSSKVARMFHALVLVDE 179
Query: 202 SPHQDVFTWTAMVSGYVQNGMLDEARTF--FDQMPQKNEISYNAMVAGYVQSNKMDMARE 259
+ V TA+V Y++ D A F FDQM KNE+S+ AM++G V + +M +
Sbjct: 180 RMQESVLLSTALVDMYLKFD--DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVD 237
Query: 260 LFEAMPSRNV--------------------SSWNTMITG--------------------Y 279
LF AM N+ SS I G Y
Sbjct: 238 LFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMY 297
Query: 280 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 339
+ G+++ +R LF+ RD V W+++ISGYA+TG E +N+ +++++G N T
Sbjct: 298 CRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLL 357
Query: 340 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 399
+S C + L +H Q++K G+ + +GNAL+ MY KCGS+ A +VF + EK
Sbjct: 358 AIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Query: 400 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF 459
D+VSW++MI Y HG G +AL +F+ M G + D++ + +LSAC+HAGL++ F
Sbjct: 418 DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF 477
Query: 460 YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 519
K Y + + +HY C I+LLGR G++++A ++ NMP +P A W +LL A HG
Sbjct: 478 TQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGR 536
Query: 520 TEL-GEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWV 578
++ G+ A + K EP N YVLLS ++ SG + A +R M+ + K G+S +
Sbjct: 537 LDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKI 596
Query: 579 EVQNKIHKF 587
E + +I +
Sbjct: 597 EPELQIEDY 605
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 151/334 (45%), Gaps = 35/334 (10%)
Query: 35 ARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 94
AR A L D+ Q ++ ++ Y++ A +FD M K+ VSW AM+SG
Sbjct: 168 ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCV 227
Query: 95 QNGYADEAREVFYQMPHKN----------------AISWNGLLAAYVHNGRIEEACRLFD 138
N + ++F M +N +++ L +H C D
Sbjct: 228 ANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHA-D 286
Query: 139 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 198
+ ++ C G + +R LF+ VRDVV W++MISGYA+ GD S+ NL
Sbjct: 287 ERLTAAFMTMYCRCGN------VSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNL 340
Query: 199 FDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY----NAMVAGYVQ 250
+Q + + T A+VS + +L A T Q+ + +S+ NA++ Y +
Sbjct: 341 LNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAK 400
Query: 251 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAI 306
+ ARE+F + +++ SW++MI YG +G ++A ++F M + D +++ AI
Sbjct: 401 CGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAI 460
Query: 307 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 340
+S G EEA +F + + + ++C
Sbjct: 461 LSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYAC 494
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 153/343 (44%), Gaps = 59/343 (17%)
Query: 8 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVML-------- 59
+A VF+ M ++ VS+ AMISG + N + + DLF M + +L V L
Sbjct: 203 AAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACV 262
Query: 60 --------------------------------TGYVRNRRLGDARRLFDSMPQKDVVSWN 87
T Y R + +R LF++ +DVV W+
Sbjct: 263 ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWS 322
Query: 88 AMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW 143
+M+SGYA+ G E + QM + N+++ +++A ++ + A +
Sbjct: 323 SMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC 382
Query: 144 ELISW----NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 199
+S N L+ + K L AAR++F ++ +D+VSW++MI+ Y G S+A +F
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIF 442
Query: 200 D---QSPHQ-DVFTWTAMVSGYVQNGMLDEARTFFDQ-----MPQKNEISYNAMVAGYVQ 250
+ H+ D + A++S G+++EA+T F Q MP E Y + +
Sbjct: 443 KGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLE-HYACYINLLGR 501
Query: 251 SNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARKLF 292
K+D A E+ MP + + W+++++ +G + A K+
Sbjct: 502 FGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKII 544
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 3 NGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSW--- 55
G C + + N M + +SV+ A++S + S A + ++ + +S
Sbjct: 331 TGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILL 390
Query: 56 -NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP---- 110
N ++ Y + L AR +F + +KD+VSW++M++ Y +G+ EA E+F M
Sbjct: 391 GNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGH 450
Query: 111 HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL 145
+ +++ +L+A H G +EEA +F + +
Sbjct: 451 EVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHM 485
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 129/322 (40%), Gaps = 77/322 (23%)
Query: 26 AMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK---- 81
A ++ Y R SL+R LF+ RD+V W+ M++GY + L + M ++
Sbjct: 292 AFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEA 351
Query: 82 -----------------------------------DVVSWNAMLSGYAQNGYADEAREVF 106
++ NA++ YA+ G AREVF
Sbjct: 352 NSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVF 411
Query: 107 YQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARK 166
Y++ K+ +SW+ ++ AY +G EA +F + GG
Sbjct: 412 YELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM----------IKGG------------ 449
Query: 167 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYV----QNGM 222
H D +++ ++S G + +A+ +F Q+ + + Y+ + G
Sbjct: 450 -----HEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGK 504
Query: 223 LDEARTFFDQMPQKNEIS-YNAMVAGYVQSNKMD-----MARELFEAMPSRNVSSWNTMI 276
+D+A MP K ++++++ ++D +A EL ++ P N +++ +
Sbjct: 505 IDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPD-NPANYVLLS 563
Query: 277 TGYGQNGDIAQARKLFDMMPQR 298
+ ++G+ A ++ +M +R
Sbjct: 564 KIHTESGNYHAAEEVRRVMQRR 585
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 10/223 (4%)
Query: 307 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALE-----LGKQIHGQV 361
+ G Y+EAL ++ K SL + F+ L + A + LG Q+H
Sbjct: 17 LKGLVSDQFYDEALRLY---KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLC 73
Query: 362 VKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 421
+K G + V N+L+ MY K VF+ + +D VS+ ++I + G +A+
Sbjct: 74 LKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAM 133
Query: 422 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMN-KDYSVTPSSKHYTCMID 480
+ + M G P + +L+ C+ G + F+++ D + S T ++D
Sbjct: 134 KLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 481 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 523
+ + A + M + SW A++ + N E+G
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNE-VSWTAMISGCVANQNYEMG 235
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 199/320 (62%), Gaps = 2/320 (0%)
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
++++ Y +G++ A K+F+ MP+R+ VSW A+ISG+AQ + L ++ ++++
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 333 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 392
N TF+ LS C AL G+ +H Q + G ++ + N+L+ MY KCG + +A +
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE-SMKTIGVKPDEITMVGVLSACSHAGL 451
F+ KDVVSWN+MIAGYA+HG QA+ +FE M G KPD IT +GVLS+C HAGL
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
+ G ++F M ++ + P HY+C++DLLGR G L+EA +L+ NMP +P + WG+LL
Sbjct: 339 VKEGRKFFNLM-AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Query: 512 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 571
+ R+HG+ G +AAE +EP + +V L+NLYA+ G W +A +R M+D G++
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKT 457
Query: 572 VTGYSWVEVQNKIHKFTVGD 591
G SW+E+ N + F D
Sbjct: 458 NPGCSWIEINNYVFMFKAED 477
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 21/286 (7%)
Query: 70 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYV 125
+A ++F+ MP+++VVSW AM+SG+AQ D +++ +M N ++ LL+A
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 126 HNGRIEEA----CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 181
+G + + C+ L N L+ + K L A ++FD+ +DVVSWN+
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 182 MISGYAQDGDMSQAKNLFD-----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ- 235
MI+GYAQ G QA LF+ D T+ ++S G++ E R FF+ M +
Sbjct: 293 MIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEH 352
Query: 236 --KNEIS-YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARKL 291
K E++ Y+ +V + + A EL E MP + N W +++ +GD+ +
Sbjct: 353 GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRA 412
Query: 292 FD--MMPQRDCVSWAAIISG-YAQTGHYEEALNMFIEIKRDGESLN 334
+ +M + DC + ++ YA G+++EA + +K G N
Sbjct: 413 AEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTN 458
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
+ DV ++++ Y G++ A +F++ P ++V +WTAM+SG+ Q +D + +
Sbjct: 152 ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSK 211
Query: 233 MPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGD 284
M + N+ ++ A+++ S + R + + S+ N++I+ Y + GD
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 285 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF-IEIKRDGESLNRSTFSCALS 343
+ A ++FD +D VSW ++I+GYAQ G +A+ +F + + + G + T+ LS
Sbjct: 272 LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLS 331
Query: 344 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVV 402
+C ++ G++ + + G + + L+ + + G + EA ++ E + K + V
Sbjct: 332 SCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV 391
Query: 403 SWNTMIAGYARHG 415
W +++ HG
Sbjct: 392 IWGSLLFSCRVHG 404
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 121/244 (49%), Gaps = 18/244 (7%)
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD--- 138
DV ++++ Y +G + A +VF +MP +N +SW +++ + R++ +L+
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 139 -SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW----NTMISGYAQDGDMS 193
S SD ++ L+ LG R + + + S+ N++IS Y + GD+
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 194 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-----NEISYNAMVAGY 248
A +FDQ ++DV +W +M++GY Q+G+ +A F+ M K + I+Y +++
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 249 VQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR-DCVSW 303
+ + R+ F M ++ ++ ++ G+ G + +A +L + MP + + V W
Sbjct: 334 RHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIW 393
Query: 304 AAII 307
+++
Sbjct: 394 GSLL 397
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%), Gaps = 49/239 (20%)
Query: 3 NGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD----------- 51
+G ++A +VF MP R+ VS+ AMISG+ + R + L+ KM +
Sbjct: 168 SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTAL 227
Query: 52 ------------------------LVSW----NVMLTGYVRNRRLGDARRLFDSMPQKDV 83
L S+ N +++ Y + L DA R+FD KDV
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV 287
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFD 138
VSWN+M++GYAQ+G A +A E+F M K +AI++ G+L++ H G ++E + F+
Sbjct: 288 VSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFN 347
Query: 139 SKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDM 192
++ EL ++CL+ + +L A +L + M ++ + V W +++ GD+
Sbjct: 348 LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDV 406
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 385
+KRDG S + S A+ +C G H +K G+ + ++G++L+ +Y G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 386 IGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 445
+ A VFE + E++VVSW MI+G+A+ L ++ M+ P++ T +LSA
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 446 CSHAGLIDRG----TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE 501
C+ +G + +G + + K Y +S +I + + G L++A +
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNS-----LISMYCKCGDLKDAFRIFDQFS-N 284
Query: 502 PPAASWGALLGASRIHGNTELGEKAAEMVFKMEP 535
SW +++ HG L +A E+ M P
Sbjct: 285 KDVVSWNSMIAGYAQHG---LAMQAIELFELMMP 315
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 203/333 (60%)
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
++ Y +GD+ A LF + RD + W A+ISGY Q G +E L ++ +++++ +
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
+ TF+ C+ + LE GK+ H ++K ++ V +AL+ MYFKC S + + VF+
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 395 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR 454
+ ++V++W ++I+GY HG + L FE MK G +P+ +T + VL+AC+H GL+D+
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 455 GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGAS 514
G E+FYSM +DY + P +HY M+D LGRAGRL+EA + + P + WG+LLGA
Sbjct: 329 GWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGAC 388
Query: 515 RIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTG 574
RIHGN +L E AA +++P N G YV+ +N YA+ G A +R +M + GV+K G
Sbjct: 389 RIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPG 448
Query: 575 YSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEEL 607
YS +E+Q ++H+F D H ++IY + E+
Sbjct: 449 YSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEM 481
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 23/293 (7%)
Query: 161 LGAARKLFDKMHVRDVVSWNTMISGYAQDG----------DMSQAKNLFDQSPHQDVFTW 210
L A LF + +RD++ WN MISGY Q G DM Q + + DQ VF
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRA 218
Query: 211 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 270
+ + +++G A + + N I +A+V Y + + +F+ + +RNV
Sbjct: 219 CSALD-RLEHGKRAHA-VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEI 326
+W ++I+GYG +G +++ K F+ M + C V++ +++ G ++ F +
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSM 336
Query: 327 KRD-GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 385
KRD G ++ + T L+ + V+K+ + V +LLG G+
Sbjct: 337 KRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEF---VMKSPCKEHPPVWGSLLGACRIHGN 393
Query: 386 IG---EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 435
+ A F ++ + ++ GYA G + A V M+ GVK D
Sbjct: 394 VKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD 446
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 3/164 (1%)
Query: 292 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
F + QR + G TG +EA+ + G + T++ L C
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGLLWS---SGLQVEPETYAVLLQECKQRKEY 124
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
GK+IH Q+ G+ ++ LL +Y G + A +F ++ +D++ WN MI+GY
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
+ G ++ L ++ M+ + PD+ T V ACS ++ G
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHG 228
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 23/284 (8%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI-- 115
+L Y + L A LF S+ +D++ WNAM+SGY Q G E ++Y M +
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 116 --SWNGLLAAYVHNGRIEEACR----LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 169
++ + A R+E R + +I + L+ + K ++FD
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 170 KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDE 225
++ R+V++W ++ISGY G +S+ F++ + + T+ +++ G++D+
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 226 ARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGY 279
F M + I Y AMV ++ ++ A E P + + W +++
Sbjct: 329 GWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGAC 388
Query: 280 GQNGDIA----QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
+G++ A K ++ P + ++ +GYA G E A
Sbjct: 389 RIHGNVKLLELAATKFLELDPT-NGGNYVVFANGYASCGLREAA 431
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/540 (30%), Positives = 271/540 (50%), Gaps = 46/540 (8%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN----------GYADEAREV 105
N +L Y + R DA +LFD MP +++V+WN ++ G Q G+ +R +
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 106 FYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 165
F + + +S+ GL+ + ++ +L +CLM VK+ G
Sbjct: 135 FTDVS-LDHVSFMGLIRLCTDSTNMKAGIQL------------HCLM---VKQ---GLES 175
Query: 166 KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 225
F +++ Y + G + +A+ +F+ +D+ W A+VS YV NGM+DE
Sbjct: 176 SCFPS---------TSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDE 226
Query: 226 ARTFFDQM-PQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGY 279
A M KN +++++++ + LF+ ++ ++ Y
Sbjct: 227 AFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMY 286
Query: 280 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 339
++ ++ AR+ F+ M R+ VSW A+I G+AQ G EA+ +F ++ + + TF+
Sbjct: 287 AKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFA 346
Query: 340 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 399
LS+CA +A+ KQ+ V K G V N+L+ Y + G++ EA F I E
Sbjct: 347 SVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREP 406
Query: 400 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF 459
D+VSW ++I A HGF +++L +FESM ++PD+IT + VLSACSH GL+ G F
Sbjct: 407 DLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCF 465
Query: 460 YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 519
M + Y + +HYTC+IDLLGRAG ++EA D++ +MP EP + A G IH
Sbjct: 466 KRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEK 525
Query: 520 TELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSR-MRDVGVQKVTGYSWV 578
E + A+ + ++EP Y +LSN Y + G W A +R R R+ K G SW+
Sbjct: 526 RESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 137/298 (45%), Gaps = 22/298 (7%)
Query: 43 LFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEA 102
LF Q D+ +L Y ++ L DAR F+SM ++VVSWNAM+ G+AQNG EA
Sbjct: 267 LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREA 326
Query: 103 REVFYQMPHKN----AISWNGLL---AAYVHNGRIEEACRLFDSKSDWELISW-NCLMGG 154
+F QM +N +++ +L A + I++ + K + +S N L+
Sbjct: 327 MRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISS 386
Query: 155 FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD---QSPHQDVFTWT 211
+ + L A F + D+VSW ++I A G ++ +F+ Q D T+
Sbjct: 387 YSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFL 446
Query: 212 AMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPS 266
++S G++ E F +M + +I Y ++ ++ +D A ++ +MP+
Sbjct: 447 EVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPT 506
Query: 267 RNVSSWNTMITGYGQNGDIAQ-----ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
+ TG + + A+KL ++ P + V+++ + + Y GH+ +A
Sbjct: 507 EPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKP-VNYSILSNAYVSEGHWNQA 563
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 137/323 (42%), Gaps = 53/323 (16%)
Query: 40 ARDLFDKMPQRDLVSWNVMLTGYV------------------RNRRLGD---------AR 72
AR +F+ + RDLV WN +++ YV +NR GD A
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Query: 73 R----------LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA 122
R LF Q D+ A+L+ YA++ + +ARE F M +N +SWN ++
Sbjct: 256 RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIV 315
Query: 123 AYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARK---LFDKMHVRD 175
+ NG EA RLF L +++ ++ K + ++ + K D
Sbjct: 316 GFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSAD 375
Query: 176 VVSW-NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
+S N++IS Y+++G++S+A F D+ +WT+++ +G +E+ F+ M
Sbjct: 376 FLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML 435
Query: 235 QK---NEISYNAMVAGYVQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQNGDIA 286
QK ++I++ +++ + F+ M + +I G+ G I
Sbjct: 436 QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFID 495
Query: 287 QARKLFDMMPQRDCVSWAAIISG 309
+A + + MP A +G
Sbjct: 496 EASDVLNSMPTEPSTHALAAFTG 518
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 136/297 (45%), Gaps = 23/297 (7%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQ 80
A+++ Y ++ S AR+ F+ M R++VSWN M+ G+ +N +A RLF M Q
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW----NGLLAAYVHNGRIEEACRL 136
D +++ ++LS A+ E ++V + K + + N L+++Y NG + EA
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 137 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR---DVVSWNTMISGYAQDGDMS 193
F S + +L+SW ++G + ++F+ M + D +++ ++S + G +
Sbjct: 400 FHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQ 459
Query: 194 QAKNLFDQSP-----HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAG- 247
+ F + + +T ++ + G +DEA + MP + A G
Sbjct: 460 EGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGG 519
Query: 248 -YVQSNKMDM---ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 300
+ + M A++L E P++ V +++ + Y G QA L +R+C
Sbjct: 520 CNIHEKRESMKWGAKKLLEIEPTKPV-NYSILSNAYVSEGHWNQA-ALLRKRERRNC 574
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 113/277 (40%), Gaps = 53/277 (19%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL--------- 52
++ H A F +M R+ VS+NAMI G+ +N A LF +M +L
Sbjct: 288 KSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFAS 347
Query: 53 ---------VSW---------------------NVMLTGYVRNRRLGDARRLFDSMPQKD 82
W N +++ Y RN L +A F S+ + D
Sbjct: 348 VLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPD 407
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMPHK---NAISWNGLLAAYVHNGRIEEACRLFDS 139
+VSW +++ A +G+A+E+ ++F M K + I++ +L+A H G ++E R F
Sbjct: 408 LVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKR 467
Query: 140 KSDWELIS-----WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQ 194
+++ I + CL+ + + A + + M +G + +
Sbjct: 468 MTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRE 527
Query: 195 -----AKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA 226
AK L + P + V ++ + + YV G ++A
Sbjct: 528 SMKWGAKKLLEIEPTKPV-NYSILSNAYVSEGHWNQA 563
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/584 (28%), Positives = 284/584 (48%), Gaps = 47/584 (8%)
Query: 19 RSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
R++ N + Y ++ A LFD +P ++ ++WNV L G +N L +A LFD M
Sbjct: 37 RTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEM 96
Query: 79 PQKDVVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLAAYVHNGRIEE 132
P++DVVSWN M+SG G+ + VF+ M P + S L V +G
Sbjct: 97 PERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIH 156
Query: 133 ACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDM 192
+ S + L+ WN +M + + + A +F M RDVVSWN +I + G+
Sbjct: 157 GNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNK 216
Query: 193 SQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAM 244
A + F + D +T + +VS L + + + N I A
Sbjct: 217 EVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAG 276
Query: 245 VAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWA 304
+ + + N++D + +LF R + W++++
Sbjct: 277 IDMFSKCNRLDDSVKLF-----RELEKWDSVLCN-------------------------- 305
Query: 305 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 364
++I Y+ E+AL +FI ++ TFS LS+ + L+ G +H V+K
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKL 364
Query: 365 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVF 424
G++ V +L+ MYFK GS+ A VF + KD++ WNT+I G AR+ ++L +F
Sbjct: 365 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 424
Query: 425 -ESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 483
+ + +KPD +T++G+L AC +AG ++ G + F SM K + V P ++HY C+I+LL
Sbjct: 425 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 484
Query: 484 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVL 543
R G + EA+D+ +PFEP + W +L AS G+T L E A+ + + EP +S Y++
Sbjct: 485 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 544
Query: 544 LSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKF 587
L +Y + RW ++ +R M + ++ G S + +++ + F
Sbjct: 545 LIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 154/348 (44%), Gaps = 46/348 (13%)
Query: 155 FVKRKMLGAARKLFDKMH--------VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD 206
V R +L + L +H VR N + Y + G + A LFD P ++
Sbjct: 10 LVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKN 69
Query: 207 VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELF----- 261
TW + G +NG L+ A FD+MP+++ +S+N M++G V + +F
Sbjct: 70 TITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQR 129
Query: 262 -EAMPSR-------------------------------NVSSWNTMITGYGQNGDIAQAR 289
E P+ N+ WN+++ Y + G A
Sbjct: 130 WEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYAL 189
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
+F M RD VSW +I + +G+ E AL+ F ++ + T S +S C+D+
Sbjct: 190 SVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLR 249
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 409
L GKQ +K G+ + V A + M+ KC + ++ +F +E+ D V N+MI
Sbjct: 250 ELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIG 309
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
Y+ H G+ AL +F T V+PD+ T VLS+ +A ++D G +
Sbjct: 310 SYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGAD 356
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 186/450 (41%), Gaps = 91/450 (20%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
++G +AL++F+ +P ++++++N + G +N + A DLFD+MP+RD+VSWN M++G
Sbjct: 51 KSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISG 110
Query: 62 YVRN-------RRLGDARR------------------------------LFDSMPQKDVV 84
V R D +R + + + ++V
Sbjct: 111 LVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLV 170
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF------D 138
WN+++ Y + G D A VF M ++ +SWN L+ + +G E A F +
Sbjct: 171 VWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREME 230
Query: 139 SKSDWELISWN-------------------CLMGGFVKRKM-LGAARKLFDKMH------ 172
+ D +S C+ GF+ + LGA +F K +
Sbjct: 231 IQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSV 290
Query: 173 --VRDVVSW-----NTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNG 221
R++ W N+MI Y+ A LF QS D FT+++++S +
Sbjct: 291 KLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAV 349
Query: 222 MLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMIT 277
MLD + + + +++ Y ++ +D+A +F +++ WNT+I
Sbjct: 350 MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIM 409
Query: 278 GYGQNGDIAQARKLFD--MMPQR---DCVSWAAIISGYAQTGHYEEALNMFIEI-KRDGE 331
G +N ++ +F+ +M Q D V+ I+ G E + +F + K G
Sbjct: 410 GLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGV 469
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQV 361
+ ++C + + + K I ++
Sbjct: 470 NPGNEHYACIIELLCRVGMINEAKDIADKI 499
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 39/215 (18%)
Query: 353 LGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI-------------------------- 386
L K +H Q+++ G+ + GN L +YFK GS+
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 387 -----GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT--M 439
A D+F+ + E+DVVSWNTMI+G GF + + VF M+ ++P E T +
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 440 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 499
+ L C G G +++ V +S ++D+ R G + A + M
Sbjct: 142 LASLVTCVRHGEQIHGNAICSGVSRYNLVVWNS-----VMDMYRRLGVFDYALSVFLTME 196
Query: 500 FEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 534
+ SW L+ + GN E+ ++ +ME
Sbjct: 197 -DRDVVSWNCLILSCSDSGNKEVALDQFWLMREME 230
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 284/560 (50%), Gaps = 66/560 (11%)
Query: 49 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMP--QKDVVSWNAMLSGYAQNG---YADEAR 103
+ ++V + + Y+++ RL A F+ +P +++ SWN +LSGY+++ Y+D
Sbjct: 36 EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLL 95
Query: 104 EVFYQMPHKNAI-SWNGLLA--AYVHNGRIEEACRLFD-------SKSDWELISWNCLMG 153
H + + S+N + A A V G +E + K D+ S L+
Sbjct: 96 LYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPS---LVE 152
Query: 154 GFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFT 209
+ + + +A+K+FD++ VR+ V W ++ GY + + LF D D T
Sbjct: 153 MYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALT 212
Query: 210 WTAMVS--GYVQNGMLDEA-------RTFFDQMPQKNEISYNAMVAGYVQSNKMDMAREL 260
+V G V G + + R+F DQ + Y+Q++ +DM
Sbjct: 213 LICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ-------------SDYLQASIIDM---- 255
Query: 261 FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 320
Y + + ARKLF+ R+ V W +ISG+A+ EA
Sbjct: 256 ------------------YVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAF 297
Query: 321 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 380
++F ++ R+ N+ T + L +C+ + +L GK +HG +++ G E + + MY
Sbjct: 298 DLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMY 357
Query: 381 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 440
+CG+I A VF+ + E++V+SW++MI + +G ++AL F MK+ V P+ +T V
Sbjct: 358 ARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFV 417
Query: 441 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF 500
+LSACSH+G + G + F SM +DY V P +HY CM+DLLGRAG + EA+ + NMP
Sbjct: 418 SLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPV 477
Query: 501 EPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNM 560
+P A++WGALL A RIH +L + AE + MEP S +YVLLSN+YA +G W +
Sbjct: 478 KPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCV 537
Query: 561 RSRMRDVGVQKVTGYSWVEV 580
R +M G +K G S EV
Sbjct: 538 RRKMGIKGYRKHVGQSATEV 557
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 225/508 (44%), Gaps = 99/508 (19%)
Query: 1 MRNGHCDSALRVFNTMP--RRSSVSYNAMISGYLRNAR--FSLARDLFDKMPQR--DLVS 54
+++ D A FN +P +R+ S+N ++SGY ++ +S L+++M + + S
Sbjct: 50 IQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDS 109
Query: 55 WNVMLT-------GYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFY 107
+N++ G + N L + + + + D V+ +++ YAQ G + A++VF
Sbjct: 110 FNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVA-PSLVEMYAQLGTMESAQKVFD 168
Query: 108 QMPHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGG--------- 154
++P +N++ W L+ Y+ + E RLF D+ + ++ CL+
Sbjct: 169 EIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKV 228
Query: 155 ---------------------------FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYA 187
+VK ++L ARKLF+ R+VV W T+ISG+A
Sbjct: 229 GKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFA 288
Query: 188 QDGDMSQAKNLFDQSPHQDVF----TWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNA 243
+ +A +LF Q + + T A++ G L ++
Sbjct: 289 KCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKS--------------- 333
Query: 244 MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 303
V GY+ N ++M + ++ + I Y + G+I AR +FDMMP+R+ +SW
Sbjct: 334 -VHGYMIRNGIEM-----------DAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISW 381
Query: 304 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG-KQIHGQ-- 360
+++I+ + G +EEAL+ F ++K N TF LS C+ ++ G KQ
Sbjct: 382 SSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441
Query: 361 ---VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS-WNTMIAGYARHGF 416
VV C V LLG + G IGEA + + K + S W +++ H
Sbjct: 442 DYGVVPEEEHYACMVD--LLG---RAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKE 496
Query: 417 GKQALMVFESMKTIGVKPDEITMVGVLS 444
A + E K + ++P++ ++ +LS
Sbjct: 497 VDLAGEIAE--KLLSMEPEKSSVYVLLS 522
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE--EK 399
L+ + L +Q+H +V+ G+E +G++L Y + + A F I ++
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 400 DVVSWNTMIAGYARHGFG--KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
+ SWNT+++GY++ L+++ M+ D +V + AC GL++ G
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 458 YF-----YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
++KD V PS ++++ + G +E AQ + +P + WG L+
Sbjct: 131 IHGLAMKNGLDKDDYVAPS------LVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVLM 182
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 176/630 (27%), Positives = 299/630 (47%), Gaps = 41/630 (6%)
Query: 3 NGHCDSALRVF----NTMPRRSSVSYNAMISGYLRNARFSLAR----DLFDKMPQRDLVS 54
+G C+S+L ++ N + S S+ + ++ R D+ D
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 55 WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA 114
+L+ Y + +G+A +F + K + WNAM++ YA+N Y A ++F M K+
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 115 ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR 174
+ DS + +IS ++G + K + A +LF +
Sbjct: 370 LP---------------------DSFTLSNVISCCSVLGLYNYGKSVHA--ELFKRPIQS 406
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM- 233
+ +++ Y++ G A +F +D+ W +++SG +NG EA F M
Sbjct: 407 TSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMK 466
Query: 234 -------PQKNEIS--YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGD 284
P + ++ NA + + + + NV +++I Y + G
Sbjct: 467 DDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGL 526
Query: 285 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 344
A K+F M + V+W ++IS Y++ E ++++F + G + + + L
Sbjct: 527 PEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Query: 345 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 404
+ A+L GK +HG ++ G + + NAL+ MY KCG A ++F+ ++ K +++W
Sbjct: 587 ISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITW 646
Query: 405 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 464
N MI GY HG AL +F+ MK G PD++T + ++SAC+H+G ++ G F M +
Sbjct: 647 NLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ 706
Query: 465 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 524
DY + P+ +HY M+DLLGRAG LEEA ++ MP E ++ W LL ASR H N ELG
Sbjct: 707 DYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGI 766
Query: 525 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKI 584
+AE + +MEP YV L NLY +G +A + M++ G+ K G SW+EV ++
Sbjct: 767 LSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRT 826
Query: 585 HKFTVGDCFHPEKDRIYAFLEELDLKMRRE 614
+ F G P K I+ L L M E
Sbjct: 827 NVFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 140/566 (24%), Positives = 256/566 (45%), Gaps = 77/566 (13%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQ-------RDLVSWNVMLTGYVRNRR----LGDARR 73
++++ Y++ A +FD Q RD+ WN M+ GY + RR +G RR
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRR 158
Query: 74 LFDSMPQKDVVSWNAMLSGYAQNG-YADEAREVFYQMPHKNAISWNGLLAA-----YVHN 127
+ + D S + ++S + G + E + + +N++ + L Y
Sbjct: 159 MLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKF 218
Query: 128 GRIEEACRLFDSKSDWE-LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGY 186
G +A R+F D ++ WN ++ GF + ++ L+ V +T +G
Sbjct: 219 GLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGA 278
Query: 187 AQDGDMSQAKN----------LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 236
G SQ++N + H D + T+++S Y + GM+ EA T F + K
Sbjct: 279 L--GACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDK 336
Query: 237 NEISYNAMVAGYVQSNKMDMARELF------EAMP------------------------- 265
+NAMVA Y +++ A +LF +P
Sbjct: 337 RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 266 ----SRNVSSWNT----MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 317
R + S +T ++T Y + G A +F M ++D V+W ++ISG + G ++
Sbjct: 397 AELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFK 456
Query: 318 EALNMFIEIKRDGESL--NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 375
EAL +F ++K D +SL + + + CA + AL G Q+HG ++KTG FVG++
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSS 516
Query: 376 LLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 435
L+ +Y KCG A VF + +++V+WN+MI+ Y+R+ + ++ +F M + G+ PD
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPD 576
Query: 436 EITMVGVLSACSH-AGLIDRGTEYFYSMNKDYSVTPSSKHY-TCMIDLLGRAGRLEEAQD 493
+++ VL A S A L+ + + Y++ PS H +ID+ + G + A++
Sbjct: 577 SVSITSVLVAISSTASLLKGKSLHGYTLRLG---IPSDTHLKNALIDMYVKCGFSKYAEN 633
Query: 494 LMRNMPFEPPAASWGALLGASRIHGN 519
+ + M +W ++ HG+
Sbjct: 634 IFKKMQ-HKSLITWNLMIYGYGSHGD 658
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 134/318 (42%), Gaps = 56/318 (17%)
Query: 301 VSWAAIISG---YAQTGHYEEALNMFIEIKRDGES---LNRSTFSCALSTCADIAALELG 354
+S A+I SG Q G Y +AL+++ K DG S + TF L C+ + L G
Sbjct: 22 ISPASINSGIRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYG 79
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE-------GIEEKDVVSWNTM 407
K IHG VV G+ F+ +L+ MY KCG + A VF+ G+ +DV WN+M
Sbjct: 80 KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSM 139
Query: 408 IAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR--GTEYFYSMNKD 465
I GY + K+ + F M GV+PD ++ V+S G R G + M ++
Sbjct: 140 IDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN 199
Query: 466 YSVTPSSKHYTCMIDL--------------------------------LGRAGRLEEAQD 493
S+ S T +ID+ G +G E + D
Sbjct: 200 -SLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 494 ---LMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLS--NLY 548
L +N + + S+ LGA N+ G + V KM HN YV S ++Y
Sbjct: 259 LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP-YVCTSLLSMY 317
Query: 549 AASGRWADAGNMRSRMRD 566
+ G +A + S + D
Sbjct: 318 SKCGMVGEAETVFSCVVD 335
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/611 (28%), Positives = 303/611 (49%), Gaps = 42/611 (6%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM----PQRDLVSWNV 57
+ G A VF+ MP R V++ A+ISG+++N KM D +
Sbjct: 173 KCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 58 MLTGYVRNRRLGDAR--RLFDSMPQKDVVS-----WNAMLSGYAQNGYADEAREVFYQMP 110
+ G+ LG + R K+ ++ ++M S Y+++G EA F ++
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292
Query: 111 HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL---------ISWNCLMGGFVKRKML 161
++ SW ++A+ +G +EE+ +F WE+ + +CL+ K ML
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMF-----WEMQNKGMHPDGVVISCLINELGKM-ML 346
Query: 162 GAARKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQ-SPHQDVFTWTAMVS 215
K F +R D N+++S Y + +S A+ LF + S + W M+
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 216 GYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMAREL----FEAMPSR 267
GY + + F ++ + + S ++++ + + + L +
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
+S N++I YG+ GD+ A ++F + ++W A+I+ Y E+A+ +F +
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMV 525
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 387
+ + T L C + +LE G+ IH + +T +E + AL+ MY KCG +
Sbjct: 526 SENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLE 585
Query: 388 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
++ ++F+ +KD V WN MI+GY HG + A+ +F+ M+ VKP T + +LSAC+
Sbjct: 586 KSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACT 645
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 507
HAGL+++G + F M++ Y V P+ KHY+C++DLL R+G LEEA+ + +MPF P W
Sbjct: 646 HAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIW 704
Query: 508 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 567
G LL + HG E+G + AE +P N G Y++L+N+Y+A+G+W +A R MR+
Sbjct: 705 GTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRES 764
Query: 568 GVQKVTGYSWV 578
GV K G+S V
Sbjct: 765 GVGKRAGHSVV 775
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 229/456 (50%), Gaps = 37/456 (8%)
Query: 93 YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA----CRLFDSKSDWELISW 148
Y++ G+ +A VF +MP ++ ++W +++ +V NG E C++ + SD + +
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 149 NCLMGGFVKRKMLGAAR--KLFDKMHVRDVVS-----WNTMISGYAQDGDMSQAKNLFDQ 201
L GF LGA + + V++ ++ ++M S Y++ G+ S+A F +
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRE 290
Query: 202 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV-QSNKMDMARE- 259
+D+F+WT++++ ++G ++E+ F +M K +++ + + KM + +
Sbjct: 291 LGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG 350
Query: 260 -LFEAMPSRNVSSW-----NTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISGYAQ 312
F R+ S N++++ Y + ++ A KLF + + + +W ++ GY +
Sbjct: 351 KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGK 410
Query: 313 TGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 372
+ + + +F +I+ G ++ ++ + +S+C+ I A+ LGK +H VVKT + V
Sbjct: 411 MKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV 470
Query: 373 GNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 432
N+L+ +Y K G + A +F + +V++WN MIA Y ++A+ +F+ M +
Sbjct: 471 VNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENF 529
Query: 433 KPDEITMVGVLSACSHAGLIDRG-------TEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 485
KP IT+V +L AC + G ++RG TE + MN S +ID+ +
Sbjct: 530 KPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAA--------LIDMYAKC 581
Query: 486 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 521
G LE++++L + + A W ++ +HG+ E
Sbjct: 582 GHLEKSRELF-DAGNQKDAVCWNVMISGYGMHGDVE 616
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 19/325 (5%)
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY 241
+IS YA G + + +F +D+F W +++ + NG + FF M + S
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQ-SP 123
Query: 242 NAMVAGYVQSNKMDM----------ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKL 291
+ A V S ++ L RN + + + Y + G + A +
Sbjct: 124 DHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLV 183
Query: 292 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRS---TFSCALSTCADI 348
FD MP RD V+W AIISG+ Q G E L ++ G +++ T C C+++
Sbjct: 184 FDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNL 243
Query: 349 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 408
AL+ G+ +HG VK G + FV +++ Y K G+ EA F + ++D+ SW ++I
Sbjct: 244 GALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSII 303
Query: 409 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF-----YSMN 463
A AR G +++ +F M+ G+ PD + + +++ L+ +G + + +
Sbjct: 304 ASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFS 363
Query: 464 KDYSVTPSSKHYTCMIDLLGRAGRL 488
D +V S C +LL A +L
Sbjct: 364 LDSTVCNSLLSMYCKFELLSVAEKL 388
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 139/295 (47%), Gaps = 14/295 (4%)
Query: 266 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 325
S N+ + +I+ Y G + ++F ++ +RD W +II + G Y +L F
Sbjct: 56 SENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFS 115
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK-TGYETGCFVGNALLGMYFKCG 384
+ G+S + T +S CA++ +G +HG V+K G++ VG + + Y KCG
Sbjct: 116 MLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCG 175
Query: 385 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV---KPDEITMVG 441
+ +A VF+ + ++DVV+W +I+G+ ++G + L M + G KP+ T+
Sbjct: 176 FLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLEC 235
Query: 442 VLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE 501
ACS+ G + G + + S + M ++G EA R + E
Sbjct: 236 GFQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDE 294
Query: 502 PPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMY---VLLSNLYAASGR 553
SW +++ + G+ E++ +M ++M+ N GM+ V++S L G+
Sbjct: 295 -DMFSWTSIIASLARSGDM---EESFDMFWEMQ--NKGMHPDGVVISCLINELGK 343
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 96/245 (39%), Gaps = 21/245 (8%)
Query: 345 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 404
C +LE ++ + ++ G FV + L+ Y G ++ VF + +D+ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 405 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 464
N++I + +G ++L F SM G PD T V+SAC+ GT + K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 465 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 524
++ + + G L++A + MP + +W A+ I G+ + GE
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAI-----ISGHVQNGE 207
Query: 525 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKI 584
+ + + H++G +D R + G Q + ++ +
Sbjct: 208 SEGGLGYLCKMHSAG---------------SDVDKPNPRTLECGFQACSNLGALKEGRCL 252
Query: 585 HKFTV 589
H F V
Sbjct: 253 HGFAV 257
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 169/578 (29%), Positives = 291/578 (50%), Gaps = 84/578 (14%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
D+ + +++ Y++ +++ DA ++ D MP++ + S NA +SG +NG+ +A ++M
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDA----FRMF 120
Query: 111 HKNAISWNGLLAAYVHN-----GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 165
+S +G+ + V + G IE +L +CL A +
Sbjct: 121 GDARVSGSGMNSVTVASVLGGCGDIEGGMQL------------HCL-----------AMK 157
Query: 166 KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 225
F+ +V +++S Y++ G+ A +F++ PH+ V T+ A +SG ++NG+++
Sbjct: 158 SGFE----MEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNL 213
Query: 226 ARTFFDQM-----PQKNEISYNAMVAGYVQSNKMDMAREL----------FEAM------ 264
+ F+ M + N++++ + + R+L FE M
Sbjct: 214 VPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALI 273
Query: 265 --------------------PSRNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDC 300
+RN+ SWN++I+G NG A +LF+ + + D
Sbjct: 274 DMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDS 333
Query: 301 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 360
+W ++ISG++Q G EA F + + + LS C+DI L+ GK+IHG
Sbjct: 334 ATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGH 393
Query: 361 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK--DVVSWNTMIAGYARHGFGK 418
V+K E FV +L+ MY KCG A +F+ E K D V WN MI+GY +HG +
Sbjct: 394 VIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECE 453
Query: 419 QALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCM 478
A+ +FE ++ V+P T VLSACSH G +++G++ F M ++Y PS++H CM
Sbjct: 454 SAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCM 513
Query: 479 IDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNS 538
IDLLGR+GRL EA++++ M + +LLG+ R H + LGE+AA + ++EP N
Sbjct: 514 IDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENP 572
Query: 539 GMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 576
+V+LS++YAA RW D ++R + + K+ G S
Sbjct: 573 APFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 203/467 (43%), Gaps = 102/467 (21%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRN-------RRLGDARRLFDS 77
A++S Y++ + + A + D+MP+R + S N ++G + N R GDAR
Sbjct: 70 TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSG 129
Query: 78 MPQKDVVSW-----------------------------NAMLSGYAQNGYADEAREVFYQ 108
M V S +++S Y++ G A +F +
Sbjct: 130 MNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEK 189
Query: 109 MPHKNAISWNGLLAAYVHNG------RIEEACRLFDSKSDWELISWNCL----------- 151
+PHK+ +++N ++ + NG + R F S+ ++ N +
Sbjct: 190 VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQY 249
Query: 152 ---MGGFVKRK------MLG--------------AARKLFDKMH-VRDVVSWNTMISGYA 187
+ G V +K M+G +A +F ++ R+++SWN++ISG
Sbjct: 250 GRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMM 309
Query: 188 QDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQM------PQKN 237
+G A LF++ + D TW +++SG+ Q G + EA FF++M P
Sbjct: 310 INGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK 369
Query: 238 EIS--YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 295
++ +A + N ++ + +A R++ ++I Y + G + AR++FD
Sbjct: 370 CLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF 429
Query: 296 -PQ-RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALEL 353
P+ +D V W +ISGY + G E A+ +F ++ + + +TF+ LS C+ +E
Sbjct: 430 EPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEK 489
Query: 354 GKQIHGQVVKT-GYE-----TGCFVGNALLGMYFKCGSIGEANDVFE 394
G QI + + GY+ GC + LLG + G + EA +V +
Sbjct: 490 GSQIFRLMQEEYGYKPSTEHIGCMID--LLG---RSGRLREAKEVID 531
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 158/325 (48%), Gaps = 30/325 (9%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM-----PQRDLVSWN 56
R G A R+F +P +S V+YNA ISG + N +L +F+ M + + V++
Sbjct: 176 RCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFV 235
Query: 57 VMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPH- 111
+T L R+L + +K + + A++ Y++ A VF ++
Sbjct: 236 NAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDT 295
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI-----SWNCLMGGFVKRKMLGAARK 166
+N ISWN +++ + NG+ E A LF+ K D E + +WN L+ GF + + A K
Sbjct: 296 RNLISWNSVISGMMINGQHETAVELFE-KLDSEGLKPDSATWNSLISGFSQLGKVIEAFK 354
Query: 167 LFDKM-HVRDVVSWNTMISGYAQDGDMSQAKN-------LFDQSPHQDVFTWTAMVSGYV 218
F++M V V S + S + D+ KN + + +D+F T+++ Y+
Sbjct: 355 FFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYM 414
Query: 219 QNGMLDEARTFFDQM-PQ-KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV----SSW 272
+ G+ AR FD+ P+ K+ + +N M++GY + + + A E+FE + V +++
Sbjct: 415 KCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATF 474
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQ 297
+++ G++ + ++F +M +
Sbjct: 475 TAVLSACSHCGNVEKGSQIFRLMQE 499
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
S N+ TF L +CA + + G+ +H QVVKTG+ F AL+ MY K + +A
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 392 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
V + + E+ + S N ++G +GF + A +F + G + +T+ VL C
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 283/540 (52%), Gaps = 44/540 (8%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK--- 112
++++ Y++ + AR+LFD + ++DVVSW AM+S +++ GY +A +F +M +
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 110
Query: 113 -NAISWNGLLAAYVHNGRIEEACRLFDS----KSDWELISWNCLMGGFVKRKMLGAARKL 167
N ++ +L + G ++E ++ S LI + L+ + + + AR
Sbjct: 111 ANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQ 170
Query: 168 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGML 223
FD M RD+VSWN MI GY + + +LF + D FT+ G L
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTF----------GSL 220
Query: 224 DEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNG 283
A + +E+ A+ G+ +S+ + +++ Y + G
Sbjct: 221 LRASIVVKCLEIVSELHGLAIKLGFGRSSAL-----------------IRSLVNAYVKCG 263
Query: 284 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGH-YEEALNMFIEIKRDGESLNRSTFSCAL 342
+A A KL + +RD +S A+I+G++Q + +A ++F ++ R ++ S L
Sbjct: 264 SLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSML 323
Query: 343 STCADIAALELGKQIHGQVVKTG-YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
C IA++ +G+QIHG +K+ +GN+L+ MY K G I +A FE ++EKDV
Sbjct: 324 KICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDV 383
Query: 402 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYS 461
SW ++IAGY RHG ++A+ ++ M+ +KP+++T + +LSACSH G + G + + +
Sbjct: 384 RSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDT 443
Query: 462 MNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP--FEPPAASWGALLGASRIHGN 519
M + + +H +C+ID+L R+G LEEA L+R+ +++WGA L A R HGN
Sbjct: 444 MINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGN 503
Query: 520 TELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVG-VQKVTGYSWV 578
+L + AA + MEP Y+ L+++YAA+G W +A N R M++ G K GYS V
Sbjct: 504 VQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 104/178 (58%)
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
N+ + +I Y + GD+ ARKLFD + +RD VSW A+IS +++ G++ +AL +F E+
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH 105
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 387
R+ N+ T+ L +C D+ L+ G QIHG V K V +ALL +Y +CG +
Sbjct: 106 REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKME 165
Query: 388 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 445
EA F+ ++E+D+VSWN MI GY + + +F+ M T G KPD T +L A
Sbjct: 166 EARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 203/450 (45%), Gaps = 61/450 (13%)
Query: 27 MISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV--- 83
+I YL+ AR LFD++ +RD+VSW M++ + R DA LF M ++DV
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 84 -VSWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLFD 138
++ ++L G E ++ + N I + LL+ Y G++EEA FD
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD 172
Query: 139 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----------------------DV 176
S + +L+SWN ++ G+ + LF M ++
Sbjct: 173 SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI 232
Query: 177 VS-----------------WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYV- 218
VS ++++ Y + G ++ A L + + +D+ + TA+++G+
Sbjct: 233 VSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQ 292
Query: 219 QNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMAREL--FEAMPSR---NV 269
QN +A F M + +E+ ++M+ + + R++ F S+ +V
Sbjct: 293 QNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDV 352
Query: 270 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
+ N++I Y ++G+I A F+ M ++D SW ++I+GY + G++E+A++++ ++ +
Sbjct: 353 ALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE 412
Query: 330 GESLNRSTFSCALSTCADIAALELGKQIHGQVV-KTGYETGCFVGNALLGMYFKCGSIGE 388
N TF LS C+ ELG +I+ ++ K G E + ++ M + G + E
Sbjct: 413 RIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEE 472
Query: 389 ANDVF---EGIEEKDVVSWNTMIAGYARHG 415
A + EGI +W + RHG
Sbjct: 473 AYALIRSKEGIVSLSSSTWGAFLDACRRHG 502
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 165/371 (44%), Gaps = 40/371 (10%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQ 80
+A++S Y R + AR FD M +RDLVSWN M+ GY N + LF M +
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 211
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW---------NGLLAAYVHNGRIE 131
D ++ ++L + + E+ ++ H AI L+ AYV G +
Sbjct: 212 PDCFTFGSLL----RASIVVKCLEIVSEL-HGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 132 EACRLFDSKSDWELISWNCLMGGFVKRKMLGA-ARKLFDKMHVR-----DVVSWNTMISG 185
A +L + +L+S L+ GF ++ + A +F M +R D V ++M+
Sbjct: 267 NAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM-IRMKTKMDEVVVSSMLKI 325
Query: 186 YAQDGDMSQAKNL--FDQSPHQ---DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS 240
++ + + F Q DV +++ Y ++G +++A F++M +K+ S
Sbjct: 326 CTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRS 385
Query: 241 YNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMP 296
+ +++AGY + + A +L+ M + ++ ++++ G K++D M
Sbjct: 386 WTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMI 445
Query: 297 QRDCVS-----WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
+ + + II A++G+ EEA + I K SL+ ST+ L C +
Sbjct: 446 NKHGIEAREEHLSCIIDMLARSGYLEEAYAL-IRSKEGIVSLSSSTWGAFLDACRRHGNV 504
Query: 352 ELGKQIHGQVV 362
+L K Q++
Sbjct: 505 QLSKVAATQLL 515
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 2/155 (1%)
Query: 357 IHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGF 416
IHG + G+ + + + L+ +Y K G + A +F+ I ++DVVSW MI+ ++R G+
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 417 GKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYT 476
AL++F+ M VK ++ T VL +C G + G + S+ K + + +
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKG-NCAGNLIVRS 152
Query: 477 CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
++ L R G++EEA+ +M E SW A++
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMI 186
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 146/343 (42%), Gaps = 68/343 (19%)
Query: 19 RSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV-RNRRLGDARRLFDS 77
RSS ++++ Y++ + A L + +RDL+S ++TG+ +N DA +F
Sbjct: 247 RSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKD 306
Query: 78 M----PQKDVVSWNAMLS----------GYAQNGYADEAREVFYQMPHKNAISWNGLLAA 123
M + D V ++ML G +G+A ++ ++ + + N+ L+
Sbjct: 307 MIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNS-----LIDM 361
Query: 124 YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMI 183
Y +G IE+A F+ + ++ SW ++I
Sbjct: 362 YAKSGEIEDAVLAFEEMKEKDVRSW-------------------------------TSLI 390
Query: 184 SGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 239
+GY + G+ +A +L+++ H+ + T+ +++S G + +D M K+ I
