Miyakogusa Predicted Gene

Lj2g3v0661390.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0661390.1 Non Chatacterized Hit- tr|I1KQL1|I1KQL1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37670
PE,87.94,0,Sel1-like repeats.,Sel1-like; seg,NULL; SEL-1-LIKE PROTEIN,
SEL-1L,NULL; SEL-1-LIKE PROTEIN,NULL;
no,NODE_32550_length_2438_cov_148.211243.path1.1
         (666 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18260.1 | Symbols:  | HCP-like superfamily protein | chr1:62...   936   0.0  
AT1G73570.1 | Symbols:  | HCP-like superfamily protein | chr1:27...   768   0.0  
AT1G70590.1 | Symbols:  | F-box family protein | chr1:26618403-2...    55   2e-07

>AT1G18260.1 | Symbols:  | HCP-like superfamily protein |
           chr1:6279047-6282008 REVERSE LENGTH=678
          Length = 678

 Score =  936 bits (2419), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/620 (72%), Positives = 520/620 (83%), Gaps = 10/620 (1%)

Query: 25  ARPFVLVLSQEDFKDEAPTDS-DSAAEWDDFGDSDPHKSEDDLDPGSWRPIFXXXXXXXX 83
           ARP VLVLS +D       +    ++++D+FG+S+P KSE++LDPGSWR IF        
Sbjct: 25  ARPVVLVLSNDDLNSGGDDNGVGESSDFDEFGESEP-KSEEELDPGSWRSIFEPDDSTVQ 83

Query: 84  XXXXXXXXXGVAKLISXXXX-------XXXXXXXXXXXXXHPAAQSVLGFLWGMGLLRER 136
                    G+ K++S                         P AQS++GF++G+G++RE+
Sbjct: 84  AASPQYYS-GLKKILSAASEGNFRLMEEAVDEIEAASSAGDPHAQSIMGFVYGIGMMREK 142

Query: 137 SKSKGFLYHHFAAEGGNMQSKMALAYTYTRQDMFEKAVKLYGELAQVAVNSFLISKDSPV 196
           SKSK FL+H+FAA GGNMQSKMALA+TY RQDM +KAV+LY ELA+ AVNSFLISKDSPV
Sbjct: 143 SKSKSFLHHNFAAAGGNMQSKMALAFTYLRQDMHDKAVQLYAELAETAVNSFLISKDSPV 202

Query: 197 IEPVRLHNGAEENKEALRKSKGEEDDDFQILEYQAQKGNAAAMYKVGLFYYFGLRGLRRD 256
           +EP R+H+G EENK ALRKS+GEED+DFQILEYQAQKGNA AMYK+GLFYYFGLRGLRRD
Sbjct: 203 VEPTRIHSGTEENKGALRKSRGEEDEDFQILEYQAQKGNANAMYKIGLFYYFGLRGLRRD 262

Query: 257 HSKALSWFLKAVDKGEPRSMELLGEIYARGAGVDRNYTKAFEWLTLASKHHLYSAYNGMG 316
           H+KAL WFLKAVDKGEPRSMELLGEIYARGAGV+RNYTKA EWLTLA+K  LYSA+NG+G
Sbjct: 263 HTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKALEWLTLAAKEGLYSAFNGIG 322

Query: 317 YLYVKGYGVDKKNYTKAKEYFEMAADNDEVGGHYNLGVMYLKGIGVKRDVKLACKFFIVA 376
           YLYVKGYGVDKKNYTKA+EYFE A DN++  GHYNLGV+YLKGIGV RDV+ A K+F VA
Sbjct: 323 YLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQATKYFFVA 382

Query: 377 ANHGQPKAFYQLAKIFHLGVGFKKNIPLATALYKLVAERGPWSSLSRWALESYLKGDIGK 436
           AN GQPKAFYQLAK+FH GVG KKN+ +AT+ YKLVAERGPWSSLSRWALE+YLKGD+GK
Sbjct: 383 ANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVAERGPWSSLSRWALEAYLKGDVGK 442

