Miyakogusa Predicted Gene

Lj2g3v0658160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0658160.1 tr|G7KQB2|G7KQB2_MEDTR Transcriptional repressor
NF-X1-like protein OS=Medicago truncatula
GN=MTR_6g,71.3,0,ZF_PHD_2,Zinc finger, PHD-finger; ZF_RING_2,Zinc
finger, RING-type; no description,Zinc finger, NF-X,CUFF.35157.1
         (1121 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G10170.1 | Symbols: ATNFXL1, NFXL1 | NF-X-like 1 | chr1:33339...  1276   0.0  
AT5G05660.1 | Symbols: ATNFXL2 | sequence-specific DNA binding t...   244   3e-64

>AT1G10170.1 | Symbols: ATNFXL1, NFXL1 | NF-X-like 1 |
            chr1:3333925-3337491 REVERSE LENGTH=1188
          Length = 1188

 Score = 1276 bits (3303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 659/1054 (62%), Positives = 763/1054 (72%), Gaps = 46/1054 (4%)

Query: 86   HRRNNQKVXXXXXXXXXXDRGKSRNQPGR-----EVGLRDTSLPQLVQEIQEKLMRGTVE 140
             RRNN              R +  NQ  R      V L D +LPQLVQE+QEKL++ ++E
Sbjct: 163  QRRNNASGTLPDNRQRVASRTRPVNQGKRVAKEENVVLTDPNLPQLVQELQEKLVKSSIE 222

Query: 141  CMICYDMVGRSAAIWSCSSCYSIFHLSCIKKWARAPTSVDLTADKDQGFNWRCPGCQYVQ 200
            CMICYD VGRSA IWSCSSCYSIFH++CIK+WARAPTSVDL A+K+QG NWRCPGCQ VQ
Sbjct: 223  CMICYDKVGRSANIWSCSSCYSIFHINCIKRWARAPTSVDLLAEKNQGDNWRCPGCQSVQ 282

Query: 201  RTSHREIRYVCFCGKRPDPPSDLYLTPHSCGEPCGKPLEKEVLAAGGREDDLCPHVCVLQ 260
             TS +EI Y CFCGKR DPPSD YLTPHSCGEPCGKPLEKE   A   E+DLCPHVCVLQ
Sbjct: 283  LTSSKEISYRCFCGKRRDPPSDPYLTPHSCGEPCGKPLEKEFAPAETTEEDLCPHVCVLQ 342

Query: 261  CHPGPCPPCKAFAPPRLCPCGKKRITTRCSDRKSVLTCGQCCDKLLECGRHRCQQTCHVG 320
            CHPGPCPPCKAFAPPR CPCGKK +TTRCS+R+S L CGQ CDKLL CGRH+C++TCHVG
Sbjct: 343  CHPGPCPPCKAFAPPRSCPCGKKMVTTRCSERRSDLVCGQRCDKLLSCGRHQCERTCHVG 402

Query: 321  PCGPCQVLFKASCFCSKTTEVLGCGDMVVKGELKEEGGVFXXXXXXXXXXXXXNHVCSDM 380
            PC PCQVL  A+CFC K  E + CGDM VKGELK E GV+             NH CS++
Sbjct: 403  PCDPCQVLVNATCFCKKKVETVICGDMNVKGELKAEDGVYSCSFNCGKPLGCGNHFCSEV 462

Query: 381  CHPGSCGECELLPSRVKTCCCGKTRLEVD-RESCLDPIPTCSQVCDKLLHCGKHTCKEHC 439
            CHPG CG+C+LLPSRVKTC CG TRLE   R+SCLDPIP+CS VC KLL C  HTC E C
Sbjct: 463  CHPGPCGDCDLLPSRVKTCYCGNTRLEEQIRQSCLDPIPSCSNVCRKLLPCRLHTCNEMC 522

Query: 440  HVGECPPCLVLVSQKCRCSSTSRTVECFKTV-MENQMFTCEKPCGRKKNCGRHRCSEKCC 498
            H G+CPPCLV V+QKCRC STSR VEC+ T   E + F C KPCGRKKNCGRHRCSE+CC
Sbjct: 523  HAGDCPPCLVQVNQKCRCGSTSRAVECYITTSSEAEKFVCAKPCGRKKNCGRHRCSERCC 582