Sbjct: 391 AGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI 450
Query: 240 S-----YNAMVAGYVQSNKMDMARELF---EAMPSRNVSSWNTMITGYGQNGDI----AQ 287
+ ++ +S ++ A L E + S + S+W + ++G++
Sbjct: 451 EAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVA 510
Query: 288 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
A +L M P++ V++ + S YA G ++ ALN +K G
Sbjct: 511 ATQLLSMEPRKP-VNYINLASVYAANGAWDNALNTRKLMKESG 552
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 217/385 (56%), Gaps = 31/385 (8%)
Query: 324 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 383
IE+ G +R F +CA++ +LE K++H +++ + + N ++ M+ +C
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 384 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 443
SI +A VF+ + +KD+ SW+ M+ Y+ +G G AL +FE M G+KP+E T + V
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 444 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 503
AC+ G I+ +F SM ++ ++P ++HY ++ +LG+ G L EA+ +R++PFEP
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 504 AASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNM-RS 562
A W A+ +R+HG+ +L + E++ ++P + +++ + + NM S
Sbjct: 405 ADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA----VINKIPTPPPKSFKETNMVTS 460
Query: 563 RMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKL 622
+ R + + +T Y + K V YV T+
Sbjct: 461 KSRILEFRNLTFYKDEAKEMAAKKGVV--------------------------YVPDTRF 494
Query: 623 VLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVG 682
VLHD+++E KE L YHSE+LA+A+GI+ P + + +IKNLRVC DCHN IK +SKI+G
Sbjct: 495 VLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIG 554
Query: 683 RLIILRDSHRFHHFNEGICSCGDYW 707
R++I+RD+ RFHHF +G CSCGDYW
Sbjct: 555 RVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 332
N +I+ +G+ I A+++FD M +D SW ++ Y+ G ++AL++F E+ + G
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 333 LNRSTFSCALSTCADIAALELG-------KQIHGQVVKTGYETGCFVGNALLGMYFKCGS 385
N TF CA + +E K HG KT + G +LG+ KCG
Sbjct: 335 PNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLG------VLGVLGKCGH 388
Query: 386 IGEANDVFEGIEEKDVVSWNTMIAGYAR-HG 415
+ EA + + + + YAR HG
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----H 111
N++++ + + DA+R+FD M KD+ SW+ M+ Y+ NG D+A +F +M
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS 147
N ++ + A G IEEA FDS + IS
Sbjct: 335 PNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGIS 370
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 267/508 (52%), Gaps = 41/508 (8%)
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 144
S+N +LS YA D+ R + +K +S NG + +AC F + +
Sbjct: 73 SYNTLLSSYA---VCDKPRVTIFA--YKTFVS-NGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 145 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 204
I GF +D ++V+ N+++ Y G+ A +F + P
Sbjct: 127 QIHGIVTKMGF------------YDDIYVQ-----NSLVHFYGVCGESRNACKVFGEMPV 169
Query: 205 QDVFTWTAMVSGYVQNGMLDEARTFFDQMP-QKNEISYNAMVAGYVQSNKMDMARELFEA 263
+DV +WT +++G+ + G+ EA F +M + N +Y ++ + + + + +
Sbjct: 170 RDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGL 229
Query: 264 MPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
+ R ++ + N +I Y + ++ A ++F + ++D VSW ++ISG +EA
Sbjct: 230 ILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEA 289
Query: 320 LNMFI------EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 373
+++F IK DG L + LS CA + A++ G+ +H ++ G + +G
Sbjct: 290 IDLFSLMQTSSGIKPDGHIL-----TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIG 344
Query: 374 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVK 433
A++ MY KCG I A ++F GI K+V +WN ++ G A HG G ++L FE M +G K
Sbjct: 345 TAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK 404
Query: 434 PDEITMVGVLSACSHAGLIDRGTEYFYSM-NKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 492
P+ +T + L+AC H GL+D G YF+ M +++Y++ P +HY CMIDLL RAG L+EA
Sbjct: 405 PNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEAL 464
Query: 493 DLMRNMPFEPPAASWGALLGASRIHGNT-ELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 551
+L++ MP +P GA+L A + G EL ++ + +E +SG+YVLLSN++AA+
Sbjct: 465 ELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAAN 524
Query: 552 GRWADAGNMRSRMRDVGVQKVTGYSWVE 579
RW D +R M+ G+ KV G S++E
Sbjct: 525 RRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 166/387 (42%), Gaps = 50/387 (12%)
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
D+ N+++ Y G + A +VF +MP ++ +SW G++ + G +EA F SK
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTF-SKM 198
Query: 142 DWE--LISWNCLM--GGFVKRKMLGAARK--LFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
D E L ++ C++ G V LG + + + + + N +I Y + +S A
Sbjct: 199 DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDA 258
Query: 196 KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS---- 251
+F + +D +W +M+SG V EA F M + I + + V S
Sbjct: 259 MRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACAS 318
Query: 252 -NKMDMARELFEAMPSRNVSSWNT-----MITGYGQNGDIAQARKLFDMMPQRDCVSWAA 305
+D R + E + + + W+T ++ Y + G I A ++F+ + ++ +W A
Sbjct: 319 LGAVDHGRWVHEYILTAGI-KWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNA 377
Query: 306 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 365
++ G A GH E+L F E+ + G N TF AL+ C ++ G++ ++
Sbjct: 378 LLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSRE 437
Query: 366 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 425
Y ++F +E + MI R G +AL E
Sbjct: 438 Y------------------------NLFPKLEH-----YGCMIDLLCRAGLLDEAL---E 465
Query: 426 SMKTIGVKPDEITMVGVLSACSHAGLI 452
+K + VKPD +LSAC + G +
Sbjct: 466 LVKAMPVKPDVRICGAILSACKNRGTL 492
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 157/357 (43%), Gaps = 37/357 (10%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP-QRDLVSWNVML--T 60
G +A +VF MP R VS+ +I+G+ R + A D F KM + +L ++ +L +
Sbjct: 155 GESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSS 214
Query: 61 GYVRNRRLGDARR--LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN 118
G V LG + + + NA++ Y + +A VF ++ K+ +SWN
Sbjct: 215 GRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWN 274
Query: 119 GLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV-- 176
+++ VH R +EA LF I + G + +L A L H R V
Sbjct: 275 SMISGLVHCERSKEAIDLFSLMQTSSGIKPD----GHILTSVLSACASLGAVDHGRWVHE 330
Query: 177 ------VSWNT-----MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 225
+ W+T ++ YA+ G + A +F+ ++VFTW A++ G +G E
Sbjct: 331 YILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLE 390
Query: 226 ARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR------NVSSWNTM 275
+ +F++M + N +++ A + + +D R F M SR + + M
Sbjct: 391 SLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCM 450
Query: 276 ITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISGYAQTGHY----EEALNMFIEIK 327
I + G + +A +L MP + D AI+S G +E L+ F++I+
Sbjct: 451 IDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIE 507
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 22/296 (7%)
Query: 273 NTMITGYGQNGDIAQARK--LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
N ++T G++ D A L + S+ ++S YA + + +G
Sbjct: 42 NKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNG 101
Query: 331 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 390
S + TF C + + GKQIHG V K G+ +V N+L+ Y CG A
Sbjct: 102 FSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNAC 161
Query: 391 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 450
VF + +DVVSW +I G+ R G K+AL F M V+P+ T V VL + G
Sbjct: 162 KVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVG 218
Query: 451 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 510
+ G + K S+ S + +ID+ + +L +A + + + SW ++
Sbjct: 219 CLSLGKGIHGLILKRASLI-SLETGNALIDMYVKCEQLSDAMRVFGELE-KKDKVSWNSM 276
Query: 511 LGASRIHGNTELGEKAAEMVFKMEPHNSGM----YVLLSNLYAAS-------GRWA 555
+ + +H E ++A ++ F + +SG+ ++L S L A + GRW
Sbjct: 277 I-SGLVH--CERSKEAIDL-FSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV 328
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/603 (26%), Positives = 302/603 (50%), Gaps = 37/603 (6%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVM--- 58
+ G ++A VF + R +S NA+++G+ N F A + ++M D + ++
Sbjct: 338 KCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVV 397
Query: 59 ----LTGYVRNRRLGDARRLFD---SMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
+ G + R G A + M + + N+++ Y + G +A +F H
Sbjct: 398 SITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTH 457
Query: 112 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS-WNCLMGGFVKRKMLGAARKLFDK 170
++ +SWN +++A+ NG +A LF E++S ++C + L +
Sbjct: 458 RDLVSWNSMISAFSQNGFTHKAKNLFK-----EVVSEYSC------SKFSLSTVLAILTS 506
Query: 171 MHVRDVVSWNTMISGYAQD-GDMSQA-KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEART 228
D + + + + Q GD++ A L S +D+ +W +++SG +G E+
Sbjct: 507 CDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLR 566
Query: 229 FFDQMPQKNEISYNAM-VAGYVQSNK---MDMARELFEAMPSRNVSSW-----NTMITGY 279
F M ++ +I ++ + + G + ++ + + F + +++ NT+IT Y
Sbjct: 567 AFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMY 626
Query: 280 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 339
G+ DI A K+F ++ + SW +IS +Q E +F +K + N TF
Sbjct: 627 GRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEP---NEITFV 683
Query: 340 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 399
LS + + G Q H +++ G++ FV AL+ MY CG + VF
Sbjct: 684 GLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVN 743
Query: 400 DVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTEY 458
+ +WN++I+ + HG G++A+ +F+ + + ++P++ + + +LSACSH+G ID G Y
Sbjct: 744 SISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSY 803
Query: 459 FYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG 518
+ M + + V P ++H ++D+LGRAG+L EA + + + A WGALL A HG
Sbjct: 804 YKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHG 863
Query: 519 NTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWV 578
+T+LG++ AE++F+MEP N+ Y+ L+N Y G W +A +R + D ++K+ GYS +
Sbjct: 864 DTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVI 923
Query: 579 EVQ 581
+V+
Sbjct: 924 DVR 926
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/584 (25%), Positives = 261/584 (44%), Gaps = 84/584 (14%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM------ 78
NA+++ Y + S A +F M RD+VSWN ++T + N + + F SM
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 79 -----------------------------------PQKDVVSWNAMLSGYAQNGYADEAR 103
P+ V N+++S Y++ G + A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 104 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE--------LISWNCLMGGF 155
VF ++ ++ IS N +L + NG EEA + + + ++S + G
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 156 V----KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT 211
R + G ++ +M R + N++I Y + G +QA+ LF + H+D+ +W
Sbjct: 407 SFSREGRAVHGYTVRM--EMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWN 464
Query: 212 AMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS 271
+M+S + QNG +A+ F ++ + S ++ D + L + ++V
Sbjct: 465 SMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSL---IFGKSVHC 521
Query: 272 WNTMITGYGQNGDIAQA-RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
W + GD+ A +L M RD SW ++ISG A +GH+ E+L F + R+G
Sbjct: 522 WLQKL------GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREG 575
Query: 331 E-SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 389
+ + T +S ++ + G+ HG +K+ E + N L+ MY +C I A
Sbjct: 576 KIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESA 635
Query: 390 NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 449
VF I + ++ SWN +I+ +++ G++ +F ++K ++P+EIT VG+LSA +
Sbjct: 636 VKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQL 692
Query: 450 GLIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 508
G G + + + + + + P ++D+ G LE + RN +A W
Sbjct: 693 GSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVNSISA-WN 749
Query: 509 ALLGASRIHGNTELGEKAAEMVFK-------MEPHNSGMYVLLS 545
+++ A HG +GEKA E+ FK MEP+ S LLS
Sbjct: 750 SVISAHGFHG---MGEKAMEL-FKELSSNSEMEPNKSSFISLLS 789
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 154/657 (23%), Positives = 275/657 (41%), Gaps = 124/657 (18%)
Query: 27 MISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----- 81
+++ Y R + LFD++ ++D++ WN M+T +N R A LF M K
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFD 187
Query: 82 ----------------------------------DVVSWNAMLSGYAQNGYADEAREVFY 107
D NA+++ YA+ A VF
Sbjct: 188 STTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFT 247
Query: 108 QMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGA 163
M H++ +SWN ++ + NG ++ + F S + + + ++++C++ + L
Sbjct: 248 HMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTL 307
Query: 164 ARKLF---------DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMV 214
L + HV N++IS Y++ GD A+ +F++ +DV + A++
Sbjct: 308 GESLHGLVIKSGYSPEAHVS---VGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAIL 364
Query: 215 SGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS--NKMDMARE--------LFEAM 264
+G+ NGM +EA +QM ++I + + S + +RE + M
Sbjct: 365 NGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEM 424
Query: 265 PSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 324
SR + N++I YG+ G QA LF RD VSW ++IS ++Q G +A N+F
Sbjct: 425 QSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFK 484
Query: 325 EIKRD--GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 382
E+ + + ST L++C +L GK +H + K G T F+ +
Sbjct: 485 EVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMS---- 540
Query: 383 CGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDEITMVG 441
E +D+ SWN++I+G A G ++L F++M G ++ D IT++G
Sbjct: 541 --------------ETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLG 586
Query: 442 VLSACSHAGLIDRGTEY---------------------FYSMNKDYSVT---------PS 471
+SA + GL+ +G + Y KD P+
Sbjct: 587 TISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPN 646
Query: 472 SKHYTCMIDLLG--RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA-AE 528
+ C+I L +AGR E L RN+ EP ++ LL AS G+T G +A
Sbjct: 647 LCSWNCVISALSQNKAGR--EVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCH 704
Query: 529 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIH 585
++ + N + L ++Y++ G + R+ GV ++ ++ V + H
Sbjct: 705 LIRRGFQANPFVSAALVDMYSSCGMLETGMKV---FRNSGVNSISAWNSVISAHGFH 758
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 178/360 (49%), Gaps = 14/360 (3%)
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
++D+ + + +++ Y + G++ + LFD+ +DV W +M++ QNG A F +
Sbjct: 119 LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIE 178
Query: 233 MPQK-NEISYNAMVAGYVQSNKMDMAREL-------FEAMPSRNVSSWNTMITGYGQNGD 284
M K NE ++ + + ++R+ E + S N ++ Y + +
Sbjct: 179 MIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGEN 238
Query: 285 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 344
++ A +F M RD VSW I++ GH ++L F + G+ + TFSC +S
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 345 CADIAALELGKQIHGQVVKTGY--ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVV 402
C+ I L LG+ +HG V+K+GY E VGN+++ MY KCG A VFE + +DV+
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVI 358
Query: 403 SWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRG-TEYFY 460
S N ++ G+A +G ++A + M+++ ++PD T+V + S C G + Y
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 461 SMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 520
++ + + + + +ID+ G+ G +A+ L + SW +++ A +G T
Sbjct: 419 TVRMEMQ-SRALEVINSVIDMYGKCGLTTQAELLFKTTTHR-DLVSWNSMISAFSQNGFT 476
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 199/415 (47%), Gaps = 45/415 (10%)
Query: 50 RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM 109
+DL + + +LT Y R L + LFD + +KDV+ WN+M++ QNG A +F +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 110 PHKNA---ISWNGLLAAYVHNGRIEEACRLFDSKS-------DWELISWNCLMGGFVKRK 159
HK + L A+ + + + C + + D L N LM + K +
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC--NALMNLYAKGE 237
Query: 160 MLGAARKLFDKMHVRDVVSWNTMISGYAQDG----DMSQAKNLFDQSPHQDVFTWTAMVS 215
L +A +F M RD+VSWNT+++ +G + K++ D T++ ++S
Sbjct: 238 NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297
Query: 216 GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTM 275
A + +++ + + +GY P +VS N++
Sbjct: 298 ----------ACSSIEELTLGESLHGLVIKSGY---------------SPEAHVSVGNSI 332
Query: 276 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR-DGESLN 334
I+ Y + GD A +F+ + RD +S AI++G+A G +EEA + +++ D +
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF-VGNALLGMYFKCGSIGEANDVF 393
+T S C D++ G+ +HG V+ ++ V N+++ MY KCG +A +F
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF 452
Query: 394 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT--IGVKPDEITMVGVLSAC 446
+ +D+VSWN+MI+ ++++GF +A +F+ + + K T++ +L++C
Sbjct: 453 KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 235/431 (54%), Gaps = 22/431 (5%)
Query: 164 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVS---- 215
A ++F + +V+ +N MI Y+ G ++ + F + D +T+ ++
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 216 ------GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 269
G +G L RT F ++ + +V Y +M A+++F+ M RNV
Sbjct: 115 LSDLRFGKCVHGEL--IRTGFHRLGKIR----IGVVELYTSGGRMGDAQKVFDEMSERNV 168
Query: 270 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
WN MI G+ +GD+ + LF M +R VSW ++IS ++ G EAL +F E+
Sbjct: 169 VVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQ 228
Query: 330 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG-YETGCFVGNALLGMYFKCGSIGE 388
G + +T L A + L+ GK IH +G ++ VGNAL+ Y K G +
Sbjct: 229 GFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEA 288
Query: 389 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACS 447
A +F ++ ++VVSWNT+I+G A +G G+ + +F++M G V P+E T +GVL+ CS
Sbjct: 289 ATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCS 348
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 507
+ G ++RG E F M + + + ++HY M+DL+ R+GR+ EA ++NMP AA W
Sbjct: 349 YTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMW 408
Query: 508 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 567
G+LL A R HG+ +L E AA + K+EP NSG YVLLSNLYA GRW D +R+ M+
Sbjct: 409 GSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKN 468
Query: 568 GVQKVTGYSWV 578
++K TG S +
Sbjct: 469 RLRKSTGQSTI 479
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 174/395 (44%), Gaps = 44/395 (11%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 130
A R+F + +V+ +NAM+ Y+ G E+ F M + G+ A +
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSR------GIWADEYTYAPL 108
Query: 131 EEACRLFDSKSDWELISWNCLMGGFVKRKM-------------------LGAARKLFDKM 171
++C S SD C+ G ++ +G A+K+FD+M
Sbjct: 109 LKSC---SSLSDLRF--GKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEM 163
Query: 172 HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF- 230
R+VV WN MI G+ GD+ + +LF Q + + +W +M+S + G EA F
Sbjct: 164 SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFC 223
Query: 231 ---DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN-----VSSWNTMITGYGQN 282
DQ +E + ++ +D + + S ++ N ++ Y ++
Sbjct: 224 EMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS 283
Query: 283 GDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCA 341
GD+ A +F M +R+ VSW +ISG A G E +++F + +G+ + N +TF
Sbjct: 284 GDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGV 343
Query: 342 LSTCADIAALELGKQIHGQVV-KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EK 399
L+ C+ +E G+++ G ++ + E A++ + + G I EA + +
Sbjct: 344 LACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNA 403
Query: 400 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 434
+ W ++++ HG K A + +M+ + ++P
Sbjct: 404 NAAMWGSLLSACRSHGDVKLAEVA--AMELVKIEP 436
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 165/352 (46%), Gaps = 46/352 (13%)
Query: 31 YLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAML 90
Y R A+ +FD+M +R++V WN+M+ G+ + + LF M ++ +VSWN+M+
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMI 206
Query: 91 SGYAQNGYADEAREVFYQM------PHKNAI-------SWNGLL--AAYVHNGRIEEACR 135
S ++ G EA E+F +M P + + + G+L ++H+ E+
Sbjct: 207 SSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHS--TAESSG 264
Query: 136 LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
LF D+ + N L+ + K L AA +F KM R+VVSWNT+ISG A +G
Sbjct: 265 LF---KDFITVG-NALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFG 320
Query: 196 KNLFDQ-------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNA 243
+LFD +P++ F Y G ++ F M ++ ++ Y A
Sbjct: 321 IDLFDAMIEEGKVAPNEATFLGVLACCSY--TGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 244 MVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGDI----AQARKLFDMMPQR 298
MV +S ++ A + + MP + N + W ++++ +GD+ A +L + P
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPG- 437
Query: 299 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 350
+ ++ + + YA+ G +++ + +K+ NR S ST D++
Sbjct: 438 NSGNYVLLSNLYAEEGRWQDVEKVRTLMKK-----NRLRKSTGQSTICDVSV 484
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 109/271 (40%), Gaps = 55/271 (20%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G A +VF+ M R+ V +N MI G+ + LF +M +R +VSWN M++
Sbjct: 151 GRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLS 210
Query: 64 RNRRLGDARRLFDSMPQK----------------------DVVSW--------------- 86
+ R +A LF M + D W
Sbjct: 211 KCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFI 270
Query: 87 ---NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW 143
NA++ Y ++G + A +F +M +N +SWN L++ NG+ E LFD+ +
Sbjct: 271 TVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEE 330
Query: 144 ELISWN----------CLMGGFVKR--KMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 191
++ N C G V+R ++ G + F K+ R + M+ ++ G
Sbjct: 331 GKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERF-KLEAR-TEHYGAMVDLMSRSGR 388
Query: 192 MSQAKNLFDQSP-HQDVFTWTAMVSGYVQNG 221
+++A P + + W +++S +G
Sbjct: 389 ITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 170/585 (29%), Positives = 288/585 (49%), Gaps = 61/585 (10%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV-------- 53
+ G D A +F MP R S+NA+I+ +N +F +M RD V
Sbjct: 108 KCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM-NRDGVRATETSFA 166
Query: 54 ---------------------------SWNV-----MLTGYVRNRRLGDARRLFDSMPQK 81
S NV ++ Y + R + DARR+FD +
Sbjct: 167 GVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNP 226
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAY---------VHNGRIEE 132
VSWN ++ Y + G+ DEA +F++M N N +++ + G++
Sbjct: 227 SDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIH 286
Query: 133 ACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDM 192
A + S ++S + +VK L +AR++FD+ +D+ SW + +SGYA G
Sbjct: 287 AIAVKLSVVADTVVS-TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 193 SQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS- 251
+A+ LFD P +++ +W AM+ GYV DEA F M Q+ E N + +
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVC 405
Query: 252 ---NKMDMARE----LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ-RDCVSW 303
+ + M ++ ++ NV N ++ YG+ G + A F M + RD VSW
Sbjct: 406 SGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSW 465
Query: 304 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 363
A+++G A+ G E+AL+ F ++ + + ++ T + L+ CA+I AL LGK IHG +++
Sbjct: 466 NALLTGVARVGRSEQALSFFEGMQVEAKP-SKYTLATLLAGCANIPALNLGKAIHGFLIR 524
Query: 364 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMV 423
GY+ + A++ MY KC A +VF+ +D++ WN++I G R+G K+ +
Sbjct: 525 DGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFEL 584
Query: 424 FESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 483
F ++ GVKPD +T +G+L AC G ++ G +YF SM+ Y ++P +HY CMI+L
Sbjct: 585 FMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYC 644
Query: 484 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 528
+ G L + ++ + MPF+PP + A + + ++LG AA+
Sbjct: 645 KYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAK 689
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 213/426 (50%), Gaps = 51/426 (11%)
Query: 79 PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD 138
P + N + Y + G D+ARE+F +MP ++ SWN ++ A NG +E R+F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 139 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW---------NTMISGYAQD 189
+ + + G +K L +L ++H VV + +++ Y +
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHC-AVVKYGYSGNVDLETSIVDVYGKC 210
Query: 190 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAG-- 247
MS A+ +FD+ + +W +V Y++ G DEA F +M + N N V+
Sbjct: 211 RVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVM 270
Query: 248 -------------------------------------YVQSNKMDMARELFEAMPSRNVS 270
YV+ ++++ AR +F+ S+++
Sbjct: 271 LACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLK 330
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
SW + ++GY +G +AR+LFD+MP+R+ VSW A++ GY ++EAL+ ++++
Sbjct: 331 SWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEI 390
Query: 331 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 390
E+++ T L+ C+ I+ +++GKQ HG + + GY+T V NALL MY KCG++ AN
Sbjct: 391 ENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSAN 450
Query: 391 DVFEGIEE-KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 449
F + E +D VSWN ++ G AR G +QAL FE M+ + KP + T+ +L+ C++
Sbjct: 451 IWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANI 509
Query: 450 GLIDRG 455
++ G
Sbjct: 510 PALNLG 515
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 153/320 (47%), Gaps = 7/320 (2%)
Query: 246 AGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAA 305
A VQ+ K+ F +P + N I YG+ G + AR+LF+ MP+RD SW A
Sbjct: 75 ALVVQARKVQSHLVTFSPLPP--IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNA 132
Query: 306 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 365
+I+ AQ G +E MF + RDG ++F+ L +C I L L +Q+H VVK G
Sbjct: 133 VITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYG 192
Query: 366 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 425
Y + +++ +Y KC + +A VF+ I VSWN ++ Y GF +A+++F
Sbjct: 193 YSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFF 252
Query: 426 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 485
M + V+P T+ V+ ACS + ++ G + +++ SV + T + D+ +
Sbjct: 253 KMLELNVRPLNHTVSSVMLACSRSLALEVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKC 311
Query: 486 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLS 545
RLE A+ + + SW + + + G L +A E+ M N + +
Sbjct: 312 DRLESARRVF-DQTRSKDLKSWTSAMSGYAMSG---LTREARELFDLMPERNIVSWNAML 367
Query: 546 NLYAASGRWADAGNMRSRMR 565
Y + W +A + + MR
Sbjct: 368 GGYVHAHEWDEALDFLTLMR 387
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 173/425 (40%), Gaps = 82/425 (19%)
Query: 197 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDM 256
+L SP +F + Y + G +D+AR F++MP+++ S+NA++ Q+ D
Sbjct: 86 HLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDE 145
Query: 257 ARELFEAMPSRNVSSWNTMITG-----------------------YGQNGDI-------- 285
+F M V + T G YG +G++
Sbjct: 146 VFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVD 205
Query: 286 --------AQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE-IKRDGESLNRS 336
+ AR++FD + VSW I+ Y + G +EA+ MF + ++ + LN
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNH- 264
Query: 337 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 396
T S + C+ ALE+GK IH VK V ++ MY KC + A VF+
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 397 EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV------------------------ 432
KD+ SW + ++GYA G ++A +F+ M +
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLT 384
Query: 433 -------KPDEITMVGVLSACSHAGLIDRGTE---YFYSMNKDYSVTPSSKHYTCMIDLL 482
D +T+V +L+ CS + G + + Y D +V ++ ++D+
Sbjct: 385 LMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANA----LLDMY 440
Query: 483 GRAGRLEEAQDLMRNMPFEPPAASWGALL-GASRIHGNTELGEKAAE-MVFKMEPHNSGM 540
G+ G L+ A R M SW ALL G +R+ G +E E M + +P +
Sbjct: 441 GKCGTLQSANIWFRQMSELRDEVSWNALLTGVARV-GRSEQALSFFEGMQVEAKPSKYTL 499
Query: 541 YVLLS 545
LL+
Sbjct: 500 ATLLA 504
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 9/196 (4%)
Query: 344 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 403
+C+ A + +++ +V F+ N + Y KCG + +A ++FE + E+D S
Sbjct: 70 SCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGS 129
Query: 404 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI--DRGTEYFYS 461
WN +I A++G + +F M GV+ E + GVL +C GLI R +
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLRQLHC 186
Query: 462 MNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 521
Y + + T ++D+ G+ + +A+ + + P SW ++ R +
Sbjct: 187 AVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIV---RRYLEMG 242
Query: 522 LGEKAAEMVFKMEPHN 537
++A M FKM N
Sbjct: 243 FNDEAVVMFFKMLELN 258
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 194/711 (27%), Positives = 301/711 (42%), Gaps = 168/711 (23%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQ 80
A++ Y + AR +FDKM +D+V+WN M++G +N A LF M
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 81 KDVVSWNAMLSGYAQNGYADEAR---------------------------------EVFY 107
D VS ++ ++ +D R VF
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFE 258
Query: 108 QMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE----------------------- 144
++ K+ SW ++AAY HNG EE LFD +++
Sbjct: 259 EVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVK 318
Query: 145 ------------LIS----WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQ 188
LI LM + K L A +LF + RDVVSW+ MI+ Y Q
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 189 DGDMSQAKNLF------------------------------DQSPH---------QDVFT 209
G +A +LF +S H ++ T
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET 438
Query: 210 WTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 269
TA++S Y + G A F+++P K+ +++NA+ GY Q + A ++++ M V
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGV 498
Query: 270 SSWNTMITG-----------------YGQ------NGDIAQARKLFDMMPQRDC------ 300
+ + G YGQ + + A L +M + D
Sbjct: 499 CPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 301 -----------VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
VSW +++GY G EEA+ F ++K + N TF + A+++
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELS 618
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 409
AL +G +H +++ G+ + VGN+L+ MY KCG I + F I K +VSWNTM++
Sbjct: 619 ALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLS 678
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 469
YA HG A+ +F SM+ +KPD ++ + VLSAC HAGL++ G F M + + +
Sbjct: 679 AYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIE 738
Query: 470 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 529
+HY CM+DLLG+AG EA ++MR M + WGALL +SR+H N L A
Sbjct: 739 AEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQ 798
Query: 530 VFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEV 580
+ K+EP N Y+ R + N+ SR ++KV SW+EV
Sbjct: 799 LVKLEPLNPSH-------YSQDRRLGEVNNV-SR-----IKKVPACSWIEV 836
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 152/595 (25%), Positives = 249/595 (41%), Gaps = 113/595 (18%)
Query: 10 LRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLG 69
L+V ++ +N +I+ Y R L+R +FD + +V WN M+ GY R
Sbjct: 22 LQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHR 81
Query: 70 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA------- 122
+A F M ++ + + +A A M K + + L+A
Sbjct: 82 EALGFFGYMSEEKGIDPDKYSFTFALKACAG-------SMDFKKGLRIHDLIAEMGLESD 134
Query: 123 AYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 182
Y+ +E C+ D L +AR++FDKMHV+DVV+WNTM
Sbjct: 135 VYIGTALVEMYCKARD----------------------LVSARQVFDKMHVKDVVTWNTM 172
Query: 183 ISGYAQDGDMSQAKNLFDQS-------PHQDVFTWTAMVS------------------GY 217
+SG AQ+G S A LF H ++ VS G+
Sbjct: 173 VSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF 232
Query: 218 V---QNGMLD---------EARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 265
+ +G++D A + F+++ +K+E S+ M+A Y + + ELF+ M
Sbjct: 233 IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 266 SR---------------------------------------NVSSWNTMITGYGQNGDIA 286
+ +VS ++++ Y + G++
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
A +LF + RD VSW+A+I+ Y Q G ++EA+++F ++ R N T + L CA
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 406
+AA LGK IH +K E+ A++ MY KCG A FE + KD V++N
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNA 472
Query: 407 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 466
+ GY + G +A V+++MK GV PD TMVG+L C+ RG+ + + K +
Sbjct: 473 LAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK-H 531
Query: 467 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 521
+I++ + L A L FE SW ++ +HG E
Sbjct: 532 GFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 146/582 (25%), Positives = 247/582 (42%), Gaps = 97/582 (16%)
Query: 42 DLFDKMP-QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 100
DL +M + D+ ++ Y + R L AR++FD M KDVV+WN M+SG AQNG +
Sbjct: 124 DLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSS 183
Query: 101 EAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDS---KSDWELISWNCLMG 153
A +F+ M + +S L+ A V + CR K + + L+
Sbjct: 184 AALLLFHDMRSCCVDIDHVSLYNLIPA-VSKLEKSDVCRCLHGLVIKKGFIFAFSSGLID 242
Query: 154 GFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD------------- 200
+ L AA +F+++ +D SW TM++ YA +G + LFD
Sbjct: 243 MYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVA 302
Query: 201 --------------------------QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
Q DV T+++S Y + G L+ A F +
Sbjct: 303 AASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE 362
Query: 235 QKNEISYNAMVAGYVQSNKMDMARELFEAM-----------------------PSR---- 267
++ +S++AM+A Y Q+ + D A LF M SR
Sbjct: 363 DRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKS 422
Query: 268 ------------NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 315
+ + +I+ Y + G + A K F+ +P +D V++ A+ GY Q G
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD 482
Query: 316 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 375
+A +++ +K G + T L TCA + G ++GQ++K G+++ C V +A
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHA 542
Query: 376 LLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 434
L+ M+ KC ++ A +F+ EK VSWN M+ GY HG ++A+ F MK +P
Sbjct: 543 LINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP 602
Query: 435 DEITMVGVLSACSHAGLIDRGTEYFYSMNKD--YSVTPSSKHYTCMIDLLGRAGRLEEAQ 492
+ +T V ++ A + + G S+ + S TP ++D+ + G +E ++
Sbjct: 603 NAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNS---LVDMYAKCGMIESSE 659
Query: 493 DLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 534
+ SW +L A HG L A + M+
Sbjct: 660 KCFIEIS-NKYIVSWNTMLSAYAAHG---LASCAVSLFLSMQ 697
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 219/495 (44%), Gaps = 49/495 (9%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
N ++ Y +R +R +FDS+ VV WN+M+ GY + G EA F M + I
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 116 -----SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK 170
S+ L A + ++ R+ D ++ L S
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLES----------------------- 133
Query: 171 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 230
DV ++ Y + D+ A+ +FD+ +DV TW MVSG QNG A F
Sbjct: 134 ----DVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLF 189
Query: 231 DQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN-VSSWNT-MITGYGQNGD 284
M + +S ++ + K D+ R L + + + ++++ +I Y D
Sbjct: 190 HDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCAD 249
Query: 285 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 344
+ A +F+ + ++D SW +++ YA G +EE L +F ++ +N+ + AL
Sbjct: 250 LYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQA 309
Query: 345 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 404
A + L G IH V+ G V +L+ MY KCG + A +F IE++DVVSW
Sbjct: 310 AAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSW 369
Query: 405 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMN 463
+ MIA Y + G +A+ +F M I +KP+ +T+ VL C+ G + Y++
Sbjct: 370 SAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIK 429
Query: 464 KDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 523
D + + T +I + + GR A +P + A ++ AL G T++G
Sbjct: 430 AD--IESELETATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNAL-----AQGYTQIG 481
Query: 524 E--KAAEMVFKMEPH 536
+ KA ++ M+ H
Sbjct: 482 DANKAFDVYKNMKLH 496
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 196/365 (53%), Gaps = 15/365 (4%)
Query: 345 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 404
C + L+ K +HG++ + + LL MY CG EA VFE + EK++ +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 405 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 464
+I +A++GFG+ A+ +F K G PD G+ AC G +D G +F SM++
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 465 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 524
DY + PS + Y ++++ G L+EA + + MP EP W L+ SR+HGN ELG+
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 525 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWV--EVQN 582
AE+V ++P + + G + + DV + + S + V++
Sbjct: 444 YCAEVVEFLDP-------------TRLNKQSREGFIPVKASDVEKESLKKRSGILHGVKS 490
Query: 583 KIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEK 642
+ +F GD PE D ++ L L + M GYV+ T++ LHD+++E KE +L HSE+
Sbjct: 491 SMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSER 550
Query: 643 LAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICS 702
+A A +L +P VIKNLRVC DCHNA+K +S IVGR +I RD RFH G C+
Sbjct: 551 IAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACT 610
Query: 703 CGDYW 707
C DYW
Sbjct: 611 CKDYW 615
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/548 (29%), Positives = 268/548 (48%), Gaps = 39/548 (7%)
Query: 53 VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK 112
+ WNV++ Y+RN+R ++ ++ M K + A E Y K
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGI-----------------RADEFTYPSVIK 192
Query: 113 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH 172
+ V +G IE S L N L+ + + + AR+LFD+M
Sbjct: 193 ACAALLDFAYGRVVHGSIEV------SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEART 228
RD VSWN +I+ Y + + +A L D+ + TW + G ++ G A
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 229 FFDQMPQKN-EISYNAMVAGYVQSNKMDMAR--ELFEAMPSRNVS-------SWNTMITG 278
M N I AM+ G + + + ++F + R+ S N++IT
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM 366
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
Y + D+ A +F + +W +IISG+A EE + E+ G N T
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 339 SCALSTCADIAALELGKQIHGQVVKTGYETGCFV-GNALLGMYFKCGSIGEANDVFEGIE 397
+ L A + L+ GK+ H +++ C + N+L+ MY K G I A VF+ +
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Query: 398 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
++D V++ ++I GY R G G+ AL F+ M G+KPD +TMV VLSACSH+ L+ G
Sbjct: 487 KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHW 546
Query: 458 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIH 517
F M + + +HY+CM+DL RAG L++A+D+ +P+EP +A LL A IH
Sbjct: 547 LFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH 606
Query: 518 GNTELGEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 576
GNT +GE AA+ ++ + +P + G Y+LL+++YA +G W+ +++ + D+GVQK ++
Sbjct: 607 GNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFA 666
Query: 577 WVEVQNKI 584
+E +++
Sbjct: 667 LMETDSEL 674
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 186/413 (45%), Gaps = 50/413 (12%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQ 80
NA+IS Y R + +AR LFD+M +RD VSWN ++ Y +LG+A +L D M +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAAYVHNGRIEEACRL 136
+V+WN + G + G A M + N +++ L A H G ++
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK----- 337
Query: 137 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 196
W + ++CL ++ + D +VR N++I+ Y++ D+ A
Sbjct: 338 ------WGKV-FHCL--------VIRSCSFSHDIDNVR-----NSLITMYSRCSDLRHAF 377
Query: 197 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSN 252
+F Q + TW +++SG+ N +E +M N I+ +++ + +
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 253 KMDMARELFEAMPSRN-----VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAII 307
+ +E + R + WN+++ Y ++G+I A+++FD M +RD V++ ++I
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 308 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 367
GY + G E AL F ++ R G + T LS C+ L ++ H K +
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS---NLVREGHWLFTKMEHV 554
Query: 368 TGCFVG----NALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHG 415
G + + ++ +Y + G + +A D+F I E T++ HG
Sbjct: 555 FGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHG 607
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 149/358 (41%), Gaps = 63/358 (17%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM----PQRDLVSWNV 57
R G D A R+F+ M R +VS+NA+I+ Y + A L D+M + +V+WN
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT 290
Query: 58 MLTGYVR-----------------NRRLGDARRL--FDSMPQKDVVSW------------ 86
+ G + N R+G + + + W
Sbjct: 291 IAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSC 350
Query: 87 ----------NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL 136
N++++ Y++ A VF Q+ + +WN +++ + +N R EE L
Sbjct: 351 SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 137 FD----SKSDWELISWNCLMGGFVKRKMLGAARK----LFDKMHVRD-VVSWNTMISGYA 187
S I+ ++ F + L ++ + + +D ++ WN+++ YA
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 188 QDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNA 243
+ G++ AK +FD +D T+T+++ GY + G + A +F M + + ++ A
Sbjct: 471 KSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVA 530
Query: 244 MVAGYVQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQNGDIAQARKLFDMMP 296
+++ SN + LF M + ++ M+ Y + G + +AR +F +P
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 23/308 (7%)
Query: 314 GHYEEALNMFIEIKRDGESLNRSTFSCA--LSTCADIAALELGKQIHGQVVKTGYETGCF 371
G EA F ++ S +S A LSTC G+Q+H + +G E
Sbjct: 60 GQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 372 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 431
+ L+ Y + EA + E E + WN +I Y R+ ++++ V++ M + G
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKG 179
Query: 432 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH---YTC--MIDLLGRAG 486
++ DE T V+ AC A L+D + Y S+ SS Y C +I + R G
Sbjct: 180 IRADEFTYPSVIKAC--AALLD----FAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFG 233
Query: 487 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN 546
+++ A+ L M E A SW A++ +LGE A +++ +M ++ N
Sbjct: 234 KVDVARRLFDRMS-ERDAVSWNAIINCYT--SEEKLGE-AFKLLDRMYLSGVEASIVTWN 289
Query: 547 LYAA----SGRWADAGNMRSRMRDVGVQ--KVTGYSWVEVQNKIHKFTVGDCFHPEKDRI 600
A +G + A N MR+ V+ V + ++ + I G FH R
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 601 YAFLEELD 608
+F ++D
Sbjct: 350 CSFSHDID 357
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/548 (29%), Positives = 268/548 (48%), Gaps = 39/548 (7%)
Query: 53 VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK 112
+ WNV++ Y+RN+R ++ ++ M K + A E Y K
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGI-----------------RADEFTYPSVIK 192
Query: 113 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH 172
+ V +G IE S L N L+ + + + AR+LFD+M
Sbjct: 193 ACAALLDFAYGRVVHGSIEV------SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEART 228
RD VSWN +I+ Y + + +A L D+ + TW + G ++ G A
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 229 FFDQMPQKN-EISYNAMVAGYVQSNKMDMAR--ELFEAMPSRNVS-------SWNTMITG 278
M N I AM+ G + + + ++F + R+ S N++IT
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM 366
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
Y + D+ A +F + +W +IISG+A EE + E+ G N T
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 339 SCALSTCADIAALELGKQIHGQVVKTGYETGCFV-GNALLGMYFKCGSIGEANDVFEGIE 397
+ L A + L+ GK+ H +++ C + N+L+ MY K G I A VF+ +
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Query: 398 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
++D V++ ++I GY R G G+ AL F+ M G+KPD +TMV VLSACSH+ L+ G
Sbjct: 487 KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHW 546
Query: 458 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIH 517
F M + + +HY+CM+DL RAG L++A+D+ +P+EP +A LL A IH
Sbjct: 547 LFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH 606
Query: 518 GNTELGEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 576
GNT +GE AA+ ++ + +P + G Y+LL+++YA +G W+ +++ + D+GVQK ++
Sbjct: 607 GNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFA 666
Query: 577 WVEVQNKI 584
+E +++
Sbjct: 667 LMETDSEL 674
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 186/413 (45%), Gaps = 50/413 (12%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQ 80
NA+IS Y R + +AR LFD+M +RD VSWN ++ Y +LG+A +L D M +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAAYVHNGRIEEACRL 136
+V+WN + G + G A M + N +++ L A H G ++
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK----- 337
Query: 137 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 196
W + ++CL ++ + D +VR N++I+ Y++ D+ A
Sbjct: 338 ------WGKV-FHCL--------VIRSCSFSHDIDNVR-----NSLITMYSRCSDLRHAF 377
Query: 197 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSN 252
+F Q + TW +++SG+ N +E +M N I+ +++ + +
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 253 KMDMARELFEAMPSRN-----VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAII 307
+ +E + R + WN+++ Y ++G+I A+++FD M +RD V++ ++I
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 308 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 367
GY + G E AL F ++ R G + T LS C+ L ++ H K +
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS---NLVREGHWLFTKMEHV 554
Query: 368 TGCFVG----NALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHG 415
G + + ++ +Y + G + +A D+F I E T++ HG
Sbjct: 555 FGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHG 607
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 149/358 (41%), Gaps = 63/358 (17%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM----PQRDLVSWNV 57
R G D A R+F+ M R +VS+NA+I+ Y + A L D+M + +V+WN
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT 290
Query: 58 MLTGYVR-----------------NRRLGDARRL--FDSMPQKDVVSW------------ 86
+ G + N R+G + + + W
Sbjct: 291 IAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSC 350
Query: 87 ----------NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL 136
N++++ Y++ A VF Q+ + +WN +++ + +N R EE L
Sbjct: 351 SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 137 FD----SKSDWELISWNCLMGGFVKRKMLGAARK----LFDKMHVRD-VVSWNTMISGYA 187
S I+ ++ F + L ++ + + +D ++ WN+++ YA
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 188 QDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNA 243
+ G++ AK +FD +D T+T+++ GY + G + A +F M + + ++ A
Sbjct: 471 KSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVA 530
Query: 244 MVAGYVQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQNGDIAQARKLFDMMP 296
+++ SN + LF M + ++ M+ Y + G + +AR +F +P
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 23/308 (7%)
Query: 314 GHYEEALNMFIEIKRDGESLNRSTFSCA--LSTCADIAALELGKQIHGQVVKTGYETGCF 371
G EA F ++ S +S A LSTC G+Q+H + +G E
Sbjct: 60 GQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 372 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 431
+ L+ Y + EA + E E + WN +I Y R+ ++++ V++ M + G
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKG 179
Query: 432 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH---YTC--MIDLLGRAG 486
++ DE T V+ AC A L+D + Y S+ SS Y C +I + R G
Sbjct: 180 IRADEFTYPSVIKAC--AALLD----FAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFG 233
Query: 487 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN 546
+++ A+ L M E A SW A++ +LGE A +++ +M ++ N
Sbjct: 234 KVDVARRLFDRMS-ERDAVSWNAIINCYT--SEEKLGE-AFKLLDRMYLSGVEASIVTWN 289
Query: 547 LYAA----SGRWADAGNMRSRMRDVGVQ--KVTGYSWVEVQNKIHKFTVGDCFHPEKDRI 600
A +G + A N MR+ V+ V + ++ + I G FH R
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 601 YAFLEELD 608
+F ++D
Sbjct: 350 CSFSHDID 357
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 195/337 (57%), Gaps = 6/337 (1%)
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
Y ++ + ARK+FD +PQ D V W +++GY + G E L +F E+ G + +
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 339 SCALSTCADIAALELGKQIHGQVVKTGY-ETGCFVGNALLGMYFKCGSIGEANDVFEGIE 397
+ AL+ CA + AL GK IH V K + E+ FVG AL+ MY KCG I A +VF+ +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 398 EKDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGT 456
++V SW +I GYA +G+ K+A+ E + + G+KPD + ++GVL+AC+H G ++ G
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 457 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 516
+M Y +TP +HY+C++DL+ RAGRL++A +L+ MP +P A+ WGALL R
Sbjct: 342 SMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRT 401
Query: 517 HGNTELGEKAAEMVFKMEPHN----SGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 572
H N ELGE A + + +E N V LSN+Y + R +A +R + GV+K
Sbjct: 402 HKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKT 461
Query: 573 TGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDL 609
G+S +EV + KF GD HP +I+ + L +
Sbjct: 462 PGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSV 498
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 20/241 (8%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----N 113
+L YV ++ L DAR++FD +PQ DVV W+ +++GY + G E EVF +M K +
Sbjct: 158 VLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPD 217
Query: 114 AISWNGLLAAYVHNGRIEEA--CRLFDSKSDW---ELISWNCLMGGFVKRKMLGAARKLF 168
S L A G + + F K W ++ L+ + K + A ++F
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 169 DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGML 223
K+ R+V SW +I GYA G +A ++ + D +++ G L
Sbjct: 278 KKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFL 337
Query: 224 DEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMIT 277
+E R+ + M + EI+ Y+ +V ++ ++D A L E MP + ++S W ++
Sbjct: 338 EEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLN 397
Query: 278 G 278
G
Sbjct: 398 G 398
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 141/312 (45%), Gaps = 17/312 (5%)
Query: 267 RNVSSWNTMITGY----GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 322
RN + + ++T + N A +FD + + + +I +++ L
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 323 FI-EIKRDGESLNRS--TFSCALSTCADIAALELGKQIHGQVVKTG-YETGCFVGNALLG 378
F+ +K + E + S TF + C +GKQIH VVK G + + V +L
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 379 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
+Y + + +A VF+ I + DVV W+ ++ GY R G G + L VF M G++PDE +
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 439 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY-TCMIDLLGRAGRLEEAQDLMRN 497
+ L+AC+ G + +G ++ + K S S T ++D+ + G +E A ++ +
Sbjct: 221 VTTALTACAQVGALAQG-KWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKK 279
Query: 498 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYA-ASGRWAD 556
+ SW AL+G +G + E + + + VLL L A A G + +
Sbjct: 280 LT-RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 557 AG-----NMRSR 563
G NM +R
Sbjct: 339 EGRSMLENMEAR 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 116/257 (45%), Gaps = 22/257 (8%)
Query: 118 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR--- 174
G+L YV + + +A ++FD +++ W+ LM G+V+ + ++F +M V+
Sbjct: 156 TGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE 215
Query: 175 -DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEART 228
D S T ++ AQ G ++Q K + + + DVF TA+V Y + G ++ A
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 229 FFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMI-----TGYGQNG 283
F ++ ++N S+ A++ GY A E + + ++++ G
Sbjct: 276 VFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGG 335
Query: 284 DIAQARKLFDMMPQRDCVS-----WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
+ + R + + M R ++ ++ I+ + G ++ALN+ I++ S +
Sbjct: 336 FLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNL---IEKMPMKPLASVW 392
Query: 339 SCALSTCADIAALELGK 355
L+ C +ELG+
Sbjct: 393 GALLNGCRTHKNVELGE 409
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 103/233 (44%), Gaps = 30/233 (12%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLR----NARFSLARDLFDKMPQRDLVSWNVMLTGYVR 64
A +VF+ +P+ V ++ +++GY+R + + R++ K + D S LT +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 65 NRRLGDARRLFDSMPQK-----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG 119
L + + + + +K DV A++ YA+ G + A EVF ++ +N SW
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 120 LLAAYVHNGRIEEACRLFDSKSDWELISWN----------CLMGGFVKRKMLGAARKLFD 169
L+ Y G ++A + + I + C GGF++ R + +
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEE-----GRSMLE 345
Query: 170 KMHVRDVVS-----WNTMISGYAQDGDMSQAKNLFDQSPHQDVFT-WTAMVSG 216
M R ++ ++ ++ + G + A NL ++ P + + + W A+++G
Sbjct: 346 NMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 199/385 (51%), Gaps = 9/385 (2%)
Query: 203 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMAR 258
P F + +NG L +T Q + + + N ++ Y +D A
Sbjct: 113 PDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSAL 172
Query: 259 ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 318
+LF+ P R+V ++N +I G + +I +AR+LFD MP RD VSW ++ISGYAQ H E
Sbjct: 173 QLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCRE 232
Query: 319 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 378
A+ +F E+ G + LS CA + GK IH + F+ L+
Sbjct: 233 AIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVD 292
Query: 379 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
Y KCG I A ++FE +K + +WN MI G A HG G+ + F M + G+KPD +T
Sbjct: 293 FYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVT 352
Query: 439 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
+ VL CSH+GL+D F M Y V KHY CM DLLGRAG +EEA +++ M
Sbjct: 353 FISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQM 412
Query: 499 PFE----PPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRW 554
P + +W LLG RIHGN E+ EKAA V + P + G+Y ++ +YA + RW
Sbjct: 413 PKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERW 472
Query: 555 ADAGNMRSRM-RDVGVQKVTGYSWV 578
+ +R + RD V+K G+S V
Sbjct: 473 EEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 166/348 (47%), Gaps = 29/348 (8%)
Query: 23 SYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD 82
+ N +I Y A A LFD+ PQRD+V++NV++ G V+ R + AR LFDSMP +D
