Miyakogusa Predicted Gene
- Lj2g3v0636940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0636940.1 Non Chatacterized Hit- tr|I1K9M5|I1K9M5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49611
PE,23.01,4e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.35140.1
(502 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 594 e-170
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 594 e-170
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 5e-45
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 174 2e-43
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 5e-40
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 154 2e-37
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 147 2e-35
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 147 2e-35
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 1e-33
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 5e-31
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 132 7e-31
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 8e-31
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 128 9e-30
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 127 2e-29
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 6e-29
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 9e-29
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 4e-28
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 4e-28
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 5e-28
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 5e-28
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 8e-28
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 2e-27
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 3e-26
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 6e-26
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 114 1e-25
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 113 3e-25
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 7e-25
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 9e-25
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 9e-25
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 111 1e-24
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 111 1e-24
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 110 3e-24
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 107 2e-23
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 97 2e-20
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 93 4e-19
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 88 1e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 87 2e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 86 7e-17
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 71 2e-12
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 67 4e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 66 5e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 66 5e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 66 5e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 64 2e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 64 3e-10
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 7e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 61 2e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 2e-09
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 3e-09
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 4e-09
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 57 3e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 56 6e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 53 4e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 53 4e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 52 8e-07
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 52 1e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 594 bits (1531), Expect = e-170, Method: Compositional matrix adjust.
Identities = 281/484 (58%), Positives = 369/484 (76%), Gaps = 1/484 (0%)
Query: 2 TIRWPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRL 61
+RWPRVLTP+ LSQI++ QKNP+ AL +F EAK R+P Y HNG VYATMI ILG S R+
Sbjct: 3 VVRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRV 62
Query: 62 GEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTL 121
EM+ VIE+M++DSCECKD+VFAS I ++ AG +++AI+LFK++ +FNCVNW+ SF+TL
Sbjct: 63 LEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTL 122
Query: 122 LQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQG 181
LQ MV E LEAA +F GWEV SR+ ALNLLM LC RSDLA Q+FQEM+YQG
Sbjct: 123 LQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQG 182
Query: 182 CYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF 241
CYP+RDSY ILMKG C +G+L EATHLLYSMFWRISQKG+GEDIVVYR LLDALC+ G+
Sbjct: 183 CYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEV 242
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQC-SDGRDIEGTKRLIHEALIKGSVPSLSSYN 300
++AIEIL KILRKGLKAPKRCY+ ++ S IE KRL+ E LI+G++P L SY+
Sbjct: 243 DDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYS 302
Query: 301 AMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVA 360
AMA DL+ E K+ E ++V++ M+ +GF+PT I+ AKV ALC+ ++ EA+ VI ++M+
Sbjct: 303 AMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQ 362
Query: 361 VNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYL 420
+CLP VYN+L+K L + G S + L KMSK+V C A+ ETY L++ LCR+ ++L
Sbjct: 363 GHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFL 422
Query: 421 EASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLA 480
EASQ++E+M IKS++P ++Y+ +IKGLC + R+YEAVMWLE+M+SQ +PE SVWK+LA
Sbjct: 423 EASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALA 482
Query: 481 SLFC 484
C
Sbjct: 483 ESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 594 bits (1531), Expect = e-170, Method: Compositional matrix adjust.
Identities = 281/484 (58%), Positives = 369/484 (76%), Gaps = 1/484 (0%)
Query: 2 TIRWPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRL 61
+RWPRVLTP+ LSQI++ QKNP+ AL +F EAK R+P Y HNG VYATMI ILG S R+
Sbjct: 3 VVRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRV 62
Query: 62 GEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTL 121
EM+ VIE+M++DSCECKD+VFAS I ++ AG +++AI+LFK++ +FNCVNW+ SF+TL
Sbjct: 63 LEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTL 122
Query: 122 LQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQG 181
LQ MV E LEAA +F GWEV SR+ ALNLLM LC RSDLA Q+FQEM+YQG
Sbjct: 123 LQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQG 182
Query: 182 CYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF 241
CYP+RDSY ILMKG C +G+L EATHLLYSMFWRISQKG+GEDIVVYR LLDALC+ G+
Sbjct: 183 CYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEV 242
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQC-SDGRDIEGTKRLIHEALIKGSVPSLSSYN 300
++AIEIL KILRKGLKAPKRCY+ ++ S IE KRL+ E LI+G++P L SY+
Sbjct: 243 DDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYS 302
Query: 301 AMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVA 360
AMA DL+ E K+ E ++V++ M+ +GF+PT I+ AKV ALC+ ++ EA+ VI ++M+
Sbjct: 303 AMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQ 362
Query: 361 VNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYL 420
+CLP VYN+L+K L + G S + L KMSK+V C A+ ETY L++ LCR+ ++L
Sbjct: 363 GHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFL 422
Query: 421 EASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLA 480
EASQ++E+M IKS++P ++Y+ +IKGLC + R+YEAVMWLE+M+SQ +PE SVWK+LA
Sbjct: 423 EASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALA 482
Query: 481 SLFC 484
C
Sbjct: 483 ESVC 486
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 230/490 (46%), Gaps = 10/490 (2%)
Query: 9 LTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVI 68
L P +++ +I+ QK+PMKAL +FN + + H Y ++I LG G+ M +V+
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEV-GFKHTLSTYRSVIEKLGYYGKFEAMEEVL 63
Query: 69 EQMRQD-SCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVS 127
MR++ + V+ A+ Y G V EA+ +F+ + ++C S+N ++ ++V
Sbjct: 64 VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 123
Query: 128 EDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRD 187
+ AH +++ + V++ + M + C R AL++ M QGC N
Sbjct: 124 SGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 182
Query: 188 SYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEI 247
+Y ++ G + E Y +F ++ G + + LL LC+ G +E ++
Sbjct: 183 AYCTVVGGFYEENFKAEG----YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238
Query: 248 LSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLY 307
L K++++G+ YN C G +++G R++ + +G P + +YN + L
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRG-ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 308 SESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNS 367
SK EA+ + +M + G +P + +A CK V A +++ D V +P+
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG-DAVFNGFVPDQ 356
Query: 368 EVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLE 427
Y L+ L + G + L N+ K G + Y L++ L + LEA+QL
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGK-GIKPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 428 QMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLE 487
+MS K P ++N L+ GLC +G +A ++ MIS+G P+I + L +
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 488 MMKASSEIFN 497
M+ + EI +
Sbjct: 476 KMENALEILD 485
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 175/427 (40%), Gaps = 11/427 (2%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y +I L + + E + +M + E + + I Y G+V A + +
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS 167
V ++ +L+ + E A LF + + G +K V N L+ L +G
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALF-NEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVV 227
A Q+ EM +G P ++ IL+ GLC G + +A L+ M KG DI
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI----SKGYFPDIFT 463
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL--DLSQCSDGRDIEGTKRLIH 285
+ L+ K E A+EIL +L G+ YN L L + S D+ T + +
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
E KG P+L ++N + L K+DEA ++ EM+++ P F + CK
Sbjct: 524 E---KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
+D A + + A ++ YNI++ N + +M + D T
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC-LGPDGYT 639
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
Y ++++ C+ + L +M + P + +I LC R YEA + M+
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Query: 466 SQGKLPE 472
+G +PE
Sbjct: 700 QKGLVPE 706
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 129/298 (43%), Gaps = 18/298 (6%)
Query: 5 WPRVLTPTYLSQIIRTQ---KNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRL 61
+P + T L TQ +N ++ L + + YT+N ++++ L + +
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN-----SLLNGLCKTSKF 512
Query: 62 GEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTL 121
++ + + M + C F + +DEA+ L + + + +F TL
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 122 LQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQG 181
+ L+ A+ LF ++V S N++++A K +A ++FQEM +
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 182 CYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF 241
P+ +Y +++ G C G + +L Y + + G + +++ LC + +
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNV----NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRV 688
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSY 299
EA I+ ++++KGL P+ D+ D +++ K L+ E L+K S + +Y
Sbjct: 689 YEAAGIIHRMVQKGL-VPEAVNTICDV----DKKEVAAPK-LVLEDLLKKSCITYYAY 740
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 222/452 (49%), Gaps = 14/452 (3%)
Query: 1 MTIRWPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPK-YTHNGPVYATMISILGTSG 59
M +W + +TP+ + +++R +K+ K++ +F+ A + Y Y H+ + M+ L ++
Sbjct: 6 MMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSAN 65
Query: 60 RLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFN 119
+ D+I +M+ ++C + + S Y +++ +F + F+C +++
Sbjct: 66 KFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYV 125
Query: 120 TLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC-GKGRSDLALQIFQEMD 178
T+L I+V E++L A F N + V +LN+L+ ALC G D L+IF EM
Sbjct: 126 TVLAILVEENQLNLAFK-FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMP 184
Query: 179 YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCED 238
+GC P+ +Y L+ GLC GR+ EA L F + +K +V Y +L++ LC
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKL----FTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 239 GKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSS 298
+EA+ L ++ KG++ Y+ L C DGR ++ + L + +G P++ +
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME-LFEMMMARGCRPNMVT 299
Query: 299 YNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDM 358
Y + L E KI EA +++ M +G KP ++ ++ C +S+ EA ++E M
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE-M 358
Query: 359 VAVNCLPNSEVYNILLKNLRNV-----GNSAAVLESLNKMSKKVGCTADRETYIILLEML 413
+ PN +NI +K V N + +L + G + + ET L++ L
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCL 418
Query: 414 CRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
C++ + +A QL++++ P ++ LI
Sbjct: 419 CKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 181/415 (43%), Gaps = 68/415 (16%)
Query: 67 VIEQMR-QDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIM 125
VI+ MR + E VF SA YAN + D++ SF ++ +
Sbjct: 19 VIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQS-----------------SFGYMVLRL 61
Query: 126 VSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDL---ALQIFQEMDYQGC 182
VS ++ +AA L V ++++ V + ++L+ G GR +L++F +M C
Sbjct: 62 VSANKFKAAEDLIVR----MKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDC 117
Query: 183 YPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE-DGKF 241
P++ +Y ++ L + +L+ L + + + + G + L+ ALC DG
Sbjct: 118 DPSQKAYVTVLAILVEENQLN----LAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTV 173
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNA 301
+ ++I L+ PKR G P +Y
Sbjct: 174 DAGLKIF-------LEMPKR-----------------------------GCDPDSYTYGT 197
Query: 302 MAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAV 361
+ L +IDEA K+ EM ++ PT + + + LC VDEA++ +EE M +
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEE-MKSK 256
Query: 362 NCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLE 421
PN Y+ L+ L G S +E M + GC + TY L+ LC+E++ E
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR-GCRPNMVTYTTLITGLCKEQKIQE 315
Query: 422 ASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVW 476
A +LL++M+++ P A Y +I G C++ + EA +L++MI G P W
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 3/210 (1%)
Query: 291 GSVPSLSSYNAMAVDL-YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDE 349
G P+++S N + L ++ +D K+ +EM RG P + ++ LC+ R+DE
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 350 AIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIIL 409
A K+ E MV +C P Y L+ L N + L +M K G + TY L
Sbjct: 211 AKKLFTE-MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK-GIEPNVFTYSSL 268
Query: 410 LEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGK 469
++ LC++ R L+A +L E M + P +Y +LI GLC + EAV L+ M QG
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328
Query: 470 LPEISVWKSLASLFCNLEMMKASSEIFNRL 499
P+ ++ + S FC + + ++ + +
Sbjct: 329 KPDAGLYGKVISGFCAISKFREAANFLDEM 358
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
R+ H+ PS +Y + L E++++ A K M++ G PT A + AL
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL 166
Query: 342 CKV-SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
C+ VD +K+ E M C P+S Y L+ L G + +M +K C
Sbjct: 167 CRNDGTVDAGLKIFLE-MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK-DCA 224
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
TY L+ LC + EA + LE+M K P +Y+SL+ GLC GR +A+
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 461 LEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
E M+++G P + + +L + C + ++ + E+ +R+
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 6/215 (2%)
Query: 275 RDIEGTKRLIHEALIK---GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTR 331
+D+E + + A + G V SS+ M + L S +K A+ +IV M+ +
Sbjct: 27 KDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSE 86
Query: 332 AIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLN 391
I + +V R ++++V + M +C P+ + Y +L L N +
Sbjct: 87 DILLSICRGYGRVHRPFDSLRVFHK-MKDFDCDPSQKAYVTVLAILVE-ENQLNLAFKFY 144
Query: 392 KMSKKVGCTADRETYIILLEMLCRERRYLEAS-QLLEQMSIKSYWPCADSYNSLIKGLCS 450
K +++G + +L++ LCR ++A ++ +M + P + +Y +LI GLC
Sbjct: 145 KNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCR 204
Query: 451 LGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCN 485
GR EA +M+ + P + + SL + C
Sbjct: 205 FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 239/520 (45%), Gaps = 44/520 (8%)
Query: 18 IRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCE 77
+R+Q + AL +FN A S+ P ++ +Y ++ LG SG +M+ ++E M+ CE
Sbjct: 57 LRSQPDDSAALRLFNLA-SKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCE 115
Query: 78 CKDTVFASAINIYANAGLVDEAITLFK-NIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHG 136
+ F I YA L DE +++ I +F T +N +L ++V + L+
Sbjct: 116 MGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEI 175
Query: 137 LFVDNSCGWEVKSRVHALNLLMYALC---------------------------------- 162
S W +K V N+L+ ALC
Sbjct: 176 SHAKMSV-WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 163 -GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
+G D AL+I ++M GC + S +++ G C +GR+ +A + + M +Q G
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM---SNQDGF 291
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
D + TL++ LC+ G + AIEI+ +L++G YN + C G +++
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG-EVKEAV 350
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
++ + + + P+ +YN + L E++++EA ++ + +G P F + + L
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
C A+++ EE M + C P+ YN+L+ +L + G L L +M GC
Sbjct: 411 CLTRNHRVAMELFEE-MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCAR 468
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
TY L++ C+ + EA ++ ++M + + +YN+LI GLC R +A +
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 462 EDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
+ MI +G+ P+ + SL + FC +K +++I + S
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 206/424 (48%), Gaps = 15/424 (3%)
Query: 81 TVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL--- 137
+ F I A + AI + +++P + V ++F T++Q + E L+ A +
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 138 FVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQ-GCYPNRDSYAILMKGL 196
V+ C W S +N++++ C +GR + AL QEM Q G +P++ ++ L+ GL
Sbjct: 250 MVEFGCSWSNVS----VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 197 CHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
C G + A ++ M Q+G D+ Y +++ LC+ G+ +EA+E+L +++ +
Sbjct: 306 CKAGHVKHAIEIMDVML----QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 257 KAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEAD 316
YN L + C + + +E L KG +P + ++N++ L A
Sbjct: 362 SPNTVTYNTLISTLCKENQ-VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 317 KVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKN 376
++ EM+ +G +P + + +LC ++DEA+ ++++ M C + YN L+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ-MELSGCARSVITYNTLIDG 479
Query: 377 LRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWP 436
+ E ++M G + + TY L++ LC+ RR +A+QL++QM ++ P
Sbjct: 480 FCKANKTREAEEIFDEMEVH-GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 437 CADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIF 496
+YNSL+ C G +A ++ M S G P+I + +L S C ++ +S++
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 497 NRLR 500
++
Sbjct: 599 RSIQ 602
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 214/479 (44%), Gaps = 58/479 (12%)
Query: 27 ALHIFNEAKSR---YP-KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTV 82
AL+ E ++ +P +YT N T+++ L +G + ++++ M Q+ +
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFN-----TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 83 FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF-VDN 141
+ S I+ G V EA+ + + +C T ++NTL+ + E+++E A L V
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
S G + V N L+ LC +A+++F+EM +GC P+ +Y +L+ LC G+
Sbjct: 393 SKG--ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
L EA ++L M G ++ Y TL+D C+ K EA EI ++ G+
Sbjct: 451 LDEALNMLKQM----ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
YN L C R +E +L+ + +++G P +YN++ I +A ++
Sbjct: 507 TYNTLIDGLCK-SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE-DMVAVNCLPNSEVYNILLKNLRNV 380
M G +P + ++ LCK RV+ A K++ M +N P++ YN +++ L
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGL--- 620
Query: 381 GNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPC-AD 439
R+R+ EA L +M ++ P A
Sbjct: 621 ---------------------------------FRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 440 SYNSLIKGLCSLGRQY-EAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFN 497
SY + +GLC+ G EAV +L +++ +G +PE S LA L M + ++ N
Sbjct: 648 SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVN 706
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 195/426 (45%), Gaps = 11/426 (2%)
Query: 62 GEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQ-SFNT 120
G +R + EQM + C + ++ + G V++A+ + + + Q +FNT
Sbjct: 242 GALR-IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 121 LLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQ 180
L+ + ++ A + +D V+ N ++ LC G A+++ +M +
Sbjct: 301 LVNGLCKAGHVKHAIEI-MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 181 GCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGK 240
C PN +Y L+ LC + ++ EAT L + + KG D+ + +L+ LC
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVL----TSKGILPDVCTFNSLIQGLCLTRN 415
Query: 241 FEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYN 300
A+E+ ++ KG + + YN L S CS G+ ++ ++ + + G S+ +YN
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK-LDEALNMLKQMELSGCARSVITYN 474
Query: 301 AMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVA 360
+ +K EA+++ EM+ G + + LCK RV++A +++++ M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ-MIM 533
Query: 361 VNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYL 420
P+ YN LL + G+ + + M+ GC D TY L+ LC+ R
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVE 592
Query: 421 EASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISV-WKSL 479
AS+LL + +K +YN +I+GL + EA+ +M+ Q + P +V ++ +
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 480 ASLFCN 485
CN
Sbjct: 653 FRGLCN 658
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 208/448 (46%), Gaps = 19/448 (4%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
ALH F ++ + + H + MI L G++ ++ +++QM+ C + +F S
Sbjct: 59 ALHFF-KSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 117
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGW 145
I++Y GL + A+ +F I +F C + +N +L ++ E+R++ + ++ D G+
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGF 177
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
E V N+L+ ALC + D A ++ EM +GC P+ SY ++ +C G + E
Sbjct: 178 E--PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 206 THLLYSMFWRISQKGNGEDIV-VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN 264
L E +V VY L++ LC++ ++ A E++ +++ KG+ Y+
Sbjct: 236 RELAERF----------EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 265 RLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM-Q 323
L C+ G+ IE + + L +G P++ + +++ + +A + +M +
Sbjct: 286 TLINVLCNSGQ-IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
G +P + V C + +A+ V M + C PN Y L+ G+
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH-MEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 384 AAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS 443
+ NKM GC + Y ++E LCR ++ EA L+E MS ++ P ++N+
Sbjct: 404 DGAVYIWNKMLTS-GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Query: 444 LIKGLCSLGRQYEAVMWLEDMISQGKLP 471
IKGLC GR A M Q + P
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 200/493 (40%), Gaps = 50/493 (10%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTV-FASAINIYANAGLVDEA 99
+ N Y ++ L + ++ + ++ +M C C D V + + I+ GLV E
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGC-CPDAVSYTTVISSMCEVGLVKEG 235
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
L + V +N L+ + E + A L + + V + + L+
Sbjct: 236 RELAERFEPVVSV-----YNALINGLCKEHDYKGAFELMRE-MVEKGISPNVISYSTLIN 289
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
LC G+ +LA +M +GC+PN + + L+KG G +A L M I
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM---IRGF 346
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
G ++V Y TL+ C G +A+ + S + G R Y L ++ + ++G
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL-INGFAKRGSLDG 405
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
+ ++ L G P++ Y M L SK EA+ +I M P+ F A +
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPN--------------------------------- 366
LC R+D A KV + C PN
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 367 --SEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
S YN LL N G L+ + KM G + D T +++ C++ + A+Q
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD-GKSPDEITMNMIILAYCKQGKAERAAQ 584
Query: 425 LLEQMSI--KSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASL 482
+L+ +S + + P SY ++I GLC + + V+ LE MIS G +P I+ W L +
Sbjct: 585 MLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINC 644
Query: 483 FCNLEMMKASSEI 495
F ++++A +
Sbjct: 645 FILDDIVRAHDQF 657
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 149/349 (42%), Gaps = 15/349 (4%)
Query: 153 ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
+++ L G+ D + Q+M QG + + D + ++ G A M
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVE----M 133
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS 272
F+RI + G + +Y +LD L + + + + + R G + YN L + C
Sbjct: 134 FYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 273 DGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRA 332
+ + ++G K+L+ E KG P SY + + + E E+ +R F+P +
Sbjct: 194 NNK-VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR----ELAER-FEPVVS 247
Query: 333 IFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNK 392
++ A + LCK A +++ E MV PN Y+ L+ L N G L +
Sbjct: 248 VYNALINGLCKEHDYKGAFELMRE-MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 393 MSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYW--PCADSYNSLIKGLCS 450
M K+ GC + T L++ +A L QM I+ + P +YN+L++G CS
Sbjct: 307 MLKR-GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM-IRGFGLQPNVVAYNTLVQGFCS 364
Query: 451 LGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
G +AV M G P I + SL + F + + I+N++
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 220/499 (44%), Gaps = 79/499 (15%)
Query: 5 WPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEM 64
WP+ L P L +I Q+N AL IF A +P +THN Y +++ L + +
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPV 102
Query: 65 RDVIEQMRQD--SCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLL 122
++ +R +C + +F + Y AG + ++ +F IP F +S NTLL
Sbjct: 103 ESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLL 162
Query: 123 QIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGK------------------ 164
+++ R + H +F ++ + + + NLL+ ALC K
Sbjct: 163 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 222
Query: 165 ---------------GRSDL--ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATH 207
R D+ A ++ +EM +G YP+ +Y +LM G C GR EA
Sbjct: 223 VPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAAT 282
Query: 208 LL--------------YSMFWRI--SQKGNGE-----DIVVYRTLL----------DALC 236
++ Y + R +K +GE D ++ R+ + DALC
Sbjct: 283 VMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALC 342
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSL 296
ED K +EA + K+L+ + L C +GR E K + + KGS+PSL
Sbjct: 343 EDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK--LFDEFEKGSIPSL 400
Query: 297 SSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+YN + + + ++ EA ++ +M +R KP + + L K V E ++V+EE
Sbjct: 401 LTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEE 460
Query: 357 DMVAVNCLPNSEVYNILLKNLRNVGN--SAAVLESLNKMSKKVGCTADRETYIILLEMLC 414
M+ + C PN + IL + L+ +G A + S+ M+ KV D+E++ + L+
Sbjct: 461 -MLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV----DKESWELFLKKFA 515
Query: 415 RE--RRYLEASQLLEQMSI 431
E + L +LL ++S+
Sbjct: 516 GELDKGVLPLKELLHEISV 534
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 143/340 (42%), Gaps = 18/340 (5%)
Query: 168 DLALQIF--QEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
DLALQIF + G N D+Y ++ L L+ + GE++
Sbjct: 63 DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENL 122
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
+ LL G++E ++ I +I G+K R N L L+ + + L+H
Sbjct: 123 FI--DLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTL-LNVLIQNQRFD----LVH 175
Query: 286 EALIK------GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
A+ K G P++ + N + L ++ I+ A KV+ E+ G P + +
Sbjct: 176 -AMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILG 234
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
++ A +V+EE M+ P++ Y +L+ +G + ++ M K
Sbjct: 235 GYVARGDMESAKRVLEE-MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKN-EI 292
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVM 459
+ TY +++ LC+E++ EA + ++M +S+ P + +I LC + EA
Sbjct: 293 EPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACG 352
Query: 460 WLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
M+ +P+ ++ +L C + + ++F+
Sbjct: 353 LWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 222/495 (44%), Gaps = 19/495 (3%)
Query: 9 LTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVI 68
+TP L +++ N ++ +F+ S+ Y H+ VY +I LG +G + ++
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQ-NGYRHSFDVYQVLIGKLGANGEFKTIDRLL 134
Query: 69 EQMRQDSCECKDTVFASAINIYANAGLVDEAITLF---KNIPQFNCVNWTQSFNTLLQIM 125
QM+ + K+++F S + Y AG + L +N+ ++C +S+N +L+I+
Sbjct: 135 IQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNV--YSCEPTFKSYNVVLEIL 192
Query: 126 VSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN 185
VS + + A +F D ++ + ++M A C D AL + ++M GC PN
Sbjct: 193 VSGNCHKVAANVFYD-MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN 251
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAI 245
Y L+ L R++EA LL MF G D + ++ LC+ + EA
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFL----MGCVPDAETFNDVILGLCKFDRINEAA 307
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVD 305
++++++L +G Y L C GR ++ K L + P + +N +
Sbjct: 308 KMVNRMLIRGFAPDDITYGYLMNGLCKIGR-VDAAKDLFYRI----PKPEIVIFNTLIHG 362
Query: 306 LYSESKIDEADKVIVEM-QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
+ ++D+A V+ +M G P + + + K V A++V+ DM C
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL-HDMRNKGCK 421
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
PN Y IL+ +G LN+MS G + + L+ C+E R EA +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
+ +M K P ++NSLI GLC + A+ L DMIS+G + + +L + F
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 485 NLEMMKASSEIFNRL 499
+K + ++ N +
Sbjct: 541 RRGEIKEARKLVNEM 555
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 194/420 (46%), Gaps = 11/420 (2%)
Query: 60 RLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFN 119
R+ E ++ +M D + +N G VD A LF IP+ V FN
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV----IFN 357
Query: 120 TLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDY 179
TL+ V+ RL+ A + D + + V N L+Y +G LAL++ +M
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 180 QGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDG 239
+GC PN SY IL+ G C G++ EA ++L M S G + V + L+ A C++
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM----SADGLKPNTVGFNCLISAFCKEH 473
Query: 240 KFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSY 299
+ EA+EI ++ RKG K +N L +S + +I+ L+ + + +G V + +Y
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSL-ISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 300 NAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMV 359
N + +I EA K++ EM +G + + + LC+ VD+A + E+ M+
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK-ML 591
Query: 360 AVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRY 419
P++ NIL+ L G +E +M + G T D T+ L+ LCR R
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR-GSTPDIVTFNSLINGLCRAGRI 650
Query: 420 LEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
+ + ++ + P ++N+L+ LC G Y+A + L++ I G +P W L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 224/492 (45%), Gaps = 47/492 (9%)
Query: 49 ATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF-KNIP 107
++MI SG + ++ ++R ++ + F Y A L D+A+ LF + +
Sbjct: 81 SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140
Query: 108 QFNCVNWTQSFNTLLQIMVSED---RLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGK 164
+F C +SFN++L ++++E R + V+++ + + NL++ ALC
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
D A+++F+ M + C P+ +Y LM GLC + R+ EA LL M +G
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM----QSEGCSPS 256
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR---DIEGTK 281
V+Y L+D LC+ G +++ + KG + YN L C G+ + +
Sbjct: 257 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 282 RLI----------HEALIKG---------SVPSLSS------------YNAMAVDLYSES 310
R++ + LI G +V LSS Y+ + L+ E
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG 376
Query: 311 KIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVY 370
K +EA + +M ++G KP ++ V LC+ + +EA +++ M+A CLPN+ Y
Sbjct: 377 KAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR-MIASGCLPNAYTY 435
Query: 371 NILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMS 430
+ L+K G ++ +M K GC+ ++ Y +L++ LC R EA + +M
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDK-TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML 494
Query: 431 IKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGK---LPEISVWKSLASLFCNLE 487
P +Y+S+IKGLC +G A+ +M+ Q + P++ + L C +
Sbjct: 495 TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK 554
Query: 488 MMKASSEIFNRL 499
+ + ++ N +
Sbjct: 555 DISRAVDLLNSM 566
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/490 (23%), Positives = 203/490 (41%), Gaps = 67/490 (13%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
+A+ +F R K +G Y T++ L R+ E ++++M+ + C ++
Sbjct: 205 RAIEVFRGMPER--KCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 86 AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGW 145
I+ G + L N+ CV ++NTL+ HG
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI------------HG--------- 301
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
LC KG+ D A+ + + M C PN +Y L+ GL R +A
Sbjct: 302 ---------------LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR 265
LL SM ++G + +Y L+ L ++GK EEA+ + K+ KG K Y+
Sbjct: 347 VRLLSSM----EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSV 402
Query: 266 LDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDR 325
L C +G+ E K +++ + G +P+ +Y+++ + +EA +V EM
Sbjct: 403 LVDGLCREGKPNEA-KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKT 461
Query: 326 GFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAA 385
G + + + LC V RV EA+ V + M+ + P++ Y+ ++K L +G+ A
Sbjct: 462 GCSRNKFCYSVLIDGLCGVGRVKEAMMVWSK-MLTIGIKPDTVAYSSIIKGLCGIGSMDA 520
Query: 386 VLESLNKM--SKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS 443
L+ ++M ++ D TY ILL+ LC ++ A LL M + P + N+
Sbjct: 521 ALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNT 580
Query: 444 LIKGL------CSLGRQY---------------EAVMWLEDMISQGKLPEISVWKSLASL 482
+ L C GR + A +E M+ + P+ S W +
Sbjct: 581 FLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVRE 640
Query: 483 FCNLEMMKAS 492
C + + A+
Sbjct: 641 ICKPKKINAA 650
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 216/505 (42%), Gaps = 29/505 (5%)
Query: 7 RVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRD 66
+ ++ T + Q +R K P L F+ ++ ++H + M+ LG + L R+
Sbjct: 64 QTISRTTVLQTLRLIKVPADGLRFFDWVSNK--GFSHKEQSFFLMLEFLGRARNLNVARN 121
Query: 67 VIEQMRQDSCEC---KDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQ 123
+ + + S C +D F S I Y NAGL E++ LF+ + Q +FN+LL
Sbjct: 122 FLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLS 181
Query: 124 IMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCY 183
I++ R AH LF + + V + N L+ C D A +IF++M+ C
Sbjct: 182 ILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCN 241
Query: 184 PNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEE 243
P+ +Y ++ GLC G++ A ++L M + + ++V Y TL+ C + +E
Sbjct: 242 PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDV--HPNVVSYTTLVRGYCMKQEIDE 299
Query: 244 AIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGS------VPSLS 297
A+ + +L +GLK YN L R E I + LI G+ P
Sbjct: 300 AVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDE-----IKDILIGGNDAFTTFAPDAC 354
Query: 298 SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE- 356
++N + +D A KV EM + P A + + LC + D A + E
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 357 -----DMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLE 411
+ C P + YN + + L G + + ++ K+ D +Y L+
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKR--GVQDPPSYKTLIT 472
Query: 412 MLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLP 471
CRE ++ A +LL M + + P ++Y LI GL +G A L+ M+ LP
Sbjct: 473 GHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLP 532
Query: 472 EISVWKSLASLFCNLEMMKASSEIF 496
V + S+ L K ++E F
Sbjct: 533 ---VATTFHSVLAELAKRKFANESF 554
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 187/437 (42%), Gaps = 19/437 (4%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTV--FASAINIYANAGLVDEAITLFK 104
Y T+I L +G++ +V+ M + + + V + + + Y +DEA+ +F
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 105 NIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLMYALCG 163
++ ++NTL++ + R + + + N N+L+ A C
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCD 365
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
G D A+++FQEM +P+ SY++L++ LC A L +F + G E
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDE 425
Query: 224 ---DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
Y + + LC +GK ++A ++ +++++G++ P Y L C +G+ +
Sbjct: 426 CKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP-SYKTLITGHCREGK-FKPA 483
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
L+ L + VP L +Y + L + A + M + P F + +A
Sbjct: 484 YELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAE 543
Query: 341 LCKVSRVDEA---IKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKV 397
L K +E+ + ++ E + N +++V +L + + A L + ++
Sbjct: 544 LAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQK---EKAFL--IVRLLYDN 598
Query: 398 GCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEA 457
G E LL LC R+ L+A L+ KS D+ N++I+GLC R EA
Sbjct: 599 GYLVKMEE---LLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEA 655
Query: 458 VMWLEDMISQGKLPEIS 474
+++ G ++S
Sbjct: 656 FSLYNELVELGNHQQLS 672
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 195/446 (43%), Gaps = 44/446 (9%)
Query: 70 QMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSED 129
Q D C +VF + Y+ L+D+A+++ + S+N +L +
Sbjct: 124 QETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSK 183
Query: 130 R-LEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN--- 185
R + A +F + +V V N+L+ C G D+AL +F +M+ +GC PN
Sbjct: 184 RNISFAENVFKE-MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 186 ---------------------RD-----------SYAILMKGLCHDGRLHEATHLLYSMF 213
R SY +++ GLC +GR+ E + +L M
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM- 301
Query: 214 WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSD 273
+++G D V Y TL+ C++G F +A+ + +++LR GL Y L S C
Sbjct: 302 ---NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 274 GRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAI 333
G ++ + + ++G P+ +Y + + ++EA +V+ EM D GF P+
Sbjct: 359 G-NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 334 FEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKM 393
+ A + C ++++AI V+ EDM P+ Y+ +L + L +M
Sbjct: 418 YNALINGHCVTGKMEDAIAVL-EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 394 SKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGR 453
+K G D TY L++ C +RR EA L E+M P +Y +LI C G
Sbjct: 477 VEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 454 QYEAVMWLEDMISQGKLPEISVWKSL 479
+A+ +M+ +G LP++ + L
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVL 561
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 161/360 (44%), Gaps = 21/360 (5%)
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
L++++C G + A++ +M +G PN +Y L+ G G ++EA Y + +
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA----YRVLREM 406
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
+ G +V Y L++ C GK E+AI +L + KGL Y+ + LS D
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV-LSGFCRSYD 465
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
++ R+ E + KG P +Y+++ + + EA + EM G P + A
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
+ A C +++A++ + +MV LP+ Y++L+ L + L K+ +
Sbjct: 526 LINAYCMEGDLEKALQ-LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 397 VGCTAD--------------RETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYN 442
+D ++ + L++ C + EA Q+ E M K++ P +YN
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644
Query: 443 SLIKGLCSLGRQYEAVMWLEDMISQG-KLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
+I G C G +A ++M+ G L ++V + +L ++ + +S I + LRS
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRS 704
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 17/244 (6%)
Query: 261 RCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNA-MAVDLYSESKIDEADKVI 319
+ Y+RL L I+ ++H A G +P + SYNA + + S+ I A+ V
Sbjct: 142 KSYSRLSL--------IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 320 VEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKN--- 376
EM + P + + C +D A+ + ++ M CLPN YN L+
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK-METKGCLPNVVTYNTLIDGYCK 252
Query: 377 LRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWP 436
LR + + +L S M+ K G + +Y +++ LCRE R E S +L +M+ + Y
Sbjct: 253 LRKIDDGFKLLRS---MALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 437 CADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIF 496
+YN+LIKG C G ++A++ +M+ G P + + SL C M + E
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 497 NRLR 500
+++R
Sbjct: 369 DQMR 372
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 131/311 (42%), Gaps = 26/311 (8%)
Query: 32 NEAKSRYPKYTHNG--PVYATMISILGTSGRLGEMRD---VIEQMRQDSCECKDTVFASA 86
NEA + NG P T +++ G+M D V+E M++ +++
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWE 146
++ + + VDEA+ + + + + T ++++L+Q + R + A L+ +
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY-EEMLRVG 515
Query: 147 VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEAT 206
+ L+ A C +G + ALQ+ EM +G P+ +Y++L+ GL R EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 207 HLLYSMFWRISQKGNGEDIVVYRTLLD---------------ALCEDGKFEEAIEILSKI 251
LL +F+ S + V Y TL++ C G EA ++ +
Sbjct: 576 RLLLKLFYEESVPSD----VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 252 LRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK 311
L K K YN + C G DI L E + G + + A+ L+ E K
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAG-DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 312 IDEADKVIVEM 322
++E + VIV +
Sbjct: 691 VNELNSVIVHV 701
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 168/347 (48%), Gaps = 8/347 (2%)
Query: 10 TPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIE 69
+PT + ++I +Q +P+ A IF+ A S+ P + H+ + +I LG + DV+
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYA-SQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLA 108
Query: 70 QMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSE- 128
+ R +F I +YA A L ++ ++ F + +FN + N +L ++VS
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 129 DRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDS 188
L+ A LF +S V + NLLM A C +A Q+F +M + P+ DS
