Miyakogusa Predicted Gene
- Lj2g3v0637020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0637020.1 tr|G7IND7|G7IND7_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_2g0,28.38,1e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; seg,NULL; FAMILY NOT NAMED,NULL;
PPR,,CUFF.35179.1
(317 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 427 e-120
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 114 7e-26
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 6e-23
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 8e-23
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 6e-22
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 8e-22
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 9e-22
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 9e-22
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 9e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 6e-21
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 8e-21
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 96 4e-20
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 95 7e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 93 2e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 3e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 3e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 4e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 7e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 8e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 90 2e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 6e-18
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 6e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 8e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 9e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 1e-17
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 2e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 6e-17
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 84 2e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 82 3e-16
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 82 4e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 82 7e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 81 1e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 1e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 78 7e-15
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 7e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 7e-15
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 76 4e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 8e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 73 3e-13
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 6e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 8e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 8e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 9e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 9e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 9e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 9e-13
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 7e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 65 9e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 9e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 64 1e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 60 2e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 58 1e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 57 2e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 55 4e-08
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 54 1e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 1e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 52 4e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 51 1e-06
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 1e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 427 bits (1097), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/321 (63%), Positives = 246/321 (76%), Gaps = 4/321 (1%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGK 60
ME DYGLKRD+ SL +VV+KLC KG AS AE+MVK+ A IFPDE +CD+LI GWC+ K
Sbjct: 201 MENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEK 260
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
L+EA RLAGEM RGGFE+G AYN MLDCVC+LCR+KDPF L E EKVL+EM++RGVPR
Sbjct: 261 LDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPR 320
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
N ETFNVLI NLCKIR+TE+A+ LF RMGEWGC P+ T++VLIRSLYQAAR+ EGDEMI
Sbjct: 321 NTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMI 380
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
D+MKSAG+G L+KK YY FL ILCGIER+EHA+ VF MKA+GC+PGIKTYDLLM K+
Sbjct: 381 DKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMC 440
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKEYAVDPRYXXXXXX---XXXXXRETLPEKMAXXXX 297
A+N++ +AN L+ EA +G+AV+PKEY VDPR+ RETLPEK A
Sbjct: 441 ANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMKKKTKEVDSNVKKRETLPEKTARKKK 500
Query: 298 XXXXXXXSYVKKP-KRMRGRV 317
S+VKKP +MR R+
Sbjct: 501 RLKQINMSFVKKPHNKMRRRM 521
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 139/268 (51%), Gaps = 3/268 (1%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDE-AMCDMLIKGWCVDGKLEE 63
+ +D ++ ++ LCS+G A ++ VI +E ++ L+ GW V ++E
Sbjct: 167 FSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKE 226
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
ARR+ +M G + +N++L C+CE ++P L EA +++EM +
Sbjct: 227 ARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSM 286
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
++N+L++ L + R+ ++ ++ +M GC P+ ++ ++R LY R +G++++D M
Sbjct: 287 SYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEM 346
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
GF ++K YY + +LCG+ERV AL++F MK + YDLL+ KL
Sbjct: 347 IERGFRP--ERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGG 404
Query: 244 RVDKANALFHEAQSRGLAVTPKEYAVDP 271
+K L+ EA S + ++ +DP
Sbjct: 405 NFEKGRELWEEALSIDVTLSCSISLLDP 432
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 10/254 (3%)
Query: 15 KVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
++ LC + A + + L ++ I PD + LI+G C+ A L EM
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
G E YN ++D +C + EA +L +M+ G R+V T+N LI C
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKL-------DEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
K KT +A ++F M G N T+ LI L ++ R+E+ +++D+M G D
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG--QKPD 539
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
K Y LT C ++ A + M ++GCEP I TY L+S L RV+ A+ L
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 254 EAQSRGLAVTPKEY 267
Q +G+ +TP Y
Sbjct: 600 SIQMKGINLTPHAY 613
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 11/259 (4%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEE 63
YGL D + V++ +G A R+ + + ++++ G+C +G++E+
Sbjct: 218 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277
Query: 64 ARRLAGEMY-RGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
A EM + GF +N +++ +C+ K A +++ M G +V
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK-------HAIEIMDVMLQEGYDPDV 330
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N +I+ LCK+ + ++A+++ +M C PN T+ LI +L + ++EE E+
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+ S G D + + LC A+++F M++ GCEP TY++L+ L +
Sbjct: 391 LTSKGILP--DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 243 NRVDKANALFHEAQSRGLA 261
++D+A + + + G A
Sbjct: 449 GKLDEALNMLKQMELSGCA 467
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 49/250 (19%)
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
M ++L+ G + KL E +M G + V +N ++ +C Q P +L
Sbjct: 160 MLNLLVDGNSL--KLVEISH--AKMSVWGIKPDVSTFNVLIKALCR-AHQLRPAIL---- 210
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGC------------- 153
+L +M G+ + +TF ++ + + AL++ +M E+GC
Sbjct: 211 --MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 154 -----------------------YPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
+P++ TF L+ L +A ++ E++D M G+
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
D Y ++ LC + V+ A++V M C P TY+ L+S L N+V++A
Sbjct: 329 --DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 251 LFHEAQSRGL 260
L S+G+
Sbjct: 387 LARVLTSKGI 396
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 5 YGLKRDRGSLKVVVEKLC-SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
+G+ R+ + +++ LC S+ A+ M + + PD+ + L+ +C G +++
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A + M G E +V Y ++ +C+ R + A K+L + +G+
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE-------VASKLLRSIQMKGINLTPH 611
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWG-CYPNETTFVVLIRSL 167
+N +I L + RKT +A+ LF M E P+ ++ ++ R L
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++ L AS A +V + + + PD +++ G C G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M +G E GVV YN ++D +C D A + EMD +G+ NV T
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND-------ALNLFTEMDNKGIRPNVVT 293
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI LC + DA +L M E PN TF LI + + +L E +++ D M
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
D Y + C +R++ A +F +M + C P + TY+ L+ R
Sbjct: 354 KRSIDP--DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
VD+ LF E RGL Y
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTT 436
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ + + ++ LC+ G S A R++ D+ R I P+ LI + +GKL EA
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM + + + Y+++++ C R EA+ + M + NV T
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-------DEAKHMFELMISKDCFPNVVT 398
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI CK ++ ++ ++LF M + G N T+ LI +QA + + +M
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G D Y L LC +VE AL VF ++ EP I TY++++ + +
Sbjct: 459 SDGVLP--DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V+ LF +G+ Y
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTT 541
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 117/280 (41%), Gaps = 31/280 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + +VV LC +G A ++K + + I P + + +I C + +A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-------------------- 104
L EM G VV YN+++ C+C R D L S
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
EAEK+ EM R + ++ T++ LI C + ++A +F M C+PN
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ LI+ +A R++EG E+ M G + Y + ++A V
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG--NTVTYTTLIHGFFQARECDNAQIV 453
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
F M +DG P I TY +L+ L + +V+ A +F Q
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 9/219 (4%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
FP L+ K + L +M G + Y+ +++C C +
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQL----- 132
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
S A VL +M G ++ T N L+ C + DA+ L +M E G P+ TF
Sbjct: 133 --SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
LI L++ R E ++DRM G D Y + LC ++ AL + M+
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVK--GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
EPG+ Y+ ++ L + V+ A LF E ++G+
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ PD +L+ G C +GK+E A + + R E + YN M++ +C+ + +D +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+ + +GV NV T+ +++ C+ E+A LF M E G P+ T+
Sbjct: 522 -------DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 161 VVLIRSLYQAARLEEGD-----EMIDRMKSAGF 188
LIR A L +GD E+I M+S F
Sbjct: 575 NTLIR-----AHLRDGDKAASAELIREMRSCRF 602
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 28/179 (15%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAML--------- 87
+++ FP+ + LIKG+C +++E L EM + G V Y ++
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 88 DCVCELCRQK----------------DPFLLHSEAEKVLVEMDY---RGVPRNVETFNVL 128
D + +Q D + + E LV +Y + ++ T+N++
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
I +CK K ED LF + G PN T+ ++ + EE D + MK G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 121/234 (51%), Gaps = 9/234 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
++GL+++ S+ ++++ LC + A ++ L I P+ ++ I GWC ++EE
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A EM GF V++Y ++ C C Q+ F+ + ++L EM+ G P N
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYC----QQFEFI---KVYEMLSEMEANGSPPNSI 295
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+ ++++L ++ E+AL++ RM GC P+ + LI +L +A RLEE E + R+
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA-ERVFRV 354
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
+ G S++ Y + + C + + A+++ M++ C P + TY L+
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 11/210 (5%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G+ EEA + + G E + N +LD +C+ R + +A VL+++
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVE-------QARVVLLQLKSHIT 221
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
P N TFN+ I CK + E+AL M G P ++ +IR Q + E
Sbjct: 222 P-NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYE 280
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
M+ M++ G+ + Y ++ L + E AL+V MK GC+P Y+ L+
Sbjct: 281 MLSEMEAN--GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHT 338
Query: 239 LGAHNRVDKANALFH-EAQSRGLAVTPKEY 267
L R+++A +F E G+++ Y
Sbjct: 339 LARAGRLEEAERVFRVEMPELGVSINTSTY 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 10/213 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ ++ + EEA R+A M R G + + YN ++ + R +
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE----- 346
Query: 103 HSEAEKVL-VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG-CYPNETTF 160
EAE+V VEM GV N T+N +I C + + A++L M C P+ T+
Sbjct: 347 --EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
L+RS ++ + E +++ M + SLD+ Y + LC E A +F M
Sbjct: 405 QPLLRSCFKRGDVVEVGKLLKEMVTKHH-LSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
+ P +T LL+ ++ N + A + H
Sbjct: 464 ISQDITPRHRTCLLLLEEVKKKNMHESAERIEH 496
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 121/234 (51%), Gaps = 9/234 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
++GL+++ S+ ++++ LC + A ++ L I P+ ++ I GWC ++EE
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A EM GF V++Y ++ C C Q+ F+ + ++L EM+ G P N
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYC----QQFEFI---KVYEMLSEMEANGSPPNSI 295
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+ ++++L ++ E+AL++ RM GC P+ + LI +L +A RLEE E + R+
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA-ERVFRV 354
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
+ G S++ Y + + C + + A+++ M++ C P + TY L+
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 11/210 (5%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G+ EEA + + G E + N +LD +C+ R + +A VL+++
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVE-------QARVVLLQLKSHIT 221
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
P N TFN+ I CK + E+AL M G P ++ +IR Q + E
Sbjct: 222 P-NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYE 280
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
M+ M++ G+ + Y ++ L + E AL+V MK GC+P Y+ L+
Sbjct: 281 MLSEMEAN--GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHT 338
Query: 239 LGAHNRVDKANALFH-EAQSRGLAVTPKEY 267
L R+++A +F E G+++ Y
Sbjct: 339 LARAGRLEEAERVFRVEMPELGVSINTSTY 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 10/213 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ ++ + EEA R+A M R G + + YN ++ + R +
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE----- 346
Query: 103 HSEAEKVL-VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG-CYPNETTF 160
EAE+V VEM GV N T+N +I C + + A++L M C P+ T+
Sbjct: 347 --EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
L+RS ++ + E +++ M + SLD+ Y + LC E A +F M
Sbjct: 405 QPLLRSCFKRGDVVEVGKLLKEMVTKHH-LSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
+ P +T LL+ ++ N + A + H
Sbjct: 464 ISQDITPRHRTCLLLLEEVKKKNMHESAERIEH 496
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 10/263 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G++ D + +V+ C S A ++ + ++ + PD L+ G+C ++ +A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M G++ +VAYNA++D +C+ R D F E E+ +G+ NV T
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER-------KGIRPNVVT 227
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ L+ LC + DA +L M + PN T+ L+ + + ++ E E+ + M
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
D Y + LC +R++ A ++F +M + GC + +Y+ L++ R
Sbjct: 288 RMSIDP--DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 245 VDKANALFHEAQSRGLAVTPKEY 267
V+ LF E RGL Y
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTY 368
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 124/259 (47%), Gaps = 16/259 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G++ + + +V LC+ S A R++ D+ + I P+ L+ + +GK+ EA
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS---EAEKVLVEMDYRGVPRN 121
+ L EM R + +V Y+++++ +C LH EA ++ M +G +
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLC----------LHDRIDEANQMFDLMVSKGCLAD 329
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V ++N LI CK ++ ED +KLF M + G N T+ LI+ +QA +++ E
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
+M FG S D Y L LC +E AL +F M+ + I TY ++ +
Sbjct: 390 QMDF--FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 242 HNRVDKANALFHEAQSRGL 260
+V++A +LF +GL
Sbjct: 448 TGKVEEAWSLFCSLSLKGL 466
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R + + + LI+G+ G +++A+ +M G + YN +L +C+
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD------ 412
Query: 99 PFLLHSEAEKVLV---EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
+ E EK LV +M R + ++ T+ +I +CK K E+A LF + G P
Sbjct: 413 ----NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
+ T+ ++ L L E + + +MK G
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 12/266 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + ++ LC+ G +M+++ + R I PD LI + +GKL EA
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC-ELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
+ L EM G + YN+++D C E C LH EA ++ M +G ++
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENC-------LH-EANQMFDLMVSKGCEPDIV 386
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+++LI + CK ++ +D ++LF + G PN T+ L+ Q+ +L E+ M
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
S G S+ Y L LC + AL++F M+ GI Y++++ + +
Sbjct: 447 VSRGVPPSV--VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 244 RVDKANALFHEAQSRGLAVTPKEYAV 269
+VD A +LF +G+ Y V
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNV 530
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 123/294 (41%), Gaps = 37/294 (12%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G + D + +V C +G S A +RMV+ R PD LI G C+ G++
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR---PDLVTVSTLINGLCLKGRV 191
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQ------KDPFLLHS-- 104
EA L M GF+ V Y +L+ +C +L R+ K + +S
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 105 -----------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGC 153
+A + EM+ +G+ +V T++ LI LC K +D K+ M
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 154 YPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHA 213
P+ TF LI + +L E E+ + M + G D Y + C + A
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP--DTITYNSLIDGFCKENCLHEA 369
Query: 214 LKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
++F +M + GCEP I TY +L++ RVD LF E S+GL Y
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 10/267 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLE 62
+YG + D + V+ +LC G ++ A + + + R I ++I C DG +
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A L EM G + VV Y++++ +C + D K+L EM R + +V
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD-------GAKMLREMIGRNIIPDV 315
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
TF+ LI K K +A +L++ M G P+ T+ LI + L E ++M D
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M S G D Y + C +RV+ +++F + + G P TY+ L+
Sbjct: 376 MVSKG--CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
+++ A LF E SRG+ + Y +
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGI 460
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 8/186 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + + +V C G + A+ + +++ +R + P +L+ G C +G+L +A
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ +M + LG+ YN ++ +C + D A + + +GV +V T
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD-------AWSLFCSLSDKGVKPDVVT 527
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+NV+I LCK +A LF +M E GC P++ T+ +LIR+ + L E+I+ MK
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Query: 185 SAGFGA 190
GF A
Sbjct: 588 VCGFSA 593
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 2/157 (1%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
M+ G+ ++ T ++I C+ +K A + R + G P+ TF L+ R
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
+ E ++DRM D + LC RV AL + M G +P TY
Sbjct: 156 VSEAVALVDRM--VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 233 DLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
++++L A LF + + R + + +Y++
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 14/261 (5%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDG 59
MERD G++ D + +V LC G S A R+++D+ R I P+ +I + +G
Sbjct: 200 MERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
K EA +L EM R + V YN++++ +C R EA+++L M +G
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV-------DEAKQMLDLMVTKGCL 311
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V T+N LI CK ++ ++ KLF M + G + T+ +I+ +QA R + E+
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
RM S + + Y L LC RVE AL +F M+ E I TY++++ +
Sbjct: 372 FSRMDSRP-----NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 240 GAHNRVDKANALFHEAQSRGL 260
V+ A LF +GL
Sbjct: 427 CKIGNVEDAWDLFRSLSCKGL 447
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 10/257 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ D S +V+ LC A +V + + + PD LI G+C ++ +A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M GF VV YN ++D C++ L ++A ++ M+ GV + T
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIG-------LVNDAVELFDRMERDGVRADAVT 211
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N L+ LC + DA +L M PN TF +I + + E ++ + M
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
D Y + LC RV+ A ++ +M GC P + TY+ L++ R
Sbjct: 272 RRCVDP--DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 245 VDKANALFHEAQSRGLA 261
VD+ LF E RGL
Sbjct: 330 VDEGTKLFREMAQRGLV 346
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 26/198 (13%)
Query: 17 VVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
++ LC G A++M+ + + PD + LI G+C +++E +L EM + G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 76 FELGVVAYNAML---------DCVCELCRQKDP-------------FLLHSEAEKVLV-- 111
+ YN ++ D E+ + D ++ EK LV
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 112 -EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M + ++ T+N++I +CKI EDA LF + G P+ ++ +I +
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 171 ARLEEGDEMIDRMKSAGF 188
+ ++ D + +M+ G
Sbjct: 465 RQWDKSDLLYRKMQEDGL 482
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
M+ G+ ++ ++N++I LC+ + AL + +M ++G P+ T LI Q
Sbjct: 94 HMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGN 153
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
R+ + +++ +M+ GF D Y + C I V A+++F M+ DG T
Sbjct: 154 RVFDAIDLVSKMEEMGFRP--DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVT 211
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
Y+ L++ L R A L + R +
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ D + ++ LC+ G S A R++ D L R I P+ + LI + +GKL EA
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM + + +V YN++++ C R EA+++ M + +V T
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL-------DEAQQIFTLMVSKDCLPDVVT 382
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI CK +K D ++LF M G N T+ LI +QA+ + + +M
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G ++ Y L LC ++E A+ VF ++ EP I TY+++ + +
Sbjct: 443 SDGVHPNI--MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 245 VDKANALFHEAQSRGL 260
V+ LF +G+
Sbjct: 501 VEDGWDLFCSLSLKGV 516
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 16/268 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G + D + +V L AS A ERMV + PD +I G C G+
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMV---VKGCQPDLVTYGAVINGLCKRGEP 221
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ A L +M +G E VV Y+ ++D +C+ R D +A + EMD +G+ +
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKY-RHVD------DALNLFTEMDNKGIRPD 274
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T++ LI+ LC + DA +L M E PN TF LI + + +L E +++ D
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M ++ Y + C +R++ A ++F +M + C P + TY+ L++
Sbjct: 335 EMIQRSIDPNI--VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYAV 269
+V LF + RGL Y
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 10/243 (4%)
Query: 15 KVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
V++ LC A + ++ + I PD LI C G+ +A RL +M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
VV +N+++D K+ L+ EAEK+ EM R + N+ T+N LI C
Sbjct: 304 RKINPNVVTFNSLIDAFA-----KEGKLI--EAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ ++A ++F M C P+ T+ LI +A ++ +G E+ M G +
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG--N 414
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y + ++A VF M +DG P I TY+ L+ L + +++KA +F
Sbjct: 415 TVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 254 EAQ 256
Q
Sbjct: 475 YLQ 477
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 31/253 (12%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +++ +G AE++ + + R I P+ + LI G+C+ +L+EA+++ M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPF--------------------LLHS------- 104
VV YN +++ C+ + D L+H
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 105 -EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
A+ V +M GV N+ T+N L+ LCK K E A+ +F + + P+ T+ ++
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
+ +A ++E+G ++ + G D AY ++ C E A +F MK D
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKP--DVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 224 GCEPGIKTYDLLM 236
G P TY+ L+
Sbjct: 550 GPLPDSGTYNTLI 562
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 9/186 (4%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
G + YN M++C+C R + F L +L +M G ++ T N L+ C
Sbjct: 95 GVSHNLYTYNIMINCLCR--RSQLSFAL-----AILGKMMKLGYGPSIVTLNSLLNGFCH 147
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+ +A+ L +M E G P+ TF L+ L+Q + E +++RM G D
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK--GCQPDL 205
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
Y + LC + AL + M+ E + Y ++ L + VD A LF E
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 255 AQSRGL 260
++G+
Sbjct: 266 MDNKGI 271
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
KL+EA L GEM + +V ++ +L + ++ K L+ S EK M+ GV
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM---KKFDLVISFGEK----MEILGVS 97
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
N+ T+N++I LC+ + AL + +M + G P+ T L+ R+ E +
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+D+M G+ + F T++ G+ + A+ + M GC+P + TY ++
Sbjct: 158 VDQMVEMGY-----QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 237 SKLGAHNRVDKANALFHEAQ 256
+ L D A L ++ +
Sbjct: 213 NGLCKRGEPDLALNLLNKME 232
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P+ + L+ G C +GKLE+A + + + E + YN M + +C+ + +D +
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+ + +GV +V +N +I+ CK E+A LF +M E G P+ T+
Sbjct: 506 -------DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 161 VVLIRSLYQAARLEEGD-----EMIDRMKSAGFGA 190
LIR A L +GD E+I M+S F
Sbjct: 559 NTLIR-----AHLRDGDKAASAELIKEMRSCRFAG 588
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 10/256 (3%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+L +V LC G S A ++ + F P+E ++ C G+ A L +M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
+L V Y+ ++D +C+ + F L +E M+ +G ++ T+N LI
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE-------MEIKGFKADIITYNTLIGG 307
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
C + +D KL M + PN TF VLI S + +L E D+++ M G
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP- 366
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ Y + C R+E A+++ +M + GC+P I T+++L++ NR+D L
Sbjct: 367 -NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 252 FHEAQSRGLAVTPKEY 267
F E RG+ Y
Sbjct: 426 FREMSLRGVIANTVTY 441
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 31/269 (11%)
Query: 17 VVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
V+ +C G + A +++ + R I D ++I G C DG L+ A L EM G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 76 FELGVVAYNAMLDCVCELCRQKD--------------------PFLLHS--------EAE 107
F+ ++ YN ++ C R D L+ S EA+
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
++L EM RG+ N T+N LI CK + E+A+++ M GC P+ TF +LI
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 168 YQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEP 227
+A R+++G E+ M G A + Y + C ++E A K+F M + P
Sbjct: 414 CKANRIDDGLELFREMSLRGVIA--NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
I +Y +L+ L + ++KA +F + +
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIE 500
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 121/258 (46%), Gaps = 10/258 (3%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ V+++ +G A++++K++ R I P+ + LI G+C + +LEEA ++ M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G + ++ +N +++ C+ R D L E M RGV N T+N L+
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFRE-------MSLRGVIANTVTYNTLVQG 447
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
C+ K E A KLF M P+ ++ +L+ L LE+ E+ +++ +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM--E 505
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
LD Y + +C +V+ A +F + G + + Y++++S+L + + KA+ L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 252 FHEAQSRGLAVTPKEYAV 269
F + G A Y +
Sbjct: 566 FRKMTEEGHAPDELTYNI 583
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 8/188 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + + +V+ C G A+++ +++ +R + PD +L+ G C +G+LE+A
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ G++ + EL + Y ++ +C + D A + + +GV +
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD-------AWDLFCSLPLKGVKLDARA 545
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I+ LC+ A LF +M E G P+E T+ +LIR+ E+I+ MK
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 185 SAGFGASL 192
S+GF A +
Sbjct: 606 SSGFPADV 613
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
++I +C KL A G++ + G+E V +N +L+ +C CR SEA ++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV-------SEALEL 180
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
+ M G + T N L+ LC K DA+ L RM E G PNE T+ ++ + +
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
+ + E++ +M+ LD Y + LC +++A +F M+ G + I
Sbjct: 241 SGQTALAMELLRKMEERNI--KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 230 KTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY+ L+ R D L + R ++ ++V
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M+ +G+ ++ T +++I C+ RK A ++ + G P+ F L+ L
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
R+ E E++DRM G +L + LC +V A+ + M G +P T
Sbjct: 173 RVSEALELVDRMVEMGHKPTL--ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVT 230
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
Y +++ + + A L + + R + + +Y++
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 11/261 (4%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDG 59
ME+D G+ D + ++ LCS G S A RMV + R I+PD + LI +G
Sbjct: 212 MEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 270
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
++ EA EM R + +V Y+ ++ +C R EAE++ M +G
Sbjct: 271 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL-------DEAEEMFGFMVSKGCF 323
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V T+++LI CK +K E +KLF M + G N T+ +LI+ +A +L +E+
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
RM G ++ Y L LC ++E AL + A M+ +G + I TY++++ +
Sbjct: 384 FRRMVFCGVHPNI--ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 240 GAHNRVDKANALFHEAQSRGL 260
V A ++ +GL
Sbjct: 442 CKAGEVADAWDIYCSLNCQGL 462
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 9/219 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
L+ G+C ++ +A + +M G++ VV YN ++D +C+ +Q D A +L
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK-SKQVD------NALDLL 209
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M+ G+ +V T+N LI+ LC + DA ++ M + YP+ TF LI + +
Sbjct: 210 NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R+ E +E + M D Y + LC R++ A ++F M + GC P +
Sbjct: 270 GRVSEAEEFYEEMIRRSLDP--DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY +L++ +V+ LF E RG+ Y +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 30/258 (11%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP--- 99
P+ + + +I G C +++ A L M + G VV YN+++ +C R D
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 100 -------------FLLH------------SEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
F + SEAE+ EM R + ++ T+++LI LC
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+ ++A ++F M GC+P+ T+ +LI ++ ++E G ++ M G +
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR--GVVRNT 361
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
Y + C ++ A ++F M G P I TY++L+ L + +++KA + +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 255 AQSRGLAVTPKEYAVDPR 272
Q G+ Y + R
Sbjct: 422 MQKNGMDADIVTYNIIIR 439
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M G+P N+ T N+L+ C+ + AL +M + G P+ TF L+ +
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD 165
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
R+ + M D+M G G + Y + LC ++V++AL + M+ DG P + T
Sbjct: 166 RVYDALYMFDQM--VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 232 YDLLMSKLGAHNRVDKAN 249
Y+ L+S L + R A
Sbjct: 224 YNSLISGLCSSGRWSDAT 241
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
+LI+G+C GKL A + M G ++ YN +L +C+ + + EK
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD----------NGKIEKA 415
Query: 110 LV---EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
LV +M G+ ++ T+N++I +CK + DA ++ + G P+ T+ ++
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 167 LYQAARLEEGDEMIDRMKSAGF 188
LY+ E D + +MK G
Sbjct: 476 LYKKGLRREADALFRKMKEDGI 497
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 15/260 (5%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLE 62
+YG++ D +V LC+ G A+ +++ + R I PD + LI + +GK
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVC-ELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+A L EM R + Y ++++ C E C EA ++ M+ +G +
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD--------EARQMFYLMETKGCFPD 316
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V + LI CK +K +DA+K+F+ M + G N T+ LI+ Q + E+
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK---ADGCEPGIKTYDLLMSK 238
M S G ++ + Y L LC +V+ AL +F M+ DG P I TY++L+
Sbjct: 377 HMVSRGVPPNI--RTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 239 LGAHNRVDKANALFHEAQSR 258
L + +++KA +F + + R
Sbjct: 435 LCYNGKLEKALMVFEDMRKR 454
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 31/293 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +++ C A + + ++ F PD LI G+C+ ++EEA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE---------LCRQKDPF--------------- 100
+ +M G + VV Y ++D +C+ L Q + +
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 101 LLHS----EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
L +S +A+ +L M R + +V TFN LI K K DA +L++ M PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ LI ++E +M M++ G D AY + C ++V+ A+K+
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETK--GCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
F M G TY L+ G + + A +F SRG+ + Y V
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%), Gaps = 9/265 (3%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEAR 65
+K D + +++ +G AE + ++ R+ I P+ LI G+C++G ++EAR
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
++ M G VVAY ++++ C+ C++ D +A K+ EM +G+ N T+
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCK-CKKVD------DAMKIFYEMSQKGLTGNTITY 355
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
LI ++ K A ++F M G PN T+ VL+ L ++++ + + M+
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 186 AGF-GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G + + Y L LC ++E AL VF M+ + GI TY +++ + +
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V A LF S+G+ Y
Sbjct: 476 VKNAVNLFCSLPSKGVKPNVVTYTT 500
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 39/172 (22%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LI+G+ GK A+ + M G + YN +L C+C + K ++ + +K
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR- 416
Query: 111 VEMDYRGVPRNVETFNVLI-----------------------------------TNLCKI 135
EMD GV N+ T+NVL+ +CK
Sbjct: 417 -EMD--GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
K ++A+ LF + G PN T+ +I L++ E + +MK G
Sbjct: 474 GKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 20/257 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+KRD ++++ LC A ++K + R I P+ LI G C G+L +A
Sbjct: 43 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 102
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R EM V+ ++A++D + R K S+ + V M + NV T
Sbjct: 103 ERRLHEMDSKKINPNVITFSALIDAYAK--RGK-----LSKVDSVYKMMIQMSIDPNVFT 155
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ LI LC + ++A+K+ M GC PN T+ L ++++R+++G +++D M
Sbjct: 156 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 215
Query: 185 SAGFGASLDK-----KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
G A+ K Y+Q +++ AL VF M ++G P I++Y+++++ L
Sbjct: 216 QRGVAANTVSCNTLIKGYFQ-------AGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 268
Query: 240 GAHNRVDKANALFHEAQ 256
A+ V+KA + F Q
Sbjct: 269 FANGEVEKALSRFEHMQ 285
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 13/231 (5%)
Query: 33 MVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCE 92
M+K + I PD L+ G+C+ +++A +AG+M + G + VV ++D
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT--- 57
Query: 93 LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG 152
LC+ + L A +VL M RG+ NV T++ LIT LCK + DA + H M
Sbjct: 58 LCKNR----LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK 113
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK--AYYQFLTILCGIERV 210
PN TF LI + + +L + D + M S+D Y + LC RV
Sbjct: 114 INPNVITFSALIDAYAKRGKLSKVDSVYKMM----IQMSIDPNVFTYSSLIYGLCMHNRV 169
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+ A+K+ +M + GC P + TY L + +RVD L + RG+A
Sbjct: 170 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVA 220
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 11/230 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P+ LI G C+ +++EA ++ M G VV Y+ + + + R D
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 208
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
K+L +M RGV N + N LI + K + AL +F M G PN ++
Sbjct: 209 -------KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSY 261
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+++ L+ +E+ + M+ LD Y + +C V+ A +F +
Sbjct: 262 NIVLAGLFANGEVEKALSRFEHMQKTR--NDLDIITYTIMIHGMCKACMVKEAYDLFYKL 319
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANAL--FHEAQSRGLAVTPKEYA 268
K EP K Y +++++L +A+AL F++ R P E +
Sbjct: 320 KFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVRQNESAPAEVS 369
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 10/259 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKL 61
RD G D + V+V +C +G A + + D+ + P+ +++++ C G+
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+A +L +M R GF VV +N +++ LCR+ L A +L +M G N
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINF---LCRKG----LLGRAIDILEKMPQHGCQPN 378
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
++N L+ CK +K + A++ RM GCYP+ T+ ++ +L + ++E+ E+++
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
++ S G L Y + L + A+K+ M+A +P TY L+ L
Sbjct: 439 QLSSKGCSPVL--ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 242 HNRVDKANALFHEAQSRGL 260
+VD+A FHE + G+
Sbjct: 497 EGKVDEAIKFFHEFERMGI 515
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 11/245 (4%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
V++ C G + A ++ ++ + PD + +++ C GKL++A + M +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
V+ Y +++ C +D + H A K+L EM RG +V T+NVL+ +CK
Sbjct: 234 DCYPDVITYTILIEATC-----RDSGVGH--AMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+ ++A+K + M GC PN T +++RS+ R + ++++ M GF S+
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV-- 344
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+ + LC + A+ + M GC+P +Y+ L+ ++D+A
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 255 AQSRG 259
SRG
Sbjct: 405 MVSRG 409
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD C LI+G+C GK +A ++ + G V+ YN M+ C+
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK---------- 184
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
E L +D V +V T+N ++ +LC K + A+++ RM + CYP+ T+ +
Sbjct: 185 AGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + + + + +++D M+ G + D Y + +C R++ A+K M +
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
GC+P + T+++++ + + R A L + +G +
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 31/188 (16%)
Query: 29 YAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
Y ERMV +R +PD + ++ C DGK+E+A + ++ G ++ YN ++D
Sbjct: 401 YLERMV---SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 89 CVCELCR----------------QKDPFLLHS------------EAEKVLVEMDYRGVPR 120
+ + + + D S EA K E + G+
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
N TFN ++ LCK R+T+ A+ M GC PNET++ +LI L +E E++
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 181 DRMKSAGF 188
+ + + G
Sbjct: 578 NELCNKGL 585
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
E K L M Y G ++ LI C++ KT A K+ + G P+ T+ V+I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
+A + ++DRM S D Y L LC +++ A++V M
Sbjct: 180 SGYCKAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
C P + TY +L+ + V A L E + RG Y V
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 120/258 (46%), Gaps = 10/258 (3%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
YGL+ D +++ LC G A ++ +D+ P+ L+ GWC +GKL EA
Sbjct: 196 YGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEA 255
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + +M G E +V + +L + D + L ++ K RG NV
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRK-------RGFEPNVNC 308
Query: 125 FNVLITNLCKIRKTED-ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+ VLI LC+ K D A+++F M +GC + T+ LI + +++G ++D M
Sbjct: 309 YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM 368
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+ G S + Y Q + E+ E L++ MK GC P + Y++++
Sbjct: 369 RKKGVMPS--QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 426
Query: 244 RVDKANALFHEAQSRGLA 261
V +A L++E ++ GL+
Sbjct: 427 EVKEAVRLWNEMEANGLS 444
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 13/238 (5%)
Query: 31 ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV 90
E M K +I P+ + +L++ + +++A + EM + G E + +LD +
Sbjct: 155 EEMRKTNPELIEPE--LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDAL 212
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
C+ K EA KV +M + P N+ F L+ C+ K +A ++ +M E
Sbjct: 213 CKNGSVK-------EASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 264
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE-R 209
G P+ F L+ A ++ + ++++ M+ GF +++ Y + LC E R
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVN--CYTVLIQALCRTEKR 322
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
++ A++VF M+ GCE I TY L+S +DK ++ + + +G+ + Y
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTY 380
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 122/298 (40%), Gaps = 32/298 (10%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWC-VDGK 60
++ GL+ D ++ G + A ++ D+ + F C +LI+ C + +
Sbjct: 263 KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKR 322
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCEL------------CRQK----------D 98
++EA R+ EM R G E +V Y A++ C+ R+K
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 99 PFLLHSEAEK------VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG 152
+ H + E+ ++ +M RG ++ +NV+I CK+ + ++A++L++ M G
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
P TFV++I L E M S G ++ L L +++E
Sbjct: 443 LSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEM 502
Query: 213 ALKVFAMM--KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
A V++ + K CE + + + + L A V +A + + L P YA
Sbjct: 503 AKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYA 560
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 27/279 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + + +++ CS G S A+R+++D+ R I PD + LI +GKL EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP---FLLHS----------------- 104
+L EM V YN+M+ C+ R D F L +
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRA 445
Query: 105 ----EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
E ++L E+ RG+ N T+N LI C++ A LF M G P+ T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+L+ + +LEE E+ + ++ + LD AY + +C +V+ A +F +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKI--DLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
G EP ++TY++++S + + AN LFH+ + G
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 8/186 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + + ++ C + A+ + ++ ++ + PD C++L+ G+C + KLEEA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L + +L VAYN ++ +C+ + EA + + GV +V+T
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV-------DEAWDLFCSLPIHGVEPDVQT 574
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+NV+I+ C DA LFH+M + G P+ +T+ LIR +A +++ E+I M+
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Query: 185 SAGFGA 190
S GF
Sbjct: 635 SNGFSG 640
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 14/256 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + +V +C G A ++ + I PD + +I C DG +A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ L EM G V YN M+D C R D A+++L +M R + +V T
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD-------AQRLLRDMIEREINPDVLT 368
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI+ K K +A KL M +P+ T+ +I + R ++ M D M
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM- 427
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
AS D + + + C +RV+ +++ + G TY+ L+ +
Sbjct: 428 -----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 245 VDKANALFHEAQSRGL 260
++ A LF E S G+
Sbjct: 483 LNAAQDLFQEMISHGV 498
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 34/247 (13%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL------ 102
+ LI G C++G++ EA L +M G + VV Y +++ +C++ K L
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 103 ----------------------HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
HS+A+ + EM +G+ NV T+N +I C + D
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
A +L M E P+ TF LI + + +L E +++ D M D Y
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP--DTVTYNSM 407
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ C R + A +F +M + P + T++ ++ RVD+ L E RGL
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 261 AVTPKEY 267
Y
Sbjct: 464 VANTTTY 470
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 25/262 (9%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
S ++++ C S++ L ++ F PD + L+ G C++ ++ EA L G M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 72 YRGGF-----------ELG----VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYR 116
GF E+G V+ +N +++ +C R EA ++ +M +
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL-------EAAALVNKMVGK 255
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G+ +V T+ ++ +CK+ T+ AL L +M E P+ + +I L + +
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ M G ++ Y + C R A ++ M P + T++ L+
Sbjct: 316 QYLFSEMLEKGIAPNV--FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 237 SKLGAHNRVDKANALFHEAQSR 258
S ++ +A L E R
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHR 395
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 22/158 (13%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M+ R +P N+ +FN+LI C K +L F ++ + G P+ TF L+ L
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
R+ E + M GF A+ +F M G P + T
Sbjct: 191 RISEALALFGYMVETGF----------------------LEAVALFDQMVEIGLTPVVIT 228
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
++ L++ L RV +A AL ++ +GL + Y
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 27/279 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + + +++ CS G S A+R+++D+ R I PD + LI +GKL EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP---FLLHS----------------- 104
+L EM V YN+M+ C+ R D F L +
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRA 445
Query: 105 ----EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
E ++L E+ RG+ N T+N LI C++ A LF M G P+ T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+L+ + +LEE E+ + ++ + LD AY + +C +V+ A +F +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKI--DLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
G EP ++TY++++S + + AN LFH+ + G
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 8/186 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + + ++ C + A+ + ++ ++ + PD C++L+ G+C + KLEEA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L + +L VAYN ++ +C+ + EA + + GV +V+T
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV-------DEAWDLFCSLPIHGVEPDVQT 574
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+NV+I+ C DA LFH+M + G P+ +T+ LIR +A +++ E+I M+
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Query: 185 SAGFGA 190
S GF
Sbjct: 635 SNGFSG 640
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 14/256 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + +V +C G A ++ + I PD + +I C DG +A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ L EM G V YN M+D C R D A+++L +M R + +V T
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD-------AQRLLRDMIEREINPDVLT 368
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI+ K K +A KL M +P+ T+ +I + R ++ M D M
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM- 427
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
AS D + + + C +RV+ +++ + G TY+ L+ +
Sbjct: 428 -----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 245 VDKANALFHEAQSRGL 260
++ A LF E S G+
Sbjct: 483 LNAAQDLFQEMISHGV 498
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 34/247 (13%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL------ 102
+ LI G C++G++ EA L +M G + VV Y +++ +C++ K L
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 103 ----------------------HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
HS+A+ + EM +G+ NV T+N +I C + D
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
A +L M E P+ TF LI + + +L E +++ D M D Y
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP--DTVTYNSM 407
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ C R + A +F +M + P + T++ ++ RVD+ L E RGL
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 261 AVTPKEY 267
Y
Sbjct: 464 VANTTTY 470
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 100/241 (41%), Gaps = 25/241 (10%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
S ++++ C S++ L ++ F PD + L+ G C++ ++ EA L G M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 72 YRGGF-----------ELG----VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYR 116
GF E+G V+ +N +++ +C R EA ++ +M +
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL-------EAAALVNKMVGK 255
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G+ +V T+ ++ +CK+ T+ AL L +M E P+ + +I L + +
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ M G ++ Y + C R A ++ M P + T++ L+
Sbjct: 316 QYLFSEMLEKGIAPNV--FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 237 S 237
S
Sbjct: 374 S 374
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 22/158 (13%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M+ R +P N+ +FN+LI C K +L F ++ + G P+ TF L+ L
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
R+ E + M GF A+ +F M G P + T
Sbjct: 191 RISEALALFGYMVETGF----------------------LEAVALFDQMVEIGLTPVVIT 228
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
++ L++ L RV +A AL ++ +GL + Y
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 31/291 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G + + + ++ LC +G S A +V + + PD + L+ G C+ GK EA
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKDPFLLHSEAEKVLV---- 111
L +M G + V Y +L+ +C EL R+ + + +A K +
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 112 ---------------EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
EM+ +G+ N+ T+N+LI C + +D KL M + PN
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
TF VLI S + +L E +E+ M G D Y + C ++ A ++
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP--DTITYTSLIDGFCKENHLDKANQM 390
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+M + GC+P I+T+++L++ NR+D LF + RG+ Y
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + + +++ C+ G ++++D+ R I P+ +LI + +GKL EA
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM G + Y +++D C K+ L +A +++ M +G N+ T
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFC-----KENHL--DKANQMVDLMVSKGCDPNIRT 405
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN+LI CK + +D L+LF +M G + T+ LI+ + +L E+ M
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S ++ Y L LC E AL++F ++ E I Y++++ + ++
Sbjct: 466 SRKVPPNI--VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
VD A LF +G+ K Y +
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNI 548
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 10/258 (3%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ V+++ +G AE + K++ R I PD LI G+C + L++A ++ M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G + + +N +++ C+ R D ++ +M RGV + T+N LI
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGL-------ELFRKMSLRGVVADTVTYNTLIQG 447
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
C++ K A +LF M PN T+ +L+ L E+ E+ ++++ +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM--E 505
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
LD Y + +C +V+ A +F + G +PG+KTY++++ L + +A L
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 252 FHEAQSRGLAVTPKEYAV 269
F + + G A Y +
Sbjct: 566 FRKMEEDGHAPDGWTYNI 583
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 123/295 (41%), Gaps = 31/295 (10%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLE 62
+YG + + + V+ +C G + A +++ + R I D ++I G C G L+
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD--------------------PFLL 102
A L EM G ++ YN ++ C R D L+
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 103 HS--------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCY 154
S EAE++ EM +RG+ + T+ LI CK + A ++ M GC
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 155 PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHAL 214
PN TF +LI +A R+++G E+ +M G A D Y + C + ++ A
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA--DTVTYNTLIQGFCELGKLNVAK 458
Query: 215 KVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
++F M + P I TY +L+ L + +KA +F + + + + Y +
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 117/258 (45%), Gaps = 10/258 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +++ C + A +MV + ++ P+ ++LI G+C ++++
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M G V YN ++ CEL + + A+++ EM R VP N+ T
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKL-------NVAKELFQEMVSRKVPPNIVT 475
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +L+ LC ++E AL++F ++ + + + ++I + A+++++ ++ +
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G + K Y + LC + A +F M+ DG P TY++L+
Sbjct: 536 LKGVKPGV--KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 593
Query: 245 VDKANALFHEAQSRGLAV 262
K+ L E + G +V
Sbjct: 594 ATKSVKLIEELKRCGFSV 611
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 105/248 (42%), Gaps = 21/248 (8%)
Query: 22 CSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVV 81
C +GF+++++R + R ++ VD K ++A L +M V+
Sbjct: 42 CERGFSAFSDRNLSYRER------------LRSGLVDIKADDAIDLFRDMIHSRPLPTVI 89
Query: 82 AYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDA 141
++ + + + +Q D L + +M+ +G+ N+ T +++I C+ RK A
Sbjct: 90 DFSRLFSAIAK-TKQYDLVL------ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLA 142
Query: 142 LKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
++ + G PN TF LI L R+ E E++DRM G L +
Sbjct: 143 FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL--ITINTLV 200
Query: 202 TILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
LC + A+ + M GC+P TY +++ + + A L + + R +
Sbjct: 201 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 262 VTPKEYAV 269
+ +Y++
Sbjct: 261 LDAVKYSI 268
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G K D + ++ L AS A +V + R PD ++ G C G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M +G E VV YN ++D +C+ D A + EMD +G+ +V T
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD-------ALNLFTEMDNKGIRPDVFT 295
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ LI+ LC + DA +L M E PN TF LI + + +L E +++ D M
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
D Y + C +R++ A +F +M + C P + TY L+ R
Sbjct: 356 KRSIDP--DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V++ LF E RGL Y
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTT 438
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 31/280 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + VV LC +G A ++K + + I D + + +I G C +++A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-------------------- 104
L EM G V Y++++ C+C R D L S
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
EAEK+ EM R + ++ T++ LI C + ++A +F M C+PN
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ LI+ +A R+EEG E+ M G + Y + ++A V
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG--NTVTYTTLIHGFFQARDCDNAQMV 455
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
F M + G P I TY++L+ L + ++ KA +F Q
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 30 AERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
A+ + K + V + P+ ++L+ G C +GKL +A + + R E + YN M++
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+C+ + +D + ++ + +GV NV +N +I+ C+ E+A L +M
Sbjct: 512 GMCKAGKVEDGW-------ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGD-----EMIDRMKSAGFGA 190
E G PN T+ LIR ARL +GD E+I M+S GF
Sbjct: 565 KEDGPLPNSGTYNTLIR-----ARLRDGDREASAELIKEMRSCGFAG 606
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 11/226 (4%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQ 96
+++ FP+ LIKG+C ++EE L EM + G V Y ++ + R
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ-ARD 448
Query: 97 KDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
D A+ V +M GV N+ T+N+L+ LCK K A+ +F + P+
Sbjct: 449 CD------NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ ++I + +A ++E+G E+ + G S + AY ++ C E A +
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLK--GVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 217 FAMMKADGCEPGIKTYDLLM-SKLGAHNRVDKANALFHEAQSRGLA 261
MK DG P TY+ L+ ++L +R + + L E +S G A
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDR-EASAELIKEMRSCGFA 605
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 9/219 (4%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
FP + L+ K E L +M G + Y+ ++C C +
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL----- 134
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
S A VL +M G ++ T + L+ C ++ DA+ L +M E G P+ TF
Sbjct: 135 --SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
LI L+ + E ++D+M G D Y + LC ++ AL + M+
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQR--GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
E + Y+ ++ L + +D A LF E ++G+
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 104/237 (43%), Gaps = 12/237 (5%)
Query: 31 ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV 90
+RMV AR PD ++ G C G ++ A L +M +G E VV Y ++D +
Sbjct: 209 DRMV---ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
C D A + EMD +G+ NV T+N LI LC + DA +L M E
Sbjct: 266 CNYKNVND-------ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV 210
PN TF LI + + +L E +++ D M D Y + C +R+
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP--DIFTYSSLINGFCMHDRL 376
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+ A +F +M + C P + TY+ L+ RV++ LF E RGL Y
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ + + ++ LC+ G S A R++ D+ R I P+ LI + +GKL EA
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM + + + Y+++++ C R EA+ + M + NV T
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-------DEAKHMFELMISKDCFPNVVT 397
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI CK ++ E+ ++LF M + G N T+ LI+ L+QA + ++ +M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G D Y L LC ++E AL VF ++ EP I TY++++ + +
Sbjct: 458 SDGVPP--DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 245 VDKANALFHEAQSRGL 260
V+ LF +G+
Sbjct: 516 VEDGWDLFCSLSLKGV 531
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 117/280 (41%), Gaps = 31/280 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + VV LC +G A ++K + + I D + +I C + +A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-------------------- 104
L EM G VV YN+++ C+C R D L S
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
EAEK+ EM R + ++ T++ LI C + ++A +F M C+PN
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ LI+ +A R+EEG E+ M G + Y + L + A K+