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRD 213
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLAAYVHNGRIEEACRL 136
+VSWN+++SGYAQ + EA ++F +M P AI L+A +G ++ +
Sbjct: 214 LVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIV--STLSACAQSGDWQKGKAI 271
Query: 137 FDSKSDWELISWNCLMGGFV----KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD- 191
D L + L G V K + A ++F+ + + +WN MI+G A G+
Sbjct: 272 HDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNG 331
Query: 192 ---MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNA 243
+ + + D T+ +++ G +G++DEAR FDQM +++ Y
Sbjct: 332 ELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGC 391
Query: 244 MVAGYVQSNKMDMARELFEAMPS-----RNVSSWNTMITGYGQNGDIAQARKLFD---MM 295
M ++ ++ A E+ E MP + +W+ ++ G +G+I A K + +
Sbjct: 392 MADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKAL 451
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 343
D + ++ YA +EE + + I RD + FS LS
Sbjct: 452 SPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKVLS 499
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 132/308 (42%), Gaps = 49/308 (15%)
Query: 36 RFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 95
RF L DLF + N ++ Y + A +LFD PQ+DVV++N ++ G +
Sbjct: 145 RFGLLSDLF---------TLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVK 195
Query: 96 NGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGF 155
ARE+F MP ++ +SWN L++ Y EA +LFD
Sbjct: 196 AREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFD----------------- 238
Query: 156 VKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWT 211
+M+ K D V+ + +S AQ GD + K + D + + D F T
Sbjct: 239 ---EMVALGLK-------PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLAT 288
Query: 212 AMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS- 270
+V Y + G +D A F+ K ++NAM+ G ++ + F M S +
Sbjct: 289 GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKP 348
Query: 271 ---SWNTMITGYGQNGDIAQARKLFDMM-----PQRDCVSWAAIISGYAQTGHYEEALNM 322
++ +++ G +G + +AR LFD M R+ + + + G EEA M
Sbjct: 349 DGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEM 408
Query: 323 FIEIKRDG 330
++ +DG
Sbjct: 409 IEQMPKDG 416
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 26/292 (8%)
Query: 144 ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP 203
+L + N L+ + + +A +LFD+ RDVV++N +I G + ++ +A+ LFD P
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 204 HQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARE 259
+D+ +W +++SGY Q EA FD+M + + ++ + ++ QS +
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 260 LFEAMPSRNVSSWNTMITG----YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 315
+ + + + + + TG Y + G I A ++F++ + +W A+I+G A G+
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
Query: 316 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET------- 368
E ++ F ++ G + TF L C+ ++ + + Q +++ Y+
Sbjct: 331 GELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQ-MRSLYDVNREMKHY 389
Query: 369 GCFVGNALLGMYFKCGSIGEANDVFE-----GIEEKDVVSWNTMIAGYARHG 415
GC LLG + G I EA ++ E G + +++W+ ++ G HG
Sbjct: 390 GCMAD--LLG---RAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHG 436
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 14/144 (9%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVML 59
G D+A+ +F ++ ++NAMI+G + L D F KM + D V++ +L
Sbjct: 298 GFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVL 357
Query: 60 TGYVRNRRLGDARRLFDSM-----PQKDVVSWNAMLSGYAQNGYADEAREVFYQMP---- 110
G + + +AR LFD M +++ + M + G +EA E+ QMP
Sbjct: 358 VGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGG 417
Query: 111 -HKNAISWNGLLAAYVHNGRIEEA 133
+ ++W+GLL +G IE A
Sbjct: 418 NREKLLAWSGLLGGCRIHGNIEIA 441
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 219/404 (54%), Gaps = 18/404 (4%)
Query: 206 DVFTWTAMVSGYVQNGMLDEARTFFDQ---------MPQKNEISYNAMVAGYVQSNKMDM 256
D +T+ +++S + +D + Q +P +N + + Y +D+
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHM-----YTCCGALDL 171
Query: 257 ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHY 316
A++LF +P R++ SWN++I G +NGD+ A KLFD MP ++ +SW +IS Y +
Sbjct: 172 AKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNP 231
Query: 317 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 376
++++F E+ R G N ST L+ C A L+ G+ +H +++T + + AL
Sbjct: 232 GVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTAL 291
Query: 377 LGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDE 436
+ MY KC +G A +F+ + ++ V+WN MI + HG + L +FE+M ++PDE
Sbjct: 292 IDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDE 351
Query: 437 ITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMR 496
+T VGVL C+ AGL+ +G Y+ M ++ + P+ H CM +L AG EEA++ ++
Sbjct: 352 VTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALK 411
Query: 497 NMPFE---PPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGR 553
N+P E P + W LL +SR GN LGE A+ + + +P N Y LL N+Y+ +GR
Sbjct: 412 NLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGR 471
Query: 554 WADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEK 597
W D +R +++ + ++ G V+++ +H +G C EK
Sbjct: 472 WEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG-CKEAEK 514
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 150/319 (47%), Gaps = 24/319 (7%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
N+++ Y LA+ LF ++P+RD+VSWN ++ G VRN + A +LFD MP K+++
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEA----CRL 136
SWN M+S Y + +F +M N + LL A + R++E L
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 137 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 196
+ + ++ L+ + K K +G AR++FD + +R+ V+WN MI + G
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 197 NLFDQSPH----QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYN-----AMVAG 247
LF+ + D T+ ++ G + G++ + ++++ M + +I N M
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANL 396
Query: 248 YVQSNKMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 303
Y + + A E + +P +V+ W +++ G+ + + + D +++
Sbjct: 397 YSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNY 456
Query: 304 A---AIISGYAQTGHYEEA 319
+++ Y+ TG +E+
Sbjct: 457 KYYHLLMNIYSVTGRWEDV 475
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 270 SSWNT-MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 328
SSW ++ + GD + ++ + + C + + Y + ++AL + +I R
Sbjct: 54 SSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCAN--PVFKAYLVSSSPKQALGFYFDILR 111
Query: 329 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 388
G + TF +S ++ GK HGQ +K G + V N+L+ MY CG++
Sbjct: 112 FGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDL 171
Query: 389 ANDVFEGIEEKDVVSWNTMIAGYARHG---------------------------FGKQ-- 419
A +F I ++D+VSWN++IAG R+G G
Sbjct: 172 AKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNP 231
Query: 420 --ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC 477
++ +F M G + +E T+V +L+AC + + G S+ + + + S T
Sbjct: 232 GVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF-LNSSVVIDTA 290
Query: 478 MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 528
+ID+ G+ + A+ + ++ +W ++ A +HG E G + E
Sbjct: 291 LIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMILAHCLHGRPEGGLELFE 340
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 144/321 (44%), Gaps = 28/321 (8%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G D A ++F +P+R VS+N++I+G +RN A LFD+MP ++++SWN+M++ Y+
Sbjct: 167 GALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYL 226
Query: 64 RNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAI 115
G + LF M Q + + +L+ ++ E R V + + + +
Sbjct: 227 GANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVV 286
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM---H 172
L+ Y + A R+FDS S ++WN ++ +LF+ M
Sbjct: 287 IDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM 346
Query: 173 VR-DVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVF--TWTAMVSGYVQNGMLDE 225
+R D V++ ++ G A+ G +SQ ++ + D+ + F W M + Y G +E
Sbjct: 347 LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQW-CMANLYSSAGFPEE 405
Query: 226 ARTFFDQMPQKNEISYNAMVAGYVQSNKM--------DMARELFEAMPSRNVSSWNTMIT 277
A +P ++ + A + S++ +A+ L E P N ++ ++
Sbjct: 406 AEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP-LNYKYYHLLMN 464
Query: 278 GYGQNGDIAQARKLFDMMPQR 298
Y G ++ +M+ +R
Sbjct: 465 IYSVTGRWEDVNRVREMVKER 485
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/529 (28%), Positives = 260/529 (49%), Gaps = 40/529 (7%)
Query: 62 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLL 121
Y N L AR+LFD P++ V WN+++ YA+ +F Q+
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRS--------- 100
Query: 122 AAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVV 177
D++ D ++ CL GF + R + V D +
Sbjct: 101 ----------------DTRPDN--FTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 178 SWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP--- 234
+ ++ Y++ G + +A LF P D+ W M+ GY G D+ F+ M
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 235 -QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN----TMITGYGQNGDIAQAR 289
Q N + A+ +G + + + +A + N+ S + ++ Y + IA A
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
+F+ + + D V+ +++I+GY++ G+++EAL++F E++ G+ + + L +CA+++
Sbjct: 263 SVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELS 322
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 409
GK++H V++ G E V +AL+ MY KCG + A +F GI EK++VS+N++I
Sbjct: 323 DSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLIL 382
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 469
G HGF A F + +G+ PDEIT +L C H+GL+++G E F M ++ +
Sbjct: 383 GLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIE 442
Query: 470 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 529
P ++HY M+ L+G AG+LEEA + + ++ + GALL +H NT L E AE
Sbjct: 443 PQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAEN 502
Query: 530 VFKMEPHNSGMY-VLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSW 577
+ K +Y V+LSN+YA GRW + +R + + K+ G SW
Sbjct: 503 IHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 166/383 (43%), Gaps = 63/383 (16%)
Query: 8 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL--------------- 52
SA ++F+ P RS +N++I Y + +F+ LF ++ + D
Sbjct: 58 SARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFS 117
Query: 53 ------------------------VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNA 88
+ + ++ Y + + +A +LF S+P D+ WN
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 89 MLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL-------FDSKS 141
M+ GY G+ D+ +F M H+ N + +G I+ + L F K
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGH-QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKI 236
Query: 142 DWELISW-NCLMGGFVKRKM-LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 199
+ + S+ C + R M + +A +F+ + D+V+ +++I+GY++ G+ +A +LF
Sbjct: 237 NLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLF 296
Query: 200 DQ---SPHQDVFTWTAMVSGYVQNGMLD-----EARTFFDQMPQKNEISY-NAMVAGYVQ 250
+ S + A+V G + D E ++ ++ + +I +A++ Y +
Sbjct: 297 AELRMSGKKPDCVLVAIVLGSCAE-LSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSK 355
Query: 251 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAI 306
+ A LF +P +N+ S+N++I G G +G + A ++ +M D ++++A+
Sbjct: 356 CGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSAL 415
Query: 307 ISGYAQTGHYEEALNMFIEIKRD 329
+ +G + +F +K +
Sbjct: 416 LCTCCHSGLLNKGQEIFERMKSE 438
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 163/401 (40%), Gaps = 32/401 (7%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP----Q 80
+A++ Y + A LF +P DL WNVM+ GY LF+ M Q
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 81 KDVVSWNAMLSGYAQNGYADEAREV--FYQMPHKNAISWNG--LLAAYVHNGRIEEACRL 136
+ + A+ SG A V F + ++ S+ G L+ Y I AC +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 137 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDM 192
F+S S+ +L++ + L+ G+ + A LF ++ + D V ++ A+ D
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 193 SQAKN----LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGY 248
K + D+ +A++ Y + G+L A + F +P+KN +S+N+++ G
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Query: 249 ----VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM-------PQ 297
S + E+ E + +++ ++ +G + + +++F+ M PQ
Sbjct: 385 GLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
Query: 298 RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI 357
+ + + G A G EEA + +++ ++ LS C L + +
Sbjct: 445 TEHYVYMVKLMGMA--GKLEEAFEFVMSLQK---PIDSGILGALLSCCEVHENTHLAEVV 499
Query: 358 HGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE 398
+ K G E L +Y + G E + +GI E
Sbjct: 500 AENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISE 540
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 211/416 (50%), Gaps = 17/416 (4%)
Query: 176 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
++S +S YA G+ QA NLF Q A V R
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 236 KNEISYNAMVAGYVQSNKMDM---------ARELFEAMPSRNVSSWNTMITGYGQNGDIA 286
+ + N + +V +DM AR+LF+ +P RN WN MI+ Y G +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 287 QARKLF---DMMPQRDCVSWAAIISGYAQT--GHYEEALNMFIEIKRDGESLNRSTFSCA 341
+A +L+ D+MP S+ AII G T G Y A+ + ++ N T
Sbjct: 132 EAVELYEAMDVMPNES--SFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLAL 188
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
+S C+ I A L K+IH + E + + L+ Y +CGSI VF+ +E++DV
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDV 248
Query: 402 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYS 461
V+W+++I+ YA HG + AL F+ M+ V PD+I + VL ACSHAGL D YF
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKR 308
Query: 462 MNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 521
M DY + S HY+C++D+L R GR EEA +++ MP +P A +WGALLGA R +G E
Sbjct: 309 MQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIE 368
Query: 522 LGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSW 577
L E AA + +EP N YVLL +Y + GR +A +R +M++ GV+ G SW
Sbjct: 369 LAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 143/338 (42%), Gaps = 56/338 (16%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP-HKNAIS 116
+L Y + + AR+LFD +PQ++ V WNAM+S Y G EA E++ M N S
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESS 148
Query: 117 WNGLLAAYV--HNGR---IEEACRLFDSKSDWELISWNCL------MGGF--VKRKMLGA 163
+N ++ V +G IE ++ + + LI+ L +G F +K A
Sbjct: 149 FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 164 ARKL---------------------------FDKMHVRDVVSWNTMISGYAQDGDMSQAK 196
R L FD M RDVV+W+++IS YA GD A
Sbjct: 209 FRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESAL 268
Query: 197 NLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP-----QKNEISYNAMVAG 247
F + D + ++ G+ DEA +F +M + ++ Y+ +V
Sbjct: 269 KTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDV 328
Query: 248 YVQSNKMDMARELFEAMPSRNVS-SWNTMITGYGQNGDI----AQARKLFDMMPQRDCVS 302
+ + + A ++ +AMP + + +W ++ G+I AR+L + P+ +
Sbjct: 329 LSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENP-AN 387
Query: 303 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 340
+ + Y G EEA + +++K G ++ + C
Sbjct: 388 YVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWC 425
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 120/276 (43%), Gaps = 38/276 (13%)
Query: 88 AMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE-LI 146
A+L Y + AR++F ++P +NA+ WN +++ Y H G+++EA L+++
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 147 SWNCLMGGFV-----KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 201
S+N ++ G V + + RK+ + ++++ ++S + G K +
Sbjct: 148 SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEI--- 204
Query: 202 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELF 261
H F R + PQ + +V Y + + + +F
Sbjct: 205 --HSYAF------------------RNLIEPHPQLK----SGLVEAYGRCGSIVYVQLVF 240
Query: 262 EAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYE 317
++M R+V +W+++I+ Y +GD A K F M D +++ ++ + G +
Sbjct: 241 DSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLAD 300
Query: 318 EALNMFIEIKRD-GESLNRSTFSCALSTCADIAALE 352
EAL F ++ D G ++ +SC + + + E
Sbjct: 301 EALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFE 336
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 232/448 (51%), Gaps = 14/448 (3%)
Query: 176 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
++S +S + D++ A+ L S TW + GY + E+ + +M +
Sbjct: 47 IISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKR 106
Query: 236 K----NEISYNAMVAGYVQSNKMDMAR----ELFEAMPSRNVSSWNTMITGYGQNGDIAQ 287
+ N++++ ++ + R E+ + +V N +I YG +
Sbjct: 107 RGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSD 166
Query: 288 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 347
ARK+FD M +R+ VSW +I++ + G F E+ + +T LS C
Sbjct: 167 ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG- 225
Query: 348 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 407
L LGK +H QV+ E C +G AL+ MY K G + A VFE + +K+V +W+ M
Sbjct: 226 -GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAM 284
Query: 408 IAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 466
I G A++GF ++AL +F M K V+P+ +T +GVL ACSH GL+D G +YF+ M K +
Sbjct: 285 IVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIH 344
Query: 467 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE---LG 523
+ P HY M+D+LGRAGRL EA D ++ MPFEP A W LL A IH + + +G
Sbjct: 345 KIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIG 404
Query: 524 EKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNK 583
EK + + ++EP SG V+++N +A + WA+A +R M++ ++K+ G S +E+
Sbjct: 405 EKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGS 464
Query: 584 IHKFTVGDCFHPEKDRIYAFLEELDLKM 611
H+F G E IY L+ ++
Sbjct: 465 FHRFFSGYDPRSEYVSIYELLDLFKFQL 492
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 132/275 (48%), Gaps = 30/275 (10%)
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 110
D+ N ++ Y ++ DAR++FD M +++VVSWN++++ +NG + E F +M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 111 HK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG-----FVKRKML 161
K + + LL+A N + +L S+ + NC +G + K L
Sbjct: 207 GKRFCPDETTMVVLLSACGGNLSLG---KLVHSQVMVRELELNCRLGTALVDMYAKSGGL 263
Query: 162 GAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVSG 216
AR +F++M ++V +W+ MI G AQ G +A LF + S + T+ ++
Sbjct: 264 EYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCA 323
Query: 217 YVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMP-SRNVS 270
G++D+ +F +M + ++I Y AMV ++ +++ A + + MP +
Sbjct: 324 CSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAV 383
Query: 271 SWNTMITGYGQNGD-----IAQ--ARKLFDMMPQR 298
W T+++ + D I + ++L ++ P+R
Sbjct: 384 VWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKR 418
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 143/323 (44%), Gaps = 48/323 (14%)
Query: 27 MISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSW 86
+IS +R + SLA+DL + R L + DS P +W
Sbjct: 47 IISELVRVSSLSLAKDL-----------------AFARTLLLHSS----DSTPS----TW 81
Query: 87 NAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAY-----VHNGRIEEACRLF 137
N + GY+ + E+ V+ +M + N +++ LL A + GR + +
Sbjct: 82 NMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGR-QIQVEVL 140
Query: 138 DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKN 197
D+++ N L+ + K ARK+FD+M R+VVSWN++++ ++G ++
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE 200
Query: 198 LFDQSPHQ----DVFTWTAMVS---GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQ 250
F + + D T ++S G + G L ++ ++ + A+V Y +
Sbjct: 201 CFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLG-TALVDMYAK 259
Query: 251 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC-----VSWAA 305
S ++ AR +FE M +NV +W+ MI G Q G +A +LF M + V++
Sbjct: 260 SGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLG 319
Query: 306 IISGYAQTGHYEEALNMFIEIKR 328
++ + TG ++ F E+++
Sbjct: 320 VLCACSHTGLVDDGYKYFHEMEK 342
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 48/225 (21%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR------------------ 50
A +VF+ M R+ VS+N++++ + N + +L + F +M +
Sbjct: 167 ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG 226
Query: 51 -----DLVSWNVMLTGYVRNRRLGD--------------ARRLFDSMPQKDVVSWNAMLS 91
LV VM+ N RLG AR +F+ M K+V +W+AM+
Sbjct: 227 NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIV 286
Query: 92 GYAQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFDS-----KS 141
G AQ G+A+EA ++F +M + N +++ G+L A H G +++ + F K
Sbjct: 287 GLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKI 346
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISG 185
+I + ++ + L A KM D V W T++S
Sbjct: 347 KPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 194/337 (57%), Gaps = 6/337 (1%)
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
Y ++ + ARK+FD +PQ D V W +++GY + G E L +F E+ G + +
Sbjct: 162 YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSV 221
Query: 339 SCALSTCADIAALELGKQIHGQVVKTGY-ETGCFVGNALLGMYFKCGSIGEANDVFEGIE 397
+ AL+ CA + AL GK IH V K + E+ FVG AL+ MY KCG I A +VFE +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT 281
Query: 398 EKDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGT 456
++V SW +I GYA +G+ K+A + + + G+KPD + ++GVL+AC+H G ++ G
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 457 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 516
+M Y +TP +HY+C++DL+ RAGRL++A DL+ MP +P A+ WGALL R
Sbjct: 342 TMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRT 401
Query: 517 HGNTELGEKAAEMVFKMEPHN----SGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 572
H N ELGE A + + +E N V LSN+Y + R +A +R + G++K
Sbjct: 402 HKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKT 461
Query: 573 TGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDL 609
G+S +EV + KF GD HP +I+ + L +
Sbjct: 462 PGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSV 498
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 20/241 (8%)
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKN 113
+L YV ++ L DAR++FD +PQ DVV W+ +++GY + G E EVF +M +
Sbjct: 158 VLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPD 217
Query: 114 AISWNGLLAAYVHNGRIEEA--CRLFDSKSDW---ELISWNCLMGGFVKRKMLGAARKLF 168
S L A G + + F K W ++ L+ + K + A ++F
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 169 DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGML 223
+K+ R+V SW +I GYA G +A D+ + D +++ G L
Sbjct: 278 EKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFL 337
Query: 224 DEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMIT 277
+E RT + M + I+ Y+ +V ++ ++D A +L E MP + ++S W ++
Sbjct: 338 EEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLN 397
Query: 278 G 278
G
Sbjct: 398 G 398
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 15/311 (4%)
Query: 267 RNVSSWNTMITGY----GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 322
RN + + ++T + N A +FD + + + +I +++ L
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 323 FI-EIKRDGESLNRS--TFSCALSTCADIAALELGKQIHGQVVKTG-YETGCFVGNALLG 378
F+ +K + E + S TF + C +GKQIH VVK G + + V +L
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 379 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
+Y + + +A VF+ I + DVV W+ ++ GY R G G + L VF+ M G++PDE +
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFS 220
Query: 439 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
+ L+AC+ G + +G + K + T ++D+ + G +E A ++ +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 499 PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYA-ASGRWADA 557
SW AL+G +G + + + + + VLL L A A G + +
Sbjct: 281 T-RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEE 339
Query: 558 G-----NMRSR 563
G NM +R
Sbjct: 340 GRTMLENMEAR 350
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 117/257 (45%), Gaps = 22/257 (8%)
Query: 118 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR--- 174
G+L YV + + +A ++FD +++ W+ LM G+V+ + ++F +M VR
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 175 -DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEART 228
D S T ++ AQ G ++Q K + + + DVF TA+V Y + G ++ A
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 229 FFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMI-----TGYGQNG 283
F+++ ++N S+ A++ GY A + + + ++++ G
Sbjct: 276 VFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGG 335
Query: 284 DIAQARKLFDMMPQRDCVS-----WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
+ + R + + M R ++ ++ I+ + G ++AL++ I++ S +
Sbjct: 336 FLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDL---IEKMPMKPLASVW 392
Query: 339 SCALSTCADIAALELGK 355
L+ C +ELG+
Sbjct: 393 GALLNGCRTHKNVELGE 409
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 103/233 (44%), Gaps = 30/233 (12%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVR 64
A +VF+ +P+ V ++ +++GY+R S ++F +M R D S LT +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 65 NRRLGDARRLFDSMPQK-----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNG 119
L + + + + +K DV A++ YA+ G + A EVF ++ +N SW
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 120 LLAAYVHNGRIEEACRLFDSKSDWELISWN----------CLMGGFVKRKMLGAARKLFD 169
L+ Y G ++A D + I + C GGF++ R + +
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEE-----GRTMLE 345
Query: 170 KMHVRDVVS-----WNTMISGYAQDGDMSQAKNLFDQSPHQDVFT-WTAMVSG 216
M R ++ ++ ++ + G + A +L ++ P + + + W A+++G
Sbjct: 346 NMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 193/342 (56%), Gaps = 5/342 (1%)
Query: 242 NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCV 301
A+V Y+ M A ++F+ MP RN +WN MITG GD +A + MP R V
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 302 SWAAIISGYAQTGHYEEALNMFIE-IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 360
SW II GYA+ +EA+ +F + D N T L ++ L++ +H
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 361 VVKTGY-ETGCFVGNALLGMYFKCGSIGEANDVFEGIE--EKDVVSWNTMIAGYARHGFG 417
V K G+ V N+L+ Y KCG I A F I K++VSW TMI+ +A HG G
Sbjct: 282 VGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMG 341
Query: 418 KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG-TEYFYSMNKDYSVTPSSKHYT 476
K+A+ +F+ M+ +G+KP+ +TM+ VL+ACSH GL + E+F +M +Y +TP KHY
Sbjct: 342 KEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYG 401
Query: 477 CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 536
C++D+L R GRLEEA+ + +P E A W LLGA ++ + EL E+ + ++E
Sbjct: 402 CLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERS 461
Query: 537 NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWV 578
+ G YVL+SN++ +GR+ DA R +M GV K+ G+S V
Sbjct: 462 HGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 154/369 (41%), Gaps = 62/369 (16%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
A++ YL A +FD+MP+R+ V+WNVM+TG A + MP + VV
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 144
SW ++ GYA+ EA +F +M +AI N + +
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPA---------------- 265
Query: 145 LISWNCLMGGFVKRKMLGAARKLFDKMHVR--DVVSWNTMISGYAQDGDMSQAKNLFDQS 202
WN +G KM G+ K D+ N++I YA+ G + A F +
Sbjct: 266 --VWN--LGDL---KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEI 318
Query: 203 PH--QDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDM 256
P+ +++ +WT M+S + +GM EA + F M + N ++ M++ + +
Sbjct: 319 PNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVT---MISVLNACSHGGL 375
Query: 257 ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHY 316
A E F + +NTM+ Y D+ L DM+ ++ G
Sbjct: 376 AEEEF-------LEFFNTMVNEYKITPDVKHYGCLVDMLRRK---------------GRL 413
Query: 317 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 376
EEA + +EI + +++ + L C+ EL +++ ++++ G G+ +
Sbjct: 414 EEAEKIALEIPIEEKAV---VWRMLLGACSVYDDAELAERVTRKLMELERSHG---GDYV 467
Query: 377 LGMYFKCGS 385
L CG+
Sbjct: 468 LMSNIFCGT 476
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 53/256 (20%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G+ A +VF+ MP R+ V++N MI+G F A +KMP R +VSW ++ GY
Sbjct: 172 GNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYA 231
Query: 64 RNRRLGDARRLFDSMPQKDVVS-------------W------------------------ 86
R + +A LF M D + W
Sbjct: 232 RVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD 291
Query: 87 ----NAMLSGYAQNGYADEAREVFYQMPH--KNAISWNGLLAAYVHNGRIEEACRLFDSK 140
N+++ YA+ G A + F ++P+ KN +SW +++A+ +G +EA +F
Sbjct: 292 IRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM 351
Query: 141 SDWEL---------ISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDG 190
L + C GG + + L + ++ + DV + ++ + G
Sbjct: 352 ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKG 411
Query: 191 DMSQAKNLFDQSPHQD 206
+ +A+ + + P ++
Sbjct: 412 RLEEAEKIALEIPIEE 427
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 36/205 (17%)
Query: 363 KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA------------- 409
K G+E+ +V AL+GMY G++ +A+ VF+ + E++ V+WN MI
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 410 ------------------GYARHGFGKQALMVFESMKTI-GVKPDEITMVGVLSACSHAG 450
GYAR K+A+++F M +KP+EIT++ +L A + G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 451 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF-EPPAASWGA 509
+ + K V + +ID + G ++ A +P SW
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 510 LLGASRIHGNTELGEKAAEMVFKME 534
++ A IHG +G++A M ME
Sbjct: 331 MISAFAIHG---MGKEAVSMFKDME 352
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 215/398 (54%), Gaps = 13/398 (3%)
Query: 190 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN-GMLDEARTFFDQMPQ---KNEISYNAMV 245
GD+ +++ + DQ P F W ++ Y+++ LD + + + + S ++
Sbjct: 68 GDIFRSR-ILDQYP--IAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI 124
Query: 246 AGYVQSNKMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCV 301
VQ + + +EL + IT Y + G+ ARK+FD P+R
Sbjct: 125 KAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLG 184
Query: 302 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 361
SW AII G G EA+ MF+++KR G + T ++C + L L Q+H V
Sbjct: 185 SWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCV 244
Query: 362 V--KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQ 419
+ KT ++ + N+L+ MY KCG + A+ +FE + +++VVSW++MI GYA +G +
Sbjct: 245 LQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLE 304
Query: 420 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 479
AL F M+ GV+P++IT VGVLSAC H GL++ G YF M ++ + P HY C++
Sbjct: 305 ALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIV 364
Query: 480 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 539
DLL R G+L+EA+ ++ MP +P WG L+G G+ E+ E A + ++EP N G
Sbjct: 365 DLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDG 424
Query: 540 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSW 577
+YV+L+N+YA G W D +R M+ V K+ YS+
Sbjct: 425 VYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 35/290 (12%)
Query: 59 LTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----- 113
+T Y + +AR++FD P++ + SWNA++ G G A+EA E+F M
Sbjct: 159 ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD 218
Query: 114 ------AISWNGL----LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGA 163
S GL LA +H ++ + KSD ++ N L+ + K +
Sbjct: 219 FTMVSVTASCGGLGDLSLAFQLHKCVLQAKT---EEKSD--IMMLNSLIDMYGKCGRMDL 273
Query: 164 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQ 219
A +F++M R+VVSW++MI GYA +G+ +A F Q V T+ ++S V
Sbjct: 274 ASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVH 333
Query: 220 NGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWN 273
G+++E +T+F M + E+ Y +V + ++ A+++ E MP + NV W
Sbjct: 334 GGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWG 393
Query: 274 TMITGYGQNGDIAQAR----KLFDMMPQRDCVSWAAIISGYAQTGHYEEA 319
++ G + GD+ A + ++ P D V + + + YA G +++
Sbjct: 394 CLMGGCEKFGDVEMAEWVAPYMVELEPWNDGV-YVVLANVYALRGMWKDV 442
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 51/246 (20%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP------------- 48
+ G ++A +VF+ P R S+NA+I G R + A ++F M
Sbjct: 164 KAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVS 223
Query: 49 ----------------------------QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ 80
+ D++ N ++ Y + R+ A +F+ M Q
Sbjct: 224 VTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQ 283
Query: 81 KDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRL 136
++VVSW++M+ GYA NG EA E F QM N I++ G+L+A VH G +EE
Sbjct: 284 RNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTY 343
Query: 137 FD-SKSDWELIS----WNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDG 190
F KS++EL + C++ + L A+K+ ++M ++ +V+ W ++ G + G
Sbjct: 344 FAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Query: 191 DMSQAK 196
D+ A+
Sbjct: 404 DVEMAE 409
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 231/411 (56%), Gaps = 13/411 (3%)
Query: 179 WNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMP 234
+NT+I Y G+ + LF V T+ +++ + + Q
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 235 QK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARK 290
++ + + V Y + ++ +R++F+ + + V + N+++ G+NG++ A +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 291 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL---NRSTFSCALSTCA- 346
F MP D VSW +I+G+++ G + +AL +F E+ ++ ++ N +TF LS+CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 347 -DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWN 405
D + LGKQIHG V+ +G ALL MY K G + A +F+ I +K V +WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 406 TMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKD 465
+I+ A +G KQAL +FE MK+ V P+ IT++ +L+AC+ + L+D G + F S+ +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 466 YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEK 525
Y + P+S+HY C++DL+GRAG L +A + ++++PFEP A+ GALLGA +IH NTELG
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 526 AAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 576
+ + ++P + G YV LS A W++A MR M + G++K+ YS
Sbjct: 414 VGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 161 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN 220
L ++RK+FD + VV+ N+++ ++G+M A F + P DV +WT +++G+ +
Sbjct: 137 LESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKK 196
Query: 221 GMLDEARTFFDQMPQK-------NEISYNAMVAGYVQSNK--MDMARELFEAMPSRNVSS 271
G+ +A F +M Q NE ++ ++++ ++ + + +++ + S+ +
Sbjct: 197 GLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIIL 256
Query: 272 WNTMITG----YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
T+ T YG+ GD+ A +FD + + +W AIIS A G ++AL MF +K
Sbjct: 257 TTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMK 316
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHG------QVVKTGYETGCFV 372
N T L+ CA ++LG Q+ +++ T GC V
Sbjct: 317 SSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVV 367
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 27/266 (10%)
Query: 40 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 99
+R +FD + +V+ N +L RN + A F MP DVVSW +++G+++ G
Sbjct: 140 SRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLH 199
Query: 100 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRK 159
+A VF +M A +V + +C FD I + G+V K
Sbjct: 200 AKALMVFGEMIQNERAVITPNEATFV---SVLSSCANFDQGG----IRLGKQIHGYVMSK 252
Query: 160 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 219
+ + ++ Y + GD+ A +FDQ + V W A++S
Sbjct: 253 EI-----------ILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALAS 301
Query: 220 NGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVS 270
NG +A F+ M N I+ A++ +S +D+ +LF ++ S
Sbjct: 302 NGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSE 361
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMP 296
+ ++ G+ G + A +P
Sbjct: 362 HYGCVVDLIGRAGLLVDAANFIQSLP 387
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 134/330 (40%), Gaps = 50/330 (15%)
Query: 19 RSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
++ YN +I YL + + LF M L +V+ L F S+
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHM-----------LASHVQPNNLT-----FPSL 92
Query: 79 PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAA-----YVHNGRIEEA 133
+ S++ G A +G A K W+ + Y G +E +
Sbjct: 93 IKAACSSFSVSY-GVALHGQA-----------LKRGFLWDPFVQTSFVRFYGEVGDLESS 140
Query: 134 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 193
++FD + +++ N L+ + + A + F +M V DVVSW T+I+G+++ G +
Sbjct: 141 RKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHA 200
Query: 194 QAKNLFDQ---------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAM 244
+A +F + +P++ F G + + + K I +
Sbjct: 201 KALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTL 260
Query: 245 VAG----YVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR-- 298
Y ++ ++MA +F+ + + V +WN +I+ NG QA ++F+MM
Sbjct: 261 GTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYV 320
Query: 299 --DCVSWAAIISGYAQTGHYEEALNMFIEI 326
+ ++ AI++ A++ + + +F I
Sbjct: 321 HPNGITLLAILTACARSKLVDLGIQLFSSI 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 49/194 (25%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ--RDLVSWN--- 56
RNG D A F MP VS+ +I+G+ + + A +F +M Q R +++ N
Sbjct: 164 RNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEAT 223
Query: 57 -------------------VMLTGYVRNRRL-----------------GD---ARRLFDS 77
+ GYV ++ + GD A +FD
Sbjct: 224 FVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQ 283
Query: 78 MPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEA 133
+ K V +WNA++S A NG +A E+F M H N I+ +L A + ++
Sbjct: 284 IRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
Query: 134 CRLFDSK-SDWELI 146
+LF S S++++I
Sbjct: 344 IQLFSSICSEYKII 357
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 44/179 (24%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G +S+ ++F+ + V+ N+++ RN A + F +MP D+VSW ++ G+
Sbjct: 135 GDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFS 194
Query: 64 RNRRLGDARRLFDSMPQKD--VVSWN-----AMLSG------------------------ 92
+ A +F M Q + V++ N ++LS
Sbjct: 195 KKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEI 254
Query: 93 -------------YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD 138
Y + G + A +F Q+ K +WN +++A NGR ++A +F+
Sbjct: 255 ILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFE 313
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 224/402 (55%), Gaps = 17/402 (4%)
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQD--VFTWTAMVSGYVQNGMLDEARTFFDQM---- 233
+ ++ YA G A +FD+ +D F W +++SGY + G ++A + QM
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 234 --PQKNEISYNAMVAGYVQSNKMDMA--RELFEAMPSRNVSSWNTMITGYGQNGDIAQAR 289
P + G + S ++ A R+L + +V N ++ Y + GDI +AR
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
+FDM+P +D VSW ++++GY G EAL++F + ++G ++ S S A +
Sbjct: 251 NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS---SVLARVL 307
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 409
+ + G+Q+HG V++ G E V NAL+ +Y K G +G+A +F+ + E+D VSWN +I+
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 469
++++ G L FE M KPD IT V VLS C++ G+++ G F M+K+Y +
Sbjct: 368 AHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGID 424
Query: 470 PSSKHYTCMIDLLGRAGRLEEAQDLM-RNMPFEPPAASWGALLGASRIHGNTELGEKAAE 528
P +HY CM++L GRAG +EEA ++ + M E WGALL A +HGNT++GE AA+
Sbjct: 425 PKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQ 484
Query: 529 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
+F++EP N + LL +Y+ + R D +R M D G++
Sbjct: 485 RLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 154/308 (50%), Gaps = 27/308 (8%)
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC--VSWAAIISGYAQTGHYEEALNMFIE 325
N+ + ++ Y G A ++FD M +RD +W ++ISGYA+ G YE+A+ ++ +
Sbjct: 126 NLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ 185
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 385
+ DG +R TF L C I ++++G+ IH +VK G+ +V NAL+ MY KCG
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGD 245
Query: 386 IGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 445
I +A +VF+ I KD VSWN+M+ GY HG +AL +F M G++PD++ + VL+
Sbjct: 246 IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLAR 305
Query: 446 C--------SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
H +I RG E+ S+ +I L + G+L +A +
Sbjct: 306 VLSFKHGRQLHGWVIRRGMEWELSVA------------NALIVLYSKRGQLGQACFIFDQ 353
Query: 498 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM-YVLLSNLYAASGRWAD 556
M E SW A++ A H G K E + + G+ +V + +L A +G D
Sbjct: 354 M-LERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVED 409
Query: 557 AGNMRSRM 564
+ S M
Sbjct: 410 GERLFSLM 417
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 190/424 (44%), Gaps = 58/424 (13%)
Query: 93 YAQNGYADEAREVFYQMPHKNA--ISWNGLLAAYVHNGRIEEACRLF------DSKSDWE 144
YA GYA+ A EVF +M +++ +WN L++ Y G+ E+A L+ K D
Sbjct: 137 YASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRF 196
Query: 145 LISWNCLMGGFVKRKMLGAA--RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQS 202
G + +G A R L + DV N ++ YA+ GD+ +A+N+FD
Sbjct: 197 TFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMI 256
Query: 203 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDM--AREL 260
PH+D +W +M++GY+ +G+L EA F M Q N I + + V + + R+L
Sbjct: 257 PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQ-NGIEPDKVAISSVLARVLSFKHGRQL 315
Query: 261 FEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHY 316
+ R +S N +I Y + G + QA +FD M +RD VSW AIIS +++ +
Sbjct: 316 HGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN- 374
Query: 317 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 376
L F ++ R + TF LS CA+ +E G+++ + K
Sbjct: 375 --GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE------------ 420
Query: 377 LGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL-MVFESMKTIGVKPD 435
GI+ K + + M+ Y R G ++A M+ + M G++
Sbjct: 421 -----------------YGIDPK-MEHYACMVNLYGRAGMMEEAYSMIVQEM---GLEAG 459
Query: 436 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH-YTCMIDLLGRAGRLEEAQDL 494
+L AC G D G + + + + P ++H + +I + +A R E+ + +
Sbjct: 460 PTVWGALLYACYLHGNTDIGE---VAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERV 516
Query: 495 MRNM 498
+ M
Sbjct: 517 RQMM 520
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 161/358 (44%), Gaps = 66/358 (18%)
Query: 4 GHCDSALRVFNTMPRR--SSVSYNAMISGYLRNARFSLARDLFDKM------PQRDLVSW 55
G+ + A VF+ M +R S ++N++ISGY ++ A L+ +M P R
Sbjct: 141 GYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPR 200
Query: 56 NVMLTGYVRNRRLGDA--RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN 113
+ G + + ++G+A R L DV NA++ YA+ G +AR VF +PHK+
Sbjct: 201 VLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260
Query: 114 AISWNGLLAAYVHNGRIEEACRLF----------DSKS---------------------- 141
+SWN +L Y+H+G + EA +F D +
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVI 320
Query: 142 ----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD-MSQAK 196
+WEL N L+ + KR LG A +FD+M RD VSWN +IS ++++ + + +
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFE 380
Query: 197 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQS 251
+ + D T+ +++S GM+++ F M ++ I Y MV Y ++
Sbjct: 381 QMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRA 440
Query: 252 NKMDMAREL------FEAMPSRNVSSWNTMITG--YGQNGDIAQ--ARKLFDMMPQRD 299
M+ A + EA P + W ++ N DI + A++LF++ P +
Sbjct: 441 GMMEEAYSMIVQEMGLEAGP----TVWGALLYACYLHGNTDIGEVAAQRLFELEPDNE 494
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 338 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE 397
F+ L TC + A++ G ++H + + + L+ +Y CG A++VF+ +
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 398 EKD--VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
++D +WN++I+GYA G + A+ ++ M GVKPD T VL AC G + G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 456 TEYFYSMNKD---YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 512
+ K+ Y V ++ + + G + +A+++ +P + SW ++L
Sbjct: 215 EAIHRDLVKEGFGYDVYV----LNALVVMYAKCGDIVKARNVFDMIPHK-DYVSWNSMLT 269
Query: 513 ASRIHG 518
HG
Sbjct: 270 GYLHHG 275
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 238 bits (608), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 196/327 (59%), Gaps = 12/327 (3%)
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 331
+++ Y GD+ AR++FD P++ + V W A+IS Y + + EA+ +F ++ +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETG--CFVGNALLGMYFKCGSIGEA 389
L+ + ALS CAD+ A+++G++I+ + +K + N+LL MY K G +A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 390 NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG------VKPDEITMVGVL 443
+F+ KDV ++ +MI GYA +G +++L +F+ MKTI + P+++T +GVL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 444 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 503
ACSH+GL++ G +F SM DY++ P H+ CM+DL R+G L++A + + MP +P
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 504 AASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSR 563
W LLGA +HGN ELGE+ +F+++ + G YV LSN+YA+ G W + MR R
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 564 MRDVGVQKVTGYSWVEVQNKIHKFTVG 590
+R +++ G SW+E+ + I++F G
Sbjct: 404 VRK---RRMPGKSWIELGSIINEFVSG 427
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 134/276 (48%), Gaps = 34/276 (12%)
Query: 167 LFDKMHVRDVVSWNTMISG-YAQDGDMSQAKNLFDQSPH-QDVFTWTAMVSGYVQNGMLD 224
L K+ V+ T + G Y+ GD+ A+ +FD++P Q++ WTAM+S Y +N
Sbjct: 90 LVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSV 149
Query: 225 EARTFFDQMPQKNEISYNAMVAGYVQSNKMDM-ARELFEAMPSRNV----------SSWN 273
EA F +M + +I + ++ S D+ A ++ E + SR++ + N
Sbjct: 150 EAIELFKRM-EAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRN 208
Query: 274 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 333
+++ Y ++G+ +ARKLFD ++D ++ ++I GYA G +E+L +F ++K +S
Sbjct: 209 SLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQ 268
Query: 334 ------NRSTFSCALSTCADIAALELGKQIHGQVVKTGYET-------GCFVGNALLGMY 380
N TF L C+ +E GK+ H + + Y GC V ++
Sbjct: 269 DTVITPNDVTFIGVLMACSHSGLVEEGKR-HFKSMIMDYNLKPREAHFGCMV-----DLF 322
Query: 381 FKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHG 415
+ G + +A++ + K + V W T++ + HG
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHG 358
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 134/287 (46%), Gaps = 40/287 (13%)
Query: 71 ARRLFDSMPQK-DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGL-----LAAY 124
AR++FD P+K ++V W AM+S Y +N + EA E+F +M + I +G+ L+A
Sbjct: 119 ARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEK-IELDGVIVTVALSAC 177
Query: 125 VHNGRIEEACRLFD------SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS 178
G ++ ++ + +L N L+ +VK ARKLFD+ +DV +
Sbjct: 178 ADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTT 237
Query: 179 WNTMISGYAQDGDMSQAKNLF------DQS------PHQDVFTWTAMVSGYVQNGMLDEA 226
+ +MI GYA +G ++ LF DQS P+ F M + +G+++E
Sbjct: 238 YTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSH--SGLVEEG 295
Query: 227 RTFFDQMP-----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYG 280
+ F M + E + MV + +S + A E MP + N W T++
Sbjct: 296 KRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACS 355
Query: 281 QNGDIAQA----RKLFDMMPQRDCV-SWAAIISGYAQTGHYEEALNM 322
+G++ R++F++ RD V + A+ + YA G ++E M
Sbjct: 356 LHGNVELGEEVQRRIFEL--DRDHVGDYVALSNIYASKGMWDEKSKM 400
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 131/312 (41%), Gaps = 66/312 (21%)
Query: 4 GHCDSALRVFNTMPRRSS-VSYNAMISGYLRNARFSLARDLFDKMPQR------------ 50
G D A +VF+ P + + V + AMIS Y N A +LF +M
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 51 -----------------------------DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK 81
DL N +L YV++ AR+LFD +K
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMP----------HKNAISWNGLLAAYVHNGRIE 131
DV ++ +M+ GYA NG A E+ E+F +M N +++ G+L A H+G +E
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 132 EACRLFDSK-SDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISG 185
E R F S D+ L + C++ F + L A + ++M ++ + V W T++
Sbjct: 294 EGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Query: 186 YAQDGDMSQAKNLFDQSPHQD---VFTWTAMVSGYVQNGMLDEARTFFD-----QMPQKN 237
+ G++ + + + D V + A+ + Y GM DE D +MP K+
Sbjct: 354 CSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRMPGKS 413
Query: 238 EISYNAMVAGYV 249
I +++ +V
Sbjct: 414 WIELGSIINEFV 425
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 124/281 (44%), Gaps = 46/281 (16%)
Query: 87 NAMLSGYAQNGYADEAREVFYQMPHK-NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL 145
+++ Y+ G D AR+VF + P K N + W +++AY N EA LF + + E
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELF-KRMEAEK 162
Query: 146 ISWNCL----------------MGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQD 189
I + + MG + + + R+L D+ N++++ Y +
Sbjct: 163 IELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRL-----AMDLTLRNSLLNMYVKS 217
Query: 190 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----------QKNEI 239
G+ +A+ LFD+S +DV T+T+M+ GY NG E+ F +M N++
Sbjct: 218 GETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDV 277
Query: 240 SYNAMVAGYVQSNKMDMARELFEAM-------PSRNVSSWNTMITGYGQNGDIAQARKLF 292
++ ++ S ++ + F++M P + + M+ + ++G + A +
Sbjct: 278 TFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPRE--AHFGCMVDLFCRSGHLKDAHEFI 335
Query: 293 DMMPQR-DCVSWAAIISGYAQTGHY---EEALNMFIEIKRD 329
+ MP + + V W ++ + G+ EE E+ RD
Sbjct: 336 NQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRD 376
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
Query: 338 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF-EGI 396
F+ +S+ ++L+ G+QIH V K G+ + +L+G Y G + A VF E
Sbjct: 69 FAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETP 127
Query: 397 EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 456
E++++V W MI+ Y + +A+ +F+ M+ ++ D + + LSAC+ G + G
Sbjct: 128 EKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGE 187
Query: 457 E-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL 494
E Y S+ + + ++++ ++G E+A+ L
Sbjct: 188 EIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKL 226
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 161/525 (30%), Positives = 262/525 (49%), Gaps = 62/525 (11%)
Query: 8 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRR 67
+ L VFN++PR+S + + A R +FD + ++ N M + +
Sbjct: 27 AQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDM 86
Query: 68 LGDARRLFDS------MPQKDVVSWNAMLSGYAQNGYADEA---REVFYQMPHKNAISWN 118
D RL++ MP D S+ ++ + G +A + F++ P+ N
Sbjct: 87 ANDVLRLYEQRSRCGIMP--DAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVR----N 140
Query: 119 GLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS 178
++ YV + +E A ++FD S + WN ++ G+ K A KLFD M DVVS
Sbjct: 141 VIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVS 200
Query: 179 WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----P 234
W MI+G+A+ D+ A+ FD+ P + V +W AM+SGY QNG ++A F+ M
Sbjct: 201 WTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGV 260
Query: 235 QKNEISYNAMVAG--------------------------YVQSNKMDM---------ARE 259
+ NE ++ +++ +V++ +DM AR
Sbjct: 261 RPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARR 320
Query: 260 LFEAMPS-RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 318
+F + + RN+ +WN MI+GY + GD++ AR+LFD MP+R+ VSW ++I+GYA G
Sbjct: 321 IFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAAL 380
Query: 319 ALNMFIEIKRDGES-LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 377
A+ F ++ G+S + T LS C +A LELG I + K + +L+
Sbjct: 381 AIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLI 440
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
MY + G++ EA VF+ ++E+DVVS+NT+ +A +G G + L + MK G++PD +
Sbjct: 441 FMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLL 482
T VL+AC+ AGL+ G F S+ P + HY CM DLL
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 212/383 (55%), Gaps = 26/383 (6%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 60
+++ +SA +VF+ + +R +N MISGY + A LFD MP+ D+VSW VM+T
Sbjct: 147 VKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMIT 206
Query: 61 GYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAIS 116
G+ + + L +AR+ FD MP+K VVSWNAMLSGYAQNG+ ++A +F M N +
Sbjct: 207 GFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETT 266
Query: 117 WNGLLAA---YVHNGRIEEACRLFDSKSDWELISWNC-----LMGGFVKRKMLGAARKLF 168
W +++A +L D K + NC L+ K + + +AR++F
Sbjct: 267 WVIVISACSFRADPSLTRSLVKLIDEKR----VRLNCFVKTALLDMHAKCRDIQSARRIF 322
Query: 169 DKMHV-RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
+++ R++V+WN MISGY + GDMS A+ LFD P ++V +W ++++GY NG A
Sbjct: 323 NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAI 382
Query: 228 TFFDQM-----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV----SSWNTMITG 278
FF+ M + +E++ ++++ +++ + + + + S + ++I
Sbjct: 383 EFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFM 442
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
Y + G++ +A+++FD M +RD VS+ + + +A G E LN+ ++K +G +R T+
Sbjct: 443 YARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTY 502
Query: 339 SCALSTCADIAALELGKQIHGQV 361
+ L+ C L+ G++I +
Sbjct: 503 TSVLTACNRAGLLKEGQRIFKSI 525
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 219/473 (46%), Gaps = 56/473 (11%)
Query: 111 HKNAISWNGLLAAYVHNGRIEEACR-----------LFDSKSDWELISWNCLMGGFVKRK 159
H I +N L RI C +FDS + + N + F K
Sbjct: 26 HAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMD 85
Query: 160 MLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFDQ-SPHQDVFTWTAMV 214
M +L+++ + D S+ +I + G + QA L ++ +D + ++
Sbjct: 86 MANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQA--LVEKLGFFKDPYVRNVIM 143
Query: 215 SGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNT 274
YV++ ++ AR FDQ+ Q+ +N M++GY + + A +LF+ MP +V SW
Sbjct: 144 DMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTV 203
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
MITG+ + D+ ARK FD MP++ VSW A++SGYAQ G E+AL +F ++ R G N
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC----------- 383
+T+ +S C+ A L + + + + CFV ALL M+ KC
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 384 ---------------------GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALM 422
G + A +F+ + +++VVSWN++IAGYA +G A+
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 423 VFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL 481
FE M G KPDE+TM+ VLSAC H ++ G + K+ + + Y +I +
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN-QIKLNDSGYRSLIFM 442
Query: 482 LGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 534
R G L EA+ + M E S+ L A +G+ G + ++ KM+