Sbjct: 169 GYLQKAFELF-KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 189 YAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEIL 248
Y IL++G C G+++ A LL M KG D + Y TLL++LC + EA ++L
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDML----NKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Query: 249 SKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYS 308
++ KG YN + L C + R ++ ++++ + L G P+ SY + L
Sbjct: 284 CRMKLKGCNPDLVHYNTMILGFCREDRAMDA-RKVLDDMLSNGCSPNSVSYRTLIGGLCD 342
Query: 309 ESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
+ DE K + EM +GF P ++ V C +V+EA V+E
Sbjct: 343 QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVE 389
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 4/256 (1%)
Query: 231 LLDALCED-GKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALI 289
+LD L G ++A E+ G+ R YN L + C + D+ +L + L
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND-DLSIAYQLFGKMLE 218
Query: 290 KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDE 349
+ VP + SY + + +++ A +++ +M ++GF P R + + +LC+ +++ E
Sbjct: 219 RDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLRE 278
Query: 350 AIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIIL 409
A K++ M C P+ YN ++ + + L+ M GC+ + +Y L
Sbjct: 279 AYKLLCR-MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSN-GCSPNSVSYRTL 336
Query: 410 LEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGK 469
+ LC + + E + LE+M K + P N L+KG CS G+ EA +E ++ G+
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 470 LPEISVWKSLASLFCN 485
W+ + L CN
Sbjct: 397 TLHSDTWEMVIPLICN 412
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 13/331 (3%)
Query: 169 LALQIFQEMDYQGCYPN----RDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
LA +IF DY PN R S+ IL+ L GR +L+ + + G
Sbjct: 66 LAKEIF---DYASQQPNFRHSRSSHLILILKLGR-GRYF---NLIDDVLAKHRSSGYPLT 118
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
++ L+ E E+ + K+L + NR+ S ++ L
Sbjct: 119 GEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELF 178
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
+ + G +P+ SYN + + A ++ +M +R P ++ + C+
Sbjct: 179 KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRK 238
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
+V+ A+++++ DM+ +P+ Y LL +L + L +M K GC D
Sbjct: 239 GQVNGAMELLD-DMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLK-GCNPDLV 296
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
Y ++ CRE R ++A ++L+ M P + SY +LI GLC G E +LE+M
Sbjct: 297 HYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Query: 465 ISQGKLPEISVWKSLASLFCNLEMMKASSEI 495
IS+G P SV L FC+ ++ + ++
Sbjct: 357 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDV 387
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 1/185 (0%)
Query: 316 DKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLK 375
D V+ + + G+ T IF + + +++ E + M+ N P + N +L
Sbjct: 104 DDVLAKHRSSGYPLTGEIFTYLIKVYAE-AKLPEKVLSTFYKMLEFNFTPQPKHLNRILD 162
Query: 376 NLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYW 435
L + L K S+ G + +Y +L++ C A QL +M +
Sbjct: 163 VLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV 222
Query: 436 PCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEI 495
P DSY LI+G C G+ A+ L+DM+++G +P+ + +L + C ++ + ++
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 496 FNRLR 500
R++
Sbjct: 283 LCRMK 287
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 209/492 (42%), Gaps = 50/492 (10%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y M++ G + E + ++ + + + S I Y +D A +F +
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFV---DNSCGWEVKSRVHALNLLMYALCG 163
P C ++ L+ + R++ A LFV D+ C V++ +L+ +LCG
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT----YTVLIKSLCG 335
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
R AL + +EM+ G PN +Y +L+ LC + +A LL M +KG
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML----EKGLMP 391
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS----------- 272
+++ Y L++ C+ G E+A++++ + + L R YN L C
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLN 451
Query: 273 ------------------DGR----DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSES 310
DG+ + + RL+ +G VP +Y +M L
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 311 KIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVY 370
+++EA + ++ +G P ++ A + CK +VDEA ++ E M++ NCLPNS +
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA-HLMLEKMLSKNCLPNSLTF 570
Query: 371 NILLKNLRNVGN--SAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQ 428
N L+ L G A +LE KM K +G T IL+ L ++ + A +Q
Sbjct: 571 NALIHGLCADGKLKEATLLEE--KMVK-IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 429 MSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEM 488
M P A +Y + I+ C GR +A + M G P++ + SL + +L
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 489 MKASSEIFNRLR 500
+ ++ R+R
Sbjct: 688 TNFAFDVLKRMR 699
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 225/501 (44%), Gaps = 35/501 (6%)
Query: 9 LTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLG---EMR 65
++P+++S + +P AL+ F+ S+ P+Y H+ YA+++++L +G +G ++R
Sbjct: 88 ISPSHVSSLFSLDLDPKTALN-FSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIR 146
Query: 66 -----------------DVIEQMRQDS-CECKDTV----FASAINIYANAGLVDEAITLF 103
D+ +M +D E K + + + +N A GLVDE ++
Sbjct: 147 LLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCG 163
+ + ++N ++ +E A+ +V + L+ C
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ-YVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
+ D A ++F EM +GC N +Y L+ GLC R+ EA L F ++
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL----FVKMKDDECFP 321
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
+ Y L+ +LC + EA+ ++ ++ G+K Y L S CS + E + L
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK-FEKAREL 380
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCK 343
+ + L KG +P++ +YNA+ I++A V+ M+ R P + + CK
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 344 VSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADR 403
S V +A+ V+ + M+ LP+ YN L+ GN + L+ M+ + G D+
Sbjct: 441 -SNVHKAMGVLNK-MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR-GLVPDQ 497
Query: 404 ETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLED 463
TY +++ LC+ +R EA L + + K P Y +LI G C G+ EA + LE
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 464 MISQGKLPEISVWKSLASLFC 484
M+S+ LP + +L C
Sbjct: 558 MLSKNCLPNSLTFNALIHGLC 578
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 183/433 (42%), Gaps = 23/433 (5%)
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN 141
+ S I+ +G D A L + V ++ +++ + R+E A LF D+
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF-DS 522
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
V V L+ C G+ D A + ++M + C PN ++ L+ GLC DG+
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
L EAT L M Q D ++ LL +DG F+ A ++L G K
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLL----KDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
Y + C +GR ++ + ++ + G P L +Y+++ + + A V+
Sbjct: 639 TYTTFIQTYCREGRLLDA-EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 322 MQDRGFKPTRAIF---------------EAKVAALCKVSRVDEAIKVIE--EDMVAVNCL 364
M+D G +P++ F + LC +S + E V+E E MV +
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
PN++ Y L+ + VGN + + M + G + + LL C+ +++ EA++
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
+++ M + P +S LI GL G + ++++ G + WK +
Sbjct: 818 VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVG 877
Query: 485 NLEMMKASSEIFN 497
+++A E+FN
Sbjct: 878 KQGLVEAFYELFN 890
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 157/353 (44%), Gaps = 24/353 (6%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y +MI L S R+ E D+ + + Q ++ + I+ Y AG VDEA + + +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
NC+ + +FN L+ + ++ +L+ A L + ++ V +L++ L G
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
D A FQ+M G P+ +Y ++ C +GRL +A M ++ + G D+
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE----DMMAKMRENGVSPDLF 673
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL-----------------DLS 269
Y +L+ + G+ A ++L ++ G + + + L +L
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 270 QCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ-DRGFK 328
S+ + + L+ + + P+ SY + + + + A+KV MQ + G
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 329 PTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
P+ +F A ++ CK+ + +EA KV+ +DM+ V LP E +L+ L G
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVV-DDMICVGHLPQLESCKVLICGLYKKG 845
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 3/267 (1%)
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
I Y TLL++L G +E ++ ++L + YN++ C G ++E + +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLG-NVEEANQYV 241
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
+ + G P +Y ++ + +D A KV EM +G + + + LC
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
R+DEA+ + + M C P Y +L+K+L + L + +M ++ G +
Sbjct: 302 RRIDEAMDLFVK-MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-EETGIKPNIH 359
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
TY +L++ LC + ++ +A +LL QM K P +YN+LI G C G +AV +E M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 465 ISQGKLPEISVWKSLASLFCNLEMMKA 491
S+ P + L +C + KA
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHKA 446
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 3/240 (1%)
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
CYN L L+ + ++ K++ E L P++ +YN M ++EA++ + +
Sbjct: 185 CYNTL-LNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
+ + G P + + + C+ +D A KV E M C N Y L+ L
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE-MPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
++ KM K C TY +L++ LC R EA L+++M P +Y
Sbjct: 303 RIDEAMDLFVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 442 NSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
LI LCS + +A L M+ +G +P + + +L + +C M++ + ++ + S
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 167/338 (49%), Gaps = 7/338 (2%)
Query: 147 VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEAT 206
V V N ++ +LC G+ A+++ M + CYP+ +Y IL++ C D + A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 207 HLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL 266
LL M +G D+V Y L++ +C++G+ +EAI+ L+ + G + +N +
Sbjct: 260 KLLDEM----RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 267 DLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRG 326
S CS GR ++ K L+ + L KG PS+ ++N + L + + A ++ +M G
Sbjct: 316 LRSMCSTGRWMDAEK-LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 327 FKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAV 386
+P + + CK ++D AI+ +E MV+ C P+ YN +L L G
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLER-MVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 387 LESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIK 446
+E LN++S K GC+ TY +++ L + + +A +LL++M K P +Y+SL+
Sbjct: 434 VEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 447 GLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
GL G+ EA+ + + G P + S+ C
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 175/383 (45%), Gaps = 46/383 (12%)
Query: 119 NTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMD 178
N L+ MV LE F++N + L+ C G++ A +I + ++
Sbjct: 106 NNHLRQMVRTGELEEGFK-FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILE 164
Query: 179 YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCED 238
G P+ +Y +++ G C G ++ A +L M D+V Y T+L +LC+
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV-------SPDVVTYNTILRSLCDS 217
Query: 239 GKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSS 298
GK ++A+E+L ++L++ CY P + +
Sbjct: 218 GKLKQAMEVLDRMLQR------DCY------------------------------PDVIT 241
Query: 299 YNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDM 358
Y + +S + A K++ EM+DRG P + V +CK R+DEAIK + DM
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN-DM 300
Query: 359 VAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERR 418
+ C PN +NI+L+++ + G + L M +K G + T+ IL+ LCR+
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGL 359
Query: 419 YLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKS 478
A +LE+M P + SYN L+ G C + A+ +LE M+S+G P+I + +
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 479 LASLFCNLEMMKASSEIFNRLRS 501
+ + C ++ + EI N+L S
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSS 442
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 214/465 (46%), Gaps = 20/465 (4%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDV--IEQMRQDSCECKDTV-FASAINIYANAGLVD 97
Y N P +++ RLG+ R I ++ + S D + + I+ Y AG ++
Sbjct: 130 YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 98 EAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLL 157
A+++ + + + ++NT+L+ + +L+ A + +D + V +L
Sbjct: 190 NALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEV-LDRMLQRDCYPDVITYTIL 245
Query: 158 MYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRIS 217
+ A C A+++ EM +GC P+ +Y +L+ G+C +GRL EA L M
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM----P 301
Query: 218 QKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG--- 274
G +++ + +L ++C G++ +A ++L+ +LRKG +N L C G
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG 361
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
R I+ +++ G P+ SYN + E K+D A + + M RG P +
Sbjct: 362 RAIDILEKMPQH----GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
+ ALCK +V++A++++ + + + C P YN ++ L G + ++ L++M
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQ-LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
K D TY L+ L RE + EA + + P A ++NS++ GLC +
Sbjct: 477 AK-DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
A+ +L MI++G P + + L M K + E+ N L
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 198/428 (46%), Gaps = 23/428 (5%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y MIS +G + V+++M S + + + ++G + +A+ + +
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSCGWEVKSRVHALNLLMYALCG 163
Q +C ++ L++ + + A L D C +V + N+L+ +C
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT----YNVLVNGICK 286
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
+GR D A++ +M GC PN ++ I+++ +C GR +A LL M +KG
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML----RKGFSP 342
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSD---GRDIEGT 280
+V + L++ LC G AI+IL K+ + G + YN L C + R IE
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+R++ +G P + +YN M L + K+++A +++ ++ +G P + +
Sbjct: 403 ERMVS----RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
L K + +AIK+++E M A + P++ Y+ L+ L G ++ ++ +++G
Sbjct: 459 LAKAGKTGKAIKLLDE-MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF-ERMGIR 516
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
+ T+ ++ LC+ R+ A L M + P SY LI+GL G EA+
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Query: 461 LEDMISQG 468
L ++ ++G
Sbjct: 577 LNELCNKG 584
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/520 (22%), Positives = 222/520 (42%), Gaps = 49/520 (9%)
Query: 3 IRWPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLG 62
+ +P+ L+P ++ ++++++KNP A +F+ A +R+P Y H+ VY ++ L + +
Sbjct: 2 VVFPKSLSPKHVLKLLKSEKNPRAAFALFDSA-TRHPGYAHSAVVYHHILRRLSETRMVN 60
Query: 63 EMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQ-FNCVNWTQSFNTL 121
+ ++E +R C+C + V S I Y + D+A+ +FK + + F C +S+NTL
Sbjct: 61 HVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTL 120
Query: 122 LQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQG 181
L V + LF V + N+L+ C K + A M +G
Sbjct: 121 LNAFVEAKQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG 179
Query: 182 CYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF 241
P+ SY+ ++ L G+L +A L F +S++G D+ Y L+D ++
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALEL----FDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNA 301
+ A+E+ ++L P + + +S S ++ ++ L +Y++
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 302 MAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV--IEEDMV 359
+ L +D+A+ V E+ +R + + C+ ++ E++++ I E
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 360 AVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII----------- 408
+VN + YNIL+K L G M K G AD+ TY I
Sbjct: 356 SVNIVS----YNILIKGLLENGKIDEATMIWRLMPAK-GYAADKTTYGIFIHGLCVNGYV 410
Query: 409 ------------------------LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSL 444
+++ LC+++R EAS L+++MS + N+L
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 445 IKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
I GL R EA +L +M G P + + L C
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 215/484 (44%), Gaps = 27/484 (5%)
Query: 8 VLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKY-THNGPVYATMISILGTSGRLGEMRD 66
+L +L + + K M+ E S YP THN MIS L GR+ +
Sbjct: 224 ILIDGFLKE--KDHKTAMELWDRLLEDSSVYPNVKTHN-----IMISGLSKCGRVDDCLK 276
Query: 67 VIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
+ E+M+Q+ E ++S I+ +AG VD+A ++F + + ++NT+L
Sbjct: 277 IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC 336
Query: 127 SEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY-----ALCGKGRSDLALQIFQEMDYQG 181
+++ + L W + +++N++ Y L G+ D A I++ M +G
Sbjct: 337 RCGKIKESLEL-------WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 182 CYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF 241
++ +Y I + GLC +G +++A ++ + G D+ Y +++D LC+ +
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQ----EVESSGGHLDVYAYASIIDCLCKKKRL 445
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNA 301
EEA ++ ++ + G++ N L D R E + + E G P++ SYN
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS-FFLREMGKNGCRPTVVSYNI 504
Query: 302 MAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAV 361
+ L K EA + EM + G+KP + + LC+ ++D A+++ + +
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ-FLQS 563
Query: 362 NCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLE 421
+ ++NIL+ L +VG + + M + CTA+ TY L+E +
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR-NCTANLVTYNTLMEGFFKVGDSNR 622
Query: 422 ASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLAS 481
A+ + M P SYN+++KGLC A+ + +D + G P + W L
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Query: 482 LFCN 485
N
Sbjct: 683 AVVN 686
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTAD 402
K S D+A+ V + C P YN LL V ESL + G +
Sbjct: 90 KNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKV-ESLFAYFETAGVAPN 148
Query: 403 RETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLE 462
+TY +L++M C+++ + +A L+ M + + P SY+++I L G+ +A+ +
Sbjct: 149 LQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFD 208
Query: 463 DMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+M +G P+++ + L F + K + E+++RL
Sbjct: 209 EMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 194/445 (43%), Gaps = 49/445 (11%)
Query: 5 WPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEM 64
W V T L +I ++P +AL +F++ + + H+ P Y+++I L S +
Sbjct: 47 WEEVPFLTDLKEI----EDPEEALSLFHQYQEM--GFRHDYPSYSSLIYKLAKSRNFDAV 100
Query: 65 RDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQI 124
++ +R + C++++F I Y AG VD+AI +F I F+CV QS NTL+ +
Sbjct: 101 DQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINV 160
Query: 125 MVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYP 184
+V LE A F D + ++ + N+L+ K + A ++F EM P
Sbjct: 161 LVDNGELEKAKSFF-DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQP 219
Query: 185 NRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEA 244
+ +Y L+ LC + + +A LL M +K + V + L+ LC G++ EA
Sbjct: 220 SVVTYNSLIGFLCRNDDMGKAKSLLEDMI----KKRIRPNAVTFGLLMKGLCCKGEYNEA 275
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAV 304
K+L+ + +G P L +Y +
Sbjct: 276 ------------------------------------KKLMFDMEYRGCKPGLVNYGILMS 299
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
DL +IDEA ++ EM+ R KP I+ V LC RV EA +V+ E M C
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTE-MQMKGCK 358
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
PN+ Y +++ + + + L LN M C T++ ++ L + A
Sbjct: 359 PNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTP-ATFVCMVAGLIKGGNLDHACF 417
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLC 449
+LE M K+ + ++ +L+ LC
Sbjct: 418 VLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 136/326 (41%), Gaps = 10/326 (3%)
Query: 174 FQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLD 233
+QEM ++ YP SY+ L+ L +L + +R + ++ L+
Sbjct: 72 YQEMGFRHDYP---SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRES----LFMGLIQ 124
Query: 234 ALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV 293
+ G ++AI++ KI + N L ++ D ++E K A
Sbjct: 125 HYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTL-INVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 294 PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV 353
P+ S+N + + + A KV EM + +P+ + + + LC+ + +A K
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA-KS 242
Query: 354 IEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEML 413
+ EDM+ PN+ + +L+K L G + + M + GC Y IL+ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYR-GCKPGLVNYGILMSDL 301
Query: 414 CRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEI 473
+ R EA LL +M + P YN L+ LC+ R EA L +M +G P
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 474 SVWKSLASLFCNLEMMKASSEIFNRL 499
+ ++ + FC +E + + N +
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAM 387
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 210/493 (42%), Gaps = 56/493 (11%)
Query: 17 IIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSC 76
+++ +++P L IFN+A S+ + HN Y+ ++ L + + ++ QM+ ++C
Sbjct: 62 LMKRERDPQGVLDIFNKA-SQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETC 120
Query: 77 ECKDTVFASAINIYANAGLVDEAITLFKNI-------PQFNCVNWTQSFNTLLQIMVSED 129
++++F + + ++ + L D+ + +F I P N ++ T L +++
Sbjct: 121 RFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAIS------TCLNLLIDSG 174
Query: 130 RLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQG-CYPNRDS 188
+ + L + ++ N+L+ C G + A + +EM G YPN +
Sbjct: 175 EVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSIT 234
Query: 189 YAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEIL 248
Y+ LM L R EA L M IS++G D V + +++ C G+ E A +IL
Sbjct: 235 YSTLMDCLFAHSRSKEAVELFEDM---ISKEGISPDPVTFNVMINGFCRAGEVERAKKIL 291
Query: 249 SKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYS 308
+ + G C+ P++ +Y+A+
Sbjct: 292 DFMKKNG---------------CN---------------------PNVYNYSALMNGFCK 315
Query: 309 ESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSE 368
KI EA + E++ G K + + C+ DEA+K++ E M A C ++
Sbjct: 316 VGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGE-MKASRCRADTL 374
Query: 369 VYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQ 428
YN++L+ L + G S L+ L++ + G ++ +Y I+L LC +A + L
Sbjct: 375 TYNVILRGLSSEGRSEEALQMLDQWGSE-GVHLNKGSYRIILNALCCNGELEKAVKFLSV 433
Query: 429 MSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEM 488
MS + WP ++N L+ LC G V L + G +P W ++ C
Sbjct: 434 MSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERK 493
Query: 489 MKASSEIFNRLRS 501
+ E+ + L S
Sbjct: 494 LVHVFELLDSLVS 506
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 122/283 (43%), Gaps = 13/283 (4%)
Query: 3 IRWPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLG 62
I +P +T + L + +A+ +F + S+ + + + MI+ +G +
Sbjct: 227 ISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISK-EGISPDPVTFNVMINGFCRAGEVE 285
Query: 63 EMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLL 122
+ +++ M+++ C +++ +N + G + EA F + + T + TL+
Sbjct: 286 RAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLM 345
Query: 123 QIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGC 182
+ A L + ++ N+++ L +GRS+ ALQ+ + +G
Sbjct: 346 NCFCRNGETDEAMKLLGEMKAS-RCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGV 404
Query: 183 YPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFE 242
+ N+ SY I++ LC +G L +A L M S++G + L+ LCE G E
Sbjct: 405 HLNKGSYRIILNALCCNGELEKAVKFLSVM----SERGIWPHHATWNELVVRLCESGYTE 460
Query: 243 EAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
+ +L LR GL + + + S C + ++L+H
Sbjct: 461 IGVRVLIGFLRIGLIPGPKSWGAVVESICKE-------RKLVH 496
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 199/461 (43%), Gaps = 43/461 (9%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
Y + + T+I L + E ++++M Q C+ + +N G +D A
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA- 169
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
FN +N ++EAA ++++ V N ++ +
Sbjct: 170 --------FNLLN----------------KMEAA-----------KIEADVVIFNTIIDS 194
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
LC D AL +F+EM+ +G PN +Y+ L+ LC GR +A+ LL M I +K
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM---IEKKI 251
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
N ++V + L+DA ++GKF EA ++ ++++ + YN L C R ++
Sbjct: 252 N-PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR-LDKA 309
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
K++ + K P L +YN + ++++ ++ EM RG + +
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
L D A KV ++ MV+ P+ Y+ILL L N G LE + M K
Sbjct: 370 LFHDGDCDNAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIK 427
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
D Y ++E +C+ + + L +S+K P +YN++I GLCS EA
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 461 LEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
L+ M G LP+ + +L AS+E+ +RS
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 192/459 (41%), Gaps = 78/459 (16%)
Query: 42 THNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAIT 101
+HN Y +I+ ++ ++ +M + E +S +N Y + + +A+
Sbjct: 42 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 101
Query: 102 LFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYAL 161
L + + T +F TL+ HGLF+ N
Sbjct: 102 LVDQMVEMGYRPDTITFTTLI------------HGLFLHN-------------------- 129
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
++ A+ + M +GC PN +Y +++ GLC G + A +LL M
Sbjct: 130 ----KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM----EAAKI 181
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
D+V++ T++D+LC+ ++A+ + ++ KG++ Y+ L CS GR + ++
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
L+ + + K P+L ++NA+ E K EA+K+ +M R P + + +
Sbjct: 242 -LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
C R+D+A K + E MV+ +C P
Sbjct: 301 CMHDRLDKA-KQMFEFMVSKDCFP------------------------------------ 323
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
D +TY L++ C+ +R + ++L +MS + +Y +LI+GL G A
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 462 EDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+ M+S G P+I + L CN ++ + E+F+ ++
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 161/357 (45%), Gaps = 11/357 (3%)
Query: 147 VKSR----VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRL 202
VKSR + N L+ A+ + DL + + ++M G N +Y IL+ C ++
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 203 HEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC 262
A LL M + G IV +LL+ C + +A+ ++ +++ G +
Sbjct: 62 SLALALLGKMM----KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 117
Query: 263 YNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM 322
+ L + E L+ + +G P+L +Y + L ID A ++ +M
Sbjct: 118 FTTLIHGLFLHNKASEAVA-LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 323 QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN 382
+ + IF + +LCK VD+A+ + +E M PN Y+ L+ L + G
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE-METKGIRPNVVTYSSLISCLCSYGR 235
Query: 383 SAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYN 442
+ + L+ M +K + T+ L++ +E +++EA +L + M +S P +YN
Sbjct: 236 WSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 443 SLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
SLI G C R +A E M+S+ P++ + +L FC + ++ +E+F +
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 124/271 (45%), Gaps = 22/271 (8%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K N + +I G+ E + + M + S + + S IN + +D+A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+F+ + +C ++NTL++ R+E LF + S V V L+
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV-TYTTLIQ 368
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
L G D A ++F++M G P+ +Y+IL+ GLC++G+L +A + M QK
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-----QK 423
Query: 220 GNGE-DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
+ DI +Y T+++ +C+ GK ++ ++ + KG+K YN + CS
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS------ 477
Query: 279 GTKRLIHE--ALIK-----GSVPSLSSYNAM 302
KRL+ E AL+K G +P +YN +
Sbjct: 478 --KRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 328 KPTRAIFEAK--VAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAA 385
+P +IFE ++A+ K+ + D I + E M + N YNIL+ +
Sbjct: 5 RPLPSIFEFNKLLSAIAKMKKFDLVIS-LGEKMQRLGISHNLYTYNILINCFCRRSQISL 63
Query: 386 VLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
L L KM K+G T LL C +R +A L++QM Y P ++ +LI
Sbjct: 64 ALALLGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 446 KGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
GL + EAV ++ M+ +G P + + + + C + + + N++ +
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 218/492 (44%), Gaps = 44/492 (8%)
Query: 7 RVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRD 66
R L P+ + ++R+Q + AL F A ++ +Y H+ VY +M+ +L + R
Sbjct: 170 RSLKPSQVCAVLRSQDDERVALKFFYWADRQW-RYRHDPMVYYSMLEVLSKTKLCQGSRR 228
Query: 67 VIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
V+ M++ F+ + Y+ AG + +A+ + + + NT + + V
Sbjct: 229 VLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 288
Query: 127 SEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNR 186
+RLE A F++ + V N ++ C R + A+++ ++M +GC P++
Sbjct: 289 RANRLEKAL-RFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDK 347
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIE 246
SY +M LC + R+ E L+ M + G D V Y TL+ L + +EA+
Sbjct: 348 VSYYTIMGYLCKEKRIVEVRDLMKKM---AKEHGLVPDQVTYNTLIHMLTKHDHADEALW 404
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
L KG + K Y+ + + C +GR
Sbjct: 405 FLKDAQEKGFRIDKLGYSAIVHALCKEGR------------------------------- 433
Query: 307 YSESKIDEADKVIVEMQDRGFKPTRAI-FEAKVAALCKVSRVDEAIKVIEEDMVAVNCLP 365
+ EA +I EM +G P + + A V C++ VD+A K+++ M P
Sbjct: 434 -----MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQV-MHTHGHKP 487
Query: 366 NSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQL 425
N+ Y LL + G S E +N MS++ + + TY +++ L RE + EA +
Sbjct: 488 NTVSYTALLNGMCRTGKSLEAREMMN-MSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Query: 426 LEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCN 485
+ +M +K ++P N L++ LC GR +EA ++E+ +++G + + ++ FC
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 486 LEMMKASSEIFN 497
+ + A+ + +
Sbjct: 607 NDELDAALSVLD 618
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 153/347 (44%), Gaps = 13/347 (3%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P +T L ++ + +AL +A+ + + G Y+ ++ L GR+ E +
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLG--YSAIVHALCKEGRMSEAK 438
Query: 66 DVIEQM-RQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQI 124
D+I +M + C + + +N + G VD+A L + + T S+ LL
Sbjct: 439 DLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNG 498
Query: 125 MVSEDR-LEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCY 183
M + LEA + + W S ++ ++M+ L +G+ A + +EM +G +
Sbjct: 499 MCRTGKSLEAREMMNMSEEHWWSPNSITYS--VIMHGLRREGKLSEACDVVREMVLKGFF 556
Query: 184 PNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEE 243
P +L++ LC DGR HEA + KG ++V + T++ C++ + +
Sbjct: 557 PGPVEINLLLQSLCRDGRTHEARKFMEECL----NKGCAINVVNFTTVIHGFCQNDELDA 612
Query: 244 AIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMA 303
A+ +L + A Y L + GR E T+ L+ + L KG P+ +Y +
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATE-LMKKMLHKGIDPTPVTYRTVI 671
Query: 304 VDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
K+D+ ++ +M R + R I+ + LC + +++EA
Sbjct: 672 HRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEA 716
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 109/225 (48%), Gaps = 3/225 (1%)
Query: 278 EGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAK 337
+G++R++ +G + +++ + V ++ +A KV+ MQ G +P I
Sbjct: 224 QGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTT 283
Query: 338 VAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKV 397
+ + +R+++A++ +E M V +PN YN +++ ++ +E L M K
Sbjct: 284 IDVFVRANRLEKALRFLER-MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSK- 341
Query: 398 GCTADRETYIILLEMLCRERRYLEASQLLEQMSIK-SYWPCADSYNSLIKGLCSLGRQYE 456
GC D+ +Y ++ LC+E+R +E L+++M+ + P +YN+LI L E
Sbjct: 342 GCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADE 401
Query: 457 AVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
A+ +L+D +G + + ++ C M + ++ N + S
Sbjct: 402 ALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLS 446
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 19/317 (5%)
Query: 14 LSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQ 73
L+ + RT K+ ++A + N ++ + ++ N Y+ ++ L G+L E DV+ +M
Sbjct: 496 LNGMCRTGKS-LEAREMMNMSEEHW--WSPNSITYSVIMHGLRREGKLSEACDVVREMVL 552
Query: 74 DSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEA 133
+ G EA + C +F T++ D L+A
Sbjct: 553 KGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDA 612
Query: 134 AHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILM 193
A + +D+ + V L+ L KGR A ++ ++M ++G P +Y ++
Sbjct: 613 ALSV-LDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671
Query: 194 KGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILR 253
C G++ + +L M R QK +Y +++ LC GK EEA +L K+LR
Sbjct: 672 HRYCQMGKVDDLVAILEKMISR--QKCR----TIYNQVIEKLCVLGKLEEADTLLGKVLR 725
Query: 254 KGLKA-PKRCYNRLDLSQCSDGRDIEGTK---RLIHEALIKGSVPSLSSYNAMAVDLYSE 309
++ K CY ++ G + K R+ + LI P + ++ L +
Sbjct: 726 TASRSDAKTCYALME-GYLKKGVPLSAYKVACRMFNRNLI----PDVKMCEKLSKRLVLK 780
Query: 310 SKIDEADKVIVEMQDRG 326
K+DEADK+++ + +RG
Sbjct: 781 GKVDEADKLMLRLVERG 797
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 185/438 (42%), Gaps = 11/438 (2%)
Query: 67 VIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
+E+++ F I+ YA G+ ++A+ F + +F+C ++N +L++M+
Sbjct: 114 TLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMM 173
Query: 127 SEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNR 186
E+ + ++ +LM L KGR+ A ++F +M +G PNR
Sbjct: 174 REEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNR 233
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIE 246
+Y IL+ GLC G +A L Y M GN D V + LLD C+ G+ EA E
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEM----QTSGNYPDSVAHNALLDGFCKLGRMVEAFE 289
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
+L + G R Y+ L + R L L K P + Y + L
Sbjct: 290 LLRLFEKDGFVLGLRGYSSL-IDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGL 348
Query: 307 YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPN 366
KI++A K++ M +G P + A + ALC ++E + ++ +M P+
Sbjct: 349 SKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG-RSLQLEMSETESFPD 407
Query: 367 SEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLL 426
+ + IL+ ++ G E ++ K GC+ T+ L++ LC+ EA LL
Sbjct: 408 ACTHTILICSMCRNGLVREAEEIFTEIEKS-GCSPSVATFNALIDGLCKSGELKEARLLL 466
Query: 427 EQMSIKS----YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASL 482
+M + + + S N + G +A L G P+I + L +
Sbjct: 467 HKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLING 526
Query: 483 FCNLEMMKASSEIFNRLR 500
FC + + ++ N L+
Sbjct: 527 FCRAGDIDGALKLLNVLQ 544
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 205/464 (44%), Gaps = 30/464 (6%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y+++I L + R + ++ M + + + ++ I + AG +++A+ L ++P
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALN--LLMYALCGKG 165
T +N +++ + LE L ++ S E +S A +L+ ++C G
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS---ETESFPDACTHTILICSMCRNG 422
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLY--------SMFWRIS 217
A +IF E++ GC P+ ++ L+ GLC G L EA LL+ S+F R+S
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLS 482
Query: 218 QKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDI 277
GN D + E G +A L+ G YN L C G DI
Sbjct: 483 HSGNRS--------FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAG-DI 533
Query: 278 EGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAK 337
+G +L++ +KG P +YN + L+ + +EA K+ D F+ + A++ +
Sbjct: 534 DGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDD--FRHSPAVYRSL 591
Query: 338 VAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKV 397
+ C+ +V A + + + ++CL + E N + + + A+ + ++K
Sbjct: 592 MTWSCRKRKVLVAFNLWMKYLKKISCL-DDETANEIEQCFKEGETERALRRLIELDTRKD 650
Query: 398 GCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEA 457
T Y I L LC+ R+ EA + + K S LI GLC + A
Sbjct: 651 ELTLG--PYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAA 708
Query: 458 V-MWLEDMISQGKL-PEISVWKSLASLFCNLEMMKASSEIFNRL 499
+ ++L + + KL P + + L+SL + E M+ S++ NR+
Sbjct: 709 IEVFLYTLDNNFKLMPRVCNY-LLSSLLESTEKMEIVSQLTNRM 751
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 186/432 (43%), Gaps = 43/432 (9%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y +I+ R+ + V+++MR + I + G +D A+ + +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS 167
NC ++ L++ + E ++ A L +D +K + N ++ +C +G
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKL-MDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVV 227
D A ++ + ++ +GC P+ SY IL++ L + G+ E L+ MF S+K + ++V
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF---SEKCD-PNVVT 335
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEA 287
Y L+ LC DGK EEA+ +L +L+ E
Sbjct: 336 YSILITTLCRDGKIEEAMNLL---------------------------------KLMKE- 361
Query: 288 LIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRV 347
KG P SY+ + E ++D A + + M G P + +A LCK +
Sbjct: 362 --KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 348 DEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYI 407
D+A+++ + + V C PNS YN + L + G+ L + +M G D TY
Sbjct: 420 DQALEIFGK-LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYN 477
Query: 408 ILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQ 467
++ LCRE EA +LL M + P +YN ++ G C R +A+ LE M+
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 468 GKLPEISVWKSL 479
G P + + L
Sbjct: 538 GCRPNETTYTVL 549
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 163/330 (49%), Gaps = 7/330 (2%)
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
N+++ +LC +G+ DLAL++ ++ C P +Y IL++ +G + EA L+ M
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
R G D+ Y T++ +C++G + A E++ + KG + YN L + + G
Sbjct: 257 R----GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
+ EG K L+ + + P++ +Y+ + L + KI+EA ++ M+++G P +
Sbjct: 313 KWEEGEK-LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
+ +AA C+ R+D AI+ +E M++ CLP+ YN +L L G + LE K+
Sbjct: 372 DPLIAAFCREGRLDVAIEFLET-MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
+ VGC+ + +Y + L + A ++ +M P +YNS+I LC G
Sbjct: 431 E-VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFC 484
EA L DM S P + + + FC
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 159/349 (45%), Gaps = 7/349 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y +I G + E ++++M + + + I G+VD A + +N+
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
C S+N LL+ ++++ + E L + V ++L+ LC G+
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMT-KMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
+ A+ + + M +G P+ SY L+ C +GRL A L +M G DIV
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI----SDGCLPDIV 404
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y T+L LC++GK ++A+EI K+ G YN + + S G I +I E
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL-HMILE 463
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
+ G P +YN+M L E +DEA +++V+M+ F P+ + + CK R
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSK 395
+++AI V+E MV C PN Y +L++ + G A +E N + +
Sbjct: 524 IEDAINVLES-MVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 159/338 (47%), Gaps = 8/338 (2%)
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
C G +L + + M +G P+ L+KG + +A ++ I +K
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-----EILEKFG 154
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
D+ Y L++ C+ + ++A +L ++ K YN + S CS G+ ++
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK-LDLAL 213
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
+++++ L P++ +Y + E +DEA K++ EM RG KP + + +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
CK VD A +++ ++ C P+ YNILL+ L N G + + KM + C
Sbjct: 274 CKEGMVDRAFEMVR-NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCDP 331
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
+ TY IL+ LCR+ + EA LL+ M K P A SY+ LI C GR A+ +L
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 462 EDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
E MIS G LP+I + ++ + C + EIF +L
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 176/385 (45%), Gaps = 43/385 (11%)
Query: 115 TQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIF 174
T FNTLL + E R+ A L VD K + LN L+ LC G+ A+ +
Sbjct: 158 TVIFNTLLNGLCLECRVSEALEL-VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 175 QEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDA 234
M G PN +Y ++ +C G+ A LL M ++ D V Y ++D
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM----EERNIKLDAVKYSIIIDG 272
Query: 235 LCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP 294
LC+DG + A + +++ KG KA YN L C+ GR +G K L+ + + + P
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK-LLRDMIKRKISP 331
Query: 295 SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVI 354
++ +++ + E K+ EAD+++ EM RG P + + + CK +R++EAI+++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 355 EEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLC 414
D++ +SK GC D T+ IL+ C
Sbjct: 392 --DLM---------------------------------ISK--GCDPDIMTFNILINGYC 414
Query: 415 RERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEIS 474
+ R + +L +MS++ +YN+L++G C G+ A ++M+S+ P+I
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 475 VWKSLASLFCNLEMMKASSEIFNRL 499
+K L C+ ++ + EIF ++
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKI 499
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 208/455 (45%), Gaps = 14/455 (3%)
Query: 50 TMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQF 109
T+++ L +G++ + +I++M + + + + +N+ +G A+ L + + +
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 110 NCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDL 169
N ++ ++ + + L+ A LF + K+ + N L+ C GR D
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAGRWDD 316
Query: 170 ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYR 229
++ ++M + PN ++++L+ +G+L EA LL M Q+G + + Y
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM----QRGIAPNTITYN 372
Query: 230 TLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALI 289
+L+D C++ + EEAI+++ ++ KG +N L C R +G + L E +
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE-LFREMSL 431
Query: 290 KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDE 349
+G + + +YN + K++ A K+ EM R +P ++ + LC +++
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 350 AIKV---IEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETY 406
A+++ IE+ + ++ +Y I++ + N + + K G D Y
Sbjct: 492 ALEIFGKIEKSKMELDI----GIYMIIIHGMCNASKVDDAWDLFCSLPLK-GVKLDARAY 546
Query: 407 IILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMIS 466
I++ LCR+ +A L +M+ + + P +YN LI+ A +E+M S
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606
Query: 467 QGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
G ++S K + ++ + E+ K+ ++ + R+
Sbjct: 607 SGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRA 641
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 148/333 (44%), Gaps = 14/333 (4%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
A ++FNE + + + + Y T+I +GR + ++ M + F+