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG--NTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
F M +DG P I TY +L+ L + +++KA +F Q
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV-----CELCRQ 96
FP+ + LIKG+C ++EE L EM + G V YN ++ + C++
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM--- 448
Query: 97 KDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
A+K+ +M GVP ++ T+++L+ LCK K E AL +F + + P+
Sbjct: 449 ---------AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ ++I + +A ++E+G ++ + G ++ Y ++ C E A +
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV--IIYTTMISGFCRKGLKEEADAL 557
Query: 217 FAMMKADGCEPGIKTYDLLM 236
F MK DG P TY+ L+
Sbjct: 558 FREMKEDGTLPNSGTYNTLI 577
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 9/210 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
++LI +C +L A + G+M + G+E +V +++L+ C R SEA
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI-------SEAVA 171
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
++ +M N TFN LI L K +A+ L RM GC P+ T+ ++ L
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ ++ ++ +M+ A D Y + LC + V AL +F M G P
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEA--DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ TY+ L+ L + R A+ L + R
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + + +++ L G A+++ K + + + PD +L+ G C GKLE+A
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + + E + YN M++ +C+ + +D + + + +GV NV
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW-------DLFCSLSLKGVKPNVII 537
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD-----EM 179
+ +I+ C+ E+A LF M E G PN T+ LIR ARL +GD E+
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR-----ARLRDGDKAASAEL 592
Query: 180 IDRMKSAGF 188
I M+S GF
Sbjct: 593 IKEMRSCGF 601
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 9/179 (5%)
Query: 82 AYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDA 141
+YN +++C C R + P L VL +M G ++ T + L+ C ++ +A
Sbjct: 117 SYNILINCFCR--RSQLPLAL-----AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 142 LKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
+ L +M PN TF LI L+ + E +IDRM G D Y +
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM--VARGCQPDLFTYGTVV 227
Query: 202 TILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
LC ++ AL + M+ E + Y ++ L + V+ A LF E ++G+
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 10/257 (3%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEE 63
YG+ D S +++ C S+A ++ + ++ + P L+ G+C+ ++ +
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A L M + G+E VV YN ++D LC+ + + A ++L EM+ +G+ +V
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLID---GLCKNGELNI----ALELLNEMEKKGLGADVV 212
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+N L+T LC + DA ++ M + P+ TF LI + L+E E+ M
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+ + Y + LC R+ A K F +M + GC P + TY+ L+S
Sbjct: 273 IQSSVDP--NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 244 RVDKANALFHEAQSRGL 260
VD+ LF G
Sbjct: 331 MVDEGMKLFQRMSCEGF 347
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 10/241 (4%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
+++ LC G + A ++ ++ + + D + L+ G C G+ +A R+ +M +
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
VV + A++D +Q + EA+++ EM V N T+N +I LC
Sbjct: 240 RSINPDVVTFTALIDV---FVKQGNL----DEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ DA K F M GC+PN T+ LI + ++EG ++ RM GF A D
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA--D 350
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y + C + ++ AL +F M + P I T+ +L+ L + ++ A F
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410
Query: 254 E 254
+
Sbjct: 411 D 411
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + ++ LC G S A RM++D+ R I PD LI + G L+EA
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ L EM + + V YN++++ +C R D A+K M +G NV T
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD-------AKKTFDLMASKGCFPNVVT 318
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWG----------------------------CY-- 154
+N LI+ CK R ++ +KLF RM G C+
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 155 -----PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER 209
P+ T +L+ L +E D M+ + + AY + LC ++
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE--KYIGIVAYNIMIHGLCKADK 436
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
VE A ++F + +G +P +TY +++ L + +A+ L + G+
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 11/185 (5%)
Query: 70 EMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLI 129
E+Y G + ++ ++ C C R S A VL +M G ++ TF L+
Sbjct: 98 ELY--GISHDLYSFTILIHCFCRCSRL-------SFALSVLGKMMKLGYEPSIVTFGSLL 148
Query: 130 TNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFG 189
C + + DA L M + G PN + LI L + L E+++ M+ G G
Sbjct: 149 HGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG 208
Query: 190 ASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
A D Y LT LC R A ++ M P + T+ L+ +D+A
Sbjct: 209 A--DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266
Query: 250 ALFHE 254
L+ E
Sbjct: 267 ELYKE 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 6/171 (3%)
Query: 101 LLHS----EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
LHS +A + EM + ++ F L+T +R+ E + +M +G +
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
+F +LI + +RL ++ +M G+ S+ + L C + R+ A +
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSI--VTFGSLLHGFCLVNRIGDAFSL 163
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+M G EP + Y+ L+ L + ++ A L +E + +GL Y
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 19/238 (7%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
DYG D+ + +V+ L K AS A+ L PD + L++GWC G++ E
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A ++ EM G E V Y+ ++D +C C Q S A V +M G N
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCR-CGQI------SRAHDVFADMLDSGCAPNAI 326
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TFN L+ K +TE L+++++M + GC P+ T+ LI + + LE ++++ M
Sbjct: 327 TFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM 386
Query: 184 --KSAGFGASLDKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLM 236
K AS F TI IE+ V A ++++ M CEP TY++LM
Sbjct: 387 IKKKCEVNAS-------TFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 15/263 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ + + +V++ LC G S A + D L P+ + L++ G+ E+
Sbjct: 285 GIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKV 344
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ +M + G E + YN +++ C +D L A KVL M + N T
Sbjct: 345 LQVYNQMKKLGCEPDTITYNFLIEAHC-----RDENL--ENAVKVLNTMIKKKCEVNAST 397
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN + + K R A +++ +M E C PN T+ +L+R + + +M+ +MK
Sbjct: 398 FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGS----KSTDMVLKMK 453
Query: 185 SAGFGASLDK--KAYYQFLTILCGIERVEHALKVFAMMKADGC-EPGIKTYDLLMSKLGA 241
++ Y +T+ CG+ +A K+F M + C P + Y++++++L
Sbjct: 454 KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513
Query: 242 HNRVDKANALFHEAQSRGLAVTP 264
++ K L + +GL P
Sbjct: 514 AGQLKKHEELVEKMIQKGLVARP 536
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 83 YNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDAL 142
YN M+D ++ RQ D A ++ M R V ++ETF +LI + +A+
Sbjct: 154 YNEMIDLSGKV-RQFD------LAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAV 206
Query: 143 KLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLT 202
F+RM ++GC P++ F ++I +L + R E D +K D Y +
Sbjct: 207 HCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR---FEPDVIVYTNLVR 263
Query: 203 ILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
C + A KVF MK G EP + TY +++ L ++ +A+ +F + G A
Sbjct: 264 GWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCA 322
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Query: 102 LHSEAEKVLVEM-DYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L SEA M DY VP + F+++I+NL + R+ +A F + + P+ +
Sbjct: 201 LASEAVHCFNRMEDYGCVPDKI-AFSIVISNLSRKRRASEAQSFFDSLKD-RFEPDVIVY 258
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
L+R +A + E +++ MK AG ++ Y + LC ++ A VFA M
Sbjct: 259 TNLVRGWCRAGEISEAEKVFKEMKLAGIEPNV--YTYSIVIDALCRCGQISRAHDVFADM 316
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
GC P T++ LM R +K ++++ + G
Sbjct: 317 LDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 3 RDYGLKRDRGSLKVVVEKLC-SKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGK 60
R+ GL SL V+++ LC + G ++ ++ R PD LI G C G+
Sbjct: 148 REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGR 207
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
++EA++L EM VV Y ++++ LC K+ EA + L EM +G+
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLIN---GLCGSKNV----DEAMRYLEEMKSKGIEP 260
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
NV T++ L+ LCK ++ A++LF M GC PN T+ LI L + +++E E++
Sbjct: 261 NVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELL 320
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG-------IKTYD 233
DRM G D Y + ++ C I + A M G P +KT +
Sbjct: 321 DRMNLQGLKP--DAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSN 378
Query: 234 LLMSKLGAHNRVDKANALFHEAQSRGLAV 262
++ L A N +A L+ +SRG++V
Sbjct: 379 EVVRGLCA-NYPSRAFTLYLSMRSRGISV 406
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 103/271 (38%), Gaps = 47/271 (17%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D + ++ LC G A+++ ++ + P LI G C ++EA
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R EM G E V Y++++D +C+ R +A ++ M RG N+ T
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSL-------QAMELFEMMMARGCRPNMVT 299
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ LIT LCK +K ++A++L RM G P+ + +I ++ E +D M
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 185 SAGF---------------------------------------GASLDKKAYYQFLTILC 205
G G S++ + + LC
Sbjct: 360 LGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 206 GIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ A+++ + DGC P T+ LL+
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
++ + D+L++FH+M ++ C P++ +V ++ L + +L + M+ G ++
Sbjct: 98 RVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTV- 156
Query: 194 KKAYYQFLTILCGIE-RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
+ + LC + V+ LK+F M GC+P TY L+S L R+D+A LF
Sbjct: 157 -ASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLF 215
Query: 253 HEAQSRGLAVTPKEYA 268
E + A T Y
Sbjct: 216 TEMVEKDCAPTVVTYT 231
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 11/264 (4%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMV--KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
+K D +++ LC G AE ++ L P+ + LI G+C GKLE A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + M + VV N + V +CR + A ++M+ GV NV T
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTI---VGGMCRHHGLNM----AVVFFMDMEKEGVKGNVVT 478
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ LI C + E A+ + +M E GC P+ + LI L Q R + +++++K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
GF SLD AY + + C E ++ M+ +G +P TY+ L+S G H
Sbjct: 539 EGGF--SLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 245 VDKANALFHEAQSRGLAVTPKEYA 268
+ + + + GL T Y
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYG 620
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 106/232 (45%), Gaps = 26/232 (11%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P+ I C + + A + ++ + L +NA+L C L R D
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC---LGRNMDI- 310
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM----GEWG--CY 154
S ++++MD + +V T +LI LCK R+ ++AL++F +M + G
Sbjct: 311 ---SRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIK 367
Query: 155 PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE------ 208
+ F LI L + RL+E +E++ RMK L+++ +T C I+
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMK-------LEERCVPNAVTYNCLIDGYCRAG 420
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
++E A +V + MK D +P + T + ++ + H+ ++ A F + + G+
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + LI G C + +A R+ ++ GGF L ++AYN ++ C+
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD---------- 558
Query: 103 HSEAEKV---LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
+ AEKV L +M+ G + T+N LI+ K + E ++ +M E G P TT
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKA--YYQFLTILCGIERVEHALKVF 217
+ +I + L DE + K G + ++ Y + + AL +
Sbjct: 619 YGAVIDAYCSVGEL---DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 218 AMMKADGCEPGIKTYDLL 235
MK P ++TY+ L
Sbjct: 676 EEMKMKMVRPNVETYNAL 693
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 51 LIKGWCVDGKLEEARRLAGEM-YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
+I +C G+L+EA +L +M V YN +++ +L +A +
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN-------FGQALSL 674
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
EM + V NVET+N L L + + E LKL M E C PN+ T +L+
Sbjct: 675 KEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME---- 730
Query: 170 AARLEEGDEMI 180
RL DE++
Sbjct: 731 --RLSGSDELV 739
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 12/266 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G K D + ++ L AS A +V + R PD ++ G C G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSE-AEKVLVEMDYRGVPRNVE 123
L +M + VV +N ++D LC+ + H E A + EM+ +G+ NV
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIID---SLCKYR-----HVEVAVDLFTEMETKGIRPNVV 294
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+N LI LC + DA +L M E PN TF LI + ++ +L E +++ + M
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
D Y + C R++ A ++F M + C P I+TY+ L++
Sbjct: 355 IQRSIDP--DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 244 RVDKANALFHEAQSRGLAVTPKEYAV 269
RV+ LF E RGL Y
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTT 438
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 37/283 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + VV LC +G A ++ + A I + + + +I C +E A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-------------------- 104
L EM G VV YN++++C+C R D L S
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
EAEK+ EM R + + T+N+LI C + ++A ++F M C PN
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV---EHA 213
T+ LI + R+E+G E+ M G + + TI+ G + + A
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT-----VTYTTIIQGFFQAGDCDSA 452
Query: 214 LKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
VF M ++ I TY +L+ L ++ ++D A +F Q
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
GL + + +++ G A+ + K + P + M +L+ G C GKL+ A
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + + EL + YN M++ +C+ + + + L + +V T
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS----------IKPDVVT 537
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I+ LC R ++A LF +M E G PN T+ LIR+ + E+I M+
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Query: 185 SAGF 188
S+GF
Sbjct: 598 SSGF 601
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 91/219 (41%), Gaps = 9/219 (4%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
FP + L+ K E L +M G + Y+ ++C C +
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL----- 134
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
S A VL +M G ++ T + L+ C ++ DA+ L +M E G P+ TF
Sbjct: 135 --SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
LI L+ + E ++D+M G D Y + LC ++ AL + M+
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQR--GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
A + + ++ ++ L + V+ A LF E +++G+
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 112/297 (37%), Gaps = 73/297 (24%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ + + ++ LC+ G S A R++ + L + I P+ + LI + +GKL EA
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM + + + YN +++ C R EA+++ M + N++T
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRL-------DEAKQMFKFMVSKDCLPNIQT 400
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT------------------------- 159
+N LI CK ++ ED ++LF M + G N T
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 160 ----------FVVLIRSLYQAARLEEG-------------------DEMIDRMKSAG--- 187
+ +L+ L +L+ + MI+ M AG
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 188 --------FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
D Y ++ LC ++ A +F MK DG P TY+ L+
Sbjct: 521 EAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 11/264 (4%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMV--KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
+K D +++ LC G AE ++ L P+ + LI G+C GKLE A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + M + VV N + V +CR + A ++M+ GV NV T
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTI---VGGMCRHHGLNM----AVVFFMDMEKEGVKGNVVT 478
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ LI C + E A+ + +M E GC P+ + LI L Q R + +++++K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
GF SLD AY + + C E ++ M+ +G +P TY+ L+S G H
Sbjct: 539 EGGF--SLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 245 VDKANALFHEAQSRGLAVTPKEYA 268
+ + + + GL T Y
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYG 620
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 106/232 (45%), Gaps = 26/232 (11%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P+ I C + + A + ++ + L +NA+L C L R D
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC---LGRNMDI- 310
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-GEWG-----CY 154
S ++++MD + +V T +LI LCK R+ ++AL++F +M G+
Sbjct: 311 ---SRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIK 367
Query: 155 PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE------ 208
+ F LI L + RL+E +E++ RMK L+++ +T C I+
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMK-------LEERCVPNAVTYNCLIDGYCRAG 420
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
++E A +V + MK D +P + T + ++ + H+ ++ A F + + G+
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + LI G C + +A R+ ++ GGF L ++AYN ++ C+
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD---------- 558
Query: 103 HSEAEKV---LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
+ AEKV L +M+ G + T+N LI+ K + E ++ +M E G P TT
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKA--YYQFLTILCGIERVEHALKVF 217
+ +I + L DE + K G + ++ Y + + AL +
Sbjct: 619 YGAVIDAYCSVGEL---DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 218 AMMKADGCEPGIKTYDLL 235
MK P ++TY+ L
Sbjct: 676 EEMKMKMVRPNVETYNAL 693
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 11/264 (4%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMV--KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
+K D +++ LC G AE ++ L P+ + LI G+C GKLE A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + M + VV N + V +CR + A ++M+ GV NV T
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTI---VGGMCRHHGLNM----AVVFFMDMEKEGVKGNVVT 478
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ LI C + E A+ + +M E GC P+ + LI L Q R + +++++K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
GF SLD AY + + C E ++ M+ +G +P TY+ L+S G H
Sbjct: 539 EGGF--SLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 245 VDKANALFHEAQSRGLAVTPKEYA 268
+ + + + GL T Y
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYG 620
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 111/247 (44%), Gaps = 18/247 (7%)
Query: 24 KGFASYAERMVKDLARV----IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELG 79
KG E+++ ++R + P+ I C + + A + ++ + L
Sbjct: 234 KGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLE 293
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
+NA+L C L R D S ++++MD + +V T +LI LCK R+ +
Sbjct: 294 APPFNALLSC---LGRNMDI----SRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVD 346
Query: 140 DALKLFHRM-GEWG-----CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+AL++F +M G+ + F LI L + RL+E +E++ RMK A +
Sbjct: 347 EALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAP-N 405
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y + C ++E A +V + MK D +P + T + ++ + H+ ++ A F
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 254 EAQSRGL 260
+ + G+
Sbjct: 466 DMEKEGV 472
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 31/234 (13%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + LI G C + +A R+ ++ GGF L ++AYN ++ C+ + + +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEM 568
Query: 103 HSEAEK----------------------------VLVEMDYRGVPRNVETFNVLITNLCK 134
++ EK ++ +M G+ V T+ +I C
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 135 IRKTEDALKLFHRMG-EWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ + ++ALKLF MG PN + +LI + + + + + MK +++
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
Y L + E LK+ M CEP T ++LM +L + + K
Sbjct: 689 --TYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVK 740
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 15 KVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
V+++ LC KG + ++V ++ + P+E + LI G C+ GKL++A L M
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
V Y +++ + + R D A ++L M+ RG N ++VLI+ L
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATD-------AVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG------ 187
K K E+A+ L+ +M E GC PN + VL+ L + + E E+++RM ++G
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY 433
Query: 188 ---------------------------FGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
G S +K Y + LCG+ RV+ A+ V++ M
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
G +P Y ++ L +D A L+HE
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
++ + +LI G +GK EEA L +M G + +V Y+ ++D LCR+ P
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD---GLCREGKP---- 413
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+EA+++L M G N T++ L+ K E+A++++ M + GC N+ + VL
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM--- 220
I L R++E + +M + G D AY + LCGI ++ ALK++ M
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKP--DTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ +P + TY++L+ L + +A L + RG
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 16/264 (6%)
Query: 2 ERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGK 60
ER Y L + S V++ L +G A A + + +A + P+ + +L+ G C +GK
Sbjct: 355 ERGYHLNQHIYS--VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL--LHSEAEKVLVEMDYRGV 118
EA+ + M G Y++++ K F L EA +V EMD G
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLM---------KGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
RN ++VLI LC + + ++A+ ++ +M G P+ + +I+ L ++ +
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Query: 179 MIDRMKSAGFGASL-DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+ M S D Y L LC + + A+ + M GC+P + T + ++
Sbjct: 524 LYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Query: 238 KLG-AHNRVDKANALFHEAQSRGL 260
L N DK + E R L
Sbjct: 584 TLSEKSNSCDKGRSFLEELVVRLL 607
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 17/258 (6%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
++ E L +G Y + ++ I P+ +++IK C KL R A E++RG
Sbjct: 158 IINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC---KLRFVDR-AIEVFRGM 213
Query: 76 FELGVV----AYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
E + Y ++D +C+ R + LL L EM G + +NVLI
Sbjct: 214 PERKCLPDGYTYCTLMDGLCKEERIDEAVLL-------LDEMQSEGCSPSPVIYNVLIDG 266
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
LCK KL M GC PNE T+ LI L +L++ +++RM S+
Sbjct: 267 LCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS--KCI 324
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ Y + L R A+++ + M+ G Y +L+S L + ++A +L
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 252 FHEAQSRGLAVTPKEYAV 269
+ + +G Y+V
Sbjct: 385 WRKMAEKGCKPNIVVYSV 402
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 30/269 (11%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
++G +D S +++ LC A + + L D ++++ GWC+ + +
Sbjct: 154 EHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPK 213
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCV--------------------CELCRQKDPFLLH 103
A + EM G + YN ML CE+ ++H
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 104 S--------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
A V EM GV +V T+N +I LCK E+A+ +F M G P
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
N TT+ VLIR L+ A G+E++ RM++ G + + Y + VE AL
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF--QTYNMMIRYYSECSEVEKALG 391
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+F M + C P + TY++L+S + R
Sbjct: 392 LFEKMGSGDCLPNLDTYNILISGMFVRKR 420
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 113/262 (43%), Gaps = 11/262 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +V E+ S G A ++ ++ F D A + ++ C ++E+A L +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
RG F + V YN +L+ C + R +A +VL EM RG+ N+ T+N ++
Sbjct: 188 -RGRFSVDTVTYNVILNGWCLIKRT-------PKALEVLKEMVERGINPNLTTYNTMLKG 239
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
+ + A + F M + C + T+ ++ A ++ + D M G S
Sbjct: 240 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ Y + +LC + VE+A+ +F M G EP + TY++L+ L + L
Sbjct: 300 V--ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEEL 357
Query: 252 FHEAQSRGLAVTPKEYAVDPRY 273
++ G + Y + RY
Sbjct: 358 MQRMENEGCEPNFQTYNMMIRY 379
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P A + +I+ C +E A + EM R G+E V YN ++
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRG----------- 344
Query: 101 LLH----SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
L H S E+++ M+ G N +T+N++I + + E AL LF +MG C PN
Sbjct: 345 LFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPN 404
Query: 157 ETTFVVLIRSLYQAARLEE 175
T+ +LI ++ R E+
Sbjct: 405 LDTYNILISGMFVRKRSED 423
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 3/157 (1%)
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
LH ++ M + + +TF ++ K + A+KLF M E GC+ + +F
Sbjct: 106 LHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFN 165
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
++ L ++ R+E+ E+ ++ S+D Y L C I+R AL+V M
Sbjct: 166 TILDVLCKSKRVEKAYELFRALRGR---FSVDTVTYNVILNGWCLIKRTPKALEVLKEMV 222
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
G P + TY+ ++ ++ A F E + R
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR 259
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 7/258 (2%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEE 63
YG K S K ++ L + ++ E + K++ R I P+ +++I C GK+ +
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
AR + +M G VV+YN ++D C+L + +A+ VL EM V N+
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY----KADAVLKEMVENDVSPNLT 297
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TFN+LI K ++K+F M + PN ++ LI L ++ E M D+M
Sbjct: 298 TFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
SAG +L Y + C + ++ AL +F +K G P + Y++L+
Sbjct: 358 VSAGVQPNL--ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Query: 244 RVDKANALFHEAQSRGLA 261
++D AL E + G+
Sbjct: 416 KIDDGFALKEEMEREGIV 433
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 10/194 (5%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ + LI G C GK+ EA + +M G + ++ YNA+++ C K+ L
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC-----KNDML- 382
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA + + +G +N+LI CK+ K +D L M G P+ T+
Sbjct: 383 -KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L + +E ++ D++ S G D ++ + C A + M
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGLP---DLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Query: 223 DGCEPGIKTYDLLM 236
G +P TY+++M
Sbjct: 499 MGLKPRHLTYNIVM 512
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGK 60
MER+ G+ D G+ ++ LC G A+++ L PD +L++G+C G+
Sbjct: 427 MERE-GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGE 485
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
+A L EM + G + + YN ++ C+ K + ++ EK R +
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK------ERRLRM 539
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
NV ++NVL+ + K EDA L + M E G PN T+ ++
Sbjct: 540 NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K + +V LC G + ++KD+ +R I P+ ++L+ + +GKL+EA
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM G ++ YN ++D C R SEA +L M ++ T
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRL-------SEANNMLDLMVRNKCSPDIVT 370
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
F LI C +++ +D +K+F + + G N T+ +L++ Q+ +++ +E+ M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G D Y L LC ++E AL++F ++ + GI Y ++ + +
Sbjct: 431 SHGVLP--DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V+ A LF +G+ Y V
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTV 513
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 31/293 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ + +L +++ C +A ++ + ++ + PD + LIKG ++GK+ EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQ-------KDPFLLHS---- 104
L M G + VV YN++++ +C +L R+ D F +
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
A + EM+ +G+ +V T+N L+ LCK K D L M PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
TF VL+ + +L+E +E+ M + G ++ Y + C R+ A +
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI--ITYNTLMDGYCMQNRLSEANNM 355
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+M + C P I T+ L+ RVD +F RGL Y++
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + + ++V+ C G AE + +++ + + PD +L+ G C +GKLE+A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ ++ + +LG+V Y +++ +C+ + +D A + + +GV NV T
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED-------AWNLFCSLPCKGVKPNVMT 510
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ V+I+ LCK +A L +M E G PN+ T+ LIR+ + L ++I+ MK
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Query: 185 SAGFGA 190
S GF A
Sbjct: 571 SCGFSA 576
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+++ G+ N+ T N++I C+ KT A + ++ + G P+ TTF LI+ L+
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
++ E ++DRM G D Y + +C AL + M+ + + T
Sbjct: 173 KVSEAVVLVDRMVEN--GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT 230
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
Y ++ L +D A +LF E +++G+ + Y
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 16/268 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G K D + ++ L AS A +RMV+ R PD ++ G C G
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ---RGCQPDLVTYGAVVNGLCKRGDT 234
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ A L +M E VV Y+ ++D +C+ R +D +A + EM+ +GV N
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKY-RHED------DALNLFTEMENKGVRPN 287
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T++ LI+ LC + DA +L M E PN TF LI + + +L + +++ +
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M ++ Y + C ++R+ A ++ +M C P + TY+ L++
Sbjct: 348 EMIKRSIDPNI--FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYAV 269
RVDK LF E RGL Y
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTT 433
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 10/232 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ + + ++ LC+ G S A R++ D+ R I P+ LI + GKL +A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM + + + Y+++++ C L R EA+++L M + NV T
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL-------GEAKQMLELMIRKDCLPNVVT 395
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI CK ++ + ++LF M + G N T+ LI +QA + + +M
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
S G ++ Y L LC ++ A+ VF ++ EP I TY++++
Sbjct: 456 SVGVHPNI--LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 31/280 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + VV LC +G A ++ + A I + + +I C ++A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSE------------------- 105
L EM G V+ Y++++ C+C R D L S+
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 106 ---------AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
AEK+ EM R + N+ T++ LI C + + +A ++ M C PN
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ LI +A R+++G E+ M G + Y + ++A V
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG--NTVTYTTLIHGFFQARDCDNAQMV 450
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
F M + G P I TY++L+ L + ++ KA +F Q
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
++LI +C +L A L G+M + G+E +V N++L+ C R D L +
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ--- 173
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+VEM Y+ P V TF LI L K +A+ L RM + GC P+ T+ ++ L
Sbjct: 174 -MVEMGYK--PDTV-TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ + ++++M++A A++ Y + LC + AL +F M+ G P
Sbjct: 230 KRGDTDLALNLLNKMEAAKIEANV--VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ TY L+S L + R A+ L + R
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIER 317
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 9/186 (4%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
G + YN +++C C R L + K+ G ++ T N L+ C
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKL-------GYEPDIVTLNSLLNGFCH 160
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+ DA+ L +M E G P+ TF LI L+ + E +IDRM G D
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR--GCQPDL 218
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
Y + LC + AL + M+A E + Y ++ L + D A LF E
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278
Query: 255 AQSRGL 260
+++G+
Sbjct: 279 MENKGV 284
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 29/193 (15%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +++ KG AE++ +++ R I P+ LI G+C+ +L EA+++ M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 72 YRGGFELGVVAYNAMLDCVC---------ELCRQKD-----------PFLLHS------- 104
R VV YN +++ C EL R+ L+H
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 105 -EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
A+ V +M GV N+ T+N+L+ LCK K A+ +F + P+ T+ ++
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 164 IRSLYQAARLEEG 176
I + +A + + G
Sbjct: 505 IEGMCKAGKWKMG 517
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GLK + ++ LC + AE ++ R I PD + LI G+C G + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ EM+ V+ Y A++ C++ EA K+ EM +G+ + T
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDM-------VEAGKLFHEMFCKGLEPDSVT 423
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
F LI CK +DA ++ + M + GC PN T+ LI L + L+ +E++ M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G ++ Y + LC +E A+K+ +A G TY LM
Sbjct: 484 KIGLQPNI--FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
+DKA + E +GL T + V
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNV 566
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 12/264 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +++ LC +G A ++ ++ ++ + P+ + ++ G C G +EEA +L GE
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G V Y ++D C+ +A+++L EM +G+ + TFNVL+
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEM-------DKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
C ED KL + M G PN TTF L++ L+ + M S G G
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP- 629
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
D K Y + C ++ A +F MK G + TY +L+ + +A +
Sbjct: 630 -DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 252 FHEAQSRGLAVTPK--EYAVDPRY 273
F + + GLA + ++ D +Y
Sbjct: 689 FDQMRREGLAADKEIFDFFSDTKY 712
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + S +V+ +C G A ++ + + PD ++ G+C G+L++
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L M R G + Y +++ +C +C+ +EAE+ EM +G+ +
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL-------AEAEEAFSEMIRQGILPDTVV 353
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ LI CK A K F+ M P+ T+ +I Q + E ++ M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G D + + + C ++ A +V M GC P + TY L+ L
Sbjct: 414 CKGLEP--DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 245 VDKANALFHEAQSRGL 260
+D AN L HE GL
Sbjct: 472 LDSANELLHEMWKIGL 487
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G L EARR+ +M G L V + N L + + C + + A V E GV
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT------ATAIIVFREFPEVGV 242
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
NV ++N++I +C++ + ++A L M G P+ ++ ++ + L++ +
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+I+ MK G + Y + +LC I ++ A + F+ M G P Y L+
Sbjct: 303 LIEVMKRKGLKP--NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 239 LGAHNRVDKANALFHEAQSRGLAVTP 264
+ A+ F+E SR +TP
Sbjct: 361 FCKRGDIRAASKFFYEMHSRD--ITP 384
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GLK + ++ LC + AE ++ R I PD + LI G+C G + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ EM+ V+ Y A++ C++ EA K+ EM +G+ + T
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDM-------VEAGKLFHEMFCKGLEPDSVT 423
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
F LI CK +DA ++ + M + GC PN T+ LI L + L+ +E++ M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G ++ Y + LC +E A+K+ +A G TY LM
Sbjct: 484 KIGLQPNI--FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
+DKA + E +GL T + V
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNV 566
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 12/264 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +++ LC +G A ++ ++ ++ + P+ + ++ G C G +EEA +L GE
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G V Y ++D C+ +A+++L EM +G+ + TFNVL+
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEM-------DKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
C ED KL + M G PN TTF L++ L+ + M S G G
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP- 629
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
D K Y + C ++ A +F MK G + TY +L+ + +A +
Sbjct: 630 -DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 252 FHEAQSRGLAVTPK--EYAVDPRY 273
F + + GLA + ++ D +Y
Sbjct: 689 FDQMRREGLAADKEIFDFFSDTKY 712
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + S +V+ +C G A ++ + + PD ++ G+C G+L++
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L M R G + Y +++ +C +C+ +EAE+ EM +G+ +
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL-------AEAEEAFSEMIRQGILPDTVV 353
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ LI CK A K F+ M P+ T+ +I Q + E ++ M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G D + + + C ++ A +V M GC P + TY L+ L
Sbjct: 414 CKGLEP--DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 245 VDKANALFHEAQSRGL 260
+D AN L HE GL
Sbjct: 472 LDSANELLHEMWKIGL 487
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G L EARR+ +M G L V + N L + + C + + A V E GV
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT------ATAIIVFREFPEVGV 242
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
NV ++N++I +C++ + ++A L M G P+ ++ ++ + L++ +
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+I+ MK G + Y + +LC I ++ A + F+ M G P Y L+
Sbjct: 303 LIEVMKRKGLKP--NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 239 LGAHNRVDKANALFHEAQSRGLAVTP 264
+ A+ F+E SR +TP
Sbjct: 361 FCKRGDIRAASKFFYEMHSRD--ITP 384
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 31/275 (11%)
Query: 23 SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVA 82
S F + ++ ++V+ D +LIKG C G++E++ L E+ GF VV
Sbjct: 142 SSSFNQWWSFFNENKSKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVI 200
Query: 83 YNAMLDCVC---ELCRQKDPF--------LLHSEAEKVLV-----------------EMD 114
Y ++D C E+ + KD F + + VL+ +M
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 115 YRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE 174
GV N+ T+N ++ LCK +T+DA ++F M E G N T+ LI L + +L
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 175 EGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDL 234
E ++++D+MKS G +L Y + CG+ ++ AL + +K+ G P + TY++
Sbjct: 321 EANKVVDQMKSDGINPNL--ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 235 LMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
L+S A + E + RG+ + Y +
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 10/267 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
++G + +++ C KG A+ + ++ ++ + +E +LI G +G +
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK 250
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+ + +M G + YN +++ +C+ R KD F +V EM RGV N+
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF-------QVFDEMRERGVSCNI 303
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N LI LC+ K +A K+ +M G PN T+ LI +L + +
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+KS G SL Y ++ C A K+ M+ G +P TY +L+
Sbjct: 364 LKSRGLSPSL--VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
+ ++KA L + GL Y+V
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSV 448
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 10/252 (3%)
Query: 17 VVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
V+ +LC G A ++ ++ R + + + LI G C + KL EA ++ +M G
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
++ YN ++D C + + +A + ++ RG+ ++ T+N+L++ C+
Sbjct: 334 INPNLITYNTLIDGFCGVGKL-------GKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
T A K+ M E G P++ T+ +LI + ++ +E+ ++ R+ G D
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL--RLSMEELGLVPDVH 444
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
Y + C ++ A ++F M CEP Y+ ++ +A L E
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504
Query: 256 QSRGLAVTPKEY 267
+ + LA Y
Sbjct: 505 EEKELAPNVASY 516
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ PD +LI G+C+ G++ EA RL M E V YN M + C++ +
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM---ILGYCKEGSSY 495
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
A K+L EM+ + + NV ++ +I LCK RK+++A +L +M + G P+ +
Sbjct: 496 ----RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSIL 551
Query: 161 VVLIRS 166
++ R+
Sbjct: 552 SLISRA 557
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 14/221 (6%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV--CELCRQKDPFLLHSEA 106
+++I + L + EM GF G +N +L V Q F +++
Sbjct: 98 EVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS 157
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
+ VL +V +F +LI C+ + E + L + E+G PN + LI
Sbjct: 158 KVVL----------DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
+ +E+ ++ M G A +++ Y + L + +++ M+ DG
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVA--NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF 265
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
P + TY+ +M++L R A +F E + RG++ Y
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTY 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 8/187 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + ++V C KG S A +MVK++ R I P + +LI + +E+A
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L M G V Y+ ++ C + +EA ++ M + N
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM-------NEASRLFKSMVEKNCEPNEVI 480
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I CK + ALKL M E PN ++ +I L + + +E + ++++M
Sbjct: 481 YNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Query: 185 SAGFGAS 191
+G S
Sbjct: 541 DSGIDPS 547
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 117/256 (45%), Gaps = 11/256 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + ++ LC+ G S A R++ D L + I PD + LI + +GKL EA
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 65 RRLAGEMYRGGFEL-GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
+L EM + VVAYN ++ C+ R + E +V EM RG+ N
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE-------EGMEVFREMSQRGLVGNTV 392
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+ LI + R ++A +F +M G +P+ T+ +L+ L +E + + M
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+ LD Y + LC +VE +F + G +P + TY +MS
Sbjct: 453 QKRDM--KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 244 RVDKANALFHEAQSRG 259
++A+ALF E + G
Sbjct: 511 LKEEADALFVEMKEDG 526
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 15/259 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G + D + +V L AS A ERMV + PD +I G C G+
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMV---VKGCQPDLVTYGAVINGLCKRGEP 231
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ A L +M +G E VV YN ++D +C+ D F L ++ M+ +G+ +
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK-------METKGIKPD 284
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T+N LI+ LC + DA +L M E P+ F LI + + +L E +++ D
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M + D AY + C +RVE ++VF M G TY L+
Sbjct: 345 EMVKSKHCFP-DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 242 HNRVDKANALFHEAQSRGL 260
D A +F + S G+
Sbjct: 404 ARDCDNAQMVFKQMVSDGV 422
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 113/285 (39%), Gaps = 32/285 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + V+ LC +G A ++ + + I D + + +I G C +++A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-------------------- 104
L +M G + V YN ++ C+C R D L S
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 105 --------EAEKVLVEM-DYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
EAEK+ EM + +V +N LI CK ++ E+ +++F M + G
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
N T+ LI +QA + + +M S G D Y L LC VE AL
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP--DIMTYNILLDGLCNNGNVETALV 447
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
VF M+ + I TY ++ L +V+ LF +G+
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ PD ++L+ G C +G +E A + M + +L +V Y M++ +C+ + +D +
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+ + +GV NV T+ +++ C+ E+A LF M E G PN T+
Sbjct: 482 -------DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 161 VVLIRSLYQAARLEEGDE-----MIDRMKSAGFGA 190
LIR ARL +GDE +I M+S GF
Sbjct: 535 NTLIR-----ARLRDGDEAASAELIKEMRSCGFAG 564
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 92/230 (40%), Gaps = 11/230 (4%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
FP L+ K + L +M G + Y+ ++ C +
Sbjct: 72 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQL----- 126
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
S A +L +M G ++ T N L+ C + +A+ L +M E G P+ TF
Sbjct: 127 --SLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
L+ L+Q + E +++RM G D Y + LC + AL + M+
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVK--GCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDP 271
E + Y+ ++ L + +D A LF++ +++G + P + +P
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG--IKPDVFTYNP 290
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 31/270 (11%)
Query: 16 VVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
VVV LC +G A ++ + A I D + + +I C +++A L EM
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHS----------------------------EA 106
G VV Y++++ C+C R D L S EA
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
EK+ +M R + ++ T+N L+ C + + A ++F M C+P+ T+ LI+
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
++ R+E+G E+ M G D Y + L ++A KVF M +DG
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
P I TY +L+ L + +++KA +F Q
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 16/268 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G + D + ++ L AS A +RMV+ R P+ +++ G C G
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ---RGCQPNLVTYGVVVNGLCKRGDT 241
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ A L +M E VV +N ++D +C+ R D +A + EM+ +G+ N
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKY-RHVD------DALNLFKEMETKGIRPN 294
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T++ LI+ LC + DA +L M E PN TF LI + + + E +++ D
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M D Y + C +R++ A ++F M + C P + TY+ L+
Sbjct: 355 DMIKRSIDP--DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYAV 269
RV+ LF E RGL Y
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTT 440
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 9/206 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
++LI +C ++ A L G+M + G+E +V +++L+ C R D L +
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ--- 180
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+VEM YR P + TF LI L K +A+ L RM + GC PN T+ V++ L
Sbjct: 181 -MVEMGYR--PDTI-TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ + ++++M++A A D + + LC V+ AL +F M+ G P
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEA--DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHE 254
+ TY L+S L ++ R A+ L +
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSD 320
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ + + ++ LCS G S A +++ D+ + I P+ + LI + +GK EA
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L +M + + + YN++++ C R +A+++ M + +V T
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL-------DKAKQMFEFMVSKDCFPDVVT 402
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI CK ++ ED +LF M G + T+ LI+ L+ + ++ +M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G D Y L LC ++E AL+VF M+ + I Y ++ + +
Sbjct: 463 SDGVPP--DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 245 VDKANALFHEAQSRGL 260
VD LF +G+
Sbjct: 521 VDDGWDLFCSLSLKGV 536
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 116/248 (46%), Gaps = 10/248 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +++ +G AE++ D+ R I PD + L+ G+C+ +L++A+++ M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
VV YN ++ C+ R +D ++ EM +RG+ + T+ LI
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVED-------GTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
L ++A K+F +M G P+ T+ +L+ L +LE+ E+ D M+ +
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI--K 502
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
LD Y + +C +V+ +F + G +P + TY+ ++S L + + +A AL
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 252 FHEAQSRG 259
+ + G
Sbjct: 563 LKKMKEDG 570
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
GL D + +++ L G A+++ K + P + M +L+ G C +GKLE+A
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ M + +L + Y M++ +C+ + D + + + +GV NV T
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW-------DLFCSLSLKGVKPNVVT 542
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD-----EM 179
+N +I+ LC R ++A L +M E G PN T+ LIR A L +GD E+
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR-----AHLRDGDKAASAEL 597
Query: 180 IDRMKSAGF 188
I M+S F
Sbjct: 598 IREMRSCRF 606
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
FPD + LIKG+C ++E+ L EM G V Y ++ L
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG-----------L 445
Query: 102 LHS----EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
H A+KV +M GVP ++ T+++L+ LC K E AL++F M + +
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
+ +I + +A ++++G ++ + G ++ Y ++ LC ++ A +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV--VTYNTMISGLCSKRLLQEAYALL 563
Query: 218 AMMKADGCEPGIKTYDLLM 236
MK DG P TY+ L+
Sbjct: 564 KKMKEDGPLPNSGTYNTLI 582
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 9/209 (4%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
K + L +M R G+ YN +++C C + S A +L +M G
Sbjct: 100 KFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQI-------SLALALLGKMMKLGYE 152
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
++ T + L+ C ++ DA+ L +M E G P+ TF LI L+ + E +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+DRM G +L Y + LC + AL + M+A E + ++ ++ L
Sbjct: 213 VDRMVQRGCQPNL--VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+ VD A LF E +++G+ Y+
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYS 299
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 16/259 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ D + ++ L + G + A R+++D+ R I P+ LI + +G L EA
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS---EAEKVLVEMDYRGVPRN 121
R L EM R V YN++++ C +H +A+ + M +G +
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFC----------IHGCLGDAKYMFDLMVSKGCFPD 323
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T+N LIT CK ++ ED +KLF M G + T+ LI QA +L ++ +
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
RM G S D Y L LC ++E AL + ++ + I TY++++ L
Sbjct: 384 RMVDC--GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 242 HNRVDKANALFHEAQSRGL 260
+++ +A LF +G+
Sbjct: 442 TDKLKEAWCLFRSLTRKGV 460
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 9/229 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I D + LI G G+ +A RL +M + + V+ + A++D K+
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV-----KEGN 269
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
LL EA + EM R V NV T+N LI C DA +F M GC+P+ T+
Sbjct: 270 LL--EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI ++ R+E+G ++ M G D Y + C ++ A KVF M
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVG--DAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G P I TY++L+ L + +++KA + + Q + V Y +
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ LI G+C GKL A+++ M G +V YN +LDC+C + + ++ + +K
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+++D + T+N++I LC+ K ++A LF + G P+ ++ +I L
Sbjct: 423 SEMDVD-------IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Query: 169 QAARLEEGDEMIDRMKSAGFGAS 191
+ E D++ RMK GF S
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPS 498
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 44/232 (18%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQ 96
+ R + P+ + LI G+C+ G L +A+ + M G VV YN ++ C+ R
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 97 KDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+D K+ EM Y+G+ + T+N LI C+ K A K+F+RM + G P+
Sbjct: 341 ED-------GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 157 ETTFVVLIRSLYQAARLEEGDEMI-------------------------DRMKSAGF--- 188
T+ +L+ L ++E+ M+ D++K A
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 189 -----GASLDKKAYYQFLTILC--GIERVEHALKVFAMMKADGCEPGIKTYD 233
G D AY ++ LC G++R A K+ MK DG P + YD
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQR--EADKLCRRMKEDGFMPSERIYD 503
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 40/245 (16%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
+LI +C +L A L G+M + GF +V ++L+ C Q + F EA +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC----QGNRF---QEAVSL 171
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
+ MD G NV +N +I LCK R +AL++F+ M + G + T+ LI L
Sbjct: 172 VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSN 231
Query: 170 AARLEEGDEMIDRM-------KSAGFGASLDK--------------------------KA 196
+ R + ++ M F A +D
Sbjct: 232 SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 291
Query: 197 YYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
Y + C + A +F +M + GC P + TY+ L++ RV+ LF E
Sbjct: 292 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 257 SRGLA 261
+GL
Sbjct: 352 YQGLV 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 9/201 (4%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
K ++A L EM + +V + +L + ++ + L+ + E + G+
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL-------GIS 111
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
++ +F +LI C+ + AL L +M + G P+ T L+ Q R +E +
Sbjct: 112 HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL 171
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+D M GFG + Y + LC + +AL+VF M+ G TY+ L+S L
Sbjct: 172 VDSMD--GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
Query: 240 GAHNRVDKANALFHEAQSRGL 260
R A L + R +
Sbjct: 230 SNSGRWTDAARLLRDMVKRKI 250
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + ++ C G + A+++ + + PD ++L+ C +GK+E+A
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ ++ + ++ ++ YN ++ +C + K+ + L + +GV +
Sbjct: 414 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR-------KGVKPDAIA 466
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE 174
+ +I+ LC+ +A KL RM E G P+E + +R Y + E
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 516
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 113/250 (45%), Gaps = 10/250 (4%)
Query: 12 GSLKVVVEKLCSKGFASYA-ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGE 70
G L ++ LC G S A E + L + D + L+ G C GKL+EA R+ E
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
+ G + V+YN ++ C + + F+ L EM RG+ + T+++LI
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF-------LDEMVKRGLKPDNYTYSILIC 583
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
L + K E+A++ + G P+ T+ V+I +A R EEG E D M S
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK--NV 641
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
+ Y + C R+ AL++ MK G P TY L+ + +RV++A
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 251 LFHEAQSRGL 260
LF E + GL
Sbjct: 702 LFEEMRMEGL 711
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 9/221 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ LIKG+C +G+ + A RL EM GF + ++ ++ +C LC L+ A +
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV---ICLLCSH----LMFDSALR 456
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ EM R + LI+ LCK K AL+L+ + G + T L+ L
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+A +L+E + + + G G +D+ +Y ++ CG ++++ A M G +P
Sbjct: 517 EAGKLDEAFRI--QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY +L+ L N+V++A + + + G+ Y+V
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 40/258 (15%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ PD + I +C GK+EEA +L +M G VV +N ++D + +C + D
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL-GMCGRYDEA 314
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+ E +M RG+ + T+++L+ L + ++ DA + M + G PN +
Sbjct: 315 FMFKE------KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGF-------------------------------- 188
LI S +A L + E+ D M S G
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 189 -GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
G ++++ ++ + +LC + AL+ M PG L+S L H + K
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 248 ANALFHEAQSRGLAVTPK 265
A L+ + ++G V +
Sbjct: 489 ALELWFQFLNKGFVVDTR 506
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 116 RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
+GV +V F I CK K E+A+KLF +M E G PN TF +I L R +E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 176 GDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
++M G +L Y + L +R+ A V M G P + Y+ L
Sbjct: 314 AFMFKEKMVERGMEPTL--ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 236 MSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+ ++KA + S+GL++T Y
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 403
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
AL +F + G +P++TT +L+ SL +A ++ E D + G S D +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK---GVSPDVYLFTTA 266
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ C +VE A+K+F+ M+ G P + T++ ++ LG R D+A + RG+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 261 AVTPKEYAV 269
T Y++
Sbjct: 327 EPTLITYSI 335
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 113/250 (45%), Gaps = 10/250 (4%)
Query: 12 GSLKVVVEKLCSKGFASYA-ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGE 70
G L ++ LC G S A E + L + D + L+ G C GKL+EA R+ E
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
+ G + V+YN ++ C + + F+ L EM RG+ + T+++LI
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF-------LDEMVKRGLKPDNYTYSILIC 583
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
L + K E+A++ + G P+ T+ V+I +A R EEG E D M S
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK--NV 641
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
+ Y + C R+ AL++ MK G P TY L+ + +RV++A
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 251 LFHEAQSRGL 260
LF E + GL
Sbjct: 702 LFEEMRMEGL 711
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 9/221 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ LIKG+C +G+ + A RL EM GF + ++ ++ +C LC L+ A +
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV---ICLLCSH----LMFDSALR 456
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ EM R + LI+ LCK K AL+L+ + G + T L+ L
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+A +L+E + + + G G +D+ +Y ++ CG ++++ A M G +P
Sbjct: 517 EAGKLDEAFRI--QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY +L+ L N+V++A + + + G+ Y+V
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 40/258 (15%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ PD + I +C GK+EEA +L +M G VV +N ++D + +C + D
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL-GMCGRYDEA 314
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+ E +M RG+ + T+++L+ L + ++ DA + M + G PN +
Sbjct: 315 FMFKE------KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGF-------------------------------- 188
LI S +A L + E+ D M S G
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 189 -GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
G ++++ ++ + +LC + AL+ M PG L+S L H + K
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 248 ANALFHEAQSRGLAVTPK 265
A L+ + ++G V +
Sbjct: 489 ALELWFQFLNKGFVVDTR 506
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 116 RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
+GV +V F I CK K E+A+KLF +M E G PN TF +I L R +E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 176 GDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
++M G +L Y + L +R+ A V M G P + Y+ L
Sbjct: 314 AFMFKEKMVERGMEPTL--ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 236 MSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+ ++KA + S+GL++T Y
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 403
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
AL +F + G +P++TT +L+ SL +A ++ E D + G S D +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK---GVSPDVYLFTTA 266
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ C +VE A+K+F+ M+ G P + T++ ++ LG R D+A + RG+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 261 AVTPKEYAV 269
T Y++
Sbjct: 327 EPTLITYSI 335
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 9/227 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD L+ G+C ++E+A L ++ GF+ VV Y ++ C+C K+ L
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC-----KNRHLN 205