Sbjct: 443 YARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANGD---GVETLNLLSKMK 491
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 172/349 (49%), Gaps = 28/349 (8%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
G+ + A ++F+ MP VS+ MI+G+ + AR FD+MP++ +VSWN ML+GY
Sbjct: 181 GNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYA 240
Query: 64 RNRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREVFYQMPHK----NAI 115
+N DA RLF+ M + V +W ++S + R + + K N
Sbjct: 241 QNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCF 300
Query: 116 SWNGLLAAYVHNGRIEEACRLFDS-KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR 174
LL + I+ A R+F+ + L++WN ++ G+ + + +AR+LFD M R
Sbjct: 301 VKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR 360
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLF-------DQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
+VVSWN++I+GYA +G + A F D P D T +++S L+
Sbjct: 361 NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP--DEVTMISVLSACGHMADLELGD 418
Query: 228 TFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQN 282
D + +KN+I Y +++ Y + + A+ +F+ M R+V S+NT+ T + N
Sbjct: 419 CIVDYI-RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAAN 477
Query: 283 GDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
GD + L M + D V++ ++++ + G +E +F I+
Sbjct: 478 GDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 163/557 (29%), Positives = 276/557 (49%), Gaps = 56/557 (10%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
N +L Y + L AR+LFD M ++DV+SW+ ++ Y Q+ ++F +M
Sbjct: 164 NSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEM------ 216
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLG-AARKLFDKMHVR 174
VH + E C S L + + V R + G + R+ FD +
Sbjct: 217 ---------VHEAKTEPDCVTVTSV----LKACTVMEDIDVGRSVHGFSIRRGFD---LA 260
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
DV N++I Y++ D+ A +FD++ +++ +W ++++G+V N DEA F M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 235 QKNEISYNAMVAGYVQSNKMDMARELFE-AMPSRNVS-------------SWNTMITGYG 280
Q+ V ++ K FE +P +++ + +++I Y
Sbjct: 321 QEAVEVDEVTVVSLLRVCK------FFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYT 374
Query: 281 QNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 340
+ A + D M +D VS + +ISG A G +EA+++F ++ ++ N T
Sbjct: 375 SCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVIS 431
Query: 341 ALSTCADIAALELGKQIHGQVVKTGYETGCF-VGNALLGMYFKCGSIGEANDVFEGIEEK 399
L+ C+ A L K HG ++ VG +++ Y KCG+I A F+ I EK
Sbjct: 432 LLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEK 491
Query: 400 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF 459
+++SW +I+ YA +G +AL +F+ MK G P+ +T + LSAC+H GL+ +G F
Sbjct: 492 NIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIF 551
Query: 460 YSM-NKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP--FEPPAASWGALLGASRI 516
SM +D+ PS +HY+C++D+L RAG ++ A +L++N+P + A++WGA+L R
Sbjct: 552 KSMVEEDHK--PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRN 609
Query: 517 HGNTEL--GEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTG 574
+ E AE V ++EP S Y+L S+ +AA W D MR +++ V+ V G
Sbjct: 610 RFKKLIITSEVVAE-VLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAG 668
Query: 575 YSWVEVQNKIHKFTVGD 591
YS V N +F GD
Sbjct: 669 YSMVREGNLAKRFLAGD 685
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 173/389 (44%), Gaps = 51/389 (13%)
Query: 177 VSW----NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
+SW N++ Y + GD+ FD +D +W +V G + G +E +F +
Sbjct: 58 LSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSK 117
Query: 233 M------PQKNEISY--NAMVAGYVQSNKMD--MARELFEAMPSRNVSSWNTMITGYGQN 282
+ P + + +A + + K+ + R F + S N+++ Y +
Sbjct: 118 LRVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQ----NSILCMYA-D 172
Query: 283 GDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES-LNRSTFSCA 341
D ARKLFD M +RD +SW+ +I Y Q+ L +F E+ + ++ + T +
Sbjct: 173 SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSV 232
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETG-CFVGNALLGMYFKCGSIGEANDVFEGIEEKD 400
L C + +++G+ +HG ++ G++ FV N+L+ MY K + A VF+ ++
Sbjct: 233 LKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN 292
Query: 401 VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS-----------HA 449
+VSWN+++AG+ + +AL +F M V+ DE+T+V +L C H
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 450 GLIDRGTE-------------YFYSMNKDYSVTPSSKHY------TCMIDLLGRAGRLEE 490
+I RG E S+ D S Y + MI L AGR +E
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 491 AQDLMRNMPFEPPAASWGALLGASRIHGN 519
A + +M P A + +LL A + +
Sbjct: 413 AISIFCHMRDTPNAITVISLLNACSVSAD 441
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 155/333 (46%), Gaps = 35/333 (10%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNR 66
DSA RVF+ R+ VS+N++++G++ N R+ A ++F M Q + V + +R
Sbjct: 279 DSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Query: 67 RLGDARRLFDSMPQKDV-------------VSWNAMLSGYAQNGYADEAREVFYQMPHKN 113
+ + +P K + V+ ++++ Y D+A V M +K+
Sbjct: 339 KFFE-----QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKD 393
Query: 114 AISWNGLLAAYVHNGRIEEA----CRLFDSKSDWELISW--NCLMGGFVKRKMLGAARKL 167
+S + +++ H GR +EA C + D+ + +IS C + ++ +
Sbjct: 394 VVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAI 453
Query: 168 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
+ + D+ +++ YA+ G + A+ FDQ +++ +WT ++S Y NG+ D+A
Sbjct: 454 RRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKAL 513
Query: 228 TFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRN----VSSWNTMITGY 279
FD+M QK N ++Y A ++ + +F++M + + ++ ++
Sbjct: 514 ALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDML 573
Query: 280 GQNGDIAQARKLFDMMPQ---RDCVSWAAIISG 309
+ G+I A +L +P+ +W AI+SG
Sbjct: 574 SRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 178/431 (41%), Gaps = 95/431 (22%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 81
N+++ Y + S AR LFD+M +RD++SW+V++ YV+++ +LF M +
Sbjct: 164 NSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 222
Query: 82 --------------------------------------DVVSWNAMLSGYAQNGYADEAR 103
DV N+++ Y++ D A
Sbjct: 223 EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAF 282
Query: 104 EVFYQMPHKNAISWNGLLAAYVHNGRIEEA-------------------------CRLFD 138
VF + +N +SWN +LA +VHN R +EA C+ F+
Sbjct: 283 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 342
Query: 139 SKSDWELI--------------SWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMIS 184
+ I + + L+ + ++ A + D M +DVVS +TMIS
Sbjct: 343 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 402
Query: 185 GYAQDGDMSQAKNLF-DQSPHQDVFTWTAMVSGYVQNGMLDEAR----TFFDQMPQKNEI 239
G A G +A ++F + T ++++ + L ++ + N+I
Sbjct: 403 GLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDI 462
Query: 240 SY-NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR 298
S ++V Y + ++MAR F+ + +N+ SW +I+ Y NG +A LFD M Q+
Sbjct: 463 SVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQK 522
Query: 299 ----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCA---LSTCADI-AA 350
+ V++ A +S G ++ L +F + + + +SC LS +I A
Sbjct: 523 GYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTA 582
Query: 351 LELGKQIHGQV 361
+EL K + V
Sbjct: 583 VELIKNLPEDV 593
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 313 TGHYEEALNMFIEIKRDGESLNRS-TFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 371
+G + E ++ + EI+R G N F CA ++ L F
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWL-------------------F 62
Query: 372 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 431
GN++ Y KCG + F+ + +D VSWN ++ G +GF ++ L F ++ G
Sbjct: 63 QGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 432 VKPDEITMVGVLSAC 446
+P+ T+V V+ AC
Sbjct: 123 FEPNTSTLVLVIHAC 137
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 4 GHCDSALRVFNTM---PRRSSVS--YNAM-ISGYLRNARFSLARDLFDKMPQRDLVSWNV 57
G D A+ +F M P +V NA +S LR ++++ + + D+
Sbjct: 408 GRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTS 467
Query: 58 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----N 113
++ Y + + ARR FD + +K+++SW ++S YA NG D+A +F +M K N
Sbjct: 468 IVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Query: 114 AISWNGLLAAYVHNGRIEEACRLFDS 139
A+++ L+A H G +++ +F S
Sbjct: 528 AVTYLAALSACNHGGLVKKGLMIFKS 553
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 215/405 (53%), Gaps = 23/405 (5%)
Query: 192 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE---ARTFFDQM-------PQKNEISY 241
+S A ++ Q P+ VF + ++S V N + A + +DQ+ + NE +Y
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 242 NAMV------AGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQN-GDIAQARKLFDM 294
++ A + + + A L P + + G+ N G + +AR LF+
Sbjct: 116 PSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFER 175
Query: 295 MPQRDCVSWAAIISGYAQTGHY---EEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
+ + D +W +++ YA + EE L +F+ ++ L + + +CA++
Sbjct: 176 IREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNEL---SLVALIKSCANLGEF 232
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
G H V+K FVG +L+ +Y KCG + A VF+ + ++DV +N MI G
Sbjct: 233 VRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGL 292
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
A HGFG++ + +++S+ + G+ PD T V +SACSH+GL+D G + F SM Y + P
Sbjct: 293 AVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPK 352
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 531
+HY C++DLLGR+GRLEEA++ ++ MP +P A W + LG+S+ HG+ E GE A + +
Sbjct: 353 VEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLL 412
Query: 532 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 576
+E NSG YVLLSN+YA RW D R M+D V K G S
Sbjct: 413 GLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 45 DKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 104
D+ Q LV + Y +L +AR LF+ + + D+ +WN +L+ YA + D E
Sbjct: 149 DRFVQAALVGF------YANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEE 202
Query: 105 V---FYQMP-HKNAISWNGLLAAYVHNGRIEEA--CRLFDSKSDWELISW--NCLMGGFV 156
V F +M N +S L+ + + G ++ K++ L + L+ +
Sbjct: 203 VLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYS 262
Query: 157 KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDG----DMSQAKNLFDQSPHQDVFTWTA 212
K L ARK+FD+M RDV +N MI G A G + K+L Q D T+
Sbjct: 263 KCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVV 322
Query: 213 MVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR 267
+S +G++DE F+ M I Y +V +S +++ A E + MP +
Sbjct: 323 TISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVK 382
Query: 268 -NVSSWNTMITGYGQNGD 284
N + W + + +GD
Sbjct: 383 PNATLWRSFLGSSQTHGD 400
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 68 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI----SWNGLLAA 123
L AR++FD M Q+DV +NAM+ G A +G+ E E++ + + + ++ ++A
Sbjct: 267 LSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISA 326
Query: 124 YVHNGRIEEACRLFDSKS-----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVV 177
H+G ++E ++F+S + ++ + CL+ + L A + KM V+ +
Sbjct: 327 CSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNAT 386
Query: 178 SWNTMISGYAQDGDMSQAK 196
W + + GD + +
Sbjct: 387 LWRSFLGSSQTHGDFERGE 405
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 152/512 (29%), Positives = 258/512 (50%), Gaps = 56/512 (10%)
Query: 121 LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DV 176
L A+ I A +F+ S+ L +N ++ G+ A +F+++ + D
Sbjct: 66 LLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDR 125
Query: 177 VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT----AMVSGYVQNGMLDEARTFFDQ 232
S+ T + +++ +S + L + +T A++ Y G + +AR FD+
Sbjct: 126 FSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDE 185
Query: 233 MPQK-NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSW--------------- 272
MPQ + ++++ ++ GY+Q +K +A +LF M NVS+
Sbjct: 186 MPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSG 245
Query: 273 --------------------NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQ 312
+I YG+ G I+ AR++FD ++D V+W +I YA+
Sbjct: 246 AESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAK 305
Query: 313 TGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 372
TG EE + + ++K + N STF LS+CA A +G+ + + + +
Sbjct: 306 TGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAIL 365
Query: 373 GNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK--TI 430
G AL+ MY K G + +A ++F +++KDV SW MI+GY HG ++A+ +F M+
Sbjct: 366 GTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENC 425
Query: 431 GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEE 490
V+P+EIT + VL+ACSH GL+ G F M + YS TP +HY C++DLLGRAG+LEE
Sbjct: 426 KVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEE 485
Query: 491 AQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAA 550
A +L+RN+P + +W ALL A R++GN +LGE + +M + +LL+ +A
Sbjct: 486 AYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAV 545
Query: 551 SGRWADA-GNMRSRMRDVGVQKVTGYSWVEVQ 581
+G + N ++ R K GYS +E++
Sbjct: 546 AGNPEKSLDNELNKGR-----KEAGYSAIEIE 572
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 27/293 (9%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQK-DVVSWNAMLSGYAQNGYADEAREVFYQMPHK-- 112
N ++ Y ++ DAR++FD MPQ D V+++ +++GY Q A ++F M
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 113 --NAISWNGLLAAYVHNGRIEEA------CRLFDSKSDWELISWNCLMGGFVKRKMLGAA 164
N + L+A G + A C D LI+ L+G + K + +A
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLIT--ALIGMYGKTGGISSA 281
Query: 165 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLD 224
R++FD +DVV+WN MI YA+ G + + L Q ++ + ++ G + +
Sbjct: 282 RRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYS 341
Query: 225 EA----RTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMI 276
EA RT D + ++ + I A+V Y + ++ A E+F M ++V SW MI
Sbjct: 342 EAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMI 401
Query: 277 TGYGQNGDIAQARKLFDMMPQRDC------VSWAAIISGYAQTGHYEEALNMF 323
+GYG +G +A LF+ M + +C +++ +++ + G E + F
Sbjct: 402 SGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCF 454
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 173/385 (44%), Gaps = 83/385 (21%)
Query: 4 GHCDSALRVFNTMPRR-SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV-SWNVMLTG 61
G A +VF+ MP+ +V+++ +++GYL+ ++ +LA DLF M + ++V + + +L+
Sbjct: 174 GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF 233
Query: 62 YVRNRRLGD--------------------------------------ARRLFDSMPQKDV 83
LGD ARR+FD +KDV
Sbjct: 234 LSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDV 293
Query: 84 VSWNAMLSGYAQNGYADEA----REVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS 139
V+WN M+ YA+ G +E R++ Y+ N+ ++ GLL++ ++
Sbjct: 294 VTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE----------- 342
Query: 140 KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 199
FV R + A L ++ D + ++ YA+ G + +A +F
Sbjct: 343 -------------AAFVGRTV---ADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIF 386
Query: 200 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK------NEISY----NAMVAGYV 249
++ +DV +WTAM+SGY +G+ EA T F++M ++ NEI++ NA G +
Sbjct: 387 NRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGL 446
Query: 250 QSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAII 307
+ + + EA + V + ++ G+ G + +A +L +P D +W A++
Sbjct: 447 VMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALL 506
Query: 308 SGYAQTGHYEEALNMFIEIKRDGES 332
+ G+ + ++ + + GE+
Sbjct: 507 AACRVYGNADLGESVMMRLAEMGET 531
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 73/181 (40%), Gaps = 45/181 (24%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGY------------LRNARFS----------- 38
+ G SA R+F+ R+ V++N MI Y LR ++
Sbjct: 274 KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG 333
Query: 39 ------------LARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD 82
+ R + D + + D + ++ Y + L A +F+ M KD
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKD 393
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMPHKNA------ISWNGLLAAYVHNGRIEEACRL 136
V SW AM+SGY +G A EA +F +M +N I++ +L A H G + E R
Sbjct: 394 VKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRC 453
Query: 137 F 137
F
Sbjct: 454 F 454
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 10/219 (4%)
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
L +C D + +IHG +VKTG + F + LL + I A+ +FE + ++
Sbjct: 35 LRSCRDTVEV---SRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNL 90
Query: 402 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYS 461
+NTMI GY+ ++A VF ++ G+ D + + L +CS + G E +
Sbjct: 91 FMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIG-EGLHG 149
Query: 462 MNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 521
+ + +I G++ +A+ + MP A ++ L+ +G +
Sbjct: 150 IALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLM-----NGYLQ 204
Query: 522 LGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNM 560
+ +KA + S + V +S L + +D G++
Sbjct: 205 VSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDL 243
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 229 bits (584), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 227/412 (55%), Gaps = 11/412 (2%)
Query: 175 DVVSWNTMISGYAQDGDM-SQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 233
+VV + ++ Y++ + + ++F P++++F+W ++ + ++G ++ F +M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 234 PQKNEISYN----AMVAGYVQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQNGD 284
+++ + + ++ +++ + +L + S ++ + ++ Y G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 285 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 344
+ ARKLFD MP RD V + A+ GY Q G L MF E+ G +L+ L
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 345 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 404
C + AL+ GK +HG ++ G +GNA+ MY KC + A+ VF + +DV+SW
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 405 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 464
+++I GY G + +F+ M G++P+ +T +GVLSAC+H GL+++ YF M +
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-Q 363
Query: 465 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 524
+Y++ P KHY + D + RAG LEEA+ + +MP +P A GA+L +++GN E+GE
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 525 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 576
+ A + +++P + YV L+ LY+A+GR+ +A ++R M++ + KV G S
Sbjct: 424 RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 177/470 (37%), Gaps = 130/470 (27%)
Query: 65 NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAY 124
N + +F MP +++ SWN ++ ++++G+A ++ ++F +M ++ + +
Sbjct: 80 NHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPL 139
Query: 125 VHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMIS 184
I AC +LI CL GF + +A ++
Sbjct: 140 -----ILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSA-----------------LVI 177
Query: 185 GYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----------- 233
Y G + A+ LFD P +D +TAM GYVQ G F +M
Sbjct: 178 MYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVV 237
Query: 234 --------PQKNEISY--------------------NAMVAGYVQSNKMDMARELFEAMP 265
Q + + NA+ YV+ + +D A +F M
Sbjct: 238 MVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS 297
Query: 266 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 325
R+V SW+++I GYG +GD+ + KLFD E
Sbjct: 298 RRDVISWSSLILGYGLDGDVVMSFKLFD-------------------------------E 326
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 385
+ ++G N TF LS CA HG +V+ + +YF+
Sbjct: 327 MLKEGIEPNAVTFLGVLSACA-----------HGGLVEKSW------------LYFRL-- 361
Query: 386 IGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 445
+ E N V E + + ++ +R G ++A E M VKPDE M VLS
Sbjct: 362 MQEYNIVPE------LKHYASVADCMSRAGLLEEAEKFLEDMP---VKPDEAVMGAVLSG 412
Query: 446 CSHAGLIDRGTEYFYSMNKDYSVTP-SSKHYTCMIDLLGRAGRLEEAQDL 494
C G ++ G + + + P + +Y + L AGR +EA+ L
Sbjct: 413 CKVYGNVEVGERVARELIQ---LKPRKASYYVTLAGLYSAAGRFDEAESL 459
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 168/378 (44%), Gaps = 72/378 (19%)
Query: 8 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM-------------P------ 48
++L VF MP R+ S+N +I + R+ S + DLF +M P
Sbjct: 85 TSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRAC 144
Query: 49 ---------------------QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWN 87
L + ++ YV +L AR+LFD MP +D V +
Sbjct: 145 SASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYT 204
Query: 88 AMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW 143
AM GY Q G A +F +M + +++ LL A G ++ S W
Sbjct: 205 AMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG----KSVHGW 260
Query: 144 ELISWNCL---MGG-----FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
+ +CL +G +VK +L A +F M RDV+SW+++I GY DGD+ +
Sbjct: 261 CIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMS 320
Query: 196 KNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKN---EISYNAMVAGY 248
LFD+ + + T+ ++S G+++++ +F M + N E+ + A VA
Sbjct: 321 FKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADC 380
Query: 249 V-QSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIA----QARKLFDMMPQRDCVS 302
+ ++ ++ A + E MP + + + +++G G++ AR+L + P++ S
Sbjct: 381 MSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRK--AS 438
Query: 303 WAAIISG-YAQTGHYEEA 319
+ ++G Y+ G ++EA
Sbjct: 439 YYVTLAGLYSAAGRFDEA 456
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 115/281 (40%), Gaps = 53/281 (18%)
Query: 9 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ------------------- 49
A ++F+ MP R SV Y AM GY++ L +F +M
Sbjct: 188 ARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQ 247
Query: 50 -------RDLVSW-------------NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAM 89
+ + W N + YV+ L A +F +M ++DV+SW+++
Sbjct: 248 LGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSL 307
Query: 90 LSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW-- 143
+ GY +G + ++F +M + NA+++ G+L+A H G +E++ F ++
Sbjct: 308 ILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNI 367
Query: 144 --ELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMS----QAK 196
EL + + + +L A K + M V+ D ++SG G++ A+
Sbjct: 368 VPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVAR 427
Query: 197 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN 237
L P + + + + Y G DEA + M +K
Sbjct: 428 ELIQLKPRKASY-YVTLAGLYSAAGRFDEAESLRQWMKEKQ 467
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 22/295 (7%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 81
+A++ Y+ + AR LFD MP RD V + M GYV+ +F M
Sbjct: 173 SALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA 232
Query: 82 -DVVSWNAMLSGYAQNGYADEAREVF-YQMPHKNAISW---NGLLAAYVHNGRIEEACRL 136
D V ++L Q G + V + + + + N + YV ++ A +
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTV 292
Query: 137 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDM 192
F + S ++ISW+ L+ G+ + + KLFD+M + V++ ++S A G +
Sbjct: 293 FVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV 352
Query: 193 SQAKNLFDQSPHQDVFT----WTAMVSGYVQNGMLDEARTFFDQMPQK-NEISYNAMVAG 247
++ F ++ + ++ + G+L+EA F + MP K +E A+++G
Sbjct: 353 EKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSG 412
Query: 248 YVQSNKMD----MARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR 298
++ +AREL + P R S + T+ Y G +A L M ++
Sbjct: 413 CKVYGNVEVGERVARELIQLKP-RKASYYVTLAGLYSAAGRFDEAESLRQWMKEK 466
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 237/483 (49%), Gaps = 44/483 (9%)
Query: 149 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 208
N LM + L A K+FD+M DV+SWN+++SGY Q G + LF + DVF
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 209 ----TWTA------------------------------------MVSGYVQNGMLDEART 228
++TA ++ Y + G +D+A
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 229 FFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQA 288
F M +K+ +S+NA+VA ++ K+++ F MP+ + ++N +I + ++GD A
Sbjct: 214 VFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNA 273
Query: 289 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI 348
++ MP + SW I++GY + EA F ++ G + + S L+ A +
Sbjct: 274 FQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAAL 333
Query: 349 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 408
A + G IH K G ++ V +AL+ MY KCG + A +F + K+++ WN MI
Sbjct: 334 AVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMI 393
Query: 409 AGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGL-IDRGTEYFYSMNKDY 466
+GYAR+G +A+ +F +K +KPD T + +L+ CSH + ++ YF M +Y
Sbjct: 394 SGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEY 453
Query: 467 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 526
+ PS +H +I +G+ G + +A+ +++ F +W ALLGA + + +
Sbjct: 454 RIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTV 513
Query: 527 AEMVFKM--EPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKI 584
A + ++ + +Y+++SNLYA RW + G +R MR+ GV K G SW++ + K
Sbjct: 514 AAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKC 573
Query: 585 HKF 587
+
Sbjct: 574 SSY 576
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 195/472 (41%), Gaps = 96/472 (20%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD--------------- 51
+ A +VF+ MP +S+N+++SGY+++ RF LF ++ + D
Sbjct: 107 EDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAAC 166
Query: 52 -------------------------LVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSW 86
+V N ++ Y + + DA +F M +KD VSW
Sbjct: 167 ARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSW 226
Query: 87 NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI 146
NA+++ ++NG + F+QMP+ + +++N L+ A+V +G A ++ +
Sbjct: 227 NAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSS 286
Query: 147 SWNCLMGGFVKRKMLGAARKLFDKMHVRDV-------------------VSWNTMISG-- 185
SWN ++ G+V + G A + F KMH V V W ++I
Sbjct: 287 SWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACA 346
Query: 186 ------------------YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
Y++ G + A+ +F P +++ W M+SGY +NG EA
Sbjct: 347 HKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAI 406
Query: 228 TFFDQMPQKNEIS------YNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMI 276
F+Q+ Q+ + N + M++ FE M + +V ++I
Sbjct: 407 KLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLI 466
Query: 277 TGYGQNGDIAQARKLFDMMP-QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 335
GQ G++ QA+++ D V+W A++ + + A + ++ G++
Sbjct: 467 RAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKD 526
Query: 336 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCF--VGNALLGMYFKCGS 385
+S A E +++ GQ+ K E+G VG++ + KC S
Sbjct: 527 EYLYIVMSNL--YAYHERWREV-GQIRKIMRESGVLKEVGSSWIDSRTKCSS 575
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 129/319 (40%), Gaps = 79/319 (24%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLF------DSM 78
N+++ Y + A +FD+MP D++SWN +++GYV++ R + LF D
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 79 PQK----------------------------------DVVSWNAMLSGYAQNGYADEARE 104
P + +VV N ++ Y + G+ D+A
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 105 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 164
VF M K+ +SWN ++A+ NG++E F + + +++N L+ FVK A
Sbjct: 214 VFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNA 273
Query: 165 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----------------------- 201
++ M + SWNT+++GY +A F +
Sbjct: 274 FQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAAL 333
Query: 202 -----------SPHQ-----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMV 245
H+ V +A++ Y + GML A F MP+KN I +N M+
Sbjct: 334 AVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMI 393
Query: 246 AGYVQSNKMDMARELFEAM 264
+GY ++ A +LF +
Sbjct: 394 SGYARNGDSIEAIKLFNQL 412
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 117/299 (39%), Gaps = 56/299 (18%)
Query: 2 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 61
RNG + L F+ MP +V+YN +I ++++ F+ A + MP + SWN +LTG
Sbjct: 235 RNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTG 294
Query: 62 YVRNRRLGDARRLFDSMPQKD--------------------------------------- 82
YV + + G+A F M
Sbjct: 295 YVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSR 354
Query: 83 VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSD 142
VV +A++ Y++ G A +F+ MP KN I WN +++ Y NG EA +LF+
Sbjct: 355 VVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQ 414
Query: 143 WELISWN----------CLMGGFVKRKMLGAARKLFDKMHVRDVVS-WNTMISGYAQDGD 191
+ + C MLG + ++ ++ V ++I Q G+
Sbjct: 415 ERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGE 474
Query: 192 MSQAKNLFDQSPH-QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-----KNEISYNAM 244
+ QAK + + D W A++ L A+T +M + K+E Y M
Sbjct: 475 VWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVM 533
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 99/253 (39%), Gaps = 82/253 (32%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------------- 47
+++G ++A +V + MP +S S+N +++GY+ + + A + F KM
Sbjct: 265 VKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLS 324
Query: 48 ------------PQRDL--------------VSWNVMLTGYVRNRRLGDARRLFDSMPQK 81
P L V + ++ Y + L A +F +MP+K
Sbjct: 325 IVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRK 384
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVH---------- 126
+++ WN M+SGYA+NG + EA ++F Q+ + + ++ LLA H
Sbjct: 385 NLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLG 444
Query: 127 -----------NGRIEEACRLFDSKSD----WEL-------------ISWNCLMGGFVKR 158
+E C L + W+ ++W L+G R
Sbjct: 445 YFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSAR 504
Query: 159 KMLGAARKLFDKM 171
K L AA+ + KM
Sbjct: 505 KDLKAAKTVAAKM 517
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 239/479 (49%), Gaps = 25/479 (5%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
N +++ Y + A R+F D+VSWNA++ A++ +A ++F MP
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 116 SWNGLLAAYVHNGRIEE--AC------RLFDSKSDWELISWNCLMGGFVKRKMLGAARKL 167
G + + + + +C L + + ++ N L+ + K L +R
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 168 FDKMHVRDVVSWNTMISGYA-QDGDMSQAKNLFDQ------SPHQDVFTWTAMVSGYVQN 220
FD + +++V WN ++SGYA +DG + + LF Q P + F+ TA+ S V
Sbjct: 374 FDYIRDKNIVCWNALLSGYANKDGPICLS--LFLQMLQMGFRPTEYTFS-TALKSCCVTE 430
Query: 221 GMLDEARTFFDQMP-QKNEISYNAMVAGYVQSNKMDMARELFE-AMPSRNVSSWNTMITG 278
L + + +M + N+ ++++ Y ++ M+ A L + A +V N +
Sbjct: 431 --LQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488
Query: 279 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
Y + G ++ KL + Q D VSW I+ +++ ++EE + +F + + ++ TF
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Query: 339 SCALSTCADIAALELGKQIHGQVVKTGYETG-CFVGNALLGMYFKCGSIGEANDVFEGIE 397
LS C+ + L LG IHG + KT + FV N L+ MY KCGSI VFE
Sbjct: 549 VSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR 608
Query: 398 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
EK++++W +I+ HG+G++AL F+ ++G KPD ++ + +L+AC H G++ G
Sbjct: 609 EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMG 668
Query: 458 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL-GASR 515
F M KDY V P HY C +DLL R G L+EA+ L+R MPF A W L G +R
Sbjct: 669 LFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNR 726
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 212/441 (48%), Gaps = 57/441 (12%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------ 109
N +++ Y + + A ++FD MP+++ VS+N ++ GY++ G D+A VF +M
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 110 PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 169
P+++ +S GLL+ C D ++ +L + G F+ +G
Sbjct: 113 PNQSTVS--GLLS-----------CASLDVRAGTQLHGLSLKYGLFMADAFVGTC----- 154
Query: 170 KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF 229
++ Y + + A+ +F+ P + + TW M+S G L E F
Sbjct: 155 ------------LLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFF 202
Query: 230 FDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQ 281
F ++ + E S+ ++ G +D++++L + + +S N++I+ YG+
Sbjct: 203 FRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGK 262
Query: 282 NGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCA 341
G+ A ++F D VSW AII A++ + +AL +F+ + G S N+ T+
Sbjct: 263 CGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSV 322
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
L + + L G+QIHG ++K G ETG +GNAL+ Y KCG++ ++ F+ I +K++
Sbjct: 323 LGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI 382
Query: 402 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS-------HAGLIDR 454
V WN +++GYA G L +F M +G +P E T L +C H+ ++
Sbjct: 383 VCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRM 441
Query: 455 GTEYFYSMNKDYSVTPSSKHY 475
G E + DY ++ + Y
Sbjct: 442 GYE-----DNDYVLSSLMRSY 457
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 145/642 (22%), Positives = 268/642 (41%), Gaps = 111/642 (17%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA------RRLFDSM 78
N +IS Y + SLA +FD+MP+R+ VS+N ++ GY + + A R F +
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 79 PQKDVVS--------------------------------WNAMLSGYAQNGYADEAREVF 106
P + VS +L Y + + A +VF
Sbjct: 113 PNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVF 172
Query: 107 YQMPHKNAISWNGLLAAYVHNGRIEEACRLF-----------DSKSDWELISWNCLMGGF 155
MP K+ +WN +++ H G ++E F +S L +C+
Sbjct: 173 EDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLD 232
Query: 156 VKRKM-LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMV 214
+ +++ A +K D ++ N++IS Y + G+ A+ +F + D+ +W A++
Sbjct: 233 ISKQLHCSATKKGLDC----EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAII 288
Query: 215 SGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRN-- 268
++ +A F MP+ N+ +Y +++ + R++ M +N
Sbjct: 289 CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI-HGMLIKNGC 347
Query: 269 ---VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 325
+ N +I Y + G++ +R FD + ++ V W A++SGYA L++F++
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG-PICLSLFLQ 406
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL-------- 377
+ + G TFS AL +C EL +Q+H +V+ GYE +V ++L+
Sbjct: 407 MLQMGFRPTEYTFSTALKSC---CVTEL-QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQL 462
Query: 378 ------------------------GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYAR 413
G+Y + G E+ + +E+ D VSWN IA +R
Sbjct: 463 MNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSR 522
Query: 414 HGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK-DYSVTPSS 472
+ ++ + +F+ M ++PD+ T V +LS CS + G+ + K D+S +
Sbjct: 523 SDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADT- 581
Query: 473 KHYTC--MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG-NTELGEKAAEM 529
+ C +ID+ G+ G + + E +W AL+ IHG E EK E
Sbjct: 582 --FVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHGYGQEALEKFKET 638
Query: 530 V-FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
+ +P +L+ G + + +M+D GV+
Sbjct: 639 LSLGFKPDRVSFISILTACRHG-GMVKEGMGLFQKMKDYGVE 679
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 165/364 (45%), Gaps = 9/364 (2%)
Query: 155 FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMV 214
F + K L A + ++ V N +IS Y + G++S A +FDQ P ++ ++ ++
Sbjct: 28 FARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTII 87
Query: 215 SGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDM-------ARELFEAMPSR 267
GY + G +D+A F +M + + V+G + +D+ L +
Sbjct: 88 KGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMA 147
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
+ ++ YG+ + A ++F+ MP + +W ++S G +E + F E+
Sbjct: 148 DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELV 207
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 387
R G SL S+F L + + L++ KQ+H K G + V N+L+ Y KCG+
Sbjct: 208 RMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTH 267
Query: 388 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
A +F+ D+VSWN +I A+ +AL +F SM G P++ T V VL S
Sbjct: 268 MAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSS 327
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 507
L+ G + + K+ T +ID + G LE+++ L + + W
Sbjct: 328 LVQLLSCGRQIHGMLIKNGCETGIVLG-NALIDFYAKCGNLEDSR-LCFDYIRDKNIVCW 385
Query: 508 GALL 511
ALL
Sbjct: 386 NALL 389
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 179/322 (55%), Gaps = 16/322 (4%)
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQ---TGHY--EEALNMFIEIK 327
T++ Y +NGD+ ARK+FD MP+R V+W A+I GY G++ +A+ +F
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 328 RDGESL--NRSTFSCALSTCADIAALELGKQIHGQVVKTGY--ETGCFVGNALLGMYFKC 383
G + +T C LS + LE+G +HG + K G+ E F+G AL+ MY KC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 384 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 443
G + A VFE ++ K+V +W +M G A +G G + + M G+KP+EIT +L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 444 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 503
SA H GL++ G E F SM + VTP +HY C++DLLG+AGR++EA + MP +P
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 504 AASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM-------YVLLSNLYAASGRWAD 556
A +L A I+G T +GE+ + + ++E + + YV LSN+ A G+W +
Sbjct: 391 AILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVE 450
Query: 557 AGNMRSRMRDVGVQKVTGYSWV 578
+R M++ ++ GYS+V
Sbjct: 451 VEKLRKEMKERRIKTRPGYSFV 472
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 44/314 (14%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ-----NGYADEAREVFYQMP 110
+L Y +N L AR++FD MP++ V+WNAM+ GY N A +A +F +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRF- 209
Query: 111 HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK 170
+ V C L + S L+ L+ G++++ LG ++
Sbjct: 210 --------SCCGSGVRPTDTTMVCVL-SAISQTGLLEIGSLVHGYIEK--LGFTPEV--- 255
Query: 171 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 230
DV ++ Y++ G ++ A ++F+ ++VFTWT+M +G NG +E
Sbjct: 256 ----DVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLL 311
Query: 231 DQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQ 281
++M + NEI++ ++++ Y ++ ELF++M +R + + ++ G+
Sbjct: 312 NRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGK 371
Query: 282 NGDIAQARKLFDMMPQR-DCV---SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 337
G I +A + MP + D + S S Y +T EE +EI+R+ E L+
Sbjct: 372 AGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSG-- 429
Query: 338 FSCALSTCADIAAL 351
S C D AL
Sbjct: 430 -----SECEDYVAL 438
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 351 LELGKQIHGQVVKTG--YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 408
L +G+ +HG V K G YE+ +G LL Y K G + A VF+ + E+ V+WN MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESE-LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 409 AGYARHG-----FGKQALMVFESMKTI--GVKPDEITMVGVLSACSHAGLIDRGTEYFYS 461
GY H ++A+++F GV+P + TMV VLSA S GL++ G+ +
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGS-LVHG 244
Query: 462 MNKDYSVTPSSKHY--TCMIDLLGRAGRLEEAQDLMRNM 498
+ TP + T ++D+ + G L A + M
Sbjct: 245 YIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELM 283
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 128/348 (36%), Gaps = 100/348 (28%)
Query: 211 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV--------------------- 249
T ++ Y +NG L AR FD+MP++ +++NAM+ GY
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 250 ---------------------QSNKMDMAR------ELFEAMPSRNVSSWNTMITGYGQN 282
Q+ +++ E P +V ++ Y +
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 283 GDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 342
G + A +F++M ++ +W ++ +G A G E N+ + G N TF+ L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 343 STCADIAALELGKQIHGQVVKTGYET-------GCFVGNALLGMYFKCGSIGEANDVFEG 395
S I +E G ++ + +KT + GC V LLG K G I EA
Sbjct: 331 SAYRHIGLVEEGIELF-KSMKTRFGVTPVIEHYGCIVD--LLG---KAGRIQEA------ 378
Query: 396 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
++ + + +KPD I + + +ACS G G
Sbjct: 379 ----------------------------YQFILAMPIKPDAILLRSLCNACSIYGETVMG 410
Query: 456 TEYFYSM----NKDYSVTPSS-KHYTCMIDLLGRAGRLEEAQDLMRNM 498
E ++ +D ++ S + Y + ++L G+ E + L + M
Sbjct: 411 EEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEM 458
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 191/363 (52%), Gaps = 16/363 (4%)
Query: 345 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 404
C D AL+ K +H + + + N+++ MY CGS+ +A VF + E+++ +W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 405 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 464
+I +A++G G+ A+ F K G KPD + AC G ++ G +F SM K
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 465 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 524
+Y + P +HY ++ +L G L+EA + +M EP W L+ SR+HG+ LG+
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGD 368
Query: 525 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKI 584
+ +MV +++ + + + AG + + D+ +K+ + I
Sbjct: 369 RCQDMVEQLDA-------------SRLNKESKAGLVPVKSSDLVKEKLQRMA-KGPNYGI 414
Query: 585 HKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLA 644
GD PE +Y L+ L M GYV +KL LHDV++E K+ L H+E+ A
Sbjct: 415 RYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFA 474
Query: 645 VAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCG 704
L PA IRV+KNLRVC DCHNA+K +SKIVGR +I RD+ RFHH +G+CSC
Sbjct: 475 FISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCR 534
Query: 705 DYW 707
+YW
Sbjct: 535 EYW 537
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 265/525 (50%), Gaps = 51/525 (9%)
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVH 126
A LFD +PQ+D+ S N+ LS + ++G ++ +F Q+ P ++ ++ +L A
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGA--- 93
Query: 127 NGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGY 186
C L G V M+ + +S +I Y
Sbjct: 94 -------CSLLSYPET----------GRQVHALMIKQGAE-------TGTISKTALIDMY 129
Query: 187 AQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYN 242
++ G + + +F+ +D+ +W A++SG+++NG EA F M ++ +E + +
Sbjct: 130 SKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLS 189
Query: 243 AMVAGYVQSNKMDMAREL--FEAMPSRNVSSWNT-MITGYGQNGDIAQARKLFDMM-PQR 298
++V + +++ + R++ T MI+ Y G I +A K+++ +
Sbjct: 190 SVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHT 249
Query: 299 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIH 358
D V ++ISG + +Y+EA F+ + R + N S +L+ C+D + L +GKQIH
Sbjct: 250 DEVMLNSLISGCIRNRNYKEA---FLLMSR--QRPNVRVLSSSLAGCSDNSDLWIGKQIH 304
Query: 359 GQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGK 418
++ G+ + + N L+ MY KCG I +A +F I K VVSW +MI YA +G G
Sbjct: 305 CVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGV 364
Query: 419 QALMVFESM--KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYT 476
+AL +F M + GV P+ +T + V+SAC+HAGL+ G E F M + Y + P ++HY
Sbjct: 365 KALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV 424
Query: 477 CMIDLLGRAGRLEE----AQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAA-EMVF 531
C ID+L +AG EE + +M N P A W A+L A ++ + GE A ++
Sbjct: 425 CFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLME 484
Query: 532 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 576
+ P N+ +YVL+SN YAA G+W +R ++++ G+ K G+S
Sbjct: 485 ETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 163/372 (43%), Gaps = 52/372 (13%)
Query: 40 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQKDVVSWNAMLSGYAQ 95
A LFD++PQRDL S N L+ ++R+ D LF + P ++ +L +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 96 NGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCL 151
Y + R+V M + A IS L+ Y G + ++ R+F+S + +L+SWN L
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 152 MGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNLFDQ---SPH 204
+ GF++ A +F M+ V + ++++ A + Q K + +
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 205 QDVFTWTAMVSGYVQNGMLDEARTFFDQM-PQKNEISYNAMVAGYVQSNKMDMARELFE- 262
V TAM+S Y G+++EA ++ + +E+ N++++G +++ A L
Sbjct: 217 DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR 276
Query: 263 ------------AMPSRNVSSW---------------------NTMITGYGQNGDIAQAR 289
A S N W N ++ YG+ G I QAR
Sbjct: 277 QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL--NRSTFSCALSTCAD 347
+F +P + VSW ++I YA G +AL +F E+ +G + N TF +S CA
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH 396
Query: 348 IAALELGKQIHG 359
++ GK+ G
Sbjct: 397 AGLVKEGKECFG 408
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 146/339 (43%), Gaps = 39/339 (11%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 63
GH ++RVF ++ + VS+NA++SG+LRN + A +F M + + L+ V
Sbjct: 133 GHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVV 192
Query: 64 RN------RRLGDARRLFDSMPQKD-VVSWNAMLSGYAQNGYADEAREVFYQM-PHKNAI 115
+ + G + +D VV AM+S Y+ G +EA +V+ + H + +
Sbjct: 193 KTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEV 252
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG-------FVKRKMLGAARKLF 168
N L++ + N +EA L + + + L G K+ A R F
Sbjct: 253 MLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGF 312
Query: 169 DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEART 228
V D N ++ Y + G + QA+ +F P + V +WT+M+ Y NG +A
Sbjct: 313 ----VSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALE 368
Query: 229 FFDQMPQK------NEISYNAMV-----AGYVQSNK--MDMARELFEAMPSRNVSSWNTM 275
F +M ++ N +++ ++ AG V+ K M +E + +P +
Sbjct: 369 IFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVP--GTEHYVCF 426
Query: 276 ITGYGQNGDIAQARKLFDMMPQRD-----CVSWAAIISG 309
I + G+ + +L + M + D C W A++S
Sbjct: 427 IDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSA 465
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 123/288 (42%), Gaps = 55/288 (19%)
Query: 4 GHCDSALRVFNTMPRRS-SVSYNAMISGYLRNARFSLARDLFDKM-PQRDLVSWNV---- 57
G + A++V+N++ + V N++ISG +RN + A L + P ++S ++
Sbjct: 233 GLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCS 292
Query: 58 ---------------MLTGYVRNRRLGD--------------ARRLFDSMPQKDVVSWNA 88
+ G+V + +L + AR +F ++P K VVSW +
Sbjct: 293 DNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTS 352
Query: 89 MLSGYAQNGYADEAREVFYQMPHK------NAISWNGLLAAYVHNGRIEEACRLFD-SKS 141
M+ YA NG +A E+F +M + N++++ +++A H G ++E F K
Sbjct: 353 MIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKE 412
Query: 142 DWELIS----WNCLMGGFVKRKMLGAARKLFDKMHVRDVVS-----WNTMISGYAQDGDM 192
+ L+ + C + K +L ++M D S W ++S + + D+
Sbjct: 413 KYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDL 472
Query: 193 SQ----AKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 236
++ A+ L +++ ++ + + + Y G D ++ K
Sbjct: 473 TRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNK 520
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 240/493 (48%), Gaps = 70/493 (14%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYL---------------------------- 32
+R G A +VF++MP +++V++ AMI GYL
Sbjct: 128 VRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMF 187
Query: 33 --------RNARFSLARDLFDKMPQR---DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK 81
R A F L R + M + +L+ + ++ Y + L A R FD M +K
Sbjct: 188 VCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEK 247
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
DV+SW A++S ++ G+ +A +F M + W ++ N C + + S
Sbjct: 248 DVISWTAVISACSRKGHGIKAIGMFIGMLNH----W------FLPNEFT--VCSILKACS 295
Query: 142 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 201
+ + + + + V ++M+ DV +++ YA+ G++S + +FD
Sbjct: 296 EEKALRFGRQVHSLVVKRMIKT-----------DVFVGTSLMDMYAKCGEISDCRKVFDG 344
Query: 202 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS----NKMDMA 257
+++ TWT++++ + + G +EA + F M +++ I+ N V +++ + +
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 258 RELFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 313
+EL + +NV +T++ Y + G+ A + +P RD VSW A+ISG +
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSL 464
Query: 314 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 373
GH EAL+ E+ ++G N T+S AL CA+ +L +G+ IH K + FVG
Sbjct: 465 GHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG 524
Query: 374 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVK 433
+AL+ MY KCG + EA VF+ + EK++VSW MI GYAR+GF ++AL + M+ G +
Sbjct: 525 SALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFE 584
Query: 434 PDEITMVGVLSAC 446
D+ +LS C
Sbjct: 585 VDDYIFATILSTC 597
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 194/369 (52%), Gaps = 15/369 (4%)
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ---- 235
N +IS + GD+ A+ +FD P ++ TWTAM+ GY++ G+ DEA F+ +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 236 -KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW---NTMITGYGQNGDIAQARKL 291
NE + ++ + + ++ R++ M V + ++++ Y Q G++ A +
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 292 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
FDMM ++D +SW A+IS ++ GH +A+ MFI + N T L C++ AL
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKAL 300
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 411
G+Q+H VVK +T FVG +L+ MY KCG I + VF+G+ ++ V+W ++IA +
Sbjct: 301 RFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAH 360
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
AR GFG++A+ +F MK + + +T+V +L AC G + G E + K+ S+ +
Sbjct: 361 AREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKN 419
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 531
+ ++ L + G +A ++++ +P SW A+ I G + LG ++ + F
Sbjct: 420 VYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAM-----ISGCSSLGHESEALDF 473
Query: 532 KMEPHNSGM 540
E G+
Sbjct: 474 LKEMIQEGV 482
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 229/468 (48%), Gaps = 25/468 (5%)
Query: 87 NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI 146
N ++S + G AR+VF MP KN ++W ++ Y+ G +EA LF+ +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 147 SWN-----CLMGGFVKRKMLGAARKL---FDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 198
N CL+ +R R++ K+ V +++ ++++ YAQ G+++ A
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 199 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKM 254
FD +DV +WTA++S + G +A F M NE + +++ + +
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKAL 300
Query: 255 DMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 310
R++ + R + + +++ Y + G+I+ RK+FD M R+ V+W +II+ +
Sbjct: 301 RFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAH 360
Query: 311 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 370
A+ G EEA+++F +KR N T L C + AL LGK++H Q++K E
Sbjct: 361 AREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV 420
Query: 371 FVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 430
++G+ L+ +Y KCG +A +V + + +DVVSW MI+G + G +AL + M
Sbjct: 421 YIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE 480
Query: 431 GVKPDEITMVGVLSAC--SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 488
GV+P+ T L AC S + LI R +S+ K + + +I + + G +
Sbjct: 481 GVEPNPFTYSSALKACANSESLLIGRS---IHSIAKKNHALSNVFVGSALIHMYAKCGFV 537
Query: 489 EEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 536
EA + +MP E SW A++ +G +A +++++ME
Sbjct: 538 SEAFRVFDSMP-EKNLVSWKAMIMGYARNG---FCREALKLMYRMEAE 581
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 170/369 (46%), Gaps = 24/369 (6%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQRDLVSWNV 57
G SALR F+ M + +S+ A+IS R A +F M P V +
Sbjct: 232 GELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSIL 291
Query: 58 MLTGYVRNRRLGDA--RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
+ R G + M + DV +++ YA+ G + R+VF M ++N +
Sbjct: 292 KACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTV 351
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV-- 173
+W ++AA+ G EEA LF LI+ N + ++ A L ++H
Sbjct: 352 TWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQI 411
Query: 174 ------RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
++V +T++ Y + G+ A N+ Q P +DV +WTAM+SG G EA
Sbjct: 412 IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEAL 471
Query: 228 TFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGY 279
F +M Q+ N +Y++ + S + + R + NV + +I Y
Sbjct: 472 DFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMY 531
Query: 280 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 339
+ G +++A ++FD MP+++ VSW A+I GYA+ G EAL + ++ +G ++ F+
Sbjct: 532 AKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFA 591
Query: 340 CALSTCADI 348
LSTC DI
Sbjct: 592 TILSTCGDI 600
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 155/636 (24%), Positives = 283/636 (44%), Gaps = 80/636 (12%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL-------- 52
+++G+ SA F+ M R V+YN +ISG R A +L+ +M L
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 53 -----------------VSWNVMLTGY-----VRNR--------RLGD-ARRLFDSMPQK 81
V V+ G+ VR+ RL D A +LFD M +
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 141
++ N +L + Q G + EV+ +M + ++ NGL Y+ G + +++ K
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELE-GVAKNGLTYCYMIRGCSHDR-LVYEGKQ 234
Query: 142 DWELI---SWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 198
L+ WN + ++ N ++ Y+ GD+S +
Sbjct: 235 LHSLVVKSGWN-----------------------ISNIFVANVLVDYYSACGDLSGSMRS 271
Query: 199 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----------PQKNEISYNAMVAGY 248
F+ P +DV +W ++VS G + ++ F +M P + +++ + +
Sbjct: 272 FNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSD- 330
Query: 249 VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 308
+QS K L ++ + +I YG+ I + L+ +P + ++++
Sbjct: 331 IQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMT 390
Query: 309 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS--TCADIAALELGKQIHGQVVKTGY 366
G ++ + MF + +G ++ T S L + + +L +H +K+GY
Sbjct: 391 SLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGY 450
Query: 367 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 426
V +L+ Y K G + VF+ ++ ++ ++I GYAR+G G + +
Sbjct: 451 AADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLRE 510
Query: 427 MKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAG 486
M + + PDE+T++ VLS CSH+GL++ G F S+ Y ++P K Y CM+DLLGRAG
Sbjct: 511 MDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAG 570
Query: 487 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN 546
+E+A+ L+ + +W +LL + RIH N +G +AAE++ +EP N +Y+ +S
Sbjct: 571 LVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSK 630
Query: 547 LYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQN 582
Y G + + +R + + GYS V V+N
Sbjct: 631 FYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 190/438 (43%), Gaps = 69/438 (15%)
Query: 44 FDKMPQRDLVSW---NVMLTGYVRNRRLGD---------ARRLFDSMPQKDVVSWNAMLS 91