Sbjct: 282 AFNLFNEMEIK--GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAA---HGLFVDNSC 143
I+ + G + EA L K + Q T ++N+L+ E+RLE A L + C
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH 203
++ + N+L+ C R D L++F+EM +G N +Y L++G C G+L
Sbjct: 400 DPDIMT----FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 204 EATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
A L M R + DIV Y+ LLD LC++G+ E+A+EI KI + ++ Y
Sbjct: 456 VAKKLFQEMVSRRVRP----DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
+ C+ + ++ L +KG +YN M +L + + +AD + +M
Sbjct: 512 MIIIHGMCNASK-VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+ G P + + A A ++IEE
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 181/416 (43%), Gaps = 16/416 (3%)
Query: 92 NAGLV----DEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEV 147
++GLV D+A+ LF+++ Q + FN L + + E L +
Sbjct: 61 SSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLAL-CKQMESKGI 119
Query: 148 KSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATH 207
++ L++++ C + A ++ G P+ + L+ GLC + R+ EA
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179
Query: 208 LLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLD 267
L+ R+ + G+ ++ TL++ LC +GK +A+ ++ +++ G + + Y +
Sbjct: 180 LVD----RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 268 LSQCSDGRDIEGTK--RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDR 325
C G+ + R + E IK Y+ + L + +D A + EM+ +
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDA---VKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 326 GFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAA 385
GFK + + C R D+ K++ DM+ PN +++L+ + G
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLR-DMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 386 VLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
+ L +M ++ G + TY L++ C+E R EA Q+++ M K P ++N LI
Sbjct: 352 ADQLLKEMMQR-GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 446 KGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
G C R + + +M +G + + +L FC ++ + ++F + S
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 194/432 (44%), Gaps = 8/432 (1%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
Y N ++T+I+ L GR+ E +++++M + + + +N +G EA+
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
L + ++ C ++ +L +M + A L +K ++++
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDG 272
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
LC G D A +F EM+ +G N +Y IL+ G C+ GR + LL M I +K
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM---IKRKI 329
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
N ++V + L+D+ ++GK EA E+ +++ +G+ Y L C + ++
Sbjct: 330 N-PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH-LDKA 387
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+++ + KG P++ ++N + ++ID+ ++ +M RG + +
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
C++ +++ A ++ +E MV+ PN Y ILL L + G S LE K+ K
Sbjct: 448 FCELGKLNVAKELFQE-MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS-KME 505
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
D Y I++ +C + +A L + +K P +YN +I GLC G EA +
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 461 LEDMISQGKLPE 472
M G P+
Sbjct: 566 FRKMEEDGHAPD 577
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 176/382 (46%), Gaps = 8/382 (2%)
Query: 115 TQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIF 174
T +F+TL+ + E R+ A L VD K + +N L+ LC G+ A+ +
Sbjct: 158 TITFSTLINGLCLEGRVSEALEL-VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 175 QEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDA 234
+M GC PN +Y ++ +C G+ A LL M ++ D V Y ++D
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM----EERNIKLDAVKYSIIIDG 272
Query: 235 LCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP 294
LC+ G + A + +++ KG+ YN L C+ GR +G K L+ + + + P
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK-LLRDMIKRKINP 331
Query: 295 SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVI 354
++ +++ + E K+ EA+++ EM RG P + + + CK + +D+A +++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 355 EEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLC 414
+ MV+ C PN +NIL+ LE KMS + G AD TY L++ C
Sbjct: 392 DL-MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR-GVVADTVTYNTLIQGFC 449
Query: 415 RERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEIS 474
+ A +L ++M + P +Y L+ GLC G +A+ E + +I
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 475 VWKSLASLFCNLEMMKASSEIF 496
++ + CN + + ++F
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLF 531
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 178/418 (42%), Gaps = 22/418 (5%)
Query: 93 AGLVD----EAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVK 148
+GLVD +AI LF+++ + F+ L + + + L E+K
Sbjct: 62 SGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ----MELK 117
Query: 149 SRVH---ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
H L++++ C + LA ++ G PN +++ L+ GLC +GR+ EA
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR 265
L+ R+ + G+ D++ TL++ LC GK EA+ ++ K++ G + Y
Sbjct: 178 LELVD----RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 266 LDLSQCSDGRDIEGTK--RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
+ C G+ + R + E IK Y+ + L +D A + EM+
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDA---VKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
+G + + C R D+ K++ DM+ PN +++L+ + G
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLR-DMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 384 AAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS 443
E L+K G D TY L++ C+E +A+Q+++ M K P ++N
Sbjct: 350 REA-EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 444 LIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
LI G C R + + M +G + + + +L FC L + + E+F + S
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 150/333 (45%), Gaps = 14/333 (4%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
A ++FNE + + T N Y +I +GR + ++ M + F+
Sbjct: 282 AFNLFNEMEMK--GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAH---GLFVDNSC 143
I+ + G + EA L K + T ++ +L+ E+ L+ A+ L V C
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH 203
+++ N+L+ C R D L++F++M +G + +Y L++G C G+L+
Sbjct: 400 DPNIRT----FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 204 EATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
A L M R +IV Y+ LLD LC++G+ E+A+EI KI + ++ Y
Sbjct: 456 VAKELFQEMVSRKVP----PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
N + C+ + ++ L +KG P + +YN M L + + EA+ + +M+
Sbjct: 512 NIIIHGMCNASK-VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+ G P + + A +++K+IEE
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 123/288 (42%), Gaps = 6/288 (2%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K N ++ +I G+L E ++ ++M + S I+ + +D+A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+ + C ++FN L+ +R++ LF S V V N L+
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV-TYNTLIQ 446
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
C G+ ++A ++FQEM + PN +Y IL+ GLC +G +A + F +I +
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI----FEKIEKS 502
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
DI +Y ++ +C K ++A ++ + KG+K + YN + C G +
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-PLSE 561
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
+ L + G P +YN + + ++ K+I E++ GF
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 175/369 (47%), Gaps = 9/369 (2%)
Query: 10 TPTYLSQII-RTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVI 68
TP ++ ++ R + KAL F+ + + +Y H+ + I I + +I
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 69 EQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSE 128
+MR FA YA+AG D+A+ LF N+ + C SFNT+L ++
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 174
Query: 129 DRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDS 188
R+E A+ LF + V + + N+++ C R+ AL++ +EM +G PN +
Sbjct: 175 KRVEKAYELFRALRGRFSVDTVTY--NVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 189 YAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEIL 248
Y ++KG G++ A + F + ++ D+V Y T++ G+ + A +
Sbjct: 233 YNTMLKGFFRAGQIRHA----WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 249 SKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYS 308
+++R+G+ YN + C ++E + E + +G P++++YN + L+
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKD-NVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 309 ESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSE 368
+ ++++ M++ G +P + + + S V++A+ + E+ M + +CLPN +
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK-MGSGDCLPNLD 406
Query: 369 VYNILLKNL 377
YNIL+ +
Sbjct: 407 TYNILISGM 415
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 132/304 (43%), Gaps = 15/304 (4%)
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
G+ D A+++F M GC+ + S+ ++ LC R+ +A L ++ R S D
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-----D 194
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
V Y +L+ C + +A+E+L +++ +G+ YN + L I
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM-LKGFFRAGQIRHAWEFF 253
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
E + + +Y + +I A V EM G P+ A + A + LCK
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
V+ A+ V+ E+MV PN YN+L++ L + G + E + +M + GC + +
Sbjct: 314 DNVENAV-VMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE-GCEPNFQ 371
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
TY +++ +A L E+M P D+YN LI G+ R EDM
Sbjct: 372 TYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRS-------EDM 424
Query: 465 ISQG 468
+ G
Sbjct: 425 VVAG 428
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 130/301 (43%), Gaps = 14/301 (4%)
Query: 184 PNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEE 243
P+ ++AI+ + G+ +A L +M + G +D+ + T+LD LC+ + E+
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNM----HEHGCFQDLASFNTILDVLCKSKRVEK 179
Query: 244 AIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMA 303
A E+ + LR YN + C R + + ++ E + +G P+L++YN M
Sbjct: 180 AYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALE-VLKEMVERGINPNLTTYNTML 237
Query: 304 VDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
+ +I A + +EM+ R + + V + A V +E M+
Sbjct: 238 KGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE-MIREGV 296
Query: 364 LPNSEVYNILLKNL---RNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYL 420
LP+ YN +++ L NV N+ + E + + + T TY +L+ L +
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVT----TYNVLIRGLFHAGEFS 352
Query: 421 EASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLA 480
+L+++M + P +YN +I+ +A+ E M S LP + + L
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Query: 481 S 481
S
Sbjct: 413 S 413
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 187/428 (43%), Gaps = 16/428 (3%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y +I L S R+ + ++ MR+ + + + IN ++N G V A L +
Sbjct: 305 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 364
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
F +FN L+ +SE + A +F S V + +L+ LC
Sbjct: 365 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV-SYGVLLDGLCKNAE 423
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
DLA + M G R +Y ++ GLC +G L EA LL M S+ G DIV
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM----SKDGIDPDIV 479
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y L++ C+ G+F+ A EI+ +I R GL Y+ L + C G E + I+E
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR--IYE 537
Query: 287 ALI-KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
A+I +G ++N + L K+ EA++ + M G P F+ +
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN---SAAVLESLNKMSKKVGCTAD 402
+A V +E M V P Y LLK L G+ + L+SL+ + V D
Sbjct: 598 EGLKAFSVFDE-MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV----D 652
Query: 403 RETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLE 462
Y LL +C+ +A L +M +S P + +Y SLI GLC G+ A+++ +
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 712
Query: 463 DMISQGKL 470
+ ++G +
Sbjct: 713 EAEARGNV 720
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 153/355 (43%), Gaps = 25/355 (7%)
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
V+ N ++ ++ G +EM + P+ ++ IL+ LC +G ++++L+
Sbjct: 198 VYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQ 257
Query: 211 SMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQ 270
M + G IV Y T+L C+ G+F+ AIE+L + KG+ A YN L
Sbjct: 258 KM----EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 313
Query: 271 CSDGRDIEG-------TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
C R +G KR+IH P+ +YN + +E K+ A +++ EM
Sbjct: 314 CRSNRIAKGYLLLRDMRKRMIH--------PNEVTYNTLINGFSNEGKVLIASQLLNEML 365
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEV-YNILLKNL-RNVG 381
G P F A + EA+K+ M+ L SEV Y +LL L +N
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFY--MMEAKGLTPSEVSYGVLLDGLCKNAE 423
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
A K+ G R TY +++ LC+ EA LL +MS P +Y
Sbjct: 424 FDLA--RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 481
Query: 442 NSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIF 496
++LI G C +GR A + + G P ++ +L C + +K + I+
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 189/457 (41%), Gaps = 16/457 (3%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+ +I++L G + ++++M + + + ++ Y G AI L ++
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVH----ALNLLMYALC 162
++N L+ + +R+ + L D K +H N L+
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR-----KRMIHPNEVTYNTLINGFS 349
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
+G+ +A Q+ EM G PN ++ L+ G +G EA MF+ + KG
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA----LKMFYMMEAKGLT 405
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
V Y LLD LC++ +F+ A ++ R G+ + Y + C +G E
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV- 464
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
L++E G P + +Y+A+ + A +++ + G P I+ + C
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTAD 402
++ + EAI+ I E M+ + +N+L+ +L G A E + M+ G +
Sbjct: 525 RMGCLKEAIR-IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD-GILPN 582
Query: 403 RETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLE 462
++ L+ L+A + ++M+ + P +Y SL+KGLC G EA +L+
Sbjct: 583 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 642
Query: 463 DMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+ + + ++ +L + C + + +F +
Sbjct: 643 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 184/433 (42%), Gaps = 11/433 (2%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+T + + +++ L +G++ E + + M D F IN Y N+G +A
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 603
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
++F + + ++ +LL+ + L A F+ + N L+ A
Sbjct: 604 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK-FLKSLHAVPAAVDTVMYNTLLTA 662
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQ-K 219
+C G A+ +F EM + P+ +Y L+ GLC G+ ++ +F + ++ +
Sbjct: 663 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT-----VIAILFAKEAEAR 717
Query: 220 GNG-EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
GN + V+Y +D + + G+++ I ++ G P + S IE
Sbjct: 718 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG-HTPDIVTTNAMIDGYSRMGKIE 776
Query: 279 GTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKV 338
T L+ E + P+L++YN + + + + + G P + + V
Sbjct: 777 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836
Query: 339 AALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVG 398
+C+ + ++ +K+++ + + +N+L+ G + L K+ +G
Sbjct: 837 LGICESNMLEIGLKILKA-FICRGVEVDRYTFNMLISKCCANGEINWAFD-LVKVMTSLG 894
Query: 399 CTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAV 458
+ D++T ++ +L R R+ E+ +L +MS + P + Y LI GLC +G A
Sbjct: 895 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Query: 459 MWLEDMISQGKLP 471
+ E+MI+ P
Sbjct: 955 VVKEEMIAHKICP 967
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/488 (19%), Positives = 186/488 (38%), Gaps = 31/488 (6%)
Query: 20 TQKNPMKALHIFN--EAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCE 77
++ N +AL +F EAK P Y ++ L + R +M+++
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVS----YGVLLDGLCKNAEFDLARGFYMRMKRNGVC 440
Query: 78 CKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL 137
+ I+ G +DEA+ L + + +++ L+ R + A
Sbjct: 441 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK-- 498
Query: 138 FVDNSCGWEVKSRVHALNL---------LMYALCGKGRSDLALQIFQEMDYQGCYPNRDS 188
E+ R++ + L L+Y C G A++I++ M +G + +
Sbjct: 499 --------EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550
Query: 189 YAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEIL 248
+ +L+ LC G++ EA + M + G + V + L++ G+ +A +
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCM----TSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 249 SKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYS 308
++ + G Y L C G E K L + +V ++ YN + +
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM-YNTLLTAMCK 665
Query: 309 ESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSE 368
+ +A + EM R P + + ++ LC+ + AI +E N LPN
Sbjct: 666 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 725
Query: 369 VYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQ 428
+Y + + G A + +M +G T D T +++ R + + + LL +
Sbjct: 726 MYTCFVDGMFKAGQWKAGIYFREQMDN-LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 784
Query: 429 MSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEM 488
M ++ P +YN L+ G + + +I G LP+ SL C M
Sbjct: 785 MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 844
Query: 489 MKASSEIF 496
++ +I
Sbjct: 845 LEIGLKIL 852
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 134/315 (42%), Gaps = 7/315 (2%)
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
G+ + + EM Q PN +Y IL+ G + R +T L ++ I G D
Sbjct: 773 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHG--YSKRKDVSTSFL--LYRSIILNGILPD 828
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
+ +L+ +CE E ++IL + +G++ + +N L +S+C +I L+
Sbjct: 829 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML-ISKCCANGEINWAFDLV 887
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
G + +AM L + E+ V+ EM +G P + + LC+V
Sbjct: 888 KVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRV 947
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
+ A V++E+M+A P + + +++ L G + L M K+
Sbjct: 948 GDIKTAF-VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM-LKMKLVPTIA 1005
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
++ L+ + C+ +EA +L MS SYN LI GLC+ G A E+M
Sbjct: 1006 SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065
Query: 465 ISQGKLPEISVWKSL 479
G L + +K+L
Sbjct: 1066 KGDGFLANATTYKAL 1080
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 97/253 (38%), Gaps = 38/253 (15%)
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
VY L+ +G ++++EI + G N + S G D+ + E
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS-VWSFLKE 223
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
L + P ++++N + L +E +++ ++ +M+ G+ PT + + CK R
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETY 406
AI E L+ M K G AD TY
Sbjct: 284 FKAAI------------------------------------ELLDHMKSK-GVDADVCTY 306
Query: 407 IILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMIS 466
+L+ LCR R + LL M + P +YN+LI G + G+ A L +M+S
Sbjct: 307 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Query: 467 QGKLPEISVWKSL 479
G P + +L
Sbjct: 367 FGLSPNHVTFNAL 379
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 366 NSEVY--NILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
N VY N +L ++ G +V L +M K+ C D T+ IL+ +LC E + ++S
Sbjct: 195 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKIC-PDVATFNILINVLCAEGSFEKSS 253
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
L+++M Y P +YN+++ C GR A+ L+ M S+G ++ + L
Sbjct: 254 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 313
Query: 484 C 484
C
Sbjct: 314 C 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 3 IRWPRVLTPTYLSQIIRTQKNPMKAL-------HIFNEAKSRYPKYTHNG--PVYATMIS 53
I W L S I K+ A+ H F E++ + + G P I
Sbjct: 880 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 939
Query: 54 ILGTSGRLGEMRD---VIEQMRQDSCECKDTVFASA-INIYANAGLVDEAITLFKNIPQF 109
++ R+G+++ V E+M C V SA + A G DEA L + + +
Sbjct: 940 LINGLCRVGDIKTAFVVKEEMIAHKI-CPPNVAESAMVRALAKCGKADEATLLLRFMLKM 998
Query: 110 NCVNWTQSFNTLLQIMVSE-DRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSD 168
V SF TL+ + + +EA V ++CG +K + + N+L+ LC KG
Sbjct: 999 KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG--LKLDLVSYNVLITGLCAKGDMA 1056
Query: 169 LALQIFQEMDYQGCYPNRDSYAILMKGL 196
LA ++++EM G N +Y L++GL
Sbjct: 1057 LAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 2/194 (1%)
Query: 309 ESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSE 368
E I ++ ++ M GF P+ A + ++ K S D ++ ++M+ P+
Sbjct: 176 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK-SGEDVSVWSFLKEMLKRKICPDVA 234
Query: 369 VYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQ 428
+NIL+ L G+ + KM K G TY +L C++ R+ A +LL+
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKS-GYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 293
Query: 429 MSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEM 488
M K +YN LI LC R + + L DM + P + +L + F N
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 489 MKASSEIFNRLRSL 502
+ +S++ N + S
Sbjct: 354 VLIASQLLNEMLSF 367
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 208/462 (45%), Gaps = 17/462 (3%)
Query: 46 PVYATMISILGT---SGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
P T+ S+L S R+ + +++QM + + F + I+ EA+ L
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
+ Q C ++ T++ + ++ A L G ++++ V N ++ LC
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVIYNTIIDGLC 269
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
D AL +F EMD +G P+ +Y+ L+ LC+ GR +A+ LL M I +K N
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM---IERKIN- 325
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
++V + L+DA ++GK EA ++ +++++ + Y+ L C R ++ K
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR-LDEAKH 384
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
+ + K P++ +Y+ + +++E ++ EM RG + +
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSA---AVLESLNKMSKKVGC 399
+ D A V ++ MV+V PN YNILL L G A V E L + + +
Sbjct: 445 QARDCDNAQMVFKQ-MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME--- 500
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVM 459
D TY I++E +C+ + + +L +S+K P +YN++I G C G + EA
Sbjct: 501 -PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 460 WLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
L+ M G LP + +L +AS+E+ +RS
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 176/408 (43%), Gaps = 10/408 (2%)
Query: 96 VDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALN 155
VD+A+ LF ++ + FN LL + ++ E L + + ++ +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISL-GEQMQTLGISHDLYTYS 122
Query: 156 LLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWR 215
+ + C + + LAL + +M G P+ + + L+ G CH R+ +A L+ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-- 180
Query: 216 ISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR 275
+ G D + TL+ L K EA+ ++ +++++G + Y + C G
Sbjct: 181 --EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG- 237
Query: 276 DIEGTKRLIHEALIKGSVPS-LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
DI+ L+ + + KG + + + YN + L +D+A + EM ++G +P +
Sbjct: 238 DIDLALSLLKK-MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
+ ++ LC R +A +++ DM+ PN ++ L+ G + ++M
Sbjct: 297 SSLISCLCNYGRWSDASRLLS-DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
K+ D TY L+ C R EA + E M K +P +Y++LIKG C R
Sbjct: 356 KR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRSL 502
E + +M +G + + +L F + +F ++ S+
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 6/288 (2%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K N ++ +I G+L E + ++M + S + ++S IN + +DEA
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+F+ + +C +++TL++ R+E LF + S V + V L++
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYTTLIH 441
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
D A +F++M G +PN +Y IL+ GLC +G+L +A +F + +
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM----VVFEYLQRS 497
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
DI Y +++ +C+ GK E+ E+ + KG+ YN + C G E
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK-EE 556
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
L+ + G +P+ +YN + + + + ++I EM+ GF
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 211/494 (42%), Gaps = 41/494 (8%)
Query: 42 THNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAIT 101
+HN Y+ +I+ +L V+ +M + E S +N + + + +A++
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 102 LFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAA------------------HGLFVDNSC 143
L + + + +FNTL+ + +R A +G+ V+ C
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 144 G----------------WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRD 187
+++ V N ++ ALC + AL +F EMD +G PN
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 188 SYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEI 247
+Y L++ LC+ GR +A+ LL M I +K N ++V + L+DA ++GK EA ++
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDM---IERKIN-PNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 248 LSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLY 307
+++++ + Y+ L C R ++ K + + K P++ +YN +
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDR-LDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 308 SESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNS 367
++DE ++ EM RG + + + D A +++ + MV+ LP+
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA-QIVFKQMVSDGVLPDI 466
Query: 368 EVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLE 427
Y+ILL L N G L + + D TY I++E +C+ + + L
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 428 QMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLE 487
+S+K P +Y +++ G C G + EA +M +G LP+ + +L
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 488 MMKASSEIFNRLRS 501
AS+E+ +RS
Sbjct: 586 DKAASAELIREMRS 599
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 179/405 (44%), Gaps = 24/405 (5%)
Query: 107 PQF-NCVNWTQSFNTL------LQIMVSED-RLEAAHGLFVDNSCGWEVKSR----VHAL 154
P F +C W + F+ + + I D +L+ A LF D VKSR +
Sbjct: 30 PSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGD-----MVKSRPFPSIVEF 84
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
+ L+ A+ + DL + + ++M G N +Y+IL+ C +L A +L M
Sbjct: 85 SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM- 143
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
+ G DIV +LL+ C + +A+ ++ +++ G + +N L
Sbjct: 144 ---KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
R E L+ ++KG P L +Y + L ID A ++ +M+ +P I+
Sbjct: 201 RASEAVA-LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
+ ALC V++A+ + E M PN YN L++ L N G + L+ M
Sbjct: 260 NTIIDALCNYKNVNDALNLFTE-MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
++ + T+ L++ +E + +EA +L ++M +S P +Y+SLI G C R
Sbjct: 319 ER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
EA E MIS+ P + + +L FC + + E+F +
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 6/263 (2%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K N ++ +I G+L E + ++M + S + ++S IN + +DEA
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+F+ + +C ++NTL++ R++ LF + S V + V L++
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIH 439
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
D A +F++M G P+ +Y+IL+ GLC++G++ A +F + +
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA----LVVFEYLQRS 495
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
DI Y +++ +C+ GK E+ ++ + KG+K Y + C G E
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK-EE 554
Query: 280 TKRLIHEALIKGSVPSLSSYNAM 302
L E +G +P +YN +
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTL 577
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 196/461 (42%), Gaps = 43/461 (9%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
Y + + T+I L + E ++++M Q C+ + +N G D A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
L +++EAA ++++ V N ++ +
Sbjct: 246 NLL-------------------------NKMEAA-----------KIEADVVIFNTIIDS 269
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
LC D AL +F+EM+ +G PN +Y+ L+ LC GR +A+ LL M I +K
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM---IEKKI 326
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
N ++V + L+DA ++GKF EA ++ ++++ + YN L C R ++
Sbjct: 327 N-PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR-LDKA 384
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
K++ + K P + +YN + ++++ ++ EM RG + +
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
L D A KV ++ MV+ P+ Y+ILL L N G LE + M K
Sbjct: 445 LFHDGDCDNAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIK 502
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
D Y ++E +C+ + + L +S+K P +YN++I GLCS EA
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 461 LEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
L+ M G LP + +L AS+E+ +RS
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 197/455 (43%), Gaps = 73/455 (16%)
Query: 96 VDEAITLF---------KNIPQFN----CVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNS 142
+D+AI LF +I +FN + + F+ ++ + RLE HGL+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY---- 121
Query: 143 CGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRL 202
N+L+ C + + LAL + +M G P+ + + L+ G CH R+
Sbjct: 122 ----------TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 203 HEA-------------------THLLYSMFW------------RISQKGNGEDIVVYRTL 231
+A T L++ +F R+ Q+G ++V Y +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 232 LDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG 291
++ LC+ G + A+ +L+K+ ++A +N + S C R ++ L E KG
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK-YRHVDDALNLFKEMETKG 290
Query: 292 SVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAI 351
P++ +Y+++ L S + +A +++ +M ++ P F A + A K + EA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 352 KVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKV------GCTADRET 405
K + +DM+ + P+ YN L+ N + + L+K + C D T
Sbjct: 351 K-LYDDMIKRSIDPDIFTYNSLV-------NGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
Y L++ C+ +R + ++L +MS + +Y +LI+GL G A + M+
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 466 SQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
S G P+I + L CN ++ + E+F+ ++
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 22/271 (8%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K N + +I G+ E + + M + S + + S +N + +D+A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+F+ + +C ++NTL++ R+E LF + S V V L+
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV-TYTTLIQ 443
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
L G D A ++F++M G P+ +Y+IL+ GLC++G+L +A + M QK
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-----QK 498
Query: 220 GNGE-DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
+ DI +Y T+++ +C+ GK ++ ++ + KG+K YN + CS
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS------ 552
Query: 279 GTKRLIHE--ALIK-----GSVPSLSSYNAM 302
KRL+ E AL+K G +P+ +YN +
Sbjct: 553 --KRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 2/176 (1%)
Query: 309 ESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSE 368
+ K+D+A + M P+ F ++A+ K+ + D I + E M + +
Sbjct: 63 DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVIS-LGEKMQRLEIVHGLY 121
Query: 369 VYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQ 428
YNIL+ + L L KM K+G T LL C +R +A L++Q
Sbjct: 122 TYNILINCFCRRSQISLALALLGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 429 MSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
M Y P ++ +LI GL + EAV ++ M+ +G P + + + + C
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 128/577 (22%), Positives = 227/577 (39%), Gaps = 92/577 (15%)
Query: 9 LTPTYLSQIIRTQKNPMKALHIF-NEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDV 67
L P + +++ +N + F ++ +P + H + MI IL SGRL + +
Sbjct: 76 LNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSC 135
Query: 68 IEQMRQDS-----------------CECKDTVFASAINIYANAGLVDEAITLFKNIPQFN 110
+ +M + S C D+VF I Y A + EA F +
Sbjct: 136 LLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKG 195
Query: 111 CVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLA 170
+ N L+ +V +E A G++ + S V V+ LN+++ ALC G+ +
Sbjct: 196 FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG-VGINVYTLNIMVNALCKDGKMEKV 254
Query: 171 LQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRT 230
++ +G YP+ +Y L+ G + EA L+ +M KG + Y T
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM----PGKGFSPGVYTYNT 310
Query: 231 LLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIK 290
+++ LC+ GK+E A E+ +++LR GL Y L + C G D+ T+++ + +
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG-DVVETEKVFSDMRSR 369
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
VP L +++M +D+A +++ G P I+ + C+ + A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 351 IKVIEE--------DMVAVNCL--------------------------PNSEVYNILLKN 376
+ + E D+V N + P+S IL+
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 377 LRNVGNSAAVLESLNKMSKK---------------VGCTADRET---------------- 405
+GN +E KM +K G D +T
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 406 ---YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLE 462
Y IL+ LC + EA ++ ++M K+ P NS+IKG C G + +LE
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 463 DMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
MIS+G +P+ + +L F E M + + ++
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 201/485 (41%), Gaps = 43/485 (8%)
Query: 51 MISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFN 110
M++ L G++ ++ + Q+++ + + I+ Y++ GL++EA L +P
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 111 CVNWTQSFNTLLQIMVSEDRLEAAHGLFVD--------NSCGW----------------- 145
++NT++ + + E A +F + +S +
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 146 ----EVKSRVHALNL-----LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGL 196
+++SR +L +M G D AL F + G P+ Y IL++G
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 197 CHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
C G + A +L M Q+G D+V Y T+L LC+ EA ++ +++ + L
Sbjct: 421 CRKGMISVAMNLRNEML----QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 257 KAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEAD 316
L C G +++ L + K + +YN + ID A
Sbjct: 477 FPDSYTLTILIDGHCKLG-NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 317 KVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKN 376
++ +M + PT + V ALC + EA +V +E M++ N P + N ++K
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE-MISKNIKPTVMICNSMIKG 594
Query: 377 LRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK--SY 434
GN++ L KM + G D +Y L+ RE +A L+++M +
Sbjct: 595 YCRSGNASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 435 WPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSE 494
P +YNS++ G C + EA + L MI +G P+ S + + + F + + + +
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 495 IFNRL 499
I + +
Sbjct: 714 IHDEM 718
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 22/386 (5%)
Query: 59 GRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSF 118
G + E V MR F+S ++++ +G +D+A+ F ++ + + +
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 119 NTLLQIMVSEDRLEAAHGL---FVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQ 175
L+Q + + A L + C +V + N +++ LC + A ++F
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT----YNTILHGLCKRKMLGEADKLFN 469
Query: 176 EMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDAL 235
EM + +P+ + IL+ G C G L A L F ++ +K D+V Y TLLD
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMEL----FQKMKEKRIRLDVVTYNTLLDGF 525
Query: 236 CEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPS 295
+ G + A EI + ++ K + Y+ L + CS G E R+ E + K P+
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF-RVWDEMISKNIKPT 584
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA---IK 352
+ N+M + + + +M GF P + + + + +A +K
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 353 VIEEDMVAVNCLPNSEVYNILLKNL--RNVGNSAAVLESLNKMSKKVGCTADRETYIILL 410
+EE+ + +P+ YN +L +N A V+ L KM ++ G DR TY ++
Sbjct: 645 KMEEEQGGL--VPDVFTYNSILHGFCRQNQMKEAEVV--LRKMIER-GVNPDRSTYTCMI 699
Query: 411 EMLCRERRYLEASQLLEQMSIKSYWP 436
+ EA ++ ++M + + P
Sbjct: 700 NGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 116/285 (40%), Gaps = 8/285 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y T++ L LGE + +M + + I+ + G + A+ LF+ +
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ ++NTLL ++ A ++ D E+ + ++L+ ALC KG
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD-MVSKEILPTPISYSILVNALCSKGH 565
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
A +++ EM + P ++KG C G + L M +G D +
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI----SEGFVPDCI 621
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRK--GLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
Y TL+ + +A ++ K+ + GL YN + C + ++ + ++
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ-MKEAEVVL 680
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKP 329
+ + +G P S+Y M S+ + EA ++ EM RGF P
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 18/286 (6%)
Query: 231 LLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLD--LSQCSDGRDI---------EG 279
++ L G+ +A L +++R+ + N LD S C + +
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQA 178
Query: 280 TK-RLIHEALI----KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
K R HEA KG S+ + NA+ L ++ A V E+ G
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
V ALCK ++ E + + P+ YN L+ + G E +N M
Sbjct: 239 NIMVNALCKDGKM-EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
K G + TY ++ LC+ +Y A ++ +M P + +Y SL+ C G
Sbjct: 298 GK-GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
E DM S+ +P++ + S+ SLF + + FN ++
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 122/555 (21%), Positives = 228/555 (41%), Gaps = 90/555 (16%)
Query: 9 LTPTYLSQI-IRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDV 67
L P ++ ++ + +++P A F + +R + H+ Y + IL + + V
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTR-NGFKHSVESYCIVAHILFCARMYYDANSV 164
Query: 68 IEQM--RQDSCECKDT-------------VFASAINIYANAGLVDEAITLFKNIPQFNCV 112
+++M + C+ D VF + ++ + G+++EAI F + +F
Sbjct: 165 LKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVF 224
Query: 113 NWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQ 172
T+S N LL + + F D G + V N+++ +C +G + A
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKD-MIGAGARPTVFTYNIMIDCMCKEGDVEAARG 283
Query: 173 IFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM-------------------- 212
+F+EM ++G P+ +Y ++ G GRL + M
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 343
Query: 213 ----------FWRISQKGNG--EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPK 260
F+R KGNG ++V Y TL+DA C++G ++AI+ + R GL +
Sbjct: 344 KFGKLPIGLEFYR-EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 402
Query: 261 RCYNRLDLSQCSDGRDIEGTKRLIHEAL-------------------------------- 288
Y L + C G ++ RL +E L
Sbjct: 403 YTYTSLIDANCKIG-NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFG 461
Query: 289 ---IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
G +P+L+SYNA+ +D A +++ E++ RG KP ++ + LC +
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
++ EA KV+ +M NS +Y L+ GN L L++M K++ T
Sbjct: 522 KI-EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM-KELDIEVTVVT 579
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIK-SYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
+ +L++ LC+ + +A ++S A + ++I GLC + A E M
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 465 ISQGKLPEISVWKSL 479
+ +G +P+ + + SL
Sbjct: 640 VQKGLVPDRTAYTSL 654
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 2/173 (1%)
Query: 329 PTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLE 388
P +F+A + L + ++EAI+ + M P + N LL +G + V
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSK-MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 389 SLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGL 448
M G TY I+++ +C+E A L E+M + P +YNS+I G
Sbjct: 249 FFKDMIG-AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 449 CSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
+GR + V + E+M P++ + +L + FC + E + ++
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 148/363 (40%), Gaps = 11/363 (3%)
Query: 46 PVYATMISILGTSGRLGEMRDVI---EQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
P T S++ + ++G + D +M Q E + + I+ +A + EA L
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
F + + S+N L+ V ++ A L ++ G +K + ++ LC
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL-LNELKGRGIKPDLLLYGTFIWGLC 518
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
+ + A + EM G N Y LM G E HLL M +
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM----KELDIE 574
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRK-GLKAPKRCYNRLDLSQCSDGRDIEGTK 281
+V + L+D LC++ +A++ ++I GL+A + + C D + +E
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ-VEAAT 633
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
L + + KG VP ++Y ++ + + + EA + +M + G K + + V L
Sbjct: 634 TLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
+++ +A +EE M+ P+ + +LK +G +E + + K T+
Sbjct: 694 SHCNQLQKARSFLEE-MIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS 752
Query: 402 DRE 404
D +
Sbjct: 753 DND 755
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 105/235 (44%), Gaps = 6/235 (2%)
Query: 22 KNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDT 81
KN +AL + NE K R K + +Y T I L + ++ + V+ +M++ +
Sbjct: 486 KNMDRALELLNELKGRGIK--PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN 141
++ + ++ Y +G E + L + + + +F L+ + + A F
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
S + +++ ++ LC + + A +F++M +G P+R +Y LM G G
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
+ EA L M ++ G D++ Y +L+ L + ++A L +++ +G+
Sbjct: 664 VLEALALRDKM----AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 192/442 (43%), Gaps = 59/442 (13%)
Query: 73 QDSCECKDTV----------FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLL 122
Q CE D V F +AIN + G V+EA+ LF + + +FNT++
Sbjct: 243 QKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVI 302
Query: 123 QIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGC 182
GL +CG R D A ++M +G
Sbjct: 303 D------------GL----------------------GMCG--RYDEAFMFKEKMVERGM 326
Query: 183 YPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFE 242
P +Y+IL+KGL R+ +A +L M ++KG +++VY L+D+ E G
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEM----TKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 243 EAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAM 302
+AIEI ++ KGL YN L C +G+ + +RL+ E L G + S+ ++
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ-ADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 303 AVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVN 362
L S D A + + EM R P + ++ LCK + +A+++ + +
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ-FLNKG 500
Query: 363 CLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKV---GCTADRETYIILLEMLCRERRY 419
+ ++ N LL L G L+ ++ K++ GC DR +Y L+ C +++
Sbjct: 501 FVVDTRTSNALLHGLCEAGK----LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 420 LEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
EA L++M + P +Y+ LI GL ++ + EA+ + +D G LP++ + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 480 ASLFCNLEMMKASSEIFNRLRS 501
C E + E F+ + S
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMS 638
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 204/456 (44%), Gaps = 12/456 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y+ ++ L + R+G+ V+++M + V+ + I+ + AG +++AI + K++
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDL 390