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
H A ++ +M G NV T+N L+T LC+I + DA L M + PN TF
Sbjct: 206 H--AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + + +L E E+ + M D Y + LC ++ A ++F +M+
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQ--MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+GC P Y L+ RV+ +F+E +G+ Y V
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G K + + ++ LC ++A + + P+ + L+ G C G+ +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M + E V+ + A++D ++ + + E V+++M V +V T
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA----KELYNVMIQMS---VYPDVFT 295
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ LI LC ++A ++F+ M GCYPNE + LI ++ R+E+G ++ M
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G A + Y + C + R + A +VF M + P I+TY++L+ L + +
Sbjct: 356 QKGVVA--NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V+KA +F + R + + Y +
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTI 438
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 9/227 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
++PD LI G C+ G L+EAR++ M R G V Y ++ C+ R +D
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED-- 346
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
K+ EM +GV N T+ VLI C + + + A ++F++M P+ T+
Sbjct: 347 -----GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
VL+ L ++E+ + + M+ ++ Y + +C + +VE A +F +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREM--DINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+ G +P + TY ++S + +A++LF + + G Y
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 29/201 (14%)
Query: 17 VVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
++ LC G A +M + R +P+E + LI G+C ++E+ ++ EM + G
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 76 FELGVVAYNAMLDCVCELCRQK-------------------------DPFLLHSEAEKVL 110
+ Y ++ C + R D + + EK L
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 111 VEMDY---RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
+ +Y R + N+ T+ ++I +CK+ K EDA LF + G PN T+ +I
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Query: 168 YQAARLEEGDEMIDRMKSAGF 188
+ + E D + +MK GF
Sbjct: 479 CRRGLIHEADSLFKKMKEDGF 499
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M G+P + T N+++ +C + A +M + G P+ TF L+
Sbjct: 108 QMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN 167
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
R+E+ + D++ GF ++ Y + LC + HA+++F M +G P + T
Sbjct: 168 RIEDAIALFDQILGMGFKPNV--VTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSR 258
Y+ L++ L R A L + R
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKR 252
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 84 NAMLDCVC---ELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
N ++ CVC + CR A L +M G ++ TF L+ C + ED
Sbjct: 122 NIVMHCVCLSSQPCR----------ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIED 171
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
A+ LF ++ G PN T+ LIR L + L E+ ++M + G+ + Y
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN--GSRPNVVTYNAL 229
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
+T LC I R A + M EP + T+ L+ ++ +A L++
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 41/294 (13%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERM---VKDLARVIFPDEAMCDMLIKGWCVDGKLEEARR 66
D S +++ L GFA+ + +K+ V+ D +++I G+C GK+ +A +
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVL--DTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK------------------ 108
L EM GFE VV Y +++D + ++ R + ++L EA+
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 109 ----------VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
+L E+ +G+ N+ T+N L+ L K + +AL F M E C PN+
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER---VEHALK 215
T+ +LI L + + + M+ G K + + T++ G+ + + A
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGM-----KPSTISYTTMISGLAKAGNIAEAGA 783
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+F KA+G P Y+ ++ L NR A +LF E + RGL + K V
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVV 837
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P + LI+G+ +G+++ A L EM + +V YN +D ++ +
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV------ 254
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A K E++ G+ + T+ +I LCK + ++A+++F + + P +
Sbjct: 255 -DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+I A + +E +++R ++ G S+ AY LT L + +V+ ALKVF MK
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSV--IAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
D P + TY++L+ L ++D A L Q GL
Sbjct: 372 DAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 30/292 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVI-FPDEAMCDMLIKGWCVDGKLEEA 64
GLK D + ++ LC A M + L + P + +I G+ GK +EA
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK----------VLVEMD 114
L G V+AYN +L C+ ++ + + + E +K +L++M
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDML 387
Query: 115 YR-----------------GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
R G+ NV T N+++ LCK +K ++A +F M C P+E
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
TF LI L + R+++ ++ ++M + + Y + R E K++
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDS--DCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M C P ++ + M + +K A+F E ++R + Y++
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 96/218 (44%), Gaps = 11/218 (5%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LIK + G+ E+ ++ +M + N +DC + + +P + +
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC---MFKAGEP----EKGRAMF 540
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
E+ R + ++++LI L K + +LF+ M E GC + + ++I +
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
++ + ++++ MK+ GF ++ Y + L I+R++ A +F K+ E +
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTV--VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
Y L+ G R+D+A + E +GL TP Y
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGL--TPNLYT 694
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ LI + ++ L LF +M E G P F LIR + R++ ++D MK
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S+ A D Y + + +V+ A K F ++A+G +P TY ++ L NR
Sbjct: 231 SSSLDA--DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 245 VDKANALF-HEAQSRGLAVT 263
+D+A +F H ++R + T
Sbjct: 289 LDEAVEMFEHLEKNRRVPCT 308
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 31/270 (11%)
Query: 16 VVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
VVV LC +G A ++ + A I D + + +I C +++A L EM
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHS----------------------------EA 106
G VV Y++++ C+C R D L S EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
EK+ +M R + ++ T+N LI C + + A ++F M C+P+ T+ LI+
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
++ R+E+G E+ M G D Y + L ++A KVF M +DG
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
P I TY +L+ L + +++KA +F Q
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 16/268 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G + D + ++ L AS A +RMV+ R P+ +++ G C G +
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ---RGCQPNLVTYGVVVNGLCKRGDI 166
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ A L +M E VV +N ++D +C+ R D +A + EM+ +G+ N
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY-RHVD------DALNLFKEMETKGIRPN 219
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T++ LI+ LC + DA +L M E PN TF LI + + + E +++ D
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M D Y + C +R++ A ++F M + C P + TY+ L+
Sbjct: 280 DMIKRSIDP--DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYAV 269
RV+ LF E RGL Y
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTT 365
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
++LI +C ++ A L G+M + G+E +V +++L+ C R D L +
Sbjct: 49 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ--- 105
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+VEM YR P + TF LI L K +A+ L RM + GC PN T+ V++ L
Sbjct: 106 -MVEMGYR--PDTI-TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ ++ ++++M++A A D + + LC V+ AL +F M+ G P
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEA--DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHE 254
+ TY L+S L ++ R A+ L +
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSD 245
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ + + ++ LCS G S A +++ D+ + I P+ + LI + +GK EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L +M + + + YN++++ C R +A+++ M + +++T
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL-------DKAKQMFEFMVSKDCFPDLDT 327
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI CK ++ ED +LF M G + T+ LI+ L+ + ++ +M
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G D Y L LC ++E AL+VF M+ + I Y ++ + +
Sbjct: 388 SDGVPP--DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 245 VDKANALFHEAQSRGL 260
VD LF +G+
Sbjct: 446 VDDGWDLFCSLSLKGV 461
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
GL D + +++ L G A+++ K + P + M +L+ G C +GKLE+A
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ M + +L + Y M++ +C+ + D + + + +GV NV T
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW-------DLFCSLSLKGVKPNVVT 467
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD-----EM 179
+N +I+ LC R ++A L +M E G P+ T+ LIR A L +GD E+
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR-----AHLRDGDKAASAEL 522
Query: 180 IDRMKSAGF 188
I M+S F
Sbjct: 523 IREMRSCRF 531
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 9/201 (4%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
K + L +M R G + YN +++C C + S A +L +M G
Sbjct: 25 KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI-------SLALALLGKMMKLGYE 77
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
++ T + L+ C ++ DA+ L +M E G P+ TF LI L+ + E +
Sbjct: 78 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 137
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+DRM G +L Y + LC ++ A + M+A E + ++ ++ L
Sbjct: 138 VDRMVQRGCQPNL--VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 240 GAHNRVDKANALFHEAQSRGL 260
+ VD A LF E +++G+
Sbjct: 196 CKYRHVDDALNLFKEMETKGI 216
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
FPD + LIKG+C ++E+ L EM G V Y ++ L
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG-----------L 370
Query: 102 LHS----EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
H A+KV +M GVP ++ T+++L+ LC K E AL++F M + +
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
+ +I + +A ++++G ++ + G ++ Y ++ LC ++ A +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV--VTYNTMISGLCSKRLLQEAYALL 488
Query: 218 AMMKADGCEPGIKTYDLLM 236
MK DG P TY+ L+
Sbjct: 489 KKMKEDGPLPDSGTYNTLI 507
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G K D ++ C G ++++D+ R I PD LI + +GKL EA
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM + G V Y +++D C+ Q D +A +L M +G N+ T
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKE-NQLD------KANHMLDLMVSKGCGPNIRT 389
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN+LI CK +D L+LF +M G + T+ LI+ + +LE E+ M
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S D +Y L LC E AL++F ++ E I Y++++ + ++
Sbjct: 450 SRRVRP--DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
VD A LF +G+ K Y +
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNI 532
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 45/298 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++ LC +G S A +V + + P + L+ G C++GK+ +A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L M GF+ V Y +L +C+ + + A ++L +M+ R + +
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT-------ALAMELLRKMEERKIKLDAVK 249
Query: 125 FNVLITNLCKIRKTEDALKLFHRM----------------------GEWG---------- 152
++++I LCK ++A LF+ M G W
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 153 ---CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER 209
P+ F LI + +L E +E+ M G S D Y + C +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI--SPDTVTYTSLIDGFCKENQ 367
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
++ A + +M + GC P I+T+++L++ N +D LF + RG+ Y
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +++ C G A+ + +++ +R + PD +L+ G C +G+ E+A
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ ++ + EL + YN ++ +C + D A + + +GV +V+T
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD-------AWDLFCSLPLKGVKPDVKT 529
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD-----EM 179
+N++I LCK +A LF +M E G PN T+ +LIR A L EGD ++
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR-----AHLGEGDATKSAKL 584
Query: 180 IDRMKSAGFGA 190
I+ +K GF
Sbjct: 585 IEEIKRCGFSV 595
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 44/224 (19%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R + D + LI+G+C GKLE A+ L EM +V+Y +LD +C+ +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
+ + EK +E+D + +N++I +C K +DA LF + G P+
Sbjct: 476 ALEIFEKIEKSKMELD-------IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T+ ++I L + L E D + F
Sbjct: 529 TYNIMIGGLCKKGSLSEADLL-------------------------------------FR 551
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
M+ DG P TY++L+ K+ L E + G +V
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 52 IKGWCVDGKLEEARRLAGEMYRG-------GFE--LGVVAYNAMLDCVCELCRQKDPFLL 102
++ VD K ++A L EM R F VVA D V +LC+Q
Sbjct: 44 LRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ------ 97
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
M+ +G+ N+ T +++I C+ RK A ++ + G P+ TF
Sbjct: 98 ----------MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFST 147
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L R+ E E++DRM G +L + LC +V A+ + M
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTL--ITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G +P TY ++ + + A L + + R + + +Y++
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 33/274 (12%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++++ L KG S A++M D+ R I P+ +LI G C G ++AR+L EM
Sbjct: 200 TFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 72 YRGGFELGVVAYNAMLDCVCELCR-----------QKDPFLL-----------------H 103
G VA+NA+LD C+L R +KD F+L +
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRY 319
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
++A ++ M + + ++ + +LI L K K EDALKL M G P+ + +
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 164 IRSLYQAARLEEGDEM-IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
I++L LEEG + ++ ++ F D + + +C V A ++F ++
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFP---DACTHTILICSMCRNGLVREAEEIFTEIEK 436
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
GC P + T++ L+ L + +A L H+ +
Sbjct: 437 SGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 12/203 (5%)
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLH--------SEAEKVLVEMDYRGVPRNVETFNV 127
F L YN ML C C L+ S+A+K+ +M RG+ N T+ +
Sbjct: 179 FMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
LI+ LC+ +DA KLF+ M G YP+ L+ + R+ E E++ + G
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
F L + Y + L R A +++A M +P I Y +L+ L +++
Sbjct: 299 FVLGL--RGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIED 356
Query: 248 ANALFHEAQSRGLAVTPKEYAVD 270
A L S+G ++P Y +
Sbjct: 357 ALKLLSSMPSKG--ISPDTYCYN 377
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 28/260 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
+K D ++++ L G A +++ + ++ I PD + +IK C G LEE
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R L EM + + +C +CR L EAE++ E++ G +V T
Sbjct: 393 RSLQLEMSETESFPDACTHTIL---ICSMCRNG----LVREAEEIFTEIEKSGCSPSVAT 445
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWG---------CYPNETTFVVLIRS--LYQAARL 173
FN LI LCK + ++A L H+M E G + +F ++ S + +A R
Sbjct: 446 FNALIDGLCKSGELKEARLLLHKM-EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYR- 503
Query: 174 EEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYD 233
D A G+S D +Y + C ++ ALK+ +++ G P TY+
Sbjct: 504 -------DLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYN 556
Query: 234 LLMSKLGAHNRVDKANALFH 253
L++ L R ++A LF+
Sbjct: 557 TLINGLHRVGREEEAFKLFY 576
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
+ L E+ GV + F VLI+ K+ E A++ F RM E+ C P+ T+ V++R +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 168 YQAARLEEGDEMIDRMKSAGFGASLD---KKAYYQFLTILCGIE---RVEHALKVFAMMK 221
+ +E+ + A + L Y F ++ G+ R A K+F M
Sbjct: 173 MR-------EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMT 225
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
G P TY +L+S L D A LF+E Q+ G
Sbjct: 226 GRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSG 263
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 124/293 (42%), Gaps = 31/293 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + VVV LC +G A ++ + + + P + + +I G C +++A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-------------------- 104
L EM G VV Y++++ C+C R D L S
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
EAEK+ EM R + ++ T++ LI C + ++A ++F M C+P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ LI+ + R+EEG E+ M G + Y + L + A ++
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG--NTVTYNILIQGLFQAGDCDMAQEI 453
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
F M +DG P I TY+ L+ L + +++KA +F Q + T Y +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 21/226 (9%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV-----CELCRQ 96
FPD + LIKG+C ++EE + EM + G V YN ++ + C++
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM--- 449
Query: 97 KDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
A+++ EM GVP N+ T+N L+ LCK K E A+ +F + P
Sbjct: 450 ---------AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ ++I + +A ++E+G ++ + G D AY ++ C E A +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP--DVVAYNTMISGFCRKGSKEEADAL 558
Query: 217 FAMMKADGCEPGIKTYDLLM-SKLGAHNRVDKANALFHEAQSRGLA 261
F MK DG P Y+ L+ ++L +R + + L E +S G A
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDR-EASAELIKEMRSCGFA 603
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
+LI +C +L A + G+M + G+E +V +++L+ C R SEA +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI-------SEAVAL 173
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
+ +M G N TFN LI L K +A+ L RM GC P+ T+ V++ L +
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
+ ++++M+ + Y + LC + ++ AL +F M+ G P +
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGV--LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 230 KTYDLLMSKLGAHNRVDKANALFHEAQSR 258
TY L+S L + R A+ L + R
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIER 320
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 103/260 (39%), Gaps = 40/260 (15%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ + LI G + K EA L M G + +V Y +++ LC++ D L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN---GLCKRGDTDL- 239
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A +L +M+ + V +N +I LCK + +DAL LF M G PN T+
Sbjct: 240 ---AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 163 LIRSLYQAARLEEG----DEMIDRMKSA---GFGASLDK--------------------- 194
LI L R + +MI+R + F A +D
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 195 -----KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
Y + C +R++ A ++F M + C P + TY+ L+ + RV++
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 250 ALFHEAQSRGLAVTPKEYAV 269
+F E RGL Y +
Sbjct: 417 EVFREMSQRGLVGNTVTYNI 436
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 9/219 (4%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
FP L+ K + L +M G Y+ +++C C R + P
Sbjct: 78 FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR--RSQLPLA 135
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
L VL +M G N+ T + L+ C ++ +A+ L +M G PN TF
Sbjct: 136 L-----AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
LI L+ + E +IDRM + G D Y + LC + A + M+
Sbjct: 191 TLIHGLFLHNKASEAMALIDRMVAK--GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
EPG+ Y+ ++ L + +D A LF E +++G+
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA-ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + S ++ LC+ G A + + L R P+ L+KG + G +A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 65 RRLAGEMYRG-GFELGVVAYNAMLDCVCELCRQKDPFLLHS---EAEKVLVEMDYRGVPR 120
L +M RG G + VVAYN ++ C H +A V M+ G
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCS----------HGNIVKAVSVFSHMEEIGCSP 385
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
N+ T+ LI K + A+ ++++M GC PN + ++ +L + ++ +E + +I
Sbjct: 386 NIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI 445
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLMSKL 239
+ M S+ + F+ LC R++ A KVF M+ C P I TY+ L+ L
Sbjct: 446 EIMSKENCAPSV--PTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEY 267
NR+++A L E RG+ + Y
Sbjct: 504 AKANRIEEAYGLTREIFMRGVEWSSSTY 531
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 15/260 (5%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDG 59
M+RD G + + + V+++ LC A++++ +++ + PD +I C G
Sbjct: 172 MKRD-GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
++E R LA FE V YNA+++ LC++ D + A +++ EM +G+
Sbjct: 231 LVKEGRELAER-----FEPVVSVYNALIN---GLCKEHD----YKGAFELMREMVEKGIS 278
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
NV +++ LI LC + E A +M + GC+PN T L++ + + ++
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
++M GFG + AY + C + A+ VF+ M+ GC P I+TY L++
Sbjct: 339 WNQMIR-GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 240 GAHNRVDKANALFHEAQSRG 259
+D A ++++ + G
Sbjct: 398 AKRGSLDGAVYIWNKMLTSG 417
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYR---GGFELGVVAYNAMLDCVCELCRQKDPFLLHSE 105
D+ I V ++ A R YR G + V YN +LD + R + ++++ +
Sbjct: 112 DLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRD 171
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
M G NV T+NVL+ LCK K + A KL M GC P+ ++ +I
Sbjct: 172 -------MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGC 225
S+ + ++EG E+ +R + Y + LC + A ++ M G
Sbjct: 225 SMCEVGLVKEGRELAERFEPV-------VSVYNALINGLCKEHDYKGAFELMREMVEKGI 277
Query: 226 EPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
P + +Y L++ L +++ A + + RG
Sbjct: 278 SPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 9/223 (4%)
Query: 17 VVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+VE LC AE +++ +++ P + IKG C G+L+ A ++ +M +
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 76 -FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
+V YN +LD + + R + EA + E+ RGV + T+N L+ C
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIE-------EAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
AL+L +M G P+E T ++I + + + E +M+D + D
Sbjct: 541 AGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDV 600
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+Y + LC E + + M + G P I T+ +L++
Sbjct: 601 ISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 18/262 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLE 62
D G+K + + +++ LC +G AE ++ +++A+ + P+E + + +I G+C G L
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
AR M + G + +AYN ++ CEL ++ AEK + +M +GV +V
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN-------AEKEVNKMKLKGVSPSV 459
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD----E 178
ET+N+LI + + + + M + G PN ++ LI L + ++L E +
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
M DR G S + Y + C ++E A + M G E + TY+ L+
Sbjct: 520 MEDR------GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 239 LGAHNRVDKANALFHEAQSRGL 260
L ++ +A L E +GL
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGL 595
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 10/233 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + ++ + C G AE+ V + + + P ++LI G+ + ++
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ EM G VV+Y +++C+C K LL EA+ V +M+ RGV V
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLC-----KGSKLL--EAQIVKRDMEDRGVSPKVRI 531
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI C K EDA + M + G N T+ LI L +L E ++++ +
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
G D Y ++ V+ + ++ MK G +P +KTY LL+S
Sbjct: 592 RKGLKP--DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 112/279 (40%), Gaps = 41/279 (14%)
Query: 15 KVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
V+++ LC + AE++ + LAR + P + LI G+C G E++ ++ M
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKA 277
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
E ++ +N +L + + +D AE VL EM G + TF++L
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVED-------AENVLKEMKDLGFVPDAFTFSILFDGYS 330
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF----- 188
K E AL ++ + G N T +L+ +L + ++E+ +E++ R + G
Sbjct: 331 SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390
Query: 189 ----------------------------GASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
G D AY + C + +E+A K M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
K G P ++TY++L+ G DK + E + G
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLE 62
D G + S ++ LC A+ + +D+ R + P + +MLI G C GK+E
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A R + EM + G EL +V YN ++D + + SEAE +L+E+ +G+ +V
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL-------SEAEDLLLEISRKGLKPDV 599
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N LI+ + + L+ M G P T+ +LI + +EG E+ +R
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-----SLCTKEGIELTER 654
Query: 183 M 183
+
Sbjct: 655 L 655
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
V YN ++D +C+ R D AE++ EM R + ++ T+N LI CK
Sbjct: 213 SVFIYNVLIDGLCKGKRMND-------AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
E + K+ RM P+ TF L++ L++A +E+ + ++ MK GF D +
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP--DAFTFS 323
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
E+ E AL V+ G + T +L++ L +++KA + ++
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 259 GLAVTPKE 266
GL P E
Sbjct: 384 GLV--PNE 389
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
K+ L+LF+RM YP+ + VLI L + R+ + +++ D M + SL
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSL- 249
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y + C E + KV MKAD EP + T++ L+ L V+ A +
Sbjct: 250 -ITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 254 EAQSRGLA 261
E + G
Sbjct: 309 EMKDLGFV 316
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ + + ++ LC+ S A R++ D+ R I P+ + LI + +GKL EA
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM + + + Y+++++ C R EA+ + M + NV T
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-------DEAKHMFELMISKDCFPNVVT 402
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI CK ++ ++ ++LF M + G N T+ LI +QA + + +M
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G ++ Y L LC ++E A+ VF ++ EP I TY++++ + +
Sbjct: 463 SDGVHPNI--MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 245 VDKANALFHEAQSRGL 260
V+ LF +G+
Sbjct: 521 VEDGWDLFCSLSLKGV 536
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 31/283 (10%)
Query: 16 VVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
VVV LC +G A ++ + A I + + +I C ++A L EM
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHS----------------------------EA 106
G V+ Y++++ C+C R D L S EA
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
EK+ EM R + ++ T++ LI C + ++A +F M C+PN T+ LI
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
+A R++EG E+ M G + Y + ++A VF M +DG
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVG--NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
P I TY+ L+ L + +++KA +F Q + T Y +
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 9/210 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
++LI +C ++ A L G+M + G+E +V +++L+ C R D L +
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ--- 180
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+VEM YR P + TF LI L K +A+ L RM + GC PN T+ V++ L
Sbjct: 181 -MVEMGYR--PDTI-TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ ++ ++++M++A A++ Y + LC + AL +F M+ G P
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANV--VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ TY L+S L + R A+ L + R
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIER 324
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 101/260 (38%), Gaps = 40/260 (15%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD LI G + K EA L M + G + +V Y +++ LC++ D L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN---GLCKRGDIDL- 243
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A +L +M+ + NV ++ +I +LCK R +DAL LF M G PN T+
Sbjct: 244 ---AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 163 LIRSLYQAARLEEGDEMIDRM-------KSAGFGASLDK--------------------- 194
LI L R + ++ M F A +D
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 195 -----KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
Y + C +R++ A +F +M + C P + TY+ L++ R+D+
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 250 ALFHEAQSRGLAVTPKEYAV 269
LF E RGL Y
Sbjct: 421 ELFREMSQRGLVGNTVTYTT 440
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
K + L +M R G + YN +++C C + S A +L +M G
Sbjct: 100 KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI-------SLALALLGKMMKLGYE 152
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
++ T + L+ C ++ DA+ L +M E G P+ TF LI L+ + E +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+DRM G +L Y + LC ++ A + M+A E + Y ++ L
Sbjct: 213 VDRMVQRGCQPNL--VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 240 GAHNRVDKANALFHEAQSRGL 260
+ D A LF E +++G+
Sbjct: 271 CKYRHEDDALNLFTEMENKGV 291
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 31/244 (12%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +++ +G AE++ ++ R I PD LI G+C+ +L+EA+ + M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 72 YRGGFELGVVAYNAMLDCVC---------ELCRQKD-----------PFLLHS------- 104
VV YN +++ C EL R+ L+H
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 105 -EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
A+ V +M GV N+ T+N L+ LCK K E A+ +F + P T+ ++
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I + +A ++E+G ++ + G D Y ++ C E A +F M+ D
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKP--DVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Query: 224 GCEP 227
G P
Sbjct: 570 GPLP 573
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P+ + L+ G C +GKLE+A + + R E + YN M++ +C+ + +D +
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
+ + +GV +V +N +I+ C+ E+A LF +M E G P+ T
Sbjct: 526 -------DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 12/250 (4%)
Query: 12 GSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++++ LC G E +++ + + PD ++L GWC ++A +L EM
Sbjct: 235 NAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV---ETFNVL 128
G + Y A +D C+ + EA + M +G + +TF ++
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAG-------MVDEAADLFDFMITKGSAVSAPTAKTFALM 347
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I L K K E+ +L RM GC P+ +T+ +I + A +++E + +D M + G+
Sbjct: 348 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
D Y FL +LC + + ALK++ M C P ++TY++L+S + D A
Sbjct: 408 PP--DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 249 NALFHEAQSR 258
+ E R
Sbjct: 466 FNTWTEMDKR 475
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 9/181 (4%)
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
+ A+N +LD +C+ L E E +L M +R P + TFNVL C++R +
Sbjct: 234 INAFNMLLDALCKCG-------LVKEGEALLRRMRHRVKP-DANTFNVLFFGWCRVRDPK 285
Query: 140 DALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASL-DKKAYY 198
A+KL M E G P T+ I + QA ++E ++ D M + G S K +
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ L ++ E ++ M + GC P + TY ++ + +VD+A E ++
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 259 G 259
G
Sbjct: 406 G 406
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G K + + ++ C G A + M+ + V P ++I + K
Sbjct: 298 GHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKA 357
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
EE L G M G V Y +++ +C + + D EA K L EM +G P +
Sbjct: 358 EECFELIGRMISTGCLPDVSTYKDVIEGMC-MAEKVD------EAYKFLDEMSNKGYPPD 410
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
+ T+N + LC+ RKT++ALKL+ RM E C P+ T+ +LI ++
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFE 458
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
PD + +I+G C+ K++EA + EM G+ +V YN L +CE R+ D
Sbjct: 373 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCE-NRKTD--- 428
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
EA K+ M +V+T+N+LI+ ++ + A + M + C + T+
Sbjct: 429 ---EALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYC 485
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
+I L+ R +E +++ + + G L + + FL L + ++ KV MK
Sbjct: 486 AMINGLFDCHRAKEACFLLEEVVNKGL--KLPYRVFDSFLMRLSEVGNLKAIHKVSEHMK 543
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 9/228 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL-GVVAYNAMLDCVCELCRQKDPFL 101
P+ + ++L+K C +G + A + EM R G + Y+ ++DC+ R K+
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
L + + G+ + TFNV+I C+ + E A K+ M + GC PN +
Sbjct: 254 LFEDM------ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYS 307
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
L+ + +++E + D +K G LD Y + C + A+K+ MK
Sbjct: 308 ALMNGFCKVGKIQEAKQTFDEVKKTGL--KLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
A C TY++++ L + R ++A + + S G+ + Y +
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 413
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD +++I G+C G++E A+++ M + G V Y+A+++ C++ + +
Sbjct: 264 ISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ--- 320
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
EA++ E+ G+ + + L+ C+ +T++A+KL M C + T+
Sbjct: 321 ----EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTY 376
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
V++R L R EE +M+D+ S G L+K +Y L LC +E A+K ++M
Sbjct: 377 NVILRGLSSEGRSEEALQMLDQWGSE--GVHLNKGSYRIILNALCCNGELEKAVKFLSVM 434
Query: 221 KADGCEPGIKTYDLLMSKL 239
G P T++ L+ +L
Sbjct: 435 SERGIWPHHATWNELVVRL 453
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 9/267 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
+ Y K ++ +++ L A+ + L P+ +L+ GWC L
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
EA R+ +M G + +VA+N ML+ + R+K S+A K+ M +G NV
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLR-SRKK------SDAIKLFHVMKSKGPCPNV 368
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
++ ++I + CK E A++ F M + G P+ + LI +L+ E++
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M+ G D K Y + ++ + EHA +++ M + EP I T++++M
Sbjct: 429 MQEKGHPP--DGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
+ A++ E +G+ Y V
Sbjct: 487 RNYEMGRAVWEEMIKKGICPDDNSYTV 513
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 12/175 (6%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
S +++ C + A D+ + PD A+ LI G+ KL+ L EM
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G YNA++ + QK P A ++ +M + ++ TFN+++ +
Sbjct: 430 QEKGHPPDGKTYNALIKL---MANQKMP----EHATRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG----DEMIDR 182
R E ++ M + G P++ ++ VLIR L + E +EM+D+
Sbjct: 483 YFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDK 537
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 46/292 (15%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEE 63
+G + D +++ LC G A ++ +D+ R+ FP + L+ GWC GK+ E
Sbjct: 212 FGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMME 270
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A+ + +M GFE +V Y +L + D + L L +M RG N
Sbjct: 271 AKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDL-------LRDMRRRGFEPNAN 323
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMG-------------------EWG----CY------ 154
+ VLI LCK+ + E+A+K+F M +WG CY
Sbjct: 324 CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDM 383
Query: 155 ------PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
P+E T++ ++ + + EE E++++M+ + D Y + + C +
Sbjct: 384 IKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP--DIGIYNVVIRLACKLG 441
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
V+ A++++ M+ +G PG+ T+ ++++ L + + +A+ F E +RGL
Sbjct: 442 EVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 111/237 (46%), Gaps = 12/237 (5%)
Query: 31 ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV 90
E M K+ ++I P+ + +L++ + +++A + EM + GFE + +LD +
Sbjct: 171 EEMRKENPQLIEPE--LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDAL 228
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
C+ KD A K+ +M R P N+ F L+ C++ K +A + +M E
Sbjct: 229 CKHGSVKD-------AAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNE 280
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV 210
G P+ + L+ A ++ + +++ M+ GF + + Y + LC ++R+
Sbjct: 281 AGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN--CYTVLIQALCKVDRM 338
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
E A+KVF M+ CE + TY L+S ++DK + + +GL + Y
Sbjct: 339 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTY 395
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 30/237 (12%)
Query: 33 MVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVC 91
+++D+ R F A C +LI+ C ++EEA ++ EM R E VV Y A++ C
Sbjct: 309 LLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Query: 92 ELCRQKDPFLL----------------------HSEAEKVLVEMDYRGVPRNVE------ 123
+ + +++ H + E ++ R +E
Sbjct: 369 KWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIG 428
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+NV+I CK+ + ++A++L++ M E G P TFV++I L L E + M
Sbjct: 429 IYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEM 488
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLMSKL 239
+ G + L + +++E A V++ + + G CE + ++ + + L
Sbjct: 489 VTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHAL 545
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 121/300 (40%), Gaps = 46/300 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GLK + S +V+ C +G A + D+ RV + P+E LI C G L +A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
RL EM + G E VV Y A++D +C+ R K EAE++ +MD GV N+ +
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK-------EAEELFGKMDTAGVIPNLAS 474
Query: 125 FNVLIT-----------------------------------NLCKIRKTEDALKLFHRMG 149
+N LI LC + K E A + + M
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 150 EWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER 209
E G N + L+ + +++ EG ++D MK ++ + + LC +
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV--VTFCVLIDGLCKNKL 592
Query: 210 VEHALKVFAMMKAD-GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
V A+ F + D G + + ++ L N+V+ A LF + +GL Y
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 114/249 (45%), Gaps = 10/249 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++++ +C +G A + +++ R + PD + +I G+ G+L++ EM
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
E V+ YNA+++C C+ K P L + EM G+ NV +++ L+
Sbjct: 324 KDMCCEPDVITYNALINCFCKF--GKLPIGL-----EFYREMKGNGLKPNVVSYSTLVDA 376
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
CK + A+K + M G PNE T+ LI + + L + + + M G
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV--GVE 434
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ Y + LC ER++ A ++F M G P + +Y+ L+ +D+A L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 252 FHEAQSRGL 260
+E + RG+
Sbjct: 495 LNELKGRGI 503
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 9/227 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + LI +C GKL EM G + VV+Y+ ++D C+ +
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG-------M 382
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A K V+M G+ N T+ LI CKI DA +L + M + G N T+
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L A R++E +E+ +M +AG +L +Y + + ++ AL++ +K
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNL--ASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G +P + Y + L + +++ A + +E + G+ Y
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 9/196 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+FP C+ L+ + GK ++ +R +M G V YN M+DC +C++ D
Sbjct: 223 VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC---MCKEGDV- 278
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
A + EM +RG+ + T+N +I K+ + +D + F M + C P+ T+
Sbjct: 279 ---EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI + +L G E MK G ++ +Y + C ++ A+K + M
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNV--VSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 221 KADGCEPGIKTYDLLM 236
+ G P TY L+
Sbjct: 394 RRVGLVPNEYTYTSLI 409
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 10/224 (4%)
Query: 38 ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQK 97
R I PD + I G C K+E A+ + EM G + + Y ++D +
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD---AYFKSG 556
Query: 98 DPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-GEWGCYPN 156
+P +E +L EM + V TF VLI LCK + A+ F+R+ ++G N
Sbjct: 557 NP----TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
F +I L + ++E + ++M G D+ AY + V AL +
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP--DRTAYTSLMDGNFKQGNVLEALAL 670
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
M G + + Y L+ L N++ KA + E G+
Sbjct: 671 RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 10/264 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + +++ +C G AE ++ ++ ++ + + + + LI G+C G ++EA
Sbjct: 359 GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ M + GF+ V N + C L R + EA++ L M GV + +
Sbjct: 419 SMIYDVMEQKGFQADVFTCNTIASCFNRLKR-------YDEAKQWLFRMMEGGVKLSTVS 471
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ LI CK E+A +LF M G PN T+ V+I + + +++E ++ M+
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ G D Y + C + V+ A+++F+ M G + TY +++S L +
Sbjct: 532 ANGMDP--DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 589
Query: 245 VDKANALFHEAQSRGLAVTPKEYA 268
D+A L+ E + +G + K Y
Sbjct: 590 SDEAFGLYDEMKRKGYTIDNKVYT 613
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 10/268 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKL 61
R+ G++ D ++ C KG A + +L + + P LI G C G++
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
A L EM G + V +N ++D CR+ + EA + M+ +G +
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDG---YCRKG----MVDEASMIYDVMEQKGFQAD 433
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T N + + ++++ ++A + RM E G + ++ LI + +EE +
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M S G + Y + C +++ A K+ A M+A+G +P TY L+
Sbjct: 494 EMSSKGVQP--NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ VD+A LF E +GL Y V
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 113/266 (42%), Gaps = 10/266 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLE 62
D G+K SL +VVE LC +G +++++K+ + + I P+ + +I +
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS 276
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+ M + G V Y +++ + + D AEK+ EM RG+ +V
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD-------AEKLFDEMRERGIESDV 329
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
+ LI+ C+ + A LF + E G P+ T+ LI + + + + +++
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M+S G ++ + + + C V+ A ++ +M+ G + + T + + S
Sbjct: 390 MQSK--GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYA 268
R D+A G+ ++ Y
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYT 473
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 28 SYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAML 87
S+ + M+K R I PD A ++LI C +G E++ L +M + G+ +V YN +L
Sbjct: 219 SFLKEMLK---RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275
Query: 88 DCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHR 147
C+ R K A ++L M +GV +V T+N+LI +LC+ + L
Sbjct: 276 HWYCKKGRFK-------AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328
Query: 148 MGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI 207
M + +PNE T+ LI ++ ++++ M S FG S + + +
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS--FGLSPNHVTFNALIDGHISE 386
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+ ALK+F MM+A G P +Y +L+ L + D A + + G+ V Y
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446
Query: 268 A 268
Sbjct: 447 T 447
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 105/253 (41%), Gaps = 12/253 (4%)
Query: 17 VVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+++ LC GF A ++ ++++ I PD LI G+C G+ + A+ + +YR G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
+ Y+ ++ C + K EA ++ M G R+ TFNVL+T+LCK
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLK-------EAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 561
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
K +A + M G PN +F LI + + + D M G +
Sbjct: 562 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF--F 619
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
Y L LC + A K + A Y+ L++ + + KA +LF E
Sbjct: 620 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Query: 256 QSRGLAVTPKEYA 268
R ++ P Y
Sbjct: 680 VQR--SILPDSYT 690
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 9/238 (3%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
G +S+ + R+ + ++ D+LI+ + +G ++++ + M GF V
Sbjct: 142 SGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 201
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
NA+L V + + L EM R + +V TFN+LI LC E +
Sbjct: 202 NAILGSVVKSGEDVSVW-------SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 254
Query: 144 LFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI 203
L +M + G P T+ ++ + R + E++D MKS G A D Y +
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA--DVCTYNMLIHD 312
Query: 204 LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
LC R+ + M+ P TY+ L++ +V A+ L +E S GL+
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 11/260 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G++ DR + +++ K C+ G ++A +VK + + I D+ CD ++ + + +E+
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R + EM + G Y +++ +C + K F++ E + ++ P NV
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM------IAHKICPPNVAE 972
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ ++ L K K ++A L M + P +F L+ + + E E+ R+
Sbjct: 973 -SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL--RVV 1029
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA-HN 243
+ G LD +Y +T LC + A +++ MK DG TY L+ L A
Sbjct: 1030 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARET 1089
Query: 244 RVDKANALFHEAQSRGLAVT 263
A+ + + +RG +
Sbjct: 1090 AFSGADIILKDLLARGFITS 1109
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
G RD + V+V LC G + AE ++ + I P+ D LI G+ G+ +A
Sbjct: 543 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 602
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ EM + G Y ++L +C+ + EAEK L + VP V+T
Sbjct: 603 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR-------EAEKFLKSL--HAVPAAVDT 653
Query: 125 --FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
+N L+T +CK A+ LF M + P+ T+ LI L
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 104/276 (37%), Gaps = 32/276 (11%)
Query: 17 VVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+++ LC G AE+ +K L V D M + L+ C G L +A L GEM +
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAE--------KVLV---------------- 111
Y +++ +C + L EAE KV+
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 743
Query: 112 -----EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
+MD G ++ T N +I ++ K E L MG PN TT+ +L+
Sbjct: 744 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 803
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
+ R + + G DK + + +C +E LK+ G E
Sbjct: 804 --YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVE 861
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
T+++L+SK A+ ++ A L S G+++
Sbjct: 862 VDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL 897
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
Query: 16 VVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
+++E +G A +++ + L+R + PD + +I+G C +G ++ A + +
Sbjct: 233 ILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK 292
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
G E V++YN +L + + + E EK++ +M NV T+++LIT LC+
Sbjct: 293 GCEPDVISYNILLRALLNQGKWE-------EGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
K E+A+ L M E G P+ ++ LI + + RL+ E ++ M S G D
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD--GCLPDI 403
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
Y L LC + + AL++F + GC P +Y+ + S L + +A + E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 255 AQSRGL 260
S G+
Sbjct: 464 MMSNGI 469
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 123/266 (46%), Gaps = 10/266 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKL 61
R D + +++ LCS+G A +++ L + P +LI+ ++G +
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+EA +L EM G + + YN ++ +C+ F +++ ++ +G +
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF-------EMVRNLELKGCEPD 297
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V ++N+L+ L K E+ KL +M C PN T+ +LI +L + ++EE ++
Sbjct: 298 VISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
MK G + D +Y + C R++ A++ M +DGC P I Y+ +++ L
Sbjct: 358 LMKEKGL--TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEY 267
+ + D+A +F + G + Y
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSY 441
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 125/293 (42%), Gaps = 31/293 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GLK D + ++ +C +G A MV++L + PD ++L++ GK EE
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC------------ELCRQK---------DPFLLH 103
+L +M+ + VV Y+ ++ +C +L ++K DP +
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 104 -------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
A + L M G ++ +N ++ LCK K + AL++F ++GE GC PN
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
+++ + +L+ + MI M S G D+ Y ++ LC V+ A ++
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP--DEITYNSMISCLCREGMVDEAFEL 495
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M++ P + TY++++ +R++ A + G Y V
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 548
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 129/297 (43%), Gaps = 45/297 (15%)
Query: 9 RDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRL 67
RD LK+ + C G + +++ + R + PD +C LIKG+ + +A R+
Sbjct: 88 RDTQMLKIF-HRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV 146
Query: 68 AGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNV 127
+ + G + V AYNA+++ C++ R D A +VL M + + T+N+
Sbjct: 147 MEILEKFG-QPDVFAYNALINGFCKMNRIDD-------ATRVLDRMRSKDFSPDTVTYNI 198
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
+I +LC K + ALK+ +++ C P T+ +LI + ++E +++D M S G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 188 F---------------------------------GASLDKKAYYQFLTILCGIERVEHAL 214
G D +Y L L + E
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 215 KVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDP 271
K+ M ++ C+P + TY +L++ L ++++A L + +GL TP Y+ DP
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL--TPDAYSYDP 373
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
V+ LC G A A + L V P+ + + + G A + EM
Sbjct: 407 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS 466
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
G + + YN+M+ C LCR+ + EA ++LV+M +V T+N+++ C
Sbjct: 467 NGIDPDEITYNSMISC---LCREG----MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL----YQAARLEEGDEMI 180
K + EDA+ + M GC PNETT+ VLI + Y+A +E ++++
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 9/267 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
+ Y K ++ +++ L A+ + L P+ +L+ GWC L
Sbjct: 255 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 314
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
EA R+ +M G + +VA+N ML+ + ++ D A K+ M +G NV
Sbjct: 315 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD-------AIKLFHVMKSKGPCPNV 367
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
++ ++I + CK E A++ F M + G P+ + LI +L+ E++
Sbjct: 368 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 427
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M+ G D K Y + ++ + EH +++ M + EP I T++++M
Sbjct: 428 MQEKGHPP--DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 485
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
+ A++ E +G+ Y V
Sbjct: 486 RNYEMGRAVWDEMIKKGICPDDNSYTV 512
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 9/267 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
+ Y K ++ +++ L A+ + L P+ +L+ GWC L
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
EA R+ +M G + +VA+N ML+ + ++ D A K+ M +G NV
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD-------AIKLFHVMKSKGPCPNV 368
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
++ ++I + CK E A++ F M + G P+ + LI +L+ E++
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M+ G D K Y + ++ + EH +++ M + EP I T++++M
Sbjct: 429 MQEKGHPP--DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 486
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
+ A++ E +G+ Y V
Sbjct: 487 RNYEMGRAVWDEMIKKGICPDDNSYTV 513
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 10/258 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKL 61
++ G++ + ++ L S F AER+ + + + I PD + +IKG+C G+
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQT 273
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
++A +M G E + Y M+ + C F + EMD +G+
Sbjct: 274 QKAMEKLRDMETRGHEADKITYMTMI----QACYADSDF---GSCVALYQEMDEKGIQVP 326
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
F+++I LCK K + +F M G PN + VLI ++ +E+ ++
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
RM GF D Y + LC RVE AL F + DG Y L+ LG
Sbjct: 387 RMIDEGFKP--DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444
Query: 242 HNRVDKANALFHEAQSRG 259
RVD+A LF E +G
Sbjct: 445 AGRVDEAERLFEEMSEKG 462
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 10/215 (4%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
++I G C +GKL E + M R G + V Y ++D + +D A ++
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVED-------AIRL 384
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
L M G +V T++V++ LCK + E+AL FH G N + LI L +
Sbjct: 385 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD-GCEPG 228
A R++E + + + M G + D Y + +V+ A+ +F M+ + GC+
Sbjct: 445 AGRVDEAERLFEEMSEKG--CTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
+ TY +L+S + +R ++A L+ +G+ T
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 105/255 (41%), Gaps = 16/255 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDM----LIKGWCVDG 59
D G K D + VVV LC G E + F A+ M LI G G
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNG---RVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 446
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+++EA RL EM G YNA++D + + + L E + G
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME------EEEGCD 500
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+ V T+ +L++ + K + E+ALKL+ M + G P F L L + ++ ++
Sbjct: 501 QTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKI 560
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+D + A G LD A + LC R++ A K+ + G E + ++++ L
Sbjct: 561 LDEL--APMGVILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINAL 617
Query: 240 GAHNRVDKANALFHE 254
+ D A L H
Sbjct: 618 RKVGKADLAMKLMHS 632
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 88/221 (39%), Gaps = 9/221 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ LIK + G +EE + +M G E + YN +++ + + AE+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSA-------MFVDSAER 243
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
V M+ + ++ T+N +I CK +T+ A++ M G ++ T++ +I++ Y
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ + M G + A+ + LC ++ VF M G +P
Sbjct: 304 ADSDFGSCVALYQEMDEKGI--QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPN 361
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ Y +L+ V+ A L H G Y+V
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQ 96
L + I P+ +LIKG C DG++ EA + G++ + G E +V Y++++D C+
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 97 KDPFLLHSE----------------------------AEKVLVEMDYRGVPRNVETFNVL 128
+ F L+ + A + V+M + + NV FN L
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I C++ + ++ALK+F MG +G P+ TF ++R RLEE + RM G
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
D AY + C + L++F +M+ + I ++++ L +R++ A
Sbjct: 563 EP--DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 249 NALFHE 254
+ F+
Sbjct: 621 SKFFNN 626
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 44/229 (19%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I D A+C+++I ++E+A + + G E +V YN M+ C L R
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL---- 652
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
EAE++ + N T +LI LCK + A+++F M E G PN T+
Sbjct: 653 ---DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
L+ F S+D +E + K+F M
Sbjct: 710 GCLMD---------------------WFSKSVD----------------IEGSFKLFEEM 732
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ G P I +Y +++ L RVD+A +FH+A L YA+
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 781
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 108/278 (38%), Gaps = 41/278 (14%)
Query: 17 VVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
++ C +G A + K + R I PD LI G+ G L +L + G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
+L VV +++ +D + D + A V M +G+ NV T+ +LI LC+
Sbjct: 352 VKLDVVVFSSTIDV---YVKSGD----LATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF------- 188
+ +A ++ ++ + G P+ T+ LI + L G + + M G+
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 189 ------------------------GAS--LDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
G S L+ + + C + R + ALKVF +M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
G +P + T+ +M R+++A LF GL
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 30 AERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
AER+ + L F P+ +LI C + ++ A R+ M G + V Y ++D
Sbjct: 655 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+ + F K+ EM +G+ ++ +++++I LCK + ++A +FH+
Sbjct: 715 WFSKSVDIEGSF-------KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
+ P+ + +LIR + RL E + + M G
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 10/194 (5%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
GF +G+V+ N +L + D + S ++++ G NV TF LI CK
Sbjct: 247 GFRVGIVSCNKVLKGL-----SVDQIEVASRLLSLVLDC---GPAPNVVTFCTLINGFCK 298
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+ + A LF M + G P+ + LI ++A L G ++ + G LD
Sbjct: 299 RGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG--VKLDV 356
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+ + + + A V+ M G P + TY +L+ L R+ +A ++ +
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 255 AQSRGLAVTPKEYA 268
RG+ + Y+
Sbjct: 417 ILKRGMEPSIVTYS 430
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 12/239 (5%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGK 60
ME+ YG+K D ++ +++ L + +A + L I PD ++LI G+C K
Sbjct: 229 MEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARK 288
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
++AR + M F VV Y + ++ C++ D ++L EM G
Sbjct: 289 FDDARAMMDLMKVTEFTPDVVTYTSFVEA---YCKEGD----FRRVNEMLEEMRENGCNP 341
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
NV T+ +++ +L K ++ +AL ++ +M E GC P+ + LI L + R ++ E+
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM---KADGCEPGIKTYDLLM 236
+ M + G D Y ++ R E AL++ M + + C P ++TY L+
Sbjct: 402 EDMTNQ--GVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 87 LDCVCELCRQKDPFLLHSEAEKVLVEMDYR-GVPRNVETFNVLITNLCKIRKTEDALKLF 145
LD + ++ R+ +++A +EM+ GV + N L+ L K E A ++F
Sbjct: 203 LDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF 262
Query: 146 HRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILC 205
++ + P+ TF +LI +A + ++ M+D MK F D Y F+ C
Sbjct: 263 LKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTP--DVVTYTSFVEAYC 319
Query: 206 GIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
++ M+ +GC P + TY ++M LG +V +A ++ + + G K
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK 379
Query: 266 EYA 268
Y+
Sbjct: 380 FYS 382
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 14/265 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
G + D + ++ LC +G A +V R++ +I G C G E A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVD---RMVEEGHQPYGTIINGLCKMGDTESAL 61
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
L +M + VV YNA++D +C KD +H A+ + EM +G+ +V T+
Sbjct: 62 NLLSKMEETHIKAHVVIYNAIIDRLC-----KDGHHIH--AQNLFTEMHDKGIFPDVITY 114
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI-DRMK 184
+ +I + C+ + DA +L M E P+ TF LI +L + ++ E +E+ D ++
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
F ++ Y + C +R+ A ++ M + C P + T+ L++ R
Sbjct: 175 RGIFPTTI---TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
VD +F E RG+ Y
Sbjct: 232 VDNGMEIFCEMHRRGIVANTVTYTT 256
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 111/243 (45%), Gaps = 10/243 (4%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
++++LC G +A+ + ++ + IFPD +I +C G+ +A +L +M
Sbjct: 80 NAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
VV ++A+++ + + + SEAE++ +M RG+ T+N +I C
Sbjct: 140 RQINPDVVTFSALINALVKEGKV-------SEAEEIYGDMLRRGIFPTTITYNSMIDGFC 192
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
K + DA ++ M C P+ TF LI +A R++ G E+ M G A +
Sbjct: 193 KQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA--N 250
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y + C + ++ A + +M + G P T+ +++ L + + KA A+
Sbjct: 251 TVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILE 310
Query: 254 EAQ 256
+ Q
Sbjct: 311 DLQ 313
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 10/247 (4%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