Query: 437 AFMLYSRMAELGYEVAQSNAAWILDKYGERSMCMGEIGFCTDAERHQRAHSLWWQASEQG 496
           A +LYSRMAE+GYEVAQSNAAWILDKYGERSMCMG  GFCTD ERH+RAHSLWW+ASEQG
Sbjct: 443 ALILYSRMAEMGYEVAQSNAAWILDKYGERSMCMGVSGFCTDKERHERAHSLWWRASEQG 502

Query: 497 NEHAALLIGDAYYYGRGTNRDYERAAEAYMHAKLQSNAQAMFNLGYMHEHGHGLPFDLHM 556
           NEHAALLIGDAYYYGRGT RD+ RAAEAYMHAK QSNAQAMFNLGYMHEHG GLPFDLH+
Sbjct: 503 NEHAALLIGDAYYYGRGTERDFVRAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPFDLHL 562

Query: 557 AKRYYDEALEHDAAAKLPVTLALTSLWVRKNYADSFLVGMIDSLPDVYPKLEAWVEDVLL 616
           AKRYYDE+L+ DAAA+LPVTLAL SLW+R+NYAD+ LV ++DSLP+VYPK+E W+E+V+ 
Sbjct: 563 AKRYYDESLQSDAAARLPVTLALASLWLRRNYADTVLVRVVDSLPEVYPKVETWIENVVF 622

Query: 617 EEGNATILTLFVCLLTVLYL 636
           EEGNATILTLFVCL+T+LYL
Sbjct: 623 EEGNATILTLFVCLITILYL 642


>AT1G73570.1 | Symbols:  | HCP-like superfamily protein |
           chr1:27650992-27653942 FORWARD LENGTH=604
          Length = 604

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/605 (62%), Positives = 455/605 (75%), Gaps = 58/605 (9%)

Query: 25  ARPFVLVLSQED----FKDEAPTDSDSAAEWDDFGDSDPHKSEDDLDPGSWRPIFXXXXX 80
           ARPFVLVLS ED    F D    +S   +++D+FG+S+P KSE++LDPGSWR IF     
Sbjct: 25  ARPFVLVLSNEDLNGGFNDNGAYES---SDFDEFGESEP-KSEEELDPGSWRRIFETNES 80

Query: 81  XXXXXXXXXXXXGVAKLISXXXXXXXXXXX-------XXXXXXHPAAQSVLGFLWGMGLL 133
                       G+ K++S                         P AQSV+GF++G+G++
Sbjct: 81  TVHASASPQYYSGLHKILSAASEGNTTLMEEAVSEIDSSASSGDPHAQSVMGFVYGIGMM 140

Query: 134 RERSKSKGFLYHHFAAEGGNMQSKMALAYTYTRQDMFEKAVKLYGELAQVAVNSFLISKD 193
           RE S+SK  L+HHFAA GGNMQSKMALA+ Y RQ+M++KAV+LY ELA+ AVNSFLISKD
Sbjct: 141 RETSRSKSILHHHFAAAGGNMQSKMALAFRYLRQNMYDKAVELYAELAETAVNSFLISKD 200

Query: 194 SPVIEPVRLHNGAEENKEALRKSKGEEDDDFQILEYQAQKGNAAAMYKVGLFYYFGLRGL 253
           SP+ EPVR+H G EENK+ALRKS+GEED+DFQILEYQA+KGN+ AM+K+GLFYYFGLRGL
Sbjct: 201 SPMAEPVRIHIGTEENKDALRKSRGEEDEDFQILEYQAEKGNSVAMHKIGLFYYFGLRGL 260

Query: 254 RRDHSKALSWFLKAVDKGEPRSMELLGEIYARGAGVDRNYTKAFEWLTLASKHHLYSAYN 313
           R                                    R++ KA  W + A        +N
Sbjct: 261 R------------------------------------RDHAKALYWFSKAE-------FN 277