Query: 107 PQFNCVNWTQS-FNTLLQIMVSEDRLEAAHGLFVDN-SCGWEVKSRVHALNLLMYALCGK 164
++ T S +NTL++ + + A L + S G+ V + ++ LC
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ--GSFTSVICLLCSH 448
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
D AL+ EM + P L+ GLC G+ +A L +++ KG D
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL----WFQFLNKGFVVD 504
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
LL LCE GK +EA I +IL +G + YN L +S C + ++ +
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL-ISGCCGKKKLDEAFMFL 563
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
E + +G P +Y+ + L++ +K++EA + + + G P + + CK
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
R +E + +E M++ N PN+ VYN L++ G + LE M K G + +
Sbjct: 624 ERTEEGQEFFDE-MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK-GISPNSA 681
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
TY L++ + R EA L E+M ++ P Y +LI G LG+ + L +M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 465 ISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
S+ P + + + + +S + N +R
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 188/449 (41%), Gaps = 14/449 (3%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N + T+I LG GR E E+M + E ++ + A + +A +
Sbjct: 294 NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL 353
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAA---HGLFVDNSCGWEVKSRVHALNLLMYA 160
K + + +N L+ + L A L V S G + S + N L+
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV--SKGLSLTSSTY--NTLIKG 409
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
C G++D A ++ +EM G N+ S+ ++ LC A + M R G
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
G + TL+ LC+ GK +A+E+ + L KG R N L C G+ ++
Sbjct: 470 GG----LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK-LDEA 524
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
R+ E L +G V SYN + + K+DEA + EM RG KP + +
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
L +++V+EAI+ +D LP+ Y++++ + E ++M K
Sbjct: 585 LFNMNKVEEAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQ 642
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
+ Y L+ CR R A +L E M K P + +Y SLIKG+ + R EA +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 461 LEDMISQGKLPEISVWKSLASLFCNLEMM 489
E+M +G P + + +L + L M
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 169/412 (41%), Gaps = 10/412 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y T+I +G+ ++++M F S I + + + D A+ +
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL-FVDNSCGWEVKSRVHALNLLMYALCGKG 165
N TL+ + + A L F + G+ V +R N L++ LC G
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS--NALLHGLCEAG 519
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
+ D A +I +E+ +GC +R SY L+ G C +L EA L M R G D
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR----GLKPDN 575
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
Y L+ L K EEAI+ R G+ Y+ + C R EG +
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG-QEFFD 634
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
E + K P+ YN + ++ A ++ +M+ +G P A + + + + +S
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
RV+EA K++ E+M PN Y L+ +G V L +M K ++ T
Sbjct: 695 RVEEA-KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK-NVHPNKIT 752
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEA 457
Y +++ R+ EAS+LL +M K P + +Y I G G EA
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 164/355 (46%), Gaps = 23/355 (6%)
Query: 155 NLLMYALCGKGRSD---LALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYS 211
+LL+ C + + D LAL +F + +G +P++ + IL+ L +
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEA--- 248
Query: 212 MFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL--DLS 269
+ + KG D+ ++ T ++A C+ GK EEA+++ SK+ G+ +N + L
Sbjct: 249 --FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG 306
Query: 270 QCSDGRDIEGTKRLIHEALI-KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFK 328
C GR E + E ++ +G P+L +Y+ + L +I +A V+ EM +GF
Sbjct: 307 MC--GRYDEAF--MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP 362
Query: 329 PTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLE 388
P ++ + + + +++AI+ I++ MV+ S YN L+K G A E
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIE-IKDLMVSKGLSLTSSTYNTLIKGYCKNGQ-ADNAE 420
Query: 389 SLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGL 448
L K +G ++ ++ ++ +LC + A + + +M +++ P +LI GL
Sbjct: 421 RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 449 CSLGRQYEAV-MWLEDMISQGKLPEISVWKSLASLFCNL----EMMKASSEIFNR 498
C G+ +A+ +W + +++G + + +L C E + EI R
Sbjct: 481 CKHGKHSKALELWFQ-FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 192/442 (43%), Gaps = 59/442 (13%)
Query: 73 QDSCECKDTV----------FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLL 122
Q CE D V F +AIN + G V+EA+ LF + + +FNT++
Sbjct: 243 QKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVI 302
Query: 123 QIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGC 182
GL +CG R D A ++M +G
Sbjct: 303 D------------GL----------------------GMCG--RYDEAFMFKEKMVERGM 326
Query: 183 YPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFE 242
P +Y+IL+KGL R+ +A +L M ++KG +++VY L+D+ E G
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEM----TKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 243 EAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAM 302
+AIEI ++ KGL YN L C +G+ + +RL+ E L G + S+ ++
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ-ADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 303 AVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVN 362
L S D A + + EM R P + ++ LCK + +A+++ + +
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ-FLNKG 500
Query: 363 CLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKV---GCTADRETYIILLEMLCRERRY 419
+ ++ N LL L G L+ ++ K++ GC DR +Y L+ C +++
Sbjct: 501 FVVDTRTSNALLHGLCEAGK----LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 420 LEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
EA L++M + P +Y+ LI GL ++ + EA+ + +D G LP++ + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 480 ASLFCNLEMMKASSEIFNRLRS 501
C E + E F+ + S
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMS 638
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 204/456 (44%), Gaps = 12/456 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y+ ++ L + R+G+ V+++M + V+ + I+ + AG +++AI + K++
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDL 390
Query: 107 PQFNCVNWTQS-FNTLLQIMVSEDRLEAAHGLFVDN-SCGWEVKSRVHALNLLMYALCGK 164
++ T S +NTL++ + + A L + S G+ V + ++ LC
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ--GSFTSVICLLCSH 448
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
D AL+ EM + P L+ GLC G+ +A L +++ KG D
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL----WFQFLNKGFVVD 504
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
LL LCE GK +EA I +IL +G + YN L +S C + ++ +
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL-ISGCCGKKKLDEAFMFL 563
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
E + +G P +Y+ + L++ +K++EA + + + G P + + CK
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
R +E + +E M++ N PN+ VYN L++ G + LE M K G + +
Sbjct: 624 ERTEEGQEFFDE-MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK-GISPNSA 681
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
TY L++ + R EA L E+M ++ P Y +LI G LG+ + L +M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 465 ISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
S+ P + + + + +S + N +R
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 188/449 (41%), Gaps = 14/449 (3%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N + T+I LG GR E E+M + E ++ + A + +A +
Sbjct: 294 NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL 353
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAA---HGLFVDNSCGWEVKSRVHALNLLMYA 160
K + + +N L+ + L A L V S G + S + N L+
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV--SKGLSLTSSTY--NTLIKG 409
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
C G++D A ++ +EM G N+ S+ ++ LC A + M R G
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
G + TL+ LC+ GK +A+E+ + L KG R N L C G+ ++
Sbjct: 470 GG----LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK-LDEA 524
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
R+ E L +G V SYN + + K+DEA + EM RG KP + +
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
L +++V+EAI+ +D LP+ Y++++ + E ++M K
Sbjct: 585 LFNMNKVEEAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQ 642
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
+ Y L+ CR R A +L E M K P + +Y SLIKG+ + R EA +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 461 LEDMISQGKLPEISVWKSLASLFCNLEMM 489
E+M +G P + + +L + L M
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 169/412 (41%), Gaps = 10/412 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y T+I +G+ ++++M F S I + + + D A+ +
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL-FVDNSCGWEVKSRVHALNLLMYALCGKG 165
N TL+ + + A L F + G+ V +R N L++ LC G
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS--NALLHGLCEAG 519
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
+ D A +I +E+ +GC +R SY L+ G C +L EA L M R G D
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR----GLKPDN 575
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
Y L+ L K EEAI+ R G+ Y+ + C R EG +
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG-QEFFD 634
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
E + K P+ YN + ++ A ++ +M+ +G P A + + + + +S
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
RV+EA K++ E+M PN Y L+ +G V L +M K ++ T
Sbjct: 695 RVEEA-KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK-NVHPNKIT 752
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEA 457
Y +++ R+ EAS+LL +M K P + +Y I G G EA
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 164/355 (46%), Gaps = 23/355 (6%)
Query: 155 NLLMYALCGKGRSD---LALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYS 211
+LL+ C + + D LAL +F + +G +P++ + IL+ L +
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEA--- 248
Query: 212 MFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL--DLS 269
+ + KG D+ ++ T ++A C+ GK EEA+++ SK+ G+ +N + L
Sbjct: 249 --FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG 306
Query: 270 QCSDGRDIEGTKRLIHEALI-KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFK 328
C GR E + E ++ +G P+L +Y+ + L +I +A V+ EM +GF
Sbjct: 307 MC--GRYDEAF--MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP 362
Query: 329 PTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLE 388
P ++ + + + +++AI+ I++ MV+ S YN L+K G A E
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIE-IKDLMVSKGLSLTSSTYNTLIKGYCKNGQ-ADNAE 420
Query: 389 SLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGL 448
L K +G ++ ++ ++ +LC + A + + +M +++ P +LI GL
Sbjct: 421 RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 449 CSLGRQYEAV-MWLEDMISQGKLPEISVWKSLASLFCNL----EMMKASSEIFNR 498
C G+ +A+ +W + +++G + + +L C E + EI R
Sbjct: 481 CKHGKHSKALELWFQ-FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 175/382 (45%), Gaps = 8/382 (2%)
Query: 115 TQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIF 174
T +F+TL+ + E R+ A L VD K + LN L+ LC G+ A+ +
Sbjct: 142 TVTFSTLINGLCLEGRVSEALEL-VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 175 QEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDA 234
M G PN +Y ++K +C G+ A LL M R + D V Y ++D
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL----DAVKYSIIIDG 256
Query: 235 LCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP 294
LC+DG + A + +++ KG KA Y L C GR +G K L+ + + + P
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK-LLRDMIKRKITP 315
Query: 295 SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVI 354
+ +++A+ E K+ EA+++ EM RG P + + + CK +++D+A ++
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 355 EEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLC 414
+ MV+ C PN +NIL+ LE KMS + G AD TY L++ C
Sbjct: 376 DL-MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLIQGFC 433
Query: 415 RERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEIS 474
+ A +L ++M + P SY L+ GLC G +A+ E + +I
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 475 VWKSLASLFCNLEMMKASSEIF 496
++ + CN + + ++F
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLF 515
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 190/433 (43%), Gaps = 12/433 (2%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
Y + ++T+I+ L GR+ E +++++M + + + +N G V +A+
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHAL--NLLM 158
L + + ++ +L++M + A L E K ++ A+ ++++
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME---ERKIKLDAVKYSIII 254
Query: 159 YALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQ 218
LC G D A +F EM+ +G + Y L++G C+ GR + LL M R
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 219 KGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
D+V + L+D ++GK EA E+ +++++G+ Y L C + + ++
Sbjct: 315 ----PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ-LD 369
Query: 279 GTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKV 338
++ + KG P++ ++N + + ID+ ++ +M RG + +
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 339 AALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVG 398
C++ +++ A ++ +E MV+ P+ Y ILL L + G LE K+ K
Sbjct: 430 QGFCELGKLEVAKELFQE-MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS-K 487
Query: 399 CTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAV 458
D Y I++ +C + +A L + +K P +YN +I GLC G EA
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 459 MWLEDMISQGKLP 471
+ M G P
Sbjct: 548 LLFRKMEEDGHSP 560
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 154/333 (46%), Gaps = 14/333 (4%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
A ++FNE + + + + +Y T+I +GR + ++ M + F++
Sbjct: 266 AFNLFNEMEIK--GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAH---GLFVDNSC 143
I+ + G + EA L K + Q T ++ +L+ E++L+ A+ L V C
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH 203
G +++ N+L+ C D L++F++M +G + +Y L++G C G+L
Sbjct: 384 GPNIRT----FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 204 EATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
A L M R + DIV Y+ LLD LC++G+ E+A+EI KI + ++ Y
Sbjct: 440 VAKELFQEMVSRRVR----PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
N + C+ + ++ L +KG P + +YN M L + + EAD + +M+
Sbjct: 496 NIIIHGMCNASK-VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+ G P + + A ++ K+IEE
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 184/414 (44%), Gaps = 26/414 (6%)
Query: 97 DEAITLFKNI----PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVH 152
D+A+ LF+ + P+ +++++ F+ + + + L +D E+K H
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVART--------KQYDLVLDLCKQMELKGIAH 105
Query: 153 ---ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLL 209
L++++ C + LA ++ G P+ +++ L+ GLC +GR+ EA L+
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 210 YSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLS 269
R+ + G+ ++ L++ LC +GK +A+ ++ +++ G + + Y +
Sbjct: 166 D----RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 270 QCSDGRDIEGTK--RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
C G+ + R + E IK Y+ + L + +D A + EM+ +GF
Sbjct: 222 MCKSGQTALAMELLRKMEERKIK---LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 328 KPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVL 387
K I+ + C R D+ K++ DM+ P+ ++ L+ G
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLR-DMIKRKITPDVVAFSALIDCFVKEGKLREA- 336
Query: 388 ESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKG 447
E L+K + G + D TY L++ C+E + +A+ +L+ M K P ++N LI G
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 448 LCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
C + + M +G + + + +L FC L ++ + E+F + S
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 9/269 (3%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y ++I +L + +++ M C F IN Y A L+D+ + LF+ +
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS 167
V T ++NTL+Q +LE A LF V+ + + +L+ LC G
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELF-QEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVV 227
+ AL+IF++++ + Y I++ G+C+ ++ +A + +F + KG D+
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA----WDLFCSLPLKGVKPDVKT 529
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC-YNRLDLSQCSDGRDIEGTKRLIHE 286
Y ++ LC+ G EA + K+ G +P C YN L + +G D + +LI E
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDG-HSPNGCTYNILIRAHLGEG-DATKSAKLIEE 587
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEA 315
G S+ M VD+ S+ ++ ++
Sbjct: 588 IKRCGFSVDASTVK-MVVDMLSDGRLKKS 615
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 204/462 (44%), Gaps = 28/462 (6%)
Query: 51 MISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFN 110
M+ L G+L EM V + M++ + + + + G + +A + + +F
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 111 CVNWTQSFNTLLQIMVSE----DRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
V S+N L+ +++ + +E + ++ + + + LM L +
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG-----FRPSLQTYSSLMVGLGKRRD 238
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
D + + +EM+ G PN ++ I ++ L G+++EA Y + R+ +G G D+V
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA----YEILKRMDDEGCGPDVV 294
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y L+DALC K + A E+ K ++ G P R L + SD RD++ K+ E
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEK-MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
G VP + ++ + L EA + M+D+G P + + L +V R
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK------VGCT 400
+D+A+++ +M ++ P + Y + + G+S + LE+ KM K V C
Sbjct: 414 LDDALELFG-NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
A L L + R EA Q+ + P + +YN ++K +G EA+
Sbjct: 473 AS-------LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 461 LEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRSL 502
L +M+ G P++ V SL + + + + ++F R++ +
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 187/494 (37%), Gaps = 50/494 (10%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y M+ G + E ++ +M ++ CE V S IN A VDEA +F +
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSCGWEVKSRVHALNLLMYALCG 163
+ ++NTLL + +++ A LF V C N L LC
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC----PPNTITFNTLFDCLCK 620
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
LAL++ +M GC P+ +Y ++ GL +G++ EA + M +K
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-----KKLVYP 675
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY---------------NRLDL 268
D V TLL + + E+A +I++ L P + N +
Sbjct: 676 DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSF 735
Query: 269 SQ-------CSDGRDI-------------EGTKRLIHEALIK--GSVPSLSSYNAMAVDL 306
S+ C DG I R + E K G P L +YN + L
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 307 YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPN 366
I+ A V ++++ G P A + + A K ++DE ++ +E M C N
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE-MSTHECEAN 854
Query: 367 SEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLL 426
+ +NI++ L GN L+ + + TY L++ L + R EA QL
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 427 EQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNL 486
E M P YN LI G G A + M+ +G P++ + L C +
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 487 EMMKASSEIFNRLR 500
+ F L+
Sbjct: 975 GRVDEGLHYFKELK 988
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/521 (22%), Positives = 216/521 (41%), Gaps = 67/521 (12%)
Query: 10 TPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIE 69
T Y+ + +R + ++F+ + R K N Y T+ L G L + +
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTN--TYLTIFKSLSVKGGLKQAPYALR 177
Query: 70 QMRQDSCECKDTVFASAINIYANAGLVD---------EAITLFKNIPQFNCVNWTQSFNT 120
+MR+ F +N Y+ GL+ EA+ +++ + Q++++
Sbjct: 178 KMRE---------FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSS 228
Query: 121 LLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQ 180
L+ + +++ GL + +K V+ + + L G+ + A +I + MD +
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMET-LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE 287
Query: 181 GCYPNRDSYAILMKGLCHDGRLHEATHLLYSM---------------------------- 212
GC P+ +Y +L+ LC +L A + M
Sbjct: 288 GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSV 347
Query: 213 --FW-RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL--- 266
FW + + G+ D+V + L+DALC+ G F EA + L + +G+ YN L
Sbjct: 348 KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG 407
Query: 267 --DLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKID-EADKVIVEMQ 323
+ + D ++ G E+L G P+ +Y + +D Y +S A + +M+
Sbjct: 408 LLRVHRLDDALELFGN----MESL--GVKPTAYTY-IVFIDYYGKSGDSVSALETFEKMK 460
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
+G P A + +L K R EA K I + + +P+S YN+++K VG
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREA-KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 384 AAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS 443
++ L++M + GC D L+ L + R EA ++ +M P +YN+
Sbjct: 520 DEAIKLLSEMMEN-GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 444 LIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
L+ GL G+ EA+ E M+ +G P + +L C
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 147/347 (42%), Gaps = 13/347 (3%)
Query: 34 AKSRYPKYTHNG------PVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAI 87
A++ + K+T + P Y +I L + + +DV Q++ C + +
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 88 NIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEV 147
+ Y +G +DE L+K + C T + N ++ +V ++ A L+ D +
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 148 KSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATH 207
L+ L GR A Q+F+ M GC PN Y IL+ G G A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC- 946
Query: 208 LLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLD 267
++F R+ ++G D+ Y L+D LC G+ +E + ++ GL CYN L
Sbjct: 947 ---ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN-LI 1002
Query: 268 LSQCSDGRDIEGTKRLIHEALI-KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRG 326
++ +E L +E +G P L +YN++ ++L ++EA K+ E+Q G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 327 FKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNIL 373
+P F A + + + A V + MV PN+ Y L
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQT-MVTGGFSPNTGTYEQL 1108
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 175/433 (40%), Gaps = 36/433 (8%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+ I +LG +G++ E +++++M + C + I+ A +D A +F+ +
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
++ TLL L++ + + V V +L+ ALC G
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV-TFTILVDALCKAGN 378
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM-------------- 212
A M QG PN +Y L+ GL RL +A L +M
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438
Query: 213 -----------------FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKG 255
F ++ KG +IV L +L + G+ EA +I + G
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 256 LKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEA 315
L YN + + S +I+ +L+ E + G P + N++ LY ++DEA
Sbjct: 499 LVPDSVTYNMM-MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 316 DKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLK 375
K+ + M++ KPT + +A L K ++ EAI++ E MV C PN+ +N L
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF-EGMVQKGCPPNTITFNTLFD 616
Query: 376 NLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYW 435
L L+ L KM +GC D TY ++ L + + EA QM K +
Sbjct: 617 CLCKNDEVTLALKMLFKM-MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVY 674
Query: 436 PCADSYNSLIKGL 448
P + +L+ G+
Sbjct: 675 PDFVTLCTLLPGV 687
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 161/396 (40%), Gaps = 9/396 (2%)
Query: 88 NIYANAGLVDEAITLFKN-IPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWE 146
+I A AG +D A++ + + C + +++ + + A LF +
Sbjct: 722 SILAEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG 780
Query: 147 VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEAT 206
V+ ++ NLL+ L ++A +F ++ GC P+ +Y L+ G++ E
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE-- 838
Query: 207 HLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC-YNR 265
L+ ++ +S + + + ++ L + G ++A+++ ++ +P C Y
Sbjct: 839 --LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 266 LDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDR 325
L GR E K+L L G P+ + YN + + D A + M
Sbjct: 897 LIDGLSKSGRLYEA-KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 326 GFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAA 385
G +P + V LC V RVDE + +E + P+ YN+++ L
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE-LKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 386 VLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
L N+M G T D TY L+ L EA ++ ++ P ++N+LI
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Query: 446 KGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLAS 481
+G G+ A + M++ G P ++ L +
Sbjct: 1075 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 186/467 (39%), Gaps = 52/467 (11%)
Query: 23 NPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTV 82
N AL +F + S+ N Y+ +I L GRL E + +QM + C+
Sbjct: 245 NLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 83 FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNS 142
+ I + GL+D+A LF + C ++ L+ + + ++E A+G+
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV----- 358
Query: 143 CGWEVKSRVH----ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
C VK R+ N L+ C GR A ++ M+ + C PN ++ LM+GLC
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 199 DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA 258
G+ ++A HLL M G DIV Y L+D LC +G A ++LS +
Sbjct: 419 VGKPYKAVHLLKRML----DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM------- 467
Query: 259 PKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKV 318
C+ DIE P ++ A+ + K D A
Sbjct: 468 --NCF------------DIE---------------PDCLTFTAIINAFCKQGKADVASAF 498
Query: 319 IVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLR 378
+ M +G + +CKV + +A+ ++E +V + L N++L L
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET-LVKMRILTTPHSLNVILDMLS 557
Query: 379 NVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCA 438
L L K++ K+G TY L++ L R + ++LE M + P
Sbjct: 558 KGCKVKEELAMLGKIN-KLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 439 DSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCN 485
Y +I GLC GR EA L M G P + + + N
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 178/398 (44%), Gaps = 39/398 (9%)
Query: 111 CVNWTQSFNTLLQIMVSEDRLEAAHGLFVD--NSCGWEVKSRVHALNLLMYALCGKGRSD 168
C + TQ N LL+++VS AH + V C K + LMY D
Sbjct: 100 CFDPTQK-NQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLK----LMYCF------D 148
Query: 169 LALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVY 228
++F ++ YP S + + L + L Y + R+ G ++ Y
Sbjct: 149 ELREVF---GFRLNYPCYSSLLMSLAKL-------DLGFLAYVTYRRMEADGFVVGMIDY 198
Query: 229 RTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
RT+++ALC++G E A +SKIL+ G L L C G ++ + + + +
Sbjct: 199 RTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR-GLNLRDALK-VFDVM 256
Query: 289 IK--GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
K P+ SY+ + L +++EA + +M ++G +P+ + + ALC
Sbjct: 257 SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADR--- 403
+D+A + +E M+ C PN Y +L+ L G +E N + +K+ DR
Sbjct: 317 IDKAFNLFDE-MIPRGCKPNVHTYTVLIDGLCRDGK----IEEANGVCRKM--VKDRIFP 369
Query: 404 --ETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
TY L+ C++ R + A +LL M ++ P ++N L++GLC +G+ Y+AV L
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
Query: 462 EDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+ M+ G P+I + L C M + ++ + +
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 153/324 (47%), Gaps = 11/324 (3%)
Query: 9 LTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVI 68
L P + +I K+P L + R Y +YA MI+ G + E+ +V+
Sbjct: 60 LAPNEVLKIFDNVKDPSFLLPAYQHYSKR-KDYQPTESLYALMINKFGQAKMYDEIEEVM 118
Query: 69 EQMR-QDSCECKDTVFASAINIYAN-AGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
++ + C + F + + IY N AG ++ AI + +P F C ++SFN +L ++V
Sbjct: 119 RTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLV 178
Query: 127 SEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN 185
S + H +FV G E+ + LN+L+ LC G + ALQ+ E Q PN
Sbjct: 179 SAKLFDEIHKIFVSAPKLGVEIDA--CCLNILIKGLCESGNLEAALQLLDEFPQQKSRPN 236
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAI 245
+++ L++G C+ G+ EA LL R+ ++ D + + L+ L + G+ EE I
Sbjct: 237 VMTFSPLIRGFCNKGKFEEAFKLLE----RMEKERIEPDTITFNILISGLRKKGRVEEGI 292
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVD 305
++L ++ KG + Y + R++E K ++ + + G PS SY M +
Sbjct: 293 DLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA-KEMMSQMISWGMRPSFLSYKKMVLG 351
Query: 306 LYSESKIDEADKVIVEMQDRGFKP 329
L + E D V+ +M + GF P
Sbjct: 352 LCETKSVVEMDWVLRQMVNHGFVP 375
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 3/238 (1%)
Query: 239 GKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSS 298
G+ AIEIL + G + +N + L+ + + ++ A G
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFI-LNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 299 YNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDM 358
N + L ++ A +++ E + +P F + C + +EA K++E M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLER-M 263
Query: 359 VAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERR 418
P++ +NIL+ LR G ++ L +M K GC + TY +L L ++R
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVK-GCEPNPGTYQEVLYGLLDKKR 322
Query: 419 YLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVW 476
LEA +++ QM P SY ++ GLC E L M++ G +P+ +W
Sbjct: 323 NLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 2/194 (1%)
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
G PS S+N + L S DE K+ V G + + LC+ ++ A
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 351 IKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILL 410
+++++E PN ++ L++ N G + L +M K+ D T+ IL+
Sbjct: 222 LQLLDE-FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE-RIEPDTITFNILI 279
Query: 411 EMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL 470
L ++ R E LLE+M +K P +Y ++ GL R EA + MIS G
Sbjct: 280 SGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMR 339
Query: 471 PEISVWKSLASLFC 484
P +K + C
Sbjct: 340 PSFLSYKKMVLGLC 353
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 202/449 (44%), Gaps = 21/449 (4%)
Query: 52 ISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNC 111
S+LG + +LG D I F++ +N + G V EA+ L + +
Sbjct: 125 FSVLGRAWKLGYEPDTI-------------TFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171
Query: 112 VNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLAL 171
+ +TL+ + + R+ A + +D + + ++ LC G S LAL
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEAL-VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 172 QIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTL 231
+F++M+ + + Y+I++ LC DG +A S+F + KG D+V Y +L
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA----LSLFNEMEMKGIKADVVTYSSL 286
Query: 232 LDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG 291
+ LC DGK+++ ++L +++ + + ++ L +G+ +E K L +E + +G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA-KELYNEMITRG 345
Query: 292 SVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAI 351
P +YN++ E+ + EA+++ M +G +P + + + CK RVD+ +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 352 KVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLE 411
++ E + + +PN+ YN L+ G A E +M + G TY ILL+
Sbjct: 406 RLFRE-ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLD 463
Query: 412 MLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLP 471
LC +A ++ E+M YN +I G+C+ + +A + +G P
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 472 EISVWKSLASLFCNLEMMKASSEIFNRLR 500
++ + + C + + +F +++
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 190/439 (43%), Gaps = 22/439 (5%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
Y + ++T+++ GR+ E ++++M + ++ IN G V EA+
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
L + ++ ++ +L + A LF +K+ V ++++ +
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME-ERNIKASVVQYSIVIDS 254
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
LC G D AL +F EM+ +G + +Y+ L+ GLC+DG+ + +L M R
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR----N 310
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
D+V + L+D ++GK EA E+ ++++ +G+ YN L C +
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE------- 363
Query: 281 KRLIHEA-------LIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAI 333
+HEA + KG P + +Y+ + ++D+ ++ E+ +G P
Sbjct: 364 -NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 334 FEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKM 393
+ V C+ +++ A ++ +E MV+ P+ Y ILL L + G LE KM
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQE-MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 394 SKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGR 453
K T Y I++ +C + +A L +S K P +YN +I GLC G
Sbjct: 482 QKS-RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 454 QYEAVMWLEDMISQGKLPE 472
EA M M G P+
Sbjct: 541 LSEADMLFRKMKEDGCTPD 559
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 183/416 (43%), Gaps = 8/416 (1%)
Query: 49 ATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQ 108
+T+I+ L GR+ E +I++M + + + + +N +G A+ LF+ + +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 109 FNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSD 168
N ++ ++ + + + A LF + +K+ V + L+ LC G+ D
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG-IKADVVTYSSLIGGLCNDGKWD 297
Query: 169 LALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVY 228
++ +EM + P+ +++ L+ +G+L EA L M R G D + Y
Sbjct: 298 DGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR----GIAPDTITY 353
Query: 229 RTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
+L+D C++ EA ++ ++ KG + Y+ L S C R +G RL E
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM-RLFREIS 412
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
KG +P+ +YN + + K++ A ++ EM RG P+ + + LC ++
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
+A+++ E+ M +YNI++ + N +S K G D TY +
Sbjct: 473 KALEIFEK-MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK-GVKPDVVTYNV 530
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
++ LC++ EA L +M P +YN LI+ +V +E+M
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 181/412 (43%), Gaps = 20/412 (4%)
Query: 96 VDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSC-GWE---VKSRV 151
V++AI LF+++ Q + FN L + + + G C G E ++ +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGF-----CKGMELNGIEHDM 105
Query: 152 HALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYS 211
+ + +++ C K + A + G P+ +++ L+ G C +GR+ EA L+
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 212 MFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQC 271
M + Q+ D+V TL++ LC G+ EA+ ++ +++ G + + Y + C
Sbjct: 166 MV-EMKQR---PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 221
Query: 272 SDGRDIEGTK--RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKP 329
G R + E IK SV Y+ + L + D+A + EM+ +G K
Sbjct: 222 KSGNSALALDLFRKMEERNIKASV---VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 330 TRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLES 389
+ + + LC + D+ K++ E M+ N +P+ ++ L+ G E
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLRE-MIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 390 LNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLC 449
N+M + G D TY L++ C+E EA+Q+ + M K P +Y+ LI C
Sbjct: 338 YNEMITR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 450 SLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
R + + ++ S+G +P + +L FC + A+ E+F + S
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 178/399 (44%), Gaps = 61/399 (15%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
AL +FNE + + K + Y+++I L G+ + ++ +M + F++
Sbjct: 264 ALSLFNEMEMKGIK--ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSC 143
I+++ G + EA L+ + T ++N+L+ E+ L A+ +F V C
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH 203
+ + ++L+ + C R D +++F+E+ +G PN +Y L+ G C G+L+
Sbjct: 382 ----EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 204 EATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
A L M R G +V Y LLD LC++G+ +A+EI K+ +
Sbjct: 438 AAKELFQEMVSR----GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK---------- 483
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
+R+ L + YN + + + SK+D+A + +
Sbjct: 484 SRMTLG--------------------------IGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 324 DRGFKPTRAIFEAKVAALCK---VSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNV 380
D+G KP + + LCK +S D + ++ED C P+ YNIL++ ++
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED----GCTPDDFTYNILIR--AHL 571
Query: 381 GNSAAV--LESLNKMSKKVGCTADRETYIILLEMLCRER 417
G S + +E + +M K G +AD T ++++ML R
Sbjct: 572 GGSGLISSVELIEEM-KVCGFSADSSTIKMVIDMLSDRR 609
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 204/463 (44%), Gaps = 11/463 (2%)
Query: 9 LTPTYLSQIIRT---QKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
L+P ++S ++++ ++ P A F ++ + KYTHN Y +++ +L + + +R
Sbjct: 114 LSPNFVSFVLKSDEIREKPDIAWSFFCWSR-KQKKYTHNLECYVSLVDVLALAKDVDRIR 172
Query: 66 DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIM 125
V ++++ + + I + G+V+E + +++ + + ++N L+ +
Sbjct: 173 FVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGL 232
Query: 126 VSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN 185
VS +++A +F G +K + N ++ C G++ A++ ++M+ +G +
Sbjct: 233 VSAMFVDSAERVFEVMESG-RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAI 245
+ +Y +++ D L M +KG + ++ LC++GK E
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEM----DEKGIQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVD 305
+ ++RKG K Y L G +E RL+H + +G P + +Y+ +
Sbjct: 348 TVFENMIRKGSKPNVAIYTVLIDGYAKSG-SVEDAIRLLHRMIDEGFKPDVVTYSVVVNG 406
Query: 306 LYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLP 365
L +++EA + G + + + L K RVDEA ++ EE M C
Sbjct: 407 LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEE-MSEKGCTR 465
Query: 366 NSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQL 425
+S YN L+ + +M ++ GC TY ILL + +E R EA +L
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 426 LEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
+ M K P A + +L GLC G+ A L+++ G
Sbjct: 526 WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMG 568
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 137/356 (38%), Gaps = 44/356 (12%)
Query: 145 WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHE 204
+E V A N L+ + G + L ++++M G P +Y LM GL +
Sbjct: 181 FEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDS 240
Query: 205 ATHLLYSMFWRISQKGN-GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
A + M + G DIV Y T++ C+ G+ ++A+E L + +G +A K
Sbjct: 241 AERVFEVM-----ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADK--- 292
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
+Y M Y++S + EM
Sbjct: 293 ---------------------------------ITYMTMIQACYADSDFGSCVALYQEMD 319
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
++G + F + LCK +++E V E +M+ PN +Y +L+ G+
Sbjct: 320 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE-NMIRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 384 AAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS 443
+ L++M + G D TY +++ LC+ R EA + Y+S
Sbjct: 379 EDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 444 LIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
LI GL GR EA E+M +G + + +L F + + +F R+
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 3/199 (1%)
Query: 282 RLIHEALIKGSVP-SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
R + + K P ++S+ NA+ ++E V +M++ G +PT + +
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
L VD A +V E M + P+ YN ++K G + +E L M + G
Sbjct: 232 LVSAMFVDSAERVFEV-MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR-GHE 289
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
AD+ TY+ +++ + + L ++M K +++ +I GLC G+ E
Sbjct: 290 ADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTV 349
Query: 461 LEDMISQGKLPEISVWKSL 479
E+MI +G P ++++ L
Sbjct: 350 FENMIRKGSKPNVAIYTVL 368
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 214/498 (42%), Gaps = 51/498 (10%)
Query: 43 HNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
HN Y+ +I+ +L V+ +M + E +S +N Y ++ + EA+ L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 103 FKNIPQFNCVNWTQSFNTLL----------QIMVSEDRLEA--------AHGLFVDNSCG 144
+ T +FNTL+ + M DR+ A +G+ V+ C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 145 ----------------WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDS 188
+++ V N ++ LC D AL +F+EM+ +G PN +
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 189 YAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEIL 248
Y+ L+ LC+ GR +A+ LL M I +K N D+ + L+DA ++GK EA ++
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDM---IERKIN-PDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 249 SKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYS 308
+++++ + Y+ L C R ++ K++ + K P + +YN +
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDR-LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 309 ESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSE 368
+++E +V EM RG + + L + D A ++ +E MV+ PN
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE-MVSDGVPPNIM 467
Query: 369 VYNILLKNLRNVGN---SAAVLESL--NKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
YN LL L G + V E L +KM + TY I++E +C+ + +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI------YTYNIMIEGMCKAGKVEDGW 521
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
L +S+K P +YN++I G C G + EA ++M G LP + +L
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 484 CNLEMMKASSEIFNRLRS 501
+AS+E+ +RS
Sbjct: 582 LRDGDREASAELIKEMRS 599
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 169/378 (44%), Gaps = 16/378 (4%)
Query: 126 VSEDRLEAAHGLFVDNSCGWEVKSR----VHALNLLMYALCGKGRSDLALQIFQEMDYQG 181
+SE +L+ A LF G VKSR + + L+ A+ + D+ + + ++M G
Sbjct: 57 LSELKLDDAVALF-----GEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 182 CYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF 241
N +Y+IL+ C +L A +L M + G +IV +LL+ C +
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMM----KLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNA 301
EA+ ++ ++ G + +N L + E LI + KG P L +Y
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA-LIDRMVAKGCQPDLVTYGV 226
Query: 302 MAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAV 361
+ L D A ++ +M+ +P I+ + LCK +D+A+ + +E M
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE-METK 285
Query: 362 NCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLE 421
PN Y+ L+ L N G + L+ M ++ D T+ L++ +E + +E
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVE 344
Query: 422 ASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLAS 481
A +L ++M +S P +Y+SLI G C R EA E M+S+ P++ + +L
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 482 LFCNLEMMKASSEIFNRL 499
FC + ++ E+F +
Sbjct: 405 GFCKYKRVEEGMEVFREM 422
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 6/281 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
++ +I G+L E + ++M + S + ++S IN + +DEA +F+ +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+C ++NTL++ R+E +F + S V + V N+L+ L G
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQAGD 446
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
D+A +IF+EM G PN +Y L+ GLC +G+L +A +F + + I
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM----VVFEYLQRSKMEPTIY 502
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y +++ +C+ GK E+ ++ + KG+K YN + C G E L E
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK-EEADALFKE 561