++ LC G A ++ + I + + +I C DG A+ L EM+
Sbjct: 46 TIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK 105
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
G V+ Y+ M+D C R D AE++L +M R + +V TF+ LI L K
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTD-------AEQLLRDMIERQINPDVVTFSALINALVK 158
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
K +A +++ M G +P T+ +I + RL + M+D M S S D
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS--CSPDV 216
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+ + C +RV++ +++F M G TY L+ +D A L +
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276
Query: 255 AQSRGLA 261
S G+A
Sbjct: 277 MISSGVA 283
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 30/215 (13%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKL 61
D G+ D + +++ C G + AE++++D+ R I PD LI +GK+
Sbjct: 103 HDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKV 162
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP-FLLHSEAEK------------ 108
EA + G+M R G + YN+M+D C+ R D +L S A K
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 109 ---------------VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGC 153
+ EM RG+ N T+ LI C++ + A L + M G
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 154 YPNETTFVVLIRSLYQAARLEEGDEMI-DRMKSAG 187
PN TF ++ SL L + ++ D KS G
Sbjct: 283 APNYITFQSMLASLCSKKELRKAFAILEDLQKSEG 317
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 9/221 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I D + ++ C DG A+ L EM+ G V+ YN M+D C R
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRW---- 61
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
S+A+++L M + + ++ TF+ LI K RK +A +++ M W +P T+
Sbjct: 62 ---SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+I + R+++ M+D M S G S D + + C +RV++ +++F M
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKG--CSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 176
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
G TY L+ +D A L +E S G+A
Sbjct: 177 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 10/251 (3%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
+K D +V++LC G A+ + ++ + IFP+ + +I +C G+ +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
+L M +V ++A+++ +++ SEAE++ EM + T+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALIN---AFVKERKV----SEAEEIYKEMLRWSIFPTTITY 118
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N +I CK + +DA ++ M GC P+ TF LI +A R++ G E+ M
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
G A + Y + C + ++ A + M + G P T+ +++ L + +
Sbjct: 179 RGIVA--NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 236
Query: 246 DKANALFHEAQ 256
KA A+ + Q
Sbjct: 237 RKAFAILEDLQ 247
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 11/200 (5%)
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M + + VV A++D LC+ + H A+ + EM +G+ NV T+N +I
Sbjct: 1 MGQSHIKADVVISTAIVD---RLCKDGN----HINAQNLFTEMHEKGIFPNVLTYNCMID 53
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM-KSAGFG 189
+ C + DA +L M E P+ TF LI + + ++ E +E+ M + + F
Sbjct: 54 SFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP 113
Query: 190 ASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
++ Y + C +RV+ A ++ M + GC P + T+ L++ RVD
Sbjct: 114 TTI---TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 170
Query: 250 ALFHEAQSRGLAVTPKEYAV 269
+F E RG+ Y
Sbjct: 171 EIFCEMHRRGIVANTVTYTT 190
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 27 ASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNA 85
S AE + K++ R IFP + +I G+C ++++A+R+ M G VV ++
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 86 MLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLF 145
+++ C+ R + ++ EM RG+ N T+ LI C++ + A L
Sbjct: 156 LINGYCKAKRVDNGM-------EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 146 HRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSA 186
+ M G P+ TF ++ L L + +++ ++ +
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 9/227 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P+ + ++ G+C G +EEA + ++ G + Y ++ + C++KD
Sbjct: 214 VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL---IMGYCQRKD-- 268
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
A KV EM +G RN + LI LC R+ ++A+ LF +M + C+P T+
Sbjct: 269 --LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
VLI+SL + R E ++ M+ G ++ Y + LC + E A ++ M
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNI--HTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
G P + TY+ L++ ++ A + +SR L+ + Y
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 96/233 (41%), Gaps = 21/233 (9%)
Query: 35 KDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELC 94
K L R + PD + LI G C G + A RL M G Y +M+D +C+
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 95 RQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCY 154
R + EA + ++ +GV NV + LI CK K ++A + +M C
Sbjct: 512 RVE-------EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 155 PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV---- 210
PN TF LI L +L+E + ++M G ++ TIL I R+
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD------TIL--IHRLLKDG 616
Query: 211 --EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+HA F M + G +P TY + R+ A + + + G++
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
FEL Y ++ C L F L E ++V +EM V N+ T+N ++ CK+
Sbjct: 175 FEL---KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL 231
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
E+A + ++ E G P+ T+ LI Q L+ ++ + M G ++
Sbjct: 232 GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG--CRRNEV 289
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
AY + LC R++ A+ +F MK D C P ++TY +L+ L R +A L E
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 256 QSRGLAVTPKEYAV 269
+ G+ Y V
Sbjct: 350 EETGIKPNIHTYTV 363
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 13/266 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + + ++ C +G A +V+ + +R + P+ + LIKG+C + +A
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKA 446
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ +M VV YN+++D CR + A ++L M+ RG+ + T
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLID---GQCRSGN----FDSAYRLLSLMNDRGLVPDQWT 499
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +I +LCK ++ E+A LF + + G PN + LI +A +++E M+++M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 185 SAG-FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
S SL + + LC +++ A + M G +P + T +L+ +L
Sbjct: 560 SKNCLPNSL---TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 244 RVDKANALFHEAQSRGLAVTPKEYAV 269
D A + F + S G Y
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTT 642
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 10/219 (4%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
FP +LIK C + EA L EM G + + Y ++D +C C+
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK------ 373
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
+A ++L +M +G+ NV T+N LI CK EDA+ + M PN T+
Sbjct: 374 -FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYN 432
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
LI+ Y + + + ++++M D Y + C + A ++ ++M
Sbjct: 433 ELIKG-YCKSNVHKAMGVLNKMLERKVLP--DVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
G P TY ++ L RV++A LF + +G+
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 116/285 (40%), Gaps = 57/285 (20%)
Query: 17 VVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR-- 73
+++ C G A M+ K L++ P+ + LI G C DGKL+EA L +M +
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 74 ------------------GGFELGVVAYNAMLDC------------VCELCRQKDPFLLH 103
G F+ + ML + CR+
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL--- 654
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+AE ++ +M GV ++ T++ LI + +T A + RM + GC P++ TF+ L
Sbjct: 655 -DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 164 IRSLYQ---------------AARLEEGDEMIDRM-KSAGFGASLDKKAYYQFLTILCGI 207
I+ L + + + E D +++ + K + + K+Y + + +C +
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 208 ERVEHALKVF-AMMKADGCEPGIKTYDLLMS---KLGAHNRVDKA 248
+ A KVF M + +G P ++ L+S KL HN K
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 26 FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG-GFELGVVAYN 84
F + E + K + + P+ + LI G C G L A ++ M R G + +N
Sbjct: 741 FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFN 800
Query: 85 AMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKL 144
A+L C C+L + H+EA KV+ +M G +E+ VLI L K + E +
Sbjct: 801 ALLSCCCKLKK-------HNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSV 853
Query: 145 FHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
F + + G Y +E + ++I + + +E E+ + M+ G
Sbjct: 854 FQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 115/227 (50%), Gaps = 9/227 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
++ + D + +V+ KG + A+ ++K++ V ++PD +I G+C GK++
Sbjct: 158 EFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKID 217
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG-VPRN 121
+A RLA EM + L V Y+ +L+ VC+ + L +E EK D G + N
Sbjct: 218 DAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEK----EDGGGLISPN 273
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR-LEEGDEMI 180
T+ ++I C+ R+ E+AL + RMG GC PN T VLI+ + + ++ ++I
Sbjct: 274 AVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLI 333
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEP 227
D++ G G SL + + L ++R E A K+F +M G P
Sbjct: 334 DKLVKLG-GVSL-SECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRP 378
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
A+ ++ EMD G+ +V T+ +I C K +DA +L M + C N T+ ++
Sbjct: 184 ADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILE 243
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI--LCGIERVEHALKVFAMMKAD 223
+ ++ +E E++ M+ G + A L I C RVE AL V M
Sbjct: 244 GVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNR 303
Query: 224 GCEPG 228
GC P
Sbjct: 304 GCMPN 308
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 116/284 (40%), Gaps = 31/284 (10%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
Y L + + ++ LC A+ + +++ PD +L++GW + L +A
Sbjct: 197 YDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKA 256
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE---------LCRQKDP-----------FLLHS 104
R + EM G +V Y+ M+D +C+ + R DP L+H+
Sbjct: 257 REVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHT 316
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
EA +EM+ G+ +V FN LI CK + ++ ++ M G PN
Sbjct: 317 YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 376
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
+ +++R L + E DE D + D Y + + C + +E A KV
Sbjct: 377 SKSCNIILRHLIERG---EKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKV 433
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ M+ G P + T+ +L++ L KA L E G+
Sbjct: 434 WKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
M+ +P N+ FN L++ LCK + A ++F M + P+ T+ +L+ +
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPN 252
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
L + E+ M A G D Y + ILC RV+ AL + M C+P Y
Sbjct: 253 LPKAREVFREMIDA--GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 233 DLLMSKLGAHNRVDKANALFHEAQSRGL 260
+L+ G NR+++A F E + G+
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGM 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 15/221 (6%)
Query: 45 EAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS 104
E C ++++ + K++EA M + +VA+N +L LC+ K+
Sbjct: 169 ETFC-IVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSA---LCKSKNV----R 220
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
+A++V M R P + +T+++L+ K A ++F M + GC+P+ T+ +++
Sbjct: 221 KAQEVFENMRDRFTP-DSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMV 279
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE-RVEHALKVFAMMKAD 223
L +A R++E ++ M + + Y L G E R+E A+ F M+
Sbjct: 280 DILCKAGRVDEALGIVRSMDPSICKPT---TFIYSVLVHTYGTENRLEEAVDTFLEMERS 336
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
G + + ++ L+ NR+ + E +S+G VTP
Sbjct: 337 GMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKG--VTP 375
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDG 59
MER G+K D ++ C R++K++ ++ + P+ C+++++ G
Sbjct: 333 MERS-GMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 391
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ +EA + +M + E Y ++ CE +K+ A+KV M +GV
Sbjct: 392 EKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCE---KKE----METADKVWKYMRKKGVF 443
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
++ TF+VLI LC+ R T+ A L M E G P+ TF
Sbjct: 444 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 33/294 (11%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
D G+ S ++++ LC G S A+ +V + R + PD L+ G+C GK++
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
A+ L EM R N +L + ++ R SEAE++L +M+ +G +
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI-------SEAEELLRKMNEKGYGLDT 466
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRM--------GEWG---------------CYPNETT 159
T N+++ LC + + A+++ M G G C P+ T
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLIT 526
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
+ L+ L +A R E + M G D AY F+ C ++ A +V
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEM--MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDPRY 273
M+ GC ++TY+ L+ LG N++ + + L E + +G++ Y +Y
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 119/252 (47%), Gaps = 10/252 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G K + + ++V C G ++ + + P++ + + ++ +C +G+ +++
Sbjct: 177 GCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDS 236
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMD-YRGVPR-NV 122
++ +M G +V +N+ + +C+ + D + S+ +E+D Y G+PR N
Sbjct: 237 EKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSD-----MELDEYLGLPRPNS 291
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N+++ CK+ EDA LF + E + ++ + ++ L + + E + ++ +
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQ 351
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M G G S+ +Y + LC + + A + +MK +G P TY L+ +
Sbjct: 352 MTDKGIGPSI--YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 243 NRVDKANALFHE 254
+VD A +L E
Sbjct: 410 GKVDAAKSLLQE 421
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
++ ++G GK EA + +M G + +YN ++D +C+L + S+A+
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG-------MLSDAKT 382
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
++ M GV + T+ L+ C + K + A L M C PN T +L+ SL+
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG---- 224
+ R+ E +E++ +M G+G LD + LCG ++ A+++ M+ G
Sbjct: 443 KMGRISEAEELLRKMNEKGYG--LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500
Query: 225 -------------------CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
C P + TY L++ L R +A LF E L
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV 560
Query: 266 EYAV 269
Y +
Sbjct: 561 AYNI 564
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G+ TFN+LI LC + A +LF M E GC PNE TF +L+R +A ++G
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
E+++ M+S FG +K Y ++ C R + + K+ M+ +G P I T++ +
Sbjct: 202 LELLNAMES--FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI 259
Query: 237 SKLGAHNRVDKANALFHEAQ 256
S L +V A+ +F + +
Sbjct: 260 SALCKEGKVLDASRIFSDME 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 11/256 (4%)
Query: 10 DRGSLKVVVEKLCSKG-FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D + ++ LC G FA + + + PD ++ I +C GK+ A R+
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
+M + G + YN++ + L + F +H ++ EM +G+ N+ T+N
Sbjct: 583 KDMEKKGCHKSLETYNSL---ILGLGIKNQIFEIHG----LMDEMKEKGISPNICTYNTA 635
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I LC+ K EDA L M + PN +F LI + + + E+ + S
Sbjct: 636 IQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-- 693
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
+ Y L ++ A ++ + G E G Y L+ L + ++ A
Sbjct: 694 -CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVA 752
Query: 249 NALFHEAQSRGLAVTP 264
+ + H+ RG P
Sbjct: 753 SGILHKMIDRGYGFDP 768
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 103/241 (42%), Gaps = 17/241 (7%)
Query: 37 LARVIFPDEA----MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCE 92
L R FP+ + ++L++ + ++E L +M G +N ++ +C+
Sbjct: 100 LVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD 159
Query: 93 LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG 152
A ++ EM +G N TF +L+ CK T+ L+L + M +G
Sbjct: 160 SS-------CVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFG 212
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
PN+ + ++ S + R ++ ++M+++M+ G D + ++ LC +V
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVP--DIVTFNSRISALCKEGKVLD 270
Query: 213 ALKVFAMMKADG----CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
A ++F+ M+ D P TY+L++ ++ A LF + + + Y
Sbjct: 271 ASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYN 330
Query: 269 V 269
+
Sbjct: 331 I 331
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 127/296 (42%), Gaps = 31/296 (10%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKL 61
R+ G K + S ++V+ C G A ++ ++ A + P+ + LI +C + ++
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH------------------ 103
EA + EM R G + V +N+++ +CE+ K L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 104 ----------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGC 153
EA K++ EM ++G P + T+N LI LC+ + + A LF +M G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 154 YPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHA 213
P+ + +LI L ++ +EE E M G++ D + + LC R+E
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLR--GSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 214 LKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
L +F ++A+G P T++ LMS L V A L E G + +++
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
H A V +M R +P + TF V++ C + + + AL L M + GC PN +
Sbjct: 198 HKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQT 257
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI SL + R+ E ++++ M G D + + + LC +R+ A K+ M
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFL--MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
G P TY LM+ L RVD A LF+
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 27/250 (10%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCR---QKDP 99
PD + +I G C ++ EA ++ M GF + Y +++ +C++ R KD
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 100 F-------------LLHS--------EAEKVLVEM-DYRGVPRNVETFNVLITNLCKIRK 137
F L+H +A+ VL +M G+ +V T+N LI K
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 138 TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAY 197
AL++ H M GC PN ++ +L+ + +++E +++ M + G + +
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP--NTVGF 462
Query: 198 YQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQS 257
++ C R+ A+++F M GC+P + T++ L+S L + + A L + S
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 258 RGLAVTPKEY 267
G+ Y
Sbjct: 523 EGVVANTVTY 532
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 16/254 (6%)
Query: 15 KVVVEKLCSKGFASY-----AERMVKDLARV--IFPDEAMCDMLIKGWCVDGKLEEARRL 67
++V+ GF ++ A+ ++ D+ I PD + LI G+ +G + A +
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 68 AGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNV 127
+M G + V +Y ++D C+L + EA VL EM G+ N FN
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKI-------DEAYNVLNEMSADGLKPNTVGFNC 464
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
LI+ CK + +A+++F M GC P+ TF LI L + ++ ++ M S G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
A + Y + ++ A K+ M G TY+ L+ L VDK
Sbjct: 525 VVA--NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 248 ANALFHEAQSRGLA 261
A +LF + G A
Sbjct: 583 ARSLFEKMLRDGHA 596
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 38/291 (13%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDG 59
M Y + S VV+E L S A + D L+R I P +++K +C
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+++ A L +M + G V Y ++ + + R +EA ++L EM G
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV-------NEALQLLEEMFLMGCV 284
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+ ETFN +I LCK + +A K+ +RM G P++ T+ L+ L + R++ ++
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 180 IDRMKSA----------GF---GASLDKKAY-------YQFLTILCGIERVEH------- 212
R+ GF G D KA Y + +C + +
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 213 ---ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
AL+V M+ GC+P + +Y +L+ ++D+A + +E + GL
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFA----SYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G D + +++ LC G S E+M++D P C++LI G C G +
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA---PSNISCNILINGLCRSGMV 615
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
EEA EM G +V +N++++ +C R +D + + + G+P +
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA-------EGIPPD 668
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE 174
TFN L++ LCK DA L E G PN T+ +L++S+ L+
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 12/267 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
D GL D S V+++ LC +G + A +++ + I PD +I +C GK +
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP-FLLHSEAEKVLVEMDYRGVPRN 121
A G M R G L V ++D VC++ + +D F+L + LV+M P
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET-----LVKMRILTTP-- 546
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+ NV++ L K K ++ L + ++ + G P+ T+ L+ L ++ + +++
Sbjct: 547 -HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILE 605
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
MK +G ++ Y + LC RVE A K+ + M+ G P TY +++
Sbjct: 606 LMKLSGCLPNV--YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYA 268
+ ++D+A RG + + Y+
Sbjct: 664 NGKLDRALETVRAMVERGYELNDRIYS 690
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
+ +V LC G+ AE + + ++ F D + L+ G+C L +A ++ M +
Sbjct: 199 RTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSK 258
Query: 74 G-GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNL 132
V+Y+ ++ +CE+ R ++ F L + M +G + T+ VLI L
Sbjct: 259 EVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQ-------MGEKGCQPSTRTYTVLIKAL 311
Query: 133 CKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM-KSAGFGAS 191
C + A LF M GC PN T+ VLI L + ++EE + + +M K F +
Sbjct: 312 CDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ Y + C RV A ++ +M+ C+P ++T++ LM L + KA L
Sbjct: 372 I---TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 252 FHEAQSRGLAVTPKEYAV 269
GL+ Y V
Sbjct: 429 LKRMLDNGLSPDIVSYNV 446
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 19/234 (8%)
Query: 1 MERDYGLKRDRG---------SLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDM 50
+E +GLK G + V+++ LC +G A + + + R P+ +
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LI G C DGK+EEA + +M + V+ YNA+++ C+ R F ++L
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF-------ELL 394
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M+ R NV TFN L+ LC++ K A+ L RM + G P+ ++ VLI L +
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
+ +++ M F D + + C + + A +M G
Sbjct: 455 GHMNTAYKLLSSMNC--FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M GF +G++ Y +++ +C+ + + S+ K+ G + L+
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKI-------GFVLDSHIGTSLLL 238
Query: 131 NLCKIRKTEDALKLFHRMG-EWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFG 189
C+ DALK+F M E C PN ++ +LI L + RLEE + D+M G
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 190 ASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
S + Y + LC ++ A +F M GC+P + TY +L+ L ++++AN
Sbjct: 299 PS--TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 250 AL 251
+
Sbjct: 357 GV 358
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ +LI G C G+LEEA L +M G + Y ++ +C+ L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG-------L 316
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A + EM RG NV T+ VLI LC+ K E+A + +M + +P+ T+
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + R+ E++ M+ ++ + + + + LC + + A+ + M
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNV--RTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
+G P I +Y++L+ L ++ A L
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 119/280 (42%), Gaps = 40/280 (14%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA--RVIFPDEAM---CDMLIKGWCVDGK 60
G+ D + +++ +C G A +++ L R++ ++ DML KG K
Sbjct: 506 GISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGC----K 561
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
++E + G++ + G VV Y ++D L R D + + ++L M G
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVD---GLIRSGDI----TGSFRILELMKLSGCLP 614
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
NV + ++I LC+ + E+A KL M + G PN T+ V+++ +L+ E +
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 181 DRMKSAGFGASLDKKAYYQFLTILC----GIERVEHA-LKVFAMMKAD------------ 223
M G+ L+ + Y L GI+ E + + A+ + D
Sbjct: 675 RAMVERGY--ELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732
Query: 224 ---GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
GC G+ + L+++L R D++N L RG+
Sbjct: 733 QLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGV 770
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 31/276 (11%)
Query: 23 SKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVV 81
SK S+AE + K+ L + P+ ++LI+G+C G ++ A L +M G VV
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 241
Query: 82 AYNAMLDCVCELCRQKDPF-LLHSEAEK---------------------------VLVEM 113
YN ++D C+L + D F LL S A K VL EM
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 114 DYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARL 173
+ RG + T+N LI CK AL + M G P+ T+ LI S+ +A +
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 174 EEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYD 233
E +D+M+ G +++ Y + + A +V M +G P + TY+
Sbjct: 362 NRAMEFLDQMRVRGLCP--NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 234 LLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
L++ +++ A A+ + + +GL+ Y+
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 39/297 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEEA 64
GL+ + S VV+ LC +G ++ ++ R + DE + LIKG+C +G +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE------------------LCRQKDPFLL---- 102
+ EM R G V+ Y +++ +C+ LC + +
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 103 ------HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+EA +VL EM+ G +V T+N LI C K EDA+ + M E G P+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 157 ETTFVVLIRSLYQAARLEEG----DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
++ ++ ++ ++E EM+++ G D Y + C R +
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEK------GIKPDTITYSSLIQGFCEQRRTKE 503
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
A ++ M G P TY L++ ++KA L +E +G+ Y+V
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 113/286 (39%), Gaps = 39/286 (13%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGF 76
V K +AS + +++ + + ++ D+++K + +++A + GF
Sbjct: 106 VAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF 165
Query: 77 ELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIR 136
GV++YNA+LD R S AE V EM V NV T+N+LI C
Sbjct: 166 MPGVLSYNAVLDATIRSKRNI------SFAENVFKEMLESQVSPNVFTYNILIRGFCFAG 219
Query: 137 KTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI---------------- 180
+ AL LF +M GC PN T+ LI + ++++G +++
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 181 ---------DRMKSAGF--------GASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
RMK F G SLD+ Y + C AL + A M
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G P + TY L+ + +++A + + RGL + Y
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 25/200 (12%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + +++ C + A + +++ RV + PDE LI +C++G LE+A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDY-RGVPRNVE 123
+L EM G VV Y+ +++ + + R + EA+++L+++ Y VP +V
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR-------EAKRLLLKLFYEESVPSDV- 591
Query: 124 TFNVLITN---------------LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
T++ LI N C +A ++F M P+ T + ++I
Sbjct: 592 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 651
Query: 169 QAARLEEGDEMIDRMKSAGF 188
+A + + + M +GF
Sbjct: 652 RAGDIRKAYTLYKEMVKSGF 671
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 11/267 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLE 62
D G K + + +++ LC KG A M++++ R + P+ LI G C G E
Sbjct: 280 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 339
Query: 63 EARRLAGEMYRG-GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+A RL ++ R ++ V Y +M+ C ++D + AE + M +G+ N
Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYC----KEDKL---NRAEMLFSRMKEQGLFPN 392
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T+ LI CK A +L + MG+ G PN T+ I SL + +R E E+++
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
+ S G A D Y + C + AL F M G E ++ ++L++
Sbjct: 453 KAFSCGLEA--DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYA 268
++ ++ LF S GL T + Y
Sbjct: 511 QKKMKESERLFQLVVSLGLIPTKETYT 537
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 9/221 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+FP+ LI G C G A L M GF + YNA +D +C+ R + +
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L ++A +E D GV T+ +LI CK AL F RM + G +
Sbjct: 449 ELLNKAFSCGLEAD--GV-----TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 501
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+LI + + +++E + + + S G + K+ Y ++ C ++ ALK F M
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPT--KETYTSMISCYCKEGDIDLALKYFHNM 559
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
K GC P TY L+S L + VD+A L+ RGL+
Sbjct: 560 KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 11/266 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D S K++V G A+R + + R PD A C +++ C +G + A
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+M GF+ ++ + +++D +C+ K F ++L EM G NV T
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF-------EMLEEMVRNGWKPNVYT 324
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCY-PNETTFVVLIRSLYQAARLEEGDEMIDRM 183
LI LCK TE A +LF ++ Y PN T+ +I + +L + + RM
Sbjct: 325 HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 384
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
K G +++ Y + C A ++ +M +G P I TY+ + L +
Sbjct: 385 KEQGLFPNVN--TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 442
Query: 244 RVDKANALFHEAQSRGLAVTPKEYAV 269
R +A L ++A S GL Y +
Sbjct: 443 RAPEAYELLNKAFSCGLEADGVTYTI 468
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYA-ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
D G + + ++ LC K A A E + K + + D +LI+ C +
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A M + GFE + N + + CRQK E+E++ + G+
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNIL---IAAFCRQKK----MKESERLFQLVVSLGLIPTK 533
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG----DE 178
ET+ +I+ CK + ALK FH M GC P+ T+ LI L + + ++E +
Sbjct: 534 ETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEA 593
Query: 179 MIDR 182
MIDR
Sbjct: 594 MIDR 597
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 128/293 (43%), Gaps = 35/293 (11%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
+++G+ D + ++ LC +AE + R D +M++ GWCV G +
Sbjct: 205 KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVC----------------ELCRQKDPFLLHS-- 104
EA+R ++ VV+Y M++ + + R D + ++
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 105 ----------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG-- 152
EA +V E+ +G NV T+N L+ +LCKIR+TE +L M G
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
C PN+ TF L++ + R ++ D +++RM A + Y + ++ E
Sbjct: 385 CSPNDVTFSYLLK---YSQRSKDVDIVLERM--AKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
++++ M+ G P +TY + + L ++ +A + F E S+G+ P+
Sbjct: 440 VREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPR 492
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
F +E ++L+ + K++EA + G + +VA++ +L LCR K
Sbjct: 175 FVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLL---MWLCRYK---- 227
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
H E + L R +++ N+++ C + +A + + + C P+ ++
Sbjct: 228 -HVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYG 286
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
+I +L + +L + E+ M D K + LC +R+ AL+VF +
Sbjct: 287 TMINALTKKGKLGKAMELYRAMWDTRRNP--DVKICNNVIDALCFKKRIPEALEVFREIS 344
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKE 266
G +P + TY+ L+ L R +K L E + +G + +P +
Sbjct: 345 EKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPND 389
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 13/269 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLE 62
+ GL+ D+ + + V LC G A+ ++K+L + PD + L+K C L
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 63 EARRLAGEMYRGGFEL--GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
EM R F++ +V++ ++D VC + EA ++ ++ G
Sbjct: 212 VVYEFVDEM-RDDFDVKPDLVSFTILIDNVCNSKNLR-------EAMYLVSKLGNAGFKP 263
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+ +N ++ C + K +A+ ++ +M E G P++ T+ LI L +A R+EE +
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
M AG+ D Y + +C AL + M+A GC P TY+ L+ L
Sbjct: 324 KTMVDAGYEP--DTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC 381
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+DK L+ +S G+ + YA
Sbjct: 382 KARLMDKGMELYEMMKSSGVKLESNGYAT 410
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDG 59
M D+ +K D S ++++ +C+ A +V L F PD + + ++KG+C
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
K EA + +M G E + YN ++ + + R + EA L M G
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE-------EARMYLKTMVDAGYE 332
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+ T+ L+ +C+ ++ AL L M GC PN+ T+ L+ L +A +++G E+
Sbjct: 333 PDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMEL 392
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
+ MKS+ G L+ Y + L +V A +VF
Sbjct: 393 YEMMKSS--GVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G K D +++ C+ S A + K + + PD+ + LI G G++EEA
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R M G+E Y ++++ +CR+ + A +L EM+ RG N T
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMN---GMCRKGESL----GALSLLEEMEARGCAPNDCT 372
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+N L+ LCK R + ++L+ M G + L+RSL ++ ++ E E+ D
Sbjct: 373 YNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 10/243 (4%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
+++D S +++ +C G A ++ + + I P+ +I G+ G+ +EA
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
L GEM G L V+YN +L ++ R + EA +L EM G+ ++V T+
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE-------EALDILREMASVGIKKDVVTY 482
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N L+ K K ++ K+F M PN T+ LI + +E E+ KS
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKS 542
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
AG A D Y + LC V A+ + M +G P + TY+ ++ G +
Sbjct: 543 AGLRA--DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 246 DKA 248
D++
Sbjct: 601 DRS 603
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 19/264 (7%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAE--RMVKDLARV-IFPDEAMCDMLIKGWCVDG 59
++YGL+ + + V++ C KG + + + ++ R + PD + L+ G
Sbjct: 295 KEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
E AR L EM E V +YN +LD +C+ + F ++L +M + +
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAF-------EILAQMPVKRIM 406
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
NV +++ +I K + ++AL LF M G + ++ L+ + R EE ++
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ M S G KK + +L G + + KVF MK + P + TY L+
Sbjct: 467 LREMASVGI-----KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 237 SKLGAHNRVDKANALFHEAQSRGL 260
+A +F E +S GL
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGL 545
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 22/216 (10%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
GK+ A+R+ + GG+ V A++A++ LH EA V M G+
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSG-------LHEEAISVFNSMKEYGL 299
Query: 119 PRNVETFNVLITNLCKIRKTE--DALKLFHRMGEWGCYPNETTFVVLIR-----SLYQAA 171
N+ T+N +I + C E K F M G P+ TF L+ L++AA
Sbjct: 300 RPNLVTYNAVI-DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
R DEM +R D +Y L +C +++ A ++ A M P + +
Sbjct: 359 R-NLFDEMTNRR------IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
Y ++ R D+A LF E + G+A+ Y
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 10/267 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLE 62
++G+K L ++ LC K ++A+ K I P +L++GW
Sbjct: 166 EFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDAS 225
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
AR++ EM + ++AYNA+LD LC+ D K+ EM G+ +
Sbjct: 226 GARKVFDEMLERNCVVDLLAYNALLDA---LCKSGDV----DGGYKMFQEMGNLGLKPDA 278
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
+F + I C A K+ RM + PN TF +I++L + ++++ ++D
Sbjct: 279 YSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDE 338
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M GA+ D Y + C V A K+ + M C P TY++++ L
Sbjct: 339 MIQK--GANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
R D+A ++ R T Y V
Sbjct: 397 GRFDRATEIWEGMSERKFYPTVATYTV 423
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 117/297 (39%), Gaps = 41/297 (13%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKL 61
+DYG S + L +G A R +++ R I P+ +M++ G+C GKL
Sbjct: 195 KDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKL 254
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
++ L +M R GF V+YN ++ CE L S A K+ M G+ N
Sbjct: 255 DKGIELLQDMERLGFRATDVSYNTLIAGHCEKG-------LLSSALKLKNMMGKSGLQPN 307
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V TFN LI C+ K ++A K+F M PN T+ LI Q E +
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 182 RM--------------------------KSAGFGASLDKK-------AYYQFLTILCGIE 208
M K+A F LDK+ + + C +
Sbjct: 368 DMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
+ +++ M GC P +T+++L+S + D A+ + E R + + +
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
A ++M G VE+ N +++L + + AL+ + M PN T +++
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
++ +L++G E++ M+ GF A+ +Y + C + ALK+ MM G
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRAT--DVSYNTLIAGHCEKGLLSSALKLKNMMGKSG 303
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+P + T++ L+ ++ +A+ +F E ++ +A Y
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 117/297 (39%), Gaps = 41/297 (13%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKL 61
+DYG S + L +G A R +++ R I P+ +M++ G+C GKL
Sbjct: 195 KDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKL 254
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
++ L +M R GF V+YN ++ CE L S A K+ M G+ N
Sbjct: 255 DKGIELLQDMERLGFRATDVSYNTLIAGHCEKG-------LLSSALKLKNMMGKSGLQPN 307
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V TFN LI C+ K ++A K+F M PN T+ LI Q E +
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 182 RM--------------------------KSAGFGASLDKK-------AYYQFLTILCGIE 208
M K+A F LDK+ + + C +
Sbjct: 368 DMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
+ +++ M GC P +T+++L+S + D A+ + E R + + +
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
A ++M G VE+ N +++L + + AL+ + M PN T +++
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
++ +L++G E++ M+ GF A+ +Y + C + ALK+ MM G
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRAT--DVSYNTLIAGHCEKGLLSSALKLKNMMGKSG 303
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+P + T++ L+ ++ +A+ +F E ++ +A Y
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 117/311 (37%), Gaps = 51/311 (16%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + ++V+ C G A + ++ V P+ LI + K+ A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE-------------LCRQKDPFLLHSEAEKVLV 111
L M G +V Y+A++D C+ +C KD + +
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV----PDVDMYFK 628
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+ D NV T+ L+ CK + E+A KL M GC PN+ + LI L +
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 172 RLEEGDEMIDRMKSAGFGASL---------------------------------DKKAYY 198
+L+E E+ M GF A+L + Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ + LC + + + A K+ MM+ GC+P + TY ++ G +++ L S+
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 259 GLAVTPKEYAV 269
G+A Y V
Sbjct: 809 GVAPNYVTYRV 819
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 99/262 (37%), Gaps = 56/262 (21%)
Query: 56 CVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDY 115
C GK E+A + EM GF Y+ +L+ +C + + FLL E M
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE-------MKR 511
Query: 116 RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
G+ +V T+ +++ + CK E A K F+ M E GC PN T+ LI + +A ++
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 176 GDEMIDRMKSAG-------FGASLDKK--------------------------------- 195
+E+ + M S G + A +D
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 196 ---------AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
Y L C RVE A K+ M +GCEP YD L+ L ++D
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 247 KANALFHEAQSRGLAVTPKEYA 268
+A + E G T Y+
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYS 713
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 90/220 (40%), Gaps = 7/220 (3%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
+P + + L+ +C G A +L +M + G G V YN ++ +C KD
Sbjct: 369 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG---SICGDKDSLN 425
Query: 102 --LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
L AEK EM GV N + LC K E A + M G P+ +T
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
+ ++ L A+++E + + MK G A D Y + C +E A K F
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVA--DVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
M+ GC P + TY L+ +V AN LF S G
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 104/241 (43%), Gaps = 44/241 (18%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ + +I G C GK +EA +L M G + VV Y AM+D + + +
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL-- 799
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCK-------------IRKTE---------- 139
++L M +GV N T+ VLI + CK +++T
Sbjct: 800 -----ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 140 ----------DALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFG 189
++L L +G+ P + + +LI +L +A RLE +++ + A F
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV--ATFS 912
Query: 190 ASLD--KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
A+L Y + LC +VE A ++F+ M G P ++++ L+ L ++++ +
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Query: 248 A 248
A
Sbjct: 973 A 973
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 100/270 (37%), Gaps = 17/270 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
L+ D +L+ LC G A +V+ PD LI G C EEA
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
M VV Y+ +L C C +Q ++VL M G + + F
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLL-CGCLNKKQL------GRCKRVLNMMMMEGCYPSPKIF 375
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL------YQAARLEEGDEM 179
N L+ C A KL +M + G P + +LI S+ L+ ++
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
M +AG L+K F LC + E A V M G P TY +++ L
Sbjct: 436 YSEMLAAG--VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
++++ A LF E + GL Y +
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTI 523
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 41/262 (15%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQ 96
L + I P+ +LIKG C DG++ EA + G++ + G E +V Y++++D C+
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 97 KDPFLLHSE----------------------------AEKVLVEMDYRGVPRNVETFNVL 128
+ F L+ + A + V+M + + NV FN L
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR-SLYQAARLEE-----GDEMIDR 182
I C++ + ++ALK+F MG +G P+ TF ++R S+ + A + G ++ D
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M+ A + L C R+E A K F + EP I TY+ ++ +
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKC--HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 620
Query: 243 NRVDKANALFHEAQSRGLAVTP 264
R+D+A +F L VTP
Sbjct: 621 RRLDEAERIFEL-----LKVTP 637
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 10/258 (3%)
Query: 16 VVVEKLCSKGFASYAERM-VKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
V+V+ L +G +A R VK L + I + + + LI GWC + +EA ++ M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAE---KVLVEMDYRGVPRNVETFNVLITN 131
G + V + ++ + +D F H + ++ M + ++ NV+I
Sbjct: 526 GIKPDVATFTTVM----RVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
L K + EDA K F+ + E P+ T+ +I RL+E + + + +K FG
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP- 640
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ + +LC ++ A+++F++M G +P TY LM ++ + L
Sbjct: 641 -NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 252 FHEAQSRGLAVTPKEYAV 269
F E Q +G++ + Y++
Sbjct: 700 FEEMQEKGISPSIVSYSI 717
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 106/272 (38%), Gaps = 51/272 (18%)
Query: 5 YGLKRDRGSLKVVV------EKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCV 57
YG+K D + V+ + C + ++ + R I D A+C+++I
Sbjct: 525 YGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 584
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
++E+A + + G E +V YN M+ C L R EAE++ +
Sbjct: 585 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL-------DEAERIFELLKVTP 637
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
N T +LI LCK + A+++F M E G PN T+ L+
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD------------ 685
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
F S+D +E + K+F M+ G P I +Y +++
Sbjct: 686 ---------WFSKSVD----------------IEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 238 KLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
L RVD+A +FH+A L YA+
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 752
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 30 AERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
AER+ + L F P+ +LI C + ++ A R+ M G + V Y ++D
Sbjct: 626 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 685
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+ + F K+ EM +G+ ++ +++++I LCK + ++A +FH+
Sbjct: 686 WFSKSVDIEGSF-------KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
+ P+ + +LIR + RL E + + M G
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 99/254 (38%), Gaps = 41/254 (16%)
Query: 17 VVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
++ C +G A + K + R I PD LI G+ G L +L + G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
+L VV +++ +D + D + A V M +G+ NV T+ +LI LC+
Sbjct: 352 VKLDVVVFSSTIDV---YVKSGD----LATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF------- 188
+ +A ++ ++ + G P+ T+ LI + L G + + M G+
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 189 ------------------------GAS--LDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
G S L+ + + C + R + ALKVF +M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 223 DGCEPGIKTYDLLM 236
G +P + T+ +M
Sbjct: 525 YGIKPDVATFTTVM 538
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 10/194 (5%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
GF +G+V+ N +L + D + S ++++ G NV TF LI CK
Sbjct: 247 GFRVGIVSCNKVLKGL-----SVDQIEVASRLLSLVLDC---GPAPNVVTFCTLINGFCK 298
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+ + A LF M + G P+ + LI ++A L G ++ + G LD
Sbjct: 299 RGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG--VKLDV 356
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+ + + + A V+ M G P + TY +L+ L R+ +A ++ +
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 255 AQSRGLAVTPKEYA 268
RG+ + Y+
Sbjct: 417 ILKRGMEPSIVTYS 430
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 11/230 (4%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
PD A + L+ + GK++E L EM E + +N ++ + + D
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
L+ + M R T+ LI L K + +A +LF M ++GC PN +
Sbjct: 877 LYYDL------MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
+LI +A + + RM G L K Y + LC + RV+ L F +K
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDL--KTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ-SRGLAVTPKEYAVD 270
G P + Y+L+++ LG +R+++A LF+E + SRG +TP Y +
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG--ITPDLYTYN 1036
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 121/306 (39%), Gaps = 57/306 (18%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF---------PDEAMCDMLIKG 54
D G D + V+++ LC+ A ++ D A+ +F PD L+
Sbjct: 286 DEGCGPDVVTYTVLIDALCT------ARKL--DCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 55 WCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMD 114
+ + L+ ++ EM + G VV + ++D +C+ EA L M
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN-------FGEAFDTLDVMR 390
Query: 115 YRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE 174
+G+ N+ T+N LI L ++ + +DAL+LF M G P T++V I ++
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV 450
Query: 175 EGDEMIDRMKSAGFGASL---------------------------------DKKAYYQFL 201
E ++MK+ G ++ D Y +
Sbjct: 451 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 202 TILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+ ++ A+K+ + M +GCEP + + L++ L +RVD+A +F + L
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 262 VTPKEY 267
T Y
Sbjct: 571 PTVVTY 576
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 126/301 (41%), Gaps = 49/301 (16%)
Query: 7 LKRDRGSLKVVVEKLCSKGF---ASYAERMVKDLARVI--FPDEAMCDMLIKGWCVDGKL 61
+KRD + + + L KG A YA R +++ V+ + + +L+K +
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
E RR+ E GF + Y++++ L +++D +L EM+ G+ N
Sbjct: 209 EVYRRMILE----GFRPSLQTYSSLM---VGLGKRRDI----DSVMGLLKEMETLGLKPN 257
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V TF + I L + K +A ++ RM + GC P+ T+ VLI +L A +L+ E+ +
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317
Query: 182 RMKSA--------------GFGASLDKKAYYQF---------------LTI----LCGIE 208
+MK+ F + D + QF TI LC
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
A +M+ G P + TY+ L+ L +R+D A LF +S G+ T Y
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 269 V 269
V
Sbjct: 438 V 438
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 16/263 (6%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLA--RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMY 72
+V+ L G A + DL R P LI G G+L EA++L M
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 73 RGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK---VLVEMDYRGVPRNVETFNVLI 129
G YN +++ F EA+ + M GV +++T++VL+
Sbjct: 919 DYGCRPNCAIYNILIN----------GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 130 TNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFG 189
LC + + ++ L F + E G P+ + ++I L ++ RLEE + + MK++ G
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR-G 1027
Query: 190 ASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
+ D Y + L VE A K++ ++ G EP + T++ L+ + + A
Sbjct: 1028 ITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1087
Query: 250 ALFHEAQSRGLAVTPKEYAVDPR 272
A++ + G + Y P
Sbjct: 1088 AVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 70 EMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLI 129
+M G +VA NA L + + R + EA+++ + G+ + T+N+++
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDR-------EAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 130 TNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFG 189
K+ + ++A+KL M E GC P+ LI +LY+A R++E +M RMK
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL- 569
Query: 190 ASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
K + T+L G+ +++ A+++F M GC P T++ L L ++ V
Sbjct: 570 ----KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 247 KANALFHEAQSRG 259
A + + G
Sbjct: 626 LALKMLFKMMDMG 638
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDG 59
DYG + + +++ G A A +RMVK+ R PD +L+ C+ G
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR---PDLKTYSVLVDCLCMVG 975
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+++E E+ G VV YN +++ + + R ++ +L +E + RG+
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS------RGIT 1029
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
++ T+N LI NL E+A K+++ + G PN TF LIR + + E +
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Query: 180 IDRMKSAGFGAS 191
M + GF +
Sbjct: 1090 YQTMVTGGFSPN 1101
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 50/264 (18%)
Query: 34 VKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCEL 93
+KD+ V PD +M++K + G+++EA +L EM G E V+ N++++ + +
Sbjct: 494 LKDIGLV--PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 94 CRQKDPFLLH----------------------------SEAEKVLVEMDYRGVPRNVETF 125
R + + + EA ++ M +G P N TF
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N L LCK + ALK+ +M + GC P+ T+ +I L + +++E +MK
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK- 670
Query: 186 AGFGASLDKKAYYQFL---TILCGIER---VEHALKV---FAMMKADGCEPGIKTYDLLM 236
K Y F+ T+L G+ + +E A K+ F AD +P ++ L+
Sbjct: 671 --------KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCAD--QPANLFWEDLI 720
Query: 237 SKLGAHNRVDKANALFHEAQSRGL 260
+ A +D A + + G+
Sbjct: 721 GSILAEAGIDNAVSFSERLVANGI 744
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 3/165 (1%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
A+ V +++ G +V T+N L+ K K ++ +L+ M C N T ++I
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 166 SLYQAARLEEG-DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
L +A +++ D D M F + Y + L R+ A ++F M G
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPT--ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
C P Y++L++ G D A ALF G+ K Y+V
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 44/219 (20%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R+I D + K V G L++A +M GF L +YN ++ + K
Sbjct: 147 RIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL-----KS 201
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
F +EA +V M G +++T++ L+ L K R + + L M G PN
Sbjct: 202 RFC--TEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
TF + IR L +A ++ E E++ RM
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDD--------------------------------- 286
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQS 257
+GC P + TY +L+ L ++D A +F + ++
Sbjct: 287 ----EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKT 321
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 10/257 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G++ D + ++ +L G + R++ D+ R+ I PD LI + +G+L EA
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ EM + +V YN++++ +C L EA+KVL + +G N T
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLC-------IHGLLDEAKKVLNVLVSKGFFPNAVT 326
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI CK ++ +D +K+ M G + T+ L + QA + ++++ RM
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV 386
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G D + L LC ++ AL ++ GI TY++++ L ++
Sbjct: 387 SCGVHP--DMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADK 444
Query: 245 VDKANALFHEAQSRGLA 261
V+ A LF +G++
Sbjct: 445 VEDAWYLFCSLALKGVS 461
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 31/259 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ D S +++ C S A + + ++ F P L+ G+C + EA
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF------------------------ 100
L ++ G+E VV YN ++D +CE +
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 101 LLHSE----AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
L HS + ++L +M G+ +V TF+ LI K + +A K ++ M + PN
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ LI L L+E ++++ + S GF + Y + C +RV+ +K+
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP--NAVTYNTLINGYCKAKRVDDGMKI 346
Query: 217 FAMMKADGCEPGIKTYDLL 235
+M DG + TY+ L
Sbjct: 347 LCVMSRDGVDGDTFTYNTL 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 13/144 (9%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D + L +G+C GK A ++ G M G + +N +LD +C+ H
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD----------H 407
Query: 104 SEAEKVLVEMDYRGVPRNVE---TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+ K LV ++ + V T+N++I LCK K EDA LF + G P+ T+
Sbjct: 408 GKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Query: 161 VVLIRSLYQAARLEEGDEMIDRMK 184
+ ++ L + E E+ +M+
Sbjct: 468 ITMMIGLRRKRLWREAHELYRKMQ 491
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
++ G+ ++ +F LI C+ + AL +M + G P+ TF L+
Sbjct: 104 HLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVN 163
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
R E ++D++ G G + Y + LC +V AL V MK G P + T
Sbjct: 164 RFYEAMSLVDQI--VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVT 221
Query: 232 YDLLMSKL 239
Y+ L+++L
Sbjct: 222 YNSLITRL 229
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 32/286 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D+ + + +++ LC +G + A + + L + I P+ + + LIKG G + EA
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP--------------------FLLHS 104
+LA EM G V +N +++ +C++ D L+H
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 105 EAEKVLVE--------MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+ ++ +E M GV +V T+N L+ LCK K ED ++ + M E GC PN
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
TF +L+ SL + +L+E +++ MK+ D + + C ++ A +
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP--DAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 217 F-AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
F M +A TY++++ V A LF E R L
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 22/265 (8%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWC--VDGK 60
RD G+ D S + ++ C A R++ +++ C+M + +C V G
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS------SQGCEMNVVAYCTVVGGF 191
Query: 61 LEEARR-----LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDY 115
EE + L G+M G L + +N +L LC++ D E EK+L ++
Sbjct: 192 YEENFKAEGYELFGKMLASGVSLCLSTFNKLLRV---LCKKGDV----KECEKLLDKVIK 244
Query: 116 RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
RGV N+ T+N+ I LC+ + + A+++ + E G P+ T+ LI L + ++ +E
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 176 GDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
+ + +M + G D Y + C V+ A ++ +G P TY L
Sbjct: 305 AEVYLGKMVNEGLEP--DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 236 MSKLGAHNRVDKANALFHEAQSRGL 260
+ L ++A ALF+EA +G+
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGI 387
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 11/250 (4%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPD--EAMCDMLIKGWCVD 58
M ++ G K + + V+EKL G E ++ D+ + E + +K +
Sbjct: 30 MRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRK 89
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
GK++EA + M E V +YNA++ + + +A KV + M RG+
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSG-------YFDQAHKVYMRMRDRGI 142
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+V +F + + + CK + AL+L + M GC N + ++ Y+ EG E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+ +M ++ G SL + + L +LC V+ K+ + G P + TY+L +
Sbjct: 203 LFGKMLAS--GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 239 LGAHNRVDKA 248
L +D A
Sbjct: 261 LCQRGELDGA 270
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 12/240 (5%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ + ++ LC +G A RMV L + PD + LI G C + K +EA G+M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G E YN ++ C+ + AE+++ + + G + T+ LI
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGG-------MVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
LC +T AL LF+ G PN + LI+ L + E ++ + M G
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ + + + LC + V A + +M + G P I T+++L+ G ++ NAL
Sbjct: 426 V--QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH--GYSTQLKMENAL 481
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 32/247 (12%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK- 108
+L++ + E R +M G V +YNA++DC+C+ R ++ + +E +
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454
Query: 109 ---------------------------VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDA 141
VL ++ G +V TF+++I LC+ ++ +DA
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514
Query: 142 LKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
F M EWG PNE T+ +LIRS + ++ +MK G S D AY +
Sbjct: 515 FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGL--SPDLYAYNATI 572
Query: 202 TILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
C + +V+ A ++ M G +P TY L+ L R +A +F + G
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG-- 630
Query: 262 VTPKEYA 268
P Y
Sbjct: 631 CVPDSYT 637
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 28/278 (10%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDM----LIKGW 55
ME+D L+R V+ L + A + ++ + R PD + + L+KG
Sbjct: 312 MEKDSNLQR--VGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGH 369
Query: 56 CVDGKLEEARRLAGEMYRG---GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVE 112
+ +E R G + RG GF +V A+L+ Q+ SE ++ L +
Sbjct: 370 DL---VETCRIFDGFVSRGVKPGFNGYLVLVQALLNA------QR-----FSEGDRYLKQ 415
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
M G+ +V ++N +I LCK R+ E+A M + G PN TF +
Sbjct: 416 MGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGD 475
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
+++ +++++ GF D + + LC + ++ A F M G EP TY
Sbjct: 476 VKKVHGVLEKLLVHGFKP--DVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITY 533
Query: 233 DLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVD 270
++L+ + D++ LF + + GL +P YA +
