Miyakogusa Predicted Gene

Lj2g3v0659280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0659280.1 Non Chatacterized Hit- tr|G7KQA5|G7KQA5_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,72.06,4e-18,
,CUFF.35169.1
         (71 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67920.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    56   4e-09

>AT1G67920.1 | Symbols:  | unknown protein; BEST Arabidopsis
          thaliana protein match is: unknown protein
          (TAIR:AT1G24600.1); Has 22 Blast hits to 22 proteins in
          5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
          - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0
          (source: NCBI BLink). | chr1:25473731-25473934 FORWARD
          LENGTH=67
          Length = 67

 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 7/65 (10%)

Query: 7  NEDGSFSQKGVPIHSQVRKIKQESEKVVDWSPGQPEMRPVLRDIS-RQISRSPLGISGRP 65
          NEDG        IHSQV KIK+E EK+   S  QPEMR VL +I  RQ SRSPLG+  R 
Sbjct: 9  NEDGPI------IHSQVEKIKKEFEKIRQPSLQQPEMRRVLSEIKRRQRSRSPLGLGERS 62

Query: 66 ISVGD 70
          ISVG+
Sbjct: 63 ISVGN 67