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
G++P+ YN + + + + ++I EM+ GF
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 216/512 (42%), Gaps = 64/512 (12%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+ +I L S + R++ ++M + C+ + F + Y AGL D+ + L +
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
F + +NT++ E R + + + V+ + + N + ALC +G+
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKM-VEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 167 SDLALQIFQEM---DYQGC-YPNRDSYAILMKGLCHDGRLHEATHLLYSM---------- 212
A +IF +M +Y G PN +Y +++KG C G L +A L S+
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 213 ---FW------------------RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKI 251
W +++ KG G I Y L+D LC+ G +A I+ +
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 252 LRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK 311
R G+ Y L CS G+ ++ K L+ E + +P+ + N + L+ +
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGK-VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 312 IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV------------------ 353
I EA++++ +M ++G+ V LC +D+AI++
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 354 ----IEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVG--CTADRETYI 407
+++ ++ NCLP+ Y+ LL L G A E+ N ++ +G D Y
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA---EAKNLFAEMMGEKLQPDSVAYN 563
Query: 408 ILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQ 467
I + C++ + A ++L+ M K ++YNSLI GL + +E +++M +
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 468 GKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
G P I + + C E ++ ++ + + +
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEM 655
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 184/445 (41%), Gaps = 70/445 (15%)
Query: 102 LFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYAL 161
L+K++ T +FN L++ + ++AA LF D K +L+
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF-DEMPEKGCKPNEFTFGILVRGY 192
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
C G +D L++ M+ G PN+ Y ++ C +GR ++ M ++ ++G
Sbjct: 193 CKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE----KMVEKMREEGL 248
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKI-LRKGLKAPKR---CYNRLDLSQCSDGRDI 277
DIV + + + ALC++GK +A I S + L + L P+ YN + C G +
Sbjct: 249 VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL-L 307
Query: 278 EGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAK 337
E K L + SL SYN L K EA+ V+ +M D+G P+ +
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367
Query: 338 VAALCK-----------------------------------VSRVDEAIKVIEEDMVAVN 362
+ LCK V +VD A +++E M+ N
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE-MMRNN 426
Query: 363 CLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEA 422
CLPN+ NILL +L +G + E L KM++K G D T I+++ LC +A
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK-GYGLDTVTCNIIVDGLCGSGELDKA 485
Query: 423 SQLLEQMSI----------KSYWPCAD-------------SYNSLIKGLCSLGRQYEAVM 459
++++ M + SY D +Y++L+ GLC GR EA
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 460 WLEDMISQGKLPEISVWKSLASLFC 484
+M+ + P+ + FC
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFC 570
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 203/448 (45%), Gaps = 36/448 (8%)
Query: 31 FNEAKSRYPKYTHNG---PVYATMISILGTS--GRLGEMRDVIEQMRQDSCECKDTV-FA 84
F EA++ + T G +Y+ I + G G L + + ++ M+++ C D V +
Sbjct: 342 FIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV-CPDAVTYG 400
Query: 85 SAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSC 143
++ Y + G VD A +L + + + NC+ + N LL + R+ A L N
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH 203
G+ + + N+++ LCG G D A++I + M G S A+ G + G +
Sbjct: 461 GYGLDTVT--CNIIVDGLCGSGELDKAIEIVKGMRVHG------SAALGNLGNSYIGLVD 512
Query: 204 EATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
++ + + D++ Y TLL+ LC+ G+F EA + ++++ + L+ Y
Sbjct: 513 DS----------LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
N C G+ I R++ + KG SL +YN++ + L +++I E ++ EM+
Sbjct: 563 NIFIHHFCKQGK-ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMK 621
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN- 382
++G P + + LC+ +V++A +++E M+ N PN + L++ V +
Sbjct: 622 EKGISPNICTYNTAIQYLCEGEKVEDATNLLDE-MMQKNIAPNVFSFKYLIEAFCKVPDF 680
Query: 383 --SAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADS 440
+ V E+ + C Y ++ L + L+A++LLE + + +
Sbjct: 681 DMAQEVFETAVSI-----CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFL 735
Query: 441 YNSLIKGLCSLGRQYEAVMWLEDMISQG 468
Y L++ LC A L MI +G
Sbjct: 736 YKDLVESLCKKDELEVASGILHKMIDRG 763
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 204/460 (44%), Gaps = 49/460 (10%)
Query: 58 SGRLGEMRDVIEQM--RQDSCECKDTV-FASAINIYANAGLVDEAITLFKNIPQFNCVNW 114
+ R +R++ +++ D E K T+ F + +VDEAI F + +
Sbjct: 130 TSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPK 189
Query: 115 TQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIF 174
T++ N +L ++ +R+E A + D E+KS V+ N+++ LC +G+ A
Sbjct: 190 TETCNHILTLLSRLNRIENAWVFYAD-MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL 248
Query: 175 QEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDA 234
M+ G P +Y L++G GR+ A ++ M KG D+ Y +L
Sbjct: 249 GIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM----KSKGFQPDMQTYNPILSW 304
Query: 235 LCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP 294
+C +G+ A E+L ++ GL YN L + CS+ D+E E + +G VP
Sbjct: 305 MCNEGR---ASEVLREMKEIGLVPDSVSYNIL-IRGCSNNGDLEMAFAYRDEMVKQGMVP 360
Query: 295 SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF--------------------------- 327
+ +YN + L+ E+KI+ A+ +I E++++G
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420
Query: 328 --------KPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRN 379
+PT+ + + + LC+ ++ EA ++ E+ +V P+ + N L+
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK-VVGKGMKPDLVMMNTLMDGHCA 479
Query: 380 VGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCAD 439
+GN L +M + D TY L+ LC E ++ EA +L+ +M + P
Sbjct: 480 IGNMDRAFSLLKEMDM-MSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 440 SYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
SYN+LI G G A M ++M+S G P + + +L
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 183/413 (44%), Gaps = 13/413 (3%)
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN 141
F IN+ G + +A + F ++NTL+Q R+E A L +
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR-LIISE 285
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
+ + N ++ +C +GR A ++ +EM G P+ SY IL++G ++G
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
L A ++ + ++G Y TL+ L + K E A ++ +I KG+
Sbjct: 343 LEMA----FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSV 398
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
YN L C G D + L E + G P+ +Y ++ L ++K EAD++ +
Sbjct: 399 TYNILINGYCQHG-DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE-DMVAVNCLPNSEVYNILLKNLRNV 380
+ +G KP + + C + +D A +++E DM+++N P+ YN L++ L
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN--PDDVTYNCLMRGLCGE 515
Query: 381 GNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADS 440
G E + +M K+ G D +Y L+ ++ A + ++M + P +
Sbjct: 516 GKFEEARELMGEM-KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLT 574
Query: 441 YNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASS 493
YN+L+KGL A L +M S+G +P S + S+ NL+ K+ S
Sbjct: 575 YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKSDS 627
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 180/395 (45%), Gaps = 20/395 (5%)
Query: 96 VDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWE------VKS 149
+D+++ LF ++ Q + F+ LL + + + L WE +
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYL-------WEQMQMLGIPH 114
Query: 150 RVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLL 209
+ N+L+ C + LAL +M G P+ ++ L+ G C R+++A +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY-- 172
Query: 210 YSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLS 269
MF ++ G ++V+Y T++D LC+ + + A+++L+++ + G+ YN L
Sbjct: 173 --MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 270 QCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKP 329
CS GR + T R++ + P + ++NA+ E ++ EA++ EM R P
Sbjct: 231 LCSSGRWSDAT-RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 330 TRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLES 389
+ + LC SR+DEA ++ MV+ C P+ Y+IL+ ++
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGF-MVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 390 LNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLC 449
+MS++ G + TY IL++ CR + A ++ +M P +YN L+ GLC
Sbjct: 349 FCEMSQR-GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 450 SLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
G+ +A++ L DM G +I + + C
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMC 442
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 141/335 (42%), Gaps = 35/335 (10%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
AL++F++ Y N +Y T+I L S ++ D++ +M +D + S
Sbjct: 170 ALYMFDQMVGM--GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWE 146
I+ ++G +A + + + +FN L+ V E R+ A F +
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE-FYEEMIRRS 286
Query: 147 VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEAT 206
+ + +LL+Y LC R D A ++F M +GC+P+ +Y+IL+ G C ++
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 207 HLLYSM-------------------------------FWRISQKGNGEDIVVYRTLLDAL 235
L M F R+ G +I+ Y LL L
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 236 CEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPS 295
C++GK E+A+ IL+ + + G+ A YN + C G ++ + +G +P
Sbjct: 407 CDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG-EVADAWDIYCSLNCQGLMPD 465
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
+ +Y M + LY + EAD + +M++ G P
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
G PS+ ++ ++ ++ +A + +M G+KP I+ + LCK +VD A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 351 IKVI---EEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYI 407
+ ++ E+D + P+ YN L+ L + G + ++ M+K+ D T+
Sbjct: 206 LDLLNRMEKDGIG----PDVVTYNSLISGLCSSGRWSDATRMVSCMTKR-EIYPDVFTFN 260
Query: 408 ILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQ 467
L++ +E R EA + E+M +S P +Y+ LI GLC R EA M+S+
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 468 GKLPEISVWKSLASLFCNLEMMKASSEIF 496
G P++ + L + +C + ++ ++F
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 2/192 (1%)
Query: 310 SKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEV 369
S++ A + +M G +P+ F + + C+ RV +A+ + ++ MV + PN +
Sbjct: 130 SQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ-MVGMGYKPNVVI 188
Query: 370 YNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQM 429
YN ++ L L+ LN+M K G D TY L+ LC R+ +A++++ M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 430 SIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMM 489
+ + +P ++N+LI GR EA + E+MI + P+I + L C +
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 490 KASSEIFNRLRS 501
+ E+F + S
Sbjct: 308 DEAEEMFGFMVS 319
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 133/343 (38%), Gaps = 42/343 (12%)
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
L+ A+ + D+ + ++++M G N + IL+ C +L A L M
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI--- 143
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
+ G+ IV + +LL+ C + +A+ + +++ G K YN + C +
Sbjct: 144 -KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS-KQ 201
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
++ L++ G P + +YN++ L S + +A +++ M R P F A
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
+ A K RV EA + EE + SL+
Sbjct: 262 LIDACVKEGRVSEAEEFYEE----------------------------MIRRSLD----- 288
Query: 397 VGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYE 456
D TY +L+ LC R EA ++ M K +P +Y+ LI G C +
Sbjct: 289 ----PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 457 AVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+ +M +G + + L +C + + EIF R+
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 194/465 (41%), Gaps = 17/465 (3%)
Query: 42 THNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAIT 101
+HN Y+ I+ +L ++ +M + S +N + + + EA+
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 102 LFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL---FVDNSCGWEVKSRVHALNLLM 158
L + + T +F TL+ + ++ A L V C ++ + +N
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN--- 223
Query: 159 YALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQ 218
LC +G DLAL + +M+ + Y ++ GLC + +A + +F ++
Sbjct: 224 -GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA----FDLFNKMET 278
Query: 219 KGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
KG D+ Y L+ LC G++ +A +LS +L K + +N L + +G+ +E
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Query: 279 GTKRLIHEALIKGS--VPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
K +++ ++K P + +YN + +++E +V EM RG +
Sbjct: 339 AEK--LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
+ + D A V ++ MV+ P+ YNILL L N GN L M K+
Sbjct: 397 LIHGFFQARDCDNAQMVFKQ-MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 397 VGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYE 456
D TY ++E LC+ + + L +S+K P +Y +++ G C G + E
Sbjct: 456 -DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 514
Query: 457 AVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
A +M G LP + +L AS+E+ +RS
Sbjct: 515 ADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 189/437 (43%), Gaps = 44/437 (10%)
Query: 96 VDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALN 155
+D+AI LF ++ + F+ LL + ++ + L G ++++ + N
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISL------GEQMQNLGISHN 109
Query: 156 LLMYAL-----CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA----- 205
L Y++ C + + LAL I +M G P+ + L+ G CH R+ EA
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 206 --------------THLLYSMFW------------RISQKGNGEDIVVYRTLLDALCEDG 239
T L++ +F R+ KG D+V Y +++ LC+ G
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 240 KFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSY 299
+ + A+ +L+K+ + ++A YN + C + ++ L ++ KG P + +Y
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK-YKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 300 NAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMV 359
N + L + + +A +++ +M ++ P F A + A K ++ EA K+ +E +
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 360 AVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRY 419
+ +C P+ YN L+K +E +MS++ G + TY L+ + R
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYTTLIHGFFQARDC 407
Query: 420 LEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
A + +QM P +YN L+ GLC+ G A++ E M + +I + ++
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 480 ASLFCNLEMMKASSEIF 496
C ++ ++F
Sbjct: 468 IEALCKAGKVEDGWDLF 484
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/522 (22%), Positives = 206/522 (39%), Gaps = 83/522 (15%)
Query: 27 ALHIFNE-AKSR-YPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFA 84
A+ +F + KSR +P ++ ++S + + + + EQM+ ++
Sbjct: 59 AIGLFGDMVKSRPFPSIVE----FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 85 SAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCG 144
IN + + A+ + + + + N+LL +R+ A L VD
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL-VDQMVE 173
Query: 145 WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHE 204
+ L++ L ++ A+ + + M +GC P+ +Y ++ GLC G
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 205 ATHLLYSMFWRISQKGNGE-DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
A +LL M +KG E D+V+Y T++D LC+ ++A ++ +K+ KG+K Y
Sbjct: 234 ALNLLNKM-----EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM- 322
N L C+ GR + + RL+ + L K P L +NA+ E K+ EA+K+ EM
Sbjct: 289 NPLISCLCNYGRWSDAS-RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 323 QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE-------------------------- 356
+ + P + + CK RV+E ++V E
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 357 --------DMVAVNCLPNSEVYNILLKNLRNVGN---SAAVLESLNKMSKKV-------- 397
MV+ P+ YNILL L N GN + V E + K K+
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 398 -----------------------GCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSY 434
G + TY ++ CR+ EA L +M
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 435 WPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVW 476
P + +YN+LI+ G + + +++M S G + S +
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
++D+AI + DMV P+ ++ LL + + N ++ SL + + +G + + T
Sbjct: 55 KLDDAIGLFG-DMVKSRPFPSIVEFSKLLSAIAKM-NKFDLVISLGEQMQNLGISHNLYT 112
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
Y I + CR + A +L +M Y P + NSL+ G C R EAV ++ M+
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 466 SQGKLPEISVWKSLA 480
G P+ + +L
Sbjct: 173 EMGYQPDTVTFTTLV 187
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 168/397 (42%), Gaps = 44/397 (11%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+ H+ Y + ILG + + M++ +E+MR D +TV A + +A AG +EA+
Sbjct: 117 HKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTV-AKIMRRFAGAGEWEEAV 175
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
+F + +F T+S N LL + E R+E A + + + H N+ ++
Sbjct: 176 GIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS--HITPNAHTFNIFIHG 233
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
C R + AL QEM G P SY +++ C + +Y M + G
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK----VYEMLSEMEANG 289
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
+ + + Y T++ +L +FEEA+ + +++ R G K
Sbjct: 290 SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK----------------------- 326
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVI-VEMQDRGFKPTRAIFEAKVA 339
P YN + L +++EA++V VEM + G + + + +A
Sbjct: 327 -------------PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
C D+AI++++E + C P+ Y LL++ G+ V + L +M K
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWP 436
+ D TY L++ LCR A L E+M + P
Sbjct: 434 SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 168/397 (42%), Gaps = 44/397 (11%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+ H+ Y + ILG + + M++ +E+MR D +TV A + +A AG +EA+
Sbjct: 117 HKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTV-AKIMRRFAGAGEWEEAV 175
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
+F + +F T+S N LL + E R+E A + + + H N+ ++
Sbjct: 176 GIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS--HITPNAHTFNIFIHG 233
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
C R + AL QEM G P SY +++ C + +Y M + G
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK----VYEMLSEMEANG 289
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
+ + + Y T++ +L +FEEA+ + +++ R G K
Sbjct: 290 SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK----------------------- 326
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVI-VEMQDRGFKPTRAIFEAKVA 339
P YN + L +++EA++V VEM + G + + + +A
Sbjct: 327 -------------PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
C D+AI++++E + C P+ Y LL++ G+ V + L +M K
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWP 436
+ D TY L++ LCR A L E+M + P
Sbjct: 434 SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/549 (21%), Positives = 216/549 (39%), Gaps = 66/549 (12%)
Query: 13 YLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMR 72
++ ++I QK+ AL F A S +P + H+ Y + L R + ++++M
Sbjct: 45 HIVRLILDQKSASGALETFRWA-STFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMP 103
Query: 73 QD-SCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRL 131
D +F + I + A L+ I++ + +F + FN++L ++V ED +
Sbjct: 104 DSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED-I 162
Query: 132 EAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAI 191
+ A F + V+ +LM L R ++ Q M G PN Y
Sbjct: 163 DIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNT 222
Query: 192 LMKGLCHDGRLHEATHLLYSM---------------------------FWRISQKGNGED 224
L+ LC +G++ A L+ M + G D
Sbjct: 223 LLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPD 282
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
+V +++ LC +G+ EA+E+L ++ KG K N L C+ G+ + +R
Sbjct: 283 VVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGK-MRVAQRFF 341
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
E KG +P++ +YN + +D A +M+ + A F + L
Sbjct: 342 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 401
Query: 345 SRVDEAIKVIE--EDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTAD 402
R D+ +K++E +D V+ + YN ++ LE L KM K D
Sbjct: 402 GRTDDGLKILEMMQDSDTVHG-ARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVD 460
Query: 403 RETYIILL--------------EML------------CRERRYL------EASQLLEQMS 430
R +I L +M+ C RY E+ +L+ M
Sbjct: 461 RSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 431 IKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMK 490
+ Y P + ++N++I G C + + ++EDM +G +P+ + L C ++
Sbjct: 521 TRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQ 580
Query: 491 ASSEIFNRL 499
+ +F+R+
Sbjct: 581 KAWLLFSRM 589
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 193/443 (43%), Gaps = 53/443 (11%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N VY T++ L +G++G R ++ +M+ E D F I+ Y N + +++ L
Sbjct: 216 NAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLL 271
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF--VDNSCGWEVKSRVHALNLLMYAL 161
+ V + +++++ +E R+ A + V++ G K V A N L+
Sbjct: 272 EKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG---KVDVVACNTLVKGY 328
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
C G+ +A + F EM+ +G PN ++Y +L+ G C G L A F +
Sbjct: 329 CALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSA----LDTFNDMKTDAI 384
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
+ + TL+ L G+ ++ ++IL ++ Q SD
Sbjct: 385 RWNFATFNTLIRGLSIGGRTDDGLKIL------------------EMMQDSD-------- 418
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
+H A I YN + Y E++ ++A + +++M+ P K+ +L
Sbjct: 419 -TVHGARI-------DPYNCVIYGFYKENRWEDALEFLLKMEK--LFPRAVDRSFKLISL 468
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
C+ +D+ +K + M+ +P+ V + L+ G LE +N M + G
Sbjct: 469 CEKGGMDD-LKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTR-GYLP 526
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
T+ ++ C++ + + + +E M+ + P +SYN L++ LC G +A +
Sbjct: 527 RSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLF 586
Query: 462 EDMISQGKLPEISVWKSLASLFC 484
M+ + +P+ S+W SL +FC
Sbjct: 587 SRMVEKSIVPDPSMWSSL--MFC 607
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 159/360 (44%), Gaps = 23/360 (6%)
Query: 147 VKSRVHALNLLMYALCGKGRSDLALQIFQ-EMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
V S H + L++ G AL+ F+ + G +R +Y L LC R
Sbjct: 40 VPSDDHIVRLILDQKSASG----ALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTV 95
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR 265
LL M I G D ++ T++ + I ++ + + G+K + +N
Sbjct: 96 YQLLDEMPDSI---GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNS 152
Query: 266 LDLSQCSDGRDI--EGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
+ + DI E R + + I G V +Y + L ++I + K++ M+
Sbjct: 153 ILDVLVKEDIDIAREFFTRKMMASGIHGDV---YTYGILMKGLSLTNRIGDGFKLLQIMK 209
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
G P ++ + ALCK +V A ++ E PN +NIL+ N
Sbjct: 210 TSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE-----PNDVTFNILISAY---CNE 261
Query: 384 AAVLESLNKMSK--KVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
+++S+ + K +G D T ++E+LC E R EA ++LE++ K +
Sbjct: 262 QKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVAC 321
Query: 442 NSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
N+L+KG C+LG+ A + +M +G LP + + L + +C++ M+ ++ + FN +++
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 149/341 (43%), Gaps = 28/341 (8%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P V+T T + +++ + +AL + +S+ K V A + G LG+MR
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVD----VVACNTLVKGYCA-LGKMR 335
Query: 66 DV----IEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWT-QSFNT 120
IE R+ +T + I Y + G++D A+ F ++ + + + W +FNT
Sbjct: 336 VAQRFFIEMERKGYLPNVET-YNLLIAGYCDVGMLDSALDTFNDM-KTDAIRWNFATFNT 393
Query: 121 LLQIMVSEDRLEAAHGLF-----VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQ 175
L++ + R + + D G +R+ N ++Y + R + AL+
Sbjct: 394 LIRGLSIGGRTDDGLKILEMMQDSDTVHG----ARIDPYNCVIYGFYKENRWEDALEFLL 449
Query: 176 EMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDAL 235
+M + +P + + LC G + + L + + ++ +G I+V L+
Sbjct: 450 KM--EKLFPRAVDRSFKLISLCEKGGMDD----LKTAYDQMIGEGGVPSIIVSHCLIHRY 503
Query: 236 CEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPS 295
+ GK EE++E+++ ++ +G +N + + C + + G K + + +G VP
Sbjct: 504 SQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIK-FVEDMAERGCVPD 562
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
SYN + +L + I +A + M ++ P +++ +
Sbjct: 563 TESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSS 603
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 32/380 (8%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQE 176
+FNTLL + EDR+ A LF G+ V++ A+ +F +
Sbjct: 178 TFNTLLHGLCLEDRISEALALF-----GYMVETGFLE----------------AVALFDQ 216
Query: 177 MDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
M G P ++ L+ GLC +GR+ EA L+ M KG D+V Y T+++ +C
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG----KGLHIDVVTYGTIVNGMC 272
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSL 296
+ G + A+ +LSK+ +K Y+ + C DG + + L E L KG P++
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA-QYLFSEMLEKGIAPNV 331
Query: 297 SSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+YN M S + +A +++ +M +R P F A ++A K ++ EA K+ +E
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 357 DMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRE 416
M+ P++ YN ++ + M+ + D T+ ++++ CR
Sbjct: 392 -MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA-----SPDVVTFNTIIDVYCRA 445
Query: 417 RRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVW 476
+R E QLL ++S + +YN+LI G C + A ++MIS G P+
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 477 KSLASLFCNLEMMKASSEIF 496
L FC E ++ + E+F
Sbjct: 506 NILLYGFCENEKLEEALELF 525
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 189/452 (41%), Gaps = 16/452 (3%)
Query: 52 ISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYA---NAGLVDEAITLFKNIPQ 108
+S G +LG DV+ C + + A+ ++ G + EA+ LF + +
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVE 219
Query: 109 FNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSD 168
+FNTL+ + E R+ A L V+ G + V ++ +C G +
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAAL-VNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 278
Query: 169 LALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVY 228
AL + +M+ P+ Y+ ++ LC DG +A +L M +KG ++ Y
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML----EKGIAPNVFTY 334
Query: 229 RTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
++D C G++ +A +L ++ + + +N L + +G+ E K L E L
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK-LCDEML 393
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
+ P +YN+M ++ D+A M D P F + C+ RVD
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
E ++++ E + + N+ YN L+ V N A + +M G D T I
Sbjct: 450 EGMQLLRE-ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH-GVCPDTITCNI 507
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
LL C + EA +L E + + +YN +I G+C + EA + G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 469 KLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
P++ + + S FC + ++ +F++++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 149/336 (44%), Gaps = 27/336 (8%)
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
R D+A+ ++++M+ + N S+ IL+K C H+ + L S F ++++ G D+
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD---CHKLSFSL-STFGKLTKLGFQPDV 176
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
V + TLL LC + + EA+ + ++ G ++++
Sbjct: 177 VTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQM------------------- 217
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
+ G P + ++N + L E ++ EA ++ +M +G + V +CK+
Sbjct: 218 --VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
A+ ++ + M + P+ +Y+ ++ L G+ + ++M +K G + T
Sbjct: 276 DTKSALNLLSK-MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK-GIAPNVFT 333
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
Y +++ C R+ +A +LL M + P ++N+LI G+ +EA ++M+
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 466 SQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
+ P+ + S+ FC + +F+ + S
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 123/310 (39%), Gaps = 10/310 (3%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y MI + GR + + ++ M + F + I+ G + EA L +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
T ++N+++ +R + A +F V N ++ C R
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-----DLMASPDVVTFNTIIDVYCRAKR 447
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
D +Q+ +E+ +G N +Y L+ G C L+ A L F + G D +
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL----FQEMISHGVCPDTI 503
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
LL CE+ K EEA+E+ I + YN + C G ++ L
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK-GSKVDEAWDLFCS 562
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
I G P + +YN M +S I +A+ + +M+D G +P + + + K
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Query: 347 VDEAIKVIEE 356
+D++I++I E
Sbjct: 623 IDKSIELISE 632
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 30/246 (12%)
Query: 280 TKRLIHEALI-KG--SVPSLSSYNAMAVDL-------YSESKIDEADKVIVEMQDRGFKP 329
++RLIH + KG S+PSL+ +L Y +S D D ++ R F
Sbjct: 46 SRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFY- 104
Query: 330 TRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLP-NSEVYNILLKNLRNVGNSAAVLE 388
T + +++R D AI + + + + +P N +NIL+K + + L
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRK--MEIRRIPLNIYSFNILIKCFCDCHKLSFSLS 162
Query: 389 SLNKMSKKVGCTADRETYIILLEMLCRERR---------------YLEASQLLEQMSIKS 433
+ K++K +G D T+ LL LC E R +LEA L +QM
Sbjct: 163 TFGKLTK-LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIG 221
Query: 434 YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASS 493
P ++N+LI GLC GR EA + M+ +G ++ + ++ + C + K++
Sbjct: 222 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 494 EIFNRL 499
+ +++
Sbjct: 282 NLLSKM 287
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 32/380 (8%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQE 176
+FNTLL + EDR+ A LF G+ V++ A+ +F +
Sbjct: 178 TFNTLLHGLCLEDRISEALALF-----GYMVETGFLE----------------AVALFDQ 216
Query: 177 MDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
M G P ++ L+ GLC +GR+ EA L+ M KG D+V Y T+++ +C
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV----GKGLHIDVVTYGTIVNGMC 272
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSL 296
+ G + A+ +LSK+ +K Y+ + C DG + + L E L KG P++
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA-QYLFSEMLEKGIAPNV 331
Query: 297 SSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+YN M S + +A +++ +M +R P F A ++A K ++ EA K+ +E
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 357 DMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRE 416
M+ P++ YN ++ + M+ + D T+ ++++ CR
Sbjct: 392 -MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA-----SPDVVTFNTIIDVYCRA 445
Query: 417 RRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVW 476
+R E QLL ++S + +YN+LI G C + A ++MIS G P+
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 477 KSLASLFCNLEMMKASSEIF 496
L FC E ++ + E+F
Sbjct: 506 NILLYGFCENEKLEEALELF 525
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 189/452 (41%), Gaps = 16/452 (3%)
Query: 52 ISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYA---NAGLVDEAITLFKNIPQ 108
+S G +LG DV+ C + + A+ ++ G + EA+ LF + +
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVE 219
Query: 109 FNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSD 168
+FNTL+ + E R+ A L V+ G + V ++ +C G +
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAAL-VNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 278
Query: 169 LALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVY 228
AL + +M+ P+ Y+ ++ LC DG +A +L M +KG ++ Y
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML----EKGIAPNVFTY 334
Query: 229 RTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
++D C G++ +A +L ++ + + +N L + +G+ E K L E L
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK-LCDEML 393
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
+ P +YN+M ++ D+A M D P F + C+ RVD
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
E ++++ E + + N+ YN L+ V N A + +M G D T I
Sbjct: 450 EGMQLLRE-ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH-GVCPDTITCNI 507
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
LL C + EA +L E + + +YN +I G+C + EA + G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 469 KLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
P++ + + S FC + ++ +F++++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 122/310 (39%), Gaps = 10/310 (3%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y MI + GR + + ++ M + F + I+ G + EA L +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
T ++N+++ +R + A +F V N ++ C R
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-----DLMASPDVVTFNTIIDVYCRAKR 447
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
D +Q+ +E+ +G N +Y L+ G C L+ A L M G D +
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI----SHGVCPDTI 503
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
LL CE+ K EEA+E+ I + YN + C G ++ L
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK-GSKVDEAWDLFCS 562
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
I G P + +YN M +S I +A+ + +M+D G +P + + + K
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Query: 347 VDEAIKVIEE 356
+D++I++I E
Sbjct: 623 IDKSIELISE 632
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 149/336 (44%), Gaps = 27/336 (8%)
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
R D+A+ ++++M+ + N S+ IL+K C H+ + L S F ++++ G D+
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD---CHKLSFSL-STFGKLTKLGFQPDV 176
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
V + TLL LC + + EA+ + ++ G +E L
Sbjct: 177 VTFNTLLHGLCLEDRISEALALFGYMVETGF--------------------LEAVA-LFD 215
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
+ + G P + ++N + L E ++ EA ++ +M +G + V +CK+
Sbjct: 216 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
A+ ++ + M + P+ +Y+ ++ L G+ + ++M +K G + T
Sbjct: 276 DTKSALNLLSK-MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK-GIAPNVFT 333
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
Y +++ C R+ +A +LL M + P ++N+LI G+ +EA ++M+
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 466 SQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
+ P+ + S+ FC + +F+ + S
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 14/306 (4%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTV-FASAINIYANAGLVDEAITLFKN 105
+ +IS G+L E + ++M C DTV + S I + D+A +F
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLH-RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426
Query: 106 IPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKG 165
+ + V +FNT++ + R++ L + S V + N L++ C
Sbjct: 427 MASPDVV----TFNTIIDVYCRAKRVDEGMQLLREISRRGLV-ANTTTYNTLIHGFCEVD 481
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
+ A +FQEM G P+ + IL+ G C + +L EA L F I D
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL----FEVIQMSKIDLDT 537
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
V Y ++ +C+ K +EA ++ + G++ + YN + C I L H
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA-ISDANVLFH 596
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
+ G P S+YN + +ID++ ++I EM+ GF + +C+VS
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVS 656
Query: 346 RVDEAI 351
DE I
Sbjct: 657 --DEEI 660
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 117/272 (43%), Gaps = 43/272 (15%)
Query: 267 DLSQCSDG--RDIE-----------GTKRLIHEALI-KG--SVPSLSSYNAMAVDL---- 306
D+ +C RDIE ++RLIH + KG S+PSL+ +L
Sbjct: 20 DIEKCEQKTKRDIEKKNTKSGGVRLNSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKS 79
Query: 307 ---YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
Y +S D D ++ R F T + +++R D AI + + + +
Sbjct: 80 GSHYFKSLDDAIDFFDYMVRSRPFY-TAVDCNKVIGVFVRMNRPDVAISLYRK--MEIRR 136
Query: 364 LP-NSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERR---- 418
+P N +NIL+K + + L + K++K +G D T+ LL LC E R
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK-LGFQPDVVTFNTLLHGLCLEDRISEA 195
Query: 419 -----------YLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQ 467
+LEA L +QM P ++N+LI GLC GR EA + M+ +
Sbjct: 196 LALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 468 GKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
G ++ + ++ + C + K++ + +++
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 188/459 (40%), Gaps = 50/459 (10%)
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL---- 137
VF + + GL+ EA +F+ + + V S N L +S+D + A +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLT-RLSKDCYKTATAIIVFR 235
Query: 138 -FVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGL 196
F + W V S N++++ +C GR A + M+ +G P+ SY+ ++ G
Sbjct: 236 EFPEVGVCWNVAS----YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 197 CHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
C G L + L+ M +KG + +Y +++ LC K EA E S+++R+G+
Sbjct: 292 CRFGELDKVWKLIEVM----KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 257 KAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEAD 316
Y L C G DI + +E + P + +Y A+ + EA
Sbjct: 348 LPDTVVYTTLIDGFCKRG-DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 317 KVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKN 376
K+ EM +G +P F + CK + +A +V M+ C PN Y L+
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV-HNHMIQAGCSPNVVTYTTLIDG 465
Query: 377 LRNVGNSAAVLESLNKMSK----------------------------------KVGCTAD 402
L G+ + E L++M K G AD
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 403 RETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLE 462
TY L++ C+ +A ++L++M K P ++N L+ G C G + L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 463 DMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
M+++G P + + SL +C +KA++ I+ + S
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/516 (22%), Positives = 201/516 (38%), Gaps = 56/516 (10%)
Query: 28 LHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQ-------DSCECKD 80
+ F+ Y + + V+ +L G L E R V E+M DSC
Sbjct: 158 VQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYL 217
Query: 81 TVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF-- 138
T + + Y A AI +F+ P+ S+N ++ + R++ AH L
Sbjct: 218 TRLSK--DCYKTA----TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 139 ----------------VDNSCGWEVKSRVHAL-----------NLLMYA-----LCGKGR 166
V+ C + +V L N +Y LC +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
A + F EM QG P+ Y L+ G C G + A+ Y M + D++
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM----HSRDITPDVL 387
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y ++ C+ G EA ++ ++ KGL+ + L C G + + +H
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR--VHN 445
Query: 287 ALIK-GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
+I+ G P++ +Y + L E +D A++++ EM G +P + + V LCK
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
++EA+K++ E A ++ Y L+ G E L +M K G T
Sbjct: 506 NIEEAVKLVGE-FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVT 563
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
+ +L+ C + +LL M K P A ++NSL+K C A +DM
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 466 SQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
S+G P+ +++L C MK + +F ++
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 151/344 (43%), Gaps = 7/344 (2%)
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
L+ C +G A + F EM + P+ +Y ++ G C G + EA L + MF
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-- 414
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
KG D V + L++ C+ G ++A + + +++ G Y L C +G D
Sbjct: 415 --KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG-D 471
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
++ L+HE G P++ +YN++ L I+EA K++ E + G +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
+ A CK +D+A ++++E M+ P +N+L+ G + LN M K
Sbjct: 532 LMDAYCKSGEMDKAQEILKE-MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 397 VGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYE 456
G + T+ L++ C A+ + + M + P +Y +L+KG C E
Sbjct: 591 -GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 457 AVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
A ++M +G +S + L F + + E+F+++R
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 139/366 (37%), Gaps = 45/366 (12%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
A F E SR T + Y +IS G + E + +M E F
Sbjct: 370 ASKFFYEMHSR--DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWE 146
IN Y AG + +A + ++ Q C ++ TL+ + E L++A+ L + W+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM---WK 484
Query: 147 V--KSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHE 204
+ + + N ++ LC G + A+++ E + G + +Y LM C G + +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 205 ATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN 264
A +L M KG IV + L++ C G E+ ++L+ +L KG+ +N
Sbjct: 545 AQEILKEML----GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 265 RLDLSQC---------------------SDGRDIEGTKR-------------LIHEALIK 290
L C DG+ E + L E K
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
G S+S+Y+ + K EA +V +M+ G + IF+ K R D
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 720
Query: 351 IKVIEE 356
+ I+E
Sbjct: 721 VDPIDE 726
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 188/459 (40%), Gaps = 50/459 (10%)
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL---- 137
VF + + GL+ EA +F+ + + V S N L +S+D + A +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLT-RLSKDCYKTATAIIVFR 235
Query: 138 -FVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGL 196
F + W V S N++++ +C GR A + M+ +G P+ SY+ ++ G
Sbjct: 236 EFPEVGVCWNVAS----YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 197 CHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
C G L + L+ M +KG + +Y +++ LC K EA E S+++R+G+
Sbjct: 292 CRFGELDKVWKLIEVM----KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 257 KAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEAD 316
Y L C G DI + +E + P + +Y A+ + EA
Sbjct: 348 LPDTVVYTTLIDGFCKRG-DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 317 KVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKN 376
K+ EM +G +P F + CK + +A +V M+ C PN Y L+
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV-HNHMIQAGCSPNVVTYTTLIDG 465
Query: 377 LRNVGNSAAVLESLNKMSK----------------------------------KVGCTAD 402
L G+ + E L++M K G AD
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 403 RETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLE 462
TY L++ C+ +A ++L++M K P ++N L+ G C G + L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 463 DMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
M+++G P + + SL +C +KA++ I+ + S
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/516 (22%), Positives = 201/516 (38%), Gaps = 56/516 (10%)
Query: 28 LHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQ-------DSCECKD 80
+ F+ Y + + V+ +L G L E R V E+M DSC
Sbjct: 158 VQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYL 217
Query: 81 TVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF-- 138
T + + Y A AI +F+ P+ S+N ++ + R++ AH L
Sbjct: 218 TRLSK--DCYKTA----TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 139 ----------------VDNSCGWEVKSRVHAL-----------NLLMYA-----LCGKGR 166
V+ C + +V L N +Y LC +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
A + F EM QG P+ Y L+ G C G + A+ Y M + D++