F P+ D S+ N Y NRR+ + A FD M +DVV++N ++S
Sbjct: 26 FIATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLIS 85
Query: 92 GYAQNGYADEAREVFYQMP----HKNAISWNGLLAA-----YVHNGRIEEACRLFDSKSD 142
G ++ G + A E++ +M ++A ++ +L+ + G I+ CR+
Sbjct: 86 GNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREG-IQVHCRVISLGFG 144
Query: 143 WELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD-- 200
+ + L+G + +++ A KLFD+M R++ N ++ + Q G ++K LF+
Sbjct: 145 CNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG---ESKRLFEVY 201
Query: 201 -----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-----KNEISYNAMVAGYVQ 250
+ ++ T+ M+ G + ++ E + + + N N +V Y
Sbjct: 202 LRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSA 261
Query: 251 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 310
+ + F A+P ++V SWN+ I+S
Sbjct: 262 CGDLSGSMRSFNAVPEKDVISWNS-------------------------------IVSVC 290
Query: 311 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 370
A G ++L++F +++ G+ + F L+ C+ + ++ GKQIH V+K G++
Sbjct: 291 ADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 371 F-VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 429
V +AL+ MY KC I + +++ + ++ N+++ G K + +F M
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 430 IGVKPDEITMVGVLSACS 447
G DE+T+ VL A S
Sbjct: 411 EGTGIDEVTLSTVLKALS 428
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 1/210 (0%)
Query: 248 YVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAII 307
++ + +MD + E PS V + N I ++G++ A + FD M RD V++ +I
Sbjct: 26 FIATPRMDFS-SFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLI 84
Query: 308 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 367
SG ++ G A+ ++ E+ G + STF LS C+D G Q+H +V+ G+
Sbjct: 85 SGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFG 144
Query: 368 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 427
FV +AL+G+Y + A +F+ + ++++ N ++ + + G K+ V+ M
Sbjct: 145 CNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRM 204
Query: 428 KTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
+ GV + +T ++ CSH L+ G +
Sbjct: 205 ELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 214/439 (48%), Gaps = 23/439 (5%)
Query: 74 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA 133
LF+S+ K +++ Y + G AR VF ++ ++ + W ++A HN R EA
Sbjct: 245 LFNSVFLK-----TSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEA 299
Query: 134 CRLFDSKSDWELISWNCLMG-------GFVKRKMLGA---ARKLFDKMHVRDVVSWNTMI 183
LF + E I N ++ G VK LG A L K +V + +I
Sbjct: 300 LGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLI 359
Query: 184 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEI 239
Y + GDM+ + +F S ++ +WTA++SGY NG D+A M Q+ + +
Sbjct: 360 DLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVV 419
Query: 240 SYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 295
+ ++ + + +E+ + + NVS +++ Y + G +LFD +
Sbjct: 420 TIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRL 479
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
QR+ +W A+I Y + + +F + + T L+ C+D+ AL+LGK
Sbjct: 480 EQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGK 539
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 415
++HG ++K +E+ FV ++ MY KCG + AN F+ + K ++W +I Y +
Sbjct: 540 ELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNE 599
Query: 416 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 475
+ A+ FE M + G P+ T VLS CS AG +D +F M + Y++ PS +HY
Sbjct: 600 LFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHY 659
Query: 476 TCMIDLLGRAGRLEEAQDL 494
+ +I+LL R GR+EEAQ L
Sbjct: 660 SLVIELLNRCGRVEEAQRL 678
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 126/540 (23%), Positives = 243/540 (45%), Gaps = 59/540 (10%)
Query: 28 ISGYLRNARFSLARDLFDKMPQRDL----VSWNVMLTGYVRNRRLGDARRL-----FDSM 78
I + R +A + D + QR + +++ +L VR + L +++ + +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 79 PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNG--RIEEACRL 136
+ + ++ Y G +A++VF + N SWN LL V +G R ++
Sbjct: 143 ESNEFLR-TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLST 201
Query: 137 FDSKS----DWELISWNCLMGGF---------VKRKMLGAARKLFDKMHVRDVVSWNTMI 183
F D + S + + F +K L LF+ + ++ +++
Sbjct: 202 FTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLK-----TSLV 256
Query: 184 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNA 243
Y + G + A+ +FD+ +D+ W AM++G N EA F M + +I N+
Sbjct: 257 DMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNS 316
Query: 244 MVAGYV-----QSNKMDMARELF-EAMPSRNVSSW----NTMITGYGQNGDIAQARKLFD 293
++ + + + +E+ + S+N + +I Y + GD+A R++F
Sbjct: 317 VILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFY 376
Query: 294 MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALEL 353
QR+ +SW A++SGYA G +++AL + ++++G + T + L CA++ A++
Sbjct: 377 GSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQ 436
Query: 354 GKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYAR 413
GK+IH +K + + +L+ MY KCG +F+ +E+++V +W MI Y
Sbjct: 437 GKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVE 496
Query: 414 HGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNKDYSVTP-- 470
+ + + VF M +PD +TM VL+ CS + G E + + + K++ P
Sbjct: 497 NCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFV 556
Query: 471 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA----SWGALLGASRIHGNTELGEKA 526
S++ +I + G+ G L A N F+ A +W A++ A +G EL A
Sbjct: 557 SAR----IIKMYGKCGDLRSA-----NFSFDAVAVKGSLTWTAIIEA---YGCNELFRDA 604
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 191/381 (50%), Gaps = 25/381 (6%)
Query: 164 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVS--- 215
A +F+++ +WN MI + + +A LF D FT+ ++
Sbjct: 71 ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACL 130
Query: 216 -------GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN 268
G +G+ +A F D Q N ++ Y + K D R++F+ MP R+
Sbjct: 131 ASSSIRLGTQVHGLAIKAGFFNDVFFQ------NTLMDLYFKCGKPDSGRKVFDKMPGRS 184
Query: 269 VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 328
+ SW TM+ G N + A +F+ MP R+ VSW A+I+ Y + +EA +F ++
Sbjct: 185 IVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQV 244
Query: 329 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 388
D N T L + +L +G+ +H K G+ CF+G AL+ MY KCGS+ +
Sbjct: 245 DDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQD 304
Query: 389 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACS 447
A VF+ ++ K + +WN+MI HG G++AL +FE M+ V+PD IT VGVLSAC+
Sbjct: 305 ARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACA 364
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 507
+ G + G YF M + Y ++P +H CMI LL +A +E+A +L+ +M +P +
Sbjct: 365 NTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDP---DF 421
Query: 508 GALLGASRIHGNTELGEKAAE 528
+ G G E E ++
Sbjct: 422 NSSFGNEYTDGMNETNETPSQ 442
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 134/289 (46%), Gaps = 23/289 (7%)
Query: 25 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 84
N ++ Y + + R +FDKMP R +VSW ML G V N +L A +F+ MP ++VV
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 85 SWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDSK 140
SW AM++ Y +N DEA ++F +M N + LL A G + + D
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 141 SDWELISWNCLMGG-----FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 195
+ +C +G + K L ARK+FD M + + +WN+MI+ G +A
Sbjct: 278 HKNGFV-LDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 196 KNLFDQ-----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS----YNA-MV 245
+LF++ S D T+ ++S G + + +F +M Q IS +NA M+
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 246 AGYVQSNKMDMARELFEAM---PSRNVSSWNTMITGYGQNGDIAQARKL 291
Q+ +++ A L E+M P N S N G + + ++
Sbjct: 397 QLLEQALEVEKASNLVESMDSDPDFNSSFGNEYTDGMNETNETPSQHQI 445
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 44/179 (24%)
Query: 3 NGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD----------L 52
N DSA VFN MP R+ VS+ AMI+ Y++N R A LF +M D L
Sbjct: 198 NSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNL 257
Query: 53 VSWNVML---------------TGYVRNRRLG--------------DARRLFDSMPQKDV 83
+ + L G+V + LG DAR++FD M K +
Sbjct: 258 LQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQMP-----HKNAISWNGLLAAYVHNGRIEEACRLF 137
+WN+M++ +G +EA +F +M +AI++ G+L+A + G +++ R F
Sbjct: 318 ATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYF 376
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 190/368 (51%), Gaps = 25/368 (6%)
Query: 345 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 404
C ++ ALE + +H + + + ++ MY C S +A +VF + +++ +W
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSY----HTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 405 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 464
TMI A++G G++A+ +F G KPD+ V AC G I+ G +F SM +
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYR 237
Query: 465 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 524
DY + S + Y +I++L G L+EA D + M EP W L+ + G ELG+
Sbjct: 238 DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Query: 525 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEV---- 580
+ AE++ K++ + + ++AG + ++ D ++K+ + ++
Sbjct: 298 RFAELIKKLDA-------------SRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDD 344
Query: 581 -QNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYH 639
+ ++H+F GD H + AF L ++M G+V +T++ VEEEEKE L +
Sbjct: 345 PKKRMHEFRAGDTSHL--GTVSAF-RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFR 401
Query: 640 SEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEG 699
S KLA A I+ A RP+ V++N+R C D HN K IS I GR +I RD ++H + G
Sbjct: 402 SNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNG 461
Query: 700 ICSCGDYW 707
+CSC DYW
Sbjct: 462 VCSCKDYW 469
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 243 AMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVS 302
A + G V++ ++ AR + + + + S++T+I Y A +F+ MP+R+ +
Sbjct: 119 AKLCGEVEA--LEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSET 176
Query: 303 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 362
W +I A+ G E A++MF +G ++ F C I + G +H + +
Sbjct: 177 WGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEG-LLHFESM 235
Query: 363 KTGYETGCFVGN--ALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTM-----IAGYARH 414
Y + + ++ M CG + EA D E + E V W T+ + GY
Sbjct: 236 YRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLEL 295
Query: 415 G 415
G
Sbjct: 296 G 296
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 193/396 (48%), Gaps = 20/396 (5%)
Query: 314 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 373
G++ EA+ + ++ G +++ C ALE + +H ++ + C VG
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECII--ALVSPCDVG 155
Query: 374 --NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 431
NA++ MY C S+ +A VFE + E + + M+ + +G+G++A+ +F K G
Sbjct: 156 ARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEG 215
Query: 432 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 491
KP+ V S C+ G + G+ F +M ++Y + PS +HY + +L +G L+EA
Sbjct: 216 NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEA 275
Query: 492 QDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 551
+ + MP EP W L+ SR+HG+ ELG++ AE+V K++
Sbjct: 276 LNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDA-------------TRL 322
Query: 552 GRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKM 611
+ + AG + ++ D ++ + S + F D HP+ + IY L L ++
Sbjct: 323 DKVSSAGLVATKASDFVKKEPSTRSEPYFYS---TFRPVDSSHPQMNIIYETLMSLRSQL 379
Query: 612 RREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCH 671
+ GYV T+ + E + + + E++AV +L I ++ N+R+ DCH
Sbjct: 380 KEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCH 439
Query: 672 NAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
+ +K +S I GR +I RD+ +H F G+C C + W
Sbjct: 440 DMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 221/453 (48%), Gaps = 37/453 (8%)
Query: 23 SYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
+Y+ I+ + R ++ SLA + KM + D+V+ + +L GY ++R+ DA L D M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 79 PQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRI 130
+ D ++ ++ G + A EA + QM + + +++ ++ G I
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 131 EEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTM 182
+ A L + ++ ++ +N ++ K + + A LF +M + +VV++N++
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 183 ISGYAQDGDMSQAK----NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-- 236
I+ G S A N+ ++ + +V T+ A++ + + G L EA ++M Q+
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 237 --NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARK 290
+ I+YN ++ G+ N++D A+++F+ M S+ N+ ++NT+I G+ + + +
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 291 LFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
LF M QR + V++ II G+ Q G + A +F ++ + + T+S L
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVVSWN 405
L+ I + K+ E F+ N ++ K G +GEA D+F + K DVV++N
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYN 539
Query: 406 TMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
TMI+G ++A +F MK G P+ T
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 184/392 (46%), Gaps = 37/392 (9%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDS 77
V+Y +++G + LA +L +KM + ++V +N ++ + R + A LF
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 78 MPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGR 129
M K +VV++N++++ G +A + M K N +++N L+ A+ G+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 130 IEEACRLFDS----KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV----SWNT 181
+ EA +L + D + I++N L+ GF L A+++F M +D + ++NT
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK- 236
+I+G+ + + LF + + + T+T ++ G+ Q G D A+ F QM
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 237 ---NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQAR 289
+ ++Y+ ++ G K+D A +F+ + N+ +NTMI G + G + +A
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Query: 290 KLF-DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCA----LST 344
LF + + D V++ +ISG +EA ++F ++K DG N T++ L
Sbjct: 524 DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
Query: 345 CADIAALELGKQIHGQVVKTGYETGCFVGNAL 376
C A+ EL K++ T V N L
Sbjct: 584 CDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 124/602 (20%), Positives = 240/602 (39%), Gaps = 106/602 (17%)
Query: 7 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVM 58
D A+ +F M P S V +N ++S + +F L L ++M DL ++++
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 59 LTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN 118
+ + R +L A A+L+ + GY + ++ +
Sbjct: 125 INCFCRRSQLSLAL---------------AVLAKMMKLGY------------EPDIVTLS 157
Query: 119 GLLAAYVHNGRIEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMHVR 174
LL Y H+ RI +A L D + + ++ L+ G A L D+M R
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 175 ----DVVSWNTMISGYAQDGDMSQAKNLFDQSP----HQDVFTWTAMVSGYVQNGMLDEA 226
D+V++ T+++G + GD+ A NL ++ +V + ++ + ++ A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 227 RTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITG 278
F +M K N ++YN+++ + A L M + NV ++N +I
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 279 YGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
+ + G + +A KL + M QR D +++ +I+G+ +EA MF + N
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
T+ N L+ + KC + + ++F
Sbjct: 398 IQTY-----------------------------------NTLINGFCKCKRVEDGVELFR 422
Query: 395 GIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 450
+ ++ + V++ T+I G+ + G A MVF+ M + V D +T +L G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 451 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 510
+D F + K + + Y MI+ + +AG++ EA DL ++ +P ++ +
Sbjct: 483 KLDTALVIFKYLQKS-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTM 541
Query: 511 LGASRIHGNTELGEKAAEMVFKMEPH----NSGMYVLLSNLYAASGRWADAGNMRSRMRD 566
+ + L ++A ++ KM+ NSG Y L A + + MR
Sbjct: 542 ISG---LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Query: 567 VG 568
G
Sbjct: 599 SG 600
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 113/219 (51%), Gaps = 21/219 (9%)
Query: 2 RNGHCDSALRVFNTMPRRS----SVSYNAMISGYLRNARFSLARDLFDKMPQRDLV---- 53
+ G A ++ M +RS +++YN +I+G+ + R A+ +F M +D +
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 54 SWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQM 109
++N ++ G+ + +R+ D LF M Q+ + V++ ++ G+ Q G D A+ VF QM
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 110 PHK----NAISWNGLLAAYVHNGRIEEACRLFD--SKSDWEL--ISWNCLMGGFVKRKML 161
+ ++++ LL G+++ A +F KS+ EL +N ++ G K +
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 162 GAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLF 199
G A LF + ++ DVV++NTMISG + +A +LF
Sbjct: 520 GEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/390 (18%), Positives = 162/390 (41%), Gaps = 24/390 (6%)
Query: 223 LDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNT 274
+D+A F M P + + +N +++ + NK ++ L E M + +S +++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 275 MITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
I + + ++ A K+ + + D V+ +++++GY + +A+ + ++ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 331 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 390
+ TF+ + + Q+V+ G + ++ K G I A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 391 DVFEGIE----EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
++ +E + +VV +NT+I ++ + A+ +F M+T G++P+ +T +++
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 447 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM---PFEPP 503
+ G + +M + + P+ + +ID + G+L EA+ L M +P
Sbjct: 304 CNYGRWSDASRLLSNM-LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 504 AASWGALLGASRIHGNTELGEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRS 562
++ L+ +H + ++ + MV K N Y L N + R D +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 563 RMRDVGVQKVTGYSWVEVQNKIHKFTVGDC 592
M G+ T +Q F GDC
Sbjct: 423 EMSQRGLVGNTVTYTTIIQG---FFQAGDC 449
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 227/453 (50%), Gaps = 40/453 (8%)
Query: 23 SYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
+Y+ +I+ + R ++ LA + KM + ++V+ + +L GY ++R+ +A L D M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 79 ----PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRI 130
Q + V++N ++ G + A EA + +M K + +++ ++ G
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 131 EEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTM 182
+ A L + +L + +N ++ G K K + A LF +M + +VV+++++
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 183 ISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE 238
IS G S A L ++ + DVFT++A++ +V+ G L EA +D+M +++
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 239 ----ISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARK 290
++Y++++ G+ +++D A+++FE M S+ +V ++NT+I G+ + + + +
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 291 LFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
+F M QR + V++ +I G Q G + A +F E+ DG N T++ L
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVV 402
LE + + ++ E + N ++ K G + + D+F + K DVV
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 403 SWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 435
++NTMI+G+ R G ++A +F+ MK G P+
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/579 (20%), Positives = 257/579 (44%), Gaps = 82/579 (14%)
Query: 2 RNG----HCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL- 52
RNG D A+ +F M P S + ++ ++S + +F + L ++M +
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 53 ---VSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREV 105
++++++ + R +L A + M + ++V+ +++L+GY + EA +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 106 FYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVK 157
QM N +++N L+ + + EA L D +L+++ ++ G K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 158 RKMLGAARKLFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFT 209
R A L +KM V+ +NT+I G + M A NLF + + +V T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 210 WTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMP 265
+++++S G +A M ++ + +++A++ +V+ K+ A +L++ M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 266 SRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYE 317
R++ +++++I G+ + + +A+++F+ M + C V++ +I G+ + E
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 318 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 377
E + +F E+ + G N T++ + ++ ++I ++V G
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP--------- 464
Query: 378 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
+++++NT++ G ++G ++A++VFE ++ ++P
Sbjct: 465 ----------------------NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
T ++ AG ++ G + F +++ V P Y MI R G EEA L +
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 498 MPFE---PPAASWGALLGASRIHGNTELGEKAAEMVFKM 533
M + P + + L+ A G+ E +AE++ +M
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDR---EASAELIKEM 597
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 203/469 (43%), Gaps = 65/469 (13%)
Query: 100 DEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCL 151
D+A +F +M P + I ++ LL+A + + L + + + +++ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 152 MGGFVKRKMLGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 207
+ F +R L A + KM + ++V+ +++++GY +S+A L DQ
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ------ 176
Query: 208 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR 267
V+GY Q N +++N ++ G NK A L + M ++
Sbjct: 177 ----MFVTGY-----------------QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 268 ----NVSSWNTMITGYGQNGDIAQARKLFDMMPQ----RDCVSWAAIISGYAQTGHYEEA 319
++ ++ ++ G + GD A L + M Q + + II G + H ++A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 320 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 379
LN+F E++ G N T+S +S + ++ +++ F +AL+
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 380 YFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 435
+ K G + EA +++ + ++ +V+++++I G+ H +A +FE M + PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 436 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLM 495
+T ++ ++ G E F M++ + ++ Y +I L +AG + AQ++
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 496 RNMPFE---PPAASWGALLGASRIHGNTELGEKAAEMVF------KMEP 535
+ M + P ++ LL +G E A +VF KMEP
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLE----KAMVVFEYLQRSKMEP 499
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 122/225 (54%), Gaps = 24/225 (10%)
Query: 1 MRNGHCDSALRVFNTMPRRSS----VSYNAMISGYLRNARFSLARDLFDKMPQR----DL 52
++ G A ++++ M +RS V+Y+++I+G+ + R A+ +F+ M + D+
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 53 VSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQ 108
V++N ++ G+ + +R+ + +F M Q+ + V++N ++ G Q G D A+E+F +
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 109 MPH----KNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKM 160
M N +++N LL NG++E+A +F+ SK + + ++N ++ G K
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 161 LGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQ 201
+ LF + ++ DVV++NTMISG+ + G +A LF +
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 133/318 (41%), Gaps = 17/318 (5%)
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
P + ++ ++S A+ ++ +++ +++ G N T+S ++ + L L
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLAL 136
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA----NDVFEGIEEKDVVSWNTMIAGY 411
+ G+++K GYE ++LL Y I EA + +F + + V++NT+I G
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
H +A+ + + M G +PD +T V++ G D M + + P
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPG 255
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASRIHGN-TELGEKAA 527
Y +ID L + +++A +L + M P ++ +L+ +G ++ +
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 528 EMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKF 587
+M+ + + + L + + G+ +A ++ D V++ S V + I+ F
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEA----EKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 588 TVGDCFHPEKDRIYAFLE 605
C H D E
Sbjct: 372 ----CMHDRLDEAKQMFE 385
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 217/456 (47%), Gaps = 40/456 (8%)
Query: 23 SYNAMISGYLRNARFSLARDLFDKMPQ----RDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
+YN MI+ R ++ S A + KM + +V+ N +L G+ R+ +A L D M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 79 P----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRI 130
Q D V++ ++ G Q+ A EA + +M K + +++ ++ G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 131 EEACRLFDS----KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTM 182
+ A L + K + +++ ++ ++ K + + A LF +M + DV +++++
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 183 ISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-- 236
IS G S A L ++ + +V T+ +++ + + G L EA FD+M Q+
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 237 --NEISYNAMVAGYVQSNKMDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARK 290
N ++YN+++ G+ +++D A+++F M S++ V ++NT+I G+ + + +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 291 LFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
LF M +R + V++ +I G+ Q + A +F ++ DG N T++ L
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVV 402
LE + + K+ E + N + K G + + D+F + K DV+
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 403 SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
++NTMI+G+ + G ++A +F MK G PD T
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/571 (21%), Positives = 250/571 (43%), Gaps = 80/571 (14%)
Query: 7 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVM 58
D A+ +F M P S V ++ ++S + +F L +KM +L ++N+M
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 59 LTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMP---- 110
+ R +L A + M + +V+ N++L+G+ EA + QM
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 111 HKNAISWNGLLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKMLGAARK 166
+ +++ L+ + + EA R+ +L+++ ++ G KR A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 167 LFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYV 218
L +KM DVV ++T+I + + A NLF + ++ DVFT+++++S
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 219 QNGM-LDEARTFFDQMPQK---NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVS 270
G D +R D + +K N +++N+++ + + K+ A +LF+ M R N+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEI 326
++N++I G+ + + +A+++F +M +DC V++ +I+G+ + + + +F ++
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
R G N T++ IHG +F+
Sbjct: 407 SRRGLVGNTVTYTTL---------------IHG--------------------FFQASDC 431
Query: 387 GEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 442
A VF+ + +++++NT++ G ++G ++A++VFE ++ ++PD T +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 443 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 502
AG ++ G + F S++ V P Y MI + G EEA L M +
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 503 PAASWGALLGASRIHGNTELGEKAAEMVFKM 533
P G R H +AE++ +M
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 131/288 (45%), Gaps = 64/288 (22%)
Query: 2 RNGHCDSALRVFNTMPRRSS----VSYNAMISGYLRNARFSLARDLFDKMPQRD----LV 53
+ G A ++F+ M +RS V+YN++I+G+ + R A+ +F M +D +V
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 54 SWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQM 109
++N ++ G+ + +++ D LF M ++ + V++ ++ G+ Q D A+ VF QM
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 110 P----HKNAISWNGLLAAYVHNGRIEEA--------------------------CRLFDS 139
H N +++N LL NG++E+A C+
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 140 KSDWEL-------------ISWNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTM 182
+ W+L I++N ++ GF K+ + A LF KM + D ++NT+
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 183 ISGYAQDGDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQNGMLDEA 226
I + +DGD + + L + D T+ +V+ + +G LD+
Sbjct: 562 IRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 608
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/574 (22%), Positives = 262/574 (45%), Gaps = 86/574 (14%)
Query: 7 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVM 58
D A+ +F M P S V +N ++S + +F L L ++M DL ++++
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 59 LTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPH--- 111
+ + R +L A + M + D+V+ +++L+GY + +A + QM
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 112 -KNAISWNGLLAAYVHNGRIEEACRLFDSK----SDWELISWNCLMGGFVKRKMLGAARK 166
+ ++ L+ + + EA L D +L+++ ++ G KR + A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 167 LFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYV 218
L KM DVV +NT+I G + M A NLF + ++ DVFT+++++S
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 219 QNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS---- 270
G +A M ++ N ++++A++ +V+ K+ A +L++ M R++
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEI 326
+++++I G+ + + +A+ +F++M +DC V+++ +I G+ + EE + +F E+
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
+ G N T++ IHG +F+
Sbjct: 425 SQRGLVGNTVTYT---------------TLIHG--------------------FFQARDC 449
Query: 387 GEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 442
A VF+ + +++++N ++ G ++G +A++VFE ++ ++PD T +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 443 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE- 501
+ AG ++ G E F +++ V+P+ Y MI R G EEA L++ M +
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 502 --PPAASWGALLGASRIHGNTELGEKAAEMVFKM 533
P + ++ L+ A G+ E +AE++ +M
Sbjct: 569 PLPNSGTYNTLIRARLRDGDR---EASAELIKEM 599
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 224/472 (47%), Gaps = 40/472 (8%)
Query: 20 SSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLF 75
++++++ +I+G R S A +L D+M + DL++ N ++ G + + +A L
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 76 DSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAAYVHN 127
D M Q + V++ +L+ ++G A E+ +M +N A+ ++ ++ +
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 128 GRIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSW 179
G ++ A LF+ +I++N L+GGF KL M R +VV++
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
+ +I + ++G + +A+ L + H+ D T+T+++ G+ + LD+A D M
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 236 K----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNV----SSWNTMITGYGQNGDIAQ 287
K N ++N ++ GY ++N++D ELF M R V ++NT+I G+ + G +
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 288 ARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 343
A++LF M R + V++ ++ G G E+AL +F +I++ L+ ++ +
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 344 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----K 399
+ + ++ + + G + G N ++G K G + EA +F +EE
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 400 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
D ++N +I + G +++ + E +K G D T+ V+ S L
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 194/386 (50%), Gaps = 40/386 (10%)
Query: 2 RNGHCDSALRVFNTMPRRS----SVSYNAMISGYLRNARFSLARDLFDKMPQR----DLV 53
++G A+ + M R+ +V Y+ +I G ++ A +LF++M + +++
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 54 SWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQM 109
++N+++ G+ R D +L M ++ +VV+++ ++ + + G EA E+ +M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 110 PHK----NAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKML 161
H+ + I++ L+ + +++A ++ D D + ++N L+ G+ K +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 162 GAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAM 213
+LF KM +R D V++NT+I G+ + G ++ AK LF + + ++ T+ +
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 214 VSGYVQNGMLDEARTFFDQMPQ-KNEIS---YNAMVAGYVQSNKMDMARELFEAMPSR-- 267
+ G NG ++A F+++ + K E+ YN ++ G ++K+D A +LF ++P +
Sbjct: 480 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 268 --NVSSWNTMITGYGQNGDIAQARKLFDMMPQ----RDCVSWAAIISGYAQTGHYEEALN 321
V ++N MI G + G +++A LF M + D ++ +I + G +++
Sbjct: 540 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 599
Query: 322 MFIEIKRDGESLNRSTFSCALSTCAD 347
+ E+KR G S++ ST + +D
Sbjct: 600 LIEELKRCGFSVDASTIKMVIDMLSD 625
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/503 (20%), Positives = 211/503 (41%), Gaps = 62/503 (12%)
Query: 99 ADEAREVFYQM----PHKNAISWNGLLAAYVHNGR---IEEACRLFDSKS-DWELISWNC 150
AD+A ++F M P I ++ L +A + + C+ + K L + +
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 151 LMGGFVK-RKM---LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ- 205
++ F + RK+ A K+ + + ++++T+I+G +G +S+A L D+
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 206 ---DVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMAR 258
D+ T +V+G +G EA D+M Q N ++Y ++ +S + +A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 259 ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 318
EL M RN+ + D V ++ II G + G +
Sbjct: 249 ELLRKMEERNI---------------------------KLDAVKYSIIIDGLCKHGSLDN 281
Query: 319 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 378
A N+F E++ G + N T++ + + + G ++ ++K + L+
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 379 MYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 434
+ K G + EA ++ + + + D +++ ++I G+ + +A + + M + G P
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 435 DEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL 494
+ T +++ A ID G E F M+ V + Y +I G+L A++L
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSL-RGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 495 MRNM---PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH----NSGMYVLLSNL 547
+ M P ++ LL +G + EKA E+ K+E + G+Y ++ +
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGES---EKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 548 YAASGRWADAGNMRSRMRDVGVQ 570
+ + DA ++ + GV+
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVK 540
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 156/383 (40%), Gaps = 28/383 (7%)
Query: 210 WTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 269
++ VS +VQ +L+ + NE+S+ F A RN+
Sbjct: 9 LSSQVSKFVQPRLLETGTLRIALINCPNELSF--------------CCERGFSAFSDRNL 54
Query: 270 SSWNTMITGY---GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 326
S + +G + I R + P + ++ + S A+T Y+ L + ++
Sbjct: 55 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
+ G + N T S ++ L L G+++K GYE + L+ G +
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174
Query: 387 GEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 442
EA ++ + + E D+++ NT++ G G +A+++ + M G +P+ +T V
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 443 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 502
L+ +G E M ++ ++ + Y+ +ID L + G L+ A +L M +
Sbjct: 235 LNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 503 PAA---SWGALLGASRIHGNTELGEKAA-EMVFKMEPHNSGMYVLLSNLYAASGRWADAG 558
++ L+G G + G K +M+ + N + +L + + G+ +A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 559 NMRSRM--RDVGVQKVTGYSWVE 579
+ M R + +T S ++
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLID 376
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/547 (23%), Positives = 245/547 (44%), Gaps = 56/547 (10%)
Query: 7 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVM 58
D A+ F+ M P ++V N +I ++R R +A L+ KM R ++ S+N++
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 59 LTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN- 113
+ + +L + F + Q DVV++N +L G EA +F M
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 114 ------------------AISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCL 151
I++N L+ GR+ EA L + +++++ +
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 152 MGGFVKRKMLGAARKLFDKM---HVR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-- 205
+ G K +A L KM H++ DVV ++ +I +DG S A+ LF + +
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 206 --DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARE 259
+VFT+ M+ G+ G +A+ M ++ + +++NA+++ V+ K+ A +
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 260 LFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 315
L + M R + ++N+MI G+ ++ A+ +FD+M D V++ II Y +
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 316 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 375
+E + + EI R G N +T++ + ++ L + + +++ G N
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 376 LLGMYFKCGSIGEANDVFEGIE----EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 431
LL + + + EA ++FE I+ + D V++N +I G + +A +F S+ G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 432 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 491
V+PD T ++S I F+ M KD P + Y +I +AG ++++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 492 QDLMRNM 498
+L+ M
Sbjct: 627 IELISEM 633
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 180/383 (46%), Gaps = 32/383 (8%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDS 77
V+Y +++G + A +L KM + D+V ++ ++ ++ DA+ LF
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 78 MPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGR 129
M +K +V ++N M+ G+ G +A+ + M + + +++N L++A V G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 130 IEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 185
+ EA +L D + +++N ++ GF K A+ +FD M DVV++NT+I
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDV 441
Query: 186 YAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KN 237
Y + + + L + + + T+ ++ G+ + L+ A+ F +M +
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 238 EISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFD 293
I+ N ++ G+ ++ K++ A ELFE + + ++N +I G + + +A LF
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 294 MMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
+P + D ++ +ISG+ +A +F ++K +G + ST++ + C
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 350 ALELGKQIHGQVVKTGYETGCFV 372
++ ++ ++ G+ F
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFT 644
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/547 (23%), Positives = 245/547 (44%), Gaps = 56/547 (10%)
Query: 7 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVM 58
D A+ F+ M P ++V N +I ++R R +A L+ KM R ++ S+N++
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 59 LTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN- 113
+ + +L + F + Q DVV++N +L G EA +F M
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 114 ------------------AISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCL 151
I++N L+ GR+ EA L + +++++ +
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 152 MGGFVKRKMLGAARKLFDKM---HVR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-- 205
+ G K +A L KM H++ DVV ++ +I +DG S A+ LF + +
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 206 --DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARE 259
+VFT+ M+ G+ G +A+ M ++ + +++NA+++ V+ K+ A +
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 260 LFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 315
L + M R + ++N+MI G+ ++ A+ +FD+M D V++ II Y +
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 316 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 375
+E + + EI R G N +T++ + ++ L + + +++ G N
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 376 LLGMYFKCGSIGEANDVFEGIE----EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 431
LL + + + EA ++FE I+ + D V++N +I G + +A +F S+ G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 432 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 491
V+PD T ++S I F+ M KD P + Y +I +AG ++++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 492 QDLMRNM 498
+L+ M
Sbjct: 627 IELISEM 633
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 180/382 (47%), Gaps = 32/382 (8%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDS 77
V+Y +++G + A +L KM + D+V ++ ++ ++ DA+ LF
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 78 MPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGR 129
M +K +V ++N M+ G+ G +A+ + M + + +++N L++A V G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 130 IEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 185
+ EA +L D + +++N ++ GF K A+ +FD M DVV++NT+I
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDV 441
Query: 186 YAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KN 237
Y + + + L + + + T+ ++ G+ + L+ A+ F +M +
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 238 EISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFD 293
I+ N ++ G+ ++ K++ A ELFE + + ++N +I G + + +A LF
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 294 MMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
+P + D ++ +ISG+ +A +F ++K +G + ST++ + C
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 350 ALELGKQIHGQVVKTGYETGCF 371
++ ++ ++ G+ F
Sbjct: 622 EIDKSIELISEMRSNGFSGDAF 643
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 124/570 (21%), Positives = 256/570 (44%), Gaps = 78/570 (13%)
Query: 7 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVM 58
D A+ +F M P S V +N ++S + +F L L ++M DL S+N++
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 59 LTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQM----P 110
+ + R +L A + M + D+V+ +++L+GY EA + QM
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 111 HKNAISWNGLLAAYVHNGRIEEACRLFDSK----SDWELISWNCLMGGFVKRKMLGAARK 166
N +++N L+ + + EA L D +L ++ ++ G KR + A
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 167 LFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYV 218
L KM DVV + T+I +++ A NLF + ++ +V T+ +++
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 219 QNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS---- 270
G +A M ++ N ++++A++ +V+ K+ A +L++ M R++
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEI 326
+++++I G+ + + +A+ +F++M +DC V++ +I G+ + EE + +F E+
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
+ G N T++ + ++ ++I ++V G
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP------------------ 463
Query: 387 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
D+++++ ++ G ++G ++AL+VFE ++ ++PD T ++
Sbjct: 464 -------------DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 447 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE---PP 503
AG ++ G + F S++ V P+ YT MI R G EEA L R M + P
Sbjct: 511 CKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 504 AASWGALLGASRIHGNTELGEKAAEMVFKM 533
+ ++ L+ A G+ +AE++ +M
Sbjct: 570 SGTYNTLIRARLRDGDK---AASAELIKEM 596
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 165/340 (48%), Gaps = 36/340 (10%)
Query: 5 HCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWN 56
+ + AL +F M R + V+YN++I R+S A L M +R ++V+++
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 57 VMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK 112
++ +V+ +L +A +L+D M ++ D+ +++++++G+ + DEA+ +F M K
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 113 ----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRKMLGAA 164
N +++N L+ + R+EE LF S L+ ++N L+ G + A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 165 RKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSG 216
+K+F KM D+++++ ++ G + G + +A +F+ D++T+ M+ G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 217 YVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----N 268
+ G +++ F + K N I Y M++G+ + + A LF M N
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 269 VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 308
++NT+I ++GD A + +L M V A+ IS
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 224/456 (49%), Gaps = 40/456 (8%)
Query: 23 SYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
+YN +I+ + R ++ SLA L KM + +V+ + +L GY +R+ DA L D M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 79 PQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRI 130
+ D +++ ++ G + A EA + +M + N +++ ++ G I
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 131 EEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTM 182
+ A L + +K + ++ ++ ++ K + A LF +M + +V++++++
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 183 IS---GYAQDGDMSQA-KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-- 236
IS Y + D S+ ++ ++ + +V T+ A++ +V+ G L EA +D+M ++
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 237 --NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARK 290
+ +Y++++ G+ +++D A+ +FE M S+ NV ++NT+I G+ + I + +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 291 LFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
LF M QR + V++ +I G+ Q + A +F ++ DG N T++ L
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVV 402
LE + + ++ E + N ++ K G + + D+F + K DV+
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 403 SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
+NTMI+G+ R G ++A +F M+ G PD T
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/557 (21%), Positives = 245/557 (43%), Gaps = 84/557 (15%)
Query: 1 MRNG----HCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ--- 49
+RNG D A+ +F M P S +N ++S + +F L L +KM +
Sbjct: 57 LRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 50 -RDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEARE 104
+L ++N+++ + R ++ A L M + +V+ +++L+GY +A
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 105 VFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFDSK----SDWELISWNCLMGGFV 156
+ QM + I++ L+ + + EA L D L+++ ++ G
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 157 KRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVF 208
KR + A L +KM +VV ++T+I + A NLF + ++ +V
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 209 TWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAM 264
T+++++S +A M ++ N +++NA++ +V+ K+ A +L++ M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 265 PSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHY 316
R++ +++++I G+ + + +A+ +F++M +DC V++ +I+G+ +
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 317 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 376
+E + +F E+ + G N T++ IHG
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYT---------------TLIHG----------------- 444
Query: 377 LGMYFKCGSIGEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 432
+F+ A VF+ + +++++NT++ G ++G ++A++VFE ++ +
Sbjct: 445 ---FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 433 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 492
+P T ++ AG ++ G + F S++ V P Y MI R G EEA
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 493 DLMRNMPFEPPAASWGA 509
L R M + P G
Sbjct: 561 ALFRKMREDGPLPDSGT 577
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 196/448 (43%), Gaps = 42/448 (9%)
Query: 125 VHNGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH----VRDV 176
+H+ ++++A LF S+ + +N L+ K K L +KM ++
Sbjct: 61 LHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNL 120
Query: 177 VSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
++N +I+ + + +S A L + + T +++++GY + +A DQ
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 233 MPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGD 284
M + + I++ ++ G NK A L + M R N+ ++ ++ G + GD
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 285 IAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 340
I A L + M + + V ++ +I + H ++ALN+F E++ G N T+S
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 341 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK- 399
+S + ++ +++ NAL+ + K G + EA +++ + ++
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 400 ---DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 456
D+ +++++I G+ H +A +FE M + P+ +T +++ A ID G
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 457 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGA 513
E F M++ + ++ YT +I +A + AQ + + M P ++ LL
Sbjct: 421 ELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 514 SRIHGNTELGEKAAEMVF------KMEP 535
+G E A +VF KMEP
Sbjct: 480 LCKNGKLE----KAMVVFEYLQRSKMEP 503
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 140/602 (23%), Positives = 262/602 (43%), Gaps = 78/602 (12%)
Query: 4 GHC-----DSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV- 53
G+C DSA +VFN MP RR+ V+Y +I G R A DLF KM +
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 321
Query: 54 ---SWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREVF 106
++ V++ + R +A L M + ++ ++ ++ ++ARE+
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 107 YQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVK- 157
QM K N I++N L+ Y G IE+A + + +L ++N L+ G+ K
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441
Query: 158 --RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWT 211
K +G K+ ++ + DVV++N++I G + G+ A L D+ D +T+T
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 212 AMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR 267
+M+ ++ ++EA FD + QK N + Y A++ GY ++ K+D A + E M S+
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 268 NV----SSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEA 319
N ++N +I G +G + +A L + M Q + +I + G ++ A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 320 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 379
+ F ++ G + T++ + T L + + ++ + G F ++L+
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 380 YFKCGSIGEANDVFEGIE-------EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 432
Y G +G+ N F+ ++ E ++ ++I +GKQ G
Sbjct: 682 Y---GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK----------GS 728
Query: 433 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 492
+P+ M ++ + L+++ E +SVTP++K Y +I + G L A+
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVE--------HSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 493 D----LMRNMPFEPPAASWGALLG-ASRIHGNTELGEKAAEMV-FKMEPHNSGMYVLLSN 546
+ RN P + ALL ++ + E + +M+ P VL+
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Query: 547 LY 548
LY
Sbjct: 841 LY 842
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 189/427 (44%), Gaps = 26/427 (6%)
Query: 179 WNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
+NT+++ A+ G + + K ++ + +++T+ MV+GY + G ++EA + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 235 Q----KNEISYNAMVAGYVQSNKMDMARELFEAMP----SRNVSSWNTMITGYGQNGDIA 286
+ + +Y +++ GY Q +D A ++F MP RN ++ +I G I
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 287 QARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 342
+A LF M +C ++ +I + EALN+ E++ G N T++ +
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 343 STCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVV 402
+ E +++ GQ+++ G NAL+ Y K G I +A DV E +E + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 403 ----SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEY 458
++N +I GY + K A+ V M V PD +T ++ +G D
Sbjct: 426 PNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 459 FYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASR 515
MN D + P YT MID L ++ R+EEA DL ++ P + AL+
Sbjct: 485 LSLMN-DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 516 IHGNTELGEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTG 574
G + E M+ K NS + L + A G+ +A + +M +G+Q
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 575 YSWVEVQ 581
+ +
Sbjct: 604 TDTILIH 610
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/546 (22%), Positives = 230/546 (42%), Gaps = 72/546 (13%)
Query: 19 RSSVSYNAMISGYLRNARFSLAR-DLFDKMPQ-----------RDLVSWNVMLTGYVRNR 66
R + Y +I Y SLAR L D+M Q ++ ++N M+ GY +
Sbjct: 174 RFELKYKLIIGCY-NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLG 232
Query: 67 RLGDAR----RLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWN 118
+ +A ++ ++ D ++ +++ GY Q D A +VF +MP K N +++
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT 292
Query: 119 GLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS 178
L+ RI+EA LF D E V +
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPT---------------------------VRT 325
Query: 179 WNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
+ +I S+A NL + ++ T+T ++ ++AR QM
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 235 QK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIA 286
+K N I+YNA++ GY + ++ A ++ E M SR +S ++N +I GY ++ ++
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVH 444
Query: 287 QARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 342
+A + + M +R D V++ ++I G ++G+++ A + + G ++ T++ +
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 343 STCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV- 401
+ +E + + + G + AL+ Y K G + EA+ + E + K+
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 402 ---VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEY 458
+++N +I G G K+A ++ E M IG++P T ++ G D
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 459 FYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG 518
F M P + YT I R GRL +A+D+M M S +S I G
Sbjct: 625 FQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM--RENGVSPDLFTYSSLIKG 681
Query: 519 NTELGE 524
+LG+
Sbjct: 682 YGDLGQ 687
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/520 (20%), Positives = 228/520 (43%), Gaps = 65/520 (12%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQRDLV----SWNVMLTGYVRN---RRLGDARRL 74
++YNA+I+GY + A D+ + M R L ++N ++ GY ++ + +G ++
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKM 453
Query: 75 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI----SWNGLLAAYVHNGRI 130
+ DVV++N+++ G ++G D A + M + + ++ ++ + + R+
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 131 EEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTM 182
EEAC LFDS + ++ + L+ G+ K + A + +KM ++ +++N +
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 183 ISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----P 234
I G DG + +A L ++ V T T ++ +++G D A + F QM
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 235 QKNEISYNAMVAGYVQSNKM----DMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARK 290
+ + +Y + Y + ++ DM ++ E S ++ +++++I GY GD+ Q
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY---GDLGQTNF 690
Query: 291 LFDMMPQ-RD--CV----SWAAIISGYAQTGH------------------YEEALNMFIE 325
FD++ + RD C ++ ++I + + ++ + + +
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCG 384
+ + N ++ + ++ L + +++ + + G V NALL K
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 385 SIGEANDVFEGI----EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 440
EA V + + + S +I G + G ++ VF+++ G DE+