Sbjct: 534 NILIRSCCSTGDTDRSVKLFAKMKENGL--SPDLYAYN 569
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 24/271 (8%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR--VIFPDEAMCDMLIKGWCVDGK 60
++ G K + +++ G + R++ + R ++ P++ C++L++ WC K
Sbjct: 416 KESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRK 475
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDC---VCELCRQKD---PFLLHSEAEKVLVEMD 114
+EEA + +M G + VV +N + + C +D P +LH++
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK--------- 526
Query: 115 YRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE 174
V NV T ++ C+ K E+AL+ F+RM E G +PN F LI+ ++
Sbjct: 527 ---VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 175 EGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDL 234
E++D M+ FG D + + + ++ +++ M G +P I + +
Sbjct: 584 GVGEVVDLMEE--FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 235 LMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
L +KA + + Q R V P
Sbjct: 642 LAKGYARAGEPEKAEQILN--QMRKFGVRPN 670
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 8/185 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
L+ G G+ +EA + + G + ++ Y + V L RQK L S KV
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTL---VTALTRQKHFHSLLSLISKV- 380
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ G+ + FN +I + + A+K+F +M E GC P +TF LI+ +
Sbjct: 381 ---EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
+LEE ++D M D+ + C ++E A + M++ G +P +
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNI-LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 231 TYDLL 235
T++ L
Sbjct: 497 TFNTL 501
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 23/267 (8%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVIFPDEAMCDM--------------LIKGWCVDGKLE 62
+ ++ ++G SY R + L V CDM +++ C GK
Sbjct: 365 ISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
EA + +++ G + YN + + +L K +H EK M G ++
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKL---KQISHIHDLFEK----MKKDGPSPDI 477
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N+LI + ++ + ++A+ +F + C P+ ++ LI L + ++E
Sbjct: 478 FTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKE 537
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M+ G D Y + ERVE A +F M GC+P I TY++L+ L +
Sbjct: 538 MQEKGLNP--DVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKN 595
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
R +A L+ + + +GL Y V
Sbjct: 596 GRTAEAVDLYSKMKQQGLTPDSITYTV 622
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 109/277 (39%), Gaps = 90/277 (32%)
Query: 70 EMYRGGFELGVVAYNAMLDCV------CEL--------CRQKD---PFLLHS-------- 104
E+ RGG +L + AYN +LD + C++ CR+ + ++ +
Sbjct: 228 EIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCD 287
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
EA + EM G+ NV +N L+ L K + + A+++F RM E GC PNE T+ +L+
Sbjct: 288 EAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL 347
Query: 165 RSLY---QAARLEEGDEMIDRMKSAGFGASL---------------------------DK 194
L Q RL+ E+ R + G + L ++
Sbjct: 348 NLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGER 407
Query: 195 KAYYQFLTILCG-----------------------------------IERVEHALKVFAM 219
+Y L LCG ++++ H +F
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
MK DG P I TY++L++ G VD+A +F E +
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 31 ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV 90
E+M KD PD ++LI + G+++EA + E+ R + +++YN++++C
Sbjct: 466 EKMKKDGPS---PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINC- 521
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
L + D EA EM +G+ +V T++ L+ K + E A LF M
Sbjct: 522 --LGKNGDV----DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLV 575
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV 210
GC PN T+ +L+ L + R E ++ +MK G D Y T+L ++ V
Sbjct: 576 KGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTP--DSITY----TVLERLQSV 629
Query: 211 EHA 213
H
Sbjct: 630 SHG 632
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 103/255 (40%), Gaps = 25/255 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
G+ D +L V++ C G S+A ++++ RVI D + +I G C G +EA
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRN--RVISIDTVTYNTVISGLCEHGLADEAY 181
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVC----------------ELCRQKDPFLLHSEAEKV 109
+ EM + G V+YN ++D C EL LL S
Sbjct: 182 QFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLH 241
Query: 110 LVEMDYR-----GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
+E YR G +V TF+ +I LCK K + L M E YPN T+ L+
Sbjct: 242 AIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLV 301
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
SL++A + +M G +D Y + L + A K F M+ D
Sbjct: 302 DSLFKANIYRHALALYSQMVVRGI--PVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN 359
Query: 225 CEPGIKTYDLLMSKL 239
P + TY L+ L
Sbjct: 360 QVPNVVTYTALVDGL 374
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 10/263 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+K S +VV LC G A ++ + + I P+ + + + +
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 662
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + G +L YN ++ +C+L K +A V+ +M+ RG + T
Sbjct: 663 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTK-------KAAMVMGDMEARGFIPDTVT 715
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN L+ AL + M E G PN T+ +IR L A ++E D+ + MK
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G D Y ++ I ++ ++ ++ M ADG P TY++L+S+ +
Sbjct: 776 SRGMRP--DDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGK 833
Query: 245 VDKANALFHEAQSRGLAVTPKEY 267
+ +A L E RG++ Y
Sbjct: 834 MLQARELLKEMGKRGVSPNTSTY 856
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 10/203 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLE 62
YG+K R ++ LC G A ++ D+ AR PD + L+ G+ V +
Sbjct: 671 SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVR 730
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A M G V YN ++ R L E +K L EM RG+ +
Sbjct: 731 KALSTYSVMMEAGISPNVATYNTII-------RGLSDAGLIKEVDKWLSEMKSRGMRPDD 783
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N LI+ KI + ++ ++ M G P +T+ VLI ++ + E++
Sbjct: 784 FTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKE 843
Query: 183 MKSAGFGASLDKKAYYQFLTILC 205
M G S + Y ++ LC
Sbjct: 844 MGKR--GVSPNTSTYCTMISGLC 864
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 89/229 (38%), Gaps = 9/229 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P C++++ C +GK+EEA + +M + Y LD + R F
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 663
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
H + Y G+ + + +N LI LCK+ T+ A + M G P+ TF
Sbjct: 664 KTHETL------LSY-GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTF 716
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
L+ + + + + M AG ++ Y + L ++ K + M
Sbjct: 717 NSLMHGYFVGSHVRKALSTYSVMMEAGISPNV--ATYNTIIRGLSDAGLIKEVDKWLSEM 774
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
K+ G P TY+ L+S + + ++ E + GL Y V
Sbjct: 775 KSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNV 823
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 88/229 (38%), Gaps = 19/229 (8%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ PD ++LI +C G+L A L + + V YN ++ +CE
Sbjct: 125 VSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHG------ 175
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L EA + L EM G+ + ++N LI CK+ A L + E N T
Sbjct: 176 -LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLITH 230
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+L+ S Y +EE M +GF D + + LC +V + M
Sbjct: 231 TILLSSYYNLHAIEEAYR---DMVMSGFDP--DVVTFSSIINRLCKGGKVLEGGLLLREM 285
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ P TY L+ L N A AL+ + RG+ V Y V
Sbjct: 286 EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTV 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 25 GFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYN 84
A Y++ +V R I D + +L+ G G L EA + + VV Y
Sbjct: 313 ALALYSQMVV----RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYT 368
Query: 85 AMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKL 144
A++D LC+ D S AE ++ +M + V NV T++ +I K E+A+ L
Sbjct: 369 ALVD---GLCKAGDL----SSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 145 FHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
+M + PN T+ +I L++A + E E+ M+ G
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 12/229 (5%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D ++LI+G C GK E+A L G M G E +V YN ++ C+ +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ---GFCKSNEL---- 257
Query: 104 SEAEKVLVEMDYRGV-PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
++A ++ ++ V +V T+ +I+ CK K +A L M G YP TF V
Sbjct: 258 NKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ +A + +E+ +M S FG D + + C + +V +++ M A
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMIS--FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDP 271
G P TY +L++ L NR+ KA L + S+ + P+ + +P
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKD--IIPQPFMYNP 422
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 11/257 (4%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL--ARVIFPDEAMCDMLIKGWCVDGKLE 62
+G + D + +++ C + A M KD+ V PD +I G+C GK+
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
EA L +M R G V +N ++D + AE++ +M G +V
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML-------TAEEIRGKMISFGCFPDV 347
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
TF LI C++ + +L+ M G +PN T+ +LI +L RL + E++ +
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ 407
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+ S Y + C +V A + M+ C+P T+ +L+
Sbjct: 408 LASKDIIP--QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 243 NRVDKANALFHEAQSRG 259
R+ +A ++FH+ + G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLE 62
+G D + +++ C G S R+ +++ AR +FP+ +LI C + +L
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+AR L G++ YN ++D C+ + +EA ++ EM+ + +
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV-------NEANVIVEEMEKKKCKPDK 452
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
TF +LI C + +A+ +FH+M GC P++ T L+ L +A +E
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 43/218 (19%)
Query: 89 CVCELCRQKDPFLLHSEAEKV--LVEMDYR---------GVPRNVETFNVLITNLCKIRK 137
C C L + +PF+ +K+ + +R + + T+N+L +LCK
Sbjct: 59 CFCYLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGL 118
Query: 138 TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE------------EGDEMI----- 180
+ A ++F M G PN L+ S + +L EG M+
Sbjct: 119 HDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLL 178
Query: 181 ------DRMKSAG--------FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
DR++ A F + D K + + LCG+ + E AL++ +M GCE
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
P I TY+ L+ N ++KA+ +F + +S G +P
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSP 275
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 12/229 (5%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D ++LI+G C GK E+A L G M G E +V YN ++ C+ +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ---GFCKSNEL---- 257
Query: 104 SEAEKVLVEMDYRGV-PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
++A ++ ++ V +V T+ +I+ CK K +A L M G YP TF V
Sbjct: 258 NKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ +A + +E+ +M S FG D + + C + +V +++ M A
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMIS--FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDP 271
G P TY +L++ L NR+ KA L + S+ + P+ + +P
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKD--IIPQPFMYNP 422
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 11/257 (4%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL--ARVIFPDEAMCDMLIKGWCVDGKLE 62
+G + D + +++ C + A M KD+ V PD +I G+C GK+
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
EA L +M R G V +N ++D + AE++ +M G +V
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML-------TAEEIRGKMISFGCFPDV 347
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
TF LI C++ + +L+ M G +PN T+ +LI +L RL + E++ +
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ 407
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+ S Y + C +V A + M+ C+P T+ +L+
Sbjct: 408 LASKDIIP--QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 243 NRVDKANALFHEAQSRG 259
R+ +A ++FH+ + G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLE 62
+G D + +++ C G S R+ +++ AR +FP+ +LI C + +L
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+AR L G++ YN ++D C+ + +EA ++ EM+ + +
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV-------NEANVIVEEMEKKKCKPDK 452
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
TF +LI C + +A+ +FH+M GC P++ T L+ L +A +E
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 43/218 (19%)
Query: 89 CVCELCRQKDPFLLHSEAEKV--LVEMDYR---------GVPRNVETFNVLITNLCKIRK 137
C C L + +PF+ +K+ + +R + + T+N+L +LCK
Sbjct: 59 CFCYLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGL 118
Query: 138 TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE------------EGDEMI----- 180
+ A ++F M G PN L+ S + +L EG M+
Sbjct: 119 HDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLL 178
Query: 181 ------DRMKSAG--------FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
DR++ A F + D K + + LCG+ + E AL++ +M GCE
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
P I TY+ L+ N ++KA+ +F + +S G +P
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSP 275
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 9/224 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D+ + I G CV+G + +A + E+ G L V AY +++DC+C+ R +
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE------ 446
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
EA ++ EM GV N N LI L + + +A MG+ GC P ++ +L
Sbjct: 447 -EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I L +A + E + M G+ L K Y L LC +++ AL+++
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDL--KTYSILLCGLCRDRKIDLALELWHQFLQS 563
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
G E + +++L+ L + ++D A + + R Y
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 16/260 (6%)
Query: 17 VVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+++ LC K A +VK++++ + + +C+ LI G D +L EA EM + G
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
VV+YN + +C LC+ EA + EM G +++T+++L+ LC+
Sbjct: 495 CRPTVVSYNIL---ICGLCKAGK----FGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
RK + AL+L+H+ + G + +LI L +L++ ++ M+ A+L
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANL--- 604
Query: 196 AYYQFLTILCGIERV---EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
+ T++ G +V A ++ M G +P I +Y+ +M L V A F
Sbjct: 605 --VTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFF 662
Query: 253 HEAQSRGLAVTPKEYAVDPR 272
+A++ G+ T + + R
Sbjct: 663 DDARNHGIFPTVYTWNILVR 682
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 113/234 (48%), Gaps = 12/234 (5%)
Query: 31 ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV 90
+R+++D + ++P+ +++I G G++++ ++ M + E + Y++++ +
Sbjct: 243 DRLLEDSS--VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
C+ +AE V E+D R +V T+N ++ C+ K +++L+L+ R+ E
Sbjct: 301 CDAGNV-------DKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIME 352
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV 210
N ++ +LI+ L + +++E + M + G+ A DK Y F+ LC V
Sbjct: 353 HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA--DKTTYGIFIHGLCVNGYV 410
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
AL V +++ G + Y ++ L R+++A+ L E G+ +
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 45/228 (19%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P+ ++LIK C + E+AR M++ GF+ V +Y+ +++ + + + D
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD-- 202
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE-WGCYPNETT 159
A ++ EM RGV +V +N+LI K + + A++L+ R+ E YPN T
Sbjct: 203 -----ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKT 257
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
++I L + CG RV+ LK++
Sbjct: 258 HNIMISGLSK-----------------------------------CG--RVDDCLKIWER 280
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
MK + E + TY L+ L VDKA ++F+E R ++ Y
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTY 328
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 10/219 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LI G C G +++A + E+ + VV YN ML C + K E+ ++
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIK-------ESLELW 348
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M+++ N+ ++N+LI L + K ++A ++ M G ++TT+ + I L
Sbjct: 349 RIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
+ + ++ ++S+G LD AY + LC +R+E A + M G E
Sbjct: 408 GYVNKALGVMQEVESSG--GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ L+ L +R+ +A+ E G T Y +
Sbjct: 466 VCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 11/256 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV--IFPDEAMCDMLIKGWCVDGK 60
+ G+ + ++ L +G A + ++ R + PD + LI G+C +
Sbjct: 165 KQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSM 224
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG--V 118
++EA R+ +M VV YN ++D +C + K A VL M + V
Sbjct: 225 VDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI-------AHNVLSGMLKKATDV 277
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
NV ++ L+ C ++ ++A+ +FH M G PN T+ LI+ L +A R +E +
Sbjct: 278 HPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKD 337
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
++ A + D + + C ++ A+KVF M P +Y +L+
Sbjct: 338 ILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRT 397
Query: 239 LGAHNRVDKANALFHE 254
L N D+A LF+E
Sbjct: 398 LCMRNEFDRAETLFNE 413
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 6/199 (3%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ LI+ + G +E+ +L M + G V+ +N++L + + R L E +
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
GV + TFN LI CK ++A ++F M + C P+ T+ +I L
Sbjct: 202 TY------GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC 255
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+A +++ ++ M + +Y + C + ++ A+ VF M + G +P
Sbjct: 256 RAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPN 315
Query: 229 IKTYDLLMSKLGAHNRVDK 247
TY+ L+ L +R D+
Sbjct: 316 AVTYNTLIKGLSEAHRYDE 334
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 115/278 (41%), Gaps = 25/278 (8%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDG 59
M R YG+ D + ++ C A R+ KD+ PD + +I G C G
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 60 KLEEARRLAGEMYRGGFEL--GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
K++ A + M + ++ VV+Y ++ C + ++ D EA V +M RG
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYC-MKQEID------EAVLVFHDMLSRG 311
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCY----PNETTFVVLIRSLYQAARL 173
+ N T+N LI L + + ++ + +G + P+ TF +LI++ A L
Sbjct: 312 LKPNAVTYNTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHL 369
Query: 174 EEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF-------AMMKADGCE 226
+ ++ M + D +Y + LC + A +F ++ D C+
Sbjct: 370 DAAMKVFQEMLNMKLHP--DSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECK 427
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
P Y+ + L A+ + +A +F + RG+ P
Sbjct: 428 PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP 465
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 19/239 (7%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL---ARVIFPDEAMCDMLIKGWCVDGKL 61
Y D + +++ LC G A ++ + A + P+ L++G+C+ ++
Sbjct: 238 YHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEI 297
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMD--YRGVP 119
+EA + +M G + V YN ++ + E R + E + +L+ + +
Sbjct: 298 DEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR-------YDEIKDILIGGNDAFTTFA 350
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+ TFN+LI C + A+K+F M +P+ ++ VLIR+L + + +
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 180 IDRM--KSAGFGASLDK---KAYYQFLTILCGIERVEHALKVFAMMKADGCE--PGIKT 231
+ + K G K AY LC + + A KVF + G + P KT
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKT 469
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMG-EWGCYPNETTF 160
L E+ K+ M G+ +V TFN L++ L K +T A LF M +G P+ TF
Sbjct: 153 LFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTF 212
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI + + ++E + M+ + + D Y + LC +V+ A V + M
Sbjct: 213 NTLINGFCKNSMVDEAFRIFKDMEL--YHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGM 270
Query: 221 --KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
KA P + +Y L+ +D+A +FH+ SRGL Y
Sbjct: 271 LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI + ++++KLF M + G P+ TF L+ L + R ++ D M+
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+G + D + + C V+ A ++F M+ C P + TY+ ++ L +
Sbjct: 201 RT-YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259
Query: 245 VDKANALFHEAQSRGLAVTPK 265
V A+ + + V P
Sbjct: 260 VKIAHNVLSGMLKKATDVHPN 280
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 14/235 (5%)
Query: 27 ASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKL-EEARRLAGEMYRGGFELGVVAYNA 85
S E+M D I PD + LI C G L +EA ++ EM GF V YNA
Sbjct: 264 TSLVEKMKSD---GIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 86 MLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLF 145
+LD + R K EA KVL EM G ++ T+N LI+ + ++A++L
Sbjct: 320 LLDVYGKSHRPK-------EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 146 HRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILC 205
++M E G P+ T+ L+ +A ++E + + M++AG ++ + F+ +
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI--CTFNAFIKMYG 430
Query: 206 GIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ +K+F + G P I T++ L++ G + + + +F E + G
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 118/293 (40%), Gaps = 38/293 (12%)
Query: 2 ERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGK 60
++DY D + +++ L +G S A M L F D LI + G+
Sbjct: 164 QKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGR 223
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL------------------- 101
EA + +M G + ++ YN +L+ ++ +
Sbjct: 224 YREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYN 283
Query: 102 ----------LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW 151
LH EA +V EM G + T+N L+ K + ++A+K+ + M
Sbjct: 284 TLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN 343
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER-- 209
G P+ T+ LI + + L+E E+ ++M G K + + T+L G ER
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG-----TKPDVFTYTTLLSGFERAG 398
Query: 210 -VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
VE A+ +F M+ GC+P I T++ + G + + +F E GL+
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%), Gaps = 9/198 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P + LI + DG L+EA L +M G + V Y +L + +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE----- 401
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A + EM G N+ TFN I K + +K+F + G P+ T+
Sbjct: 402 --SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ Q E + MK AGF +++ + ++ E A+ V+ M
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVP--ERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 223 DGCEPGIKTYDLLMSKLG 240
G P + TY+ +++ L
Sbjct: 518 AGVTPDLSTYNTVLAALA 535
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 10/246 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLE 62
D G+ D + V+ L G +E+++ ++ P+E L+ + ++
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG 576
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
LA E+Y G E V ++ VC C L EAE+ E+ RG ++
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLLKTLV-LVCSKCD------LLPEAERAFSELKERGFSPDI 629
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T N +++ + + A + M E G P+ T+ L+ ++A + +E++
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+ + G D +Y + C R+ A ++F+ M+ G P + TY+ + A
Sbjct: 690 ILAKGIKP--DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 243 NRVDKA 248
+ ++A
Sbjct: 748 SMFEEA 753
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 93/261 (35%), Gaps = 46/261 (17%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ + IK + GK E ++ E+ G +V +N +L + +
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG-------M 469
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-------------- 148
SE V EM G ETFN LI+ + E A+ ++ RM
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 149 --------GEWG-------------CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
G W C PNE T+ L+ + + + + + S
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS-- 587
Query: 188 FGASLDKKAYYQFLTILCG-IERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
G + + L ++C + + A + F+ +K G P I T + ++S G V
Sbjct: 588 -GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 247 KANALFHEAQSRGLAVTPKEY 267
KAN + + RG + Y
Sbjct: 647 KANGVLDYMKERGFTPSMATY 667
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLE 62
++G K + +++ L A+++ + + F PD +L++GW + L
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+ EM GFE VVAY +++ C+ + + EA + EM+ R +
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKK-------YEEAIRFFNEMEQRNCKPSP 302
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
F LI L +K DAL+ F R G T+ L+ + + R+E+ + +D
Sbjct: 303 HIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDE 362
Query: 183 MKSAGFGASL---------------DKKAY--YQFLT-------------ILCGIERVEH 212
M+ G G + K+AY YQ ++ + C ER++
Sbjct: 363 MRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDM 422
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
A+K++ MK G PG+ + L++ L N++D+A F+E G+
Sbjct: 423 AIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 2/163 (1%)
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
EA +M+ G FN ++ L K R DA K+F +M + P+ ++ +L+
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
Q L DE+ MK GF D AY + C ++ E A++ F M+
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEP--DVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN 297
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
C+P + L++ LG+ +++ A F ++S G + Y
Sbjct: 298 CKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 340
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G+ D S + ++ LC G AS A+ V L + +C L+ G+C +GKLEEA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ EM + G +L +V Y ++D + KD L +L EM RG+ +
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGS---LKHKDRKLFFG----LLKEMHDRGLKPDDVI 684
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +I K ++A ++ M GC PNE T+ +I L +A + E + + +M+
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 185 SAG-------FGASLD--------------------------KKAYYQFLTILCGIERVE 211
+G LD Y + C R+E
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
A ++ M DG P TY ++++L N V KA L++ +G+
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 10/248 (4%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
V+++ LC K A + KDLA + + PD L+ G C + E + EM
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
F A ++++ E R++ EA ++ + GV N+ +N LI +LC
Sbjct: 326 LRFSPSEAAVSSLV----EGLRKRGKI---EEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
K RK +A LF RMG+ G PN+ T+ +LI + +L+ + M G S+
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV- 437
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y + C + A A M EP + TY LM + +++KA L+H
Sbjct: 438 -YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 254 EAQSRGLA 261
E +G+A
Sbjct: 497 EMTGKGIA 504
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 123/295 (41%), Gaps = 31/295 (10%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
D+G+ + +++ LC AE + + ++ + P++ +LI +C GKL+
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCE--------------LCRQKDPFLLH----- 103
A GEM G +L V YN++++ C+ + ++ +P ++
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 104 ---------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCY 154
++A ++ EM +G+ ++ TF L++ L + DA+KLF+ M EW
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539
Query: 155 PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHAL 214
PN T+ V+I + + + E + M G D +Y + LC + A
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP--DTYSYRPLIHGLCLTGQASEAK 597
Query: 215 KVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ CE Y L+ ++++A ++ E RG+ + Y V
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 10/239 (4%)
Query: 30 AERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
A + D+ V I PD + +I+ C L A+ + M G ++ +V YN ++D
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+C+ +QK EA + ++ + + +V T+ L+ LCK+++ E L++ M
Sbjct: 271 GLCK--KQK-----VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
P+E L+ L + ++EE ++ R+ FG S + Y + LC
Sbjct: 324 LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV--VDFGVSPNLFVYNALIDSLCKGR 381
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+ A +F M G P TY +L+ ++D A + E GL ++ Y
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A L +M G V Y ++ +CEL KD S A++++ M+ G N+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCEL---KDL----SRAKEMIAHMEATGCDVNIV 263
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+NVLI LCK +K +A+ + + P+ T+ L+ L + E G EM+D M
Sbjct: 264 PYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
F S + A + L ++E AL + + G P + Y+ L+ L
Sbjct: 324 LCLRFSPS--EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 244 RVDKANALFHEAQSRGLAVTPKEYAV 269
+ +A LF GL Y++
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSI 407
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ + A +MLI+G+C G++EEA L M G + Y M++ ELCR+ D
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN---ELCRRNDV- 838
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
+A ++ M +G+ + +N LI C + A +L + M G PN T
Sbjct: 839 ---KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 106/269 (39%), Gaps = 41/269 (15%)
Query: 22 CSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGV 80
CSKG + A R+ ++ + I P L+ G G + +A +L EM +
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 81 VAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
V YN M++ CE + D S+A + L EM +G+ + ++ LI LC + +
Sbjct: 543 VTYNVMIEGYCE---EGD----MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG----DEMIDR---MKSAGFGASLD 193
A + + C NE + L+ + +LEE EM+ R + +G +D
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 194 KKAYYQFLTILCGIERVEH--------------------------ALKVFAMMKADGCEP 227
++ + G+ + H A ++ +M +GC P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
TY +++ L V++A L + Q
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 10/255 (3%)
Query: 2 ERDYGLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGK 60
R +G+ + S ++++ C S A ++ K L R + PD +LI+G+C G+
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
+ A L +M GF ++Y +L+ +C + + EA K+L M +G
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR-------EAYKLLCRMKLKGCNP 293
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
++ +N +I C+ + DA K+ M GC PN ++ LI L +EG + +
Sbjct: 294 DLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYL 353
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
+ M S GF + C +VE A V ++ +G T+++++ +
Sbjct: 354 EEMISKGFSPHFSVSNC--LVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Query: 241 AHNRVDKANALFHEA 255
+ +K +A
Sbjct: 412 NEDESEKIKLFLEDA 426
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 9/203 (4%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G L++A L G +YN ++ C D S A ++ +M R V
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC----LNDDL---SIAYQLFGKMLERDV 221
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+V+++ +LI C+ + A++L M G P+ ++ L+ SL + +L E +
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYK 281
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
++ RMK G + D Y + C +R A KV M ++GC P +Y L+
Sbjct: 282 LLCRMKLKG--CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 239 LGAHNRVDKANALFHEAQSRGLA 261
L D+ E S+G +
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFS 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
GV N ++N+L+ C A +LF +M E P+ ++ +LI+ + ++
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
E++D M + GF D+ +Y L LC ++ A K+ MK GC P + Y+ ++
Sbjct: 245 MELLDDMLNKGFVP--DRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMI 302
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+R A + + S G + Y
Sbjct: 303 LGFCREDRAMDARKVLDDMLSNGCSPNSVSY 333
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 37/257 (14%)
Query: 44 DEAMCDMLIKGWC-VDGKLEEARRLAGEMYRGGFELGVVAYNAMLDC---------VCEL 93
D ++++ GWC V G EA R+ EM G + VV+Y++M+ C V +L
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 324
Query: 94 -------CRQKD----PFLLH--------SEAEKVLVEMDY-RGVPRNVETFNVLITNLC 133
C + D ++H SEA ++ M+ +G+ NV T+N LI LC
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 384
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
K RKTE+A ++F M E G +P T+ +R L EE E++ +M+ G +++
Sbjct: 385 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG---EEVFELLAKMRKMGCEPTVE 441
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y + LC ++ L ++ MK P + +Y +++ L + ++++A +
Sbjct: 442 --TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYK 499
Query: 254 EAQSRGLAVTPKEYAVD 270
E + +G+ P E D
Sbjct: 500 EMKDKGM--RPNENVED 514
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 107/253 (42%), Gaps = 32/253 (12%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAML---------------- 87
DE C ++ +G L EA+ E+ G+E G V YNA+L
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 88 ----------DCVC--ELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
D V EL EA V+ M +GV N T+ +I K
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
K ++ALKLF+ M E GC PN T+ ++ L + +R E +M+ MKS G + +
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN---R 456
Query: 196 AYYQFLTILCGIERVEHAL-KVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
A + + LCG + ++ + +VF MK+ G EP T++ L+S G A+ ++ E
Sbjct: 457 ATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE 516
Query: 255 AQSRGLAVTPKEY 267
G Y
Sbjct: 517 MTRAGFNACVTTY 529
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 10/235 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKL 61
+ G +R + ++ +KG + R+ +++ F PD + LI + G
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+A ++ GEM R GF V YNA+L+ L R+ D E V+ +M +G
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNA---LARKGD----WRSGENVISDMKSKGFKPT 560
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
++++++ K ++ +R+ E +P+ L+ + ++ L +
Sbjct: 561 ETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT 620
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
K G+ D + L+I + A + ++ DG P + TY+ LM
Sbjct: 621 LFKKHGYKP--DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 106/249 (42%), Gaps = 10/249 (4%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
V++ LCS G A + D+ R + PD + LI C +GK +EA L G M
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
GG ++Y ++ LC D + A + L+ M + V +NV+I
Sbjct: 364 GGVAPDQISYKVIIQ---GLCIHGDV----NRANEFLLSMLKSSLLPEVLLWNVVIDGYG 416
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ T AL + + M +G PN T LI + RL + + + M+S D
Sbjct: 417 RYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP--D 474
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y L C + + A +++ M GC+P I TY L+ L R+ KA +L
Sbjct: 475 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS 534
Query: 254 EAQSRGLAV 262
Q+ G+ +
Sbjct: 535 RIQATGITI 543
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 44/256 (17%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
+++ C+ GKL+ A L +M G G++ +N +L+ +C K ++ +A+ ++
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLC-----KAGYI--EKADGLV 179
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
EM G N ++N LI LC + + AL LF+ M ++G PN T +++ +L Q
Sbjct: 180 REMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQK 239
Query: 171 ARLEEGDEMI--DRMKSAGFGASL-----------------------------------D 193
+ ++ + + + S+ A L D
Sbjct: 240 GVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPAD 299
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y + LC + A M G P + TY+ L+S L + D+A L
Sbjct: 300 SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHG 359
Query: 254 EAQSRGLAVTPKEYAV 269
Q+ G+A Y V
Sbjct: 360 TMQNGGVAPDQISYKV 375
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 20/240 (8%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERM----VKDLARVIFP-DEAMCDMLIKGWCVDG 59
YG++ +R + ++V LC KG + + D ++ P D +C +L+ +G
Sbjct: 220 YGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNG 279
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ +A + EM + V YN ++ +C A + +M RGV
Sbjct: 280 NVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNM-------VAAYGFMCDMVKRGVN 332
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V T+N LI+ LCK K ++A L M G P++ ++ V+I+ L + +E
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLM 236
+ M + + + ++ G R AL V +M + G +P + T + L+
Sbjct: 393 LLSMLKSSLLPEV-----LLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA-ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D+ S KV+++ LC G + A E ++ L + P+ + +++I G+ G A
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSA 424
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ M G + V NA++ + R D + + +E + D T
Sbjct: 425 LSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD-------TTT 477
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+L+ C + A +L+ M GC P+ T+ L+R L RL++ + ++ R++
Sbjct: 478 YNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQ 537
Query: 185 SAGF 188
+ G
Sbjct: 538 ATGI 541
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 27/245 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
L D + +++ LC + + A R+ + + IFP A + LI G+C + +E+A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM G E ++ ++ ++D C + K A + EM +G+ +V T
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIK-------AAMGLYFEMTIKGIVPDVVT 481
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARL-------EEGD 177
+ LI K ++AL+L+ M E G +PN+ TF L+ ++ RL +E +
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+ GF ++ LC + A + F+ M++ G P I +Y +S
Sbjct: 542 QQRSCWNHVGFTCLIEG---------LCQNGYILRASRFFSDMRSCGITPDICSY---VS 589
Query: 238 KLGAH 242
L H
Sbjct: 590 MLKGH 594
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 116/293 (39%), Gaps = 37/293 (12%)
Query: 4 DYGLKRDRG-----SLKVVVEKLCSK-GFASYAERMVKDLARV-IFPDEAMCDMLIKGWC 56
DY L RG + V+ + C K G S E+++ ++ + I P+ + + I C
Sbjct: 186 DYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLC 245
Query: 57 VDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSE----------- 105
D K+EEA ++ M + G + Y+AM+D C+ + + L+ E
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305
Query: 106 -----------------AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
A + V M GV N+ +N LI CK +A+ L M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
P+ T+ +LI L ++ E + + +MK+ S Y + C
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS--SATYNSLIHGYCKEY 423
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+E AL + + M A G EP I T+ L+ + A L+ E +G+
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 115/267 (43%), Gaps = 10/267 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKL 61
+ +G+ + + +++ C G A + K+ L + P+ + L+ G+C +L
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
AR L M + G + + YN ++ C K +L EA +L EM+ + +
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHC-----KSGNML--EAVGLLSEMESLNLSPD 373
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T+ +LI LC + +A +LF +M +P+ T+ LI + +E+ ++
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M ++G ++ + + C + ++ A+ ++ M G P + TY L+
Sbjct: 434 EMTASGVEPNI--ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYA 268
+ +A L+ + G+ +A
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFA 518
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 16/175 (9%)
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
L+S+ EK+L EM G+ NV + + I +LC+ K E+A K+F M + G PN T+
Sbjct: 214 LYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYS 273
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAG-------FGASLDKKAYYQFLTILCGIERVEHAL 214
+I + + + + + A FG +D C + A
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG---------FCKARELVTAR 324
Query: 215 KVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+F M G +P + Y+ L+ + +A L E +S L+ Y +
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 9/219 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
++KG C G L+ A + EM G VV Y ++ + R D A +VL
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD-------AMRVL 475
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
EM +G+ ++ +N LI L K ++ ++A M E G PN T+ I +A
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
+ D+ + M+ G +K + C +V A + M G K
Sbjct: 536 SEFASADKYVKEMRECGVLP--NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY +LM+ L +++VD A +F E + +G+A Y V
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 116/270 (42%), Gaps = 11/270 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKL 61
R G+ D S V++ G A + ++ + P+ + +ML+ G+C G++
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
E+A+ L EM G V Y ++D C+ D +EA ++ EM +G+ +
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIID---GYCKSGD----LAEAFRLFDEMKLKGLVPD 731
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+ L+ C++ E A+ +F + GC + F LI +++ + E E+++
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 182 RMKSAGFG--ASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
R+ F + Y + LC +E A ++F M+ P + TY L++
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
R + +F EA + G+ Y+V
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSV 880
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 11/228 (4%)
Query: 26 FASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYN 84
FAS A++ VK++ + P++ +C LI +C GK+ EA M G Y
Sbjct: 538 FAS-ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 85 AMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKL 144
+++ + + + D AE++ EM +G+ +V ++ VLI K+ + A +
Sbjct: 597 VLMNGLFKNDKVDD-------AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 145 FHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTIL 204
F M E G PN + +L+ ++ +E+ E++D M G + Y +
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP--NAVTYCTIIDGY 707
Query: 205 CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
C + A ++F MK G P Y L+ N V++A +F
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 10/232 (4%)
Query: 30 AERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
A R++K++ + I PD + LI G +++EAR EM G + Y A +
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
E + A+K + EM GV N LI CK K +A + M
Sbjct: 531 GYIEASE-------FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
+ G + T+ VL+ L++ ++++ +E+ M+ G G + D +Y + +
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR--GKGIAPDVFSYGVLINGFSKLG 641
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
++ A +F M +G P + Y++L+ ++KA L E +GL
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 17/271 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLE 62
D G+ D + V++ L AE + +++ + I PD +LI G+ G ++
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A + EM G V+ YN +L CR + +A+++L EM +G+ N
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLG---GFCRSGEI----EKAKELLDEMSVKGLHPNA 697
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+ +I CK +A +LF M G P+ + L+ RL + + I
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG---CCRLNDVERAITI 754
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGC-----EPGIKTYDLLMS 237
+ G + + + + + E +V + DG +P TY++++
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRL-MDGSFDRFGKPNDVTYNIMID 813
Query: 238 KLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
L ++ A LFH+ Q+ L T Y
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 10/233 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + ++++ L A A+ +V ++ + I M D I +G +E+A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ L M G AY ++++ CR+K+ + ++LVEM R + + T
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIE---GYCREKNV----RQGYELLVEMKKRNIVISPYT 419
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ ++ +C + A + M GC PN + LI++ Q +R + ++ MK
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
G D Y + L +R++ A M +G +P TY +S
Sbjct: 480 EQGIAP--DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 9/221 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P + D+LI G C +LE+A+ L EM G L Y+ ++D + + R D
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADA- 330
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
A+ ++ EM G+ ++ I + K E A LF M G P +
Sbjct: 331 -----AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI + + +G E++ MK S Y + +C ++ A + M
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVIS--PYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
A GC P + Y L+ ++R A + E + +G+A
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T++VLI LCKI++ EDA L M G + T+ +LI L + + ++ M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 184 KSAGFGASLDKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
S G Y + +C + + +E A +F M A G P + Y L+
Sbjct: 339 VSHGINIK-----PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKEYAV 269
V + L E + R + ++P Y
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGT 422
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 16/240 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + + +++ C G + A R+ ++ + + PD + L+ G C +E A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVE--MDYRGVPRNV 122
+ G +G +NA+++ V + + + L +E L++ D G P +V
Sbjct: 752 ITIFGTNKKGCAS-STAPFNALINWVFKFGKTE----LKTEVLNRLMDGSFDRFGKPNDV 806
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N++I LCK E A +LFH+M P T+ L+ + R E + D
Sbjct: 807 -TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA-----DGCEPGIKTYDLLMS 237
+AG D Y + AL + M A DGC+ I T L+S
Sbjct: 866 AIAAGIEP--DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 10/226 (4%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
++++ LC A +++++ R + PD + +I+G+C +LE+A LA EM
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
G +V + ++D C+ + EA L EM + G+ ++ + LI C
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKM-------DEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ + LF + E G P T+ LIR + +L+E E+ + M G ++
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV- 317
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
Y + LCG+ + + AL++ +M EP TY+++++KL
Sbjct: 318 -YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 112/236 (47%), Gaps = 12/236 (5%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
++++ C G A +K++ + + D + LI+G+C G+L+ + L E+
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
G + YN ++ C+L + K EA ++ M RGV NV T+ LI LC
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLK-------EASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+ KT++AL+L + M E PN T+ ++I L + + + E+++ MK D
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR--RTRPDN 387
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADG--CEPGIKTYDLLMSKLGAHNRVDKA 248
Y L LC ++ A K+ +M D +P + +Y+ L+ L NR+ +A
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 23/211 (10%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ LI+G+C G+L+EA + M G V Y ++D +C + + K EA +
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK-------EALQ 338
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+L M + N T+N++I LCK DA+++ M + P+ T+ +L+ L
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
L+E +++ M D +Y + LC R+ AL +
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI------------ 446
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
YDLL+ KLGA +RV N L + G
Sbjct: 447 ---YDLLVEKLGAGDRV-TTNILLNSTLKAG 473
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 9/204 (4%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
+LI +C GK++EA EM G E +V Y +++ C+ C + D + +
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD-CGELD------RGKAL 269
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
E+ RG T+N LI CK+ + ++A ++F M E G PN T+ LI L
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
+ +E ++++ M + Y + LC V A+++ +MK P
Sbjct: 330 VGKTKEALQLLNLMIEKD--EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 230 KTYDLLMSKLGAHNRVDKANALFH 253
TY++L+ L A +D+A+ L +
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLY 411
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 13/197 (6%)
Query: 67 LAGEMYRGGFE----LGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
LA YR E + V+ + +L+C ++ +K F A VL M RG NV
Sbjct: 90 LAFSFYRKMLETDTFINFVSLSGLLECYVQM--RKTGF-----AFGVLALMLKRGFAFNV 142
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
N+L+ LC+ + A+ L M P+ ++ +IR + LE+ E+ +
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
MK +G SL + + C +++ A+ MK G E + Y L+
Sbjct: 203 MKGSGCSWSL--VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 243 NRVDKANALFHEAQSRG 259
+D+ ALF E RG
Sbjct: 261 GELDRGKALFDEVLERG 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 11/198 (5%)
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M + GF V +N +L LCR L +A +L EM + +V ++N +I
Sbjct: 133 MLKRGFAFNVYNHNILLK---GLCRN----LECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
C+ ++ E AL+L + M GC + T+ +LI + +A +++E + MK G A
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
L Y + C ++ +F + G P TY+ L+ ++ +A+
Sbjct: 246 DL--VVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 251 LFHEAQSRGLAVTPKEYA 268
+F RG V P Y
Sbjct: 304 IFEFMIERG--VRPNVYT 319
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 11/216 (5%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ +++I C DG + +A + M + + YN +L LC + D
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG---GLCAKGDL--- 403
Query: 103 HSEAEKVLVEM--DYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
EA K+L M D +V ++N LI LCK + AL ++ + E + T
Sbjct: 404 -DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+L+ S +A + + E+ ++ + + D Y + C + A + M
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSD--TYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
+ +P + Y+ L+S L +D+A LF E Q
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 9/208 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D ++L+ G + +A L ++ Y AM+D C+ +
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG-------ML 510
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+ A+ +L +M + +V +N L+++LCK + A +LF M +P+ +F ++
Sbjct: 511 NVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIM 570
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I +A ++ + ++ M AG S D Y + + + ++ A+ F M
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGL--SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS 628
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANAL 251
G EP D ++ + DK L
Sbjct: 629 GFEPDAHICDSVLKYCISQGETDKLTEL 656
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 12/244 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G+ D + +V +LC +G YA ++V+ + +P + + L++G C+ G L ++
Sbjct: 136 GIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQS 195
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + + G Y+ +L+ + R D EA K+L E+ +G N+ +
Sbjct: 196 LQFVERLMQKGLAPNAFTYSFLLEAAYKE-RGTD------EAVKLLDEIIVKGGEPNLVS 248
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+NVL+T CK +T+DA+ LF + G N ++ +L+R L R EE + ++ M
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI--KTYDLLMSKLGAH 242
S+ Y + L R E AL+V M + + +Y+ ++++L
Sbjct: 309 GGDRAPSV--VTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKE 366
Query: 243 NRVD 246
+VD
Sbjct: 367 GKVD 370
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 9/212 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ A L+ C +L++A R+ M G AY +++ +LC++ +
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVN---QLCKRGNV--- 157
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A +++ +M+ G P N T+N L+ LC + +L+ R+ + G PN T+
Sbjct: 158 -GYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSF 216
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ + Y+ +E +++D + G +L +Y LT C R + A+ +F + A
Sbjct: 217 LLEAAYKERGTDEAVKLLDEIIVKGGEPNL--VSYNVLLTGFCKEGRTDDAMALFRELPA 274
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
G + + +Y++L+ L R ++AN+L E
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAE 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + L+ C G + A +L +M G+ V YNA++ +C L
Sbjct: 137 IIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSL---- 192
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+++ + + + +G+ N T++ L+ K R T++A+KL + G PN ++
Sbjct: 193 ---NQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSY 249
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
VL+ + R ++ + + + GF A++ +Y L LC R E A + A M
Sbjct: 250 NVLLTGFCKEGRTDDAMALFRELPAKGFKANV--VSYNILLRCLCCDGRWEEANSLLAEM 307
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
P + TY++L++ L H R ++A + E
Sbjct: 308 DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE 341
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 70 EMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLI 129
+ GG + V +L +C+ R K +A +V+ M G+ + + L+
Sbjct: 96 SLVTGGHKPNVAHSTQLLYDLCKANRLK-------KAIRVIELMVSSGIIPDASAYTYLV 148
Query: 130 TNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFG 189
LCK A++L +M + G N T+ L+R L L + + ++R+ G
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208
Query: 190 ASLDKKAYYQFLTILCGIER-VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
+ Y FL ER + A+K+ + G EP + +Y++L++ R D A
Sbjct: 209 PN---AFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 249 NALFHEAQSRGLAVTPKEYAV 269
ALF E ++G Y +
Sbjct: 266 MALFRELPAKGFKANVVSYNI 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
+I C G A +L EM R GF+ Y+A++ +C + F E ++
Sbjct: 429 VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLC----LEGMFTGAMEVLSIM 484
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
E + V+ FN +I LCKIR+T+ A+++F M E PNETT+ +L+ +
Sbjct: 485 EESE--NCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHE 542
Query: 171 ARLEEGDEMIDRMK 184
LE E++D ++
Sbjct: 543 DELELAKEVLDELR 556
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P +A+ D+ + + +GK A ++ +M R + ++ N +L L R F +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLL---IGLVRYPSSFSI 185
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-GEWGCYPNETTFV 161
S A +V +M GV NV+TFNVL+ C K EDAL + RM E+ P+ T+
Sbjct: 186 -SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
+++++ + RL + E++ MK G ++ Y + C + ++ A ++ +MK
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVP--NRVTYNNLVYGYCKLGSLKEAFQIVELMK 302
Query: 222 ADGCEPGIKTYDLLMSKL 239
P + TY++L++ L
Sbjct: 303 QTNVLPDLCTYNILINGL 320
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 117/290 (40%), Gaps = 34/290 (11%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV--IFPDEAMCDMLIKGWCVD 58
ME D G+K ++ + + ++ LC + R VK+L + PD LIK +
Sbjct: 371 MEND-GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK---------- 108
G L A + EM + G ++ + N +LD +C+ + + L + A K
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489
Query: 109 -VLV-----------------EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
L+ EM + V TFN LI LC KTE A++ F + E
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE 549
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV 210
G P+++TF +I + R+E+ E + F D L LC
Sbjct: 550 SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP--DNYTCNILLNGLCKEGMT 607
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
E AL F + + E TY+ ++S ++ +A L E + +GL
Sbjct: 608 EKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 23/174 (13%)
Query: 25 GFASYAERMVKDLARVIFPDEA---------MCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
G Y AR +F D ++L+ G+C++GKLE+A G + R
Sbjct: 175 GLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA---LGMLERMV 231
Query: 76 FELGV----VAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
E V V YN +L + + R D +++L++M G+ N T+N L+
Sbjct: 232 SEFKVNPDNVTYNTILKAMSKKGRLSD-------LKELLLDMKKNGLVPNRVTYNNLVYG 284
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
CK+ ++A ++ M + P+ T+ +LI L A + EG E++D MKS
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 16/236 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G+ + + V+V C +G A ERMV + + PD + ++K G+L
Sbjct: 199 GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK--VNPDNVTYNTILKAMSKKGRL 256
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ + L +M + G V YN ++ C+L K+ F +++ M V +
Sbjct: 257 SDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF-------QIVELMKQTNVLPD 309
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+ T+N+LI LC + L+L M P+ T+ LI ++ E ++++
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHAL-KVFAMMKADGCEPGIKTYDLLM 236
+M++ G A ++ + L LC E+ E KV ++ G P I TY L+
Sbjct: 370 QMENDGVKA--NQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 12 GSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGE 70
+ ++ LC G A +LA + PD++ + +I G+C +G++E+A E
Sbjct: 522 STFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET--FNVL 128
+ F+ N +L+ +C+ EK L + R V+T +N +
Sbjct: 582 SIKHSFKPDNYTCNILLNGLCK----------EGMTEKALNFFNTLIEEREVDTVTYNTM 631
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I+ CK +K ++A L M E G P+ T+ I L + +L E DE++ + S F
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF-SGKF 690
Query: 189 GA 190
G+
Sbjct: 691 GS 692
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 9/210 (4%)
Query: 40 VIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP 99
V+ P+ L+ C GK++E R L + GFE V Y+ + + D
Sbjct: 202 VLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDA 261
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
+ E M +G+ R+V ++++LI L K E+AL L +M + G PN T
Sbjct: 262 LMQDRE-------MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLIT 314
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
+ +IR L + +LEE + +R+ S G +D+ Y + +C + A +
Sbjct: 315 YTAIIRGLCKMGKLEEAFVLFNRILSVGI--EVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
M+ G +P I TY+ +++ L RV +A+
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEAD 402
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 16 VVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
+++ LC +GF A + +R + + + LI G C G L EA RL +
Sbjct: 660 IIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENI 719
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
G V Y ++D LC++ L +AEK+L M +G+ N+ +N ++ CK
Sbjct: 720 GLVPSEVTYGILID---NLCKEG----LFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+ +TEDA+++ R P+ T +I+ + +EE + K A
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD--- 829
Query: 195 KAYYQFLTIL---CGIERVEHA 213
++ FL ++ C R+E A
Sbjct: 830 --FFGFLFLIKGFCTKGRMEEA 849
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 17/222 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + + ++ LC +G A R+ L + + P E +LI C +G +A
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L M G ++ YN+++D C+L + +D + S +M R P + T
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSR------KMMGRVTP-DAFT 797
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +I CK E+AL +F + + F+ LI+ R+EE ++ M
Sbjct: 798 VSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Query: 185 SAGFGASL---------DKKAYYQFLTILCGIERVEHALKVF 217
+ L + ++ FL LC RV A+K+
Sbjct: 858 VSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKIL 899
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 77 ELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIR 136
+ V+ Y +++ +C K+ FL+ +A + RGV N T+N LI LC+
Sbjct: 652 SMDVIDYTIIINGLC-----KEGFLV--KALNLCSFAKSRGVTLNTITYNSLINGLCQQG 704
Query: 137 KTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKA 196
+AL+LF + G P+E T+ +LI +L + + ++++D M S G ++
Sbjct: 705 CLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI--II 762
Query: 197 YYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
Y + C + + E A++V + P T ++ +++A ++F E +
Sbjct: 763 YNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFK 822
Query: 257 SRGLA 261
+ ++
Sbjct: 823 DKNIS 827
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 15/229 (6%)
Query: 18 VEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFE 77
VE LC + A+ + L I PDE +I+G+C G L EA +L M GF+
Sbjct: 188 VETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFD 247
Query: 78 LGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL-VEMDYRGVPRNVETFNVLITNLCKIR 136
+ + A +++ + +K+ F EA KV V + RG + + V+I LCK
Sbjct: 248 VDIEAGKKIMETLL----KKNQF---DEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNG 300
Query: 137 KTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKA 196
+ + A K+F M E G Y + T+ LI L R+ E +++ +++ D
Sbjct: 301 RIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVENP------DISI 354
Query: 197 YYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS-KLGAHNR 244
Y+ + L I+R A +VF M GCEP + TY +L+ LG R
Sbjct: 355 YHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRGR 403
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
M+ G NVET N + LCK + E+A +F ++ E+ P+E T+ +I+
Sbjct: 172 MNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEF-IKPDEITYRTMIQGFCDVGD 230
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF-AMMKADGCEPGIKT 231
L E ++ + M GF +D +A + + L + + A KVF M+ G +
Sbjct: 231 LIEAAKLWNLMMDEGF--DVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGF 288
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
Y +++ L + R+D A +F E + RG+ V +A
Sbjct: 289 YRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWA 325
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 12/213 (5%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
ML+ G+ G E A +L EM E V ++NA+L ++ D EA K
Sbjct: 129 MLLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVN-SKKLD------EAMKT 179