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM----HSRDITPDVL 387
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y ++ C+ G EA ++ ++ KGL+ + L C G + + +H
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR--VHN 445
Query: 287 ALIK-GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
+I+ G P++ +Y + L E +D A++++ EM G +P + + V LCK
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
++EA+K++ E A ++ Y L+ G E L +M K G T
Sbjct: 506 NIEEAVKLVGE-FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVT 563
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
+ +L+ C + +LL M K P A ++NSL+K C A +DM
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 466 SQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
S+G P+ +++L C MK + +F ++
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 151/344 (43%), Gaps = 7/344 (2%)
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
L+ C +G A + F EM + P+ +Y ++ G C G + EA L + MF
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-- 414
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
KG D V + L++ C+ G ++A + + +++ G Y L C +G D
Sbjct: 415 --KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG-D 471
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
++ L+HE G P++ +YN++ L I+EA K++ E + G +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
+ A CK +D+A ++++E M+ P +N+L+ G + LN M K
Sbjct: 532 LMDAYCKSGEMDKAQEILKE-MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 397 VGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYE 456
G + T+ L++ C A+ + + M + P +Y +L+KG C E
Sbjct: 591 -GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 457 AVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
A ++M +G +S + L F + + E+F+++R
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 139/366 (37%), Gaps = 45/366 (12%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
A F E SR T + Y +IS G + E + +M E F
Sbjct: 370 ASKFFYEMHSR--DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWE 146
IN Y AG + +A + ++ Q C ++ TL+ + E L++A+ L + W+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM---WK 484
Query: 147 V--KSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHE 204
+ + + N ++ LC G + A+++ E + G + +Y LM C G + +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 205 ATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN 264
A +L M KG IV + L++ C G E+ ++L+ +L KG+ +N
Sbjct: 545 AQEILKEML----GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 265 RLDLSQC---------------------SDGRDIEGTKR-------------LIHEALIK 290
L C DG+ E + L E K
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
G S+S+Y+ + K EA +V +M+ G + IF+ K R D
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 720
Query: 351 IKVIEE 356
+ I+E
Sbjct: 721 VDPIDE 726
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 188/437 (43%), Gaps = 40/437 (9%)
Query: 96 VDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRVHAL 154
++E I LF + Q + F+ +L + + LF CG + +++
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCG--IGHDLYSY 107
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
N+++ LC R +AL + +M G P+ + + L+ G C R+ +A L+ M
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM-- 165
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
+ G D+V+Y T++D C+ G +A+E+ ++ R G++A YN L C G
Sbjct: 166 --EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
R RL+ + +++ VP++ ++ A+ E K EA K+ EM R P +
Sbjct: 224 R-WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILL-------------KNLRNVG 381
+ + LC RVDEA ++++ MV CLP+ YN L+ K R +
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDL-MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 382 NSAAVLESLN------------------KMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
V +++ ++ ++ + TY ILL LC R +A
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
L E M +YN +I G+C +G +A + +G P++ + ++ S F
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 484 CNLEMMKASSEIFNRLR 500
C S ++ +++
Sbjct: 462 CRKRQWDKSDLLYRKMQ 478
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 142/320 (44%), Gaps = 16/320 (5%)
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
N ++ C G + A+++F M+ G + +Y L+ GLC GR +A L+ M
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
R +++ + ++D ++GKF EA+++ ++ R+ + YN L C G
Sbjct: 238 R----DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
R ++ K+++ + KG +P + +YN + ++DE K+ EM RG +
Sbjct: 294 R-VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL---RNVGNSAAVLESLN 391
+ + R D A +E ++ PN Y+ILL L V + + E++
Sbjct: 353 NTIIQGYFQAGRPDAA----QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 392 KMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSL 451
K ++ D TY I++ +C+ +A L +S K P SY ++I G C
Sbjct: 409 KSEIEL----DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 452 GRQYEAVMWLEDMISQGKLP 471
+ ++ + M G LP
Sbjct: 465 RQWDKSDLLYRKMQEDGLLP 484
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 139/334 (41%), Gaps = 42/334 (12%)
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVV 227
DL + +F M+ G + SY I++ LC R A ++ M + G D+V
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM----KFGYEPDVVT 141
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEA 287
+L++ C+ + +AI+++SK+ G + YN + C G L+++A
Sbjct: 142 VSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG--------LVNDA 193
Query: 288 LIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRV 347
V+L+ M+ G + + + VA LC R
Sbjct: 194 ----------------VELFDR------------MERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 348 DEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYI 407
+A +++ DMV + +PN + ++ G + ++ +M+++ D TY
Sbjct: 226 SDAARLMR-DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFTYN 283
Query: 408 ILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQ 467
L+ LC R EA Q+L+ M K P +YN+LI G C R E +M +
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 468 GKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
G + + + ++ + A+ EIF+R+ S
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 159/388 (40%), Gaps = 46/388 (11%)
Query: 49 ATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQ 108
+++I+ R+ + D++ +M + ++ + I+ GLV++A+ LF + +
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER 202
Query: 109 FNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSD 168
++N+L+ + R A L D ++ V ++ +G+
Sbjct: 203 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRD-MVMRDIVPNVITFTAVIDVFVKEGKFS 261
Query: 169 LALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVY 228
A+++++EM + P+ +Y L+ GLC GR+ EA +L M KG D+V Y
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV----TKGCLPDVVTY 317
Query: 229 RTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
TL++ C+ + +E ++ ++ ++GL
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGL-------------------------------- 345
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
V +YN + + + D A ++ M R P + + LC RV+
Sbjct: 346 ----VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVE 398
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
+A+ V+ E+M + YNI++ + +GN + +S K G D +Y
Sbjct: 399 KAL-VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK-GLKPDVVSYTT 456
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWP 436
++ CR+R++ ++ L +M P
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 192/454 (42%), Gaps = 12/454 (2%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y ++I+ G + + +M E + S + Y + G +++A+ L+ +
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS 167
+F TLL + + A LF + W VK N+++ C +G
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF-NEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE-DIV 226
A + +EM +G P+ SY L+ GLC G+ EA +F KGN E + +
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-----KVFVDGLHKGNCELNEI 613
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y LL C +GK EEA+ + +++++G+ CY L + +D + L+ E
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL-IDGSLKHKDRKLFFGLLKE 672
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
+G P Y +M EA + M + G P + A + LCK
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNL-RNVGNSAAVLESLNKMSKKVGCTADRET 405
V+EA +V+ M V+ +PN Y L L + + +E N + K G A+ T
Sbjct: 733 VNEA-EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK--GLLANTAT 789
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
Y +L+ CR+ R EAS+L+ +M P +Y ++I LC +A+ M
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 466 SQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+G P+ + +L C M ++E+ N +
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 184/422 (43%), Gaps = 8/422 (1%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+Y +I L L +++I M C+ + I+ V EA+ + K++
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL 288
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ ++ TL+ + E + + C A++ L+ L +G+
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC-LRFSPSEAAVSSLVEGLRKRGK 347
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
+ AL + + + G PN Y L+ LC + HEA LL+ +I + N V
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA-ELLFDRMGKIGLRPND---V 403
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y L+D C GK + A+ L +++ GLK YN L C G DI + + E
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG-DISAAEGFMAE 462
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
+ K P++ +Y ++ S+ KI++A ++ EM +G P+ F ++ L +
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETY 406
+ +A+K+ E M N PN YN++++ G+ + E L +M++K G D +Y
Sbjct: 523 IRDAVKLFNE-MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK-GIVPDTYSY 580
Query: 407 IILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMIS 466
L+ LC + EA ++ + + Y L+ G C G+ EA+ ++M+
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 467 QG 468
+G
Sbjct: 641 RG 642
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 174/419 (41%), Gaps = 46/419 (10%)
Query: 83 FASAINIYANAGLVDEAITLFKN-IPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN 141
F I Y + V + + +FK I + + + ++ + LL +V A LF D
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 142 -SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDG 200
S G ++ V+ ++ +LC A ++ M+ GC N Y +L+ GLC
Sbjct: 219 VSVG--IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276
Query: 201 RLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPK 260
++ EA + + + K D+V Y TL+ LC+ +FE +E++ ++L
Sbjct: 277 KVWEAVGIKKDL----AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML-------- 324
Query: 261 RCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIV 320
C L S PS ++ +++ L KI+EA ++
Sbjct: 325 -C---LRFS------------------------PSEAAVSSLVEGLRKRGKIEEALNLVK 356
Query: 321 EMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNV 380
+ D G P ++ A + +LCK + EA +++ + M + PN Y+IL+
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEA-ELLFDRMGKIGLRPNDVTYSILIDMFCRR 415
Query: 381 GNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADS 440
G L L +M G Y L+ C+ A + +M K P +
Sbjct: 416 GKLDTALSFLGEMV-DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 441 YNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
Y SL+ G CS G+ +A+ +M +G P I + +L S +++ + ++FN +
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 169/384 (44%), Gaps = 10/384 (2%)
Query: 93 AGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRV 151
AG ++++ L + +F + TL+ + +E A LF + G R
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 152 HALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYS 211
+ + L+ L G +++++M G +PN +Y +M LC DGR +A +
Sbjct: 236 YTV--LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA----FQ 289
Query: 212 MFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQC 271
+F + ++G +IV Y TL+ LC + K EA +++ ++ G+ YN L C
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 272 SDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTR 331
G+ + L + +G PSL +YN + + A K++ EM++RG KP++
Sbjct: 350 GVGK-LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 332 AIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLN 391
+ + + +++AI+ + M + +P+ Y++L+ G
Sbjct: 409 VTYTILIDTFARSDNMEKAIQ-LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 392 KMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSL 451
M +K C + Y ++ C+E A +LL++M K P SY +I+ LC
Sbjct: 468 SMVEK-NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526
Query: 452 GRQYEAVMWLEDMISQGKLPEISV 475
+ EA +E MI G P S+
Sbjct: 527 RKSKEAERLVEKMIDSGIDPSTSI 550
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 180/411 (43%), Gaps = 9/411 (2%)
Query: 74 DSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEA 133
++ + K ++ IN Y + ++ +I+ F + V + FN LL +V
Sbjct: 88 ETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQ 147
Query: 134 AHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILM 193
F +N +V V++ +L+ C G + + + E+ G PN Y L+
Sbjct: 148 WWSFFNENKS--KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205
Query: 194 KGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILR 253
G C G + +A L F+ + + G + Y L++ L ++G ++ E+ K+
Sbjct: 206 DGCCKKGEIEKAKDL----FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQE 261
Query: 254 KGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKID 313
G+ YN + C DGR + ++ E +G ++ +YN + L E K++
Sbjct: 262 DGVFPNLYTYNCVMNQLCKDGRTKDAF-QVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 314 EADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNIL 373
EA+KV+ +M+ G P + + C V ++ +A+ + D+ + P+ YNIL
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC-RDLKSRGLSPSLVTYNIL 379
Query: 374 LKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKS 433
+ G+++ + + +M ++ G + TY IL++ R +A QL M
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEER-GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 434 YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
P +Y+ LI G C G+ EA + M+ + P ++ ++ +C
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 43/307 (14%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
A +F+E + R + N Y T+I L +L E V++QM+ D + +
Sbjct: 287 AFQVFDEMRER--GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWE 146
I+ + G + +A++L +++ + GL
Sbjct: 345 IDGFCGVGKLGKALSLCRDL--------------------------KSRGL--------- 369
Query: 147 VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEAT 206
+ N+L+ C KG + A ++ +EM+ +G P++ +Y IL+ + +A
Sbjct: 370 -SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 207 HLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL 266
L SM + G D+ Y L+ C G+ EA + ++ K + + YN +
Sbjct: 429 QLRLSM----EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 267 DLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRG 326
L C +G K L+ E K P+++SY M L E K EA++++ +M D G
Sbjct: 485 ILGYCKEGSSYRALK-LLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 327 FKPTRAI 333
P+ +I
Sbjct: 544 IDPSTSI 550
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 2/176 (1%)
Query: 311 KIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVY 370
+I+++ +++E+ + GF P I+ + CK +++A + E M + + N Y
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE-MGKLGLVANERTY 236
Query: 371 NILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMS 430
+L+ L G E KM + G + TY ++ LC++ R +A Q+ ++M
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQED-GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 431 IKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNL 486
+ +YN+LI GLC + EA ++ M S G P + + +L FC +
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 197/438 (44%), Gaps = 11/438 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+Y I G G++ ++ + + + + S I + A +DEA+ +F+++
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ V T ++NT++ S + + A+ L + S V A N ++ L G+
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS-VIAYNCILTCLRKMGK 358
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
D AL++F+EM + PN +Y IL+ LC G+L A L SM + G ++
Sbjct: 359 VDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSM----QKAGLFPNVR 413
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
++D LC+ K +EA + ++ K + + L GR + K ++E
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK--VYE 471
Query: 287 ALIKGSVPSLS-SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
++ + S Y ++ + ++ + ++ K+ +M ++ P + + + K
Sbjct: 472 KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG 531
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
++ + EE + A +P++ Y+IL+ L G + E M K+ GC D
Sbjct: 532 EPEKGRAMFEE-IKARRFVPDARSYSILIHGLIKAGFANETYELFYSM-KEQGCVLDTRA 589
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
Y I+++ C+ + +A QLLE+M K + P +Y S+I GL + R EA M E+
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 466 SQGKLPEISVWKSLASLF 483
S+ + ++ SL F
Sbjct: 650 SKRIELNVVIYSSLIDGF 667
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 190/453 (41%), Gaps = 49/453 (10%)
Query: 51 MISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFN 110
M+ L S +L E + E+M C + F S I+ G VD+A +++ + +
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 111 CVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSCGWEVKSRVHALNLLMYALCGKGRS 167
C + + +L++ + R E H ++ ++ +C +++ LN M + G
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ----LLNTYMDCMFKAGEP 533
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVV 227
+ +F+E+ + P+ SY+IL+ GL G +E L YSM ++G D
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM----KEQGCVLDTRA 589
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEA 287
Y ++D C+ GK +A ++L E
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLL------------------------------------EEM 613
Query: 288 LIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRV 347
KG P++ +Y ++ L ++DEA + E + + + I+ + + KV R+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 348 DEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYI 407
DEA ++EE ++ PN +N LL L L M K++ CT ++ TY
Sbjct: 674 DEAYLILEE-LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM-KELKCTPNQVTYG 731
Query: 408 ILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQ 467
IL+ LC+ R++ +A ++M + P SY ++I GL G EA + +
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 468 GKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
G +P+ + + ++ N + +F R
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 151/342 (44%), Gaps = 10/342 (2%)
Query: 145 WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHE 204
++ + A L+ A SD+ L +FQ+M G P + L++G +GR+
Sbjct: 162 FKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDS 221
Query: 205 ATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN 264
A LL M DIV+Y +D+ + GK + A + +I GLK + Y
Sbjct: 222 ALSLLDEM----KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 265 RLDLSQCSDGRDIEGTKRLIHEALIKG-SVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
+ C R E + H L K VP +YN M + S K DEA ++ +
Sbjct: 278 SMIGVLCKANRLDEAVEMFEH--LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
+G P+ + + L K+ +VDEA+KV EE + + PN YNIL+ L G
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE--MKKDAAPNLSTYNILIDMLCRAGKL 393
Query: 384 AAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS 443
E + M +K G + T I+++ LC+ ++ EA + E+M K P ++ S
Sbjct: 394 DTAFELRDSM-QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 444 LIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCN 485
LI GL +GR +A E M+ V+ SL F N
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 211/488 (43%), Gaps = 42/488 (8%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y TMI G++G+ E ++E+ R + + G VDEA+ +F+ +
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS 167
+ N + ++N L+ ++ +L+ A L D+ + V +N+++ LC +
Sbjct: 371 KDAAPNLS-TYNILIDMLCRAGKLDTAFEL-RDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM--------------- 212
D A +F+EMDY+ C P+ ++ L+ GL GR+ +A + M
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 213 ---FWRISQKGNGE-------------DIVVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
F+ +K +G D+ + T +D + + G+ E+ + +I +
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 257 KAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEAD 316
R Y+ L G E T L + +G V +YN + K+++A
Sbjct: 549 VPDARSYSILIHGLIKAGFANE-TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 317 KVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE---DMVAVNCLPNSEVYNIL 373
+++ EM+ +GF+PT + + + L K+ R+DEA + EE + +N + +Y+ L
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV----IYSSL 663
Query: 374 LKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKS 433
+ VG L ++ +K G T + T+ LL+ L + EA + M
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQK-GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 434 YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASS 493
P +Y LI GLC + + +A ++ ++M QG P + ++ S + +
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 494 EIFNRLRS 501
+F+R ++
Sbjct: 783 ALFDRFKA 790
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 195/468 (41%), Gaps = 15/468 (3%)
Query: 37 RYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLV 96
R K+ Y T+I M + +QM++ E +F + I +A G V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 97 DEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNL 156
D A++L + + +N + +++ A F + V ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
+ LC R D A+++F+ ++ P +Y ++ G G+ EA YS+ R
Sbjct: 280 IG-VLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA----YSLLERQ 334
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
KG+ ++ Y +L L + GK +EA+++ + ++K YN L C G+
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGK- 392
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
++ L G P++ + N M L K+DEA + EM + P F +
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
+ L KV RVD+A KV E+ M+ +C NS VY L+KN N G E +K+ K
Sbjct: 453 LIDGLGKVGRVDDAYKVYEK-MLDSDCRTNSIVYTSLIKNFFNHGRK----EDGHKIYKD 507
Query: 397 V---GCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGR 453
+ C+ D + ++ + + + + E++ + + P A SY+ LI GL G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 454 QYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
E M QG + + + + FC + + ++ +++
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 157/370 (42%), Gaps = 15/370 (4%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQ 175
++N L+ ++E A D G+ V ++ N L+ C +G D A +
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP--YSFNPLIEGYCKQGLFDDAWGVTD 332
Query: 176 EMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDAL 235
EM G YP +Y I + LC GR+ +A LL SM D+V Y TL+
Sbjct: 333 EMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM--------AAPDVVSYNTLMHGY 384
Query: 236 CEDGKFEEAIEILSKILRKGLKAPK-RCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP 294
+ GKF EA +L LR G P YN L C G ++EG +RL E + P
Sbjct: 385 IKMGKFVEA-SLLFDDLRAGDIHPSIVTYNTLIDGLCESG-NLEGAQRLKEEMTTQLIFP 442
Query: 295 SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVI 354
+ +Y + + A +V EM +G KP + + ++ D+A ++
Sbjct: 443 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH 502
Query: 355 EEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLC 414
EE + + P+ +YN+ + L VGN +E K+ +VG D TY ++
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF-RVGLVPDHVTYTTVIRGYL 561
Query: 415 RERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEIS 474
++ A L ++M K +P +Y LI G GR +A + +M +G P +
Sbjct: 562 ENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVM 621
Query: 475 VWKSLASLFC 484
+L C
Sbjct: 622 THNALLYGMC 631
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 144/364 (39%), Gaps = 76/364 (20%)
Query: 84 ASAINIYANA----GLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFV 139
S NIY A G +D+A L ++ + V S+NTL+ + + A LF
Sbjct: 343 TSTYNIYICALCDFGRIDDARELLSSMAAPDVV----SYNTLMHGYIKMGKFVEASLLFD 398
Query: 140 DNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHD 199
D G ++ + N L+ LC G + A ++ +EM Q +P+ +Y L+KG +
Sbjct: 399 DLRAG-DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 200 GRLHEATHLLYSMFWR--------------------------------ISQKGNGEDIVV 227
G L AT + M + ++ + D+ +
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR-----LDLSQCSDGRDI--EGT 280
Y +D LC+ G +AIE KI R GL Y L+ Q R++ E
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 281 KRLIHEALI---------------------------KGSVPSLSSYNAMAVDLYSESKID 313
++ ++ ++I +G P++ ++NA+ + ID
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 314 EADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNIL 373
EA + + +M++ G P + + ++ C + +E +K+ +E M+ P+ + L
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE-MLDKEIEPDGYTHRAL 696
Query: 374 LKNL 377
K+L
Sbjct: 697 FKHL 700
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 120/287 (41%), Gaps = 7/287 (2%)
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS 272
F ++ +KG + +L L + +A + ++ G+ +N + L C
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM-LDSCF 249
Query: 273 DGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRA 332
D+E ++ E + S +YN + K++EA + +M+ GF T
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 333 IFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNK 392
F + CK D+A V +E M+ P + YNI + L + G E L+
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDE-MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 368
Query: 393 MSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLG 452
M+ D +Y L+ + +++EAS L + + P +YN+LI GLC G
Sbjct: 369 MA-----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 423
Query: 453 RQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
A E+M +Q P++ + +L F + ++E+++ +
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 470
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 201/463 (43%), Gaps = 17/463 (3%)
Query: 45 GPVYATMISILGT---SGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAIT 101
GP T+ S+L R+ E +++QM + + F + ++ EA+
Sbjct: 132 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 102 LFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYAL 161
L + + C ++ ++ + + A L G ++++ V + ++ +L
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYSTVIDSL 250
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
C D AL +F EMD +G P+ +Y+ L+ LC+ GR +A+ LL M R K N
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER---KIN 307
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
++V + +L+DA ++GK EA ++ +++++ + YN L C R ++ +
Sbjct: 308 -PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR-LDEAQ 365
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
++ + K +P + +YN + K+ + ++ +M RG + +
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN---SAAVLESLNKMSKKVG 398
+ S D A V ++ MV+ PN YN LL L G + V E L K +
Sbjct: 426 FQASDCDNAQMVFKQ-MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME-- 482
Query: 399 CTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAV 458
D TY I+ E +C+ + + L +S+K P +YN++I G C G + EA
Sbjct: 483 --PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 459 MWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
M G LP+ + +L AS+E+ +RS
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 172/384 (44%), Gaps = 21/384 (5%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSR----VHALNLLMYALCGKGRSDLALQ 172
S N LL + +L+ A LF G VKSR + + L+ A+ + DL +
Sbjct: 37 SRNALLHL-----KLDEAVDLF-----GEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS 86
Query: 173 IFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLL 232
++M+ G N +Y I++ LC +L A +L M + G G IV +LL
Sbjct: 87 FGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM----KLGYGPSIVTLNSLL 142
Query: 233 DALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGS 292
+ C + EA+ ++ +++ G + + L + E L+ ++KG
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA-LVERMVVKGC 201
Query: 293 VPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIK 352
P L +Y A+ L + D A ++ +M+ + I+ + +LCK VD+A+
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 353 VIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEM 412
+ E M P+ Y+ L+ L N G + L+ M ++ + T+ L++
Sbjct: 262 LFTE-MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVVTFNSLIDA 319
Query: 413 LCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
+E + +EA +L ++M +S P +YNSLI G C R EA M+S+ LP+
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 473 ISVWKSLASLFCNLEMMKASSEIF 496
+ + +L + FC + + E+F
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELF 403
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 3/320 (0%)
Query: 180 QGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDG 239
+G Y + SY + L + LH +F + + IV + LL A+ +
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 240 KFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSY 299
KF+ I K+ G+ YN + C + + ++ + + G PS+ +
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQ-LSFALAILGKMMKLGYGPSIVTL 138
Query: 300 NAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMV 359
N++ ++I EA ++ +M + G++P F V L + ++ EA+ ++E MV
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER-MV 197
Query: 360 AVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRY 419
C P+ Y ++ L G L LNKM K AD Y +++ LC+ R
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYSTVIDSLCKYRHV 256
Query: 420 LEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
+A L +M K P +Y+SLI LC+ GR +A L DM+ + P + + SL
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 480 ASLFCNLEMMKASSEIFNRL 499
F + + ++F+ +
Sbjct: 317 IDAFAKEGKLIEAEKLFDEM 336
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 6/263 (2%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K N + ++I G+L E + ++M Q S + + S IN + +DEA
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+F + +C+ ++NTL+ ++ LF D S V + V L++
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV-TYTTLIH 423
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
D A +F++M G +PN +Y L+ GLC +G+L +A +F + +
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM----VVFEYLQKS 479
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
DI Y + + +C+ GK E+ ++ + KG+K YN + C G E
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 280 TKRLIHEALIKGSVPSLSSYNAM 302
I + G +P +YN +
Sbjct: 540 YTLFI-KMKEDGPLPDSGTYNTL 561
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 186/450 (41%), Gaps = 93/450 (20%)
Query: 52 ISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNC 111
+++LG +LG D++ +S +N Y + + EA+ L +
Sbjct: 135 LAVLGKMMKLGYEPDIV-------------TLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 112 VNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLAL 171
T +FNTL+ HGLF+ N ++ A+
Sbjct: 182 QPNTVTFNTLI------------HGLFLHN------------------------KASEAV 205
Query: 172 QIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE-DIVVYRT 230
+ M +GC P+ +Y ++ GLC G + A LL M +KG E D+V+Y T
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-----EKGKIEADVVIYTT 260
Query: 231 LLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIK 290
++DALC +A+ + +++ KG++ YN L C+ GR + + RL+ + + +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS-RLLSDMIER 319
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
P++ +++A+ E K+ EA+K+ EM R P + + + C R+DEA
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 351 IKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILL 410
K + E M++ +C PN YN L+K
Sbjct: 380 -KHMFELMISKDCFPNVVTYNTLIKGF--------------------------------- 405
Query: 411 EMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL 470
C+ +R E +L +MS + +YN+LI+GL G A + M+S G
Sbjct: 406 ---CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 471 PEISVWKSLASLFCNLEMMKASSEIFNRLR 500
P+I + L C ++ + +F L+
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 195/465 (41%), Gaps = 49/465 (10%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
+Y N + T+I L + E +I++M C+ + + +N G +D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
++L K + + ++++ V ++
Sbjct: 240 LSLLKKMEK------------------------------------GKIEADVVIYTTIID 263
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
ALC + AL +F EMD +G PN +Y L++ LC+ GR +A+ LL M I +K
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM---IERK 320
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
N ++V + L+DA ++GK EA ++ +++++ + Y+ L C R ++
Sbjct: 321 IN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR-LDE 378
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
K + + K P++ +YN + +++E ++ EM RG + +
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN---SAAVLESLNKMSKK 396
L + D A K+ ++ MV+ P+ Y+ILL L G + V E L K +
Sbjct: 439 GLFQAGDCDMAQKIFKK-MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 397 VGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYE 456
D TY I++E +C+ + + L +S+K P Y ++I G C G + E
Sbjct: 498 ----PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 457 AVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
A +M G LP + +L AS+E+ +RS
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 170/404 (42%), Gaps = 43/404 (10%)
Query: 96 VDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALN 155
+D+A+ LF + Q + FN LL + ++ + L + + +++ N
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISL-GERMQNLRISYDLYSYN 119
Query: 156 LLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWR 215
+L+ C + + LAL + +M G P+ + + L+ G CH R+ EA L+ MF
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 216 ISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR 275
Q + V + TL+ L K EA+ ++ +++ +G +
Sbjct: 180 EYQ----PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ------------------ 217
Query: 276 DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFE 335
P L +Y + L ID A ++ +M+ + I+
Sbjct: 218 ------------------PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 336 AKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSK 395
+ ALC V++A+ + E M PN YN L++ L N G + L+ M +
Sbjct: 260 TIIDALCNYKNVNDALNLFTE-MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 396 KVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQY 455
+ + T+ L++ +E + +EA +L ++M +S P +Y+SLI G C R
Sbjct: 319 R-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 456 EAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
EA E MIS+ P + + +L FC + ++ E+F +
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K N ++ +I G+L E + ++M + S + ++S IN + +DEA
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+F+ + +C ++NTL++ R+E LF + S V + V N L+
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYNTLIQ 438
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
L G D+A +IF++M G P+ +Y+IL+ GLC G+L +A +F + +
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL----VVFEYLQKS 494
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
DI Y +++ +C+ GK E+ ++ + KG+K Y + C G E
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK-EE 553
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
L E G++P+ +YN + + + ++I EM+ GF
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 141/310 (45%), Gaps = 9/310 (2%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P V+T + L + ++A +++E R + Y+++I+ RL E +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 66 DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIM 125
+ E M C + + I + A V+E + LF+ + Q V T ++NTL+Q +
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 126 VSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN 185
+ A +F V + ++L+ LC G+ + AL +F+ + P+
Sbjct: 441 FQAGDCDMAQKIF-KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAI 245
+Y I+++G+C G++ + + +F +S KG ++++Y T++ C G EEA
Sbjct: 500 IYTYNIMIEGMCKAGKVEDG----WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVD 305
+ ++ G YN L ++ DG D + LI E G V S+ +M ++
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDG-DKAASAELIKEMRSCGFVGDASTI-SMVIN 613
Query: 306 LYSESKIDEA 315
+ + +++++
Sbjct: 614 MLHDGRLEKS 623
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 12/308 (3%)
Query: 180 QGCYPNRDSYAI---LMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
+G Y + SY L + + D +L +A L F + Q IV + LL A+
Sbjct: 36 RGVYFSAASYDYREKLSRNVLLDLKLDDAVDL----FGEMVQSRPLPSIVEFNKLLSAIA 91
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIK-GSVPS 295
+ KF+ I + ++ + L+ Y+ L C R + ++K G P
Sbjct: 92 KMNKFDLVISLGERM--QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPD 149
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
+ + +++ +I EA ++ +M ++P F + L ++ EA+ +I+
Sbjct: 150 IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALID 209
Query: 356 EDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCR 415
MVA C P+ Y ++ L G+ L L KM K AD Y +++ LC
Sbjct: 210 R-MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVIYTTIIDALCN 267
Query: 416 ERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISV 475
+ +A L +M K P +YNSLI+ LC+ GR +A L DMI + P +
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 476 WKSLASLF 483
+ +L F
Sbjct: 328 FSALIDAF 335
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 204/461 (44%), Gaps = 9/461 (1%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
++ NG ++ + +L E+ DV+ +R ++ + + ++ YA +G + +A
Sbjct: 94 EFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKA 153
Query: 100 ITLFKNIPQ-FNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLM 158
+ ++ + + ++ V + N+LL ++V RL A ++ D C ++ +L+
Sbjct: 154 VEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVY-DEMCDRGDSVDNYSTCILV 212
Query: 159 YALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQ 218
+C +G+ ++ ++ + +GC PN Y ++ G C G + A Y +F +
Sbjct: 213 KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA----YLVFKELKL 268
Query: 219 KGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
KG + + T+++ C++G F + +LS++ +GL+ N + ++ G ++
Sbjct: 269 KGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVD 328
Query: 279 GTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKV 338
+ I + P +++YN + L E K + A + E +G P + +
Sbjct: 329 PAES-IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLI 387
Query: 339 AALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVG 398
A CK D A K++ + M C P+ Y IL+ L G+ + K+ + G
Sbjct: 388 QAYCKSKEYDIASKLLLQ-MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR-G 445
Query: 399 CTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAV 458
+ D Y +L+ LC+ R+L A L +M ++ P A Y +LI G G EA
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 459 MWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+ +G ++ ++ FC M+ + NR+
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 189/473 (39%), Gaps = 44/473 (9%)
Query: 48 YATMISILG--TSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKN 105
Y+T I + G G++ R +IE C + + I Y G ++ A +FK
Sbjct: 206 YSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKE 265
Query: 106 IPQFNCVNWTQSFNTLLQ------IMVSEDRL----------------------EAAHGL 137
+ + ++F T++ V+ DRL + HG
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY 325
Query: 138 FVD--NSCGW----EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAI 191
VD S GW + K V N+L+ LC +G+ ++A+ E +G PN SYA
Sbjct: 326 KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385
Query: 192 LMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKI 251
L++ C A+ LL M +++G DIV Y L+ L G ++A+ + K+
Sbjct: 386 LIQAYCKSKEYDIASKLLLQM----AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 252 LRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK 311
+ +G+ YN L C GR + K L E L + +P Y +
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPA-KLLFSEMLDRNILPDAYVYATLIDGFIRSGD 500
Query: 312 IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
DEA KV ++G K A + C+ +DEA+ + M + +P+ Y+
Sbjct: 501 FDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNR-MNEEHLVPDKFTYS 559
Query: 372 ILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSI 431
++ + A ++ M K C + TY L+ C + + A + ++M +
Sbjct: 560 TIIDGYVKQQDMATAIKIFRYMEKN-KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQL 618
Query: 432 KSYWPCADSYNSLIKGLCSLGRQYE-AVMWLEDMISQGKLPEISVWKSLASLF 483
+ P +Y +LI+ L E AV + E M++ +P + L F
Sbjct: 619 RDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 147/387 (37%), Gaps = 27/387 (6%)
Query: 83 FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL---FV 139
+A I Y + D A L + + C ++ L+ +V ++ A + +
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 140 DNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHD 199
D V N+LM LC GR A +F EM + P+ YA L+ G
Sbjct: 443 DRG----VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498
Query: 200 GRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAP 259
G EA +F +KG D+V + ++ C G +EA+ ++++ + L
Sbjct: 499 GDFDEAR----KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPD 554
Query: 260 KRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVI 319
K Y+ + + +D+ ++ P++ +Y ++ + A++
Sbjct: 555 KFTYSTI-IDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETF 613
Query: 320 VEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL-- 377
EMQ R P + + +L K S E E M+ C+PN +N LL+
Sbjct: 614 KEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Query: 378 ------------RNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQL 425
N G S+ E ++M K G + Y L LC A
Sbjct: 674 KTSGKVLAEPDGSNHGQSSLFSEFFHRM-KSDGWSDHAAAYNSALVCLCVHGMVKTACMF 732
Query: 426 LEQMSIKSYWPCADSYNSLIKGLCSLG 452
++M K + P S+ +++ G C +G
Sbjct: 733 QDKMVKKGFSPDPVSFAAILHGFCVVG 759
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 164/385 (42%), Gaps = 45/385 (11%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQE 176
+F +LL +R+E A LF D G K V L+ LC + A+++F +
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALF-DQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 177 MDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
M G PN +Y L+ GLC GR +A LL M R + +++ + L+DA
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE----PNVITFTALIDAFV 269
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV-PS 295
+ GK EA E+ + +I+ SV P
Sbjct: 270 KVGKLMEAKEL-------------------------------------YNVMIQMSVYPD 292
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
+ +Y ++ L +DEA ++ M+ G P I+ + CK RV++ +K+
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 356 EDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCR 415
E M + N+ Y +L++ VG E N+MS + D TY +LL+ LC
Sbjct: 353 E-MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA-PPDIRTYNVLLDGLCC 410
Query: 416 ERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISV 475
+ +A + E M + +Y +I+G+C LG+ +A + S+G P +
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT 470
Query: 476 WKSLASLFCNLEMMKASSEIFNRLR 500
+ ++ S FC ++ + +F +++
Sbjct: 471 YTTMISGFCRRGLIHEADSLFKKMK 495
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 8/405 (1%)
Query: 97 DEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNL 156
++A+ LF + + F LL ++ +R + LF + + N+
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQI-LGIPPLLCTCNI 123
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
+M+ +C + A +M G P+ ++ L+ G CH R+ +A ++F +I
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI----ALFDQI 179
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
G ++V Y TL+ LC++ A+E+ +++ G + YN L C GR
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
+ L+ + + + P++ ++ A+ K+ EA ++ M P + +
Sbjct: 240 GDAA-WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
+ LC +DEA ++ M C PN +Y L+ ++ +MS+K
Sbjct: 299 LINGLCMYGLLDEARQMFYL-MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 397 VGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYE 456
G A+ TY +L++ C R A ++ QMS + P +YN L+ GLC G+ +
Sbjct: 358 -GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEK 416
Query: 457 AVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
A+M E M + I + + C L ++ + ++F L S
Sbjct: 417 ALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 150/369 (40%), Gaps = 52/369 (14%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P V+T T L + + ++ A+ +FN+ + + N Y +++ L GR G+
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSR--PNVVTYNALVTGLCEIGRWGDAA 243
Query: 66 DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIM 125
++ M + E F + I+ + G + EA L+ N ++Q+
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY---------------NVMIQMS 288
Query: 126 VSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN 185
V D V L+ LC G D A Q+F M+ GCYPN
