Miyakogusa Predicted Gene

Lj2g3v0661400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0661400.1 NODE_72169_length_1521_cov_10.831032.path1.1
         (474 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G06310.1 | Symbols: AtPOT1b | Nucleic acid-binding, OB-fold-l...   243   3e-64
AT2G05210.3 | Symbols: AtPOT1a | Nucleic acid-binding, OB-fold-l...   236   2e-62
AT2G05210.2 | Symbols: AtPOT1a | Nucleic acid-binding, OB-fold-l...   236   2e-62
AT2G05210.1 | Symbols: AtPOT1a, ATPOT1 | Nucleic acid-binding, O...   236   2e-62

>AT5G06310.1 | Symbols: AtPOT1b | Nucleic acid-binding, OB-fold-like
           protein | chr5:1928468-1930795 FORWARD LENGTH=454
          Length = 454

 Score =  243 bits (619), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 153/443 (34%), Positives = 236/443 (53%), Gaps = 19/443 (4%)

Query: 31  ANVFAVIVELGLSKRTKGTDYCLSLRVIDHTYNHSGMAVNIFTTNPILLHHHAAPGDIIR 90
            N+  VIVELG S    G+D   +L+++D  Y+ SG+ V         L    + GDII 
Sbjct: 25  VNLIGVIVELGFSN---GSDCSCTLKIVDPWYSGSGLPVKFVARTIRDLPRVESIGDIIL 81

Query: 91  LTQVTVDPFKDDLNLVFHKQISS-FALYKGKDANNFHPYQFSSKFIPGAEDQRFIAHLRR 149
           L++V +      +  + ++  SS FAL+ GK + +  PYQ S KF+   +D+ F+++LR 
Sbjct: 82  LSRVKIVLINRKITALCNETTSSSFALFNGKHSVDSIPYQSSPKFLMREQDKNFLSNLRE 141

Query: 150 WLVSFQFREDPSKFPMIREIKDG-FFGLACKILHCWEVTEDKWGFYVWDSTDAPPNTISS 208
           W+++++F +    F  +++IK+G    L+C+I+H  +V +D+W  +VWD T+ PP  I  
Sbjct: 142 WMITYKFEDGSCCFTSLKDIKEGECSNLSCQIVHISKVYKDRWYLFVWDGTEMPPCNILV 201

Query: 209 KLEDEINXXXXXXXXXXXXXRELLCTFPDVGTILLIIADPALVKSQLDVLNSGKWVKIVN 268
           K E                   +L  FP  G++L II D    K  +  L  G+ VK++N
Sbjct: 202 KSE-----RLPLCVEPEMLPTYMLRKFPTFGSVLRIIVDRVSEKQAIHCLQPGQHVKLLN 256

Query: 269 LHFEVHAGLWCGIFMPQTRLRYTPNEDSLIIKRQRLYKERMFLQSGRVPFSCSLPNSLSV 328
           L F+V+ GLW   F P T+++YT + +      QR+  E+   +   +    S  +S  +
Sbjct: 257 LFFQVNMGLWNATFTPSTKMQYTMSREMEAFSPQRMCGEKFSPRWNPIARCISRSHS-EI 315

Query: 329 TENTDESVRPMTLMGILTDSKVTAKYRCLVRVVAAMPCQAEMLPCPDDGIYKLLLTLEDP 388
           T    +    ++LM ILT   VTAK+RC+VR +   P     L    +G  KL+  LED 
Sbjct: 316 TGVAHDDAPFVSLMDILTYHNVTAKFRCVVRFIQVYPRDVRKLR-DINGNIKLVAILEDA 374

Query: 389 TARIRAHVFEKDGETFFDGYPS-TDVLTRKLNRLLGLAEGDGNMRVQDTPRNPPWLSVCI 447
           TARI A ++  +GE FF    S  + L +KLNRLLG  E      ++  PRNPPW+  C+
Sbjct: 375 TARIHASLYADEGEKFFGCDESDEEALVKKLNRLLGGEE------MEKVPRNPPWVQCCL 428

Query: 448 KAFYKVKTDPWGTRTYRIFDTKI 470
            +FYK K D W +R +RIFDT I
Sbjct: 429 FSFYKHKMDQWESRRFRIFDTWI 451


>AT2G05210.3 | Symbols: AtPOT1a | Nucleic acid-binding, OB-fold-like
           protein | chr2:1891814-1894196 FORWARD LENGTH=467
          Length = 467

 Score =  236 bits (602), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 157/459 (34%), Positives = 238/459 (51%), Gaps = 34/459 (7%)

Query: 31  ANVFAVIVELGLSKRTKGTDYCLSLRVIDHTYNHSGMAVNIFTTNPILLHHHAAPGDIIR 90
            ++  +++E    K+ +  D+  +LR+ID TY   G+ VN+F+     L       D+I 
Sbjct: 24  VSLIGIVLEQREPKQCRNNDWICTLRIIDDTYPSPGLTVNVFSKTLEQLPQIKNHDDMIL 83