Query: 499  PLSN-PNNNLREGWDPHFCSMPCGKKLRCGQHACESLCHSGHCPPCLETIFTDLSCACGR 557
            PL N   N+L   WDPH C +PC KKLRCGQH+CESLCHSGHCPPCLE IFTDL+CACGR
Sbjct: 583  PLLNGKKNDLSGDWDPHVCQIPCQKKLRCGQHSCESLCHSGHCPPCLEMIFTDLTCACGR 642

Query: 558  TSIXXXXXXXXXXXSCQLPCSVAQPCGHAGSHSCHFGDCIPCPVPVAKECIGGHVVLRNI 617
            TSI           SCQLPC + QPCGH+ +H CHFGDC PC  PV K+C+GGHVVLRNI
Sbjct: 643  TSIPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGCHFGDCPPCSTPVEKKCVGGHVVLRNI 702

Query: 618  PCGSKDIRCNNPCGRTRQCGLHACGRTCHPPPCDSLSGGVQGFQAPCGQTCSAPRRDCRH 677
            PCG KDIRC   CG+TR+CG+HAC RTCHP PCDS +    G +  C Q C APR DCRH
Sbjct: 703  PCGLKDIRCTKICGKTRRCGMHACARTCHPEPCDSFNESEAGMRVTCRQKCGAPRTDCRH 762

Query: 678  TCMAPCHPSSPCPDIKCEFPVTITCSCGRITASVPCDAGG---SISNYNADAIHEASIVQ 734
            TC A CHPS+PCPD++CEF VTITCSCGRITA+VPCDAGG   + SN    A  EAS++Q
Sbjct: 763  TCAALCHPSAPCPDLRCEFSVTITCSCGRITATVPCDAGGRSANGSNVYCAAYDEASVLQ 822

Query: 735  KLPVPLQPVDSNGRKVPLGQRKLMCDEECAKYERKKVLADAFDIT-SGLDSLHFAE-SSV 792
            KLP PLQPV+S+G ++PLGQRKL CD+ECAK ERK+VL DAFDIT   L++LHF+E S++
Sbjct: 823  KLPAPLQPVESSGNRIPLGQRKLSCDDECAKLERKRVLQDAFDITPPNLEALHFSENSAM 882

Query: 793  SELLSDMFRRDPKWVLAVEERCKFLVLGKSRGTTHGLKVHVFCPMLKDKRDAVRLIAERW 852
            +E++SD++RRDPKWVLAVEERCKFLVLGK+RG+T  LKVH+FCPM KDKRD VRLIAERW
Sbjct: 883  TEIISDLYRRDPKWVLAVEERCKFLVLGKARGSTSALKVHIFCPMQKDKRDTVRLIAERW 942

Query: 853  KLAVNAAGWEPKRFIVISVTQKSKAPARVLGVK-GTTTLNTLFPPAFDPLVDMDPRLVVS 911
            KL V+ AGWEPKRF V+ VT KSK P R++G + G  ++    PP +D LVDMDP LVVS
Sbjct: 943  KLGVSNAGWEPKRFTVVHVTAKSKPPTRIIGARGGAISIGGPHPPFYDSLVDMDPGLVVS 1002

Query: 912  FPDLPRDADISALVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLDHGKVYQXXXXX 971
            F DLPR+A+ISALVLRFGGECELVWLNDKNALAVFHD ARAATAMRRL+HG VY      
Sbjct: 1003 FLDLPREANISALVLRFGGECELVWLNDKNALAVFHDHARAATAMRRLEHGSVYH----- 1057

Query: 972  XXXXXXXXXXXXXXXXXXXXXVKEGGALTALKGNPWKKAVVQEAGRKEDSWGDEEWATTG 1031
                                 +    A    KGNPW++AV+QE+   +DSWG E+    G
Sbjct: 1058 -GAVVVQSGGQSPSLNNVWGKLPGSSAWDVDKGNPWRRAVIQES---DDSWGAEDSPIGG 1113

Query: 1032 SA-NIQPSVLKKA---APITASLNRWNVLNQEXXXXXXVTTGRAEVSGKQKESSAVSKSV 1087
            S+ + Q S L+ A   +PI  S+NRW+VL  +       +T   E   + +ESS+     
Sbjct: 1114 SSTDAQASALRSAKSNSPIVTSVNRWSVLEPK-----KASTSTLEPIAQIEESSS----- 1163