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWK 870
Query: 441 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 480
++ GL++ E F M K+ SS+ Y+ +I+
Sbjct: 871 IIIDGVGKQGLVEAFYELFNVMEKN-GCKFSSQTYSLLIE 909
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 207/492 (42%), Gaps = 92/492 (18%)
Query: 4 GHCDS----ALRVFNTMPRRSS----VSYNAMISGYLRNARFSLARDLFDKMPQRDLV-- 53
G+C S A+ V N M R V+YN++I G R+ F A L M R LV
Sbjct: 437 GYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 54 --SWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFY 107
++ M+ +++R+ +A LFDS+ QK +VV + A++ GY + G DEA +
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 108 QMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGA 163
+M K N++++N L+ +G+++EA ++ KM+
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEA--------------------TLLEEKMV-- 594
Query: 164 ARKLFDKMHVRDVVSWNT-MISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYV 218
K+ ++ VS +T +I +DGD A + F Q D T+T + Y
Sbjct: 595 ------KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 219 QNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAM------PSRN 268
+ G L +A +M + + +Y++++ GY + + A ++ + M PS++
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 269 VSSWNTMIT-----GYG-QNGDIAQARKLFDMMPQRDCV----------------SWAAI 306
++ ++I YG Q G + + +MM V S+ +
Sbjct: 709 --TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Query: 307 ISGYAQTGHYEEALNMFIEIKR-DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 365
I G + G+ A +F ++R +G S + F+ LS C + ++ ++ G
Sbjct: 767 ILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Query: 366 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQAL 421
+ L+ +K G VF+ + + +D ++W +I G + G +
Sbjct: 827 HLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFY 886
Query: 422 MVFESMKTIGVK 433
+F M+ G K
Sbjct: 887 ELFNVMEKNGCK 898
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 219/456 (48%), Gaps = 40/456 (8%)
Query: 23 SYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
+YN +I+ + R ++ SLA L KM + +V+ + +L GY +R+ DA L D M
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 79 PQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRI 130
+ D +++ ++ G + A EA + +M + N +++ ++ G I
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 131 EEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTM 182
+ A L + +K + +++ +N ++ K + + A LF +M + +VV+++++
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 183 ISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-- 236
IS G S A L ++ + ++ T+ A++ +V+ G EA D M ++
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 237 --NEISYNAMVAGYVQSNKMDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARK 290
+ +YN+++ G+ +++D A+++FE M S++ + ++NT+I G+ ++ + +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 291 LFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
LF M R D V++ +I G G + A +F ++ DG + T+S L
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVV 402
+ LE ++ + K+ + ++ ++ K G + + D+F + K +VV
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 403 SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
++NTMI+G ++A + + MK G PD T
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 166/347 (47%), Gaps = 36/347 (10%)
Query: 5 HCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFS----LARDLFDKMPQRDLVSWN 56
H D AL +F M R + V+Y+++IS R+S L D+ +K +LV++N
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 259
Query: 57 VMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK 112
++ +V+ + +A +L D M ++ D+ ++N++++G+ + D+A+++F M K
Sbjct: 260 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 113 NAI----SWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRKMLGAA 164
+ ++N L+ + + R+E+ LF S L+ ++ L+ G A
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 165 RKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSG 216
+K+F +M D+++++ ++ G +G + +A +FD D++ +T M+ G
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 217 YVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAM----PSRN 268
+ G +D+ F + K N ++YN M++G + A L + M P +
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Query: 269 VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 315
++NT+I + ++GD A + +L M V A+ I A H
Sbjct: 500 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 546
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 178/417 (42%), Gaps = 31/417 (7%)
Query: 145 LISWNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFD 200
+ +N L+ K K L +KM ++ ++N +I+ + + +S A L
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 201 Q----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSN 252
+ + T +++++GY + +A DQM + + I++ ++ G N
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 253 KMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWA 304
K A L + M R N+ ++ ++ G + GDI A L + M + D V +
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 305 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 364
II + H ++ALN+F E++ G N T+S +S Q+ +++
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 365 GYETGCFVGNALLGMYFKCGSIGEA----NDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 420
NAL+ + K G EA +D+ + + D+ ++N++I G+ H +A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 421 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 480
+FE M + PD T ++ + ++ GTE F M+ + + YT +I
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVTYTTLIQ 368
Query: 481 LLGRAGRLEEAQDLMRNMPFE---PPAASWGALLGASRIHGNTELGEKAAEMVFKME 534
L G + AQ + + M + P ++ LL + N +L EKA E+ M+
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG--LCNNGKL-EKALEVFDYMQ 422
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 188/357 (52%), Gaps = 37/357 (10%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK 81
++Y +++G + R A+DLF ++P+ ++V +N ++ G+V + RL DA+ + M
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 82 -----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEE 132
DV ++N+++ GY + G A EV + M +K N S+ L+ + G+I+E
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 133 ACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMIS 184
A + + S L + +NCL+ F K + A ++F +M + DV ++N++IS
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 185 GYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQK 236
G + ++ A +++ + + T+ +++ +++ G + EAR ++M
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 237 NEISYNAMVAGYVQSNKMDMARELFEAM------PSRNVSSWNTMITGYGQNGDIAQARK 290
+EI+YN+++ G ++ ++D AR LFE M PS N+S N +I G ++G + +A +
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS-NISC-NILINGLCRSGMVEEAVE 620
Query: 291 LFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 343
M R D V++ ++I+G + G E+ L MF +++ +G + TF+ +S
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 231/492 (46%), Gaps = 69/492 (14%)
Query: 7 DSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKM----PQRDLVSWNVM 58
DSAL + M + +SV Y +I + R + A L ++M D ++N +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 59 LTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA 114
+ G + R+ +A ++ + M + D +++ +++G + G D A+++FY++P
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353
Query: 115 ISWNGLLAAYVHNGRIEEA-CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV 173
+ +N L+ +V +GR+++A L D + + + V
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI---------------------------V 386
Query: 174 RDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTF 229
DV ++N++I GY ++G + A + ++ +V+++T +V G+ + G +DEA
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 230 FDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQ 281
++M + N + +N +++ + + +++ A E+F MP + +V ++N++I+G +
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 282 NGDIAQARKLF-DMMPQ---RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 337
+I A L DM+ + + V++ +I+ + + G +EA + E+ G L+ T
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 338 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND-----V 392
++ + ++ + + ++++ G+ N L+ + G + EA + V
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 393 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG-- 450
G D+V++N++I G R G + L +F ++ G+ PD +T ++S G
Sbjct: 627 LRG-STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 451 -----LIDRGTE 457
L+D G E
Sbjct: 686 YDACLLLDEGIE 697
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 220/488 (45%), Gaps = 42/488 (8%)
Query: 54 SWNVMLTGYVRNRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREVFYQM 109
S+NV+L V A +F M + + ++ ++ + D A + M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 110 PH----KNAISWNGLLAAYVHNGRIEEACRLFDSK------SDWELISWNCLMGGFVKRK 159
N++ + L+ + R+ EA +L + D E ++N ++ G K
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE--TFNDVILGLCKFD 301
Query: 160 MLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 215
+ A K+ ++M +R D +++ +++G + G + AK+LF + P ++ + ++
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIH 361
Query: 216 GYVQNGMLDEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPSR--- 267
G+V +G LD+A+ M I +YN+++ GY + + +A E+ M ++
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 268 -NVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEALNM 322
NV S+ ++ G+ + G I +A + + M + + V + +IS + + EA+ +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 323 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 382
F E+ R G + TF+ +S ++ ++ + ++ G N L+ + +
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 383 CGSIGEAND-----VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
G I EA VF+G D +++N++I G R G +A +FE M G P I
Sbjct: 542 RGEIKEARKLVNEMVFQG-SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
+ +++ +G+++ E+ M S TP + +I+ L RAGR+E+ + R
Sbjct: 601 SCNILINGLCRSGMVEEAVEFQKEMVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 498 MPFE--PP 503
+ E PP
Sbjct: 660 LQAEGIPP 667
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 169/421 (40%), Gaps = 51/421 (12%)
Query: 226 ARTFFDQMPQK---NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITG 278
A F+D + +K ++ ++ + N++D A L M N + T+I
Sbjct: 202 ANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 261
Query: 279 YGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
+ + +A +L + M CV ++ +I G + EA M + G + +
Sbjct: 262 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 321
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
T+ ++ I ++ K + ++ K + N L+ + G + +A V
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTHGRLDDAKAVLS 377
Query: 395 GIEEK-----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 449
+ DV ++N++I GY + G AL V M+ G KP+ + ++
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437
Query: 450 GLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAAS 506
G ID M+ D + P++ + C+I + R+ EA ++ R MP +P +
Sbjct: 438 GKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 507 WGALLGASRIHGNTELGE-KAA-----EMVFKMEPHNSGMYVLLSNLYAASGRWADAGNM 560
+ +L I G E+ E K A +M+ + N+ Y L N + G +A +
Sbjct: 497 FNSL-----ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 561 RSRMRDVG--VQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVS 618
+ M G + ++T S ++ G C E D+ + E KM R+G+
Sbjct: 552 VNEMVFQGSPLDEITYNSLIK----------GLCRAGEVDKARSLFE----KMLRDGHAP 597
Query: 619 S 619
S
Sbjct: 598 S 598
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 219/456 (48%), Gaps = 40/456 (8%)
Query: 23 SYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
+YN +I+ + R ++ SLA L KM + +V+ + +L GY +R+ DA L D M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 79 PQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRI 130
+ D +++ ++ G + A EA + +M + N +++ ++ G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 131 EEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTM 182
+ A L + +K + +++ +N ++ K + + A LF +M + +VV+++++
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 183 ISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-- 236
IS G S A L ++ + ++ T+ A++ +V+ G EA +D M ++
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 237 --NEISYNAMVAGYVQSNKMDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARK 290
+ +YN++V G+ +++D A+++FE M S++ V ++NT+I G+ ++ + +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 291 LFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
LF M R D V++ +I G G + A +F ++ DG + T+S L
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVV 402
+ LE ++ + K+ + ++ ++ K G + + D+F + K +VV
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 403 SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
++NTMI+G ++A + + MK G P+ T
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 244/546 (44%), Gaps = 49/546 (8%)
Query: 1 MRNG----HCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL 52
+RNG D A+ +F M P S V +N ++S + +F + L +KM + ++
Sbjct: 57 LRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI 116
Query: 53 V----SWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEARE 104
V ++N+++ + R ++ A L M + +V+ +++L+GY +A
Sbjct: 117 VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 105 VFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFDSK----SDWELISWNCLMGGFV 156
+ QM + I++ L+ + + EA L D L+++ ++ G
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 157 KRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVF 208
KR A L +KM DVV +NT+I + + A NLF + + +V
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 209 TWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAM 264
T+++++S G +A M +K N +++NA++ +V+ K A +L++ M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 265 PSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHY 316
R++ ++N+++ G+ + + +A+++F+ M +DC V++ +I G+ ++
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 317 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 376
E+ +F E+ G + T++ + + +++ Q+V G + L
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 377 LGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 432
L G + +A +VF+ +++ D+ + TMI G + G +F S+ GV
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 433 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 492
KP+ +T ++S L+ M +D + P+S Y +I R G +
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASA 595
Query: 493 DLMRNM 498
+L+R M
Sbjct: 596 ELIREM 601
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 168/347 (48%), Gaps = 36/347 (10%)
Query: 5 HCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFS----LARDLFDKMPQRDLVSWN 56
H D AL +F M R + V+Y+++IS R+S L D+ +K +LV++N
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Query: 57 VMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK 112
++ +V+ + +A +L+D M ++ D+ ++N++++G+ + D+A+++F M K
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 113 N----AISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRKMLGAA 164
+ +++N L+ + + R+E+ LF S L+ ++ L+ G A
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 165 RKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSG 216
+K+F +M D+++++ ++ G +G + +A +FD D++ +T M+ G
Sbjct: 455 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 514
Query: 217 YVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAM----PSRN 268
+ G +D+ F + K N ++YN M++G + A L + M P N
Sbjct: 515 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 269 VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 315
++NT+I + ++GD A + +L M V A+ I A H
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 621
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 193/441 (43%), Gaps = 35/441 (7%)
Query: 125 VHNGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV--- 177
+H+ ++++A LF S+ ++ +N L+ K K L +KM ++V
Sbjct: 61 LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120
Query: 178 -SWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 232
++N +I+ + + +S A L + + T +++++GY + +A DQ
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 233 MPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGD 284
M + + I++ ++ G NK A L + M R N+ ++ ++ G + GD
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 285 IAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 340
A L + M + D V + II + H ++ALN+F E++ G N T+S
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 341 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK- 399
+S Q+ +++ NAL+ + K G EA +++ + ++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 400 ---DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 456
D+ ++N+++ G+ H +A +FE M + PD +T ++ + ++ GT
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 457 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE---PPAASWGALLGA 513
E F M+ + + YT +I L G + AQ + + M + P ++ LL
Sbjct: 421 ELFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 514 SRIHGNTELGEKAAEMVFKME 534
+ N +L EKA E+ M+
Sbjct: 480 --LCNNGKL-EKALEVFDYMQ 497
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 44/268 (16%)
Query: 3 NGHC-----DSALRVFNTMPRRSS----VSYNAMISGYLRNARFSLARDLFDKMPQR--- 50
NG C D A ++F M + V+YN +I G+ ++ R +LF +M R
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 51 -DLVSWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREV 105
D V++ ++ G + +A+++F M D+++++ +L G NG ++A EV
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 106 FYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL-------------ISWNCLM 152
F M K+ I L Y++ IE C+ W+L +++N ++
Sbjct: 493 FDYM-QKSEIK----LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 153 GGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 208
G +++L A L KM + + ++NT+I + +DGD + + L + F
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI-REMRSCRF 606
Query: 209 TWTAMVSGYVQNGMLDEAR---TFFDQM 233
A G V N ML + R +F D +
Sbjct: 607 VGDASTIGLVAN-MLHDGRLDKSFLDML 633
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 218/460 (47%), Gaps = 39/460 (8%)
Query: 16 MPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL----VSWNVMLTGYVRNRRLGDA 71
MP + +++N M+ + ++ +M +R++ V++N+++ G+ +N ++ +A
Sbjct: 235 MP--TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 72 RRLFDSMPQKDVV----SWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAA 123
RR M + S+N ++ GY + G D+A V +M + ++N + A
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 124 YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD----VVSW 179
GRI++A L S + +++S+N LM G++K A LFD + D +V++
Sbjct: 353 LCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
NT+I G + G++ A+ L ++ Q DV T+T +V G+V+NG L A +D+M +
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 236 K----NEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIA 286
K + +Y G ++ D A L E M + +++ +N I G + G++
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 287 QA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 342
+A RK+F + D V++ +I GY + G ++ A N++ E+ R + T+ +
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 343 STCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV- 401
A LE Q ++ K G NALL K G+I EA +EE+ +
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 652
Query: 402 ---VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
S+ +I+ ++ + +++ M ++PD T
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 159/347 (45%), Gaps = 46/347 (13%)
Query: 4 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD----LVSWNVML 59
G D A + ++M VSYN ++ GY++ +F A LFD + D +V++N ++
Sbjct: 357 GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 60 TGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 115
G + L A+RL + M + DV+++ ++ G+ +NG A EV+ +M K I
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK-GI 475
Query: 116 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 175
+G Y + R RL DS + L +M+ H D
Sbjct: 476 KPDG----YAYTTRAVGELRLGDSDKAFRL-----------HEEMVATDH------HAPD 514
Query: 176 VVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFD 231
+ +N I G + G++ +A + +F D T+T ++ GY++NG AR +D
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 232 QMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNG 283
+M +K + I+Y ++ G+ ++ +++ A + M R NV + N ++ G + G
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
Query: 284 DIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEI 326
+I +A + M + + S+ +IS +EE + ++ E+
Sbjct: 635 NIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEM 681
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 199/467 (42%), Gaps = 47/467 (10%)
Query: 145 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNL-- 198
+I++N ++ K L K++ +M R++ V++N +I+G++++G M +A+
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 199 ------FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGY 248
F +P +++ ++ GY + G+ D+A D+M +YN +
Sbjct: 298 DMRRSGFAVTP----YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 353
Query: 249 VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRD----CVSWA 304
++D AREL +M + +V S+NT++ GY + G +A LFD + D V++
Sbjct: 354 CDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413
Query: 305 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 364
+I G ++G+ E A + E+ + T++ + L + +++ ++++
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 365 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE--------KDVVSWNTMIAGYARHGF 416
G + G A +G+++ F EE D+ +N I G + G
Sbjct: 474 GIKPD---GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGN 530
Query: 417 GKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYT 476
+A+ + +G+ PD +T V+ G + M + + PS Y
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RLYPSVITYF 589
Query: 477 CMIDLLGRAGRLEEA---QDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 533
+I +AGRLE+A M+ P + ALL GN ++A + KM
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI---DEAYRYLCKM 646
Query: 534 E----PHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 576
E P N Y +L + +W + + M D ++ GY+
Sbjct: 647 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP-DGYT 692
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/567 (22%), Positives = 254/567 (44%), Gaps = 81/567 (14%)
Query: 3 NGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVS 54
+G D A + M R + V Y +I +L+N+RF A + +M ++ D+
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 55 WNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ-------NGYADEAR 103
+N ++ G + +R+ +AR M + + ++ A +SGY + + Y E R
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 104 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRK 159
E +P+K + GL+ Y G++ EAC + S D ++ ++ LM G K
Sbjct: 550 ECGV-LPNK--VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 160 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 219
+ A ++F +M + + DVF++ +++G+ +
Sbjct: 607 KVDDAEEIFREMRGKGIAP---------------------------DVFSYGVLINGFSK 639
Query: 220 NGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSS 271
G + +A + FD+M ++ N I YN ++ G+ +S +++ A+EL + M + N +
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIK 327
+ T+I GY ++GD+A+A +LFD M + D + ++ G + E A+ +F K
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE----TGCFVGNALLGMYFKC 383
+ G + + + F+ ++ EL ++ +++ ++ N ++ K
Sbjct: 760 K-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 384 GSIGEANDVFEGIEEKD----VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 439
G++ A ++F ++ + V+++ +++ GY + G + VF+ G++PD I
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 440 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH--YTCMIDLLG--RAGRLEEAQDLM 495
+++A G+ + M +V K TC L G + G +E A+ +M
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Query: 496 RNM---PFEPPAASWGALLGASRIHGN 519
NM + P +A+ L+ S I N
Sbjct: 939 ENMVRLQYIPDSATVIELINESCISSN 965
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 128/630 (20%), Positives = 258/630 (40%), Gaps = 126/630 (20%)
Query: 54 SWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGYAQNGYADEAREVFYQM 109
+++V++ G + +RL DA+ L M V +++ ++ G + AD A+ + ++M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 110 -PHKNAIS---WNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRKML 161
H I ++ + G +E+A LFD LI ++ L+ G+ + K +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 162 GAARKLFDKMHVRDVV----SWNTMISGYAQDGDMSQAKNLF------------------ 199
+L +M R++V ++ T++ G GD+ A N+
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 200 ---------------------DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-- 236
+Q D+F + +++ G + +DEAR+F +M +
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 237 --NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITG----YGQNGDIAQA-- 288
N +Y A ++GY+++++ A + + M V + TG Y + G + +A
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 289 --RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
R + D D ++ +++G + ++A +F E++ G + + ++ ++ +
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVV 402
+ ++ I ++V+ G + N LLG + + G I +A ++ + + K + V
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 403 SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSM 462
++ T+I GY + G +A +F+ MK G+ PD ++ C ++R F +
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 463 NK-------------------------------------DYSVTPSSKHYTCMIDLLGRA 485
K D P+ Y MID L +
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 486 GRLEEAQDL---MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM--VFK------ME 534
G LE A++L M+N P ++ +LL +G ++G + AEM VF +E
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLL-----NGYDKMGRR-AEMFPVFDEAIAAGIE 872
Query: 535 PHNSGMYVLLSNLYAASGRWADAGNMRSRM 564
P + MY ++ N + G A + +M
Sbjct: 873 PDHI-MYSVIINAFLKEGMTTKALVLVDQM 901
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 131/617 (21%), Positives = 248/617 (40%), Gaps = 87/617 (14%)
Query: 82 DVVSWNAMLSGYAQNGYADEAREVFYQ------MPHKN--------AISWNGL-LAAYVH 126
D V + + GY GY +EA VF +P + + WN L L V+
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 127 NGRIEEACRLFDSKSDWELISWNCLMGG--------FVKRKM-------LGAARKLFDKM 171
G +E +FD K+ LI +C G F K + A KL + M
Sbjct: 210 KGMVERNV-VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268
Query: 172 HVRDVV----SWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGML 223
+ +V +++ +I G + + AK+L + D T++ ++ G ++
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
Query: 224 DEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNV----SSWNTM 275
D A+ +M Y+ + + M+ A+ LF+ M + + ++ ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 276 ITGYGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNMFIEIKRDGE 331
I GY + ++ Q +L M +R+ V ++ ++ G +G + A N+ E+ G
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
N ++ + T + ++ ++ + G F N+L+ K + EA
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 392 -VFEGIE---EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
+ E +E + + ++ I+GY A + M+ GV P+++ G+++
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM---PFEPPA 504
G + + SM D + +K YT +++ L + ++++A+++ R M P
Sbjct: 569 KKGKVIEACSAYRSM-VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 505 ASWGALLGASRIHGNTELG--EKAA----EMVFKMEPHNSGMYVLLSNLYAASGRWADAG 558
S+G L I+G ++LG +KA+ EMV + N +Y +L + SG A
Sbjct: 628 FSYGVL-----INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 559 NMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAF--LEELDLKMRREGY 616
+ M G+ N + T+ D + D AF +E+ LK
Sbjct: 683 ELLDEMSVKGLH----------PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 617 VSSTKLV-----LHDVE 628
T LV L+DVE
Sbjct: 733 FVYTTLVDGCCRLNDVE 749
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 81/112 (72%)
Query: 596 EKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAG 655
++ + Y L+ L ++R GYV TK VLHD++EE KE L +HSE+LA+AFGI+ P G
Sbjct: 128 DRSKAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPG 187
Query: 656 RPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 707
IRV+KNLR+C DCHN IK +S I R II+RD+ RFHHF +G CSCGDYW
Sbjct: 188 TTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 204/455 (44%), Gaps = 75/455 (16%)
Query: 21 SVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFD 76
+ ++N +I G + S A L D+M Q D+V++N ++ G R+ A L
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLR 217
Query: 77 SMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNG 128
M ++ DV +++ ++ ++G D A +F +M K + +++N L+ G
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 129 RIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWN 180
+ + L E+ I++N L+ FVK L A +L+ +M R +++++N
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337
Query: 181 TMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 236
T++ GY +S+A N+ D D+ T+T+++ GY +D+ F + ++
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 237 ----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQA 288
N ++Y+ +V G+ QS K+ +A ELF+ M S +V ++ ++ G NG + +A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 289 RKLFDMMPQRD----CVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 344
++F+ + + V + II G + G E+A N+F + G N T++ +S
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS- 516
Query: 345 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----KD 400
G+ K GS+ EAN + +EE +
Sbjct: 517 ---------------------------------GLCKK-GSLSEANILLRKMEEDGNAPN 542
Query: 401 VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 435
++NT+I + R G + + E MK+ G D
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/539 (20%), Positives = 228/539 (42%), Gaps = 67/539 (12%)
Query: 7 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVM 58
D A+ +F M P S V ++ S R +F+L D ++ ++ + N+M
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 59 LTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA 114
+ + R + A + + + D ++N ++ G G EA + +M
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM----- 184
Query: 115 ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR 174
+E C+ +++++N ++ G + A L KM R
Sbjct: 185 ---------------VENGCQ-------PDVVTYNSIVNGICRSGDTSLALDLLRKMEER 222
Query: 175 ----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEA 226
DV +++T+I +DG + A +LF + + V T+ ++V G + G ++
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 282
Query: 227 RTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITG 278
M + N I++N ++ +V+ K+ A EL++ M +R N+ ++NT++ G
Sbjct: 283 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Query: 279 YGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 334
Y +++A + D+M + C V++ ++I GY ++ + +F I + G N
Sbjct: 343 YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402
Query: 335 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 394
T+S + ++L +++ ++V G LL G + +A ++FE
Sbjct: 403 AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
Query: 395 GIEEKD----VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 450
+++ +V + T+I G + G + A +F S+ GVKP+ +T ++S G
Sbjct: 463 DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 451 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAAS 506
+ M +D + P+ Y +I R G L + L+ M F A+S
Sbjct: 523 SLSEANILLRKMEEDGN-APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 9/297 (3%)
Query: 276 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 335
I ++ IA +++ P V ++ S A+T + L+ +++ +G + N
Sbjct: 64 IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123
Query: 336 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 395
T + ++ + G+V+K GYE N L+ F G + EA + +
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 396 IEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 451
+ E DVV++N+++ G R G AL + M+ VK D T ++ + G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 452 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM---PFEPPAASWG 508
ID F M + + S Y ++ L +AG+ + L+++M P ++
Sbjct: 244 IDAAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 509 ALLGASRIHGN-TELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 564
LL G E E EM+ + N Y L + Y R ++A NM M
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 102/219 (46%), Gaps = 48/219 (21%)
Query: 4 GHC-----DSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMPQR---- 50
G+C D ++VF + +R ++V+Y+ ++ G+ ++ + LA +LF +M
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 51 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD----VVSWNAMLSGYAQNGYADEAREVF 106
D++++ ++L G N +L A +F+ + + +V + ++ G + G ++A +F
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 107 YQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLG 162
+P K N +++ +++ G + EA N L+
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEA---------------NILL---------- 531
Query: 163 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 201
RK+ + + + ++NT+I + +DGD++ + L ++
Sbjct: 532 --RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 183/354 (51%), Gaps = 33/354 (9%)
Query: 23 SYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
SYN +I+ R +RF +A + KM + D+V+ + ++ G+ + R+ DA L M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 79 PQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRI 130
+ DVV +N ++ G + G ++A E+F +M +A+++N L+A +GR
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 131 EEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTM 182
+A RL ++ I++ ++ FVK A KL+++M R DV ++N++
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 183 ISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-- 236
I+G G + +AK + D + DV T+ +++G+ ++ +DE F +M Q+
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 237 --NEISYNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARKLFD 293
+ I+YN ++ GY Q+ + D A+E+F M SR N+ +++ ++ G N + +A LF+
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 294 MMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 343
M + D ++ +I G + G+ E+A ++F + G + +++ +S
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 213/465 (45%), Gaps = 72/465 (15%)
Query: 7 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ----RDLVSWNVMLTGY 62
D ++ + P S V ++ ++S ++ + L LF M DL S+N+++
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 63 VRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPH----KNA 114
R R A + M + DVV+ +++++G+ Q +A ++ +M +
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 115 ISWNGLLAAYVHNGRIEEACRLFDSKSD----WELISWNCLMGGFVKRKMLGAARKLFDK 170
+ +N ++ G + +A LFD + +++N L+ G A +L
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 171 MHVRDVV----SWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGM 222
M +RD+V ++ +I + ++G S+A L+++ + DVFT+ ++++G +G
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 223 LDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNT 274
+DEA+ D M K + ++YN ++ G+ +S ++D +LF M R + ++NT
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDCV-SWAAIISGYAQTGHYEEALNMFIEIKRDGESL 333
+I GY Q G A+++F M R + +++ ++ G E+AL +F +++ L
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
+ +T++ IHG C +GN + +A D+F
Sbjct: 415 DITTYNIV---------------IHGM---------CKIGN-----------VEDAWDLF 439
Query: 394 EGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 434
+ K DVVS+ TMI+G+ R ++ +++ M+ G+ P
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 152/302 (50%), Gaps = 54/302 (17%)
Query: 4 GHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV----SW 55
G + A+ +F+ M R +V+YN++++G + R+S A L M RD+V ++
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
++ +V+ + +A +L++ M ++ DV ++N++++G +G DEA+++ M
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 112 K----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKL 167
K + +++N L+ + + R++E +LF R++
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLF---------------------------REM 340
Query: 168 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ-SPHQDVFTWTAMVSGYVQNGMLDEA 226
+ V D +++NT+I GY Q G A+ +F + ++ T++ ++ G N +++A
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 227 RTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMIT 277
F+ M QK+EI +YN ++ G + ++ A +LF ++ + +V S+ TMI+
Sbjct: 401 LVLFENM-QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 278 GY 279
G+
Sbjct: 460 GF 461
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 123/284 (43%), Gaps = 13/284 (4%)
Query: 240 SYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFDMM 295
SYN ++ + ++ +A + M +V + +++I G+ Q + A L M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 296 PQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
+ D V + II G + G +A+ +F ++RDG + T++ ++
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 352 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTM 407
++ +V A++ ++ K G EA ++E + + DV ++N++
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 408 IAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 467
I G HG +A + + M T G PD +T +++ + +D GT+ F M +
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ-RG 344
Query: 468 VTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 511
+ + Y +I +AGR + AQ++ M P ++ LL
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILL 388
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 40/199 (20%)
Query: 3 NGHCDSALRVFNTMPRRSS----VSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVM 58
+G D A ++ + M + V+YN +I+G+ ++ R LF +M QR LV
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG---- 347
Query: 59 LTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK-NAISW 117
D +++N ++ GY Q G D A+E+F +M + N ++
Sbjct: 348 -----------------------DTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTY 384
Query: 118 NGLLAAYVHNGRIEEACRLFDS--KSDWEL--ISWNCLMGGFVKRKMLGAARKLFDKMHV 173
+ LL N R+E+A LF++ KS+ EL ++N ++ G K + A LF +
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 174 R----DVVSWNTMISGYAQ 188
+ DVVS+ TMISG+ +
Sbjct: 445 KGLKPDVVSYTTMISGFCR 463
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 128/288 (44%), Gaps = 9/288 (3%)
Query: 290 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
K+ P V ++ ++S A++ +Y+ +++F ++ G + +++ ++ +
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----KDVVSWN 405
+ + G+++K GYE ++L+ + + + +A D+ +EE DVV +N
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 406 TMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKD 465
T+I G + G A+ +F+ M+ GV+ D +T +++ +G M
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM- 237
Query: 466 YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASRIHGNTEL 522
+ P+ +T +ID+ + G+ EA L M +P ++ +L+ +HG +
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 523 GEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 569
++ + MV K + Y L N + S R + + M G+
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/511 (22%), Positives = 226/511 (44%), Gaps = 79/511 (15%)
Query: 24 YNAMISGYLRNARFSLARDLFDKMPQRDL----VSWNVMLTGYVRNRRLGDAR----RLF 75
YNA+I + +F A LFD+M + L V++++++ + R +L A +
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 76 DSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIE 131
D+ + V +N++++G+ + G A +M +K +++ L+ Y G+I
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 132 EACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMI 183
+A RL+ + + ++ L+ G + ++ A KLF++M +V V++N MI
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 184 SGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQ 235
GY ++GDMS+A K + ++ D +++ ++ G G EA+ F D + +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 236 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS------------------------- 270
NEI Y ++ G+ + K++ A + + M R V
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 669
Query: 271 --------------SWNTMITGYGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQ 312
+ +MI + GD +A ++D+M CV ++ A+I+G +
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 313 TGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA-LELGKQIHGQVVKTGYETGCF 371
G EA + +++ N+ T+ C L ++ ++H ++K G
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTA 788
Query: 372 VGNALLGMYFKCGSIGEANDVF-----EGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 426
N L+ + + G I EA+++ +G+ D +++ TMI R K+A+ ++ S
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVS-PDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 427 MKTIGVKPDEITMVGVLSACSHAGLIDRGTE 457
M G++PD + ++ C AG + + TE
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 116/568 (20%), Positives = 221/568 (38%), Gaps = 125/568 (22%)
Query: 37 FSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK-----DVVSWNAMLS 91
F++ ++K S+++++ YVR+RR+ D +F M K +V + +A+L
Sbjct: 141 FNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH 200
Query: 92 GYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD------------- 138
G + + A E+F M +S Y++ G I C L D
Sbjct: 201 GLVKFRHFGLAMELFNDM-----VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 139 SKSDWELISWNCLMGGFVKRK----MLGAARKLFDKMHVRDVVSWNTMISGYA------- 187
+ D ++ +N L+ G K++ +G + L K DVV++ T++ G
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 188 ----------------------------QDGDMSQAKNL------FDQSPHQDVFTWTAM 213
+ G + +A NL F SP ++F + A+
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP--NLFVYNAL 373
Query: 214 VSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMAR----ELFEAMP 265
+ + EA FD+M + N+++Y+ ++ + + K+D A E+ +
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 266 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRD----CVSWAAIISGYAQTGHYEEALN 321
+V +N++I G+ + GDI+ A M + V++ +++ GY G +AL
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 322 MFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYF 381
++ E+ G + + TF+ LL F
Sbjct: 494 LYHEMTGKGIAPSIYTFT-----------------------------------TLLSGLF 518
Query: 382 KCGSIGEANDVFEGIEEKDV----VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
+ G I +A +F + E +V V++N MI GY G +A + M G+ PD
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
+ ++ G + ++K + + YT ++ R G+LEEA + +
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKG-NCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 498 MP---FEPPAASWGALLGASRIHGNTEL 522
M + +G L+ S H + +L
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 207/491 (42%), Gaps = 44/491 (8%)
Query: 117 WNGLLAAYVHNGRIEEACRLFD---SKSDW--ELISWNCLMGGFVKRKMLGAARKLFDKM 171
++ L+ YV + R+ + +F +K E+ + + L+ G VK + G A +LF+ M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 172 ---HVR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGML 223
+R DV + +I + D+S+AK + ++ + ++ G + +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 224 DEARTFFDQMPQKN----EISYNAMVAGYVQSNKMDMARELFEAMP----SRNVSSWNTM 275
EA + K+ ++Y +V G + + ++ E+ + M S + ++ +++
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 276 ITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 331
+ G + G I +A +++ D + + A+I + + EA +F + + G
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN- 390
N T+S + L+ G++V TG + + N+L+ + K G I A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 391 ---DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
++ E VV++ +++ GY G +AL ++ M G+ P T +LS
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 448 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPA 504
AGLI + F M +++V P+ Y MI+ G + +A + ++ M P
Sbjct: 519 RAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 505 ASWGALLGASRIHGNTELGEKAAEMVFKMEPH------NSGMYVLLSNLYAASGRWADAG 558
S+ L IHG G+ + VF H N Y L + + G+ +A
Sbjct: 578 YSYRPL-----IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 559 NMRSRMRDVGV 569
++ M GV
Sbjct: 633 SVCQEMVQRGV 643
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/535 (23%), Positives = 240/535 (44%), Gaps = 67/535 (12%)
Query: 2 RNGHCDSALRVFNTM-----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DL 52
+N D AL VF M + SYN +++ ++ ++ LF +L
Sbjct: 90 KNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNL 149
Query: 53 VSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQ 108
++NV++ + + AR D M ++ DV S++ +++ A+ G D+A E+F +
Sbjct: 150 QTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 109 MPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLF 168
M + ++ +N L+ GF+K K A +L+
Sbjct: 210 MSERGVAP---------------------------DVTCYNILIDGFLKEKDHKTAMELW 242
Query: 169 DKMH-----VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQ 219
D++ +V + N MISG ++ G + ++++ +D++T+++++ G
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 220 NGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMP---SRNVSSW 272
G +D+A + F+++ ++ + ++YN M+ G+ + K+ + EL+ M S N+ S+
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSY 362
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKR 328
N +I G +NG I +A ++ +MP + D ++ I G G+ +AL + E++
Sbjct: 363 NILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 329 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 388
G L+ ++ + LE + ++ K G E V NAL+G + +GE
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482
Query: 389 ANDVFEGIEEK----DVVSWNTMIAGYARHG-FGKQALMVFESMKTIGVKPDEITMVGVL 443
A+ + + VVS+N +I G + G FG+ + V E ++ G KPD T +L
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDLKTYSILL 541
Query: 444 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
ID E ++ + T H +I L G+L++A +M NM
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMH-NILIHGLCSVGKLDDAMTVMANM 595
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/512 (21%), Positives = 231/512 (45%), Gaps = 76/512 (14%)
Query: 2 RNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV---- 53
+ G D AL +F+ M R YN +I G+L+ A +L+D++ + V
Sbjct: 196 KAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNV 255
Query: 54 -SWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREVFYQ 108
+ N+M++G + R+ D ++++ M Q KD+ ++++++ G G D+A VF +
Sbjct: 256 KTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315
Query: 109 MPHKNA----ISWNGLLAAYVHNGRIEEAC---RLFDSKSDWELISWNCLMGGFVKRKML 161
+ + A +++N +L + G+I+E+ R+ + K+ ++S+N L+ G ++ +
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKI 375
Query: 162 GAA----RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP----HQDVFTWTAM 213
A R + K + D ++ I G +G +++A + + H DV+ + ++
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 214 VSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 269
+ + L+EA +M + N NA++ G ++ +++ A M
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM----- 490
Query: 270 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
G+NG + VS+ +I G + G + EA E+ +
Sbjct: 491 ----------GKNG------------CRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 330 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 389
G + T+S L ++L ++ Q +++G ET + N L+ G + +A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 390 NDVFEGIEEKD----VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI---TMVGV 442
V +E ++ +V++NT++ G+ + G +A +++ M +G++PD I T++
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648
Query: 443 LSACSHAGLIDRGTEY---FYSMNKDYSVTPS 471
L C RG Y F+ +++ + P+
Sbjct: 649 LCMC-------RGVSYAMEFFDDARNHGIFPT 673
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 43/218 (19%)
Query: 18 RRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARR 73
R + VSYN +I G + +F A +M + DL +++++L G R+R++ A
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 74 LFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGR 129
L+ Q DV+ N ++ G G D+A V M H+N +
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA------------- 602
Query: 130 IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISG 185
L+++N LM GF K A ++ M+ D++S+NT++ G
Sbjct: 603 --------------NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648
Query: 186 YAQDGDMSQAKNLFDQSPHQDVF----TWTAMVSGYVQ 219
+S A FD + + +F TW +V V
Sbjct: 649 LCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 179/354 (50%), Gaps = 24/354 (6%)
Query: 176 VVSWNTMISGYAQDGDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQNGM-LDEARTFF 230
V +++ +IS Y + G +A ++F+ ++ T+ A++ + GM + FF
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 231 DQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQN 282
D+M Q + I++N+++A + + AR LF+ M +R +V S+NT++ +
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 283 GDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
G + A ++ MP + + VS++ +I G+A+ G ++EALN+F E++ G +L+R ++
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 339 SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE 398
+ LS + E I ++ G + NALLG Y K G E VF ++
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 399 KDV----VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR 454
+ V ++++T+I GY++ G K+A+ +F K+ G++ D + ++ A GL+
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 455 GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMR--NMPFEPPAAS 506
M K+ ++P+ Y +ID GR+ ++ + D ++PF A S
Sbjct: 568 AVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALS 620
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 201/450 (44%), Gaps = 58/450 (12%)
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
+ M++ R ++ A+R+F++ V +++A++S Y ++G +EA VF M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 112 ----KNAISWNGLLAAYVHNG-RIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLG 162
N +++N ++ A G ++ + FD + I++N L+ + +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 163 AARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMV 214
AAR LFD+M R DV S+NT++ + G M A + Q P + +V +++ ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 215 SGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNK----MDMARELFEAMPS 266
G+ + G DEA F +M + +SYN +++ Y + + +D+ RE+
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 267 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNM 322
++V ++N ++ GYG+ G + +K+F M + + ++++ +I GY++ G Y+EA+ +
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 323 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 382
F E K G + +S + + + ++ K G N+++ + +
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 383 CGSIGEANDVFEG---------------IEEKDVVSWNTMIAGYARHGFGKQA------- 420
++ + D G E V+ + + + K
Sbjct: 597 SATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQEL 656
Query: 421 ---LMVFESMKTIGVKPDEITMVGVLSACS 447
L VF M + +KP+ +T +L+ACS
Sbjct: 657 SCILEVFRKMHQLEIKPNVVTFSAILNACS 686
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 194/432 (44%), Gaps = 51/432 (11%)
Query: 2 RNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNA-RFSLARDLFDKMP----QRDL 52
R+G + A+ VFN+M R + V+YNA+I + F FD+M Q D
Sbjct: 280 RSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDR 339
Query: 53 VSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQ 108
+++N +L R AR LFD M ++DV S+N +L + G D A E+ Q
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQ 399
Query: 109 MPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFVK--- 157
MP K N +S++ ++ + GR +EA LF + +S+N L+ + K
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR 459
Query: 158 -RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTA 212
+ L R++ +DVV++N ++ GY + G + K +F + + V T++
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519
Query: 213 MVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMP--- 265
++ GY + G+ EA F + + + + Y+A++ ++ + A L + M
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 266 -SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 324
S NV ++N++I +G++ + ++ + + S A + E N I
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRSADYSN--------GGSLPFSSSALSALTETEGNRVI 631
Query: 325 EI--KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 382
++ + ES NR+T C LE+ +++H +K T +A+L +
Sbjct: 632 QLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVT----FSAILNACSR 687
Query: 383 CGSIGEANDVFE 394
C S +A+ + E
Sbjct: 688 CNSFEDASMLLE 699
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 181/363 (49%), Gaps = 57/363 (15%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDS 77
+++N++++ R + AR+LFD+M R D+ S+N +L + ++ A +
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQ 399
Query: 78 MPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGR 129
MP K +VVS++ ++ G+A+ G DEA +F +M + + +S+N LL+ Y GR
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR 459
Query: 130 IEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKM---HV-RDVVSWNT 181
EEA + + +++++N L+GG+ K+ +K+F +M HV ++++++T
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519
Query: 182 MISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK- 236
+I GY++ G +A +F + DV ++A++ +NG++ A + D+M ++
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 237 ---NEISYNAMVAGYVQSNKMDMARELF---------EAMPSRNVSSWNTMITGYGQ--- 281
N ++YN+++ + +S MD + + A+ + + N +I +GQ
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTT 639
Query: 282 ------NGDIAQA-----------RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 324
D + RK+ + + + V+++AI++ ++ +E+A +
Sbjct: 640 ESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLE 699
Query: 325 EIK 327
E++
Sbjct: 700 ELR 702
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 372 VGNALLGMYFKCGSIGEANDVFE----GIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 427
+ +A++ + G + A +FE G V +++ +I+ Y R G ++A+ VF SM
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 428 KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGR 487
K G++P+ +T V+ AC G+ + F+ + V P + ++ + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 488 LEEAQDL---MRNMPFEPPAASWGALLGASRIHGNTELG-EKAAEMVFKMEPHNSGMYVL 543
E A++L M N E S+ LL A G +L E A+M K N Y
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 544 LSNLYAASGRWADAGNMRSRMRDVGV 569
+ + +A +GR+ +A N+ MR +G+
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGI 440
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 10/242 (4%)
Query: 339 SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE 398
S +ST + + K+I GY + +AL+ Y + G EA VF ++E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 399 ----KDVVSWNTMIAGYARHGFG-KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 453
++V++N +I + G KQ F+ M+ GV+PD IT +L+ CS GL +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 454 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE---PPAASWGAL 510
F M + + Y ++D + + G+++ A +++ MP + P S+ +
Sbjct: 357 AARNLFDEMT-NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 511 L-GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 569
+ G ++ E EM + + Y L ++Y GR +A ++ M VG+
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 570 QK 571
+K
Sbjct: 476 KK 477
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 207/458 (45%), Gaps = 75/458 (16%)
Query: 21 SVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFD 76
+V +N +++G R S A +L D+M + L++ N ++ G N ++ DA L D
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 77 SMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAAYVHNG 128
M Q + V++ +L+ ++G A E+ +M +N A+ ++ ++ +G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 129 RIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWN 180