Sbjct: 289 VYPD---------------------VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAI 245
Y L+ G C R+ + + Y M SQKG + + Y L+ C G+ + A
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEM----SQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP-SLSSYNAMAV 304
E+ +++ + R YN L C +G+ + +I E + K + ++ +Y +
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL--MIFEYMRKREMDINIVTYTIIIQ 441
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA---IKVIEEDMVAV 361
+ K+++A + + +G KP + ++ C+ + EA K ++ED
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED---- 497
Query: 362 NCLPNSEVY 370
LPN VY
Sbjct: 498 GFLPNESVY 506
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 127/309 (41%), Gaps = 7/309 (2%)
Query: 188 SYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEI 247
SY +++ H+ + ++A L F R+ I+ + LL + + +++ I +
Sbjct: 50 SYRKILRNGLHNLQFNDALDL----FTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105
Query: 248 LSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLY 307
++ G+ P C + + + + + G P L ++ ++
Sbjct: 106 FEQMQILGI-PPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 308 SESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNS 367
++I++A + ++ GFKP + + LCK ++ A+++ + M PN
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ-MGTNGSRPNV 223
Query: 368 EVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLE 427
YN L+ L +G L M K+ + T+ L++ + + +EA +L
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 428 QMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLE 487
M S +P +Y SLI GLC G EA M G P ++ +L FC +
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342
Query: 488 MMKASSEIF 496
++ +IF
Sbjct: 343 RVEDGMKIF 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 107/270 (39%), Gaps = 38/270 (14%)
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEA 287
YR +L + +F +A+++ ++++ + RL LS + + L +
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRL-LSVIAKMNRYDVVISLFEQM 109
Query: 288 LIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRV 347
I G P L + N + + S+ A + +M GF+P F + + C +R+
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 348 DEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYI 407
++AI + ++ + +G + TY
Sbjct: 170 EDAIALFDQIL-------------------------------------GMGFKPNVVTYT 192
Query: 408 ILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQ 467
L+ LC+ R A +L QM P +YN+L+ GLC +GR +A L DM+ +
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Query: 468 GKLPEISVWKSLASLFCNLEMMKASSEIFN 497
P + + +L F + + + E++N
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYN 282
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 210/449 (46%), Gaps = 17/449 (3%)
Query: 58 SGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQS 117
+ RL + VIE M + + +N G V A+ L + + + T +
Sbjct: 119 ANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVT 178
Query: 118 FNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
+N L++ + L + FV+ + + L+ A + +D A+++ E+
Sbjct: 179 YNALVRGLCMLGSLNQSLQ-FVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
+G PN SY +L+ G C +GR +A ++F + KG ++V Y LL LC
Sbjct: 238 IVKGGEPNLVSYNVLLTGFCKEGRTDDAM----ALFRELPAKGFKANVVSYNILLRCLCC 293
Query: 238 DGKFEEAIEILSKILRKGLKAPKR-CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP-- 294
DG++EEA +L++ + G +AP YN L S GR + + L + + KG+
Sbjct: 294 DGRWEEANSLLAE-MDGGDRAPSVVTYNILINSLAFHGRTEQALQVL--KEMSKGNHQFR 350
Query: 295 -SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV-SRVDEAIK 352
+ +SYN + L E K+D K + EM R KP + A + +LC+ S+V EA
Sbjct: 351 VTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFY 409
Query: 353 VIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEM 412
+I+ C + + Y ++ +L GN+ A + L +M++ G D TY L+
Sbjct: 410 IIQSLSNKQKCCTH-DFYKSVITSLCRKGNTFAAFQLLYEMTR-CGFDPDAHTYSALIRG 467
Query: 413 LCRERRYLEASQLLEQMS-IKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLP 471
LC E + A ++L M ++ P D++N++I GLC + R A+ E M+ + ++P
Sbjct: 468 LCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMP 527
Query: 472 EISVWKSLASLFCNLEMMKASSEIFNRLR 500
+ + L + + ++ + E+ + LR
Sbjct: 528 NETTYAILVEGIAHEDELELAKEVLDELR 556
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 170/431 (39%), Gaps = 60/431 (13%)
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
F + P+ + N + SF+ L ++ + AH L+Y LC
Sbjct: 76 FSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHS------------------TQLLYDLC 117
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
R A+++ + M G P+ +Y L+ LC G + A L+ M G
Sbjct: 118 KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKM----EDHGYP 173
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
+ V Y L+ LC G ++++ + ++++KGL Y+ L L R + +
Sbjct: 174 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFL-LEAAYKERGTDEAVK 232
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
L+ E ++KG P+L SYN + E + D+A + E+ +GFK + + LC
Sbjct: 233 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 292
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSK------- 395
R +EA ++ E M + P+ YNIL+ +L G + L+ L +MSK
Sbjct: 293 CDGRWEEANSLLAE-MDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRV 351
Query: 396 -------------KVG----------------CTADRETYIILLEMLCRERRYLEASQLL 426
K G C + TY + + + EA ++
Sbjct: 352 TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYII 411
Query: 427 EQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNL 486
+ +S K D Y S+I LC G + A L +M G P+ + +L C
Sbjct: 412 QSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLE 471
Query: 487 EMMKASSEIFN 497
M + E+ +
Sbjct: 472 GMFTGAMEVLS 482
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 79/196 (40%)
Query: 38 YPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVD 97
Y + N Y + S+ + ++ E +I+ + C + S I G
Sbjct: 381 YRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTF 440
Query: 98 EAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLL 157
A L + + +++ L++ + E A + K V N +
Sbjct: 441 AAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAM 500
Query: 158 MYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRIS 217
+ LC R+DLA+++F+ M + PN +YAIL++G+ H+ L A +L + R
Sbjct: 501 ILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKV 560
Query: 218 QKGNGEDIVVYRTLLD 233
N D +V + LD
Sbjct: 561 IGQNAVDRIVMQFNLD 576
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 214/485 (44%), Gaps = 38/485 (7%)
Query: 19 RTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGT-------------------SG 59
R + NP L IFN A S+ K+ + Y M+ IL SG
Sbjct: 79 RLRLNPEACLEIFNLA-SKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSG 137
Query: 60 RL--GEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQS 117
+ GE+ V ++ TVF + +YA GLV A+ +F N+ + + S
Sbjct: 138 FVVWGELVRVFKEF-----SFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLS 192
Query: 118 FNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
N+LL +V + A ++ D +EV V ++++ A C G D A+ +E
Sbjct: 193 CNSLLSNLVRKGENFVALHVY-DQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKET 251
Query: 178 DYQ-GCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
+ G N +Y L+ G G + T +L M S++G ++V Y +L+ C
Sbjct: 252 ESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLM----SERGVSRNVVTYTSLIKGYC 307
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSL 296
+ G EEA + + K L A + Y L C G+ + + +H+ +I+ V +
Sbjct: 308 KKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVR--VHDNMIEIGVRTN 365
Query: 297 SSYNAMAVDLYSES-KIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
++ ++ Y +S ++ EA+++ M D KP + V C+ VDEA+K+ +
Sbjct: 366 TTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCD 425
Query: 356 EDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCR 415
+ M +P YNILLK +G VL SL KM K G AD + LLE L +
Sbjct: 426 Q-MCQKEVVPTVMTYNILLKGYSRIGAFHDVL-SLWKMMLKRGVNADEISCSTLLEALFK 483
Query: 416 ERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISV 475
+ EA +L E + + + N +I GLC + + EA L+++ P +
Sbjct: 484 LGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQT 543
Query: 476 WKSLA 480
+++L+
Sbjct: 544 YQALS 548
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/547 (20%), Positives = 201/547 (36%), Gaps = 117/547 (21%)
Query: 42 THNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAIT 101
+ N Y ++I G + E V E +++ ++ ++ Y G + +A+
Sbjct: 293 SRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVR 352
Query: 102 LFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYAL 161
+ N+ + T N+L+ +L A +F W +K H N L+
Sbjct: 353 VHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIF-SRMNDWSLKPDHHTYNTLVDGY 411
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRIS-QKG 220
C G D AL++ +M + P +Y IL+KG G H+ L W++ ++G
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSL-----WKMMLKRG 466
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGL--------------------KAPK 260
D + TLL+AL + G F EA+++ +L +GL K
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 261 RCYNRLDLSQCSDGRDIEGTKRLIH---------EALI-------KGSVPSLSSYNAMAV 304
+ +++ +C ++ + L H EA KG P++ YN +
Sbjct: 527 EILDNVNIFRCKPA--VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS------------------- 345
+ +++ +++E++ RG PT A + A + C +
Sbjct: 585 GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Query: 346 ----------------RVDEAI----KVIEEDMV--------------AVNCL------- 364
++DEA K+++ D++ A CL
Sbjct: 645 NVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAE 704
Query: 365 ------------PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEM 412
PN+ VYN+ + L G + + + D TY IL+
Sbjct: 705 SVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHG 764
Query: 413 LCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
+A L ++M++K P +YN+LIKGLC LG A L + +G P
Sbjct: 765 CAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 824
Query: 473 ISVWKSL 479
+ +L
Sbjct: 825 AITYNTL 831
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 198/500 (39%), Gaps = 84/500 (16%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N + ++I+ SG+L E + +M S + + + ++ Y AG VDEA+ L
Sbjct: 365 NTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLC 424
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAH------------GLFVDN-SCG------ 144
+ Q V ++N LL+ R+ A H G+ D SC
Sbjct: 425 DQMCQKEVVPTVMTYNILLK---GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Query: 145 ------------WE------VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNR 186
WE + + LN+++ LC + + A +I ++ C P
Sbjct: 482 FKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV 541
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIE 246
+Y L G G L EA +++ + +KG I +Y TL+ + + +
Sbjct: 542 QTYQALSHGYYKVGNLKEA----FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
++ ++ +GL Y L C+ G I+ E + KG +++ + +A L
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGM-IDKAYATCFEMIEKGITLNVNICSKIANSL 656
Query: 307 YSESKIDEADKVIVEMQD-----RGFK--------------------------------- 328
+ KIDEA ++ ++ D G++
Sbjct: 657 FRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLV 716
Query: 329 PTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLE 388
P ++ +A LCK ++++A K+ + + + +P+ Y IL+ G+
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 389 SLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGL 448
++M+ K G + TY L++ LC+ A +LL ++ K P A +YN+LI GL
Sbjct: 777 LRDEMALK-GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Query: 449 CSLGRQYEAVMWLEDMISQG 468
G EA+ E MI +G
Sbjct: 836 VKSGNVAEAMRLKEKMIEKG 855
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 171/441 (38%), Gaps = 44/441 (9%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N Y ++I+ G + M V+ M + + S I Y GL++EA +F
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCG 163
+ + + V + L+ ++ A + DN V++ N L+ C
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVH-DNMIEIGVRTNTTICNSLINGYCK 378
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
G+ A QIF M+ P+ +Y L+ G C G + EA L M QK
Sbjct: 379 SGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM----CQKEVVP 434
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
++ Y LL G F + + + +L++G+ A D CS
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA--------DEISCST---------- 476
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCK 343
+ EAL K L +N EA K+ + RG ++ LCK
Sbjct: 477 LLEALFK-----LGDFN-------------EAMKLWENVLARGLLTDTITLNVMISGLCK 518
Query: 344 VSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADR 403
+ +V+EA K I +++ C P + Y L VGN M +K G
Sbjct: 519 MEKVNEA-KEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK-GIFPTI 576
Query: 404 ETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLED 463
E Y L+ + R + + L+ ++ + P +Y +LI G C++G +A +
Sbjct: 577 EMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFE 636
Query: 464 MISQGKLPEISVWKSLA-SLF 483
MI +G +++ +A SLF
Sbjct: 637 MIEKGITLNVNICSKIANSLF 657
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 144/337 (42%), Gaps = 17/337 (5%)
Query: 153 ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
++++ KG AL +F M G P+ S L+ L G A H+ M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 213 F-WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRK-GLKAPKRCYNRLDLSQ 270
+ +S D+ +++A C G ++A+ + GL+ YN L
Sbjct: 217 ISFEVSP-----DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGY 271
Query: 271 CSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
G D+EG R++ +G ++ +Y ++ + ++EA+ V ++++
Sbjct: 272 AMIG-DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVAD 330
Query: 331 RAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN---SAAVL 387
+ ++ + C+ ++ +A++V ++M+ + N+ + N L+ G + +
Sbjct: 331 QHMYGVLMDGYCRTGQIRDAVRV-HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIF 389
Query: 388 ESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKG 447
+N S K D TY L++ CR EA +L +QM K P +YN L+KG
Sbjct: 390 SRMNDWSLK----PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Query: 448 LCSLGRQYEAVMWLEDMISQG-KLPEISVWKSLASLF 483
+G ++ + + M+ +G EIS L +LF
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALF 482
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 118 FNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
+N + + +LE A LF D + +L++ G + A + EM
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
+G PN +Y L+KGLC G + A LL+ ++ QKG + + Y TL+D L +
Sbjct: 782 ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLH----KLPQKGITPNAITYNTLIDGLVK 837
Query: 238 DGKFEEAIEILSKILRKGL 256
G EA+ + K++ KGL
Sbjct: 838 SGNVAEAMRLKEKMIEKGL 856
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 338 VAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKV 397
V A C+ VD+A+ +E ++ N YN L+ +G+ + L MS++
Sbjct: 232 VNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER- 290
Query: 398 GCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEA 457
G + + TY L++ C++ EA + E + K Y L+ G C G+ +A
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 458 VMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
V ++MI G ++ SL + +C + + +IF+R+
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 187/438 (42%), Gaps = 18/438 (4%)
Query: 65 RDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQI 124
+ ++ +M K ++ I + + G++++A LF + + Q++ +L++
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 125 MVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA-----LCGKGRSDLALQIFQEMDY 179
E + + L V E+K R ++ Y +C G D A I +EM
Sbjct: 392 YCREKNVRQGYELLV------EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 180 QGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDG 239
GC PN Y L+K + R +A +L M ++G DI Y +L+ L +
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIAPDIFCYNSLIIGLSKAK 501
Query: 240 KFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSY 299
+ +EA L +++ GLK Y +S + + + + E G +P+
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAF-ISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 300 NAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMV 359
+ + + K+ EA M D+G + + L K +VD+A ++ E M
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE-MR 619
Query: 360 AVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRY 419
P+ Y +L+ +GN ++M ++ G T + Y +LL CR
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPNVIIYNMLLGGFCRSGEI 678
Query: 420 LEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
+A +LL++MS+K P A +Y ++I G C G EA ++M +G +P+ V+ +L
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 480 ASLFCNLEMMKASSEIFN 497
C L ++ + IF
Sbjct: 739 VDGCCRLNDVERAITIFG 756
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 197/446 (44%), Gaps = 17/446 (3%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N +Y T+I + R G+ V+++M++ + S I + A +DEA +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLMYALC 162
+ + ++ + + +A + CG + ++V L+ C
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV-LPNKVLCTGLI-NEYC 568
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
KG+ A ++ M QG + +Y +LM GL + ++ +A + F + KG
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI----FREMRGKGIA 624
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
D+ Y L++ + G ++A I +++ +GL YN L C G +IE K
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG-EIEKAKE 683
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSES-KIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
L+ E +KG P+ +Y + +D Y +S + EA ++ EM+ +G P ++ V
Sbjct: 684 LLDEMSVKGLHPNAVTYCTI-IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSK----KV 397
C+++ V+ AI + + C ++ +N L+ + G + E LN++ +
Sbjct: 743 CRLNDVERAITIFGTN--KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 398 GCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEA 457
G D TY I+++ LC+E A +L QM + P +Y SL+ G +GR+ E
Sbjct: 801 GKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 458 VMWLEDMISQGKLPEISVWKSLASLF 483
++ I+ G P+ ++ + + F
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAF 885
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 153/359 (42%), Gaps = 22/359 (6%)
Query: 152 HALNL--LMYALC-----GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHE 204
H +N+ MY C +G + A +F M G P +YA L++G C + + +
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 205 ATHLLYSMFWRISQKGNGEDIVV----YRTLLDALCEDGKFEEAIEILSKILRKGLKAPK 260
LL M R +IV+ Y T++ +C G + A I+ +++ G +
Sbjct: 401 GYELLVEMKKR--------NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 261 RCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIV 320
Y L + + R R++ E +G P + YN++ + L ++DEA +V
Sbjct: 453 VIYTTLIKTFLQNSR-FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 321 EMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNV 380
EM + G KP + A ++ + S A K ++E M LPN + L+
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE-MRECGVLPNKVLCTGLINEYCKK 570
Query: 381 GNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADS 440
G + M + G D +TY +L+ L + + +A ++ +M K P S
Sbjct: 571 GKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 441 YNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
Y LI G LG +A ++M+ +G P + ++ L FC ++ + E+ + +
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 174/413 (42%), Gaps = 15/413 (3%)
Query: 88 NIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEV 147
N A GLV E ++ NI + ++ + +M E +E A LF D +
Sbjct: 327 NADAAKGLVHEMVSHGINIKPY-------MYDCCICVMSKEGVMEKAKALF-DGMIASGL 378
Query: 148 KSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATH 207
+ A L+ C + ++ EM + + +Y ++KG+C G L A +
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 208 LLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLD 267
++ M G ++V+Y TL+ ++ +F +A+ +L ++ +G+ CYN L
Sbjct: 439 IVKEMI----ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 268 LSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
+ S + ++ + + E + G P+ +Y A S+ ADK + EM++ G
Sbjct: 495 IG-LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 328 KPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVL 387
P + + + CK +V EA MV L +++ Y +L+ L
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRS-MVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 388 ESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKG 447
E +M K G D +Y +L+ + +AS + ++M + P YN L+ G
Sbjct: 613 EIFREMRGK-GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 448 LCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
C G +A L++M +G P + ++ +C + + +F+ ++
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 161/425 (37%), Gaps = 70/425 (16%)
Query: 81 TVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD 140
+F + Y G ++EA+ +F + V LL ++ +RL+ LF D
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD----LFWD 207
Query: 141 NSCGW---EVKSRVHALNLLMYALCGKGRSDL---------------------ALQIFQE 176
G V V ++L+ A C G L AL++ +
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267
Query: 177 MDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
M +G P + +Y +L+ GLC RL +A LL M G D Y L+D L
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM----DSLGVSLDNHTYSLLIDGLL 323
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSL 296
+ + A ++ +++ G+ Y+ +G +E K L + G +P
Sbjct: 324 KGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV-MEKAKALFDGMIASGLIPQA 382
Query: 297 SSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+Y ++ E + + +++VEM+ R + + V +C +D A +++E
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442
Query: 357 DMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRE 416
M+A C PN +Y L++ +
Sbjct: 443 -MIASGCRPNVVIYTT------------------------------------LIKTFLQN 465
Query: 417 RRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVW 476
R+ +A ++L++M + P YNSLI GL R EA +L +M+ G P +
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 477 KSLAS 481
+ S
Sbjct: 526 GAFIS 530
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 149/312 (47%), Gaps = 13/312 (4%)
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
V+ N+L+ LC A+ + +EM P+ SY +++G C L +A L
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 211 SMFWRISQKGNG--EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDL 268
M KG+G +V + L+DA C+ GK +EA+ L ++ GL+A Y L
Sbjct: 202 EM------KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 269 SQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFK 328
C G +++ K L E L +G P +YN + ++ EA ++ M +RG +
Sbjct: 256 GFCDCG-ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 329 PTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLE 388
P + + LC V + EA++++ M+ + PN+ YNI++ L G A +E
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNL-MIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 389 SLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYW--PCADSYNSLIK 446
+ M KK D TY ILL LC + EAS+LL M S + P SYN+LI
Sbjct: 374 IVELM-KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Query: 447 GLCSLGRQYEAV 458
GLC R ++A+
Sbjct: 433 GLCKENRLHQAL 444
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 193/465 (41%), Gaps = 32/465 (6%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y T+I L + ++ +M+ C + I+ + AG +DEA+ K +
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF------VDNSCGWEVKSRVHALNLLMYAL 161
+ +L++ L+ LF D+ C N L+
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI-------TYNTLIRGF 292
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
C G+ A +IF+ M +G PN +Y L+ GLC G+ EA LL M +K
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI----EKDE 348
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
+ V Y +++ LC+DG +A+EI+ + ++ + YN L C+ G D++
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG-DLDEAS 407
Query: 282 RLIHEALIKGSV--PSLSSYNAMAVDLYSESKIDEADKV---IVEMQDRGFKPTRAIFEA 336
+L++ L S P + SYNA+ L E+++ +A + +VE G + T I
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG--NSAAVLESLNKMS 394
V++ E K I + + + NS+ Y ++ G N A L ++S
Sbjct: 468 STLKAGDVNKAMELWKQISDSKI----VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
+ D Y LL LC+E +A +L E+M + +P S+N +I G G
Sbjct: 524 ELQPSVFD---YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
A L M G P++ + L + F L + + F+++
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 204/494 (41%), Gaps = 41/494 (8%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
KAL + NE K ++ + +I +G++ E +++M+ E V+ S
Sbjct: 195 KALELANEMKGSGCSWSL--VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 86 AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF------- 138
I + + G +D LF + + ++NTL++ +L+ A +F
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 139 -----------VDNSCG-WEVKSRVHALNLLM---------------YALCGKGRSDLAL 171
+D CG + K + LNL++ LC G A+
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 172 QIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTL 231
+I + M + P+ +Y IL+ GLC G L EA+ LLY M S D++ Y L
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY--TDPDVISYNAL 430
Query: 232 LDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG 291
+ LC++ + +A++I ++ K L A R + L+ D+ L +
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEK-LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 292 SVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAI 351
V + +Y AM ++ A ++ +M+ +P+ + +++LCK +D+A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 352 KVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLE 411
++ EE M N P+ +NI++ G+ + L MS + G + D TY L+
Sbjct: 550 RLFEE-MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS-RAGLSPDLFTYSKLIN 607
Query: 412 MLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLP 471
+ EA ++M + P A +S++K S G + ++ ++ + +
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667
Query: 472 EISVWKSLASLFCN 485
+ + ++ CN
Sbjct: 668 DKELTCTVMDYMCN 681
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 131/301 (43%), Gaps = 18/301 (5%)
Query: 201 RLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPK 260
R HE L +S + ++ + + V LL+ + K A +L+ +L++G
Sbjct: 86 RNHE---LAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNV 142
Query: 261 RCYNRLDLSQCSDGRDIEGTK--RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKV 318
+N L C R++E K L+ E +P + SYN + ++++A ++
Sbjct: 143 YNHNILLKGLC---RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALEL 199
Query: 319 IVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLR 378
EM+ G + + + A CK ++DEA+ ++E M + + VY L++
Sbjct: 200 ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKE-MKFMGLEADLVVYTSLIRGFC 258
Query: 379 NVG----NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSY 434
+ G A E L + G + TY L+ C+ + EAS++ E M +
Sbjct: 259 DCGELDRGKALFDEVLER-----GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 435 WPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSE 494
P +Y LI GLC +G+ EA+ L MI + + P + + + C ++ + E
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 495 I 495
I
Sbjct: 374 I 374
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 208/494 (42%), Gaps = 78/494 (15%)
Query: 42 THNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAIT 101
+HN Y +I+ ++ ++ +M + E +S +N Y + + +A+
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 102 LFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYAL 161
L + + T +F TL+ HGLF+ N
Sbjct: 177 LVDQMVEMGYRPDTITFTTLI------------HGLFLHN-------------------- 204
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
++ A+ + M +GC PN +Y +++ GLC G + A +LL M
Sbjct: 205 ----KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM----EAAKI 256
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
++V+Y T++D+LC+ ++A+ + +++ KG++ Y+ L C+ R + +
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS- 315
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
RL+ + + + P++ ++NA+ E K+ EA+K+ EM R P + + +
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
C R+DEA K + E M++ +C PN YN L+ +E +MS++ G
Sbjct: 376 CMHDRLDEA-KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR-GLVG 433
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAV--- 458
+ TY L+ + R A + +QM P +YN+L+ GLC G+ +A+
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 459 ----------------MWLEDMISQGKL----------------PEISVWKSLASLFCNL 486
+ +E M GK+ P++ ++ ++ S FC
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 487 EMMKASSEIFNRLR 500
+ + + +F ++R
Sbjct: 554 GLKEEADALFRKMR 567
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 189/435 (43%), Gaps = 21/435 (4%)
Query: 46 PVYATMISILGT---SGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
P T+ S+L R+ + +++QM + F + I+ EA+ L
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
+ Q C ++ ++ + ++ A L ++ ++++ V + ++ +LC
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL-LNKMEAAKIEANVVIYSTVIDSLC 271
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
D AL +F EM+ +G PN +Y+ L+ LC+ R +A+ LL M I +K N
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM---IERKIN- 327
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
++V + L+DA ++GK EA ++ +++++ + Y+ L C R ++ K
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR-LDEAKH 386
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
+ + K P++ +YN + +IDE ++ EM RG + +
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN---SAAVLESL--NKMSKKV 397
+ D A V ++ MV+ PN YN LL L G + V E L +KM +
Sbjct: 447 QARDCDNAQMVFKQ-MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 398 GCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEA 457
TY I++E +C+ + + L +S+K P YN++I G C G + EA
Sbjct: 506 ------YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Query: 458 VMWLEDMISQGKLPE 472
M G LP+
Sbjct: 560 DALFRKMREDGPLPD 574
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 166/388 (42%), Gaps = 8/388 (2%)
Query: 96 VDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALN 155
+D+AI LF + + + FN LL + + + L + + ++ N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISL-GEKMQRLGISHNLYTYN 124
Query: 156 LLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWR 215
+L+ C + + LAL + +M G P+ + + L+ G CH R+ +A L+ M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-- 182
Query: 216 ISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR 275
+ G D + + TL+ L K EA+ ++ +++++G + Y + C G
Sbjct: 183 --EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG- 239
Query: 276 DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFE 335
DI+ L+++ ++ Y+ + L D+A + EM+++G +P +
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 336 AKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSK 395
+ ++ LC R +A +++ DM+ PN +N L+ G + ++M K
Sbjct: 300 SLISCLCNYERWSDASRLLS-DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 396 KVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQY 455
+ D TY L+ C R EA + E M K +P +YN+LI G C R
Sbjct: 359 R-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 456 EAVMWLEDMISQGKLPEISVWKSLASLF 483
E V +M +G + + +L F
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGF 445
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 173/397 (43%), Gaps = 23/397 (5%)
Query: 114 WTQSFNT-------LLQIMVSEDRLEAAHGLFVDNSCGWEVKSR----VHALNLLMYALC 162
W ++F++ +L+ + +L+ A GLF G VKSR + N L+ A+
Sbjct: 42 WGRAFSSGSGDYREILRNGLHSMKLDDAIGLF-----GGMVKSRPLPSIFEFNKLLSAIA 96
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
+ DL + + ++M G N +Y IL+ C ++ A LL M + G
Sbjct: 97 KMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM----KLGYE 152
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
IV +LL+ C + +A+ ++ +++ G + + L + E
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA- 211
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
L+ + +G P+L +Y + L ID A ++ +M+ + I+ + +LC
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTAD 402
K D+A+ + E M PN Y+ L+ L N + L+ M ++ +
Sbjct: 272 KYRHEDDALNLFTE-MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPN 329
Query: 403 RETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLE 462
T+ L++ +E + +EA +L ++M +S P +Y+SLI G C R EA E
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 463 DMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
MIS+ P + + +L + FC + + E+F +
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 134/306 (43%), Gaps = 14/306 (4%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
AL++F E +++ + N Y+++IS L R + ++ M + F +
Sbjct: 279 ALNLFTEMENKGVR--PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSC 143
I+ + G + EA L+ + + + ++++L+ DRL+ A +F + C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH 203
V + N L+ C R D +++F+EM +G N +Y L+ G
Sbjct: 397 FPNVVT----YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 204 EATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
A + F ++ G +I+ Y TLLD LC++GK E+A+ + + R ++ Y
Sbjct: 453 NAQMV----FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
N + C G+ +E L +KG P + YN M + +EAD + +M+
Sbjct: 509 NIMIEGMCKAGK-VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 324 DRGFKP 329
+ G P
Sbjct: 568 EDGPLP 573
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 181/447 (40%), Gaps = 81/447 (18%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
Y H+ Y MI + M D+I MR+ +T F + YA A VDEAI
Sbjct: 130 YEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVET-FCIVMRKYARAQKVDEAI 188
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
F + +++ +FN LL A
Sbjct: 189 YAFNVMEKYDLPPNLVAFNGLLS------------------------------------A 212
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
LC A ++F+ M + P+ +Y+IL++G + L +A + M G
Sbjct: 213 LCKSKNVRKAQEVFENMRDRFT-PDSKTYSILLEGWGKEPNLPKAREVFREMI----DAG 267
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
DIV Y ++D LC+ G+ +EA+ I+ +D S C
Sbjct: 268 CHPDIVTYSIMVDILCKAGRVDEALGIVRS---------------MDPSICK-------- 304
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
P+ Y+ + +E++++EA +EM+ G K A+F + + A
Sbjct: 305 -------------PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGA 351
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
CK +R+ +V++E M + PNS+ NI+L++L G + KM K C
Sbjct: 352 FCKANRMKNVYRVLKE-MKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK--VCE 408
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
D +TY ++++M C ++ A ++ + M K +P +++ LI GLC +A +
Sbjct: 409 PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVL 468
Query: 461 LEDMISQGKLPEISVWKSLASLFCNLE 487
LE+MI G P + L L E
Sbjct: 469 LEEMIEMGIRPSGVTFGRLRQLLIKEE 495
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 124/292 (42%), Gaps = 10/292 (3%)
Query: 22 KNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDT 81
KN KA +F + R+ T + Y+ ++ G L + R+V +M C
Sbjct: 217 KNVRKAQEVFENMRDRF---TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIV 273
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN 141
++ ++I AG VDEA+ + +++ C T ++ L+ +E+RLE A F++
Sbjct: 274 TYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEM 333
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
+K+ V N L+ A C R ++ +EM +G PN S I+++ L G
Sbjct: 334 ERSG-MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
EA + M K D Y ++ CE + E A ++ + +KG+
Sbjct: 393 KDEAFDVFRKMI-----KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMH 447
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKID 313
++ L C + R + L+ E + G PS ++ + L E + D
Sbjct: 448 TFSVLINGLCEE-RTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERED 498
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 3/191 (1%)
Query: 311 KIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVY 370
K+DEA M+ P F ++ALCK V +A +V E + P+S+ Y
Sbjct: 183 KVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN--MRDRFTPDSKTY 240
Query: 371 NILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMS 430
+ILL+ N E +M GC D TY I++++LC+ R EA ++ M
Sbjct: 241 SILLEGWGKEPNLPKAREVFREMID-AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMD 299
Query: 431 IKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMK 490
P Y+ L+ + R EAV +M G +++V+ SL FC MK
Sbjct: 300 PSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMK 359
Query: 491 ASSEIFNRLRS 501
+ ++S
Sbjct: 360 NVYRVLKEMKS 370
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 166/367 (45%), Gaps = 9/367 (2%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQE 176
+F +L+ +R+E A + V+ +K V ++ +LC G + AL +F +
Sbjct: 144 TFTSLINGFCLGNRMEEAMSM-VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 177 MDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
M+ G P+ Y L+ GLC+ GR +A LL M +++ D++ + L+DA
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM----TKRKIKPDVITFNALIDAFV 258
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSL 296
++GKF +A E+ ++++R + Y L C +G ++ +++ + KG P +
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC-VDEARQMFYLMETKGCFPDV 317
Query: 297 SSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+Y ++ K+D+A K+ EM +G + + +V + + A +V
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 357 DMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKV--GCTADRETYIILLEMLC 414
MV+ PN YN+LL L G L M K+ G + TY +LL LC
Sbjct: 378 -MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 415 RERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEIS 474
+ +A + E M + +Y +I+G+C G+ AV + S+G P +
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 475 VWKSLAS 481
+ ++ S
Sbjct: 497 TYTTMIS 503
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 147/339 (43%), Gaps = 12/339 (3%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+Y T+I L +G + + +QM ++ S +N N+G +A +L + +
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ +FN L+ V E + A L+ + + + L+ C +G
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELY-NEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
D A Q+F M+ +GC+P+ +Y L+ G C ++ +A + Y M SQKG + +
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM----SQKGLTGNTI 353
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y TL+ + GK A E+ S ++ +G+ R YN L C +G+ + +I E
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL--MIFE 411
Query: 287 ALIK----GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
+ K G P++ +YN + L K+++A V +M+ R + + +C
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
K +V A+ + + + PN Y ++ L G
Sbjct: 472 KAGKVKNAVNLFCS-LPSKGVKPNVVTYTTMISGLFREG 509
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 162/406 (39%), Gaps = 47/406 (11%)
Query: 97 DEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNL 156
+EA+ LF ++ + + F LL ++ + + L D+ V ++ NL
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL-CDHLQIMGVSHDLYTCNL 112
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
LM C + LA +M G P+ ++ L+ G C R+ EA SM ++
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM----SMVNQM 168
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR- 275
+ G D+V+Y T++D+LC++G A+ + ++ G++ Y L C+ GR
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 276 -DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
D + R + + IK P + ++NA+ E K +A+++ EM P +
Sbjct: 229 RDADSLLRGMTKRKIK---PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
+ + C VDEA + +
Sbjct: 286 TSLINGFCMEGCVDEA-------------------------------------RQMFYLM 308
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
+ GC D Y L+ C+ ++ +A ++ +MS K +Y +LI+G +G+
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
A M+S+G P I + L C +K + IF ++
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 144/333 (43%), Gaps = 7/333 (2%)
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
KG S AL + +D +Y +++ H + +EA L F + +
Sbjct: 15 KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDL----FTHMVESRPLP 70
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
I+ + LL+ + + KF+ I + + G+ N L C + +
Sbjct: 71 SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS-F 129
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCK 343
+ + + G P + ++ ++ ++++EA ++ +M + G KP ++ + +LCK
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 344 VSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADR 403
V+ A+ + ++ M P+ +Y L+ L N G L M+K+ D
Sbjct: 190 NGHVNYALSLFDQ-MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDV 247
Query: 404 ETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLED 463
T+ L++ +E ++L+A +L +M S P +Y SLI G C G EA
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 464 MISQGKLPEISVWKSLASLFCNLEMMKASSEIF 496
M ++G P++ + SL + FC + + + +IF
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y ++I+ G + E R + M C + S IN + VD+A+ +F +
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS 167
Q T ++ TL+Q + A +F + V + N+L++ LC G+
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVF-SHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 168 DLALQIFQEM---DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM------------ 212
AL IF++M + G PN +Y +L+ GLC++G+L +A + M
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 213 -------------------FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILR 253
F + KG ++V Y T++ L +G EA + K+
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Query: 254 KGL 256
G+
Sbjct: 524 DGV 526
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 131/336 (38%), Gaps = 42/336 (12%)
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
+ D+ + + + G + + +LM C + + A+ L M + G DI
Sbjct: 87 KFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM----KLGFEPDI 142
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
V + +L++ C + EEA+ ++++++ G+K Y + S C +G + L
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH-VNYALSLFD 201
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
+ G P + Y ++ L + + +AD ++ M R KP F A + A K
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
+ +A ++ E M+ ++ PN ++ T
Sbjct: 262 KFLDAEELYNE-MIRMSIAPN--IF----------------------------------T 284
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
Y L+ C E EA Q+ M K +P +Y SLI G C + +A+ +M
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 466 SQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
+G + +L F + + E+F+ + S
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 208/477 (43%), Gaps = 17/477 (3%)
Query: 26 KALHIFNEAKSR--YPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVF 83
K L +FN K YP +Y +I L R+ + + ++M +
Sbjct: 197 KGLELFNRMKHDRIYPSVF----IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252
Query: 84 ASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NS 142
+ I+ Y AG +++ + + + + +FNTLL+ + +E A + +
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 143 CGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRL 202
G+ + ++L +++ AL +++ G N + +IL+ LC +G++
Sbjct: 313 LGFVPDA--FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 203 HEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC 262
+A +L R KG + V+Y T++D C G A + + ++G+K
Sbjct: 371 EKAEEIL----GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 263 YNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM 322
YN L C G ++E ++ +++ +KG PS+ +YN + + + D+ ++ EM
Sbjct: 427 YNCLIRRFCELG-EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 323 QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN 382
+D G P + + LCK S++ EA ++++ DM P +YN+L+ + G
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEA-QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 383 SAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYN 442
+M KK G + TY L++ L + EA LL ++S K P +YN
Sbjct: 545 IEDAFRFSKEMLKK-GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 443 SLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
SLI G G + E+M G P + + L SL C E ++ + +F +
Sbjct: 604 SLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-CTKEGIELTERLFGEM 659
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 127/550 (23%), Positives = 219/550 (39%), Gaps = 78/550 (14%)
Query: 5 WPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEM 64
+P V L + K A +F+E +R + + Y T+I +G +
Sbjct: 211 YPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR--RLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 65 RDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQI 124
V E+M+ D E F + + AG+V++A + K + V +F+ L
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Query: 125 MVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYP 184
S ++ EAA G++ + + VK + ++L+ ALC +G+ + A +I +G P
Sbjct: 329 YSSNEKAEAALGVY-ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Query: 185 NRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEA 244
N Y ++ G C G L A + +M ++G D + Y L+ CE G+ E A