Query: 1088 SDAGGSNEEGKQHGDNSDAAEVPEVVDDWEKAYE 1121
                 S   GKQ  + S      EVVDDWEK  E
Sbjct: 1164 -----SKTTGKQPVEGSGE----EVVDDWEKVCE 1188


>AT5G05660.1 | Symbols: ATNFXL2 | sequence-specific DNA binding
           transcription factors;zinc ion binding;sequence-specific
           DNA binding transcription factors | chr5:1691113-1695464
           REVERSE LENGTH=880
          Length = 880

 Score =  244 bits (623), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 210/672 (31%), Positives = 279/672 (41%), Gaps = 128/672 (19%)

Query: 127 VQEIQEKLMRGTVECMICYDMVGRSAAIWSC-SSCYSIFHLSCIKKWARAPTSVDLTADK 185
           +Q        G V C+IC + + R+   WSC SSC+++FHL CI+ WAR    +DL A +
Sbjct: 70  IQSFLASSSSGAVSCLICLERIKRTDPTWSCTSSCFAVFHLFCIQSWAR--QCLDLQAAR 127

Query: 186 ----------DQGFNWRCPGCQYVQRTSHREIRYVCFCGKRPDPPSDL-YLTPHSCGEPC 234
                     +    W CP C+   + S    RY+C+CGK  DPP+D  ++ PHSCGE C
Sbjct: 128 AVTRPSSNPTEPEAVWNCPKCRSSYQKSKIPRRYLCYCGKEEDPPADNPWILPHSCGEVC 187

Query: 235 GKPLEKEVLAAGGREDDLCPHVCVLQCHPGPCPPCKAFAPPRLCPCGKKRITTRCSDRKS 294
            +PL            + C H C+L CHPGPC  C      + C CG      RC  ++ 
Sbjct: 188 ERPL-----------SNNCGHCCLLLCHPGPCASCPKLVKAK-CFCGGVEDVRRCGHKQ- 234

Query: 295 VLTCGQCCDKLLECGRHRCQQTCHVGPCGPCQVLFKASCFCSKTTEVLGCGDMVVKGELK 354
             +CG  C+++L+C  H C++ CH G C PC+      C C K  E   C + V + E  
Sbjct: 235 -FSCGDVCERVLDCNIHNCREICHDGECPPCRERAVYKCSCGKVKEEKDCCERVFRCEAS 293

Query: 355 EEGGVFXXXXXXXXXXXXXNHVCSDMCHPGSCGECELLPSRVKTCCCGKTRLEVDRESCL 414
            E  +               HVC   CH G CG C     R  +C CGK   +    SC 
Sbjct: 294 CENML-----------NCGKHVCERGCHAGECGLCPYQGKR--SCPCGKRFYQG--LSCD 338

Query: 415 DPIPTCSQVCDKLLHCGKHTCKEHCHVGEC-PPCLVLVSQKCRCSSTSRTVECFKTVMEN 473
              P C   CDK+L CG H C E CH G C   C ++V++ CRC  T + V C      +
Sbjct: 339 VVAPLCGGTCDKVLGCGYHRCPERCHRGPCLETCRIVVTKSCRCGVTKKQVPC------H 392

Query: 474 QMFTCEKPCGRKKNCGRHRCSEKCCPLSNPNNNLREGWDPHFCSMPCGKKLRCGQHACES 533
           Q   CE+ C R ++C RH C  +CC    P            CS  CGKKLRC  H C+S
Sbjct: 393 QELACERKCQRVRDCARHACRRRCCDGECPP-----------CSEICGKKLRCRNHKCQS 441

Query: 534 LCHSGHCPPCLETIFTDLSCACGRT--SIXXXXXXXXXXXSCQLPCSVAQPCGHAGS--- 588
            CH G C PC   I   +SCACG T   +            C+  C +   C H  +   
Sbjct: 442 PCHQGPCAPC--PIMVTISCACGETHFEVPCGTETNQKPPRCRKLCHITPLCRHGQNQKP 499