Query: 91  LTQVTVDPFK--DDLNLVFHKQISSFALYKGKD------ANNFHPYQFSSKFIPGAEDQR 142
            T++ +  F   + +N    + +SSFAL++G D      + NFH  +  + +    +D R
Sbjct: 84  FTRIKMQTFDSGERVNAACSRWVSSFALFEGVDFVCYQCSTNFHEEE--ALYKSAMDDLR 141

Query: 143 FI----AHLRRWLVSFQFREDPSK--FPMIREIKDG-FFGLACKILHCWEVTEDKWGFYV 195
            +    + + + + S  +R  P    F  +REIK G  F L C+ILH     ED    +V
Sbjct: 142 KVFAGCSQVIKAMQSISYRTKPCSEVFSFLREIKIGKRFDLVCRILH---ADEDTSAVFV 198

Query: 196 WDSTDAPPNTISSKLEDEINXXXXXXXXXXXXXRELLCTFPDVGTILLIIADPALVKSQL 255
           WD TDAPP +I +K  +E +             R++L +FP VGTIL +     L     
Sbjct: 199 WDGTDAPPASILAKRSEE-DKAFSSLSVHTLLSRDVLLSFPTVGTILRVHLSSHLFYR-- 255

Query: 256 DVLNSGKWVKIVNLHFEVHAGLWCGIFMPQTRLRYTPNEDSLIIKRQRLYKERMFLQSGR 315
             +  G WVK+ +L  EV  G W       T++ +   +D L+ K  R+Y +R+  + G 
Sbjct: 256 --VKPGDWVKLYHLLCEVDRGSWVIKVTSSTKVHHLAQDDRLVEKIMRIYDKRLSSKLGH 313

Query: 316 VPFSCSLPNSLSVTENTDESVRPMTLMGILTDSKVTAKYRCLVRVVAAMPCQAEMLPCPD 375
           + F C  P+   +TE  D     +TLM I+T  KVT KYRC+VRVVAA P Q E   C D
Sbjct: 314 ISFWC-FPSPPGLTETDDNCAPFVTLMDIITFPKVTCKYRCIVRVVAAYPWQVEDF-CSD 371

Query: 376 DGI--YKLLLTLEDPTARIRAHVFEKDGETFFD-GYPSTDVLTRKLNRLLGLAEGDGNMR 432
           +    +++LLTLED TA + A +  KD E F+  G+  T+ L +K N LLG+ E    + 
Sbjct: 372 ENRRHHQVLLTLEDSTATLEAFLCNKDAEYFWGLGFQDTETLRKKRNWLLGIRESSNFV- 430

Query: 433 VQDTPRNPPWLSVCIKAFYKVKTDPWGTRTYRIFDTKIV 471
               PRNPPW+  CI ++Y  K DPW TR YRIF T+++
Sbjct: 431 ---APRNPPWIECCILSYYTNKADPWNTRLYRIFGTRLL 466


>AT2G05210.2 | Symbols: AtPOT1a | Nucleic acid-binding, OB-fold-like
           protein | chr2:1891814-1894196 FORWARD LENGTH=467
          Length = 467

 Score =  236 bits (602), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 157/459 (34%), Positives = 238/459 (51%), Gaps = 34/459 (7%)

Query: 31  ANVFAVIVELGLSKRTKGTDYCLSLRVIDHTYNHSGMAVNIFTTNPILLHHHAAPGDIIR 90
            ++  +++E    K+ +  D+  +LR+ID TY   G+ VN+F+     L       D+I 
Sbjct: 24  VSLIGIVLEQREPKQCRNNDWICTLRIIDDTYPSPGLTVNVFSKTLEQLPQIKNHDDMIL 83

Query: 91  LTQVTVDPFK--DDLNLVFHKQISSFALYKGKD------ANNFHPYQFSSKFIPGAEDQR 142
            T++ +  F   + +N    + +SSFAL++G D      + NFH  +  + +    +D R
Sbjct: 84  FTRIKMQTFDSGERVNAACSRWVSSFALFEGVDFVCYQCSTNFHEEE--ALYKSAMDDLR 141

Query: 143 FI----AHLRRWLVSFQFREDPSK--FPMIREIKDG-FFGLACKILHCWEVTEDKWGFYV 195
            +    + + + + S  +R  P    F  +REIK G  F L C+ILH     ED    +V
Sbjct: 142 KVFAGCSQVIKAMQSISYRTKPCSEVFSFLREIKIGKRFDLVCRILH---ADEDTSAVFV 198

Query: 196 WDSTDAPPNTISSKLEDEINXXXXXXXXXXXXXRELLCTFPDVGTILLIIADPALVKSQL 255
           WD TDAPP +I +K  +E +             R++L +FP VGTIL +     L     
Sbjct: 199 WDGTDAPPASILAKRSEE-DKAFSSLSVHTLLSRDVLLSFPTVGTILRVHLSSHLFYR-- 255

Query: 256 DVLNSGKWVKIVNLHFEVHAGLWCGIFMPQTRLRYTPNEDSLIIKRQRLYKERMFLQSGR 315
             +  G WVK+ +L  EV  G W       T++ +   +D L+ K  R+Y +R+  + G 
Sbjct: 256 --VKPGDWVKLYHLLCEVDRGSWVIKVTSSTKVHHLAQDDRLVEKIMRIYDKRLSSKLGH 313