++ A LF+ ++I++N L+GGF KL M R +VV+++
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 181 TMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQK 236
+I + ++G + +A L + + + T+ +++ G+ + L+EA D M K
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 237 ----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQA 288
+ +++N ++ GY ++N++D ELF M R N ++NT++ G+ Q+G + A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 289 RKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 344
+KLF M R D VS+ ++ G G E+AL +F +I++ L+ +
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII--- 514
Query: 345 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----D 400
IHG NA + +A D+F + K D
Sbjct: 515 ------------IHGMC------------NA--------SKVDDAWDLFCSLPLKGVKLD 542
Query: 401 VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
++N MI+ R +A ++F M G PDE+T
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/518 (21%), Positives = 224/518 (43%), Gaps = 62/518 (11%)
Query: 84 VSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIE---EACRL 136
+S+ LS AD+A ++F M P I +N L +A + E C+
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 137 FDSKSDWELI-SWNCLMGGFVKRKMLGAARKLFDKM----HVRDVVSWNTMISGYAQDGD 191
+SK I + + ++ F + + L A K+ + D V +NT+++G +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 192 MSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNA 243
+S+A L D+ + T +V+G NG + +A D+M Q NE++Y
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 244 MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 303
++ +S + +A EL M RN+ + D V +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNI---------------------------KLDAVKY 266
Query: 304 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 363
+ II G + G + A N+F E++ G + T++ + + + G ++ ++K
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 364 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV----VSWNTMIAGYARHGFGKQ 419
+ L+ + K G + EA+ + + + ++ + +++N++I G+ + ++
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 420 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 479
A+ + + M + G PD +T +++ A ID G E F M+ V ++ Y ++
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL-RGVIANTVTYNTLV 445
Query: 480 DLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 536
++G+LE A+ L + M P S+ LL + N EL EKA E+ K+E
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG--LCDNGEL-EKALEIFGKIEKS 502
Query: 537 ----NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
+ G+Y+++ + + + DA ++ + GV+
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 132/296 (44%), Gaps = 66/296 (22%)
Query: 1 MRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMPQR----DL 52
++ G A ++ M +R ++++YN++I G+ + R A + D M + D+
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 53 VSWNVMLTGYVRNRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREVFYQ 108
+++N+++ GY + R+ D LF M + V V++N ++ G+ Q+G + A+++F +
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 109 MPHK----NAISWNGLLAAYVHNGRIEEACRLFD------------------------SK 140
M + + +S+ LL NG +E+A +F SK
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523
Query: 141 SD--WELI-------------SWNCLMGGFVKRKMLGAA----RKLFDKMHVRDVVSWNT 181
D W+L ++N ++ ++ L A RK+ ++ H D +++N
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNI 583
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQM 233
+I + D D + A L ++ DV T MV + +G LD ++F D +
Sbjct: 584 LIRAHLGDDDATTAAELIEEMKSSGFPADVST-VKMVINMLSSGELD--KSFLDML 636
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 179/354 (50%), Gaps = 36/354 (10%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQ----RDLVSWNVMLTGYVRNRRLGDARRLFDS 77
V+ ++++G+ R R S A L DKM + D+V++N ++ + +R+ DA F
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 78 MPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGR 129
+ +K +VV++ A+++G + +A + M K N I+++ LL A+V NG+
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 130 IEEACRLFDS----KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNT 181
+ EA LF+ D ++++++ L+ G + A ++FD M + DVVS+NT
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 182 MISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMP--- 234
+I+G+ + + LF + + + T+ ++ G+ Q G +D+A+ FF QM
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 235 -QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQAR 289
+ +YN ++ G + +++ A +FE M R ++ ++ T+I G + G + +A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 290 KLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 339
LF + + D V++ ++SG G E ++ ++K++G N T S
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 209/439 (47%), Gaps = 36/439 (8%)
Query: 63 VRNRRLGDARRLFDSM----PQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNA 114
+R+ +L DA LF M P +V +N +LS + D + +M +
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 115 ISWNGLLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK 170
++N ++ + ++ A ++ + + ++ L+ GF +R + A L DK
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 171 M----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGM 222
M + D+V++N +I + ++ A + F + + +V T+TA+V+G +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 223 -LDEARTFFDQMPQK---NEISYNAMVAGYVQSNKMDMARELFEAMP----SRNVSSWNT 274
D AR D + +K N I+Y+A++ +V++ K+ A+ELFE M ++ ++++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 275 MITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
+I G + I +A ++FD+M + C VS+ +I+G+ + E+ + +F E+ + G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 331 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 390
N T++ + ++ ++ Q+ G + N LLG G + +A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 391 DVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
+FE ++++ D+V++ T+I G + G ++A +F S+ G+KPD +T ++S
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 447 SHAGLIDRGTEYFYSMNKD 465
GL+ + M ++
Sbjct: 481 CTKGLLHEVEALYTKMKQE 499
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 202/454 (44%), Gaps = 94/454 (20%)
Query: 18 RRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARR 73
R ++N +I+ + + SLA + KM + D V+ ++ G+ R R+ DA
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 74 LFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYV 125
L D M + D+V++NA++ + ++A + F ++ K N +++ L+
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 126 HNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 185
++ R +A RL + +K+K+ +V++++ ++
Sbjct: 237 NSSRWSDAARL---------------LSDMIKKKI------------TPNVITYSALLDA 269
Query: 186 YAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----N 237
+ ++G + +AK LF++ S D+ T++++++G + +DEA FD M K +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 238 EISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFD 293
+SYN ++ G+ ++ +++ +LF M R N ++NT+I G+ Q GD+ +A++ F
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 294 MMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
M D ++ ++ G G E+AL +F ++++ L+ T++
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV-------- 441
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWN 405
I G K G + EA +F + K D+V++
Sbjct: 442 -------IRGMC--------------------KTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 406 TMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 439
TM++G G + ++ MK G+ ++ T+
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 47/256 (18%)
Query: 1 MRNGHCDSALRVFNTMPRRSS----VSYNAMISGYLRNARFSLARDLFDKMPQR----DL 52
++NG A +F M R S V+Y+++I+G + R A +FD M + D+
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 53 VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVS----WNAMLSGYAQNGYADEAREVFYQ 108
VS+N ++ G+ + +R+ D +LF M Q+ +VS +N ++ G+ Q G D+A+E F Q
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 109 MP----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 164
M + ++N LL NG +E+A +F+ KR+M
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ---------------KREM---- 431
Query: 165 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQN 220
D+V++ T+I G + G + +A +LF + D+ T+T M+SG
Sbjct: 432 --------DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 221 GMLDEARTFFDQMPQK 236
G+L E + +M Q+
Sbjct: 484 GLLHEVEALYTKMKQE 499
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 168/381 (44%), Gaps = 34/381 (8%)
Query: 162 GAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 221
G R+ K +RD+ N I ++ DM +++ P + + ++S V+
Sbjct: 50 GDLRERLSKTRLRDI-KLNDAIDLFS---DMVKSR------PFPSIVDFNRLLSAIVKLK 99
Query: 222 MLDEARTFFDQMPQ---KNEI-SYNAMVAGYVQSNKMDMARELFEAM------PSRNVSS 271
D + +M +N++ ++N ++ + ++ +A + M P R +
Sbjct: 100 KYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDR--VT 157
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQ----RDCVSWAAIISGYAQTGHYEEALNMFIEIK 327
+++ G+ + ++ A L D M + D V++ AII +T +A + F EI+
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 387
R G N T++ ++ + + ++ ++K +ALL + K G +
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 388 EANDVFEGIE----EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 443
EA ++FE + + D+V+++++I G H +A +F+ M + G D ++ ++
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 444 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF--- 500
+ A ++ G + F M++ + ++ Y +I +AG +++AQ+ M F
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 501 EPPAASWGALLGASRIHGNTE 521
P ++ LLG +G E
Sbjct: 397 SPDIWTYNILLGGLCDNGELE 417
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 122/571 (21%), Positives = 251/571 (43%), Gaps = 80/571 (14%)
Query: 7 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ----RDLVSWNVM 58
D A+ +F M P S V ++ ++S + +F L L ++M +L +++++
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 59 LTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMP---- 110
+ + R +L A + M + D+V+ N++L+G+ +A + QM
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 111 HKNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARK 166
++ ++N L+ + R EA L D +L+++ ++ G KR + A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 167 LFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYV 218
L KM VV +NT+I +++ A NLF + ++ +V T+ +++
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 219 QNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS---- 270
G +A M ++ N ++++A++ +V+ K+ A +L++ M R++
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEI 326
+++++I G+ + + +A+ +F++M +DC V++ +I G+ + +E + +F E+
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
+ G N T++ IHG +F+
Sbjct: 423 SQRGLVGNTVTYT---------------TLIHG--------------------FFQAREC 447
Query: 387 GEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 442
A VF+ + D+++++ ++ G +G + AL+VFE ++ ++PD T +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 443 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 502
+ AG ++ G + F S++ V P+ YT M+ R G EEA L R M E
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 503 PAASWGALLGASRIHGNTELGEKAAEMVFKM 533
P G R H +AE++ +M
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 164/330 (49%), Gaps = 38/330 (11%)
Query: 7 DSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVM 58
+ AL +F M R + V+YN++I R+S A L M +R ++V+++ +
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 59 LTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK-- 112
+ +V+ +L +A +L+D M ++ D+ +++++++G+ + DEA+ +F M K
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 113 --NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRKMLGAARK 166
N +++N L+ + R++E LF S L+ ++ L+ GF + + A+
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Query: 167 LFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYV 218
+F +M + D+++++ ++ G +G + A +F+ D++T+ M+ G
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 219 QNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAM----PSRNVS 270
+ G +++ F + K N ++Y M++G+ + + A LF M P +
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDC 300
++NT+I + ++GD A + +L M R C
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREM--RSC 600
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 139/627 (22%), Positives = 274/627 (43%), Gaps = 63/627 (10%)
Query: 2 RNGHCDSALRVFNTMPRRSSV----SYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNV 57
R G D AL +F + V S M++ + + R L D FDK+ + + V
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGV 217
Query: 58 MLTGYVRN---------RRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 108
G+V + + L R + + + +VS N +L G + + +R +
Sbjct: 218 SAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLV 277
Query: 109 M---PHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFVKRKML 161
+ P N +++ L+ + G ++ A LF + +LI+++ L+ G+ K ML
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 162 GAARKLFDK-MHV---RDVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAM 213
G KLF + +H DVV +++ I Y + GD++ A K + Q +V T+T +
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 214 VSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR-- 267
+ G Q+G + EA + Q+ ++ + ++Y++++ G+ + + L+E M
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 268 --NVSSWNTMITGYGQNGDIAQARKL-FDMMPQR---DCVSWAAIISGYAQTGHYEEALN 321
+V + ++ G + G + A + M+ Q + V + ++I G+ + ++EAL
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 322 MFIEIKRDGESLNRSTFSCALST-------CADIAALELGKQIHGQVVKTGYETGCFVGN 374
+F + G + +TF+ + C + +G Q+ + + V N
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCN 576
Query: 375 ALLGMYFKCGSIGEA----NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 430
++ + FKC I +A N++ EG E D+V++NTMI GY +A +FE +K
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 636
Query: 431 GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEE 490
P+ +T+ ++ +D G +S+ + P++ Y C++D ++ +E
Sbjct: 637 PFGPNTVTLTILIHVLCKNNDMD-GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695
Query: 491 AQDLMRNMP---FEPPAASWGALLGA----SRIHGNTELGEKAAEMVFKMEPHNSGMYVL 543
+ L M P S+ ++ R+ T + +A + K+ P + Y +
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA--KLLP-DVVAYAI 752
Query: 544 LSNLYAASGRWADAGNMRSRMRDVGVQ 570
L Y GR +A + M GV+
Sbjct: 753 LIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/507 (21%), Positives = 219/507 (43%), Gaps = 81/507 (15%)
Query: 12 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRR 67
V + P + V++ +I+G+ + A DLF M QR DL++++ ++ GY +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 68 LGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNG 119
LG +LF K DVV +++ + Y ++G A V+ +M + N +++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 120 LLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM---- 171
L+ +GRI EA ++ + +++++ L+ GF K L + L++ M
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 172 HVRDVVSWNTMISGYAQDGDMSQAK----NLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
+ DVV + ++ G ++ G M A + QS +V + +++ G+ + DEA
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 228 TFFDQMP----------------------------------------QKNEISYNAMVAG 247
F M Q+N+IS + V
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 576
Query: 248 YV-----QSNKMDMARELF----EAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR 298
V + ++++ A + F E ++ ++NTMI GY + +A ++F+++
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 636
Query: 299 ----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 354
+ V+ +I + + A+ MF + G N T+ C + + +E
Sbjct: 637 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 696
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF-EGIEEK---DVVSWNTMIAG 410
++ ++ + G + ++ K G + EA ++F + I+ K DVV++ +I G
Sbjct: 697 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756
Query: 411 YARHGFGKQALMVFESMKTIGVKPDEI 437
Y + G +A +++E M GVKPD++
Sbjct: 757 YCKVGRLVEAALLYEHMLRNGVKPDDL 783
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 252/550 (45%), Gaps = 50/550 (9%)
Query: 8 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVS----WNVMLTGYV 63
+ + F + + S + M+ Y R AR+ F++M R + + ++ Y
Sbjct: 296 AVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYA 355
Query: 64 RNRRLGDA----RRLFDSMPQKDVVSWNAMLSGYAQNGYA-------DEAREVFYQMPHK 112
R + +A R++ + + +V+++ ++ G+++ G+A DEA+ + +
Sbjct: 356 VGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL--- 412
Query: 113 NAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGFV----KRKMLGAA 164
NA + ++ A+ +E A L + D + ++ +M G+ ++K L
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 165 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQN 220
++L + VV++ +I+ Y + G +S+A + + ++ ++ T++ M++G+V+
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 221 GMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSW 272
A F+ M ++ + I YN +++ + MD A + + M ++
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 273 NTMITGYGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNMFIEIKR 328
+I GY ++GD+ ++ ++FDMM + CV ++ +I+G + E+A+ + E+
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 329 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 388
G S N T++ + A + + ++ G + F ALL K G +
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 389 ANDVFEGIEEKDV----VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 444
A V + + +++ +N +I G+AR G +A + + MK GVKPD T +S
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 445 ACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA---QDLMRNMPFE 501
ACS AG ++R T+ M V P+ K YT +I RA E+A + M+ M +
Sbjct: 773 ACSKAGDMNRATQTIEEMEA-LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 502 PPAASWGALL 511
P A + LL
Sbjct: 832 PDKAVYHCLL 841
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 106/551 (19%), Positives = 230/551 (41%), Gaps = 55/551 (9%)
Query: 57 VMLTGYVRNRRLGDARRLFDSMPQKDVVSW-------NAMLSGYAQNGYADEAREVFYQM 109
V G + +L D +RL Q+ V W M + + + + +R+ ++
Sbjct: 229 VEFHGRILTVKLDDGKRLKTKAEQR--VRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRI 286
Query: 110 PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 169
N +W +++A F+ S + ++ + +R + AR+ F+
Sbjct: 287 LDTNGDNWQAVISA-------------FEKISKPSRTEFGLMVKFYGRRGDMHRARETFE 333
Query: 170 KMHVRDVVS----WNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNG 221
+M R + + ++I YA DM +A + + ++ + T++ +V G+ + G
Sbjct: 334 RMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAG 393
Query: 222 MLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS----WN 273
+ A +FD+ + N Y ++ + Q+ M+ A L M + + ++
Sbjct: 394 HAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYH 453
Query: 274 TMITGYGQNGDIAQARKLFDMMPQRDC------VSWAAIISGYAQTGHYEEALNMFIEIK 327
TM+ GY D + +F + ++C V++ +I+ Y + G +AL + +K
Sbjct: 454 TMMDGYTMVADEKKGLVVFKRL--KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 387
+G N T+S ++ + + +VK G + + N ++ + G++
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 388 EANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 443
A + +++ ++ +I GYA+ G +++L VF+ M+ G P T G++
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 444 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID---LLGRAGRLEEAQDLMRNMPF 500
+ +++ E M V+ + YT ++ +G G+ E ++N
Sbjct: 632 NGLVEKRQMEKAVEILDEMTLA-GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 501 EPPAASWGALLGASRIHGNTELGEKAA-EMVFKMEPHNSGMYVLLSNLYAASGRWADAGN 559
+ ++ ALL A G + EM + P NS +Y +L + +A G +A +
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 560 MRSRMRDVGVQ 570
+ +M+ GV+
Sbjct: 751 LIQQMKKEGVK 761
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/542 (20%), Positives = 236/542 (43%), Gaps = 67/542 (12%)
Query: 21 SVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFD 76
+V Y +ISG + F A D ++M ++V+++ +L G + ++LG +R+ +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 77 SM------PQKDVVSWNAMLSGYAQNG---YADEAREVFYQMPHKNAISWNGLLAAYVHN 127
M P + +N+++ Y +G YA + + + H +L +
Sbjct: 362 MMMMEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 128 GRIEEACRLFD--SKSDWELIS-------------WNCLMGGFVKRKMLGAARKLFDKMH 172
+ C L D K+ E+++ CL K R++ +
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 173 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQNGMLDEART 228
+ D +++ +++ M A LF++ DV+T+T MV + + G++++AR
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 229 FFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYG 280
+F++M + N ++Y A++ Y+++ K+ A ELFE M S N+ +++ +I G+
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 281 QNGDIAQARKLFDMM------PQRD--------------CVSWAAIISGYAQTGHYEEAL 320
+ G + +A ++F+ M P D V++ A++ G+ ++ EEA
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 321 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 380
+ + +G N+ + + + L+ +++ ++ + G+ + ++L+ Y
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 381 FKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDE 436
FK A+ V + E +VV + MI G + G +A + + M+ G +P+
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 437 ITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMR 496
+T ++ G I+ E M V P+ Y +ID + G L+ A +L+
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 497 NM 498
M
Sbjct: 839 EM 840
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 189/440 (42%), Gaps = 51/440 (11%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDS 77
V+Y A+I YL+ + S A +LF+ M ++V+++ ++ G+ + ++ A ++F+
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 78 MP-QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL 136
M KDV + Y N N +++ LL + + R+EEA +L
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNS------------ERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 137 FDSKS----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGY-- 186
D+ S + I ++ L+ G K L A+++ +M + +++++I Y
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 187 --AQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEIS 240
QD + + S +V +T M+ G + G DEA M +K N ++
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 241 YNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMP 296
Y AM+ G+ K++ EL E M S+ V+ ++ +I +NG + A L + M
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Query: 297 QRDCVSWAAIISGYAQT-----GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 351
Q W +GY + + E+L + EI +D + S + + L
Sbjct: 842 Q---THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 352 ELGKQIHGQVVKTGYETGCFVG--NALLGMYFKCGSIGEANDVFEGIEEKDVV----SWN 405
E+ ++ +V + N+L+ + A +F + +K V+ S+
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 958
Query: 406 TMIAGYARHGFGKQALMVFE 425
++I G R+ +AL++ +
Sbjct: 959 SLIKGLFRNSKISEALLLLD 978
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 111/578 (19%), Positives = 227/578 (39%), Gaps = 84/578 (14%)
Query: 25 NAMISGYLRNARFSLARDLFDKM------PQRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
N ++ + RN FS+A + ++ P R ++N ++ +++ RL A S+
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRS--TYNCLIQAFLKADRLDSA-----SL 256
Query: 79 PQKDVVSWNAMLSGYAQNGYADEA------REVFYQMPHKN----AISWNGLLAAYVHNG 128
+++ N + G+ +A RE + +N + + L++
Sbjct: 257 IHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEAS 316
Query: 129 RIEEAC----RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS----WN 180
EEA R+ + +++++ L+ G + +K LG +++ + M + +N
Sbjct: 317 LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFN 376
Query: 181 TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML-----DEARTFFDQMPQ 235
+++ Y GD S A L + + GYV +L + + +
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKK------MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLD 430
Query: 236 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQ-NGDIAQARKLFDM 294
E +Y+ M+A V NK+ NVSS+ + G+ + R++
Sbjct: 431 LAEKAYSEMLAAGVVLNKI-------------NVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 295 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 354
D +++ +++ E A +F E+KR G + T++ + + +E
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 355 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAG 410
++ ++ + G AL+ Y K + AN++FE + + ++V+++ +I G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 411 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 470
+ + G ++A +FE M PD + ++ D S P
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPD--------------------VDMYFKQYDDNSERP 637
Query: 471 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPF---EPPAASWGALL-GASRIHGNTELGEKA 526
+ Y ++D ++ R+EEA+ L+ M EP + AL+ G ++ E E
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 527 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 564
EM P Y L + Y R A + S+M
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/541 (21%), Positives = 239/541 (44%), Gaps = 50/541 (9%)
Query: 1 MRNGHCD----SALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP---- 48
+RNG D A+ +F +M P + + +N + S R ++ L M
Sbjct: 42 LRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI 101
Query: 49 QRDLVSWNVMLTGYVRNRRLGDA----RRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 104
+ D+ + +M+ Y R ++L A R + + D ++++ +++G+ G EA
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 161
Query: 105 VFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELISWNCLMGGFV 156
+ +M + ++ + L+ GR+ EA L D ++ + +++ ++
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 221
Query: 157 KRKMLGAARKLFDKMHVRD----VVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVF 208
K A LF KM R+ VV ++ +I +DG A +LF++ + DV
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281
Query: 209 TWTAMVSGYVQNGMLDEARTFFDQMPQKNEI----SYNAMVAGYVQSNKMDMARELFEAM 264
T+++++ G +G D+ +M +N I +++A++ +V+ K+ A+EL+ M
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 265 PSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHY 316
+R ++ ++N++I G+ + + +A ++FD+M + C V+++ +I+ Y +
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 317 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 376
++ + +F EI G N T++ + L K++ ++V G L
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 377 LGMYFKCGSIGEANDVFEGIEEKDVV----SWNTMIAGYARHGFGKQALMVFESMKTIGV 432
L G + +A ++FE +++ + +N +I G A +F S+ GV
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 433 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL-LGRAGRLEEA 491
KPD +T ++ G + F M +D TP Y +I LG +G +
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED-GCTPDDFTYNILIRAHLGGSGLISSV 580
Query: 492 Q 492
+
Sbjct: 581 E 581
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 209/458 (45%), Gaps = 94/458 (20%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQRDL----VSWNVMLTGYVRNRRLGDARRLFDS 77
V+Y +++ ++ +LA DLF KM +R++ V +++++ ++ DA LF+
Sbjct: 211 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 78 MPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA 133
M K DVV++++++ G +G D+ ++ +M +N I
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP----------------- 313
Query: 134 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQD 189
++++++ L+ FVK L A++L+++M R D +++N++I G+ ++
Sbjct: 314 ----------DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 190 GDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISY 241
+ +A +FD + D+ T++ +++ Y + +D+ F ++ K N I+Y
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 242 NAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQ 297
N +V G+ QS K++ A+ELF+ M SR +V ++ ++ G NG++ +A ++F+ M +
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 298 RDCV----SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALEL 353
+ II G ++A ++F C+LS
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLF----------------CSLSD--------- 518
Query: 354 GKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----KDVVSWNTMIA 409
K + VV N ++G K GS+ EA+ +F ++E D ++N +I
Sbjct: 519 -KGVKPDVVTY---------NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
+ ++ + E MK G D T+ V+ S
Sbjct: 569 AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/446 (18%), Positives = 176/446 (39%), Gaps = 112/446 (25%)
Query: 175 DVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFF 230
D ++++T+++G+ +G +S+A L D+ D+ T + +++G G + EA
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 231 DQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIA 286
D+M Q +E++Y ++ +S +A +LF M RN+ +
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA--------------- 243
Query: 287 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 346
V ++ +I + G +++AL++F E++ G + T+S +
Sbjct: 244 ------------SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 347 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 406
+ + G ++ +++ G ++ DVV+++
Sbjct: 292 NDGKWDDGAKMLREMI----------GRNII---------------------PDVVTFSA 320
Query: 407 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA-----CSH------------- 448
+I + + G +A ++ M T G+ PD IT ++ C H
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 449 -----------------AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 491
A +D G F ++ + P++ Y ++ ++G+L A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 492 QDLMRNMP---FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNS----GMYVLL 544
++L + M P ++G LL + N EL KA E+ KM+ G+Y ++
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDG--LCDNGEL-NKALEIFEKMQKSRMTLGIGIYNII 496
Query: 545 SNLYAASGRWADAGNMRSRMRDVGVQ 570
+ + + DA ++ + D GV+
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVK 522
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 135/322 (41%), Gaps = 17/322 (5%)
Query: 285 IAQARKLFDMM----PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 340
+ A LF+ M P + + + S A+T Y+ L ++ +G + T +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 341 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA----NDVFEGI 396
++ L + G+ K GYE + L+ + G + EA + + E
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 397 EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 456
+ D+V+ +T+I G G +AL++ + M G +PDE+T VL+ +G
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 457 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA---SWGALLGA 513
+ F M ++ ++ S Y+ +ID L + G ++A L M + A ++ +L+G
Sbjct: 231 DLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 514 SRIHGNTELGEKAA-EMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 572
G + G K EM+ + + + L +++ G+ +A + + M G+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 573 TGYSWVEVQNKIHKFTVGDCFH 594
T + + I F +C H
Sbjct: 350 T----ITYNSLIDGFCKENCLH 367
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 127/532 (23%), Positives = 216/532 (40%), Gaps = 96/532 (18%)
Query: 2 RNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLV 53
R G D L VF+ MP RS SY A+I+ Y RN R+ + +L D+M ++
Sbjct: 153 REGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSIL 212
Query: 54 SWNVMLTGYVR-----NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 108
++N ++ R LG + Q D+V++N +LS A G DEA VF
Sbjct: 213 TYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRT 272
Query: 109 MPHKNAI----SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 164
M + +++ L+ + R+E+ C L + GG
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS----------GG---------- 312
Query: 165 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------SPHQDVFTWTAMVSGYV 218
+ D+ S+N ++ YA+ G + +A +F Q +P+ + T++ +++ +
Sbjct: 313 -------SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN--TYSVLLNLFG 363
Query: 219 QNGMLDEARTFFDQMPQKNE----ISYNAMVAGYVQSNKMDMARELFEAMPSRNVS---- 270
Q+G D+ R F +M N +YN ++ + + LF M N+
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNMFIEI 326
++ +I G+ G ARK+ M D V ++ +I + Q YEEAL F +
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 327 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 386
G + + TF L + A ++ + I ++V +G I
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG--------------------I 523
Query: 387 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 446
D F N I Y + G ++A+ + M+ PDE T+ VLS
Sbjct: 524 PRNRDTF-----------NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVY 572
Query: 447 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
S A L+D E F M K + PS Y M+ + G+ R ++ +L+ M
Sbjct: 573 SFARLVDECREQFEEM-KASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 152/363 (41%), Gaps = 58/363 (15%)
Query: 186 YAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----K 236
+A GD ++ LF Q + +T M+S + G+LD+ FD+MP +
Sbjct: 115 FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 237 NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNG-DIAQARKL 291
+ SY A++ Y ++ + + + EL + M + +S ++NT+I + G D L
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 292 FDMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 347
F M Q D V++ ++S A G +EA +F + G + +T+S + T
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 348 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE---------- 397
+ LE + G++ G N LL Y K GSI EA VF ++
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT 354
Query: 398 -----------------------------EKDVVSWNTMIAGYARHGFGKQALMVFESMK 428
+ D ++N +I + G+ K+ + +F M
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 429 TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 488
++PD T G++ AC GL + + M + + PSSK YT +I+ G+A
Sbjct: 415 EENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALY 473
Query: 489 EEA 491
EEA
Sbjct: 474 EEA 476
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 185/433 (42%), Gaps = 34/433 (7%)
Query: 109 MPHKNAISWNGLL--AAYVHNGRIEEACRL-FDSKSDWELISWNCLMGGFVKRKMLGAAR 165
+P+ N+ + L+ ++++ N R + RL F S + + S++ + K +LG
Sbjct: 5 IPNPNSHHLSFLIQNSSFIGNRRFADGNRLRFLSGGNRKPCSFSGKIKAKTKDLVLGNPS 64
Query: 166 KLFDK-MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLD 224
+K + DV S +S G +++ ++F + F + + G
Sbjct: 65 VSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFAL--VFKEFAGRGDWQ 122
Query: 225 EARTFFDQMPQK-----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTM 275
+ F M ++ NE Y M++ + +D E+F+ MPS+ VS S+ +
Sbjct: 123 RSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTAL 182
Query: 276 ITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTG-HYEEALNMFIEIKRDG 330
I YG+NG + +L D M +++ +I+ A+ G +E L +F E++ +G
Sbjct: 183 INAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 242
Query: 331 ESLNRSTFSCALSTCA-----DIAALELGKQIHGQVVK--TGYETGCFVGNALLGMYFKC 383
+ T++ LS CA D A + G +V T Y L + C
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC 302
Query: 384 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 443
+GE + G D+ S+N ++ YA+ G K+A+ VF M+ G P+ T +L
Sbjct: 303 DLLGE---MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 444 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM---PF 500
+ +G D + F M K + P + Y +I++ G G +E L +M
Sbjct: 360 NLFGQSGRYDDVRQLFLEM-KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 501 EPPAASWGALLGA 513
EP ++ ++ A
Sbjct: 419 EPDMETYEGIIFA 431
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 141/314 (44%), Gaps = 21/314 (6%)
Query: 266 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 325
S +V S ++ G IA+ +F + +A + +A G ++ +L +F
Sbjct: 73 SYDVESLINKLSSLPPRGSIARCLDIFK--NKLSLNDFALVFKEFAGRGDWQRSLRLFKY 130
Query: 326 IKRD-GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 384
++R N ++ +S L+ ++ ++ G F AL+ Y + G
Sbjct: 131 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 190
Query: 385 SIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALM-VFESMKTIGVKPDEITM 439
+ ++ + ++ + ++++NT+I AR G + L+ +F M+ G++PD +T
Sbjct: 191 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 250
Query: 440 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 499
+LSAC+ GL D F +MN D + P Y+ +++ G+ RLE+ DL+ M
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 500 FE---PPAASWGALLGASRIHGNTELGEKAAEMVF-KMEP----HNSGMYVLLSNLYAAS 551
P S+ LL A G+ K A VF +M+ N+ Y +L NL+ S
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSI----KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQS 365
Query: 552 GRWADAGNMRSRMR 565
GR+ D + M+
Sbjct: 366 GRYDDVRQLFLEMK 379
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/520 (22%), Positives = 231/520 (44%), Gaps = 51/520 (9%)
Query: 7 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVM 58
D A+ +F M PR + ++ + S R ++ L DL +M + +L + ++M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 59 LTGYVRNRRLGDARRLFDSMP-------QKDVVSWNAMLSGYAQNGYADEAREV---FYQ 108
+ R R+L A F +M + D V+++ +++G G EA E+ +
Sbjct: 114 INCCCRCRKLSLA---FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 109 MPHK-NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGA 163
M HK I+ N L+ NG++ +A L D + +++ ++ K
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 164 ARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVS 215
A +L KM R D V ++ +I G +DG + A NLF++ + D+ +T ++
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 216 GYVQNGMLDE-ARTFFDQMPQK---NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS- 270
G+ G D+ A+ D + +K + ++++A++ +V+ K+ A EL + M R +S
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 271 ---SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMF 323
++ ++I G+ + + +A + D+M + C ++ +I+GY + ++ L +F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 324 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 383
++ G + T++ + ++ LE+ K++ ++V LL
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 384 GSIGEANDVFEGIE----EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 439
G +A ++FE IE E D+ +N +I G A +F S+ GVKPD T
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 440 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 479
++ G + F M +D +P+ Y +I
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGH-SPNGCTYNILI 569
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/484 (20%), Positives = 218/484 (45%), Gaps = 63/484 (13%)
Query: 4 GHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSW 55
G AL + + M + + ++ NA+++G N + S A L D+M Q + V++
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
+L ++ + A L M ++ D V ++ ++ G ++G D A +F +M
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 112 K----NAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLGA 163
K + I + L+ + + GR ++ +L K ++++++ L+ FVK L
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 164 ARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVS 215
A +L +M R D V++ ++I G+ ++ + +A ++ D + ++ T+ +++
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 216 GYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS 271
GY + ++D+ F +M + + ++YN ++ G+ + K+++A+ELF+ M SR V
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV-- 453
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 331
+ D VS+ ++ G G E+AL +F +I++
Sbjct: 454 -------------------------RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 332 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 391
L+ ++ + + + ++ + + G + N ++G K GS+ EA+
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 392 VFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
+F +EE + ++N +I + G ++ + E +K G D T+ V+ S
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608
Query: 448 HAGL 451
L
Sbjct: 609 DGRL 612
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 48/220 (21%)
Query: 3 NGHC-----DSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMPQR--- 50
NG+C D L +F M R +V+YN +I G+ + +A++LF +M R
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 51 -DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREV 105
D+VS+ ++L G N A +F+ + + D+ +N ++ G D+A ++
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 106 FYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 165
F +P K K D + ++N ++GG K+ L A
Sbjct: 515 FCSLPLKGV-------------------------KPDVK--TYNIMIGGLCKKGSLSEAD 547
Query: 166 KLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 201
LF KM H + ++N +I + +GD +++ L ++
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 117/282 (41%), Gaps = 39/282 (13%)
Query: 296 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 355
P+ + ++ + S A+T Y+ L++ +++ G + N T S ++ C L L
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 356 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----KDVVSWNTMIAGY 411
G+++K GYE + L+ G + EA ++ + + E +++ N ++ G
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 412 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 471
+G A+++ + M G +P+E+T VL +G E M ++ +
Sbjct: 188 CLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLD 246
Query: 472 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 531
+ Y+ +ID L + G L+ A +L M + G KA ++
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIK---------------------GFKADIII- 284
Query: 532 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVT 573
Y L + +GRW D + +RD+ +K+T
Sbjct: 285 ---------YTTLIRGFCYAGRWDDGAKL---LRDMIKRKIT 314
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 143/655 (21%), Positives = 277/655 (42%), Gaps = 90/655 (13%)
Query: 2 RNGHCDSALRVFNTMPRRSSV----SYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNV 57
R G D AL +F + V S M++ + + R L D FDK+ + + V
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGV 217
Query: 58 MLTGYVRN---------RRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 108
G+V + + L R + + + +VS N +L G + + +R +
Sbjct: 218 SAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLV 277
Query: 109 M---PHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFVKRKML 161
+ P N +++ L+ + G ++ A LF + +LI+++ L+ G+ K ML
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 162 GAARKLFDK-MHV---RDVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAM 213
G KLF + +H DVV +++ I Y + GD++ A K + Q +V T+T +
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 214 VSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR-- 267
+ G Q+G + EA + Q+ ++ + ++Y++++ G+ + + L+E M
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 268 --NVSSWNTMITGYGQNGDIAQARKL-FDMMPQR---DCVSWAAIISGYAQTGHYEEALN 321
+V + ++ G + G + A + M+ Q + V + ++I G+ + ++EAL
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 322 MFIEIKRDGESLNRSTFSC-----------------------------ALSTCADIAAL- 351
+F + G + +TF+ AL+ C I A
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 352 -----ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA----NDVFEGIEEKDVV 402
+G Q+ + + V N ++ + FKC I +A N++ EG E D+V
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 403 SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSM 462
++NTMI GY +A +FE +K P+ +T+ ++ +D G +S+
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD-GAIRMFSI 696
Query: 463 NKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGA----SR 515
+ P++ Y C++D ++ +E + L M P S+ ++ R
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 756
Query: 516 IHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
+ T + +A + K+ P + Y +L Y GR +A + M GV+
Sbjct: 757 VDEATNIFHQAIDA--KLLP-DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 110/536 (20%), Positives = 221/536 (41%), Gaps = 110/536 (20%)
Query: 12 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRR 67
V + P + V++ +I+G+ + A DLF M QR DL++++ ++ GY +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 68 LGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNG 119
LG +LF K DVV +++ + Y ++G A V+ +M + N +++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 120 LLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM---- 171
L+ +GRI EA ++ + +++++ L+ GF K L + L++ M
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 172 HVRDVVSWNTMISGYAQDGDMSQAK----------------------------NLFDQS- 202
+ DVV + ++ G ++ G M A N FD++
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 203 ----------PHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGY 248
DV T+T ++ + G L+EA F +M + + ++Y ++ +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 249 VQSNKMDMARELFEAMPSRNVS-------------------------------------- 270
+ K + +LF+ M +S
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636
Query: 271 -SWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIE 325
++NTMI GY + +A ++F+++ + V+ +I + + A+ MF
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 696
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 385
+ G N T+ C + + +E ++ ++ + G + ++ K G
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 756
Query: 386 IGEANDVF-EGIEEK---DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
+ EA ++F + I+ K DVV++ +I GY + G +A +++E M GVKPD++
Sbjct: 757 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 143/631 (22%), Positives = 282/631 (44%), Gaps = 77/631 (12%)
Query: 3 NGHCDSAL----RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFD-KMPQRDLVSW-- 55
+G DS L F P +S A + G + +F LA FD M Q+D S
Sbjct: 113 SGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLD 172
Query: 56 ----NVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFY 107
++++ + R+ A +F+ + + DV S+ +++S +A +G EA VF
Sbjct: 173 NSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFK 232
Query: 108 QMPH----KNAISWNGLLAAYVHNGRI-EEACRLFDS-KSDW---ELISWNCLMGGFVKR 158
+M I++N +L + G + L + KSD + ++N L+ +
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRG 292
Query: 159 KMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQ------SPHQDVF 208
+ A ++F++M D V++N ++ Y + +A + ++ SP +
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP--SIV 350
Query: 209 TWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAM 264
T+ +++S Y ++GMLDEA +QM +K + +Y +++G+ ++ K++ A +FE M
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 265 PS----RNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHY 316
+ N+ ++N I YG G + K+FD + D V+W +++ + Q G
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 317 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 376
E +F E+KR G R TF+ +S + + E ++ +++ G N +
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 377 LGMYFKCGSIGEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQ-ALM--VFESMKT 429
L + G ++ V +E+ + +++ +++ YA GK+ LM + E + +
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN---GKEIGLMHSLAEEVYS 587
Query: 430 IGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE 489
++P + + ++ CS L+ F + K+ +P M+ + GR +
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL-KERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 490 EAQ---DLMRNMPFEPPAASWGALL---GASRIHGNTELGEKAAEMVFK-MEP----HNS 538
+A D M+ F P A++ +L+ S G +E E E++ K ++P +N+
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE--EILREILAKGIKPDIISYNT 704
Query: 539 GMYVLLSNLYAASGRWADAGNMRSRMRDVGV 569
+Y Y + R DA + S MR+ G+
Sbjct: 705 VIYA-----YCRNTRMRDASRIFSEMRNSGI 730
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/528 (20%), Positives = 237/528 (44%), Gaps = 45/528 (8%)
Query: 23 SYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSM 78
+YN +I+ R + A +F++M D V++N +L Y ++ R +A ++ + M
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 79 P----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRI 130
+V++N+++S YA++G DEA E+ QM K + ++ LL+ + G++
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 131 EEACRLFDSKSDWELISWNCLMGGFVK----RKMLGAARKLFDKMHV----RDVVSWNTM 182
E A +F+ + C F+K R K+FD+++V D+V+WNT+
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 183 ISGYAQDGDMSQAKNLFDQ------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM--- 233
++ + Q+G S+ +F + P ++ T+ ++S Y + G ++A T + +M
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 234 -PQKNEISYNAMVAGYVQSNKMDMARELFEAMP----SRNVSSWNTMITGYGQNGDI--- 285
+ +YN ++A + + + ++ M N ++ +++ Y +I
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578
Query: 286 -AQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 344
+ A +++ + + V ++ ++ EA F E+K G S + +T + +S
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 345 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----D 400
+ + + + G+ N+L+ M+ + G++ ++ I K D
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 401 VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFY 460
++S+NT+I Y R+ + A +F M+ G+ PD IT + + + + +
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 461 SMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 508
M K + P+ Y ++D + R +EA+ + ++ P A G
Sbjct: 759 YMIK-HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKG 805
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 20 SSVSYNAMISGYLRNARF----SLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLF 75
S +YN+++ + R+A F + R++ K + D++S+N ++ Y RN R+ DA R+F
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 76 DSMPQ----KDVVSWNAMLSGYAQNGYADEAREVF-YQMPH---KNAISWNGLLAAYVHN 127
M DV+++N + YA + +EA V Y + H N ++N ++ Y
Sbjct: 723 SEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Query: 128 GRIEEACRLF 137
R +EA +LF
Sbjct: 783 NRKDEA-KLF 791
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 221/475 (46%), Gaps = 66/475 (13%)
Query: 22 VSYNAMISGYLRNAR-FSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFD 76
+SYNA++ +R+ R S A ++F +M + ++ ++N+++ G+ + A LFD
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 77 SMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNG 128
M K +VV++N ++ GY + D+ ++ M K N IS+N ++ G
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 129 RIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAARKLFDKM----HVRDVVSWN 180
R++E + + + +++N L+ G+ K A + +M V+++
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349
Query: 181 TMISGYAQDGDMSQAKNLFDQ------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 234
++I + G+M++A DQ P++ T+T +V G+ Q G ++EA +M
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER--TYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 235 QK----NEISYNAMVAGYVQSNKMDMARELFEAMP----SRNVSSWNTMITGYGQNGDIA 286
+ ++YNA++ G+ + KM+ A + E M S +V S++T+++G+ ++ D+
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 287 QA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 342
+A R++ + + D ++++++I G+ + +EA +++ E+ R G + T++ +
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 343 STCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF--------- 393
+ LE Q+H ++V+ G + L+ K EA +
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 394 -------------EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 435
IE K VVS +I G+ G +A VFESM KPD
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVS---LIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/539 (20%), Positives = 247/539 (45%), Gaps = 65/539 (12%)
Query: 4 GHCDSALRVFNTMPRR----SSVSYNAMISGYLRNAR----FSLARDLFDKMPQRDLVSW 55
G+ D AL +F+ M + + V+YN +I GY + + F L R + K + +L+S+
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
NV++ G R R+ + + M ++ D V++N ++ GY + G +A + +M
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 112 ----KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRKMLGA 163
+ I++ L+ + G + A D L ++ L+ GF ++ +
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 164 ARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVS 215
A ++ +M+ VV++N +I+G+ G M A +++ ++ DV +++ ++S
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 216 GYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS- 270
G+ ++ +DEA +M +K + I+Y++++ G+ + + A +L+E M +
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 271 ---SWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMF 323
++ +I Y GD+ +A +L + M ++ D V+++ +I+G + EA +
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 324 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 383
+++ + + T+ + C++I + I G +K
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK-------------------- 618
Query: 384 GSIGEANDVFEGI----EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 439
G + EA+ VFE + + D ++N MI G+ R G ++A +++ M G +T+
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 440 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
+ ++ A G ++ + + ++ ++ ++++ R G ++ D++ M
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELS-EAEQAKVLVEINHREGNMDVVLDVLAEM 736
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 202/457 (44%), Gaps = 69/457 (15%)
Query: 83 VVSWNAMLSG---------YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA 133
V+S+NA+L +A+N + +E+ N ++N L+ + G I+ A
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVF----KEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 134 CRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISG 185
LFD ++++N L+ G+ K + + KL M ++ +++S+N +I+G
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 186 YAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KN 237
++G M + + + + D T+ ++ GY + G +A +M + +
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 238 EISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFD 293
I+Y +++ ++ M+ A E + M R N ++ T++ G+ Q G + +A ++
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 294 MMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
M V++ A+I+G+ TG E+A+ + ++K G S + ++S LS
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 409
++ ++ ++V+ G + D ++++++I
Sbjct: 465 DVDEALRVKREMVEKGIK-------------------------------PDTITYSSLIQ 493
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 469
G+ K+A ++E M +G+ PDE T +++A G +++ + M + V
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM-VEKGVL 552
Query: 470 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 506
P Y+ +I+ L + R EA+ L+ + +E S
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 131/299 (43%), Gaps = 52/299 (17%)
Query: 239 ISYNAMVAGYVQSNK-----MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFD 293
+SYNA++ ++S + ++ +E+ E+ S NV ++N +I G+ G+I A LFD
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 294 MMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
M + C V++ +I GY + + DG L RS
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKID-----------DGFKLLRS------------M 266
Query: 350 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWN 405
AL+ G E N ++ + G + E + V + + D V++N
Sbjct: 267 ALK------------GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 406 TMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKD 465
T+I GY + G QAL++ M G+ P IT ++ + AG ++R E+ M +
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-RV 373
Query: 466 YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASRIHGNTE 521
+ P+ + YT ++D + G + EA ++R M F P ++ AL+ + G E
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 136/314 (43%), Gaps = 52/314 (16%)
Query: 3 NGHC-----DSALRVFNTMPRR----SSVSYNAMISGYLR----NARFSLARDLFDKMPQ 49
NGHC + A+ V M + VSY+ ++SG+ R + + R++ +K +
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 50 RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREV 105
D ++++ ++ G+ RR +A L++ M + D ++ A+++ Y G ++A ++
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 106 FYQMPHK----NAISWNGLLAAYVHNGRIEEACRLF-------------------DSKSD 142
+M K + ++++ L+ R EA RL ++ S+