Query: 110 LVEMDYR-GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
E+ + G+ ++ T+N +I LC+ +D L +F + + G P+ +F L+ Y
Sbjct: 180 FKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFY 239
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ EGD + D MKS ++ ++Y + L ++ AL + +MK +G P
Sbjct: 240 RRELFVEGDRIWDLMKSKNLSPNI--RSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD 297
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+ TY+ L++ N +++ ++E + +GL
Sbjct: 298 VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 9/176 (5%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + +IK C G +++ + E+ + GFE ++++N +L+ E R++
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLE---EFYRRE--- 242
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L E +++ M + + N+ ++N + L + +K DAL L M G P+ T+
Sbjct: 243 -LFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTY 301
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
LI + LEE + + MK G D Y + +LC ++ A++V
Sbjct: 302 NALITAYRVDNNLEEVMKCYNEMKEKGLTP--DTVTYCMLIPLLCKKGDLDRAVEV 355
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 70 EMYRGGFELGVVAYNAMLDCVCELCRQK-DPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
++++ +LGVVA + + + C + DP +AEK+L EM+ +GV ++ T+N L
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDP----EKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I+ CK +AL + RM G PN T+ I + R+ E + +K
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD--- 301
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
+ + Y + C + ++ AL++ +M++ G PG+ TY+ ++ KL R+ +A
Sbjct: 302 DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Query: 249 NALFHEAQSRGL 260
N L E + +
Sbjct: 362 NRLLTEMSGKKI 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 30/266 (11%)
Query: 30 AERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDC 89
A R+ +++ + + LI G+C ++EA RL M GF GVV YN++L
Sbjct: 292 ATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRK 351
Query: 90 VCELCRQKDPFLLHSE----------------------------AEKVLVEMDYRGVPRN 121
+CE R ++ L +E A KV +M G+ +
Sbjct: 352 LCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLD 411
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+ ++ LI CK+ + E+A + M E G P T+ L+ Y + +E ++++
Sbjct: 412 MYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLE 471
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
+ G A D Y + +C +E+V++A +F M+ G + +
Sbjct: 472 EFEKRGLCA--DVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWR 529
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEY 267
+V +A+ALF +R L V K Y
Sbjct: 530 TGKVTEASALFDVMYNRRLMVNLKLY 555
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 103/274 (37%), Gaps = 43/274 (15%)
Query: 22 CSK-GFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELG 79
CSK G AE+++ ++ + +FPD + LI +C EA + M R G
Sbjct: 213 CSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPN 272
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
+V YN+ + R ++ L E + V N T+ LI C++ +
Sbjct: 273 IVTYNSFIHGFSREGRMREATRLFREIKD--------DVTANHVTYTTLIDGYCRMNDID 324
Query: 140 DALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM---------------- 183
+AL+L M G P T+ ++R L + R+ E + ++ M
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 184 -----------------KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
K G LD +Y + C + +E+A + M G
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFS 444
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
PG TY L+ N+ D+ L E + RGL
Sbjct: 445 PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G+ +++ VL+ +L K R T+ K+F +M + G N + VL+ + ++ E+
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
++++ M+ G D Y +++ C AL V M+ G P I TY+ +
Sbjct: 223 EKLLSEMEEKGVFP--DIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFI 280
Query: 237 SKLGAHNRVDKANALFHEAQ 256
R+ +A LF E +
Sbjct: 281 HGFSREGRMREATRLFREIK 300
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 14/252 (5%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
E L K + E + ++R +F A LI + +G+ E + L M
Sbjct: 154 EGLLDKCLEVFDEMPSQGVSRSVFSYTA----LINAYGRNGRYETSLELLDRMKNEKISP 209
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
++ YN +++ + L + EM + G+ ++ T+N L++ C IR
Sbjct: 210 SILTYNTVINACARGGLDWEGLL------GLFAEMRHEGIQPDIVTYNTLLS-ACAIRGL 262
Query: 139 ED-ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAY 197
D A +F M + G P+ TT+ L+ + + RLE+ +++ M S G+ D +Y
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASG--GSLPDITSY 320
Query: 198 YQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQS 257
L ++ A+ VF M+A GC P TY +L++ G R D LF E +S
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 258 RGLAVTPKEYAV 269
Y +
Sbjct: 381 SNTDPDAATYNI 392
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 15/231 (6%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + L+ + G +EA + M GG + Y+ +++ +L R
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR----- 297
Query: 101 LLHSEAEKV---LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
EKV L EM G ++ ++NVL+ K ++A+ +FH+M GC PN
Sbjct: 298 -----LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
T+ VL+ Q+ R ++ ++ MKS+ D Y + + + + +F
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSS--NTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
M + EP ++TY+ ++ G + A + + + + K Y
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYT 461
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 16/259 (6%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARVIF--PDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
+V ++ +G + R+ K + R I+ P+E + ++I +G L++ + EM
Sbjct: 110 LVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPS 169
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
G V +Y A+++ R + + ++L M + ++ T+N +I N C
Sbjct: 170 QGVSRSVFSYTALINAYGRNGR-------YETSLELLDRMKNEKISPSILTYNTVI-NAC 221
Query: 134 KIR--KTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR-LEEGDEMIDRMKSAGFGA 190
E L LF M G P+ T+ L+ + A R L + EM+ R + G G
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC--AIRGLGDEAEMVFRTMNDG-GI 278
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
D Y + + R+E + M + G P I +Y++L+ + +A
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 251 LFHEAQSRGLAVTPKEYAV 269
+FH+ Q+ G Y+V
Sbjct: 339 VFHQMQAAGCTPNANTYSV 357
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 86/219 (39%), Gaps = 9/219 (4%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
PD ++L++ + G ++EA + +M G Y+ +L+ + R D
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD--- 370
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
++ +EM + T+N+LI + ++ + LFH M E P+ T+
Sbjct: 371 ----VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE 426
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
+I + + E+ +++ M + S KAY + E AL F M
Sbjct: 427 GIIFACGKGGLHEDARKILQYMTANDIVPS--SKAYTGVIEAFGQAALYEEALVAFNTMH 484
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
G P I+T+ L+ V ++ A+ G+
Sbjct: 485 EVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD A ++LI+ + G +E L +M E + Y ++ C + L
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA----CGKGG---L 437
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
H +A K+L M + + + + +I + E+AL F+ M E G P+ TF
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHS 497
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDK-----KAYYQFLTILCGIERVEHALKVF 217
L+ S + ++E + ++ R+ +G + D +AY Q + E A+K +
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQG-------GKFEEAVKTY 550
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQS 257
M+ C+P +T + ++S VD+ F E ++
Sbjct: 551 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKA 590
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 15/257 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
G + D + ++ +C++G AS R +K++ V PD ++LI+G +G LE A
Sbjct: 290 GFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLV--PDSVSYNILIRGCSNNGDLEMAF 347
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-EAEKVLV-EMDYRGVPRNVE 123
EM + G YN ++ + F+ + EA ++L+ E+ +G+ +
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGL---------FMENKIEAAEILIREIREKGIVLDSV 398
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+N+LI C+ + A L M G P + T+ LI L + + E DE+ +
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE-- 456
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
K G G D + C I ++ A + M P TY+ LM L
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 244 RVDKANALFHEAQSRGL 260
+ ++A L E + RG+
Sbjct: 517 KFEEARELMGEMKRRGI 533
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 13/255 (5%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEAR 65
+K + + +++ LC +G A+ + + I P + L++G+ + G++E AR
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
+ EM GF+ + YN +L +C R A +VL EM G+ + ++
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEGR----------ASEVLREMKEIGLVPDSVSY 330
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N+LI E A M + G P T+ LI L+ ++E + +I ++
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
G LD Y + C + A + M DG +P TY L+ L N+
Sbjct: 391 KGI--VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448
Query: 246 DKANALFHEAQSRGL 260
+A+ LF + +G+
Sbjct: 449 READELFEKVVGKGM 463
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 119/295 (40%), Gaps = 45/295 (15%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKG-----FASYAERMVKDLARVIFPDEAMCDMLIKGWCV 57
++ GL D S +++ + G FA Y + MVK + + P + LI G +
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFA-YRDEMVK---QGMVPTFYTYNTLIHGLFM 374
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSE------------ 105
+ K+E A L E+ G L V YN +++ C+ K F LH E
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 106 ----------------AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMG 149
A+++ ++ +G+ ++ N L+ C I + A L M
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494
Query: 150 EWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER 209
P++ T+ L+R L + EE E++ MK G K + + T++ G +
Sbjct: 495 MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI-----KPDHISYNTLISGYSK 549
Query: 210 ---VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+HA V M + G P + TY+ L+ L + + A L E +S G+
Sbjct: 550 KGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + +++ C+ G A ++K++ + I PD+ + L++G C +GK EEA
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R L GEM R G + ++YN ++ + K F++ EM G + T
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRD-------EMLSLGFNPTLLT 574
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
+N L+ L K ++ E A +L M G PN+++F +I ++
Sbjct: 575 YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 12/219 (5%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
D+L++ C ++EA M GF N +L + L R ++ ++ +++ +
Sbjct: 159 DLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYR 218
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ ++ NV TFN++I LCK K + A M +G P T+ L++
Sbjct: 219 MEIK-------SNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
R+E +I MKS GF D + Y L+ +C R L+ MK G P
Sbjct: 272 LRGRIEGARLIISEMKSKGFQP--DMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPD 326
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+Y++L+ + ++ A A E +G+ T Y
Sbjct: 327 SVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTY 365
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 18/235 (7%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKG-----FASYAERMVKDLARVIFPDEAMCDMLIKGWCV 57
R+ G+ D + +++ C G FA + E M I P + LI C
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDG----IQPTQFTYTSLIYVLCR 444
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
K EA L ++ G + +V N ++D C + F L L EMD
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSL-------LKEMDMMS 497
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
+ + T+N L+ LC K E+A +L M G P+ ++ LI + +
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 557
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
+ D M S GF +L Y L L + E A ++ MK++G P ++
Sbjct: 558 MVRDEMLSLGFNPTL--LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
F++L+ C++R ++A++ F+ M E G YP T ++ L + R+E M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+++ + + +LC +++ A +M+ G +P I TY+ L+ R
Sbjct: 218 RMEIKSNV--YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 245 VDKANALFHEAQSRGLAVTPKEY 267
++ A + E +S+G + Y
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTY 298
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 125/269 (46%), Gaps = 12/269 (4%)
Query: 2 ERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGK 60
ER ++ DR + +++ L ++A ++ D+ P DE M +LI+ + G
Sbjct: 141 ERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGI 200
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
++E+ ++ +M G E + +YN++ + R + A++ +M GV
Sbjct: 201 VQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR-------YMMAKRYFNKMVSEGVEP 253
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
T+N+++ + E AL+ F M G P++ TF +I + +++E +++
Sbjct: 254 TRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLF 313
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
MK G S+ +Y + ++RV+ L++F M++ G EP TY L+ L
Sbjct: 314 VEMKGNKIGPSV--VSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLC 371
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKEYAV 269
++ +A + ++ +A PK+ ++
Sbjct: 372 DAGKMVEAKNILKNMMAKHIA--PKDNSI 398
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 12/249 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKL 61
+D G++R S + + + +G A+R K ++ + P ++++ G+ + +L
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
E A R +M G +N M++ C F EAEK+ VEM + +
Sbjct: 272 ETALRFFEDMKTRGISPDDATFNTMINGFCR-------FKKMDEAEKLFVEMKGNKIGPS 324
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V ++ +I + + +D L++F M G PN TT+ L+ L A ++ E ++
Sbjct: 325 VVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILK 384
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS---K 238
M + A D + + L + A +V M Y +L+ K
Sbjct: 385 NMMAKHI-APKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCK 443
Query: 239 LGAHNRVDK 247
A+NR K
Sbjct: 444 ASAYNRAIK 452
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 105/253 (41%), Gaps = 11/253 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV--IFPDEAMCDMLIKGWCVDGKL 61
D+G+KR SL ++ L M K+ I P+ C++L+K C +
Sbjct: 148 DFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
E A ++ E+ G +V Y +L + A++VL EM RG +
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES-------AKRVLEEMLDRGWYPD 260
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
T+ VL+ CK+ + +A + M + PNE T+ V+IR+L + + E M D
Sbjct: 261 ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFD 320
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M F D + + LC +V+ A ++ M + C P L+ L
Sbjct: 321 EMLERSFMP--DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCK 378
Query: 242 HNRVDKANALFHE 254
RV +A LF E
Sbjct: 379 EGRVTEARKLFDE 391
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD A+ LI C +G++ EAR+L E +G ++ YN ++ +CE
Sbjct: 364 PDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP-SLLTYNTLIAGMCEKGEL------ 416
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+EA ++ +M R N T+NVLI L K ++ +++ M E GC+PN+TTF++
Sbjct: 417 -TEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLI 475
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCG 206
L L + + E+ +++ A +DK+++ FL G
Sbjct: 476 LFEGLQKLGKEEDAMKIVSM---AVMNGKVDKESWELFLKKFAG 516
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 11/255 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + + ++ ++G A+R++++ L R +PD +L+ G+C G+ EA
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ +M + E V Y M+ LC++K EA + EM R +
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRA---LCKEKK----SGEARNMFDEMLERSFMPDSSL 333
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+I LC+ K ++A L+ +M + C P+ LI L + R+ E ++ D +
Sbjct: 334 CCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE 393
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ L Y + +C + A +++ M C+P TY++L+ L +
Sbjct: 394 KGSIPSLL---TYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGN 450
Query: 245 VDKANALFHEAQSRG 259
V + + E G
Sbjct: 451 VKEGVRVLEEMLEIG 465
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 8/210 (3%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
L++ + + G+ E + R+ + G + V + N +L+ + + R L+H+ +
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFD---LVHAMFKN-- 180
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ G+ N+ T N+L+ LCK E A K+ + G PN T+ ++
Sbjct: 181 -SKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
+E +++ M G+ D Y + C + R A V M+ + EP
Sbjct: 240 GDMESAKRVLEEMLDRGWYP--DATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
TY +++ L + +A +F E R
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSF 327
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 114/263 (43%), Gaps = 19/263 (7%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKL 61
+ YG++ D + V ++KLC GF A ++ L I D +I G+C GK
Sbjct: 298 KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
EEA +L ++ + Y++ L +C D A + E+ G+ +
Sbjct: 358 EEAIKL---IHSFRLRPNIFVYSSFLS---NICSTGDML----RASTIFQEIFELGLLPD 407
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+ +I C + +T+ A + F + + G P+ TT +LI + + + + + +
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR 467
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM---MKADGCEPGIKTYDLLMSK 238
MK+ G LD Y ++ G + KVF + M++ G P + TY++L+
Sbjct: 468 NMKTEGL--KLDVVTYNN---LMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 239 LGAHNRVDKANALFHEAQSRGLA 261
+ +D+AN + E RG
Sbjct: 523 MVVRGYIDEANEIISELIRRGFV 545
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 13/264 (4%)
Query: 5 YGLKRDRG-SLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
+G+ RG + ++ E L G E + L+R + A+ + I+ +C DG ++
Sbjct: 230 FGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDK 289
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
L M G +VA+ +D +C K FL EA VL ++ G+ ++
Sbjct: 290 GWELLMGMKHYGIRPDIVAFTVFIDKLC-----KAGFL--KEATSVLFKLKLFGISQDSV 342
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+ + +I CK+ K E+A+KL H + PN + + ++ + + +
Sbjct: 343 SVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEI 399
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
G D Y + C + R + A + F + G P + T +L+
Sbjct: 400 FELGLLP--DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFG 457
Query: 244 RVDKANALFHEAQSRGLAVTPKEY 267
+ A ++F ++ GL + Y
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTY 481
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD A ++LI V G ++EA + E+ R GF +A+ ++ + ++ F
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+L D R P +V T + L+ CK ++ E A+ LF+++ + G P+ +
Sbjct: 569 ILW------FYMADLRMKP-DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAG 187
LI +E+ E+I M G
Sbjct: 622 NTLIHGYCSVGDIEKACELIGLMVQRG 648
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 114/263 (43%), Gaps = 19/263 (7%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKL 61
+ YG++ D + V ++KLC GF A ++ L I D +I G+C GK
Sbjct: 298 KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
EEA +L ++ + Y++ L +C D A + E+ G+ +
Sbjct: 358 EEAIKL---IHSFRLRPNIFVYSSFLS---NICSTGDML----RASTIFQEIFELGLLPD 407
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+ +I C + +T+ A + F + + G P+ TT +LI + + + + + +
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR 467
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM---MKADGCEPGIKTYDLLMSK 238
MK+ G LD Y ++ G + KVF + M++ G P + TY++L+
Sbjct: 468 NMKTEGL--KLDVVTYNN---LMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 239 LGAHNRVDKANALFHEAQSRGLA 261
+ +D+AN + E RG
Sbjct: 523 MVVRGYIDEANEIISELIRRGFV 545
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 13/264 (4%)
Query: 5 YGLKRDRG-SLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
+G+ RG + ++ E L G E + L+R + A+ + I+ +C DG ++
Sbjct: 230 FGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDK 289
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
L M G +VA+ +D +C K FL EA VL ++ G+ ++
Sbjct: 290 GWELLMGMKHYGIRPDIVAFTVFIDKLC-----KAGFL--KEATSVLFKLKLFGISQDSV 342
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+ + +I CK+ K E+A+KL H + PN + + ++ + + +
Sbjct: 343 SVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEI 399
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
G D Y + C + R + A + F + G P + T +L+
Sbjct: 400 FELGLLP--DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFG 457
Query: 244 RVDKANALFHEAQSRGLAVTPKEY 267
+ A ++F ++ GL + Y
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTY 481
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD A ++LI V G ++EA + E+ R GF +A+ ++ + ++ F
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+L D R P +V T + L+ CK ++ E A+ LF+++ + G P+ +
Sbjct: 569 ILW------FYMADLRMKP-DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAG 187
LI +E+ E+I M G
Sbjct: 622 NTLIHGYCSVGDIEKACELIGLMVQRG 648
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G +EE +RL EM + +N +++ C+L EA++ + + G
Sbjct: 134 GLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYV-------VEAKQYVTWLIQAGC 186
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+ T+ IT C+ ++ + A K+F M + GC+ NE ++ LI L++A +++E
Sbjct: 187 DPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALS 246
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
++ +MK ++ + Y + LCG + A+ +F M G +P Y +L+
Sbjct: 247 LLVKMKDDNCCPNV--RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQS 304
Query: 239 LGAHNRVDKANALFHEAQSRGL 260
+ + +D+A+ L GL
Sbjct: 305 FCSGDTLDEASGLLEHMLENGL 326
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 14/233 (6%)
Query: 29 YAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
Y E M++DL + PD + L+ G+C G + EA++ + + G + Y +
Sbjct: 143 YTE-MLEDL---VSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSF-- 196
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+ CR+K+ A KV EM G RN ++ LI L + +K ++AL L +M
Sbjct: 197 -ITGHCRRKEV----DAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKM 251
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
+ C PN T+ VLI +L + + E + +M +G D Y + C +
Sbjct: 252 KDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP--DDCMYTVLIQSFCSGD 309
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
++ A + M +G P + TY+ L+ N V KA L + + L
Sbjct: 310 TLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLV 361
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 11/253 (4%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D + +V C G+ A++ V L + PD I G C +++ A ++
Sbjct: 154 DIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVF 213
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
EM + G V+Y ++ + E ++ D EA +LV+M NV T+ VL
Sbjct: 214 KEMTQNGCHRNEVSYTQLIYGLFE-AKKID------EALSLLVKMKDDNCCPNVRTYTVL 266
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I LC + +A+ LF +M E G P++ + VLI+S L+E +++ M G
Sbjct: 267 IDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGL 326
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
++ Y + C + V A+ + + M P + TY+ L++ + +D A
Sbjct: 327 MPNV--ITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Query: 249 NALFHEAQSRGLA 261
L + GL
Sbjct: 384 YRLLSLMEESGLV 396
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
V+++ LC G S A + K ++ I PD+ M +LI+ +C L+EA L M
Sbjct: 265 VLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN 324
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
G V+ YNA++ C+ K LL E+ LV ++ T+N LI C
Sbjct: 325 GLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLVP--------DLITYNTLIAGQCS 376
Query: 135 IRKTEDALKLFHRMGEWGCYPNETT 159
+ A +L M E G PN+ T
Sbjct: 377 SGNLDSAYRLLSLMEESGLVPNQRT 401
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 15/234 (6%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R I E ++LI G+ +GK+EEARR G+M R GF + ++N +++ C+
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQG---- 322
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
L +A V EM G+ T+N+ I LC + +DA +L M P+
Sbjct: 323 ---LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVV 375
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
++ L+ + + E + D +++ S+ Y + LC +E A ++
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSI--VTYNTLIDGLCESGNLEGAQRLKE 433
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDPR 272
M P + TY L+ + + A ++ E +G + P YA R
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG--IKPDGYAYTTR 485
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 23/263 (8%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +++ LC G A+R+ +++ ++IFPD L+KG+ +G L A + EM
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 470
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
R G + AY L F LH E +V D+ ++ +NV I
Sbjct: 471 LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEE----MVATDHHA--PDLTIYNVRIDG 524
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
LCK+ A++ ++ G P+ T+ +IR + + + + D M
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM-------- 576
Query: 192 LDKKAYYQFLTILCGIE------RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
L K+ Y +T I R+E A + MK G P + T++ L+ + +
Sbjct: 577 LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI 636
Query: 246 DKANALFHEAQSRGLAVTPKEYA 268
D+A + + G + P +Y+
Sbjct: 637 DEAYRYLCKMEEEG--IPPNKYS 657
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
V ++ LC G A + + RV + PD +I+G+ +G+ + AR L EM R
Sbjct: 519 NVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR 578
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
V+ Y ++ + R + F +E +K RGV NV T N L+ +C
Sbjct: 579 KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKK-------RGVRPNVMTHNALLYGMC 631
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
K ++A + +M E G PN+ ++ +LI
Sbjct: 632 KAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + V+ G A + ++ R ++P +LI G G+LE+A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + EM + G V+ +NA+L +C+ EA + L +M+ G+P N +
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI-------DEAYRYLCKMEEEGIPPNKYS 657
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
+ +LI+ C K E+ +KL+ M + P+ T L + L
Sbjct: 658 YTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 16/242 (6%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
V +K ++ F E+M++ + P C++++K + +A + M G
Sbjct: 177 VYTKKSMAEKFLLSFEKMIR---KGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHG 233
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
V+ +N MLD C + +K+ +EM R + + T+N+LI K
Sbjct: 234 IMPTVITFNTMLDS----CFKAGDL---ERVDKIWLEMKRRNIEFSEVTYNILINGFSKN 286
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
K E+A + M G +F LI + ++ + D M +AG +
Sbjct: 287 GKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPT--TS 344
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
Y ++ LC R++ A ++ + M A P + +Y+ LM + +A+ LF +
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDL 400
Query: 256 QS 257
++
Sbjct: 401 RA 402
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 10/243 (4%)
Query: 17 VVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
++ C G AE + ++++ PD ++L+ + + L+ A + EM R G
Sbjct: 226 LISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSG 285
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
+L +YN +L CR P ++ K EM+ RG +V +++ LI C+
Sbjct: 286 IQLDAYSYNQLLK---RHCRVSHPDKCYNFMVK---EMEPRGFC-DVVSYSTLIETFCRA 338
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
T A +LF M + G N T+ LI++ + +++D+M G S D+
Sbjct: 339 SNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTE--LGLSPDRI 396
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
Y L LC V+ A VF M P +Y+ L+S L RV +A LF +
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 256 QSR 258
+ +
Sbjct: 457 KGK 459
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 10/218 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
I G C K + L +M GF + A+N LD +C K F A +
Sbjct: 85 FISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCR--ENKVGF-----AVQTF 137
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M RG +V ++ +LI L + K DA+++++ M G P+ L+ L A
Sbjct: 138 FCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHA 197
Query: 171 ARLEEGDEMI-DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
+++ EM+ + +KSA L Y ++ C R+E A + + M GCEP +
Sbjct: 198 RKVDLAYEMVAEEIKSA--RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL 255
Query: 230 KTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
TY++L++ +N + +A + E G+ + Y
Sbjct: 256 VTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSY 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 94/230 (40%), Gaps = 16/230 (6%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD +LI G GK+ +A + M R G A A+ V LC + L
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL---VVGLCHARKVDLA 203
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ E V E+ V + +N LI+ CK + E A L M + GC P+ T+ V
Sbjct: 204 Y---EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ Y L+ + ++ M +G LD +Y Q L C RV H K + M
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGI--QLDAYSYNQLLKRHC---RVSHPDKCYNFMVK 315
Query: 223 DGCEP----GIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+ EP + +Y L+ + KA LF E + +G+ + Y
Sbjct: 316 E-MEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 10/200 (5%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D S ++E C A R+ +++ + + + LIK + +G A++L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
+M G + Y +LD LC+ + +A V +M + + ++N L
Sbjct: 384 DQMTELGLSPDRIFYTTILD---HLCKSGNV----DKAYGVFNDMIEHEITPDAISYNSL 436
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I+ LC+ + +A+KLF M C P+E TF +I L + +L ++ D+M GF
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Query: 189 GASLDKKAYYQFLTILCGIE 208
+LD+ + C +
Sbjct: 497 --TLDRDVSDTLIKASCSMS 514
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 11/269 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
+G+K S ++ LC + S A+ + I D +++I GW G++EE
Sbjct: 214 SFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEE 273
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
++ EM GF ++Y+ +++ + R D ++ + ++G +
Sbjct: 274 MEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSV-------EIFDNIKHKGNVPDAN 326
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+N +I N R +++++ + RM + C PN T+ L+ L + ++ + E+ + M
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEM 386
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
S G + FL LC A+ ++ + GC Y LL+ +L
Sbjct: 387 LSRGVLPT--TGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFG 444
Query: 244 RVDKANALFHEAQSRGLA--VTPKEYAVD 270
+ ++ E Q G V EY VD
Sbjct: 445 KCGMLLNVWDEMQESGYPSDVEVYEYIVD 473
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 10/256 (3%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ V+VE +C ++ A +++D+A +PD + L+ C G LEE + +
Sbjct: 246 TYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHI 305
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G EL V YN +L +C E E++L M V T+N+LI
Sbjct: 306 LSHGLELNTVTYNTLLHSLCS-------HEYWDEVEEILNIMYQTSYCPTVITYNILING 358
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
LCK R A+ F++M E C P+ T+ ++ ++ + +++ E++ +K+
Sbjct: 359 LCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPG 418
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
L Y + L ++ AL+++ M G P T L+ N V++A +
Sbjct: 419 L--ITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQV 476
Query: 252 FHEAQSRGLAVTPKEY 267
E +RG + Y
Sbjct: 477 LKETSNRGNGIRGSTY 492
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 26/241 (10%)
Query: 31 ERMVKDLARVIFPDEAMC-----------------DMLIKGWCVDGKLEEARRLAGEMYR 73
+V+ LAR+ D+AMC +M+I C G + A L +M
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSL 202
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
G V+ YN ++ C+ + + +A + + G P + T+ VL+ +C
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAE-------QAIRFWKDQLQNGCPPFMITYTVLVELVC 255
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ + A+++ M GCYP+ T+ L+ + LEE +I + S G L+
Sbjct: 256 RYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGL--ELN 313
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y L LC E + ++ +M P + TY++L++ L + +A F+
Sbjct: 314 TVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFY 373
Query: 254 E 254
+
Sbjct: 374 Q 374
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 10/230 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLE 62
+GL+ + + ++ LCS + E ++ + + + P ++LI G C L
Sbjct: 307 SHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLS 366
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
A +M +V YN +L + K+ + +A ++L + P +
Sbjct: 367 RAIDFFYQMLEQKCLPDIVTYNTVLGAM-----SKEGMV--DDAIELLGLLKNTCCPPGL 419
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N +I L K + AL+L+H+M + G +P++ T LI +A +EE +++
Sbjct: 420 ITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKE 479
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
+ G G + Y + LC + +E A++V +M GC+P Y
Sbjct: 480 TSNRGNG--IRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIY 527
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 12/248 (4%)
Query: 8 KRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEARR 66
+ D + ++ LCS G + A ++V+ +AR P C L++G +L++A
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVE-MDYRGVPRNVETF 125
+ M G + YN ++ LC++ H VL+E M G P +V T+
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIG---NLCKKG-----HIRTALVLLEDMSLSGSPPDVITY 212
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N +I + E A++ + + GC P T+ VL+ + + E+++ M
Sbjct: 213 NTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDM-- 270
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
A G D Y + C +E V + + G E TY+ L+ L +H
Sbjct: 271 AVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYW 330
Query: 246 DKANALFH 253
D+ + +
Sbjct: 331 DEVEEILN 338
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 87/225 (38%), Gaps = 9/225 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL--GVVAYNAMLDCVCEL-----CR 95
PD + +I C G ++AR L +M GF Y ++ C CR
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 96 QKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
+ + EA ++ EM +RG +V T+N LI CK + AL+LF M GC P
Sbjct: 258 KAIRRRMW-EANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
N+ T+ IR +E EM+ MK G G Y + L R A
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVP-GSSTYTPLIHALVETRRAAEARD 375
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ M G P TY L+ L + + H+ G+
Sbjct: 376 LVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGI 420
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
++AL F+RM E+ C P+ + +I +L + ++ ++D+M+ GF D Y
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 199 QFLTILC--GIE---------RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
++ C G++ R+ A ++F M G P + TY+ L+ NR+ +
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 248 ANALFHEAQSRGLAVTPKEYAVDPRY 273
A LF + +++G Y RY
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRY 327
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 115/306 (37%), Gaps = 54/306 (17%)
Query: 6 GLKRDRGSLKVVVEKLCSKG-FASYAERMVKDLARVIFPDEAMCDMLIKGWCVD----GK 60
G + D +L V+ LC G F R + LA PDE C+++I
Sbjct: 85 GYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVST 144
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
L RL G ++ F + YN +++ +C + R D A K++ +M RG
Sbjct: 145 LGVIHRLIG--FKKEFVPSLTNYNRLMNQLCTIYRVID-------AHKLVFDMRNRGHLP 195
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG---- 176
+V TF LI C+IR+ E A K+F M G PN T VLI + +E G
Sbjct: 196 DVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLM 255
Query: 177 --------DEMIDRMKSAGFGASLDKK--------------------------AYYQFLT 202
+E MK+A F +D AY +
Sbjct: 256 KELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMID 315
Query: 203 ILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
LC R A ++ +MK+ G +P +Y+ ++ L +A L E
Sbjct: 316 SLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSE--FEF 373
Query: 263 TPKEYA 268
P EY
Sbjct: 374 FPSEYT 379
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 12/253 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GLK R S ++ LC G A +++++ + FP E +L++ C + +A
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA 396
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R + M R YN L LC +P +E VLV M + T
Sbjct: 397 RNVLELMLRKEGADRTRIYNIYLR---GLCVMDNP----TEILNVLVSMLQGDCRPDEYT 449
Query: 125 FNVLITNLCKIRKTEDALKLFHRM--GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
N +I LCK+ + +DA+K+ M G++ C P+ T ++ L R EE ++++R
Sbjct: 450 LNTVINGLCKMGRVDDAMKVLDDMMTGKF-CAPDAVTLNTVMCGLLAQGRAEEALDVLNR 508
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+ AY + L + + + A+ VF ++ TY +++ L
Sbjct: 509 VMPEN-KIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVT 567
Query: 243 NRVDKANALFHEA 255
N+VD A + +
Sbjct: 568 NKVDMAKKFWDDV 580
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 16/258 (6%)
Query: 17 VVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+++ LC A R+V + ++ + P + +I G C DG A +L E
Sbjct: 313 MIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFE 372
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
F Y +++ LC++ D +A VL M + +N+ + LC +
Sbjct: 373 FFPSEYTYKLLME---SLCKELDT----GKARNVLELMLRKEGADRTRIYNIYLRGLCVM 425
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
+ L + M + C P+E T +I L + R+++ +++D M + F A
Sbjct: 426 DNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAP---- 481
Query: 196 AYYQFLTILCGI---ERVEHALKVFA-MMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
T++CG+ R E AL V +M + +PG+ Y+ ++ L ++ D+A ++
Sbjct: 482 DAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSV 541
Query: 252 FHEAQSRGLAVTPKEYAV 269
F + + + YA+
Sbjct: 542 FGQLEKASVTADSTTYAI 559
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 10/226 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + D L++ +G + A + + GF + V A N + C+ + + D F
Sbjct: 148 PD--VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNV-NEIDRFW- 203
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
KV EMD G NV TFN++I + CK K +AL +F+RM + G +PN +F +
Sbjct: 204 -----KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNM 258
Query: 163 LIRSLYQAARLEEGDEMIDRMK-SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
+I + + +++ +M +G S + Y + C R++ A ++ M
Sbjct: 259 MIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMV 318
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
G + +TY L+ G D+A L E S+GL V Y
Sbjct: 319 KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIY 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 109/268 (40%), Gaps = 24/268 (8%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
++ DR + +VV LC G+ A + ++ ++ +C + L+ + D KL A
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACA 450
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR---- 120
++ G M G L +++ ++D +L + E+ L E+ Y G+ +
Sbjct: 451 DQILGSMLVQGLSLDAISFGTLID----------GYLKEGKLERAL-EI-YDGMIKMNKT 498
Query: 121 -NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
N+ +N ++ L K A + + M + T+ L+ + +EE D++
Sbjct: 499 SNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDI 554
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+ +M+ S+ + + LC E A +V M G P TY L++
Sbjct: 555 LSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEY 267
H +K L +G VTP E+
Sbjct: 615 SKHRSQEKVVELHDYLILQG--VTPHEH 640
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 7/206 (3%)
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCV-CELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
LEEAR L GEMYR E+ Y ++ V EL + + S+A V + R
Sbjct: 136 LEEAR-LYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCK 194
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRM-GEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
T+N +I L + + E +++ M E C+P+ T+ LI S + R +
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+ D MK + +K Y L I + +VE AL +F MK GC P + TY L+
Sbjct: 255 LFDEMKDNCMQPT--EKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKG 312
Query: 239 LGAHNRVDKANALFHEAQSRGLAVTP 264
LG RVD+A + + GL TP
Sbjct: 313 LGKAGRVDEAYGFYKDMLRDGL--TP 336
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 26/255 (10%)
Query: 22 CSKGFASYAERMVKDLARVIFPDEAMC---DMLIKGWCVD--------------GKLEEA 64
CS +Y E ++K L + DEA DML G D G++EE
Sbjct: 299 CSPTVYTYTE-LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ EM VV+YN ++ + E SE +M V + T
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHV------SEVSSWFDKMKADSVSPSEFT 411
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+++LI CK + E AL L M E G P + LI +L +A R E +E+ +K
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
FG ++ + Y + ++ A+ +F MK G P + Y+ LMS +
Sbjct: 472 E-NFG-NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 245 VDKANALFHEAQSRG 259
+++AN+L + + G
Sbjct: 530 INEANSLLRKMEENG 544
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 43/225 (19%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P E + L+ + GK+E+A L EM R G V Y ++ + + R + +
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGF 325
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ + M G+ +V N L+ L K+ + E+ +F MG W C P ++
Sbjct: 326 YKD-------MLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT 378
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+I++L+++ KA+ V F MKA
Sbjct: 379 VIKALFES------------------------KAH------------VSEVSSWFDKMKA 402
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
D P TY +L+ NRV+KA L E +G P Y
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAY 447
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 19/236 (8%)
Query: 36 DLARVIF---------PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAM 86
DLAR IF P+ +LI G+ + + A + +M FE V YN +
Sbjct: 501 DLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTI 560
Query: 87 LDCVCELCRQKDPFLLHSEAEKVLVEM-DYRGVPRNVETFNVLITNLCKIRKTEDALKLF 145
++ +C++ + S+A+++L + + + ++N +I K+ T+ A++ +
Sbjct: 561 INGLCKVGQT-------SKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETY 613
Query: 146 HRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILC 205
M E G PN TF LI ++ R++ EM MKS LD AY + C
Sbjct: 614 REMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMEL--KLDLPAYGALIDGFC 671
Query: 206 GIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
++ A +F+ + G P + Y+ L+S ++D A L+ + + G++
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 10/223 (4%)
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
MC+ + +C GK++ A M + G E VV YN M+ CR K+ L A
Sbjct: 451 MCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM---LAHCRMKNMDL----A 503
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
+ EM +G+ N T+++LI K + ++A + ++M NE + +I
Sbjct: 504 RSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIING 563
Query: 167 LYQAARLEEGDEMIDRM-KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGC 225
L + + + EM+ + K + S+ +Y + + + A++ + M +G
Sbjct: 564 LCKVGQTSKAKEMLQNLIKEKRY--SMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK 621
Query: 226 EPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
P + T+ L++ NR+D A + HE +S L + Y
Sbjct: 622 SPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 24/226 (10%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVC---ELCRQKDPFLLHSEAE 107
+I + +G +EEA R+ EM G + V+A ++++ C EL + D F
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLF------- 368
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
M+ G+ + F+V++ CK + E A++ + RM P+ +I+
Sbjct: 369 ---NRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGC 425
Query: 168 YQA----ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
+A A LE ++ + + GF + + + C +V+ A MM+
Sbjct: 426 LKAESPEAALEIFNDSFESWIAHGFMCN-------KIFLLFCKQGKVDAATSFLKMMEQK 478
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G EP + Y+ +M +D A ++F E +GL Y++
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAG 69
D ++ LC + + A + L PD ++L+ GW K E
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW----KSSEEAEAFF 234
Query: 70 EMYRG-GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
E +G G + VV YN+++D C KD + +A K++ +M +V T+ +
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYC-----KDREI--EKAYKLIDKMREEEETPDVITYTTV 287
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I L I + + A ++ M E+GCYP+ + IR+ A RL + D+++D M G
Sbjct: 288 IGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGL 347
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
S + Y F +L + + +++ M + C P ++ L+ H +VD A
Sbjct: 348 --SPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMA 405
Query: 249 NALFHEAQSRGLA 261
L+ + +G
Sbjct: 406 MRLWEDMVVKGFG 418
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 12/208 (5%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD +I G + G+ ++AR + EM G V AYNA + C R D
Sbjct: 279 PDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGD---- 334
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A+K++ EM +G+ N T+N+ L + +L+ RM C PN + +
Sbjct: 335 ---ADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMF 391
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI+ + +++ + + M GFG+ L +VE A K M
Sbjct: 392 LIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLA--KVEEAEKCLLEMVE 449
Query: 223 DGCEP---GIKTYDLLMSKLGAHNRVDK 247
G P K LLM H+ V+
Sbjct: 450 KGHRPSNVSFKRIKLLMELANKHDEVNN 477
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
++++ D+LI+ + KL EA + GF + + A NA++ + + + + ++
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
E + GV NV T N+++ LCK K E ++ E G YP+ T+ L
Sbjct: 224 QEISR-------SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I + +EE E+++ M GF + Y + LC + E A +VFA M
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGV--YTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
G P TY L+ + V + +F + +SR
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 18/261 (6%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV----IFPDEAMCDMLIKGWCVDGKLEEARRLA 68
+L ++V LC G E++ L++V ++PD + LI + G +EEA L
Sbjct: 237 TLNIMVNALCKDG---KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
M GF GV YN +++ +C+ + + A++V EM G+ + T+ L
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGK-------YERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
+ CK + K+F M P+ F ++ ++ L++ + +K AG
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
D Y + C + A+ + M GC + TY+ ++ L + +A
Sbjct: 407 IP--DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 249 NALFHEAQSRGLAVTPKEYAV 269
+ LF+E R A+ P Y +
Sbjct: 465 DKLFNEMTER--ALFPDSYTL 483
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 10/259 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + + ++ + C KG E++ D+ +R + PD ++ + G L++A
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ G V Y ++ CR+ + S A + EM +G +V T
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQ---GYCRKG----MISVAMNLRNEMLQQGCAMDVVT 447
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N ++ LCK + +A KLF+ M E +P+ T +LI + L+ E+ +MK
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
LD Y L + ++ A +++A M + P +Y +L++ L +
Sbjct: 508 EKRI--RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 245 VDKANALFHEAQSRGLAVT 263
+ +A ++ E S+ + T
Sbjct: 566 LAEAFRVWDEMISKNIKPT 584
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 121/308 (39%), Gaps = 55/308 (17%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKL 61
++ G+ D + ++ SKG A ++ + F P + +I G C GK
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV--- 118
E A+ + EM R G Y ++L E C++ D E EKV +M R V
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLL---MEACKKGDVV----ETEKVFSDMRSRDVVPD 374
Query: 119 ---------------------------------PRNVETFNVLITNLCKIRKTEDALKLF 145
P NV + +LI C+ A+ L
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV-IYTILIQGYCRKGMISVAMNLR 433
Query: 146 HRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTIL- 204
+ M + GC + T+ ++ L + L E D++ + M +L +Y LTIL
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER----ALFPDSYT--LTILI 487
Query: 205 ---CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
C + +++A+++F MK + TY+ L+ G +D A ++ + S+ +
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 262 VTPKEYAV 269
TP Y++
Sbjct: 548 PTPISYSI 555
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
S ++V LCSKG + A R+ + +++ I P +C+ +IKG+C G + +M
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
GF ++YN ++ F L + E+ + G+ +V T+N ++
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE-----EQGGLVPDVFTYNSILHG 666
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFG 189
C+ + ++A + +M E G P+ +T+ +I L E + D M GF
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + LI G + L +L EM G + +YN ++ C +L R
Sbjct: 79 IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR----- 133
Query: 101 LLHSEAEKVLVE-MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
H EA K+L E + G+ ++T+N+L+ LCK T++A++LF + + P T
Sbjct: 134 --HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMT 190
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
+ +LI L ++ R+ D M+ +K +G+ + + Y L + +R+E L++F
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGY--TPNAVTYTTMLKMYFKTKRIEKGLQLFLK 248
Query: 220 MKADG 224
MK +G
Sbjct: 249 MKKEG 253
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 7/189 (3%)
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M RG + ++ + V LC+ ++ AE +L++ GV +V T+N LI
Sbjct: 1 MVRGLMKFPGISTKLLNISVNSLCKFRNL----ERAETLLIDGIRLGVLPDVITYNTLIK 56
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
+ ++A + RM E G P+ TT+ LI + L ++ D M +G
Sbjct: 57 GYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGL-- 114
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAM-MKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
S D +Y ++ + R A K+ + G PGI TY++L+ L D A
Sbjct: 115 SPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAI 174
Query: 250 ALFHEAQSR 258
LF +SR
Sbjct: 175 ELFKHLKSR 183
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFE---LGVVAYNAMLDCVCELCRQKDP 99
P E +LIK +C+ G +E A + EM +GV YNA ++ L ++K
Sbjct: 210 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIE---GLMKRKGN 266
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
EA V M ET+N++I K K+ + KL+ M C PN T
Sbjct: 267 ---TEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 323
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH---ALKV 216
+ L+ + + E+ +E+ ++++ G + Y + ++ R + A ++
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDV-----YVYNALMESYSRAGYPYGAAEI 378
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
F++M+ GCEP +Y++++ G A A+F E + G+A T K +
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 429
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 117/265 (44%), Gaps = 16/265 (6%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKL 61
D+ LK D + +V+ C G+ A ++ + + + P ++L+KG+ G
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ L M + G ++ + +L+ + +L +EA K+ + RG+ +
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGD-------FNEAMKLWENVLARGLLTD 505
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
T NV+I+ LCK+ K +A ++ + + C P T+ L Y+ L+E + +
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM---MKADGCEPGIKTYDLLMSK 238
M+ G +++ + T++ G + H KV + ++A G P + TY L++
Sbjct: 566 YMERKGIFPTIE-----MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITG 620
Query: 239 LGAHNRVDKANALFHEAQSRGLAVT 263
+DKA A E +G+ +
Sbjct: 621 WCNIGMIDKAYATCFEMIEKGITLN 645
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 104/230 (45%), Gaps = 10/230 (4%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEAR 65
L D+ V+++ C G A R+ ++ + + + +C+ LI G+C G+L EA
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
++ M + YN ++D C + ++ EA K+ +M + V V T+
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYC-----RAGYV--DEALKLCDQMCQKEVVPTVMTY 439
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N+L+ +I D L L+ M + G +E + L+ +L++ E ++ + + +
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
G D ++ LC +E+V A ++ + C+P ++TY L
Sbjct: 500 RGLLT--DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 547
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG-FELGVVAYNAMLDCVCELCRQK 97
+++ P+ + ++ I G C GKLE+AR+L ++ F Y ++
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 98 DPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
F L E M +G+ N+ T+N LI LCK+ + A +L H++ + G PN
Sbjct: 773 KAFTLRDE-------MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNA 825
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKA 196
T+ LI L ++ + E + ++M G DK+
Sbjct: 826 ITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQG 864
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 111/284 (39%), Gaps = 45/284 (15%)
Query: 30 AERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAM--- 86
A+ +++ AR + P A LI GWC G +++A EM G L V + +
Sbjct: 596 ADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANS 655
Query: 87 ---LDCVCELCR--QK----DPFLLHSEAEKVLVEMDYRG-------------------- 117
LD + E C QK D L ++ K +E
Sbjct: 656 LFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLL 715
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCY-PNETTFVVLIRSLYQAARLEEG 176
VP N+ +NV I LCK K EDA KLF + + P+E T+ +LI A + +
Sbjct: 716 VPNNI-VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ D M G ++ Y + LC + V+ A ++ + G P TY+ L+
Sbjct: 775 FTLRDEMALKGIIPNI--VTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAV---------TPKEYAVDP 271
L V +A L + +GL PKE +DP
Sbjct: 833 DGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQGDVDIPKEVVLDP 876
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 97/247 (39%), Gaps = 54/247 (21%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG-GFELGVVAYNAMLDCVCELCRQKDP 99
+ PD C +++ +C G +++A A E G EL VV YN++++
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLIN----------G 270
Query: 100 FLLHSEAE---KVLVEMDYRGVPRNVETFNVLITNLCK---------------------- 134
+ + + E +VL M RGV RNV T+ LI CK
Sbjct: 271 YAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVAD 330
Query: 135 -------------IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+ DA+++ M E G N T LI ++ +L E +++
Sbjct: 331 QHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFS 390
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM---SK 238
RM + D Y + C V+ ALK+ M P + TY++L+ S+
Sbjct: 391 RMND--WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 239 LGAHNRV 245
+GA + V
Sbjct: 449 IGAFHDV 455
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 110/248 (44%), Gaps = 10/248 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ R+ + +++ C KG AE + + L + + D+ M +L+ G+C G++ +A
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R+ M G N++++ C K L+ EAE++ M+ + + T
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYC-----KSGQLV--EAEQIFSRMNDWSLKPDHHT 403
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N L+ C+ ++ALKL +M + P T+ +L++ + + + M
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMML 463
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G A D+ + L L + A+K++ + A G T ++++S L +
Sbjct: 464 KRGVNA--DEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEK 521
Query: 245 VDKANALF 252
V++A +
Sbjct: 522 VNEAKEIL 529
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFE---LGVVAYNAMLDCVCELCRQKDP 99
P E +LIK +C+ G +E A + EM +GV YNA ++ L ++K
Sbjct: 188 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIE---GLMKRKGN 244
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
EA V M ET+N++I K K+ + KL+ M C PN T
Sbjct: 245 ---TEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 301
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH---ALKV 216
+ L+ + + E+ +E+ ++++ G + Y + ++ R + A ++
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDV-----YVYNALMESYSRAGYPYGAAEI 356
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
F++M+ GCEP +Y++++ G A A+F E + G+A T K +
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 407
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 12/218 (5%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD+ M M+I + G E+AR++ M G V YN+++
Sbjct: 245 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS---------- 294
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ E K+ +M + +V ++ +LI + R+ E+AL +F M + G P + +
Sbjct: 295 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 354
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ + + +E+ + M+ L +Y L+ +E A K F +K
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDL--WSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
DG EP I TY L+ N V+K ++ + + G+
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
AE+VL + G NV ++ L+ + + K +A +F RM G P+ T+ ++++
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 166 SLYQAARLEEGDE----MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
+ + + +E +E ++D KS D+K Y+ + + E A KVF+ M
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSP---LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV 274
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDK 247
G TY+ LMS ++ V K
Sbjct: 275 GKGVPQSTVTYNSLMSFETSYKEVSK 300
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 9/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD +++I + L+ A M G E V +N ++DC C+ R
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR------- 494
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
H AE++ M+ RG T+N++I + + +D +L +M G PN T
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTT 554
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ ++ R + E ++ MKS G S Y + E A+ F +M +
Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSVGLKPS--STMYNALINAYAQRGLSEQAVNAFRVMTS 612
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
DG +P + + L++ G R +A A+ + G+
Sbjct: 613 DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 650
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 15/220 (6%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D + + +I G+ G +A +L G G +++ + + R
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTL------ 321
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
EAE + E+ G+ +N L+ K +DA + M + G P+E T+ +L
Sbjct: 322 -EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLL 380
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE---RVEHALKVFAMM 220
I + A R E ++ M++ + + F +L G + +V M
Sbjct: 381 IDAYVNAGRWESARIVLKEMEAGDV-----QPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
K+ G +P + Y++++ G N +D A F S G+
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI 475
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
+A KVL M GV N+ N I + + E AL+ RM G PN T+ +I
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA-MMKAD 223
R R+EE E+++ M S G DK +YY + LC +R+ + M K
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKG--CLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEH 377
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
G P TY+ L+ L H+ D+A +AQ +G + Y+
Sbjct: 378 GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYS 422
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 119/302 (39%), Gaps = 42/302 (13%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDG 59
M +++GL D+ + ++ L A A +KD F D+ ++ C +G
Sbjct: 373 MAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEG 432
Query: 60 KLEEARRLAGEMY-RGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
++ EA+ L EM +G VV Y A+++ C L +A+K+L M G
Sbjct: 433 RMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEV-------DKAKKLLQVMHTHGH 485
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
N ++ L+ +C+ K+ +A ++ + E PN T+ V++ L + +L E +
Sbjct: 486 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 545
Query: 179 MIDRMKSAGF---------------------------------GASLDKKAYYQFLTILC 205
++ M GF G +++ + + C
Sbjct: 546 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 605
Query: 206 GIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
+ ++ AL V M + TY L+ LG R+ +A L + +G+ TP
Sbjct: 606 QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPV 665
Query: 266 EY 267
Y
Sbjct: 666 TY 667
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 11/219 (5%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ +C+ I + +LE+A R M G VV YN M+ C+L R +
Sbjct: 275 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVE----- 329
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMG-EWGCYPNETTFV 161
EA ++L +M +G + ++ ++ LCK ++ + L +M E G P++ T+
Sbjct: 330 --EAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
LI L + +E + + GF +DK Y + LC R+ A + M
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGF--RIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 222 ADG-CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ G C P + TY +++ VDKA L + G
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 118/287 (41%), Gaps = 34/287 (11%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF--PDEAMCDMLIKGWCVDGK 60
++ G + D+ +V LC +G S A+ ++ ++ PD ++ G+C G+
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD--------------------PF 100
+++A++L M+ G + V+Y A+L+ +C + +
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 529
Query: 101 LLH--------SEAEKVLVEMDYRGV-PRNVETFNVLITNLCKIRKTEDALKLFHRMGEW 151
++H SEA V+ EM +G P VE N+L+ +LC+ +T +A K
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVE-INLLLQSLCRDGRTHEARKFMEECLNK 588
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVE 211
GC N F +I Q L+ ++D M A D Y + L R+
Sbjct: 589 GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA--DVFTYTTLVDTLGKKGRIA 646
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
A ++ M G +P TY ++ + +VD A+ + SR
Sbjct: 647 EATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G+L +A ++ M R G E ++ N +D R + +A + L M G+
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLE-------KALRFLERMQVVGI 308
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
NV T+N +I C + + E+A++L M GC P++ ++ ++ L + R+ E +
