Miyakogusa Predicted Gene

Lj2g3v0658080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0658080.1 Non Chatacterized Hit- tr|I1KJ84|I1KJ84_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2418
PE=,91.88,0,DHO_dh,Dihydroorotate dehydrogenase, class 1/ 2; no
description,Aldolase-type TIM barrel; FMN-linked,CUFF.35158.1
         (395 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17810.1 | Symbols: PYD1 | pyrimidine 1 | chr3:6094279-609628...   660   0.0  

>AT3G17810.1 | Symbols: PYD1 | pyrimidine 1 | chr3:6094279-6096289
           FORWARD LENGTH=426
          Length = 426

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/400 (79%), Positives = 354/400 (88%), Gaps = 8/400 (2%)

Query: 1   MASLSMTQVRTGKSASGFSLNCPGKVQAR-----PSRVGFRVFASEAQVPEPDLSVTVNG 55
           MAS+S    R    +S  +L+      +R     P+RVG ++  S A   EPDLSVTVNG
Sbjct: 1   MASMSFALNRFSGLSSKTTLSADFDPSSRRSFLPPTRVGLKI--SSAAESEPDLSVTVNG 58

Query: 56  LHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRAGANG 115
           L MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDA+KVINVTPRYARLR G+NG
Sbjct: 59  LKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYARLRTGSNG 118

Query: 116 SAKGEIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVE 175
           SAK ++IGW+NIELISDRPLETMLKEF++LK+EYPDRILIAS+MEEYNK AWEELIDRVE
Sbjct: 119 SAKTDVIGWQNIELISDRPLETMLKEFERLKKEYPDRILIASVMEEYNKTAWEELIDRVE 178

Query: 176 QTGIDAIEINFSCPHGMPERKMGAAVGQDCALLEEVCRWINAKATVPVWAKMTPNITDIS 235
           QTG+DA+EINFSCPHGMPER+MGAAVGQDCALL+EVC WINAKATVPVWAKMTPNITDI+
Sbjct: 179 QTGVDALEINFSCPHGMPERRMGAAVGQDCALLDEVCGWINAKATVPVWAKMTPNITDIT 238

Query: 236 EPARVALSSGCEGVAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIALAKVM 295
           EPARV+L SGCEG+AAINTIMSVMGI++ TLRPEPCVEGYSTPGGYS KAV PIALAKVM
Sbjct: 239 EPARVSLKSGCEGIAAINTIMSVMGIDMKTLRPEPCVEGYSTPGGYSYKAVRPIALAKVM 298

Query: 296 SIAKMMKSEFDSEDYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCVE 355
           +IAKMMKSEF SED SLS IGGVETG DAAEFILLG+NTVQVCTGVMMHGYG VK LC E
Sbjct: 299 NIAKMMKSEF-SEDRSLSGIGGVETGYDAAEFILLGSNTVQVCTGVMMHGYGHVKTLCAE 357

Query: 356 LQDFMKKHNFTSIEDFRGTSLQYFTTHTDLVQRQQEAIRQ 395
           L+DFMK+HNF++IE+FRG SLQYFTTHTDLV+RQ+EA+ Q
Sbjct: 358 LKDFMKQHNFSTIEEFRGHSLQYFTTHTDLVKRQKEAVEQ 397