Query: 316 VPFSCSLPNSLSVTENTDESVRPMTLMGILTDSKVTAKYRCLVRVVAAMPCQAEMLPCPD 375
           + F C  P+   +TE  D     +TLM I+T  KVT KYRC+VRVVAA P Q E   C D
Sbjct: 314 ISFWC-FPSPPGLTETDDNCAPFVTLMDIITFPKVTCKYRCIVRVVAAYPWQVEDF-CSD 371

Query: 376 DGI--YKLLLTLEDPTARIRAHVFEKDGETFFD-GYPSTDVLTRKLNRLLGLAEGDGNMR 432
           +    +++LLTLED TA + A +  KD E F+  G+  T+ L +K N LLG+ E    + 
Sbjct: 372 ENRRHHQVLLTLEDSTATLEAFLCNKDAEYFWGLGFQDTETLRKKRNWLLGIRESSNFV- 430

Query: 433 VQDTPRNPPWLSVCIKAFYKVKTDPWGTRTYRIFDTKIV 471
               PRNPPW+  CI ++Y  K DPW TR YRIF T+++
Sbjct: 431 ---APRNPPWIECCILSYYTNKADPWNTRLYRIFGTRLL 466


>AT2G05210.1 | Symbols: AtPOT1a, ATPOT1 | Nucleic acid-binding,
           OB-fold-like protein | chr2:1891814-1894196 FORWARD
           LENGTH=467
          Length = 467

 Score =  236 bits (602), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 157/459 (34%), Positives = 238/459 (51%), Gaps = 34/459 (7%)

Query: 31  ANVFAVIVELGLSKRTKGTDYCLSLRVIDHTYNHSGMAVNIFTTNPILLHHHAAPGDIIR 90
            ++  +++E    K+ +  D+  +LR+ID TY   G+ VN+F+     L       D+I 
Sbjct: 24  VSLIGIVLEQREPKQCRNNDWICTLRIIDDTYPSPGLTVNVFSKTLEQLPQIKNHDDMIL 83

Query: 91  LTQVTVDPFK--DDLNLVFHKQISSFALYKGKD------ANNFHPYQFSSKFIPGAEDQR 142
            T++ +  F   + +N    + +SSFAL++G D      + NFH  +  + +    +D R
Sbjct: 84  FTRIKMQTFDSGERVNAACSRWVSSFALFEGVDFVCYQCSTNFHEEE--ALYKSAMDDLR 141

Query: 143 FI----AHLRRWLVSFQFREDPSK--FPMIREIKDG-FFGLACKILHCWEVTEDKWGFYV 195
            +    + + + + S  +R  P    F  +REIK G  F L C+ILH     ED    +V
Sbjct: 142 KVFAGCSQVIKAMQSISYRTKPCSEVFSFLREIKIGKRFDLVCRILH---ADEDTSAVFV 198

Query: 196 WDSTDAPPNTISSKLEDEINXXXXXXXXXXXXXRELLCTFPDVGTILLIIADPALVKSQL 255
           WD TDAPP +I +K  +E +             R++L +FP VGTIL +     L     
Sbjct: 199 WDGTDAPPASILAKRSEE-DKAFSSLSVHTLLSRDVLLSFPTVGTILRVHLSSHLFYR-- 255

Query: 256 DVLNSGKWVKIVNLHFEVHAGLWCGIFMPQTRLRYTPNEDSLIIKRQRLYKERMFLQSGR 315
             +  G WVK+ +L  EV  G W       T++ +   +D L+ K  R+Y +R+  + G 
Sbjct: 256 --VKPGDWVKLYHLLCEVDRGSWVIKVTSSTKVHHLAQDDRLVEKIMRIYDKRLSSKLGH 313

Query: 316 VPFSCSLPNSLSVTENTDESVRPMTLMGILTDSKVTAKYRCLVRVVAAMPCQAEMLPCPD 375
           + F C  P+   +TE  D     +TLM I+T  KVT KYRC+VRVVAA P Q E   C D
Sbjct: 314 ISFWC-FPSPPGLTETDDNCAPFVTLMDIITFPKVTCKYRCIVRVVAAYPWQVEDF-CSD 371

Query: 376 DGI--YKLLLTLEDPTARIRAHVFEKDGETFFD-GYPSTDVLTRKLNRLLGLAEGDGNMR 432
           +    +++LLTLED TA + A +  KD E F+  G+  T+ L +K N LLG+ E    + 
Sbjct: 372 ENRRHHQVLLTLEDSTATLEAFLCNKDAEYFWGLGFQDTETLRKKRNWLLGIRESSNFV- 430

Query: 433 VQDTPRNPPWLSVCIKAFYKVKTDPWGTRTYRIFDTKIV 471
               PRNPPW+  CI ++Y  K DPW TR YRIF T+++
Sbjct: 431 ---APRNPPWIECCILSYYTNKADPWNTRLYRIFGTRLL 466