Sbjct: 309 VPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD 368
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
++ +M + G D+ Y + +L + + AL + G Y ++
Sbjct: 369 LMKKM-AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHA 427
Query: 239 LGAHNRVDKANALFHEAQSRG 259
L R+ +A L +E S+G
Sbjct: 428 LCKEGRMSEAKDLINEMLSKG 448
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P+ + +I+G+C ++EEA L +M+ G V+Y ++ LC++K
Sbjct: 308 IVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMG---YLCKEKRIV 364
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+ +K+ E VP V T+N LI L K ++AL E G ++ +
Sbjct: 365 EVRDLMKKMAKEHGL--VPDQV-TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGY 421
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
++ +L + R+ E ++I+ M S G D Y + C + V+ A K+ +M
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPP-DVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G +P +Y L++ + + +A + + ++ + Y+V
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 529
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 120/295 (40%), Gaps = 36/295 (12%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDG 59
M ++ + + V++ L +G S A +V+++ + FP ++L++ C DG
Sbjct: 514 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDG 573
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCE-------LCRQKDPFLLH--------- 103
+ EAR+ E G + VV + ++ C+ L D +L++
Sbjct: 574 RTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYT 633
Query: 104 ------------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-GE 150
+EA +++ +M ++G+ T+ +I C++ K +D + + +M
Sbjct: 634 TLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV 210
C T + +I L +LEE D ++ ++ + D K Y +
Sbjct: 694 QKC---RTIYNQVIEKLCVLGKLEEADTLLGKVLRTA--SRSDAKTCYALMEGYLKKGVP 748
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
A KV M P +K + L +L +VD+A+ L RG ++P+
Sbjct: 749 LSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG-HISPQ 802
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 16/249 (6%)
Query: 21 LCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWC-VDGKLEEARRLAGEMYRGGFEL 78
LC G AE + ++ +FP D ++++ GWC + + EA+R+ EM
Sbjct: 234 LCRHGHIEKAEEFML-ASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITP 292
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
+Y+ M+ C ++ D L+ E +K RG+ +E +N L+ L +
Sbjct: 293 NKDSYSHMISCFSKVGNLFDSLRLYDEMKK-------RGLAPGIEVYNSLVYVLTREDCF 345
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
++A+KL ++ E G P+ T+ +IR L +A +L+ ++ M S ++D ++
Sbjct: 346 DEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVD--TFH 403
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
FL + E L+V MK P +T+ L++ KL + + A ++ E
Sbjct: 404 AFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRF 459
Query: 259 GLAVTPKEY 267
+ P Y
Sbjct: 460 EIVANPALY 468
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + +I+ C GKL+ AR + M V ++A L+ V
Sbjct: 362 PDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN----------- 410
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ +VL +M + ETF +++ L K ++ E+ALK++ M + N ++
Sbjct: 411 FEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLA 470
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGF 188
I+ L LE+ E+ MKS GF
Sbjct: 471 TIQGLLSCGWLEKAREIYSEMKSKGF 496
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 12/218 (5%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD+ M M+I + G E+AR++ M G V YN+++
Sbjct: 252 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS---------- 301
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ E K+ +M + +V ++ +LI + R+ E+AL +F M + G P + +
Sbjct: 302 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 361
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ + + +E+ + M+ L +Y L+ +E A K F +K
Sbjct: 362 LLDAFAISGMVEQAKTVFKSMRRDRIFPDL--WSYTTMLSAYVNASDMEGAEKFFKRIKV 419
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
DG EP I TY L+ N V+K ++ + + G+
Sbjct: 420 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
AE+VL + G NV ++ L+ + + K +A +F RM G P+ T+ ++++
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224
Query: 166 SLYQAARLEEGDE----MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
+ + + +E +E ++D KS D+K Y+ + + E A KVF+ M
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSP---LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV 281
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDK 247
G TY+ LMS ++ V K
Sbjct: 282 GKGVPQSTVTYNSLMSFETSYKEVSK 307
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 11/267 (4%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEE 63
+G++ D + ++ + G S A +++D L + + PD +L+ G C G ++
Sbjct: 286 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345
Query: 64 ARRLAGEMYRGGFELG-VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
L +M GFEL ++ + ML +C+ R EA + +M G+ ++
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI-------DEALSLFNQMKADGLSPDL 398
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
++++I LCK+ K + AL L+ M + PN T L+ L Q L E ++D
Sbjct: 399 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+ S+ G +LD Y + +E AL++F ++ G P + T++ L+
Sbjct: 459 LISS--GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 516
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
+ +A + + GLA + Y
Sbjct: 517 QNIAEARKILDVIKLYGLAPSVVSYTT 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 118/310 (38%), Gaps = 53/310 (17%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + +V+ LC G A + ++ + I P+ L+ G C G L EA
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R L + G L +V YN ++D + ++ E KV++E G+ +V T
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL----ELFKVVIE---TGITPSVAT 505
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI CK + +A K+ + +G P+ ++ L+ + + DE+ MK
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 185 SAGF---------------------------------------------GASLDKKAYYQ 199
+ G G D+ Y
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 200 FLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ LC ++ + A +MK+ + TY++L+ L + + KA++ + Q +
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 260 LAVTPKEYAV 269
++++ Y
Sbjct: 686 VSLSKFAYTT 695
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
S ++ C GF A+ + + + P ++LI G C+ G + EA LA +M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
+ G E V YN L + + S A +V+ +M +G+ +V T+ +L+
Sbjct: 284 NKHGVEPDSVTYNI-------LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCG 336
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETT-FVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
C++ + L L M G N V++ L + R++E + ++MK+ G
Sbjct: 337 QCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL-- 394
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
S D AY + LC + + + AL ++ M P +T+ L+ L + +A +
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 251 LFHEAQSRG 259
L S G
Sbjct: 455 LLDSLISSG 463
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
+E ++ G C KLE+A VV++N+++ C+L F+
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKL-----GFV-- 238
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
A+ + G+ +V + N+LI LC + +AL+L M + G P+ T+ +L
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
+ + + E+I M G S D Y L C + ++ L + M +
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGL--SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 224 GCE-PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G E I +++S L R+D+A +LF++ ++ GL+ Y++
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 11/267 (4%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEE 63
+G++ D + ++ + G S A +++D L + + PD +L+ G C G ++
Sbjct: 286 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345
Query: 64 ARRLAGEMYRGGFELG-VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
L +M GFEL ++ + ML +C+ R EA + +M G+ ++
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI-------DEALSLFNQMKADGLSPDL 398
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
++++I LCK+ K + AL L+ M + PN T L+ L Q L E ++D
Sbjct: 399 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+ S+ G +LD Y + +E AL++F ++ G P + T++ L+
Sbjct: 459 LISS--GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 516
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
+ +A + + GLA + Y
Sbjct: 517 QNIAEARKILDVIKLYGLAPSVVSYTT 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 118/310 (38%), Gaps = 53/310 (17%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + +V+ LC G A + ++ + I P+ L+ G C G L EA
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R L + G L +V YN ++D + ++ E KV++E G+ +V T
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL----ELFKVVIE---TGITPSVAT 505
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI CK + +A K+ + +G P+ ++ L+ + + DE+ MK
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 185 SAGF---------------------------------------------GASLDKKAYYQ 199
+ G G D+ Y
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 200 FLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ LC ++ + A +MK+ + TY++L+ L + + KA++ + Q +
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 260 LAVTPKEYAV 269
++++ Y
Sbjct: 686 VSLSKFAYTT 695
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
S ++ C GF A+ + + + P ++LI G C+ G + EA LA +M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
+ G E V YN L + + S A +V+ +M +G+ +V T+ +L+
Sbjct: 284 NKHGVEPDSVTYNI-------LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCG 336
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETT-FVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
C++ + L L M G N V++ L + R++E + ++MK+ G
Sbjct: 337 QCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL-- 394
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
S D AY + LC + + + AL ++ M P +T+ L+ L + +A +
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 251 LFHEAQSRG 259
L S G
Sbjct: 455 LLDSLISSG 463
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
+E ++ G C KLE+A VV++N+++ C+L F+
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKL-----GFV-- 238
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
A+ + G+ +V + N+LI LC + +AL+L M + G P+ T+ +L
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
+ + + E+I M G S D Y L C + ++ L + M +
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGL--SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 224 GCE-PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G E I +++S L R+D+A +LF++ ++ GL+ Y++
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 13/235 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GL+ D +V C G A +V + R + PD+ LI G+C G +E A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ EM + G EL V ++A+ VC +C++ +AE+ L EM G+ + T
Sbjct: 435 LEIRKEMDQNGIELDRVGFSAL---VCGMCKEGRVI----DAERALREMLRAGIKPDDVT 487
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +++ CK + KL M G P+ T+ VL+ L + +++ D ++D M
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAM- 546
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
G D Y T+L G R ++ K + G + +Y ++++L
Sbjct: 547 -LNIGVVPDDITYN---TLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVNEL 597
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 114/295 (38%), Gaps = 31/295 (10%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLE 62
D G + +++ K C +G S A+++ ++ R + P + LI G+C G L+
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVC-------------ELCRQ----KDPF---LL 102
E RL +M + V Y+A+++ +C E+C++ D L+
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 103 HSEAEKVLVE--------MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCY 154
H + ++ M +G+ ++ +N L+ CK A + M G
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412
Query: 155 PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHAL 214
P++ T+ LI + +E E+ M G LD+ + + +C RV A
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI--ELDRVGFSALVCGMCKEGRVIDAE 470
Query: 215 KVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ M G +P TY ++M L E QS G + Y V
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 108/253 (42%), Gaps = 10/253 (3%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D + ++ LC + A + ++ R + P++ + LI G +G+++ +
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
+M G + +V YN +++ C K+ L+ A ++ M RG+ + T+ L
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFC-----KNGDLV--AARNIVDGMIRRGLRPDKITYTTL 421
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I C+ E AL++ M + G + F L+ + + R+ + + + M AG
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
D Y + C + K+ M++DG P + TY++L++ L ++ A
Sbjct: 482 KP--DDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 249 NALFHEAQSRGLA 261
+ L + G+
Sbjct: 540 DMLLDAMLNIGVV 552
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 70 EMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLI 129
E+ GF L V +N +++ + C++ + S+A+KV E+ R + V +FN LI
Sbjct: 230 EILDAGFPLNVYVFNILMN---KFCKEGNI----SDAQKVFDEITKRSLQPTVVSFNTLI 282
Query: 130 TNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFG 189
CK+ ++ +L H+M + P+ T+ LI +L + +++ + D M G
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
Query: 190 ASLDKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
+ F T++ G R ++ + + M + G +P I Y+ L++ + +
Sbjct: 343 PN-----DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 247 KANALFHEAQSRGL 260
A + RGL
Sbjct: 398 AARNIVDGMIRRGL 411
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 34/279 (12%)
Query: 14 LKVVVEKLCSKGF----ASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAG 69
L+V+++ LC +G + Y ER+ + P + ++L+ GW KL++A +L
Sbjct: 215 LEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWE 274
Query: 70 EMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE------ 123
EM + VV Y +++ C + R + + E + +E+++ ++
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 124 ----------------------TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
T+N L+ N CK A K+ M G P TT+
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
+ + + EEG + ++ AG S D+ Y+ L +LC ++ A++V MK
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGH--SPDRLTYHLILKMLCEDGKLSLAMQVNKEMK 452
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
G +P + T +L+ L +++A F A RG+
Sbjct: 453 NRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI 491
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 47 MCDMLIKGWCVDGKLEEA----RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
+ ++L+ C +G + EA R+ G M + V +N +L+ + K
Sbjct: 214 LLEVLLDALCKEGHVREASMYLERIGGTM-DSNWVPSVRIFNILLNGWFRSRKLK----- 267
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+AEK+ EM V V T+ LI C++R+ + A+++ M N F
Sbjct: 268 --QAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNP 325
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+I L +A RL E M++R G ++ Y + C + A K+ MM
Sbjct: 326 IIDGLGEAGRLSEALGMMERFFVCESGPTI--VTYNSLVKNFCKAGDLPGASKILKMMMT 383
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
G +P TY+ HN+ ++ L+
Sbjct: 384 RGVDPTTTTYNHFFKYFSKHNKTEEGMNLY 413
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 9/201 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
+I G G+L EA + + +V YN++ V C+ D A K+L
Sbjct: 326 IIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSL---VKNFCKAGD----LPGASKIL 378
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M RGV T+N K KTE+ + L+ ++ E G P+ T+ ++++ L +
Sbjct: 379 KMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCED 438
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
+L ++ MK+ G D + +LC +E +E A + F G P
Sbjct: 439 GKLSLAMQVNKEMKNRGIDP--DLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYI 496
Query: 231 TYDLLMSKLGAHNRVDKANAL 251
T+ ++ + L + D A L
Sbjct: 497 TFKMIDNGLRSKGMSDMAKRL 517
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ ++LIKG+ E A ++ EM + VV YN+++ LCR D
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGF---LCRNDD---- 236
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A+ +L +M + + N TF +L+ LC + +A KL M GC P + +
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ L + R++E ++ MK D Y + LC RV A +V M+
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRRIKP--DVVIYNILVNHLCTECRVPEAYRVLTEMQM 354
Query: 223 DGCEPGIKTYDLLM 236
GC+P TY +++
Sbjct: 355 KGCKPNAATYRMMI 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 21 LCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELG 79
LC A+ +++D+ + I P+ +L+KG C G+ EA++L +M G + G
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
+V Y ++ + + R EA+ +L EM R + +V +N+L+ +LC +
Sbjct: 291 LVNYGILMSDLGKRGRI-------DEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVP 343
Query: 140 DALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQ 199
+A ++ M GC PN T+ ++I + + G +++ M AS
Sbjct: 344 EAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAML-----ASRHCPTPAT 398
Query: 200 FLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
F+ ++ G+ + ++HA V +M G + L+S L
Sbjct: 399 FVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDL 441
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 114 DYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARL 173
D R P +V +FN+LI E A K+F M E P+ T+ LI L + +
Sbjct: 179 DMRLRPNSV-SFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 174 EEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYD 233
+ +++ M + + + LC A K+ M+ GC+PG+ Y
Sbjct: 238 GKAKSLLEDMIKKRIRP--NAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 234 LLMSKLGAHNRVDKANALFHEAQSR 258
+LMS LG R+D+A L E + R
Sbjct: 296 ILMSDLGKRGRIDEAKLLLGEMKKR 320
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 46/254 (18%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
+I+GW K EEA +L E + G V N +L +C+ + EA ++L
Sbjct: 415 IIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKT-------DEATELL 466
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+M+ RG+ NV ++N ++ C+ + + A +F + E G PN T+ +LI ++
Sbjct: 467 SKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK--------- 221
+ E+++ M S+ ++ Y + LC + + A ++ A M
Sbjct: 527 HDEQNALEVVNHMTSSNI--EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 222 ---------------------------ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+G P + TY LM+ L +NR+D+A + E
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 255 AQSRGLAVTPKEYA 268
+++G+ + Y
Sbjct: 645 MKNKGVKLDIPAYG 658
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 19/212 (8%)
Query: 36 DLARVIF---------PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAM 86
DLAR++F P+ +LI G + + A + M E+ V Y +
Sbjct: 495 DLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTI 554
Query: 87 LDCVCELCRQKDPFLLHSEAEKVLVEM-DYRGVPRNVETFNVLITNLCKIRKTEDALKLF 145
++ +C++ + S+A ++L M + + + + ++N +I K + + A+ +
Sbjct: 555 INGLCKVGQT-------SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAY 607
Query: 146 HRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILC 205
M G PN T+ L+ L + R+++ EM D MK+ G LD AY + C
Sbjct: 608 EEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK--GVKLDIPAYGALIDGFC 665
Query: 206 GIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+E A +F+ + +G P Y+ L+S
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQPIYNSLIS 697
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 9/220 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P+ L+ G C + ++++A + EM G +L + AY A++D C+ +
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L SE L+E G+ + +N LI+ + AL L+ +M + G + T+
Sbjct: 675 ALFSE----LLE---EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI L + L E+ M++ G D+ Y + L + +K+F M
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAVGLVP--DEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
K + P + Y+ +++ +D+A L E +G+
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 12/266 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA--RVIFPDEAMCDMLIKGWCVDGKLEE 63
G + D + V+ C + A +++++ ++ P + +I G +++
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A RL EM G + VVA +++ C+ +L + EK G N
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK-------EGPSPNSV 375
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TF+VLI K + E AL+ + +M G P+ +I+ + + EE ++ D
Sbjct: 376 TFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDES 435
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
G L+ LC + + A ++ + M++ G P + +Y+ +M
Sbjct: 436 FETGLANVF---VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQK 492
Query: 244 RVDKANALFHEAQSRGLAVTPKEYAV 269
+D A +F +GL Y++
Sbjct: 493 NMDLARIVFSNILEKGLKPNNYTYSI 518
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 40/297 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKG----FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
GL + + ++V+ LC G +RM ++L + PD +IK +G L
Sbjct: 258 GLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCK---PDVFAYTAMIKTLVSEGNL 314
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCR-----------QKDPFLLHSEAEKVL 110
+ + R+ EM R + V+AY ++ +C+ R + L+ E +VL
Sbjct: 315 DASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVL 374
Query: 111 VE-----------------MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGC 153
+E + G ++ +N +I LC + + + A KLF E
Sbjct: 375 IEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEEL 434
Query: 154 YPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE-RVEH 212
P+ T ++ + RL + +++R+ G+ S QF +LC E +
Sbjct: 435 EPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVS---DYLTQFFKLLCADEEKNAM 491
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
AL VF ++K G + Y++LM L + K+ +LF+E + G Y++
Sbjct: 492 ALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSI 547
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P E ++LI+ + + + +M + GF+ V YN ++D + K+ +
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALV-----KNGYF- 244
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A V + G+ TF +L+ LCK + E+ L++ RM E C P+ +
Sbjct: 245 -DLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTA 303
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+I++L L+ + D M+ D AY + LC RVE ++F MK
Sbjct: 304 MIKTLVSEGNLDASLRVWDEMRRDEIKP--DVMAYGTLVVGLCKDGRVERGYELFMEMKG 361
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ Y +L+ A +V A L+ + G
Sbjct: 362 KQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSG 398
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 11/237 (4%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVIFPDEAMCDM-LIKGWCVDGKLEEARRLAGEMYRGG 75
+++ L G+ A + +D +E+ M L+KG C G++EE + M
Sbjct: 234 IMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENL 293
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
+ V AY AM+ + +V EM + +V + L+ LCK
Sbjct: 294 CKPDVFAYTAMIKTLVSEGNLDASL-------RVWDEMRRDEIKPDVMAYGTLVVGLCKD 346
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
+ E +LF M + + VLI ++ + + + +G+ A D
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIA--DIG 404
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV-DKANAL 251
Y + LC + +V+ A K+F + + EP +T +M NR+ D +N L
Sbjct: 405 IYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVL 461
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
E K+L EM G N T+N LI + + ++A+ +F++M E GC P+ T+ LI
Sbjct: 377 EINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI 436
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
+A L+ +M RM+ AG S D Y + L + A ++F M G
Sbjct: 437 DIHAKAGFLDIAMDMYQRMQEAGL--SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 494
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
C P + T++++++ + A L+ + Q+ G Y++
Sbjct: 495 CTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 11/228 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD LI G L+ A + M G Y+ +++C+ +
Sbjct: 427 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP----- 481
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A ++ EM +G N+ TFN++I K R E ALKL+ M G P++ T+ +
Sbjct: 482 --AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCG-IERVEHALKVFAMMK 221
++ L LEE + + M+ + + + Y L L G V+ A + + M
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNW---VPDEPVYGLLVDLWGKAGNVDKAWQWYQAML 596
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G P + T + L+S +R+ +A L + GL + + Y +
Sbjct: 597 QAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTL 644
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G + T+ ++ NL + ++ + KL M GC PN T+ LI S +A L+E
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ ++M+ A G D+ Y + I ++ A+ ++ M+ G P TY +++
Sbjct: 414 MNVFNQMQEA--GCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 237 SKLGAHNRVDKANALFHEAQSRG 259
+ LG + A+ LF E +G
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQG 494
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
K+L EM G N T+N LI + + +A+ +F++M E GC P+ T+ LI
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
+A L+ +M RM++ G S D Y + L + A K+F M GC
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGL--SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCT 501
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
P + TY+++M A L+ + Q+ G Y++
Sbjct: 502 PNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 11/228 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD LI G L+ A + M GG Y+ +++C+ +
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP----- 486
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A K+ EM +G N+ T+N+++ K R ++ALKL+ M G P++ T+ +
Sbjct: 487 --AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCG-IERVEHALKVFAMMK 221
++ L LEE + + M+ + + + Y L L G VE A + + M
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNW---IPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G P + T + L+S N++ +A L + GL + + Y +
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTL 649
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G + T+ ++ NL + ++ KL M GC PN T+ LI S +A L E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ ++M+ A G D+ Y + I ++ A+ ++ M+A G P TY +++
Sbjct: 419 MNVFNQMQEA--GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 237 SKLGAHNRVDKANALFHEAQSRG 259
+ LG + A+ LF E +G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQG 499
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
K+L EM G N T+N LI + + +A+ +F++M E GC P+ T+ LI
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
+A L+ +M RM++ G S D Y + L + A K+F M GC
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGL--SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCT 501
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
P + TY+++M A L+ + Q+ G Y++
Sbjct: 502 PNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 11/228 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD LI G L+ A + M GG Y+ +++C+ +
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP----- 486
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A K+ EM +G N+ T+N+++ K R ++ALKL+ M G P++ T+ +
Sbjct: 487 --AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCG-IERVEHALKVFAMMK 221
++ L LEE + + M+ + + + Y L L G VE A + + M
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNW---IPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G P + T + L+S N++ +A L + GL + + Y +
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTL 649
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G + T+ ++ NL + ++ KL M GC PN T+ LI S +A L E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ ++M+ A G D+ Y + I ++ A+ ++ M+A G P TY +++
Sbjct: 419 MNVFNQMQEA--GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 237 SKLGAHNRVDKANALFHEAQSRG 259
+ LG + A+ LF E +G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQG 499
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
K+L EM G N T+N LI + + +A+ +F++M E GC P+ T+ LI
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
+A L+ +M RM++ G S D Y + L + A K+F M GC
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGL--SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCT 501
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
P + TY+++M A L+ + Q+ G Y++
Sbjct: 502 PNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 11/228 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD LI G L+ A + M GG Y+ +++C+ +
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP----- 486
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A K+ EM +G N+ T+N+++ K R ++ALKL+ M G P++ T+ +
Sbjct: 487 --AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCG-IERVEHALKVFAMMK 221
++ L LEE + + M+ + + + Y L L G VE A + + M
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNW---IPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G P + T + L+S N++ +A L + GL + + Y +
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTL 649
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G + T+ ++ NL + ++ KL M GC PN T+ LI S +A L E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ ++M+ A G D+ Y + I ++ A+ ++ M+A G P TY +++
Sbjct: 419 MNVFNQMQEA--GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 237 SKLGAHNRVDKANALFHEAQSRG 259
+ LG + A+ LF E +G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQG 499
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
++ G C DG ++EA +L G M G VV Y A+++ C+ + +D A+++
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIED-------AKRIF 189
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+M G+ N ++ VL+ L +DA+ M E G PN TFV L+ +L +
Sbjct: 190 RKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRV 249
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
+E+ ID + GF ++ KA +F+
Sbjct: 250 KGVEQAQSAIDTLNQKGFAVNV--KAVKEFM 278
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
++ G C DG ++EA +L G M G VV Y A+++ C+ + +D A+++
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIED-------AKRIF 189
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+M G+ N ++ VL+ L +DA+ M E G PN TFV L+ +L +
Sbjct: 190 RKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRV 249
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
+E+ ID + GF ++ KA +F+
Sbjct: 250 KGVEQAQSAIDTLNQKGFAVNV--KAVKEFM 278
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 112/267 (41%), Gaps = 10/267 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKL 61
+D G K + S+ ++++ G +++ + A P + M+I+ C ++
Sbjct: 849 QDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRV 908
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+A + EM F++ + +N+ML + K ++ ++ +E D
Sbjct: 909 RDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDE------ 962
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
T+N LI C+ R+ E+ L +M G P T+ LI + + LE+ +++ +
Sbjct: 963 -TTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFE 1021
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
+ S G LD+ Y+ + I A K+ MMK G EP + T LLM +
Sbjct: 1022 ELLSKGL--KLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSS 1079
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYA 268
+A + + + +T Y+
Sbjct: 1080 SGNPQEAEKVLSNLKDTEVELTTLPYS 1106
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 27 ASYAERMVKDLARVIF---------PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFE 77
++YA+ + AR IF P ++L+ CVDG+LEE + E+ GF+
Sbjct: 795 SAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFK 854
Query: 78 LGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRK 137
+ + MLD R + F E +K+ M G + + ++I LCK ++
Sbjct: 855 ISKSSILLMLDA---FARAGNIF----EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKR 907
Query: 138 TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAY 197
DA + M E + +++ ++ ++ R+K G D+ Y
Sbjct: 908 VRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEP--DETTY 965
Query: 198 YQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQS 257
+ + C R E + M+ G +P + TY L+S G +++A LF E S
Sbjct: 966 NTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLS 1025
Query: 258 RGL 260
+GL
Sbjct: 1026 KGL 1028
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 25 GFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
G A+ AER+ +L + FPD + L+ + + E+ + + +M + GF + Y
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP-RNVE--TFNVLITNLCKIRKTED 140
N ++ + + L+ D +G+ RN + T+ VLI +L K +T +
Sbjct: 406 NTIIHMYGKQGQLDLALQLYK---------DMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
A L M + G P T+ LI +A + EE ++ M +G D AY
Sbjct: 457 AAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSG--TKPDNLAYSVM 514
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
L +L A ++ M +DG P Y+L++ L NR D
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSD 560
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 13/248 (5%)
Query: 25 GFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEE--ARRLAGEMYRGGFELGVV 81
G S A+ +V + R PD + LI G L A L + G +
Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAI 298
Query: 82 AYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDA 141
YN +L +D L A KV +M+ ++ T+N +I+ + +A
Sbjct: 299 TYNTLLSAC-----SRDSNL--DGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 142 LKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
+LF + G +P+ T+ L+ + + E+ E+ +M+ GFG D+ Y +
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK--DEMTYNTII 409
Query: 202 TILCGIERVEHALKVFAMMKA-DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ +++ AL+++ MK G P TY +L+ LG NR +A AL E G+
Sbjct: 410 HMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGI 469
Query: 261 AVTPKEYA 268
T + Y+
Sbjct: 470 KPTLQTYS 477
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 107 EKVLVEMDYRGVPR---NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
E + VE+ R P V+ +N ++ + K A +L M + GC P+ +F L
Sbjct: 207 ESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTL 266
Query: 164 IRSLYQAARLEEGD-------EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
I ARL+ G E++D ++++G D Y L+ ++ A+KV
Sbjct: 267 IN-----ARLKSGGLTPNLAVELLDMVRNSGLRP--DAITYNTLLSACSRDSNLDGAVKV 319
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
F M+A C+P + TY+ ++S G +A LF E + +G
Sbjct: 320 FEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 92/218 (42%), Gaps = 8/218 (3%)
Query: 45 EAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS 104
E++C ++ +C G E A ++ + GF D + +QK L
Sbjct: 716 ESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYT--DIIEAYGKQK----LWQ 769
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
+AE V+ + G +++T+N L++ + E A +F+ M G P + +L+
Sbjct: 770 KAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILL 829
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
+L RLEE +++ ++ GF S K + L + K+++ MKA G
Sbjct: 830 HALCVDGRLEELYVVVEELQDMGFKIS--KSSILLMLDAFARAGNIFEVKKIYSSMKAAG 887
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
P I+ Y +++ L RV A + E + V
Sbjct: 888 YLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKV 925
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 51/256 (19%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + L+ D L+ A ++ +M + + YNAM+ V C L
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS-VYGRCG------L 347
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-------------- 148
+EAE++ +E++ +G + T+N L+ + R TE +++ +M
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 149 ----------------------GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSA 186
G G P+ T+ VLI SL +A R E ++ M
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 187 GFGASLDKKAYYQFLTILCGIERV---EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
G +L + ++CG + E A F+ M G +P Y +++ L N
Sbjct: 468 GIKPTLQ-----TYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGN 522
Query: 244 RVDKANALFHEAQSRG 259
KA L+ + S G
Sbjct: 523 ETRKAWGLYRDMISDG 538
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 9/219 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D + +++I G+L+ A +L +M +++++D + + R
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL------- 364
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+ KV +EM G + F LI + K K + AL+L+ M + G PN + ++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I S ++ +LE + M+ AGF + Y L + G +V+ A+K++ M
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPT--PSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 482
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
G PG+ +Y L++ L VD A + E ++ G +V
Sbjct: 483 GLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSV 521
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+ ++I +L K + + A KLF +M E P+ + F L+ S+ +A RL+ M
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTS--MKVY 371
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M+ GFG + + +++ AL+++ MK G P Y +++
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 431
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYA 268
+++ A +F + + G TP Y+
Sbjct: 432 GKLEVAMTVFKDMEKAGFLPTPSTYS 457
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 10/228 (4%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D + ++++ L G A ++ + + R + P ++ L+ G+L+ + ++
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
EM G + +++D + + L E +K G N + ++
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKK-------SGFRPNFGLYTMI 424
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I + K K E A+ +F M + G P +T+ L+ + +++ ++ + M +AG
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
L +Y LT+L V+ A K+ MKA G + D+LM
Sbjct: 485 RPGLS--SYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM 530
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 10/192 (5%)
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
D + R+ M G E V + + +CE R EA+ ++ E+ +
Sbjct: 137 DSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRV-------DEAKDLMKELTEKH 189
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRM-GEWGCYPNETTFVVLIRSLYQAARLEEG 176
P + T+N L+ +LCK + + M ++ P+ +F +LI ++ + L E
Sbjct: 190 SPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREA 249
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
++ ++ +AGF D Y + C + + A+ V+ MK +G EP TY+ L+
Sbjct: 250 MYLVSKLGNAGFKP--DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 237 SKLGAHNRVDKA 248
L RV++A
Sbjct: 308 FGLSKAGRVEEA 319
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 8/197 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD+ D+ ++ C G+++EA+ L E+ YN +L LC+ KD L
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK---HLCKCKD---L 210
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
H E V D V ++ +F +LI N+C + +A+ L ++G G P+ +
Sbjct: 211 HVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNT 270
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+++ ++ E + +MK G D+ Y + L RVE A M
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEP--DQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 223 DGCEPGIKTYDLLMSKL 239
G EP TY LM+ +
Sbjct: 329 AGYEPDTATYTSLMNGM 345
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLE 62
+ GL+ D+ + + V LC G A+ ++K+L + PD + L+K C L
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 63 EARRLAGEMYRGGFEL--GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
EM R F++ +V++ ++D VC + EA ++ ++ G
Sbjct: 212 VVYEFVDEM-RDDFDVKPDLVSFTILIDNVCNSKNLR-------EAMYLVSKLGNAGFKP 263
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+ +N ++ C + K +A+ ++ +M E G P++ T+ LI L +A R+EE +
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 181 DRMKSAGFGASLDKKAYYQFLTILC 205
M AG+ D Y + +C
Sbjct: 324 KTMVDAGYEP--DTATYTSLMNGMC 346
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 15/264 (5%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
+ G++ D + V++ LC G A +V+D+ + + PD + ++ + G+++
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
A + ++ GFE VVA + M+D + + + LH +E N
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ------LHEAIVYFCIE------KAND 403
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
+ VLI LCK + +LF ++ E G P++ + I L + L + ++ R
Sbjct: 404 VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTR 463
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M G LD AY + L + A +VF M G P +DLL+
Sbjct: 464 MVQEGL--LLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKE 521
Query: 243 NRVDKANALFHEAQSRGLAVTPKE 266
+ A+ L + Q RGL +
Sbjct: 522 GNMAAASDLLLDMQRRGLVTAVSD 545
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 9/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ I +C G+L+ A + M R VV + ++D C+ + L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ E +V + + NV T+ LI CK + + A +++ RM E PN +
Sbjct: 221 YKEMRRVRMSL-------NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT 273
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+I +Q + + + +M + G LD AY ++ LCG +++ A ++ M+
Sbjct: 274 IIDGFFQRGDSDNAMKFLAKMLNQGM--RLDITAYGVIISGLCGNGKLKEATEIVEDMEK 331
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
P + + +M+ R+ A ++H+ RG
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGF 369
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 26/274 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G R S VV +C G +AE +V + R PD + LI G C +G + A
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 65 RRLAGEMYRG--GF--ELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV-- 118
L E R GF + +V++N++ + ++ + F+ Y GV
Sbjct: 111 S-LVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFV-------------YMGVML 156
Query: 119 ---PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
NV T++ I CK + + ALK FH M PN TF LI +A LE
Sbjct: 157 KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEV 216
Query: 176 GDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
+ M+ SL+ Y + C ++ A ++++ M D EP Y +
Sbjct: 217 AVSLYKEMRRVRM--SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
Query: 236 MSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ D A + ++G+ + Y V
Sbjct: 275 IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 10/225 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLE 62
D+G S ++ L S ++ ++ +A C ++LIKG C G LE
Sbjct: 160 DFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLE 219
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
A +L E + V+ ++ ++ C + ++ F L EK +E D
Sbjct: 220 AALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPD-------T 272
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
TFN+LI+ L K + E+ + L RM GC PN T+ ++ L R E EM+ +
Sbjct: 273 ITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQ 332
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEP 227
M S G S +Y + + LC + V V M G P
Sbjct: 333 MISWGMRPSF--LSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
L E K+ V GV + N+LI LC+ E AL+L + PN TF
Sbjct: 182 LFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFS 241
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
LIR + EE ++++RM+ D + ++ L RVE + + MK
Sbjct: 242 PLIRGFCNKGKFEEAFKLLERMEKERIEP--DTITFNILISGLRKKGRVEEGIDLLERMK 299
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
GCEP TY ++ L R +A + + S G+
Sbjct: 300 VKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGM 338
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
G E+ N ++ +CE + A ++L E + NV TF+ LI C
Sbjct: 197 GVEIDACCLNILIKGLCESGNLE-------AALQLLDEFPQQKSRPNVMTFSPLIRGFCN 249
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
K E+A KL RM + P+ TF +LI L + R+EEG ++++RMK G +
Sbjct: 250 KGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVK--GCEPNP 307
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
Y + L L +R A ++ + M + G P +Y
Sbjct: 308 GTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSY 345
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 25/264 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
GLK D+ + ++V CS G A+ + +++R F P D+LI+G G LE A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYR----GVPR 120
+ + +M +GGF + +N +++ + + S + +EM Y G+
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISK-----------SGEVEFCIEMYYTACKLGLCV 320
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+++T+ LI + KI K ++A +L + E G P + + +I+ + + ++
Sbjct: 321 DIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFF 380
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGI-ERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
MK A + Y L +CG + A M G P + +D++ L
Sbjct: 381 SDMK---VKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGL 437
Query: 240 ---GAHNRVDKANALFHEAQSRGL 260
G H+ + L E Q RG+
Sbjct: 438 KNGGKHDLAMRIEQL--EVQLRGV 459
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 115 YRGVPRN------VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ GVP+ V+ +N L+ LC ++ A L RM G P++ T+ +L+
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
A +++E E +D M GF + + L +E A ++ + M G P
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPP--ARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
I+T+++L+ + V+ +++ A GL V Y
Sbjct: 287 IQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTY 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 12/238 (5%)
Query: 32 RMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG-GFELGVVAYNAMLDCV 90
+ +KDL+ I E +C +I+ + +G +++A L + + G + V YN++L +
Sbjct: 135 KQMKDLSLDI-SGETLC-FIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHAL 192
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
C D + H A ++ M +G+ + T+ +L+ C K ++A + M
Sbjct: 193 C------DVKMFHG-AYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV 210
G P +LI L A LE EM+ +M GF D + + + + V
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP--DIQTFNILIEAISKSGEV 303
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
E ++++ G I TY L+ + ++D+A L + G P YA
Sbjct: 304 EFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYA 361
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 12/222 (5%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR--VIFPDEAMCDMLIKGWCVD 58
M + YG++ +++ LC G S+A ++ KD A I D A+ LI
Sbjct: 213 MLKVYGVRPTVHIYASLIKALCQIGELSFAFKL-KDEAYEGKIKVDAAIYSTLISSLIKA 271
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G+ E + EM G + V YN +++ C + D A +VL EM +G+
Sbjct: 272 GRSNEVSMILEEMSEKGCKPDTVTYNVLIN---GFCVEND----SESANRVLDEMVEKGL 324
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+V ++N+++ +I+K E+A LF M GC P+ ++ ++ L + + EE
Sbjct: 325 KPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAV 384
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
++D M G+ D+ FL LC ++E KV + +
Sbjct: 385 ILDEMLFKGYKPRRDR--LEGFLQKLCESGKLEILSKVISSL 424
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 6/168 (3%)
Query: 94 CRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE-WG 152
C Q F +A K+ EM + V TF LI LCK + ++ALK+ H M + +G
Sbjct: 162 CSQSGCF---DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYG 218
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
P + LI++L Q L ++ D +D Y ++ L R
Sbjct: 219 VRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI--KVDAAIYSTLISSLIKAGRSNE 276
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ M GC+P TY++L++ N + AN + E +GL
Sbjct: 277 VSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 112/285 (39%), Gaps = 33/285 (11%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D SL +V+ L A ++ D+ + + P M + +I+G C +G+ EE+ +L
Sbjct: 438 DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCR--------------QKDPFLLHS---------- 104
GEM G E N + C+ E C +P++ H+
Sbjct: 498 GEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCEN 557
Query: 105 ----EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+A K L ++ G ++ I L K + L+LF + G P+ +
Sbjct: 558 GRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAY 617
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
VLI++L +A R E D + + M S G ++ Y + C ++ L M
Sbjct: 618 HVLIKALCKACRTMEADILFNEMVSKGLKPTV--ATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
D P + TY L+ L A R + A+F + +G P
Sbjct: 676 YEDEKNPDVITYTSLIHGLCASGR--PSEAIFRWNEMKGKDCYPN 718
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 13/238 (5%)
Query: 32 RMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVC 91
+++KD + I PD ++I K++ A L ++ + G G + YN +++ +C
Sbjct: 426 KLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMC 485
Query: 92 ELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW 151
+ R + E+ K+L EM GV + T N + L + AL L +M +
Sbjct: 486 KEGRSE-------ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFY 538
Query: 152 GCYP--NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER 209
G P TTF L++ L + R + + +D + GF + A + L E
Sbjct: 539 GFEPWIKHTTF--LVKKLCENGRAVDACKYLDDVAGEGFLGHM--VASTAAIDGLIKNEG 594
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
V+ L++F + A+G P + Y +L+ L R +A+ LF+E S+GL T Y
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATY 652
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 105/262 (40%), Gaps = 18/262 (6%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-----PDEAMCDMLIKGWCV 57
R YG + +V+KLC G A A + + D+A F A D LIK V
Sbjct: 536 RFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGV 595
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
D LE R + G V+AY+ ++ +C+ CR EA+ + EM +G
Sbjct: 596 DRGLELFRDICA----NGHCPDVIAYHVLIKALCKACRTM-------EADILFNEMVSKG 644
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
+ V T+N +I CK + + L RM E P+ T+ LI L + R E
Sbjct: 645 LKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI 704
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+ MK G ++ + + LC AL F M+ EP Y L+S
Sbjct: 705 FRWNEMK--GKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVS 762
Query: 238 KLGAHNRVDKANALFHEAQSRG 259
+ ++ +F E +G
Sbjct: 763 SFLSSENINAGFGIFREMVHKG 784
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 21/279 (7%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
RD G D+ +L V++ C+ G + A + ++ + DE + +L+ +C G+++
Sbjct: 206 RDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVD 265
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A L + L Y ++ + R F L + ++ G+ ++
Sbjct: 266 KAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRM-------GMNADI 318
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI-- 180
++VLI LCK + E AL L+ + G P+ L+ S + + L E+I
Sbjct: 319 ALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIG 378
Query: 181 DRMKSA----------GFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK--ADGCEPG 228
D K + GF + Y F+ L G + ++ ++K P
Sbjct: 379 DIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPD 438
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+ ++++ L N+VD A L H+ GL P Y
Sbjct: 439 SDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMY 477
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 40/250 (16%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD +++ C +G++ EA + + G ++ VVA N ++ C L + +
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR----- 335
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A++ +EM+ +G NVET+N+LI C + + AL F+ M N TF
Sbjct: 336 --VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNT 393
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAG--FGASLDKK--AYYQF---------LTILCGIER 209
LIR L R ++G ++++ M+ + GA +D Y F L L +E+
Sbjct: 394 LIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEK 453
Query: 210 -----VEHALKVFAM---------------MKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
V+ + K+ ++ M +G P I L+ + H +++++
Sbjct: 454 LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESL 513
Query: 250 ALFHEAQSRG 259
L ++ +RG
Sbjct: 514 ELINDMVTRG 523
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 26/250 (10%)
Query: 24 KGFASYAERMVK---DLARVIFPDEAMCD----------MLIKGWCVDGKLEEARRLAGE 70
K F S + +VK D+AR F + M +L+KG + ++ + +L
Sbjct: 148 KVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQI 207
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M G V YN +L +C+ + L SE ++ P +V TFN+LI+
Sbjct: 208 MKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----------PNDV-TFNILIS 256
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
C +K ++ L + G P+ T ++ L R+ E E+++R++S G
Sbjct: 257 AYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESK--GG 314
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
+D A + C + ++ A + F M+ G P ++TY+LL++ +D A
Sbjct: 315 KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Query: 251 LFHEAQSRGL 260
F++ ++ +
Sbjct: 375 TFNDMKTDAI 384
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 9/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ + LI + +G L EA + +M + G + VV+ +L C ++K
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL-AACSRSKKK----- 476
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ VL RG+ N +N I + + E A+ L+ M + + TF +
Sbjct: 477 -VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + ++ E + M+ L K+ Y L +V A +F MK
Sbjct: 536 LISGSCRMSKYPEAISYLKEMED--LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKM 593
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
GCEP + Y ++ A + KA LF E ++ G+
Sbjct: 594 AGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 7/218 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD D LI G+ A L +M R YN +++ C +
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINA----CGSSGNW-- 229
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA +V +M GV ++ T N++++ R+ AL F M P+ TTF +
Sbjct: 230 -REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+I L + + + ++ + M+ D + + + +E+ VF M A
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+G +P I +Y+ LM H A ++ + + G+
Sbjct: 349 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 386
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 17/240 (7%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMV--KDLARVIFP--DEAMCDMLIKGWCVDG 59
D+ L RD S +V+ LC AE + K++ F + + +++++GW G
Sbjct: 145 DFNL-RDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLG 203
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ + +M G + +Y+ +D +C+ P+ +A K+ EM R +
Sbjct: 204 WWGKCKEYWKKMDTEGVTKDLFSYSIYMDI---MCKSGKPW----KAVKLYKEMKSRRMK 256
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V +N +I + + E +++F M E GC PN T +I+ L + R+ + M
Sbjct: 257 LDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRM 316
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+D M G D Y + + +E+ L +F M G P + TY +LM K
Sbjct: 317 LDEMPKR--GCQPDSITY---MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKF 371
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 9/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ + LI + +G L EA + +M + G + VV+ +L C ++K
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL-AACSRSKKK----- 344
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ VL RG+ N +N I + + E A+ L+ M + + TF +
Sbjct: 345 -VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + ++ E + M+ L K+ Y L +V A +F MK
Sbjct: 404 LISGSCRMSKYPEAISYLKEMED--LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKM 461
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
GCEP + Y ++ A + KA LF E ++ G+
Sbjct: 462 AGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 499
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 7/218 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD D LI G+ A L +M R YN +++ C +
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINA----CGSSGNW-- 97
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA +V +M GV ++ T N++++ R+ AL F M P+ TTF +
Sbjct: 98 -REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 156
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+I L + + + ++ + M+ D + + + +E+ VF M A
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+G +P I +Y+ LM H A ++ + + G+
Sbjct: 217 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 254
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 114/297 (38%), Gaps = 40/297 (13%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKL 61
RD + DR V + L G A +++++ R I PD LI G+C+ GK+
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+A L EM G ++ YN + V L R E ++ M G N
Sbjct: 440 VDALDLIDEMIGNGMSPDLITYNVL---VSGLARNGH----EEEVLEIYERMKAEGPKPN 492
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV------------------- 162
T +V+I LC RK ++A F + E C N+ +FV
Sbjct: 493 AVTNSVIIEGLCFARKVKEAEDFFSSL-EQKCPENKASFVKGYCEAGLSKKAYKAFVRLE 551
Query: 163 ----------LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
L SL LE+ +++ +M + + + + + C + V
Sbjct: 552 YPLRKSVYIKLFFSLCIEGYLEKAHDVLKKM--SAYRVEPGRSMCGKMIGAFCKLNNVRE 609
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
A +F M G P + TY +++ N + KA +LF + + RG+ Y V
Sbjct: 610 AQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV 666
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 25/251 (9%)
Query: 24 KGF--ASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGV 80
KG+ A +++ K R+ +P +++ L C++G LE+A + +M E G
Sbjct: 532 KGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGR 591
Query: 81 VAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
M+ C+L + EA+ + M RG+ ++ T+ ++I C++ + +
Sbjct: 592 SMCGKMIGAFCKLNNVR-------EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQK 644
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIR-------------SLYQAARLEEGDEMIDRMKSAG 187
A LF M + G P+ T+ VL+ S+ + E++ +AG
Sbjct: 645 AESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAG 704
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
G LD Y + C + +E A ++F M G EP + Y L+S +D
Sbjct: 705 IG--LDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDM 762
Query: 248 ANALFHEAQSR 258
A L E +
Sbjct: 763 AVTLVTELSKK 773
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 10/201 (4%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+L EA+ +A + G F + N +LD + DP A + LV M G
Sbjct: 308 RLTEAKEVAEVIVSGKFPMD----NDILDALIGSVSAVDP----DSAVEFLVYMVSTGKL 359
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+ T + L NLC+ K++ +K + + G + ++ ++I L +A R+ E
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+ MK G D Y + C E + A K++ M +GC+ + TY++L+ KL
Sbjct: 420 LQEMKKEGLAP--DVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKL 477
Query: 240 GAHNRVDKANALFHEAQSRGL 260
+++ LF + RG+
Sbjct: 478 SEEGEAEESLRLFDKMLERGI 498
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 82 AYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDA 141
+Y+ M+ +C+ R ++ + L EM G+ +V +N LI CK A
Sbjct: 399 SYSLMISFLCKAGRVRESY-------TALQEMKKEGLAPDVSLYNALIEACCKAEMIRPA 451
Query: 142 LKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
KL+ M GC N TT+ VLIR L + EE + D+M G D+ Y +
Sbjct: 452 KKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEP--DETIYMSLI 509
Query: 202 TILCGIERVEHALKVF 217
LC ++E A++VF
Sbjct: 510 EGLCKETKIEAAMEVF 525
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 13/247 (5%)
Query: 25 GFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDG--KLEEARRLAGEMYRGGFELGVV 81
G + A R K++ + + P + LI C +EEA R EM R GF
Sbjct: 727 GLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRE 786
Query: 82 AYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDA 141
L C+CE+ KD A+ L + G P V +++ I LC+I K E+A
Sbjct: 787 LVQDYLGCLCEVGNTKD-------AKSCLDSLGKIGFPVTV-AYSIYIRALCRIGKLEEA 838
Query: 142 LKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
L ++ T+ ++ L Q L++ + ++ MK G + Y +
Sbjct: 839 LSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGV--HVYTSLI 896
Query: 202 TILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+++E L+ M+ + CEP + TY ++ + +V++A F + RG +
Sbjct: 897 VYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTS 956
Query: 262 VTPKEYA 268
K Y+
Sbjct: 957 PDFKTYS 963
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 10/212 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
L+K +CV GK++EA L E+ L + ++ +C R D +
Sbjct: 335 LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDAL--------EI 386
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
V++ R + + ++I+ + AL+ F + + G P +T+ +++ L++
Sbjct: 387 VDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKL 446
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
+ E+G + + M G D A + G RV A KVF+ M+ G +P K
Sbjct: 447 KQFEKGCNLFNEMIENGIEP--DSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWK 504
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
+Y + + +L +R D+ +F++ + + +
Sbjct: 505 SYSIFVKELCRSSRYDEIIKIFNQMHASKIVI 536
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 111/267 (41%), Gaps = 23/267 (8%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAE--RMVKDLARVIF-PDEAMCDMLIKGWCVDG 59
+D GL + K ++ LC K + E R +++ R F PD + + C G
Sbjct: 740 KDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVG 799
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF--LLHSEAEKVLVEMDYRG 117
++A+ + + GF + VAY+ + +C + + ++ L E E+ L++
Sbjct: 800 NTKDAKSCLDSLGKIGFPV-TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQ---- 854
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
T+ ++ L + + AL + M E G P + LI ++ +LE+
Sbjct: 855 -----YTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVL 909
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCG---IERVEHALKVFAMMKADGCEPGIKTYDL 234
E +M+ S+ + ++CG + +VE A F M+ G P KTY
Sbjct: 910 ETCQKMEGESCEPSV-----VTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSK 964
Query: 235 LMSKLGAHNRVDKANALFHEAQSRGLA 261
++ L + + A L E +G+A
Sbjct: 965 FINCLCQACKSEDALKLLSEMLDKGIA 991
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 88/228 (38%), Gaps = 9/228 (3%)
Query: 21 LCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGV 80
LC G A+ + L ++ FP + I+ C GKLEEA E+ E +
Sbjct: 795 LCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEA---LSELASFEGERSL 851
Query: 81 VAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
+ V L ++ D L +KV M G V + LI K ++ E
Sbjct: 852 LDQYTYGSIVHGLLQRGD---LQKALDKV-NSMKEIGTKPGVHVYTSLIVYFFKEKQLEK 907
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
L+ +M C P+ T+ +I ++EE M+ G S D K Y +F
Sbjct: 908 VLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERG--TSPDFKTYSKF 965
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
+ LC + E ALK+ + M G P + + L + D A
Sbjct: 966 INCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLA 1013
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G V +N +++ + R + +L M + GC + T+ +LI +A ++ +G
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ ++M+ +GF LD AY + LC R + AL+ + M G G++TY +L+
Sbjct: 244 LLVFEKMRKSGF--ELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLL 301