Query: 314 GMGYLYVKGYGVDKKNYTKAKEYFEMAADNDEVGGHYNLGVMYLKGIGVKRDVKLACKFF 373
           G+GYLYVKGYGVDK+NYTKA+EYFEMAA+N++  GHYNLGV+YLKG GVK+DV+ A K+F
Sbjct: 278 GLGYLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHATKYF 337

Query: 374 IVAANHGQPKAFYQLAKIFHLGVGFKKNIPLATALYKLVAERGPWSSLSRWALESYLKGD 433
            VAAN GQPKAFYQLAK+FH GVG  KN+ +AT  YKLVAERGPWSSLSRWALE+YLKGD
Sbjct: 338 FVAANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFYKLVAERGPWSSLSRWALEAYLKGD 397

Query: 434 IGKAFMLYSRMAELGYEVAQSNAAWILDKYGERSMCMGEIGFCTDAERHQRAHSLWWQAS 493
           +GKAF+LYSRM+ELGYEVAQSNAAWI+DKYGERSMCMG  GFCTD ERH RAHSLWW+AS
Sbjct: 398 VGKAFILYSRMSELGYEVAQSNAAWIVDKYGERSMCMGVYGFCTDKERHDRAHSLWWRAS 457

Query: 494 EQGNEHAALLIGDAYYYGRGTNRDYERAAEAYMHAKLQSNAQAMFNLGYMHEHGHGLPFD 553
           EQGNEHAALLIGDAYYYGRGT RD+ RAAEAYM+AK QSNAQAMFNLGYMHEHG GLPFD
Sbjct: 458 EQGNEHAALLIGDAYYYGRGTERDFVRAAEAYMYAKSQSNAQAMFNLGYMHEHGEGLPFD 517

Query: 554 LHMAKRYYDEALEHDAAAKLPVTLALTSLWVRKNYADSFLVGMIDSLPDVYPKLEAWVED 613
           LH+AKRYYD+AL+ D AAKLPVTLAL S+WVR+NYAD+ LV +++SLP+V+ K+  WVE+
Sbjct: 518 LHLAKRYYDQALQSDTAAKLPVTLALASVWVRRNYADTALVQVLNSLPEVHQKVVEWVEN 577

Query: 614 VLLEE 618
            +LEE
Sbjct: 578 GMLEE 582


>AT1G70590.1 | Symbols:  | F-box family protein |
           chr1:26618403-26620159 FORWARD LENGTH=351
          Length = 351

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 10/217 (4%)

Query: 239 MYKVGLFYYFGLRGLRRDHSKALSWFLKAVDKGEPRSMELLGEIY-ARGAGVDRNYTKAF 297
           + + G  Y  G  G+R +  KAL  FLK   +G   +M   G +Y  RG        KA 
Sbjct: 108 LIRWGKKYKHGRGGVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERG-----EKEKAV 162

Query: 298 EWLTLASKHHLYSAYNGMGYLYVKGYGVDKKNYTKAKEYFEMAADNDEVGGHYNLGVMYL 357
                AS+         +G  Y++   V   N  +A ++ + +A+N  V   Y L +   
Sbjct: 163 NLYRRASELGDAVGQCNLGIAYLQ---VQPSNPKEAMKWLKQSAENGYVRAQYQLALCLH 219

Query: 358 KGIGVKRDVKLACKFFIVAANHGQPKAFYQLAKIFHLGVGFKKNIPLATALYKLVAERGP 417
            G  V+ ++  A K+++ AA  G  +A Y ++  + +G G  +N  LA    K  A+ G 
Sbjct: 220 HGRVVQTNLLEATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGH 279

Query: 418 WSSLSRWALESYLKGDIGKAFMLYSRMAELGYEVAQS 454
             +     L  + +G++ K+ +LY  +AE G E A +
Sbjct: 280 SKAQFEHGLALFSEGEMLKS-VLYLELAERGGEAAAT 315