Query: 589 HSCHFGDCIP-------------------------------------------------- 598
           H CH+G C P                                                  
Sbjct: 500 HKCHYGACPPCRLLCDEEYPCGHKCKLRCHGPRPPPNREFILKPTKKMLHIQAESTPGSP 559

Query: 599 ---CPVPVAKECIGGHVVL--RNIPCGSKDIRCNNPCGRTRQCGLHACGRTCHPPPCDSL 653
              CP PV + C+G H+    R I        C+N CG    CG H C   CH     S 
Sbjct: 560 CPRCPEPVWRPCVGHHLAAEKRMICSDRTQFACDNLCGNPLPCGNHYCSYFCHALDIRSS 619

Query: 654 SGGVQGFQ-APCGQTCSAPRR-DCRHTCMAPCHPSSPCPDIKCEFPVTITCSCGRITASV 711
           S   +      C   C   R   C+H C   CHP   CP   C+  V  +C CG +  + 
Sbjct: 620 SLDKRSESCEKCDLRCQKERTPRCQHPCPRRCHPED-CPP--CKTLVKRSCHCGAMVHAF 676

Query: 712 PCDAGGSISNYN 723
            C    ++S  +
Sbjct: 677 ECIYYNTMSEKD 688



 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 162/448 (36%), Gaps = 83/448 (18%)

Query: 255 HVCVLQCHPGPCPPCKAFAPPRLCPCGKKRITTRCSDRKSVLTCGQCCDKLLECGRHRCQ 314
           HVC   CH G C  C  +   R CPCGK+       D  + L CG  CDK+L CG HRC 
Sbjct: 303 HVCERGCHAGECGLC-PYQGKRSCPCGKRFYQGLSCDVVAPL-CGGTCDKVLGCGYHRCP 360

Query: 315 QTCHVGPC-GPCQVLFKASCFCSKTTEVLGC-GDMVVKGELKE--------------EGG 358
           + CH GPC   C+++   SC C  T + + C  ++  + + +               +G 
Sbjct: 361 ERCHRGPCLETCRIVVTKSCRCGVTKKQVPCHQELACERKCQRVRDCARHACRRRCCDGE 420

Query: 359 VFXXXXXXXXXXXXXNHVCSDMCHPGSCGECELLPSRVKTCCCGKTRLEV--DRESCLDP 416
                          NH C   CH G C  C ++ +   +C CG+T  EV    E+   P
Sbjct: 421 CPPCSEICGKKLRCRNHKCQSPCHQGPCAPCPIMVT--ISCACGETHFEVPCGTETNQKP 478

Query: 417 IPTCSQVCDKLLHC--GKHTCKEHCHVGECPPCLVLVSQKCRCSSTSR------------ 462
            P C ++C     C  G++     CH G CPPC +L  ++  C    +            
Sbjct: 479 -PRCRKLCHITPLCRHGQNQKPHKCHYGACPPCRLLCDEEYPCGHKCKLRCHGPRPPPNR 537

Query: 463 --TVECFKTVMENQM-FTCEKPCGR------KKNCGRHRCSEKCCPLSNPNNNLREGWDP 513
              ++  K ++  Q   T   PC R      +   G H  +EK          +      
Sbjct: 538 EFILKPTKKMLHIQAESTPGSPCPRCPEPVWRPCVGHHLAAEK--------RMICSDRTQ 589

Query: 514 HFCSMPCGKKLRCGQHACESLCHSGHCPPCLETIFTDLSCACGRTSIXXXXXXXXXXXSC 573
             C   CG  L CG H C   CH+      L+   + L                     C
Sbjct: 590 FACDNLCGNPLPCGNHYCSYFCHA------LDIRSSSLD------------KRSESCEKC 631

Query: 574 QLPCSVAQP--CGHAGSHSCHFGDCIPCPVPVAKECIGGHVV------LRNIPCGSKDIR 625
            L C   +   C H     CH  DC PC   V + C  G +V        N       ++
Sbjct: 632 DLRCQKERTPRCQHPCPRRCHPEDCPPCKTLVKRSCHCGAMVHAFECIYYNTMSEKDQMK 691

Query: 626 ---CNNPCGRTRQCGLHACGRTCHPPPC 650
              C  PC R      H C   CHP  C
Sbjct: 692 ARSCRGPCHRKLPNCTHLCPEICHPGQC 719