Query: 237 SKLGAHNRVDKANAL 251
+ +VD ++
Sbjct: 302 DCIAKSEKVDVVQSI 316
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKL 61
+D G DR ++ C KG+ A ++ ++ + + P+E +++I G G++
Sbjct: 310 KDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEI 369
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
EM R G+ +++ N M+ C + + F ++ M GV N
Sbjct: 370 SLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAF-------EIFKNMSETGVTPN 422
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
T+N LI CK K E LKL+ + G P+ + L+R+L
Sbjct: 423 AITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 17/154 (11%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + +I+G+C G L AR+L EM + G AYN M+
Sbjct: 316 PDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHG------------H 363
Query: 103 HSEAEKVLVEMDYRGVPRN-----VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
E LVE Y + RN + + N +I C K+++A ++F M E G PN
Sbjct: 364 FKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNA 423
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
T+ LI+ + ++E+G ++ +K+ G S
Sbjct: 424 ITYNALIKGFCKENKVEKGLKLYKELKALGLKPS 457
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 103/260 (39%), Gaps = 10/260 (3%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D ++ ++ LC G S ++K L + + P + + LI G+C G +
Sbjct: 212 DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVL 271
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
M + Y ++ +C +Q EA + + +G + + +
Sbjct: 272 HTMIAWNHFPSMYIYQKIIKGLCMNKKQL-------EAYCIFKNLKDKGYAPDRVVYTTM 324
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I C+ A KL+ M + G PNE + V+I ++ + + + M G+
Sbjct: 325 IRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY 384
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
G ++ + + C + + A ++F M G P TY+ L+ N+V+K
Sbjct: 385 GGTM--LSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKG 442
Query: 249 NALFHEAQSRGLAVTPKEYA 268
L+ E ++ GL + YA
Sbjct: 443 LKLYKELKALGLKPSGMAYA 462
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 11/225 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D + DML+KG+ G +EE R+ E+ GF + VV N +L+ + +L +D + ++
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
S +V G+ N TFN+L C + +M E G P+ T+ L
Sbjct: 225 SVMCRV-------GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
+ S + RL+E + M D Y + LC RV A + F M
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVP--DLVTYTSLIKGLCKDGRVREAHQTFHRMVDR 335
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
G +P +Y+ L+ + ++ L HE G +V P +
Sbjct: 336 GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEML--GNSVVPDRFT 378
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P+ ++L +C D E +M GFE +V YN ++ C R K+ F
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L+ K+ M R V ++ T+ LI LCK + +A + FHRM + G P+ ++
Sbjct: 292 YLY----KI---MYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 161 VVLIRSLYQAARLEEGDEMIDRM 183
LI + + +++ +++ M
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEM 367
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 32/252 (12%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + +V C +G A + K + R + PD LIKG C DG++ EA
Sbjct: 266 GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREA 325
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC-ELCRQKDPFLLHS------------------- 104
+ M G + ++YN ++ C E Q+ LLH
Sbjct: 326 HQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEG 385
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHR-MGEWGCYP 155
A +VE+ V E + LI +LC+ K A L R + E G
Sbjct: 386 FVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEA 445
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
T+ LI SL + +EE + ++K+ LD K Y + LC I R A
Sbjct: 446 KPETYNNLIESLSRCDAIEEALVLKGKLKNQ--NQVLDAKTYRALIGCLCRIGRNREAES 503
Query: 216 VFAMMKADGCEP 227
+ A M +P
Sbjct: 504 LMAEMFDSEVKP 515
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M R + YN+M+D C+ R D A+++L M +G +V TF+ LI
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDD-------AKRMLDSMASKGCSPDVVTFSTLIN 53
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
CK ++ ++ +++F M G N T+ LI Q L+ ++++ M S G
Sbjct: 54 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 113
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
Y F +L G+ + K FA+++
Sbjct: 114 D-----YITFHCMLAGLCSKKELRKAFAILE 139
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
IFP + +I G+C ++++A+R+ M G VV ++ +++ C+ R +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
++ EM RG+ N T+ LI C++ + A L + M G P+ TF
Sbjct: 66 -------EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 118
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSA 186
++ L L + +++ ++ +
Sbjct: 119 HCMLAGLCSKKELRKAFAILEDLQKS 144
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 15/211 (7%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ +E +++G+ G +A + G ++ + Y A+L C+ R +
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS-- 712
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
A V EM R +PRN +N+LI + +A L +M + G P+ T+
Sbjct: 713 -----ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 767
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV---EHALKVF 217
I + +A + + I+ M++ G ++ + T++ G R E AL +
Sbjct: 768 TSFISACSKAGDMNRATQTIEEMEALGVKPNIK-----TYTTLIKGWARASLPEKALSCY 822
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
MKA G +P Y L++ L + + +A
Sbjct: 823 EEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
M+I G+ A + +M + G + V+ YN ++ C + E +K
Sbjct: 523 SMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK 582
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ +R R TF +I K +L++F M GC P TF LI L
Sbjct: 583 ----LRHRPTTR---TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ ++E+ E++D M AG A ++ Y + + + A + F ++ +G +
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSA--NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
I TY+ L+ R+ A A+ E +R +
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNI 725
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 118/298 (39%), Gaps = 37/298 (12%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKL 61
++ G++ + V+V G A A+ + R+ + ++ +I C +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH------------------ 103
E A L EM G + + Y+ M+D + +K ++
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 104 ----------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGC 153
S+A +V M GV N++T++++I K++ +A +F M + G
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 154 YPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER---V 210
P+ + +I + ++ + + M+ + F+ I+ G + +
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL-----RHRPTTRTFMPIIHGYAKSGDM 605
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+L+VF MM+ GC P + T++ L++ L +++KA + E G++ Y
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 113/290 (38%), Gaps = 25/290 (8%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K D ++ C G A + VK++ ++ P +I G+ G + +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ M R G V +N +++ + E RQ + +A ++L EM GV N T
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEK-RQME------KAVEILDEMTLAGVSANEHT 661
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ ++ + T A + F R+ G + T+ L+++ ++ R++ + M
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 185 SAGFGASLDKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
+ + + + ++ G R V A + MK +G +P I TY +S
Sbjct: 722 ARNI-----PRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYAVDPRYXXXXXXXXXXXRETLPEK 291
+++A E ++ G V P R +LPEK
Sbjct: 777 AGDMNRATQTIEEMEALG---------VKPNIKTYTTLIKGWARASLPEK 817
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 83/218 (38%), Gaps = 9/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P + LI G ++E+A + EM G Y ++ + F
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAF-- 679
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ + G+ ++ T+ L+ CK + + AL + M N + +
Sbjct: 680 -----EYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNI 734
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + + E ++I +MK G D Y F++ + A + M+A
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKP--DIHTYTSFISACSKAGDMNRATQTIEEMEA 792
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
G +P IKTY L+ + +KA + + E ++ G+
Sbjct: 793 LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 9/189 (4%)
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
+G L AR++ EM + GF Y + CE K EAE++L EM+ G
Sbjct: 317 EGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVK-------EAERLLSEMEESG 369
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
V ETFN LI + E L+ M G P+ + F +++S+ + + +
Sbjct: 370 VSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRAN 429
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
E++ + GF D+ Y + ++ ALK+F M+ PG + + L+
Sbjct: 430 EILTKSIDKGFVP--DEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIV 487
Query: 238 KLGAHNRVD 246
L +V+
Sbjct: 488 GLCTCGKVE 496
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
A KV EM RG N + V + C+ ++A +L M E G P + TF LI
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGC 225
+ E+G E + M + G S A+ + + + IE V A ++ G
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGLMPSC--SAFNEMVKSVSKIENVNRANEILTKSIDKGF 440
Query: 226 EPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
P TY L+ N +D+A LF+E + R ++
Sbjct: 441 VPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMS 476
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 9/218 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + +IK +C G + + EM R G + ++ M+ +
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKS---- 238
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
E KVL M RGV V T+N+ I +LCK +K+++A L M G PN T+
Sbjct: 239 ---DEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTY 295
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI EE ++ M G D + Y+ + LC E AL +
Sbjct: 296 SHLIHGFCNEDDFEEAKKLFKIM--VNRGCKPDSECYFTLIYYLCKGGDFETALSLCKES 353
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
P L++ L ++V++A L + + +
Sbjct: 354 MEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 103 HSEAEKVLVEM-DYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
+ EA++V +EM G+ ++ET+N +I C+ + + M G PN ++F
Sbjct: 167 YKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFG 226
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
++I Y + +E +++ MK G + Y + LC ++ + A + M
Sbjct: 227 LMISGFYAEDKSDEVGKVLAMMKDRGVNIGVS--TYNIRIQSLCKRKKSKEAKALLDGML 284
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ G +P TY L+ + ++A LF +RG
Sbjct: 285 SAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRG 322
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM--GEWGCYPNETTFVVLIR 165
+VL ++D G R +++LI+ LCK+ + +DAL + M G G P +T+ ++
Sbjct: 95 RVLPQID-GGFSRK-NAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTP--STYHPILC 150
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGC 225
SL + ++EE +++ M+S S+D AY FLT C +E A +V ++ DG
Sbjct: 151 SLTRKYKIEEAWRVVESMRSKS--VSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGN 208
Query: 226 EPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
P ++YD L+ +V+ A A+ + G+ V +A
Sbjct: 209 SPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHA 251
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 111/243 (45%), Gaps = 22/243 (9%)
Query: 27 ASYAERMVKDLARVI------FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGV 80
ASY+ + +DL RV+ F + D+LI C G++++A + G+M G L
Sbjct: 84 ASYSSYL-EDLRRVLPQIDGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTP 142
Query: 81 VAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
Y+ +L C L R+ EA +V+ M + V +V +N +T+ C + E
Sbjct: 143 STYHPIL---CSLTRKYKI----EEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELES 195
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
A ++ ++ E G P+ ++ L+ +A ++E ++ RM+ G A+
Sbjct: 196 ASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAH--- 252
Query: 201 LTILCG-IERVEHALKVFAMMKADGCEPGI--KTYDLLMSKLGAHNRVDKANALFHEAQS 257
++ G +E +AL + +M G + + +++ L KL R ++A + E
Sbjct: 253 --VITGLVEGGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVM 310
Query: 258 RGL 260
RGL
Sbjct: 311 RGL 313
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 73/190 (38%), Gaps = 21/190 (11%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKG-FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
R+ + D +++ LC G F L + PD +M+I+ L
Sbjct: 6 RESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----SSL 61
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
A +L EM R G + YN+M+ LC+Q ++A KV ++
Sbjct: 62 GRAEKLYAEMIRRGLVPDTITYNSMIH---GLCKQNKL----AQARKV---------SKS 105
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
TFN LI CK + +D + LF M G N T+ LI Q ++
Sbjct: 106 CSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQ 165
Query: 182 RMKSAGFGAS 191
M S G +S
Sbjct: 166 EMVSNGVYSS 175
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
RSL R +E +E+ M++AG+ D Y Q + LC +R+E A V M+A G
Sbjct: 378 RSLTSVGRFDEAEEITKAMRNAGYEP--DNITYSQLVFGLCKAKRLEEARGVLDQMEAQG 435
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
C P IKT+ +L+ +N +DKA A F +G +
Sbjct: 436 CFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDI 473
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 10/198 (5%)
Query: 45 EAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS 104
+A+ D + + G+ +EA + M G+E + Y+ ++ +C+ R +
Sbjct: 370 KAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLE------- 422
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
EA VL +M+ +G +++T+ +LI CK + + AL F M E G + VLI
Sbjct: 423 EARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLI 482
Query: 165 RSLYQAARLEEGD-EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
+ E +++ +K+A + Y + L I++ E AL + MMK
Sbjct: 483 DGFVIHNKFEGASIFLMEMVKNANVKPW--QSTYKLLIDKLLKIKKSEEALDLLQMMKKQ 540
Query: 224 GCEPGIKTYDLLMSKLGA 241
+ +D ++K G
Sbjct: 541 NYPAYAEAFDGYLAKFGT 558
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH--SEAEK 108
LI+G G + A+ + EM G ++ YN +LD +C+ + + + +
Sbjct: 22 LIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWD 81
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ + +GV NV T+ +I+ CK E+A LF +M E G P+ T+ LIR
Sbjct: 82 LFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR--- 138
Query: 169 QAARLEEGD-----EMIDRMKSAGFGA 190
A L +GD E+I M+S F
Sbjct: 139 --AHLRDGDKAASAELIKEMRSCRFAG 163
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 124/301 (41%), Gaps = 59/301 (19%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDG 59
++G + + + +E LC + F +A E+M+K + V+ E M + +I +C +G
Sbjct: 259 EFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK--SGVLSEGEQMGN-IITWFCKEG 315
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAM-----LDCVCELCRQKDPFLLHSEAEKVLVEMD 114
K EEA + +EL ++ + LC+ A+++L ++
Sbjct: 316 KAEEAYSV--------YELAKTKEKSLPPRFVATLITALCKNDGTITF---AQEMLGDLS 364
Query: 115 YRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE 174
R ++ F+ +I +LC++R +DA L M G P F +++ + + L+
Sbjct: 365 GEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLD 424
Query: 175 EGDEMIDRMKSAGF----------------GASLDKK-----------------AYYQFL 201
E E++ M+S G G +D+ Y+ +
Sbjct: 425 EAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALI 484
Query: 202 TILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK--LGAHNRVDKANALFHEAQSRG 259
C IE + ALK+ M G +P Y+ L+ L A + +KA LF E + +G
Sbjct: 485 RGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDW-EKAEVLFEEMKQKG 543
Query: 260 L 260
L
Sbjct: 544 L 544
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 13/236 (5%)
Query: 29 YAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
+ ERM K + PDE ++ + GK+EE L G++ +A++ +
Sbjct: 243 WFERMYKT---GLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
E + VL EM V NV +N L+ + + K A LF+ M
Sbjct: 300 MFGEAGD-------YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 352
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
E G PNE T L++ +A + ++ + MK+ + +D Y L + I
Sbjct: 353 LEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKW--PMDFILYNTLLNMCADIG 410
Query: 209 RVEHALKVFAMMKAD-GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
E A ++F MK C P +Y +++ G+ + +KA LF E G+ V
Sbjct: 411 LEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 12/171 (7%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD LI G +G+L R + G + R + +A++D C+ + F++
Sbjct: 366 PDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMV 425
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A + ++V + +IT L + AL+LF RM E G PN T +
Sbjct: 426 FKTATE-----------KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLA 474
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHA 213
++ + + +EEG + + MK FG + + Y + +LC RVE A
Sbjct: 475 VLTACSHSGLVEEGLHVFNHMKDK-FGFDPETEHYGSLVDLLCRAGRVEEA 524
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDG 59
M + YG++ D + ++ LC G S + +V ++ R I P A ++I G+ +
Sbjct: 172 MPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEE 231
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVE--MDYRG 117
K +E R++ M G +GV YN M+ C+C+ R+K S K L++ M R
Sbjct: 232 KFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCK--RKK------SAEAKALIDGVMSCRM 283
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
P +V T+++LI C ++A+ LF M G P+ + LI L + E
Sbjct: 284 RPNSV-TYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETA 341
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 9/211 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + +I+ C G + + EM R + ++ M+D +++ F
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGF----YKEEKF 233
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
E KV+ MD GV V T+N++I LCK +K+ +A L + PN T+
Sbjct: 234 ---DEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTY 290
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+LI L+E + + M G+ D + Y+ + LC E AL +
Sbjct: 291 SLLIHGFCSEENLDEAMNLFEVMVCNGYKP--DSECYFTLIHCLCKGGDFETALILCRES 348
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
P L++ L + ++VD+A L
Sbjct: 349 MEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 9/222 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + +I + EAR L EM G V+Y+ +L E F
Sbjct: 256 ITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVE----NHKF 311
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L EA V EM ++ T N++I ++ ++A +LF + + PN ++
Sbjct: 312 L---EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY 368
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
++R +A E + M+ ++ Y + I E A + M
Sbjct: 369 NTILRVYGEAELFGEAIHLFRLMQRKDIEQNV--VTYNTMIKIYGKTMEHEKATNLVQEM 426
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
++ G EP TY ++S G ++D+A LF + +S G+ +
Sbjct: 427 QSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 468
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D C+++I + ++EA RL + + E VV+YN +L E L
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE-------LF 381
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
EA + M + + +NV T+N +I K + E A L M G PN T+ +
Sbjct: 382 GEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTI 441
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV---EHALKVFAMM 220
I +A +L+ + +++S+ G +D+ Y T++ ERV HA ++ +
Sbjct: 442 ISIWGKAGKLDRAATLFQKLRSS--GVEIDQVLYQ---TMIVAYERVGLMGHAKRLLHEL 496
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
K P +T +++K G R ++A +F +A G
Sbjct: 497 KLPDNIPR-ETAITILAKAG---RTEEATWVFRQAFESG 531
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR-LEEGDE 178
R+V +N I+ L ++ +DA +++ M + YP+ T +LI +L +A R +E E
Sbjct: 271 RDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWE 330
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+ ++M G S D + + C E AL + M+ G Y+ LM
Sbjct: 331 IFEKMSEKGVKWSQD--VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDA 388
Query: 239 LGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
N +++ LF E + +GL + Y +
Sbjct: 389 YNKSNHIEEVEGLFTEMRDKGLKPSAATYNI 419
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 97/230 (42%), Gaps = 11/230 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGK-LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP 99
++PD C +LI G+ +E + +M G + + ++ C+ +++
Sbjct: 304 VYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEA 363
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
++ +E EK +G+ N +N L+ K E+ LF M + G P+ T
Sbjct: 364 LVIQTEMEK-------KGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAAT 416
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV-EHALKVFA 218
+ +L+ + + + + + ++ M+ G ++ K+Y ++ +++ + A F
Sbjct: 417 YNILMDAYARRMQPDIVETLLREMEDLGLEPNV--KSYTCLISAYGRTKKMSDMAADAFL 474
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
MK G +P +Y L+ +KA A F E G+ + + Y
Sbjct: 475 RMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYT 524
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 9/219 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
+I G+C +G + RL E+ G + V N ++D + DP +E+ +
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP----AESIGWI 336
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ D + +V T+N+LI LCK K E A+ + G PN ++ LI++ ++
Sbjct: 337 IANDCK---PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKS 393
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
+ +++ +M A G D Y + L ++ A+ + + G P
Sbjct: 394 KEYDIASKLLLQM--AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAA 451
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
Y++LMS L R A LF E R + YA
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 95/265 (35%), Gaps = 45/265 (16%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERM-VKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G K D + +++ L G A M VK + R + PD A+ +ML+ G C G+ A
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ L EM Y ++D R D EA KV +GV +V
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLID---GFIRSGD----FDEARKVFSLSVEKGVKVDVVH 522
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
N +I C+ ++AL +RM E P++ T+ +I +
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQ-------------- 568
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ + A+K+F M+ + C+P + TY L++
Sbjct: 569 -----------------------QDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGD 605
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
A F E Q R L Y
Sbjct: 606 FKMAEETFKEMQLRDLVPNVVTYTT 630
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 17/238 (7%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLE 62
D G+ D +++ LC G A+ + + L R I PD + LI G+ G +
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
EAR++ G ++ VV +NAM+ CR + EA + M+ + +
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIK---GFCRSG----MLDEALACMNRMNEEHLVPDK 555
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T++ +I K + A+K+F M + C PN T+ LI + +E
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIER----VEHALKVFAMMKADGCEPGIKTYDLLM 236
M+ ++ + T++ + + +E A+ + +M + C P T++ L+
Sbjct: 616 MQLRDLVPNV-----VTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 21/232 (9%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD C+ L+ +L +AR++ EM G + + ++ +C +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGK------- 220
Query: 103 HSEAEKVLVEMDY-RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
E + L+E + +G N+ +N +I CK+ E+A +F + G P TF
Sbjct: 221 -VEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFG 279
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV----- 216
+I + D ++ +K G S+ FL + + H KV
Sbjct: 280 TMINGFCKEGDFVASDRLLSEVKERGLRVSV------WFLNNIID-AKYRHGYKVDPAES 332
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+ A+ C+P + TY++L+++L + + A EA +GL YA
Sbjct: 333 IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYA 384
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+V TFN+LI C+ K + AL LF M E GC PN +F LIR + ++EEG +M
Sbjct: 227 DVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMA 286
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
M G + + LC RV+ A + + P Y L+ KL
Sbjct: 287 YEM--IELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLC 344
Query: 241 AHNRVDKANALFHEAQSRG 259
N+ +A + E +G
Sbjct: 345 GENKAVRAMEMMEELWKKG 363
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 9/212 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ + LI+G+ GK+EE ++A EM G ++D +C R D L
Sbjct: 261 PNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGL 320
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
VL ++ R +P + + L+ LC K A+++ + + G P
Sbjct: 321 ------VLDLLNKRVLPSEFD-YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ L ++ R E+ +++M +AG D + L LC + A ++ + +
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILP--DSVTFNLLLRDLCSSDHSTDANRLRLLASS 431
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
G EP TY +L+S R + L +E
Sbjct: 432 KGYEPDETTYHVLVSGFTKEGRRKEGEVLVNE 463
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 104/250 (41%), Gaps = 13/250 (5%)
Query: 14 LKVVVEKLCSKGFASYAERMVKDLARVI--FPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++ C YA + R+I P+ + + ++ G+ G +++A R M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
+ + V +N +++ C + F L A + EM +G NV +FN LI
Sbjct: 220 GKERAKPDVCTFNILINGYC----RSSKFDL---ALDLFREMKEKGCEPNVVSFNTLIRG 272
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI-DRMKSAGFGA 190
K E+ +K+ + M E GC +E T +L+ L + R+++ ++ D + +
Sbjct: 273 FLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPS 332
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
D Y + LCG + A+++ + G P L+ L R +KA+
Sbjct: 333 EFD---YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 251 LFHEAQSRGL 260
+ + G+
Sbjct: 390 FMEKMMNAGI 399
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLE 62
+ G + + +++V+ LC +G A +V DL + + P E L++ C + K
Sbjct: 291 ELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAV 350
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
A + E+++ G +A +++ + + R + +A + +M G+ +
Sbjct: 351 RAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTE-------KASGFMEKMMNAGILPDS 403
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
TFN+L+ +LC + DA +L G P+ETT+ VL+ + R +EG+ +++
Sbjct: 404 VTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNE 463
Query: 183 M 183
M
Sbjct: 464 M 464
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 90/231 (38%), Gaps = 49/231 (21%)
Query: 76 FELGVVAYNAMLD-CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
E +V YNA+L+ CV P L V VE+ G+ N T+ + + + +
Sbjct: 337 LEPDLVVYNAILNACV--------PTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLE 388
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
K + F +M G P T+ VL+R+L++ ++EE E + M+ G +
Sbjct: 389 SGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGT--G 446
Query: 195 KAYYQFLTILCGIER------------------------------------VEHALKVFA 218
YY+ LC R V+ + +F
Sbjct: 447 SVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQ 506
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG-LAVTPKEYA 268
MK D C+P I T ++++ G ++ +A LF E SR + P EY
Sbjct: 507 YMK-DKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYT 556
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 110/262 (41%), Gaps = 14/262 (5%)
Query: 3 RDYGLKRDRGSLKV----VVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCV 57
RD + D+ L + VV LC + AE +V D+ + I PD + +I+G
Sbjct: 279 RDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRK 338
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
+ + +A + +M + + V +++L C C++ + + L E + + +D
Sbjct: 339 NMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRV- 397
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
+NV L K+ K E+A++LF M G P+ + LI + +
Sbjct: 398 ------CYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAF 451
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+++ M G G + D Y L + A + MM+ G +P T+++++
Sbjct: 452 DLMIEMD--GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIE 509
Query: 238 KLGAHNRVDKANALFHEAQSRG 259
L +DKA A + + +
Sbjct: 510 GLIDAGELDKAEAFYESLEHKS 531
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 77/201 (38%), Gaps = 9/201 (4%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
GK + RL EM + GF + YN +L L P A +L M GV
Sbjct: 271 GKTDRLYRLLDEMVKDGFSPDLYTYNILLH---HLATGNKPL----AALNLLNHMREVGV 323
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
V F LI L + K E + GC P+ + V+I LE+ +E
Sbjct: 324 EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEE 383
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
M M G ++ Y + C + + A + M++ GC P Y L++
Sbjct: 384 MFKEMTEKGQLPNV--FTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNN 441
Query: 239 LGAHNRVDKANALFHEAQSRG 259
L +V +A+ + + +G
Sbjct: 442 LKNAGKVLEAHEVVKDMVEKG 462
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 13/148 (8%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSE---AE 107
LI G GKLE + E + G VV Y M+ ++ E AE
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT----------GYISGGELEKAE 382
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
++ EM +G NV T+N +I C K ++A L M GC PN + L+ +L
Sbjct: 383 EMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
Query: 168 YQAARLEEGDEMIDRMKSAGFGASLDKK 195
A ++ E E++ M G L K
Sbjct: 443 KNAGKVLEAHEVVKDMVEKGHYVHLISK 470
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 49/266 (18%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKL 61
R GL D + + V+ LC + + E ++ ++ R I DE ++++ + +G +
Sbjct: 402 RKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLV 461
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV-EMDYRGVPR 120
+A+ L F+L V + L V ++ +K L EAE V + + G
Sbjct: 462 VQAKALFER-----FQLDCVLSSTTLAAVIDVYAEKG---LWVEAETVFYGKRNMSGQRN 513
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+V +NV+I K + E AL LF M G +P+E T+ SL+Q
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTY----NSLFQ----------- 558
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
+L G++ V+ A ++ A M GC+PG KTY +++
Sbjct: 559 ----------------------MLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYV 596
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKE 266
+ A L+ + G V P E
Sbjct: 597 RLGLLSDAVDLYEAMEKTG--VKPNE 620
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ LI + G+L +A L EM + G + V +N M+ C SEAE
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMI----HTCGTHGHL---SEAES 361
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+L +M+ +G+ + +T+N+L++ E AL+ + ++ + G +P+ T ++ L
Sbjct: 362 LLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILC 421
Query: 169 QAARLEEGDEMIDRM 183
Q + E + +I M
Sbjct: 422 QRKMVAEVEAVIAEM 436
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 21 LCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELG 79
C +G A+ AE + + + D+ M L+K +C D + A RL M FEL
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELD 306
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
+N ++ +L ++ S+ K +GV NV T++++I + CK +
Sbjct: 307 PCIFNTLIHGFMKLGMLDKGRVMFSQMIK-------KGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 140 DALKLF-HRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
AL+LF + G N + LI Y+ +++ +++ RM G D Y+
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP--DHITYF 417
Query: 199 QFLTILCGIERVEHALKVFAMMKADGC 225
L +L +++A+ + + +GC
Sbjct: 418 VLLKMLPKCHELKYAMVILQSILDNGC 444
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 14 LKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
L + L + G S+A ++ + + I P+ + + +I G+C G+L+EA M +
Sbjct: 763 LVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQK 822
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMD-YRGV---PRNVETFNVLI 129
G +V Y ++ H EA + +D + G P V ++ L+
Sbjct: 823 EGIVPNLVTYTILMKS-------------HIEAGDIESAIDLFEGTNCEPDQV-MYSTLL 868
Query: 130 TNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFG 189
LC ++ DAL L M + G PN+ ++ L++ L + E +++ M
Sbjct: 869 KGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDM------ 922
Query: 190 ASLD----KKAYYQFLTILCGIERVEHALKVFAMMKADG 224
A+LD + + ILC +++ A +FA+M G
Sbjct: 923 AALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 9/204 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + LI C+ GK ++A + E+ G E Y ++ C+ R D
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDD---- 342
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A ++ EM Y G + +N L+ K RK +A +LF +M + G + T+ +
Sbjct: 343 ---AMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNI 399
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L++ R E G + +K G +D + LC ++E A+K+ M+
Sbjct: 400 LIDGLFRNGRAEAGFTLFCDLKKK--GQFVDAITFSIVGLQLCREGKLEGAVKLVEEMET 457
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVD 246
G + T L+ R D
Sbjct: 458 RGFSVDLVTISSLLIGFHKQGRWD 481
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
G +L YN+M+ +K F A VL +M ++ T+NV+I L
Sbjct: 624 GVTDLTSYTYNSMMSSFV----KKGYF---QTARGVLDQMFENFCAADIATYNVIIQGLG 676
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
K+ + + A + R+ + G Y + + LI +L +A RL+E ++ D MKS G D
Sbjct: 677 KMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINP--D 734
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
+Y + + +++ A K M GC P T D ++ LG
Sbjct: 735 VVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLG 780
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 31/237 (13%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCE---LCR 95
R+ F D A + +I G+ G++E+AR E++ E V++NAM+ E L +
Sbjct: 149 RMPFKDAASWNTMITGYARRGEMEKAR----ELFYSMMEKNEVSWNAMISGYIECGDLEK 204
Query: 96 QKDPFLL---------------HSEAEKV-LVEMDYR--GVPRNVETFNVLITNLCKIRK 137
F + + +A+KV L E ++ V +N+ T+N +I+ + +
Sbjct: 205 ASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSR 264
Query: 138 TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAY 197
ED LKLF M E G PN + + + + L+ G ++ + + D A
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN--DVTAL 322
Query: 198 YQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+++ C + A K+F +MK + + ++ ++S H DKA LF E
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMK----KKDVVAWNAMISGYAQHGNADKALCLFRE 375
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
++EK+ EM RG+ + TF +I+ + + A++ F +M +GC P+ T +I
Sbjct: 193 KSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMI 252
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
+ +A ++ + DR ++ + +D + + I + L ++ MKA G
Sbjct: 253 DAYGRAGNVDMALSLYDRARTEKW--RIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+P + Y+ L+ +G R +A ++ + + G YA
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
EM GV N+ +N LI ++ + ++ A ++ + G PN +T+ L+R+ +A
Sbjct: 305 EMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRAR 364
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER-VEHALKVFAMMK-ADGCEPGI 229
++ + MK G ++ Y L +C R V+ A ++F MK + C+P
Sbjct: 365 YGDDALAIYREMKEKGLSLTV---ILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDS 421
Query: 230 KTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
T+ L++ RV +A A + + G T
Sbjct: 422 WTFSSLITVYACSGRVSEAEAALLQMREAGFEPT 455
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG-GFELGVVAYNAMLDCVCELCRQKDP 99
I P+ + ++ + +G+ E R+ EM G V +YN +++ C
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARG----- 295
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
L SEAEKV EM RGV ++ +N +I LC + A +LF MG G T
Sbjct: 296 --LMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLT 353
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILC----GIERVEHALK 215
+ L+ +A ++ G + MK GF A D + LC G VE A
Sbjct: 354 YEHLVNGYCKAGDVDSGLVVYREMKRKGFEA--DGLTIEALVEGLCDDRDGQRVVEAADI 411
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
V ++ P Y+LL+ +L ++D+A + E +G + + Y
Sbjct: 412 VKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETY 463
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 19/205 (9%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVC---ELCRQKDP 99
P+ ++L++ +C G + EA ++ EM G +VAYN M+ +C E+ + K+
Sbjct: 279 PNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKEL 338
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
F +M +G+ T+ L+ CK + L ++ M G + T
Sbjct: 339 FR----------DMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLT 388
Query: 160 FVVLIRSL---YQAARLEEGDEMI-DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
L+ L R+ E +++ D ++ A F S + Y + LC +++ AL
Sbjct: 389 IEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPS--RNCYELLVKRLCEDGKMDRALN 446
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLG 240
+ A M G +P +TY + G
Sbjct: 447 IQAEMVGKGFKPSQETYRAFIDGYG 471
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 7/195 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P+ ++L++ WC K+EEA + +M G V YN + C ++ +
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATC---YVQKGETV 240
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
SE + +V M + P N T +++ C+ + D L+ RM E N F
Sbjct: 241 RAESEVVEKMV-MKEKAKP-NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI + + DE++ MK A D Y + +E A +VF M
Sbjct: 299 NSLINGFVEVMDRDGIDEVLTLMKECNVKA--DVITYSTVMNAWSSAGYMEKAAQVFKEM 356
Query: 221 KADGCEPGIKTYDLL 235
G +P Y +L
Sbjct: 357 VKAGVKPDAHAYSIL 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ C +++ G+C +G++ + R M E +V +N++++ E+ +
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV-------MD 310
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
++VL M V +V T++ ++ E A ++F M + G P+ + +
Sbjct: 311 RDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 370
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTIL---CGIERVEHALKVFAM 219
L + +A ++ +E+++ + + F T++ C ++ A++VF
Sbjct: 371 LAKGYVRAKEPKKAEELLETLIVE------SRPNVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 220 MKADGCEPGIKTYDLLM 236
M G P IKT++ LM
Sbjct: 425 MCKFGVSPNIKTFETLM 441
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 8/180 (4%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G+ EA+ + + G +++Y +L + QK + ++ E++ G
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLL---AAMTVQKQ----YGSISSIVSEVEQSGT 111
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+ FN +I + EDA++ +M E G P +T+ LI+ A + E E
Sbjct: 112 KLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE 171
Query: 179 MIDRMKSAG-FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
++D M G + + + + C ++VE A +V M+ G P TY+ + +
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
++ W G +E+A ++ EM + G + AY+ + R K+P +AE++L
Sbjct: 336 VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAK---GYVRAKEP----KKAEELL 388
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ P NV F +I+ C +DA+++F++M ++G PN TF L+ +
Sbjct: 389 ETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEV 447
Query: 171 ARLEEGDEMIDRMKSAG 187
+ + +E++ M+ G
Sbjct: 448 KQPWKAEEVLQMMRGCG 464
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
AE +LV M+ G N+ +N LIT KI K E A LFHR+ G P+ET++ +I
Sbjct: 333 AESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIE 392
Query: 166 SLYQAARLEEGDEMIDRMKSAGF 188
+A EE +K G+
Sbjct: 393 GWGRADNYEEAKHYYQELKRCGY 415
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 97/216 (44%), Gaps = 10/216 (4%)
Query: 45 EAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS 104
E +I + G E A+++ EM + V+++NA+L L ++ D
Sbjct: 109 EGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY-RLSKKFDV----- 162
Query: 105 EAEKVLVEMDYR-GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
E++ E+ + + ++ ++N LI LC+ +A+ L + G P+ TF L
Sbjct: 163 -VEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTL 221
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
+ S Y + E G+E+ +M ++D + Y L L + + + +F +KA
Sbjct: 222 LLSSYLKGQFELGEEIWAKMVEK--NVAIDIRTYNARLLGLANEAKSKELVNLFGELKAS 279
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
G +P + +++ ++ ++D+A A + E G
Sbjct: 280 GLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHG 315
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 9/177 (5%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + LIK C L EA L E+ G + +V +N +L K F
Sbjct: 176 IKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS----SYLKGQF 231
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L E++ +M + V ++ T+N + L K+++ + LF + G P+ +F
Sbjct: 232 EL---GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSF 288
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
+IR +++E + + G+ DK + L +C E A+++F
Sbjct: 289 NAMIRGSINEGKMDEAEAWYKEIVKHGYRP--DKATFALLLPAMCKAGDFESAIELF 343
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
+A K+L EM+ G+ + ++N++I+ K RK++ AL ++ M + C PN T++ L+
Sbjct: 408 KAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
RS + +E ++++ +++ D Y + +C + A +++ M+ G
Sbjct: 468 RSCIWGSLWDEVEDILKKVEP-------DVSLYNAAIHGMCLRREFKFAKELYVKMREMG 520
Query: 225 CEPGIKTYDLLMSKLGAHNR 244
EP KT +++ L H +
Sbjct: 521 LEPDGKTRAMMLQNLKKHQK 540
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 86/225 (38%), Gaps = 11/225 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++L+ GK++ RL EM R GF YN +L L + P
Sbjct: 252 PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI---LGKGNKPL-- 306
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A L M G+ +V + LI L + E M + GC P+ + V
Sbjct: 307 --AALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+I + L++ EM M G ++ Y + LC A + M++
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQLPNV--FTYNSMIRGLCMAGEFREACWLLKEMES 422
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG--LAVTPK 265
GC P Y L+S L ++ +A + E +G + + PK
Sbjct: 423 RGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPK 467
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 62/150 (41%), Gaps = 13/150 (8%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P LI G G LE + EM + G VV Y M+ +
Sbjct: 320 IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMIT----------GY 369
Query: 101 LLHSE---AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
++ E A+++ EM +G NV T+N +I LC + +A L M GC PN
Sbjct: 370 VVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNF 429
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
+ L+ L +A +L E ++I M G
Sbjct: 430 VVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 82 AYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDA 141
+YNA+L+ + + + K E V +M G +V T+N+L+ ++ K +
Sbjct: 221 SYNAILNSLLGVKQYK-------LIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRF 273
Query: 142 LKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
+LF M G P+ T+ +L+ L + + ++ MK G S+ +
Sbjct: 274 DRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV-----LHYT 328
Query: 202 TILCGIERVEH--ALKVF--AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQS 257
T++ G+ R + A K F M+KA GC P + Y ++++ +DKA +F E
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKA-GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTV 387
Query: 258 RG 259
+G
Sbjct: 388 KG 389
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 6/176 (3%)
Query: 78 LGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRK 137
+ +AYN +L+ + E + + L +K R + N+ TFNV++ C K
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFDAVKKE--HNPPRHLAVNLGTFNVMVNGYCAGGK 365
Query: 138 TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAY 197
E+A+++F +MG++ C P+ +F L+ L L E +++ M+ +
Sbjct: 366 FEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPD---EYT 422
Query: 198 YQFLTILCGIE-RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
Y L C E +++ + M P + Y+ L +L ++D A + F
Sbjct: 423 YGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF 478
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELG--VVAYNAMLDCVCELCRQKDPFLLHSEA 106
++++ G+C GK EEA + +M G F+ +++N +++ +C D LL +EA
Sbjct: 354 NVMVNGYCAGGKFEEAMEVFRQM--GDFKCSPDTLSFNNLMNQLC------DNELL-AEA 404
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
EK+ EM+ + V + T+ +L+ K K ++ + M E PN + L
Sbjct: 405 EKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQ 464
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
L +A +L++ D M S +D +AY + L R++ LK+ M D
Sbjct: 465 LIKAGKLDDAKSFFDMMVSK---LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDD 518
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 124 TFNVLITNLCKIRKTEDALKLFHRM--GEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
++ LI LCK+ + +DAL L + M GE+G + F ++ +L + R+EE +++
Sbjct: 127 SYETLIARLCKLGRIDDALVLINDMAIGEFGL--STCVFHPILNTLTKKNRIEEAWRVVE 184
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG---CEPGIKTYDLLMSK 238
M+S +D +Y FLT C V A +V M+ + P +TYD L+
Sbjct: 185 LMRSHAI--PVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLG 242
Query: 239 LGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
RV+ A A+ + GL+V +A
Sbjct: 243 ACKSGRVEAAMAILRRMEEEGLSVLYATHA 272
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 26/211 (12%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD C LI G+ G +EA L E+ G + V +L EL +
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Query: 103 HSEAEKVLVEMD-----------------------YRGVP-RNVETFNVLITNLCKIRKT 138
HS ++ +E+D + G+P +N+ +FN LI L
Sbjct: 331 HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFA 390
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
A + F + E G P+E TF L+ + + L +G E+ +RMKS FG + Y
Sbjct: 391 STAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE-FGIEPQTEHYV 449
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGI 229
+ ++ ++E A + F M + GI
Sbjct: 450 YMVKLMGMAGKLEEAFE-FVMSLQKPIDSGI 479
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ +A+K+ E+ G+ +V T+NV I LCK E ALK+ M + G PN T+ +
Sbjct: 302 YPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNI 361
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDK-----KAYYQFLTILCGIERVEHALKVF 217
LI++L +A L + M++ G + AY + ++C +E A +
Sbjct: 362 LIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
Query: 218 AMMKADGCEPGIK 230
+K+ E I
Sbjct: 422 VFVKSSRIEEVIS 434
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 9/190 (4%)
Query: 78 LGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRK 137
L YN ML + QK F H + + +EM GVP N T+ +++++ K
Sbjct: 256 LSTSVYNFMLSSL-----QKKSF--HGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGF 308
Query: 138 TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAY 197
E+ALK F M G P E T+ +I +A E+ + + M+S G S A
Sbjct: 309 KEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCA- 367
Query: 198 YQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQS 257
L++ E AL +FA M+ + L++ G A ++F E +
Sbjct: 368 -TMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETER 426
Query: 258 RGLAVTPKEY 267
L K Y
Sbjct: 427 LNLLADEKTY 436
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/219 (18%), Positives = 87/219 (39%), Gaps = 11/219 (5%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P +L+ GK EA ++ EL V YN ++ + E + +
Sbjct: 737 PGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQC---- 792
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A ++ M GVP +++T+N +I+ + + + A+++F G Y +E +
Sbjct: 793 ---ASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTN 849
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHAL-KVFAMMK 221
+I + ++ E + M+ G Y + +C R+ H + ++ M+
Sbjct: 850 MIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS---YNMMVKICATSRLHHEVDELLQAME 906
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+G + TY L+ ++ +A + +G+
Sbjct: 907 RNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 2/130 (1%)
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
EDA LF E GC P T +L+ +L + E E I R LD Y
Sbjct: 721 EDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREA-EHISR-TCLEKNIELDTVGYN 778
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ + +++ A +++ M G I+TY+ ++S G ++DKA +F A+
Sbjct: 779 TLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRS 838
Query: 259 GLAVTPKEYA 268
GL + K Y
Sbjct: 839 GLYLDEKIYT 848
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 18/158 (11%)
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
SEA +V+ M G+ +V +++L++ + + + A+ LF++M + GC PN T+ L
Sbjct: 229 SEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSL 288
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCG--------IERVEHALK 215
I+ ++E ++ +++S G + +LC + R E A K
Sbjct: 289 IKGFVDLGMVDEAFTVLSKVQSEGLAPDI----------VLCNLMIHTYTRLGRFEEARK 338
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
VF ++ P T+ ++S L + D + H
Sbjct: 339 VFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITH 376
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 97/239 (40%), Gaps = 16/239 (6%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R + PD+ ++ C+ GK + R+ + G + +V N + +C ++
Sbjct: 346 RKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIG---- 398
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
+S A KVL M Y+ + T+ V ++ LC+ A+K++ + + + +
Sbjct: 399 ---YNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAH 455
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
+I SL + + + R + LD +Y + L +R+E A +
Sbjct: 456 FHSAIIDSLIELGKYNTAVHLFKRCILEKY--PLDVVSYTVAIKGLVRAKRIEEAYSLCC 513
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKE----YAVDPRY 273
MK G P +TY ++S L +K + E G+ + P Y++ RY
Sbjct: 514 DMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRY 572
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 8/180 (4%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G+ EA+ + + G +++Y +L + QK + ++ E++ G
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLL---AAMTVQKQ----YGSISSIVSEVEQSGT 111
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+ FN +I + EDA++ +M E G P +T+ LI+ A + E E
Sbjct: 112 KLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE 171
Query: 179 MIDRMKSAG-FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
++D M G + + + + C ++VE A +V M+ G P TY+ + +
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 17/229 (7%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P+ ++L++ WC K+EEA + +M G V YN + C ++ +
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATC---YVQKGETV 240
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
SE + +V M + P N T +++ C+ + D L+ RM E N F
Sbjct: 241 RAESEVVEKMV-MKEKAKP-NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI + + DE+ + F ++ L G ++++ ++V +M
Sbjct: 299 NSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVE----------LVGNQKMK--VQVLTLM 346
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
K + + TY +M+ + ++KA +F E G+ Y++
Sbjct: 347 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 395
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
++ W G +E+A ++ EM + G + AY+ + R K+P +AE++L
Sbjct: 361 VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG---YVRAKEP----KKAEELL 413
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ P NV F +I+ C +DA+++F++M ++G PN TF L+ +
Sbjct: 414 ETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEV 472
Query: 171 ARLEEGDEMIDRMKSAG 187
+ + +E++ M+ G
Sbjct: 473 KQPWKAEEVLQMMRGCG 489
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 91/215 (42%), Gaps = 27/215 (12%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD---- 98
P+ C +++ G+C +G++ + R M E +V +N++++ E+ +
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 99 --PFLLHSEAE------------KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKL 144
LL S E +VL M V +V T++ ++ E A ++
Sbjct: 318 TLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 377
Query: 145 FHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTIL 204
F M + G P+ + +L + +A ++ +E+++ + + F T++
Sbjct: 378 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE------SRPNVVIFTTVI 431
Query: 205 ---CGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
C ++ A++VF M G P IKT++ LM
Sbjct: 432 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 466
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 26/180 (14%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAG 69
D +L+ + K+ ++GF + A +M L++ DG+ EA L
Sbjct: 180 DPKNLQEIFHKMRTEGFTNEAVKMFDALSK------------------DGRTHEALELFS 221
Query: 70 EMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLI 129
++ VVA+ A+++ + K E KV + M GV N T++VLI
Sbjct: 222 QIKDKNRMPDVVAHTAIVEAYANAGQAK-------ETLKVFMRMLASGVSPNAYTYSVLI 274
Query: 130 TNLCKIRKT-EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
L KT +DA K M G PN T+ + + + + E E++ MK GF
Sbjct: 275 KGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGF 334
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 98/237 (41%), Gaps = 16/237 (6%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVD-GKLEEARRLAGEM 71
+ +++ KG A+R+V + +A + I C + G L R+ +
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
R NA+LD + K F + ++ K +++ ++N ++
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK-----------KDLVSWNTMLHG 390
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
L ++A++LF RM G P++ TF+ ++ S A ++EG + M+ +
Sbjct: 391 LGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV-YDLV 449
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
+ Y + +L + R++ A+KV M EP + + L+ HN VD A
Sbjct: 450 PQVEHYGCLVDLLGRVGRLKEAIKVVQTMPM---EPNVVIWGALLGACRMHNEVDIA 503
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD A + LIKG C G EA L E+ G + + +N +L K F
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILL----HESYTKGKF 228
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
E E++ M + V R++ ++N + L K+E+ + LF ++ P+ TF
Sbjct: 229 ---EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTF 285
Query: 161 VVLIRSLYQAARLEEG 176
+I+ +L+E
Sbjct: 286 TAMIKGFVSEGKLDEA 301
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 109/265 (41%), Gaps = 16/265 (6%)
Query: 2 ERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEA--MCDMLIKGWCVDG 59
ERD KR G ++ LC G A M+ +L D + M LI G
Sbjct: 490 ERDLLPKRIAGC--KIISALCDVGKVEDA-LMINELFNKSGVDTSFKMFTSLIYGSITLM 546
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ + A +L M G+ Y ++ CVCE+ + F L++
Sbjct: 547 RGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFF------TTLLKFQLSLWE 600
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
V+ +N+ I K + A ++ M G P + +++++S + ++ +
Sbjct: 601 HKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHF 660
Query: 180 IDRMKSAGFGASLDKKAYYQFLTI-LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
++ G KK YQ + + LC +++ A+ MK +G +P I+ Y++ + K
Sbjct: 661 FHDLREQG----KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQK 716
Query: 239 LGAHNRVDKANALFHEAQSRGLAVT 263
L + D+A L +E + G +T
Sbjct: 717 LCNEEKYDEAVGLVNEFRKSGRRIT 741
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
F +I + + EDA+ LF + E+ C +F L++ + + + LE I R
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACH-IFRK 141
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
G+ + A + +LC + R + A +VF M GC P +Y +LM
Sbjct: 142 YCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEG 201
Query: 244 RVDKANALFH 253
++++A L +
Sbjct: 202 KLEEATHLLY 211
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
V + N+L+ LC++ +++ A ++F M GCYP+ ++ +L++ +LEE
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 178 EMIDRM--KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
++ M + + G+ D Y L LC V+ A+++ + G + + Y
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCY 264
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
F +I + + EDA+ LF + E+ C +F L++ + + + LE I R
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACH-IFRK 141
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
G+ + A + +LC + R + A +VF M GC P +Y +LM
Sbjct: 142 YCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEG 201
Query: 244 RVDKANALFH 253
++++A L +
Sbjct: 202 KLEEATHLLY 211
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
V + N+L+ LC++ +++ A ++F M GCYP+ ++ +L++ +LEE
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 178 EMIDRM--KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
++ M + + G+ D Y L LC V+ A+++ + G + + Y
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCY 264
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 116 RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
R +++ +N +I+ E+ALK+FH M G PN+ T + ++ + A +LEE
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 450
Query: 176 GDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
G E+ + M+S F + + Y + +L +V+ A+++ M +P + L
Sbjct: 451 GLEIFESMESK-FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT---IKPDATVWGAL 506
Query: 236 MSKLGAHNRVDKA 248
+ H+R+D A
Sbjct: 507 LGACKTHSRLDLA 519
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 19/191 (9%)
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
++ ++ NA++D C+ +D + ++ ++ R+V T++ +I+ L +
Sbjct: 289 YDQDLILNNALVDMYCKCGSLEDALRVFNQMKE-----------RDVITWSTMISGLAQN 337
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
+++ALKLF RM G PN T V ++ + A LE+G MK +G ++
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL-YGIDPVRE 396
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
Y + +L +++ A+K+ M+ CEP T+ L LGA RV + L A
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEME---CEPDAVTWRTL---LGA-CRVQRNMVLAEYA 449
Query: 256 QSRGLAVTPKE 266
+ +A+ P++
Sbjct: 450 AKKVIALDPED 460
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 33/246 (13%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGF 76
++ +LC G + A ++ L D +I G+ G + EAR L R
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPE---RDVVTWTHVITGYIKLGDMREAREL---FDRVDS 105
Query: 77 ELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP-RNVETFNVLITNLCKI 135
VV + AM V R K + + EM ++ +P RNV ++N +I +
Sbjct: 106 RKNVVTWTAM---VSGYLRSK---------QLSIAEMLFQEMPERNVVSWNTMIDGYAQS 153
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
+ + AL+LF M E N ++ ++++L Q R++E + +RM D
Sbjct: 154 GRIDKALELFDEMPE----RNIVSWNSMVKALVQRGRIDEAMNLFERMPRR------DVV 203
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
++ + L +V+ A ++F M E I +++ +++ +NR+D+A+ LF
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLFQVM 259
Query: 256 QSRGLA 261
R A
Sbjct: 260 PERDFA 265
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 99/225 (44%), Gaps = 14/225 (6%)
Query: 42 FPDEA------MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCR 95
PDE+ +C+ ++ +GKL+ +L +M R G + VV YN +L C +
Sbjct: 157 IPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLL-AGCIKVK 215
Query: 96 QKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
P +A +++ E+ + G+ + + ++ ++E+A +M G P
Sbjct: 216 NGYP-----KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSP 270
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
N + L+ S ++ DE++ MKS G +K L + + + +
Sbjct: 271 NIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVP--NKVMMTTLLKVYIKGGLFDRSRE 328
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ + +++ G Y +LM L ++++A ++F + + +G+
Sbjct: 329 LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGV 373
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 59 GKL-EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
GKL +EA R+ M + G E + AY M L Q+ LL + +L EM +G
Sbjct: 506 GKLYDEAFRVWNHMIKVGIEPNLYAYTTMASV---LTGQQKFNLLDT----LLKEMASKG 558
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
+ +V TFN +I+ + + A + FHRM PNE T+ +LI +L A+
Sbjct: 559 IEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAY 618
Query: 178 EMIDRMKSAGFGASLDKKAY 197
E+ +K+ G L K Y
Sbjct: 619 EL--HVKAQNEGLKLSSKPY 636
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV------IFPDEAMCDMLIKGWCVDGKLEEARR 66
SL VVV LC G + A +V+++ V I ++M +K W EE
Sbjct: 212 SLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRW----DFEELDL 267
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFN 126
+ M + L + +Y ++D + + EAE++++ M + + +N
Sbjct: 268 VLKLMEKESVMLDLDSYKVLIDGFTSYGKVE-------EAERLVLMMHDKKLRVESYLYN 320
Query: 127 VLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSA 186
+++ + E ++L+ M G PN+ T+ VL+ L +A ++ E ++ ++
Sbjct: 321 LIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVN 380
Query: 187 GFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
F +D++ Y + ++ +L+V A M DG PG + L L NR
Sbjct: 381 EF--EIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNR 436
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 10/210 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD-CVCELCRQKDPFLL 102
+E LI+ + A R +M + G V++NA+L+ C+ K P L
Sbjct: 101 EEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLF 160
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ Y + + ++ +LI + C E A+++ +M G F
Sbjct: 161 DE------IPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTT 214
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
++ SLY+ LE D + + M G LD A Y + E E ++ M +
Sbjct: 215 ILSSLYKKGELEVADNLWNEMVKK--GCELDNAA-YNVRIMSAQKESPERVKELIEEMSS 271
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
G +P +Y+ LM+ +D+A ++
Sbjct: 272 MGLKPDTISYNYLMTAYCERGMLDEAKKVY 301
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 102 LHSEAEKVLVEMDYRGVP-RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L S ++ E+ + +P RNV ++ +IT K R+ ++A +LF RM PNE T
Sbjct: 195 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTI 254
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
V L+++ Q L G + D GF LD + + ++ A KVF +M
Sbjct: 255 VNLLQASTQLGSLSMGRWVHDYAHKNGF--VLDCFLGTALIDMYSKCGSLQDARKVFDVM 312
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
+ + T++ +++ LG H ++A +LF
Sbjct: 313 QGK----SLATWNSMITSLGVHGCGEEALSLF 340
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 14/208 (6%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD+ MLIK +C GK E+A + +M G E+ ++A+ +L + +
Sbjct: 170 ITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNG------ 223
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L EAE + +EM +G + +NV + N K E +L M G P+ ++
Sbjct: 224 -LVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK-ESPERVKELMEEMSSVGLKPDTVSY 281
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
L+ + + E ++ + ++ + + + LC + L VF
Sbjct: 282 NYLMTAYCVKGMMSEAKKVYEGLEQP------NAATFRTLIFHLCINGLYDQGLTVFKKS 335
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKA 248
P KT L L +NR++ A
Sbjct: 336 AIVHKIPDFKTCKHLTEGLVKNNRMEDA 363