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 143 WELISWNCLMGGFVKRKMLGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNL 198
E S L+ GF + M+ A ++F+ M H D ++N MI G+ + GD+ +A L
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 199 FDQSPHQDVF----TWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSN-- 252
+ + T A+V + G ++E + + + E+S V+ N
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHR 722
Query: 253 --KMDMARELFEAM 264
MD+ ++ M
Sbjct: 723 EGNMDVVLDVLAEM 736
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/579 (22%), Positives = 251/579 (43%), Gaps = 68/579 (11%)
Query: 7 DSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGY 62
D +L + M + S+ SYN+++ + + D++ ++ ++ +++ ++ G
Sbjct: 141 DDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKEIKDKNEHTYSTVVDGL 197
Query: 63 VRNRRLGDARRLFDSMPQKD----VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI--- 115
R ++L DA + KD VVS+N+++SGY + G+ D A+ F + +
Sbjct: 198 CRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 257
Query: 116 -SWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAA----RK 166
S N L+ G I EA L + + + +++N L GF M+ A R
Sbjct: 258 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 317
Query: 167 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNG 221
+ DK DV+++ ++ G Q G++ L + + + M+SG + G
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 222 MLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWN 273
+DEA + F+QM + ++Y+ ++ G + K DMA L++ M + N +
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 274 TMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
++ G Q G + +AR L D + D V + +I GYA++G EEAL +F +
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 330 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 389
G + + +TF+ + + ++I + G L+ Y CG+
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 390 NDV-----FEGIEEKDVVSWNTMIAGYAR---HGFGKQAL--MVFES-------MKTIGV 432
+++ EGI + V+++ + G R H L +FE M++ G+
Sbjct: 558 DELRREMKAEGIPPTN-VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGI 616
Query: 433 KPDEI---TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE 489
PD+I T++ L H G F + K ++ SS Y +ID L G +
Sbjct: 617 PPDQITYNTIIQYLCRVKHLS----GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 490 EAQDLMRNMPFEPPAAS---WGALLGASRIHGNTELGEK 525
+A + ++ + + S + L+ A + G+ E+ K
Sbjct: 673 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 164/388 (42%), Gaps = 75/388 (19%)
Query: 2 RNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV---- 53
+ G D AL +FN M V+Y+ +I G + +F +A L+D+M + ++
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 54 SWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQM 109
+ +L G + L +AR L DS+ D+V +N ++ GYA++G +EA E+F
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF--- 491
Query: 110 PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 169
+ G+ + + ++N L+ G+ K + + ARK+ D
Sbjct: 492 ---KVVIETGITPS---------------------VATFNSLIYGYCKTQNIAEARKILD 527
Query: 170 KMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQ-- 219
+ + VVS+ T++ YA G+ L + + + T++ + G +
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 220 -----NGMLDEARTFFDQMPQ-----------KNEISYNAMVAGYVQSNKMDMARELFEA 263
N +L E F++ Q ++I+YN ++ + + A E
Sbjct: 588 KHENCNHVLRE--RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 264 MPSRNV----SSWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGH 315
M SRN+ +++N +I G I +A + +++ ++ +I + G
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 316 YEEALNMFIEIKRDGESLNRSTFSCALS 343
E A+ +F ++ G +++ +S ++
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/579 (22%), Positives = 251/579 (43%), Gaps = 68/579 (11%)
Query: 7 DSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGY 62
D +L + M + S+ SYN+++ + + D++ ++ ++ +++ ++ G
Sbjct: 141 DDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKEIKDKNEHTYSTVVDGL 197
Query: 63 VRNRRLGDARRLFDSMPQKD----VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI--- 115
R ++L DA + KD VVS+N+++SGY + G+ D A+ F + +
Sbjct: 198 CRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 257
Query: 116 -SWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAA----RK 166
S N L+ G I EA L + + + +++N L GF M+ A R
Sbjct: 258 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 317
Query: 167 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNG 221
+ DK DV+++ ++ G Q G++ L + + + M+SG + G
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 222 MLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWN 273
+DEA + F+QM + ++Y+ ++ G + K DMA L++ M + N +
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 274 TMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
++ G Q G + +AR L D + D V + +I GYA++G EEAL +F +
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 330 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 389
G + + +TF+ + + ++I + G L+ Y CG+
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 390 NDV-----FEGIEEKDVVSWNTMIAGYAR---HGFGKQAL--MVFES-------MKTIGV 432
+++ EGI + V+++ + G R H L +FE M++ G+
Sbjct: 558 DELRREMKAEGIPPTN-VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGI 616
Query: 433 KPDEI---TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE 489
PD+I T++ L H G F + K ++ SS Y +ID L G +
Sbjct: 617 PPDQITYNTIIQYLCRVKHLS----GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 490 EAQDLMRNMPFEPPAAS---WGALLGASRIHGNTELGEK 525
+A + ++ + + S + L+ A + G+ E+ K
Sbjct: 673 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 164/388 (42%), Gaps = 75/388 (19%)
Query: 2 RNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV---- 53
+ G D AL +FN M V+Y+ +I G + +F +A L+D+M + ++
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 54 SWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQM 109
+ +L G + L +AR L DS+ D+V +N ++ GYA++G +EA E+F
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF--- 491
Query: 110 PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 169
+ G+ + + ++N L+ G+ K + + ARK+ D
Sbjct: 492 ---KVVIETGITPS---------------------VATFNSLIYGYCKTQNIAEARKILD 527
Query: 170 KMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQ-- 219
+ + VVS+ T++ YA G+ L + + + T++ + G +
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 220 -----NGMLDEARTFFDQMPQ-----------KNEISYNAMVAGYVQSNKMDMARELFEA 263
N +L E F++ Q ++I+YN ++ + + A E
Sbjct: 588 KHENCNHVLRE--RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 264 MPSRNV----SSWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGH 315
M SRN+ +++N +I G I +A + +++ ++ +I + G
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 316 YEEALNMFIEIKRDGESLNRSTFSCALS 343
E A+ +F ++ G +++ +S ++
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/561 (22%), Positives = 247/561 (44%), Gaps = 57/561 (10%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDS 77
VS + ++ Y++ + A + M +R ++ + N++L G RN G A L
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 78 MPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGR 129
M + DV S+N ++ G+ + ++A E+ +M ++W L+ A+ G+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 130 IEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD----VVSWNT 181
++EA + +L+ + L+ GF L + LFD++ R +++NT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 182 MISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN 237
+I G+ + G + +A +F+ + +V+T+T ++ G G EA + M +K+
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 238 E----ISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIAQAR 289
E ++YN ++ + + A E+ E M R ++N ++ G GD+ +A
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 290 KLFDMMPQR------DCVSWAAIISGYAQTGHYEEALNMF---IEIKRDGESLNRSTFSC 340
KL +M + D +S+ A+I G + +AL+++ +E G+ + +
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 341 ALSTCADI-AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-- 397
+ D+ A+EL KQI + +T A++ + K G + A + +
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTY----TAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 398 --EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 455
+ V +N +++ + G QA +FE M+ PD ++ ++ AG I
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 456 TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ---DLMRNMPFEPPAASWGALLG 512
M++ ++P Y+ +I+ + G L+EA D M + FEP A ++L
Sbjct: 584 ESLLVGMSR-AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Query: 513 ASRIHGNTELGEKAAEMVFKM 533
G T +K E+V K+
Sbjct: 643 YCISQGET---DKLTELVKKL 660
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 201/421 (47%), Gaps = 42/421 (9%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQRD----LVSWNVMLTGYVRNRRLGDARRLFDS 77
V Y ++I G+ + LFD++ +R +++N ++ G+ + +L +A +F+
Sbjct: 248 VVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEF 307
Query: 78 MPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGR 129
M ++ +V ++ ++ G G EA ++ M K NA+++N ++ +G
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 130 IEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR------DVVSW 179
+ +A + + ++ + I++N L+GG + L A KL M DV+S+
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 180 NTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 235
N +I G ++ + QA +++D + D T +++ ++ G +++A + Q+
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 236 ----KNEISYNAMVAGYVQSNKMDMARELF------EAMPSRNVSSWNTMITGYGQNGDI 285
+N +Y AM+ G+ ++ +++A+ L E PS V +N +++ + G +
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS--VFDYNCLLSSLCKEGSL 545
Query: 286 AQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCA 341
QA +LF+ M + D VS+ +I G + G + A ++ + + R G S + T+S
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 401
++ + L+ ++V +G+E + +++L G + ++ + + +KD+
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Query: 402 V 402
V
Sbjct: 666 V 666
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 143/644 (22%), Positives = 276/644 (42%), Gaps = 85/644 (13%)
Query: 21 SVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYV------RNRRLGD 70
+ ++N +I ++ AR+LFD+MP++ + ++ +++ GY + L +
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 71 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVH 126
A F +P K V +N ++S + + G D++ ++ +M + + +++N ++A
Sbjct: 207 AMESFGVLPNK--VIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 127 NGRIEEACRLFDSKSDWEL-----------ISWNCLMGGFVKRKMLGAARKLFDKMHVRD 175
G++ +A R+F SD EL I++N ++ GF K +L A+ LF+ + D
Sbjct: 265 EGKVLDASRIF---SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 176 ----VVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 227
+ S+N + G + G +A K + D+ ++++ ++ G + GML +A+
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 228 TFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGY 279
T M + + ++Y ++ GY K+D A+ L + M N + N ++
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 280 GQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 335
+ G I++A +L M ++ D V+ I+ G +G ++A+ + ++ G
Sbjct: 442 WKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG----- 496
Query: 336 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG----NALLGMYFKCGSIGEAND 391
S AL LG G V + E C + LL K G EA +
Sbjct: 497 ---SAALGN--------LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 392 VF-EGIEEK---DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 447
+F E + EK D V++N I + + G A V + M+ G T ++
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG-- 603
Query: 448 HAGLIDRGTEYFYSMN--KDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM---PFEP 502
G+ ++ E M+ K+ ++P+ Y I L ++E+A +L+ M P
Sbjct: 604 -LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662
Query: 503 PAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRS 562
S+ L+ A + ++ ++ E + G+Y L+ N A+G+ A +
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLE 722
Query: 563 RMRDVGVQKVTGY--SWVEVQNKIHKFTVGD-CFHPEKDRIYAF 603
+ D G + T VE K + V H DR Y F
Sbjct: 723 AVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/509 (20%), Positives = 218/509 (42%), Gaps = 72/509 (14%)
Query: 36 RFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM------PQKDVVSWNAM 89
+F L R F + + + +N++L ++ RR+ L+ M PQ ++N +
Sbjct: 97 QFQLVRSRFPE-NKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQ--TYTFNLL 153
Query: 90 LSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL 145
+ + D ARE+F +MP K N ++ L+ Y G ++ L ++ + +
Sbjct: 154 IRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGV 213
Query: 146 IS----WNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKN 197
+ +N ++ F + + K+ +KM V D+V++N+ IS ++G + A
Sbjct: 214 LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273
Query: 198 LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMA 257
+F LDE + +P+ N I+YN M+ G+ + ++ A
Sbjct: 274 IFSDME-------------------LDE----YLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 258 RELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISG 309
+ LFE++ + + S+N + G ++G +A + M + S+ ++ G
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 310 YAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETG 369
+ G +A + +KR+G + T+ C L + ++ K + ++++
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 370 CFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFE 425
+ N LL +K G I EA ++ + EK D V+ N ++ G G +A+ + +
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 426 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 485
M+ G +G L S+ GL+D + + P Y+ +++ L +A
Sbjct: 491 GMRVHGS-----AALGNLGN-SYIGLVDDSL-------IENNCLPDLITYSTLLNGLCKA 537
Query: 486 GRLEEAQDLMRNM---PFEPPAASWGALL 511
GR EA++L M +P + ++ +
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 115/570 (20%), Positives = 232/570 (40%), Gaps = 112/570 (19%)
Query: 2 RNGHCDSALRVFNTM--------PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD-- 51
+ G A R+F+ M PR +S++YN M+ G+ + A+ LF+ + + D
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 52 --LVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREV 105
L S+N+ L G VR+ + +A + M K + S+N ++ G + G +A+ +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 106 FYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV----- 156
M +A+++ LL Y G+++ A L E++ NCL +
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ-----EMMRNNCLPNAYTCNILL 438
Query: 157 ----KRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQA------------- 195
K + A +L KM+ + D V+ N ++ G G++ +A
Sbjct: 439 HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498
Query: 196 --------------KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKN 237
+L + + D+ T++ +++G + G EA+ F +M Q +
Sbjct: 499 ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD 558
Query: 238 EISYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFD 293
++YN + + + K+ A + + M +++ ++N++I G G I + L D
Sbjct: 559 SVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMD 618
Query: 294 MMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 349
M ++ + ++ I + E+A N+ E+ + + N +F + +
Sbjct: 619 EMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVP 678
Query: 350 ALELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 408
++ +++ V G + G + + + G + +A ++ E + ++
Sbjct: 679 DFDMAQEVFETAVSICGQKEGLY--SLMFNELLAAGQLLKATELLEAVLDR--------- 727
Query: 409 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 468
G+ F + L+ ES+ K DE+ V S H +IDRG Y
Sbjct: 728 -GFELGTFLYKDLV--ESL----CKKDELE---VASGILHK-MIDRG----------YGF 766
Query: 469 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
P++ +ID LG+ G +EA M
Sbjct: 767 DPAA--LMPVIDGLGKMGNKKEANSFADKM 794
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 218/486 (44%), Gaps = 83/486 (17%)
Query: 1 MRNGHCDSALRVFNTMPRRSSVSYNAMIS-----GYLRNARFSLARDLFDKMP----QRD 51
+RNG +F+ + +V N++I+ Y N+RF L + F + +
Sbjct: 128 VRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLS 187
Query: 52 LVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFY 107
+S ++ ++ R D ++ M Q +V ++N +++ + G ++AR+V
Sbjct: 188 ALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 108 QMP----HKNAISWNGLLAAYVH---NGRIEEA----CRLFDSKSDWELISWNCLMGGFV 156
M N +S+N L+ Y NG++ +A + ++ L ++N L+ GF
Sbjct: 248 DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFW 307
Query: 157 KRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVF 208
K L + K+F +M +DV +S+N++I+G G +S+A ++ D+ ++
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Query: 209 TWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS----YNAMVAGYVQSNKMDMARELFEAM 264
T+ A+++G+ +N ML EA F + + + YN ++ Y + K+D L E M
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 265 PSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR---DCVSWAAIISGYAQTGHYE 317
+V ++N +I G +NG+I A+KLFD + + D V++ ++ GY + G
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESR 487
Query: 318 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 377
+A + E+ + G T+ N ++
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTY-----------------------------------NIVM 512
Query: 378 GMYFKCGSIGEANDVFEGIEEK-----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 432
Y K G++ A ++ +E++ +V S+N ++ GY++ G + A M+ M G+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Query: 433 KPDEIT 438
P+ IT
Sbjct: 573 VPNRIT 578
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 208/448 (46%), Gaps = 39/448 (8%)
Query: 88 AMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA-----AYVHNGRIEEACRLFDSKS- 141
+ L G+ +NG + +F+ + + + N ++A AY +N R E F
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGY 181
Query: 142 -DWELISWNC--LMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQ 194
++L + +C LM +K ++ +M R +V ++N +I+ + G M++
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 195 AKNLFDQ------SPHQDVFTWTAMVSGYVQ---NGMLDEARTFFDQMPQK----NEISY 241
A+++ + SP +V ++ ++ GY + NG + +A +M + N ++
Sbjct: 242 ARDVMEDMKVYGCSP--NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTF 299
Query: 242 NAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMP- 296
N ++ G+ + + + + ++F+ M + NV S+N++I G G I++A + D M
Sbjct: 300 NILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS 359
Query: 297 ---QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALEL 353
Q + +++ A+I+G+ + +EAL+MF +K G ++ + + ++
Sbjct: 360 AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDD 419
Query: 354 GKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK---DVVSWNTMIAG 410
G + ++ + G N L+ + G+I A +F+ + K D+V+++ ++ G
Sbjct: 420 GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEG 479
Query: 411 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 470
Y R G ++A M+ + M +G+KP +T V+ G + T M K+ +
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM 539
Query: 471 SSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
+ Y ++ + G+LE+A L+ M
Sbjct: 540 NVASYNVLLQGYSQKGKLEDANMLLNEM 567
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 175/370 (47%), Gaps = 43/370 (11%)
Query: 12 VFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYV 63
V+ M RR + ++N +I+ + + + ARD+ + M ++VS+N ++ GY
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 64 R---NRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREVFYQMPHK---- 112
+ N ++ A + M + DV ++N ++ G+ ++ + +VF +M +
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 113 NAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKLF 168
N IS+N L+ + G+I EA + D + LI++N L+ GF K ML A +F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 169 DKMHVRDVVS----WNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQN 220
+ + V +N +I Y + G + L ++ + DV T+ +++G +N
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 221 GMLDEARTFFDQMPQK---NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWN 273
G ++ A+ FDQ+ K + ++++ ++ GY + + A L + M + ++N
Sbjct: 450 GNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 274 TMITGYGQNGDIAQARKLFDMMPQR-----DCVSWAAIISGYAQTGHYEEALNMFIEIKR 328
++ GY + G++ A + M + + S+ ++ GY+Q G E+A + E+
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 329 DGESLNRSTF 338
G NR T+
Sbjct: 570 KGLVPNRITY 579
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 112/555 (20%), Positives = 232/555 (41%), Gaps = 69/555 (12%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDS 77
V+YN ++ Y + RF A +L D M + D+ ++N+++ R+ R+ L
Sbjct: 269 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328
Query: 78 MPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF 137
M ++ M H N +++N L+ + + G++ A +L
Sbjct: 329 MRKR---------------------------MIHPNEVTYNTLINGFSNEGKVLIASQLL 361
Query: 138 DSKSDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQD 189
+ + L +++N L+ G + A K+F M + + VS+ ++ G ++
Sbjct: 362 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 421
Query: 190 GDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISY 241
+ A+ + + V T+T M+ G +NG LDEA ++M + + ++Y
Sbjct: 422 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 481
Query: 242 NAMVAGYVQSNKMDMARE----LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP- 296
+A++ G+ + + A+E ++ S N ++T+I + G + +A ++++ M
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541
Query: 297 ---QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALEL 353
RD ++ +++ + G EA + DG N +F C ++ +
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601
Query: 354 GKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE----EKDVVSWNTMIA 409
+ ++ K G+ F +LL K G + EA + + D V +NT++
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 410 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 469
+ G +A+ +F M + PD T ++S G + +V
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 470 PSSKHYTCMIDLLGRAGRLEEA---QDLMRNMPFEPPAASWGALLGASRIHGNTELG--E 524
P+ YTC +D + +AG+ + ++ M N+ P + A+ I G + +G E
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM-----IDGYSRMGKIE 776
Query: 525 KAAEMVFKMEPHNSG 539
K +++ +M N G
Sbjct: 777 KTNDLLPEMGNQNGG 791
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 229/493 (46%), Gaps = 68/493 (13%)
Query: 4 GHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMPQRDL----VSW 55
G+ AL++F M + S VSY ++ G +NA F LAR + +M + + +++
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446
Query: 56 NVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMPH 111
M+ G +N L +A L + M + D+V+++A+++G+ + G A+E+ ++ +
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI-Y 505
Query: 112 KNAISWNGLL-AAYVHN----GRIEEACRLFDSK----SDWELISWNCLMGGFVKRKMLG 162
+ +S NG++ + ++N G ++EA R++++ + ++N L+ K +
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 163 AARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFDQSP----HQDVFTWTAMV 214
A + M + + VS++ +I+GY G+ +A ++FD+ H FT+ +++
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 215 SGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWN 273
G + G L EA F + A+P+ + +N
Sbjct: 626 KGLCKGGHLREAEKFLKSL----------------------------HAVPAAVDTVMYN 657
Query: 274 TMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRD 329
T++T ++G++A+A LF M QR D ++ ++ISG + G A+ E +
Sbjct: 658 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 717
Query: 330 GESL-NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 388
G L N+ ++C + + G Q+ G+ NA++ Y + G I +
Sbjct: 718 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 777
Query: 389 ANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 444
ND+ + + ++ ++N ++ GY++ + +++ S+ G+ PD++T ++
Sbjct: 778 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 837
Query: 445 ACSHAGLIDRGTE 457
+ +++ G +
Sbjct: 838 GICESNMLEIGLK 850
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/573 (21%), Positives = 250/573 (43%), Gaps = 61/573 (10%)
Query: 2 RNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL----V 53
+NG D A+ + N M + V+Y+A+I+G+ + RF A+++ ++ + L +
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Query: 54 SWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQM 109
++ ++ R L +A R++++M +D ++N +++ + G EA E M
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574
Query: 110 PH----KNAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELISWNCLMGGFVKRKML 161
N +S++ L+ Y ++G +A +FD + ++ L+ G K L
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 162 GAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAM 213
A K +H D V +NT+++ + G++++A +LF +S D +T+T++
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694
Query: 214 VSGYVQNGMLDEARTFFDQMPQK-----NEISYNAMVAGYVQSNKMDMARELFEAMP--- 265
+SG + G A F + + N++ Y V G ++ + E M
Sbjct: 695 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Query: 266 -SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRD----CVSWAAIISGYAQTGHYEEAL 320
+ ++ + N MI GY + G I + L M ++ ++ ++ GY++ +
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 321 NMFIEIKRDGESLNRST-FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 379
++ I +G ++ T S L C LE+G +I + G E + N L+
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGICES-NMLEIGLKILKAFICRGVEVDRYTFNMLIS- 872
Query: 380 YFKCGSIGEANDVFEGIE---------EKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 430
KC + GE N F+ ++ +KD + + M++ R+ +++ MV M
Sbjct: 873 --KCCANGEINWAFDLVKVMTSLGISLDKD--TCDAMVSVLNRNHRFQESRMVLHEMSKQ 928
Query: 431 GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEE 490
G+ P+ +G+++ G I M + + P + + M+ L + G+ +E
Sbjct: 929 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA-HKICPPNVAESAMVRALAKCGKADE 987
Query: 491 AQDLMR---NMPFEPPAASWGALLGASRIHGNT 520
A L+R M P AS+ L+ +GN
Sbjct: 988 ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 1020
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/636 (18%), Positives = 258/636 (40%), Gaps = 93/636 (14%)
Query: 10 LRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLG 69
L+ + M +SS + A+++ Y ++ + +++++ Y+R +
Sbjct: 135 LKELSLMSGKSSFVFGALMTTY--------------RLCNSNPSVYDILIRVYLREGMIQ 180
Query: 70 DARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEA----REVFYQMPHKNAISWNGLL 121
D+ +F M V + NA+L ++G +E+ + + ++N L+
Sbjct: 181 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILI 240
Query: 122 AAYVHNGRIEEACRLFDS--KSDW--ELISWNCLMGGFVKRKMLGAARKLFDKMHVR--- 174
G E++ L KS + ++++N ++ + K+ AA +L D M +
Sbjct: 241 NVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD 300
Query: 175 -DVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF 229
DV ++N +I + +++ +++ + H + T+ +++G+ G + A
Sbjct: 301 ADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQL 360
Query: 230 FDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQ 281
++M N +++NA++ G++ A ++F M ++ ++ S+ ++ G +
Sbjct: 361 LNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 420
Query: 282 NGDIAQARKLFDMMPQRD-CV---SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 337
N + AR + M + CV ++ +I G + G +EA+ + E+ +DG + T
Sbjct: 421 NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 480
Query: 338 FSCALSTCADIAALELGKQIHGQVVKTG-------YET--------GC------------ 370
+S ++ + + K+I ++ + G Y T GC
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 371 --------FVGNALLGMYFKCGSIGEANDVFEGIEEKDV----VSWNTMIAGYARHGFGK 418
F N L+ K G + EA + + + VS++ +I GY G G
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600
Query: 419 QALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCM 478
+A VF+ M +G P T +L G + ++ S++ + Y +
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA-VPAAVDTVMYNTL 659
Query: 479 IDLLGRAGRLEEAQDLMRNM---PFEPPAASWGALLGASRIHGNTELG---EKAAEMVFK 532
+ + ++G L +A L M P + ++ +L+ G T + K AE
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 719
Query: 533 MEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVG 568
+ P N MY + +G+W R +M ++G
Sbjct: 720 VLP-NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/516 (18%), Positives = 210/516 (40%), Gaps = 83/516 (16%)
Query: 20 SSVSYNAMISGYLRNARFSLARDLFDKMPQ----RDLVSWNVMLTGYVRNRRLGDARRLF 75
++VS++ +I+GY + A +FD+M + ++ +L G + L +A +
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 76 DSM----PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI----SWNGLLAAYVHN 127
S+ D V +N +L+ ++G +A +F +M ++ + ++ L++
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 128 GRIEEACRLFDSKSDWE------LISWNCLMGGFVKRKMLGAARKLFDKM----HVRDVV 177
G+ A LF +++ + + C + G K A ++M H D+V
Sbjct: 702 GKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 760
Query: 178 SWNTMISGYAQDGDMSQAKNLFDQSPHQD----VFTWTAMVSGYVQNGMLDEA----RTF 229
+ N MI GY++ G + + +L + +Q+ + T+ ++ GY + + + R+
Sbjct: 761 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 820
Query: 230 FDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDI 285
++++ +++V G +SN +++ ++ +A R V ++N +I+ NG+I
Sbjct: 821 ILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI 880
Query: 286 AQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCA 341
A L +M D + A++S + ++E+ + E+ + G S +
Sbjct: 881 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 940
Query: 342 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN----------- 390
++ + ++ + +++ +A++ KCG EA
Sbjct: 941 INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 1000
Query: 391 ------------------DVFEGIEEK----------DVVSWNTMIAGYARHGFGKQALM 422
+V E +E + D+VS+N +I G G A
Sbjct: 1001 VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFE 1060
Query: 423 VFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEY 458
++E MK G + T ++ GL+ R T +
Sbjct: 1061 LYEEMKGDGFLANATTYKALIR-----GLLARETAF 1091
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/542 (21%), Positives = 230/542 (42%), Gaps = 68/542 (12%)
Query: 7 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ----RDLVSWNVM 58
D A+ +F M P S V ++ ++S + +F L L ++M +L ++++
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 59 LTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN 118
+ + R +L A + M M GY + ++ N
Sbjct: 117 INYFCRRSQLSLALAILGKM----------MKLGYGPS-----------------IVTLN 149
Query: 119 GLLAAYVHNGRIEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMHVR 174
LL + H RI EA L D + + +++ L+ G + A L ++M V+
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 175 ----DVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEA 226
D+V++ +I+G + G+ A NL ++ DV + ++ G + +D+A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 227 RTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS----WNTMITG 278
F++M K + +YN +++ + A L M +N++ +N +I
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 279 YGQNGDIAQARKLFDMMPQR-----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 333
+ + G + +A KL+D M + D V++ +I G+ + EE + +F E+ + G
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 334 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 393
N T++ + + + + Q+V G N LL G++ A VF
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 394 EGIEEKD----VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 449
E ++++D +V++ TMI + G + +F S+ GVKP+ +T ++S
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509
Query: 450 GLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL---MRNMPFEPPAAS 506
GL + F M +D + P+S Y +I R G + +L MR+ F A++
Sbjct: 510 GLKEEADALFVEMKEDGPL-PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568
Query: 507 WG 508
+G
Sbjct: 569 FG 570
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 125/297 (42%), Gaps = 17/297 (5%)
Query: 218 VQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMP----SRNV 269
+Q+ LD+A F M P + + ++ +++ + NK D+ L E M S N+
Sbjct: 51 LQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 110
Query: 270 SSWNTMITGYGQNGDIAQARKLFDMMPQ----RDCVSWAAIISGYAQTGHYEEALNMFIE 325
+++ I + + ++ A + M + V+ ++++G+ EA+ + +
Sbjct: 111 YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 170
Query: 326 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG- 384
+ G + TF+ + + ++V G + A++ K G
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 385 ---SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVG 441
++ N + +G E DVV +NT+I G ++ A +F M+T G+KPD T
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 442 VLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
++S + G + M + ++ P + +ID + G+L EA+ L M
Sbjct: 291 LISCLCNYGRWSDASRLLSDM-LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 218/492 (44%), Gaps = 78/492 (15%)
Query: 2 RNGHCDSALRVFNTMPRR----SSVSYNAMISGY--LRNARFSL-ARDLFDKMPQRDLVS 54
R+G+ +L + TM R+ + +I G+ LRN ++ ++ +K Q D+ +
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFA 160
Query: 55 WNVMLTGYVRNRRLGDARRLFDSMPQKD----VVSWNAMLSGYAQNGYADEAREVFYQMP 110
+N ++ G+ + R+ DA R+ D M KD V++N M+ G D A +V Q+
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 111 HKN----AISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLG 162
N I++ L+ A + G ++EA +L D ++ ++N ++ G K M+
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 163 AARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNL----FDQSPHQDVFTWTAMV 214
A ++ + ++ DV+S+N ++ G + + L F + +V T++ ++
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 215 SGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPS---- 266
+ ++G ++EA M +K + SY+ ++A + + ++D+A E E M S
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 267 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNM 322
++ ++NT++ +NG QA ++F + + C S+ + S +G AL+M
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 323 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 382
+E+ +G + T+ N+++ +
Sbjct: 461 ILEMMSNGIDPDEITY-----------------------------------NSMISCLCR 485
Query: 383 CGSIGEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 438
G + EA ++ + VV++N ++ G+ + + A+ V ESM G +P+E T
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETT 545
Query: 439 MVGVLSACSHAG 450
++ AG
Sbjct: 546 YTVLIEGIGFAG 557
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 180/415 (43%), Gaps = 28/415 (6%)
Query: 111 HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW---ELISWNCLMGGFVKRKMLGAARKL 167
+ + I L+ + I +A R+ + + ++ ++N L+ GF K + A ++
Sbjct: 121 NPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRV 180
Query: 168 FDKMHVRD----VVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQ 219
D+M +D V++N MI G + A + +Q + V T+T ++ +
Sbjct: 181 LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATML 240
Query: 220 NGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSS 271
G +DEA D+M + + +YN ++ G + +D A E+ + + +V S
Sbjct: 241 EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVIS 300
Query: 272 WNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEIK 327
+N ++ G + KL M C V+++ +I+ + G EEA+N+ +K
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 328 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 387
G + + ++ ++ L++ + ++ G N +L K G
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420
Query: 388 EANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 443
+A ++F + E + S+NTM + G +AL + M + G+ PDEIT ++
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Query: 444 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 498
S G++D E M + PS Y ++ +A R+E+A +++ +M
Sbjct: 481 SCLCREGMVDEAFELLVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 15/277 (5%)
Query: 311 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIH-GQVVKTGYETG 369
++G+Y E+L++ + R G N C + K + ++++ +
Sbjct: 100 CRSGNYIESLHLLETMVRKG--YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPD 157
Query: 370 CFVGNALLGMYFKCGSIGEANDVFEGIEEKD----VVSWNTMIAGYARHGFGKQALMVFE 425
F NAL+ + K I +A V + + KD V++N MI G AL V
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 426 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 485
+ + +P IT ++ A G +D + M + P Y +I + +
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYNTIIRGMCKE 276
Query: 486 GRLEEAQDLMRNMPF---EPPAASWGALLGASRIHGNTELGEKAAEMVF--KMEPHNSGM 540
G ++ A +++RN+ EP S+ LL A G E GEK +F K +P N
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP-NVVT 335
Query: 541 YVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSW 577
Y +L G+ +A N+ M++ G+ YS+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTP-DAYSY 371
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/609 (21%), Positives = 255/609 (41%), Gaps = 84/609 (13%)
Query: 21 SVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFD 76
SV+YN M+ Y + A L +M + D++ N ++ + R+ +A ++F
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 77 SMPQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNG 128
M + VV++N +L+G +NG EA E+F M K N I++N L N
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 129 RIEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMH---VRDVVSWNT 181
+ A ++ D ++ ++N ++ G VK + A F +M D V+ T
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCT 682
Query: 182 MISGYAQDGDMSQAKN-----LFDQSPHQDVFTWTAMVSG----------------YVQN 220
++ G + + A L++ + W ++ V N
Sbjct: 683 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN 742
Query: 221 GMLDE--------------------ARTFFDQMP-----QKNEISYNAMVAGYVQSNKMD 255
G+ + ART F++ Q +YN ++ G ++++ ++
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802
Query: 256 MARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAII 307
+A+++F + S +V+++N ++ YG++G I + +L+ M +C ++ +I
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862
Query: 308 SGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 366
SG + G+ ++AL+++ ++ D + S T+ + + L KQ+ ++ G
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922
Query: 367 ETGCFVGNALLGMYFKCGSIGEANDVF-----EGIEEKDVVSWNTMIAGYARHGFGKQAL 421
C + N L+ + K G A +F EG+ D+ +++ ++ G + L
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP-DLKTYSVLVDCLCMVGRVDEGL 981
Query: 422 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL 481
F+ +K G+ PD + +++ + ++ F M +TP Y +I
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 482 LGRAGRLEEAQDL---MRNMPFEPPAASWGALLGASRIHGNTELGEKAAE-MVFKMEPHN 537
LG AG +EEA + ++ EP ++ AL+ + G E + MV N
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Query: 538 SGMYVLLSN 546
+G Y L N
Sbjct: 1102 TGTYEQLPN 1110
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 131/561 (23%), Positives = 238/561 (42%), Gaps = 91/561 (16%)
Query: 22 VSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDS 77
V++ ++ + F A D D M + +L ++N ++ G +R RL DA LF +
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 78 MPQKDV----VSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGR 129
M V ++ + Y ++G + A E F +M K N ++ N L + GR
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 130 IEEACRLFDSKSDWELI----SWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNT 181
EA ++F D L+ ++N +M + K + A KL +M DV+ N+
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 182 MISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK- 236
+I+ + + +A +F + V T+ +++G +NG + EA F+ M QK
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 237 ---NEISYNAMVAGYVQSNKMDMA-RELFEAMP---SRNVSSWNTMITGYGQNGDIAQAR 289
N I++N + +++++ +A + LF+ M +V ++NT+I G +NG + +A
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 290 KLFDMMPQ---RDCVSWAAIISGYAQTGHYEEAL---------------NMFIE------ 325
F M + D V+ ++ G + E+A N+F E
Sbjct: 664 CFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSI 723
Query: 326 --------------------IKRDGESLNRST--FSCALSTCADIAAL--ELGKQIHGQV 361
I RDG+S+ +SC + + L + K + Q
Sbjct: 724 LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP 783
Query: 362 VKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFG 417
Y N L+G + I A DVF ++ DV ++N ++ Y + G
Sbjct: 784 KLPTY-------NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 418 KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC 477
+ +++ M T + + IT V+S AG +D + +Y + D +P++ Y
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 478 MIDLLGRAGRLEEAQDLMRNM 498
+ID L ++GRL EA+ L M
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGM 917
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 214/481 (44%), Gaps = 37/481 (7%)
Query: 54 SWNVMLTGYVRNRRLGDA----RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM 109
S+N ++ +++R +A RR+ + + ++++++ G + D + +M
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 110 P----HKNAISWNGLLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKML 161
N ++ + G+I EA R+ D +++++ L+ + L
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 162 GAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAM 213
A+++F+KM H D V++ T++ ++ + D+ K + + DV T+T +
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 214 VSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 269
V + G EA D M + N +YN ++ G ++ +++D A ELF M S V
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 270 S----SWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALN 321
++ I YG++GD A + F+ M + + V+ A + A+ G EA
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 322 MFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYF 381
+F +K G + T++ + + + ++ ++ ++++ G E V N+L+ +
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 382 KCGSIGEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 437
K + EA +F ++E VV++NT++AG ++G ++A+ +FE M G P+ I
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 609
Query: 438 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 497
T + + + + M D P Y +I L + G+++EA
Sbjct: 610 TFNTLFDCLCKNDEVTLALKMLFKM-MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Query: 498 M 498
M
Sbjct: 669 M 669
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 140/689 (20%), Positives = 273/689 (39%), Gaps = 157/689 (22%)
Query: 34 NARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAM 89
N + + + + D+ D+V++ V++ R+L A+ +F+ M + D V++ +
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 90 LSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL 145
L ++ N D ++ + +M + +++ L+ A G EA D D +
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 146 I----SWNCLMGGFVKRKMLGAARKL---------------------------------- 167
+ ++N L+ G ++ L A +L
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 168 -FDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYV 218
F+KM + ++V+ N + A+ G +AK +F D D T+ M+ Y
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 219 QNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMP----SRNVS 270
+ G +DEA +M + + I N+++ +++++D A ++F M V
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 271 SWNTMITGYGQNGDIAQARKLFDMMPQRDC------------------------------ 300
++NT++ G G+NG I +A +LF+ M Q+ C
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 301 ---------VSWAAIISGYAQTGHYEEALNMFIEIKR----------------DGESLNR 335
++ II G + G +EA+ F ++K+ SL
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIE 694
Query: 336 STFSCA---LSTCADIAALELGKQIHGQVV-KTGYETG------------CFVGNALLG- 378
+ L CAD A + + G ++ + G + C G+++L
Sbjct: 695 DAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 754
Query: 379 -MYFKC--GSIGEANDVFE------GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 429
+ + C ++ A +FE G++ K + ++N +I G + A VF +K+
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPK-LPTYNLLIGGLLEADMIEIAQDVFLQVKS 813
Query: 430 IGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE 489
G PD T +L A +G ID E + M+ + ++ + +I L +AG ++
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST-HECEANTITHNIVISGLVKAGNVD 872
Query: 490 EA----QDLMRNMPFEPPAASWGALLG----ASRIHGNTELGEKAAEMVFKMEPHNSGMY 541
+A DLM + F P A ++G L+ + R++ +L E + + P N +Y
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD--YGCRP-NCAIY 929
Query: 542 VLLSNLYAASGRWADAGNMRSRMRDVGVQ 570
+L N + +G A + RM GV+
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVR 958
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 184/422 (43%), Gaps = 27/422 (6%)
Query: 174 RDVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF 229
RD ++ T+ + G + QA + + + + +++ ++ +++ EA
Sbjct: 151 RDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEV 210
Query: 230 FDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQ 281
+ +M + + +Y++++ G + +D L + M + NV ++ I G+
Sbjct: 211 YRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGR 270
Query: 282 NGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 337
G I +A ++ M C V++ +I + A +F ++K +R T
Sbjct: 271 AGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVT 330
Query: 338 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE 397
+ L +D L+ KQ ++ K G+ L+ K G+ GEA D + +
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMR 390
Query: 398 EKDVV----SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 453
++ ++ ++NT+I G R AL +F +M+++GVKP T + + +G
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV 450
Query: 454 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL---MRNMPFEPPAASWGAL 510
E F M K + P+ + L +AGR EA+ + ++++ P + ++ +
Sbjct: 451 SALETFEKM-KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509
Query: 511 LGA-SRIHGNTELGEKAAEMVFK-MEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVG 568
+ S++ E + +EM+ EP + L++ LY A R +A M RM+++
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD-RVDEAWKMFMRMKEMK 568
Query: 569 VQ 570
++
Sbjct: 569 LK 570
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 139/598 (23%), Positives = 255/598 (42%), Gaps = 111/598 (18%)
Query: 1 MRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLR-NARFSL--ARDLFDKMPQ---- 49
+ G AL++F M R + ++ N ++ G +R + FS+ AR++FD M +
Sbjct: 142 LHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVS 201
Query: 50 RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK-----DVVSWNAMLSGYAQNGYADEARE 104
++ ++NV++ GY +L DA + + M + D V++N +L ++ G + +E
Sbjct: 202 LNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKE 261
Query: 105 VFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELISWNCLMGGFV 156
+ M N +++N L+ Y G ++EA ++ + +L ++N L+ G
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLC 321
Query: 157 KRKMLGAARKLFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQ----------- 201
+ +L D M DVV++NT+I G + G +A+ L +Q
Sbjct: 322 NAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQV 381
Query: 202 -------------------------------SPHQDVFTWTAMVSGYVQNGMLDEARTFF 230
SP D+ T+ ++ Y++ G L A
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSP--DIVTYHTLIKAYLKVGDLSGALEMM 439
Query: 231 DQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQN 282
+M QK N I+ N ++ + K+D A L + R + ++ T+I G+ +
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE 499
Query: 283 GDIAQARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 338
+ +A +++D M + ++ ++I G G E A+ F E+ G + STF
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 339 -SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG-I 396
S L C + +E + + + +K ++ + N LL K G +A + F I
Sbjct: 560 NSIILGYCKE-GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Query: 397 EEK--DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG---- 450
EE+ D V++NTMI+ + + K+A + M+ G++PD T +S G
Sbjct: 619 EEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSE 678
Query: 451 ---LIDRGTEYFYSMNKDYSV-------TPSSKH--------YTCMIDLLGRAGRLEE 490
L+ + + F SM +D V T SK Y+ +ID L GRL+E
Sbjct: 679 TDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 118/556 (21%), Positives = 249/556 (44%), Gaps = 51/556 (9%)
Query: 6 CDSALRV-FNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLT 60
C+S L + P S ++ +S YL + +A +F KM + +L++ N +L
Sbjct: 115 CNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLI 174
Query: 61 GYVR---NRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREVFYQM---- 109
G VR + + AR +FD M + +V ++N +++GY G ++A + +M
Sbjct: 175 GLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEF 234
Query: 110 -PHKNAISWNGLLAAYVHNGRIEEACR-LFDSKSDWEL---ISWNCLMGGFVKRKMLGAA 164
+ + +++N +L A GR+ + L D K + + +++N L+ G+ K L A
Sbjct: 235 KVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA 294
Query: 165 RKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSG 216
++ + M + D+ ++N +I+G G M + L D DV T+ ++ G
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354
Query: 217 YVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMD-MARELFEAMP----SR 267
+ G+ EAR +QM + N++++N + + K + + R++ E + S
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP 414
Query: 268 NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMF 323
++ +++T+I Y + GD++ A ++ M Q+ + ++ I+ + +EA N+
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 324 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 383
+ G ++ T+ + +E ++ ++ K N+L+G
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 384 GSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 439
G A + F+ + E D ++N++I GY + G ++A + KPD T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 440 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 499
+L+ G+ ++ +F ++ ++ V + Y MI + +L+EA DL+ M
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEEREVDTVT--YNTMISAFCKDKKLKEAYDLLSEME 652
Query: 500 ---FEPPAASWGALLG 512
EP ++ + +
Sbjct: 653 EKGLEPDRFTYNSFIS 668
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 122/575 (21%), Positives = 242/575 (42%), Gaps = 54/575 (9%)
Query: 110 PHKNAISWNGLLAAYVHNGRIEEACRLFDS----KSDWELISWNCLMGGFVKRKM---LG 162
P + ++ L+AY+H G+ A ++F K L++ N L+ G V+ +
Sbjct: 127 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 186
Query: 163 AARKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQ-----SPHQDVFTWTA 212
+AR++FD M V+ +V ++N +++GY +G + A + ++ + D T+
Sbjct: 187 SAREVFDDM-VKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 213 MVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRN 268
++ + G L + + M + N ++YN +V GY + + A ++ E M N
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 269 V----SSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEAL 320
V ++N +I G G + + +L D M Q D V++ +I G + G EA
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 321 NMFIEIKRDGESLNRSTFSCALS-TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 379
+ +++ DG N+ T + +L C + + +++ V G+ + L+
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 380 YFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 435
Y K G + A ++ + +K + ++ NT++ + +A + S G D
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 436 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE---EAQ 492
E+T ++ +++ E + M K +TP+ + +I L G+ E E
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKK-VKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 493 DLMRNMPFEPPAASWGALL----GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLY 548
D + P +++ +++ R+ E ++ + FK P N +LL+ L
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK--PDNYTCNILLNGL- 601
Query: 549 AASGRWADAGNM-RSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEEL 607
G A N + + + V VT + + K K E + + +EE
Sbjct: 602 CKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLK-------EAYDLLSEMEEK 654
Query: 608 DLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEK 642
L+ R Y S L++ D + E + +LK S K
Sbjct: 655 GLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 170/349 (48%), Gaps = 36/349 (10%)
Query: 18 RRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARR 73
R S V+ ++++G+ + RF A L D M ++V +N ++ G +NR L +A
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 74 LFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYV 125
+F M +K D V++N ++SG + +G +A + M + N I + L+ +V
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 126 HNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRKMLGAARKLFDKMHVR----DVV 177
G + EA L+ ++ ++N L+ GF LG A+ +FD M + DVV
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 178 SWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQM 233
++NT+I+G+ + + LF + +Q D FT+ ++ GY Q G L+ A+ F++M
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 234 ----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDI 285
+ ++YN ++ + K++ A + E + ++ ++N +I G + +
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 286 AQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 330
+A LF + ++ D +++ +ISG + G EA + +K DG
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 168/355 (47%), Gaps = 25/355 (7%)
Query: 145 LISWNCLMGGFVKRKMLGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLF- 199
+++ L+ GF + A L D M V +VV +NT+I+G ++ D++ A +F
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 200 ---DQSPHQDVFTWTAMVSGYVQNGM-LDEARTFFDQMPQK---NEISYNAMVAGYVQSN 252
+ D T+ ++SG +G D AR D + +K N I + A++ +V+
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Query: 253 KMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWA 304
+ AR L++ M R NV ++N++I G+ +G + A+ +FD+M + C V++
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 305 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 364
+I+G+ ++ E+ + +F E+ G + T++ + L + +++ ++V
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388
Query: 365 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQA 420
G N LL G I +A + E +++ D++++N +I G R K+A
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 421 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 475
+F S+ GVKPD I + ++S GL + M +D PS + Y
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED-GFMPSERIY 502
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 152/306 (49%), Gaps = 38/306 (12%)
Query: 2 RNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFS----LARDLFDKMPQRDLV 53
+N ++AL VF M ++ +V+YN +ISG + R++ L RD+ + +++
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 54 SWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGYAQNGYADEAREVFYQM 109
+ ++ +V+ L +AR L+ M ++ VV ++N++++G+ +G +A+ +F M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 110 PHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRKML 161
K + +++N L+ + + R+E+ +LF + L+ ++N L+ G+ + L
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 162 GAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAM 213
A+K+F++M D+V++N ++ +G + +A ++L D+ T+ +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 214 VSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGY----VQSNKMDMARELFEA-- 263
+ G + L EA F + +K + I+Y M++G +Q + R + E
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
Query: 264 MPSRNV 269
MPS +
Sbjct: 496 MPSERI 501
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 119/222 (53%), Gaps = 24/222 (10%)
Query: 1 MRNGHCDSALRVFNTMPRRSSV----SYNAMISGYLRNARFSLARDLFDKMPQR----DL 52
++ G+ A ++ M RRS V +YN++I+G+ + A+ +FD M + D+
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 53 VSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQ 108
V++N ++TG+ +++R+ D +LF M + D ++N ++ GY Q G + A++VF +
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 109 M----PHKNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKM 160
M + +++N LL +NG+IE+A + + S+ D ++I++N ++ G +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 161 LGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNL 198
L A LF + + D +++ TMISG + G +A L
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486