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAM----EKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK--RLIHEALIKGSVPSLSSYNAM 302
+ ++K+ KG+ YN L GR E K ++ E G++P++ SY +
Sbjct: 444 EKEVNKMKLKGVSPSVETYNIL---IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 303 AVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAI--------KVI 354
L SK+ EA V +M+DRG P I+ + C ++++A K I
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 355 EEDMVAVNCL--------------------------PNSEVYNILLKNLRNVGNSAAVLE 388
E ++V N L P+ YN L+ GN +
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 389 SLNKMSKKVGCTADRETYIILLEMLCRE------RRYLEAS------------------- 423
+M K+ G +TY +L+ + +E R + E S
Sbjct: 621 LYEEM-KRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHG 679
Query: 424 ------QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWK 477
L +QM KS +YNSLI G +G+ E +++M ++ PE +
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 478 SLASLFCNLE 487
+ C ++
Sbjct: 740 IIVKGHCEVK 749
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 146/340 (42%), Gaps = 21/340 (6%)
Query: 147 VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEAT 206
V V N+L+ K D I +EM+ G PN SY L+ LC +L EA
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 207 HLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL 266
+ M +G + +Y L+D C GK E+A ++L+KG++ YN L
Sbjct: 515 IVKRDM----EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 267 DLSQCSDGRDIEG----TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM 322
DG + G + L+ E KG P + +YN++ + + EM
Sbjct: 571 -----IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 323 QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN 382
+ G KPT + ++ LC E I++ E ++ P+ VYN +L G+
Sbjct: 626 KRSGIKPTLKTYHLLIS-LC----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGD 680
Query: 383 SAAVLESLNKM-SKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
+M K +G D+ TY L+ + + E L+++M+ + P AD+Y
Sbjct: 681 MEKAFNLQKQMIEKSIGL--DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Query: 442 NSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLAS 481
N ++KG C + A +W +M +G L ++ + L S
Sbjct: 739 NIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVS 778
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 192/456 (42%), Gaps = 28/456 (6%)
Query: 64 MRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQ 123
+R V R + + D+V A + +A E + + P N V + L +
Sbjct: 5 LRLVSRSSRYATVKFTDSVSACSCRRLFSASTDPEPESQPEQAPPTNPVTGDEKLRNL-R 63
Query: 124 IMVSEDRLEAAHGLFV-----DNSCGWEVKSRVHALNL------------LMYALCGKGR 166
+++ ++R+E A G+ D++ K A +L L+ L + +
Sbjct: 64 VLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESK 123
Query: 167 S-DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
A +F + +G YP+ DS +L+ L + + ++F I +
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFR----VTINVFLNILESDFRPSK 179
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
+Y + A + + +E+ +++ + YN L C G+ + ++L
Sbjct: 180 FMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCK-GKRMNDAEQLFD 238
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKIDEAD-KVIVEMQDRGFKPTRAIFEAKVAALCKV 344
E L + +PSL +YN + +D Y ++ E KV M+ +P+ F + L K
Sbjct: 239 EMLARRLLPSLITYNTL-IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKA 297
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
V++A V++E M + +P++ ++IL + + A L + + + G +
Sbjct: 298 GMVEDAENVLKE-MKDLGFVPDAFTFSILFDGYSSNEKAEAAL-GVYETAVDSGVKMNAY 355
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
T ILL LC+E + +A ++L + K P YN++I G C G A M +E M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 465 ISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
QG P+ + L FC L M+ + + N+++
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 107/274 (39%), Gaps = 25/274 (9%)
Query: 232 LDALCEDGKFEEAIEILSKILRKG---LKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
L L + + E A +LS +LR +PK ++ LS S D
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDF----------- 110
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
SY ++V L I EA + +++ G P+ + L K +
Sbjct: 111 ---------SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFR 161
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
I V +++ + P+ +Y ++ + + LE N+M K Y +
Sbjct: 162 VTINVFL-NILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM-KHDRIYPSVFIYNV 219
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
L++ LC+ +R +A QL ++M + P +YN+LI G C G ++ E M +
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 469 KLPEISVWKSLASLFCNLEMMKASSEIFNRLRSL 502
P + + +L M++ + + ++ L
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 160/355 (45%), Gaps = 7/355 (1%)
Query: 145 WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHE 204
+ + +++ +L++ C R AL + +M G P+ ++ L+ G C R+ +
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 205 ATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN 264
A +S+ + + G ++VVY TL+D LC++G+ A+E+L+++ +KGL A YN
Sbjct: 160 A----FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 265 RLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQD 324
L C GR R++ + + + P + ++ A+ + +DEA ++ EM
Sbjct: 216 TLLTGLCYSGR-WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 325 RGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSA 384
P + + + LC R+ +A K + M + C PN YN L+
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL-MASKGCFPNVVTYNTLISGFCKFRMVD 333
Query: 385 AVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSL 444
++ +MS + G AD TY L+ C+ + A + M + P ++ L
Sbjct: 334 EGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL 392
Query: 445 IKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+ GLC G A++ +DM K I + + C + ++ + E+F RL
Sbjct: 393 LHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRL 447
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 16/356 (4%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDN-SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQ 175
+F +LL +R+ A L + G+E V+ N L+ LC G ++AL++
Sbjct: 143 TFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY--NTLIDGLCKNGELNIALELLN 200
Query: 176 EMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDAL 235
EM+ +G + +Y L+ GLC+ GR +A +L M ++ D+V + L+D
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM----KRSINPDVVTFTALIDVF 256
Query: 236 CEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPS 295
+ G +EA E+ ++++ + YN + C GR + K+ KG P+
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR-LYDAKKTFDLMASKGCFPN 315
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
+ +YN + +DE K+ M GF + + C+V ++ A+ +
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFC 375
Query: 356 EDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKM---SKKVGCTADRETYIILLEM 412
MV+ P+ + ILL L G + L + M K +G A Y I++
Sbjct: 376 W-MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA----YNIMIHG 430
Query: 413 LCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
LC+ + +A +L ++ ++ P A +Y +I GLC G + EA + M +G
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 7/308 (2%)
Query: 192 LMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKI 251
L G H R +A +++F+ + IV + LL A ++E I K+
Sbjct: 42 LRTGFLHSIRFEDA----FALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM 97
Query: 252 LRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK 311
G+ + L C R + ++ + + G PS+ ++ ++ ++
Sbjct: 98 ELYGISHDLYSFTILIHCFCRCSR-LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 312 IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
I +A +++ M G++P ++ + LCK ++ A++++ E M + YN
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE-MEKKGLGADVVTYN 215
Query: 372 ILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSI 431
LL L G + L M K+ D T+ L+++ ++ EA +L ++M
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 432 KSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKA 491
S P +YNS+I GLC GR Y+A + M S+G P + + +L S FC M+
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 492 SSEIFNRL 499
++F R+
Sbjct: 335 GMKLFQRM 342
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 129/324 (39%), Gaps = 46/324 (14%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y T+++ L SGR + ++ M + S F + I+++ G +DEA L+K +
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS 167
Q + ++N+++ LC GR
Sbjct: 274 QSSVDPNNVTYNSIIN------------------------------------GLCMHGRL 297
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVV 227
A + F M +GC+PN +Y L+ G C + E L F R+S +G DI
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL----FQRMSCEGFNADIFT 353
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEA 287
Y TL+ C+ GK A++I ++ + + + L C +G +IE +
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG-EIESALVKFDDM 412
Query: 288 LIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS-- 345
+ +YN M L K+++A ++ + G KP + + LCK
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472
Query: 346 -RVDEAIKVIEEDMVAVNCLPNSE 368
DE I+ ++E+ + C N+E
Sbjct: 473 READELIRRMKEE--GIICQMNAE 494
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 23/259 (8%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P V+T T L + Q N +A ++ E N Y ++I+ L GRL + +
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQ--SSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 66 DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP--QFNCVNWTQSFNTLLQ 123
+ M C + + I+ + +VDE + LF+ + FN +T +NTL+
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT--YNTLIH 359
Query: 124 IMVSEDRLEAAHGLFVDNSCGWEVKSRV------HALNLLMYALCGKGRSDLALQIFQEM 177
+L A +F W V RV H +L++ LC G + AL F +M
Sbjct: 360 GYCQVGKLRVALDIFC-----WMVSRRVTPDIITHC--ILLHGLCVNGEIESALVKFDDM 412
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
Y +Y I++ GLC ++ +A + +F R+ +G D Y ++ LC+
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKA----WELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 238 DGKFEEAIEILSKILRKGL 256
+G EA E++ ++ +G+
Sbjct: 469 NGPRREADELIRRMKEEGI 487
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 210/495 (42%), Gaps = 63/495 (12%)
Query: 14 LSQIIRTQKNPMKALHIFN--EAKSRYPK--YTHNGPVYATMISILGTSGRLGEMRDVIE 69
L+ ++R + +P A+ +F + +S PK + ++ Y +I+ LG S E+ V+
Sbjct: 12 LASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLL 71
Query: 70 QMRQDS-CECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLL------ 122
++ D+ + +F + IN + L A+ +F +PQ+ C +S N+LL
Sbjct: 72 HLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKC 131
Query: 123 -QIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQG 181
++ ++RL + ++C + N+L++ G D AL++F EM +
Sbjct: 132 GELEKMKERLSSIDEFGKPDACTY---------NILIHGCSQSGCFDDALKLFDEMVKKK 182
Query: 182 CYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF 241
P ++ L+ GLC D R+ EA + + M + G + +Y +L+ ALC+ G+
Sbjct: 183 VKPTGVTFGTLIHGLCKDSRVKEALKMKHDM---LKVYGVRPTVHIYASLIKALCQIGEL 239
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNA 301
A ++ + +K Y+ L S GR E ++ E KG P +YN
Sbjct: 240 SFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNE-VSMILEEMSEKGCKPDTVTYNV 298
Query: 302 MAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAV 361
+ E+ + A++V+ EM ++G KP + + ++ + +EA + EDM
Sbjct: 299 LINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLF-EDMPRR 357
Query: 362 NCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLE 421
C P D +Y I+ + LC ++ E
Sbjct: 358 GCSP------------------------------------DTLSYRIVFDGLCEGLQFEE 381
Query: 422 ASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLAS 481
A+ +L++M K Y P D ++ LC G+ E + + + +G + VW +
Sbjct: 382 AAVILDEMLFKGYKPRRDRLEGFLQKLCESGK-LEILSKVISSLHRGIAGDADVWSVMIP 440
Query: 482 LFCNLEMMKASSEIF 496
C ++ S ++
Sbjct: 441 TMCKEPVISDSIDLL 455
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 12/340 (3%)
Query: 163 GKGR-SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
G+G+ AL +F EM C S L+ L G L + L S I + G
Sbjct: 94 GRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSS----IDEFGK 149
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
D Y L+ + G F++A+++ ++++K +K + L C D R E K
Sbjct: 150 -PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 282 RLIHEAL-IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+ H+ L + G P++ Y ++ L ++ A K+ E + K AI+ +++
Sbjct: 209 -MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
L K R +E + +I E+M C P++ YN+L+ +S + L++M +K G
Sbjct: 268 LIKAGRSNE-VSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEK-GLK 325
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQY-EAVM 459
D +Y ++L + R +++ EA+ L E M + P SY + GLC G Q+ EA +
Sbjct: 326 PDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCE-GLQFEEAAV 384
Query: 460 WLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
L++M+ +G P + C ++ S++ + L
Sbjct: 385 ILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL 424
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 202/484 (41%), Gaps = 47/484 (9%)
Query: 24 PMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIE-QMRQDSCECKDTV 82
P +++ F + S P + Y + L E + +IE + + +V
Sbjct: 97 PQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSV 156
Query: 83 FASAINI----------------YANAGLVDEAITLFK-------NIPQFNCVNWTQSFN 119
F S + + Y + G + +AI F+ ++P C N
Sbjct: 157 FISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGN------ 210
Query: 120 TLLQIMVSEDRLEAAHGLFVDN-SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMD 178
LL M+ + G +++ G+ + V+ N+LM C +G A ++F E+
Sbjct: 211 -LLDRMMKLNPTGTIWGFYMEILDAGFPLN--VYVFNILMNKFCKEGNISDAQKVFDEIT 267
Query: 179 YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCED 238
+ P S+ L+ G C G L E L + M + D+ Y L++ALC++
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM----EKSRTRPDVFTYSALINALCKE 323
Query: 239 GKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSS 298
K + A + ++ ++GL + L +G +I+ K + L KG P +
Sbjct: 324 NKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG-EIDLMKESYQKMLSKGLQPDIVL 382
Query: 299 YNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV---IE 355
YN + + A ++ M RG +P + + + C+ V+ A+++ ++
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 356 EDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCR 415
++ + ++ + S + + K R + A+ E L + G D TY ++++ C+
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREML-----RAGIKPDDVTYTMMMDAFCK 497
Query: 416 ERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISV 475
+ +LL++M + P +YN L+ GLC LG+ A M L+ M++ G +P+
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDIT 557
Query: 476 WKSL 479
+ +L
Sbjct: 558 YNTL 561
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 144/330 (43%), Gaps = 8/330 (2%)
Query: 118 FNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
FN L+ E + A +F D ++ V + N L+ C G D ++ +M
Sbjct: 243 FNILMNKFCKEGNISDAQKVF-DEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
+ P+ +Y+ L+ LC + ++ A + +F + ++G + V++ TL+
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGA----HGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 238 DGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLS 297
+G+ + E K+L KGL+ YN L C +G D+ + ++ + +G P
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNG-DLVAARNIVDGMIRRGLRPDKI 416
Query: 298 SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEED 357
+Y + ++ A ++ EM G + R F A V +CK RV +A + + E
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE- 475
Query: 358 MVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRER 417
M+ P+ Y +++ G++ + L +M G TY +LL LC+
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD-GHVPSVVTYNVLLNGLCKLG 534
Query: 418 RYLEASQLLEQMSIKSYWPCADSYNSLIKG 447
+ A LL+ M P +YN+L++G
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 125/279 (44%), Gaps = 3/279 (1%)
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR 265
T ++ + I G ++ V+ L++ C++G +A ++ +I ++ L+ +N
Sbjct: 221 TGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNT 280
Query: 266 LDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDR 325
L C G EG RL H+ + P + +Y+A+ L E+K+D A + EM R
Sbjct: 281 LINGYCKVGNLDEGF-RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR 339
Query: 326 GFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAA 385
G P IF + + +D +K + M++ P+ +YN L+ G+ A
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEID-LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 386 VLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
++ M ++ G D+ TY L++ CR A ++ ++M +++L+
Sbjct: 399 ARNIVDGMIRR-GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 446 KGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
G+C GR +A L +M+ G P+ + + FC
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC 496
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 83/210 (39%), Gaps = 2/210 (0%)
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
E L G ++ +N + E I +A KV E+ R +PT F + CKV
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
+DE + ++ M P+ Y+ L+ L ++M K+ G +
Sbjct: 290 NLDEGFR-LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR-GLIPNDVI 347
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
+ L+ R + ++M K P YN+L+ G C G A ++ MI
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 466 SQGKLPEISVWKSLASLFCNLEMMKASSEI 495
+G P+ + +L FC ++ + EI
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEI 437
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 190/440 (43%), Gaps = 14/440 (3%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N Y +I L GR+ E + Q+ + E ++S I+ + G + L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCG 163
+++ + + L+ + + + A V G ++ V N L+ C
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV-KMLGQSIRLNVVVFNSLIDGWCR 508
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
R D AL++F+ M G P+ ++ +M+ +GRL EA L + MF + G
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF----KMGLEP 564
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLD--LSQCSDGRDIEGTK 281
D + Y TL+DA C+ K +++ + R + A N + L +C IE
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC---HRIEDAS 621
Query: 282 RLIHEALIKGSV-PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+ + LI+G + P + +YN M S ++DEA+++ ++ F P +
Sbjct: 622 KFFNN-LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
LCK + +D AI++ M PN+ Y L+ + + +M +K G +
Sbjct: 681 LCKNNDMDGAIRMFSI-MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GIS 738
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
+Y I+++ LC+ R EA+ + Q P +Y LI+G C +GR EA +
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 798
Query: 461 LEDMISQGKLPEISVWKSLA 480
E M+ G P+ + ++L+
Sbjct: 799 YEHMLRNGVKPDDLLQRALS 818
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/491 (20%), Positives = 198/491 (40%), Gaps = 51/491 (10%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y+T+I +G LG + Q + VF+S I++Y +G + A ++K +
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN-SCGWEVKSRVHALNLLMYALCGKGR 166
++ L++ + + R+ A G++ G E ++ + + CG R
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG--ED 224
S AL +++M G P+ Y +L+ GL G +L++M + + G +
Sbjct: 444 SGFAL--YEDMIKMGYPPDVVIYGVLVDGLSKQGL------MLHAMRFSVKMLGQSIRLN 495
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
+VV+ +L+D C +F+EA+++ + G+K + + +GR +E L
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR-LEEALFLF 554
Query: 285 HEALIKGSVPSLSSY-------------------------NAMAVD----------LYSE 309
G P +Y N ++ D L+
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 310 SKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL-PNSE 368
+I++A K + + +P + + C + R+DEA ++ E ++ V PN+
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE--LLKVTPFGPNTV 672
Query: 369 VYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQ 428
IL+ L + + + M++K G + TY L++ + + +L E+
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731
Query: 429 MSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEM 488
M K P SY+ +I GLC GR EA I LP++ + L +C +
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791
Query: 489 MKASSEIFNRL 499
+ ++ ++ +
Sbjct: 792 LVEAALLYEHM 802
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 152/377 (40%), Gaps = 38/377 (10%)
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYS----- 211
L+ C +G D A +F+ M+ +G P+ +Y+ L+ G G L H L+S
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG-HKLFSQALHK 350
Query: 212 ---------------------------MFWRISQKGNGEDIVVYRTLLDALCEDGKFEEA 244
++ R+ +G ++V Y L+ LC+DG+ EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIK-GSVPSLSSYNAMA 303
+ +IL++G++ Y+ L C G G ++E +IK G P + Y +
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA--LYEDMIKMGYPPDVVIYGVLV 468
Query: 304 VDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
L + + A + V+M + + +F + + C+++R DEA+KV M
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL-MGIYGI 527
Query: 364 LPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
P+ + +++ G L +M K +G D Y L++ C+ +
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALAYCTLIDAFCKHMKPTIGL 586
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
QL + M N +I L R +A + ++I P+I + ++ +
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646
Query: 484 CNLEMMKASSEIFNRLR 500
C+L + + IF L+
Sbjct: 647 CSLRRLDEAERIFELLK 663
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 160/406 (39%), Gaps = 39/406 (9%)
Query: 79 KDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF 138
KD F + ++ G+ D A +F + N + FN L G
Sbjct: 98 KDPSFYTIAHVLIRNGMFDVADKVFDEM----ITNRGKDFNVL--------------GSI 139
Query: 139 VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
D S +V LM C G D AL+IF G +DS ++ L
Sbjct: 140 RDRSLDADV------CKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG 193
Query: 199 DGRLHEATHLLYSMFWRISQKG-NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
R+ L+ F ++ + G + + +LDAL G+ +A++ ++ +G +
Sbjct: 194 SDRVD----LIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFR 249
Query: 258 APKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADK 317
N++ D IE RL+ L G P++ ++ + ++D A
Sbjct: 250 VGIVSCNKVLKGLSVD--QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFD 307
Query: 318 VIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDM---VAVNCLPNSEVYNILL 374
+ M+ RG +P + + K + K+ + + V ++ + S ++ +
Sbjct: 308 LFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYV 367
Query: 375 KNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSY 434
K+ G+ A +M + G + + TY IL++ LC++ R EA + Q+ +
Sbjct: 368 KS----GDLATASVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 435 WPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLA 480
P +Y+SLI G C G EDMI G P++ ++ L
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 184/447 (41%), Gaps = 81/447 (18%)
Query: 36 SRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCE-CKDTVFASAINIYANAG 94
++ P Y H+ V +M+ IL + G + +IE+MR+ + E + +F + +A+A
Sbjct: 122 TKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASAN 181
Query: 95 LVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHAL 154
+V +A+ + +P++ GL D +
Sbjct: 182 MVKKAVEVLDEMPKY--------------------------GLEPDE----------YVF 205
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
L+ ALC G A ++F++M + PN + L+ G C +G+L EA +L M
Sbjct: 206 GCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQM-- 262
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
+ G DIVV+ LL GK +A ++++ + ++G + CY L + C
Sbjct: 263 --KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR-- 318
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
+E ++DEA +V VEM+ G + +
Sbjct: 319 ---------------------------------TEKRMDEAMRVFVEMERYGCEADIVTY 345
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
A ++ CK +D+ V+ +DM +P+ Y ++ LE + KM
Sbjct: 346 TALISGFCKWGMIDKGYSVL-DDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM- 403
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
K+ GC D Y +++ + C+ EA +L +M P D++ +I G S G
Sbjct: 404 KRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFL 463
Query: 455 YEAVMWLEDMISQGKL--PEISVWKSL 479
EA ++M+S+G P+ KSL
Sbjct: 464 IEACNHFKEMVSRGIFSAPQYGTLKSL 490
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 129/308 (41%), Gaps = 57/308 (18%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
+A +F + + ++P N + +++ G+L E ++V+ QM++ E VF +
Sbjct: 220 EASKVFEDMREKFPP---NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTN 276
Query: 86 AINIYANAGLVDEAITLFKNI------PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFV 139
++ YA+AG + +A L ++ P NC + L+Q
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNC------YTVLIQ---------------- 314
Query: 140 DNSCGWEVKSRVHALNLLMYALC-GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
ALC + R D A+++F EM+ GC + +Y L+ G C
Sbjct: 315 --------------------ALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 199 DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA 258
G + + YS+ + +KG V Y ++ A + +FEE +E++ K+ R+G
Sbjct: 355 WGMIDKG----YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP 410
Query: 259 PKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKV 318
YN + C G +++ RL +E G P + ++ M S+ + EA
Sbjct: 411 DLLIYNVVIRLACKLG-EVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNH 469
Query: 319 IVEMQDRG 326
EM RG
Sbjct: 470 FKEMVSRG 477
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 121/261 (46%), Gaps = 5/261 (1%)
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNA 301
++A+E+L ++ + GL+ + + L + C +G E +K + E + + P+L + +
Sbjct: 184 KKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASK--VFEDMREKFPPNLRYFTS 241
Query: 302 MAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAV 361
+ E K+ EA +V+V+M++ G +P +F ++ ++ +A ++ DM
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMN-DMRKR 300
Query: 362 NCLPNSEVYNILLKNL-RNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYL 420
PN Y +L++ L R + +M ++ GC AD TY L+ C+
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM-ERYGCEADIVTYTALISGFCKWGMID 359
Query: 421 EASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLA 480
+ +L+ M K P +Y ++ + E + +E M +G P++ ++ +
Sbjct: 360 KGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVI 419
Query: 481 SLFCNLEMMKASSEIFNRLRS 501
L C L +K + ++N + +
Sbjct: 420 RLACKLGEVKEAVRLWNEMEA 440
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
Query: 326 GFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAA 385
G+ + + ++ V L K+ + +IEE L E++ +L++ +
Sbjct: 126 GYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKK 185
Query: 386 VLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
+E L++M K G D + LL+ LC+ EAS++ E M K + P + SL+
Sbjct: 186 AVEVLDEMPK-YGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLL 243
Query: 446 KGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
G C G+ EA L M G P+I V+ +L S + + M + ++ N +R
Sbjct: 244 YGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR 298
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 176/400 (44%), Gaps = 45/400 (11%)
Query: 12 TYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQM 71
TY+ + + + KA+ + A R + G + + MIS LG G++ + + E
Sbjct: 200 TYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETA 259
Query: 72 RQDSCECKDTVFASAINIYANAGLVDEAITLFK---------NIPQFNCV---------- 112
F++ I+ Y +GL +EAI++F N+ +N V
Sbjct: 260 FAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME 319
Query: 113 -------------NWTQ----SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALN 155
N Q +FN+LL + EAA LF D ++ V + N
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLF-DEMTNRRIEQDVFSYN 378
Query: 156 LLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWR 215
L+ A+C G+ DLA +I +M + PN SY+ ++ G GR EA +L F
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL----FGE 434
Query: 216 ISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR 275
+ G D V Y TLL + G+ EEA++IL ++ G+K YN L G+
Sbjct: 435 MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 276 DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKI-DEADKVIVEMQDRGFKPTRAIF 334
E K++ E + +P+L +Y+ + +D YS+ + EA ++ E + G + ++
Sbjct: 495 YDE-VKKVFTEMKREHVLPNLLTYSTL-IDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILL 374
A + ALCK V A+ +I+E M PN YN ++
Sbjct: 553 SALIDALCKNGLVGSAVSLIDE-MTKEGISPNVVTYNSII 591
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 115/282 (40%), Gaps = 2/282 (0%)
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
G G + + L+ A G EEAI + + + GL+ YN + + G + +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
+ E G P ++N++ + A + EM +R + + +
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
A+CK ++D A +++ + M +PN Y+ ++ G L +M + +G
Sbjct: 383 AICKGGQMDLAFEILAQ-MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM-RYLGI 440
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVM 459
DR +Y LL + + R EA +L +M+ +YN+L+ G G+ E
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 460 WLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
+M + LP + + +L + + K + EIF +S
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKS 542
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 3/223 (1%)
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKI-DEADKVIVEMQDRGFKPTRAIFEAKVA 339
KR+ A G ++ +++A+ + Y S + +EA V M++ G +P + A +
Sbjct: 253 KRIFETAFAGGYGNTVYAFSAL-ISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
A K + + ++M P+ +N LL G A ++M+ +
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR-I 370
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVM 459
D +Y LL+ +C+ + A ++L QM +K P SY+++I G GR EA+
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 460 WLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRSL 502
+M G + + +L S++ + + + +I + S+
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 185/427 (43%), Gaps = 50/427 (11%)
Query: 67 VIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
+ E M+ D + + ++ +A G + A L + F N+LL +V
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLV 182
Query: 127 SEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNR 186
DR+E A LF D ++ + N+L+ LCG G+++ AL++ M GC P+
Sbjct: 183 KLDRVEDAMKLF-DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDI 241
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN--GEDIVVYRTLLDALCEDGKFEEA 244
+Y L++G C L++A+ + ++ + G+ D+V Y +++ C+ GK EA
Sbjct: 242 VTYNTLIQGFCKSNELNKASEM-----FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAV 304
+L +LR G+ P+ ++N + V
Sbjct: 297 SSLLDDMLRLGI------------------------------------YPTNVTFNVL-V 319
Query: 305 DLYSES-KIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
D Y+++ ++ A+++ +M G P F + + C+V +V + ++ EE M A
Sbjct: 320 DGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE-MNARGM 378
Query: 364 LPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
PN+ Y+IL+ L N E L +++ K Y +++ C+ + EA+
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
++E+M K P ++ LI G C GR +EAV M++ G P+ SL S
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Query: 484 CNLEMMK 490
M K
Sbjct: 498 LKAGMAK 504
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 155/379 (40%), Gaps = 35/379 (9%)
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
NLL +LC G DLA Q+F+ M G PN L+ G+LH AT LL F
Sbjct: 107 NLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE 166
Query: 215 -------------------RISQK----------GNGEDIVVYRTLLDALCEDGKFEEAI 245
R+ + D + L+ LC GK E+A+
Sbjct: 167 VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKAL 226
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV--PSLSSYNAMA 303
E+L + G + YN L C + ++ + + + GSV P + +Y +M
Sbjct: 227 ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE--MFKDVKSGSVCSPDVVTYTSMI 284
Query: 304 VDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
K+ EA ++ +M G PT F V K + A + I M++ C
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA-EEIRGKMISFGC 343
Query: 364 LPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
P+ + L+ VG + +M+ + G + TY IL+ LC E R L+A
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFPNAFTYSILINALCNENRLLKAR 402
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
+LL Q++ K P YN +I G C G+ EA + +E+M + P+ + L
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 484 CNLEMMKASSEIFNRLRSL 502
C M + IF+++ ++
Sbjct: 463 CMKGRMFEAVSIFHKMVAI 481
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 116/289 (40%), Gaps = 42/289 (14%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P ++T L Q KA +F + KS + + Y +MIS +G++ E
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSG-SVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 66 DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIM 125
+++ M + + F ++ YA AG + A + + F C +F +L+
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID-- 355
Query: 126 VSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN 185
C G+ ++++EM+ +G +PN
Sbjct: 356 ----------------------------------GYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAI 245
+Y+IL+ LC++ RL +A LL +++ K +Y ++D C+ GK EA
Sbjct: 382 AFTYSILINALCNENRLLKARELL----GQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP 294
I+ ++ +K K K + L + C GR E + H+ + G P
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS-IFHKMVAIGCSP 485
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 112/275 (40%), Gaps = 8/275 (2%)
Query: 213 FWRISQ-KGN-GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQ 270
FW S+ K N Y L +LC+ G + A ++ + G+ R L S
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148
Query: 271 CSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE-MQDRGFKP 329
G+ T L+ ++G ++S V L ++++A K+ E ++ +
Sbjct: 149 AEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKL---DRVEDAMKLFDEHLRFQSCND 205
Query: 330 TRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLES 389
T+ F + LC V + ++A++++ M C P+ YN L++ E
Sbjct: 206 TKT-FNILIRGLCGVGKAEKALELLGV-MSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 390 LNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLC 449
+ C+ D TY ++ C+ + EAS LL+ M +P ++N L+ G
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 450 SLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
G A MIS G P++ + SL +C
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 185/427 (43%), Gaps = 50/427 (11%)
Query: 67 VIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
+ E M+ D + + ++ +A G + A L + F N+LL +V
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLV 182
Query: 127 SEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNR 186
DR+E A LF D ++ + N+L+ LCG G+++ AL++ M GC P+
Sbjct: 183 KLDRVEDAMKLF-DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDI 241
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN--GEDIVVYRTLLDALCEDGKFEEA 244
+Y L++G C L++A+ + ++ + G+ D+V Y +++ C+ GK EA
Sbjct: 242 VTYNTLIQGFCKSNELNKASEM-----FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAV 304
+L +LR G+ P+ ++N + V
Sbjct: 297 SSLLDDMLRLGI------------------------------------YPTNVTFNVL-V 319
Query: 305 DLYSES-KIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
D Y+++ ++ A+++ +M G P F + + C+V +V + ++ EE M A
Sbjct: 320 DGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE-MNARGM 378
Query: 364 LPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
PN+ Y+IL+ L N E L +++ K Y +++ C+ + EA+
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
++E+M K P ++ LI G C GR +EAV M++ G P+ SL S
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Query: 484 CNLEMMK 490
M K
Sbjct: 498 LKAGMAK 504
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 155/379 (40%), Gaps = 35/379 (9%)
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
NLL +LC G DLA Q+F+ M G PN L+ G+LH AT LL F
Sbjct: 107 NLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE 166
Query: 215 -------------------RISQK----------GNGEDIVVYRTLLDALCEDGKFEEAI 245
R+ + D + L+ LC GK E+A+
Sbjct: 167 VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKAL 226
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV--PSLSSYNAMA 303
E+L + G + YN L C + ++ + + + GSV P + +Y +M
Sbjct: 227 ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE--MFKDVKSGSVCSPDVVTYTSMI 284
Query: 304 VDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
K+ EA ++ +M G PT F V K + A + I M++ C
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA-EEIRGKMISFGC 343
Query: 364 LPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
P+ + L+ VG + +M+ + G + TY IL+ LC E R L+A
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFPNAFTYSILINALCNENRLLKAR 402
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
+LL Q++ K P YN +I G C G+ EA + +E+M + P+ + L
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 484 CNLEMMKASSEIFNRLRSL 502
C M + IF+++ ++
Sbjct: 463 CMKGRMFEAVSIFHKMVAI 481
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 116/289 (40%), Gaps = 42/289 (14%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P ++T L Q KA +F + KS + + Y +MIS +G++ E
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSG-SVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 66 DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIM 125
+++ M + + F ++ YA AG + A + + F C +F +L+
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID-- 355
Query: 126 VSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN 185
C G+ ++++EM+ +G +PN
Sbjct: 356 ----------------------------------GYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAI 245
+Y+IL+ LC++ RL +A LL +++ K +Y ++D C+ GK EA
Sbjct: 382 AFTYSILINALCNENRLLKARELL----GQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP 294
I+ ++ +K K K + L + C GR E + H+ + G P
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS-IFHKMVAIGCSP 485
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 112/275 (40%), Gaps = 8/275 (2%)
Query: 213 FWRISQ-KGN-GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQ 270
FW S+ K N Y L +LC+ G + A ++ + G+ R L S
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148
Query: 271 CSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE-MQDRGFKP 329
G+ T L+ ++G ++S V L ++++A K+ E ++ +
Sbjct: 149 AEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKL---DRVEDAMKLFDEHLRFQSCND 205
Query: 330 TRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLES 389
T+ F + LC V + ++A++++ M C P+ YN L++ E
Sbjct: 206 TKT-FNILIRGLCGVGKAEKALELLGV-MSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 390 LNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLC 449
+ C+ D TY ++ C+ + EAS LL+ M +P ++N L+ G
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 450 SLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
G A MIS G P++ + SL +C
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 193/441 (43%), Gaps = 26/441 (5%)
Query: 55 LGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNW 114
L ++G+ + VI +M + ++ +N NA ++ A LF+ + + V
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 115 TQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEV--KSRVHALNLLMYALCGKGRSDLALQ 172
++ ++ +E A F + EV V L++A + A +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMR---EVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 173 IFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM------------FWRISQKG 220
+F+ M +GC PN +Y+ L+ G C G++ +A + M F +
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
++V Y LLD C+ + EEA ++L + +G + + Y+ L C G+ ++
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK-LDEA 693
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+ + E G +L +Y+++ + + D A KV+ +M + P I+ +
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG 753
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
LCKV + DEA K+++ M C PN Y ++ +G LE L +M K G
Sbjct: 754 LCKVGKTDEAYKLMQM-MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK-GVA 811
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADS-YNSLIKGLCSLGRQYEAVM 459
+ TY +L++ C+ A LLE+M +++WP + Y +I+G +++ +
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTHWPTHTAGYRKVIEG---FNKEFIESL 867
Query: 460 WLEDMISQGKL-PEISVWKSL 479
L D I Q P +SV++ L
Sbjct: 868 GLLDEIGQDDTAPFLSVYRLL 888
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/480 (21%), Positives = 205/480 (42%), Gaps = 30/480 (6%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N Y+T++ +LG + V+ M + C +F S ++ Y +G A L
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSE------DRLEAAHGLFVDNSCGWEVKSRVHALNLL 157
K + + + +N L+ + + D L+ A + + V ++++ ++
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN-VSSF 454
Query: 158 MYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRIS 217
LC G+ + A + +EM QG P+ +Y+ ++ LC+ ++ L + +F +
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM----ELAFLLFEEMK 510
Query: 218 QKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDI 277
+ G D+ Y ++D+ C+ G E+A + +++ G Y L + + +
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL-IHAYLKAKKV 569
Query: 278 EGTKRLIHEALIKGSVPSLSSYNAM------------AVDLY----SESKIDEADKVIVE 321
L L +G +P++ +Y+A+ A ++ + + D +
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
D +P + A + CK RV+EA K+++ M C PN VY+ L+ L VG
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA-MSMEGCEPNQIVYDALIDGLCKVG 688
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
E +MS+ G A TY L++ + +R AS++L +M S P Y
Sbjct: 689 KLDEAQEVKTEMSEH-GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747
Query: 442 NSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
+I GLC +G+ EA ++ M +G P + + ++ F + ++ E+ R+ S
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 109/501 (21%), Positives = 202/501 (40%), Gaps = 26/501 (5%)
Query: 9 LTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVI 68
L+ + + +++R P + F A R Y H PVY ++ ++ + +
Sbjct: 130 LSESLVIEVLRLIARPSAVISFFVWA-GRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFL 188
Query: 69 EQMRQDSCECKDTVFASAINI----YANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQI 124
+Q+R D E VF +N+ + G A+ + F ++N L+Q
Sbjct: 189 QQIRDDDKE----VFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQA 244
Query: 125 MVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYP 184
+ DRL++A + + S ++ L Y+LC G+ AL + + ++ P
Sbjct: 245 FLKADRLDSASLIHREMSLA-NLRMDGFTLRCFAYSLCKVGKWREALTLVETENF---VP 300
Query: 185 NRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEA 244
+ Y L+ GLC EA L R+ ++V Y TLL +
Sbjct: 301 DTVFYTKLISGLCEASLFEEAMDFLN----RMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAV 304
+L+ ++ +G + +N L + C+ G D +L+ + + G +P YN +
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSG-DHSYAYKLLKKMVKCGHMPGYVVYNILIG 415
Query: 305 DLYSESK------IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDM 358
+ + +D A+K EM G + + LC + ++A VI E M
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE-M 474
Query: 359 VAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERR 418
+ +P++ Y+ +L L N +M K+ G AD TY I+++ C+
Sbjct: 475 IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-KRGGLVADVYTYTIMVDSFCKAGL 533
Query: 419 YLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKS 478
+A + +M P +Y +LI + A E M+S+G LP I + +
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 479 LASLFCNLEMMKASSEIFNRL 499
L C ++ + +IF R+
Sbjct: 594 LIDGHCKAGQVEKACQIFERM 614
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/502 (20%), Positives = 211/502 (42%), Gaps = 58/502 (11%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+ + Y+ +++ L + ++ + E+M++ + ++ + AGL+++A
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
F + + C ++ L+ + ++ A+ LF + + + L+
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF-ETMLSEGCLPNIVTYSALIDG 597
Query: 161 LCGKGRSDLALQIFQEM----------------DYQGCYPNRDSYAILMKGLCHDGRLHE 204
C G+ + A QIF+ M D PN +Y L+ G C R+ E
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 205 ATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN 264
A LL +M S +G + +VY L+D LC+ GK +EA E+ +++ G A Y+
Sbjct: 658 ARKLLDAM----SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 265 RLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQD 324
L + + + + +++ + L P++ Y M L K DEA K++ M++
Sbjct: 714 SL-IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 325 RGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL------- 377
+G +P + A + + +++ ++++E M + PN Y +L+ +
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLER-MGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 378 ---------------RNVGNSAAVLESLNK-------MSKKVG---CTADRETYIILLEM 412
+ V+E NK + ++G Y +L++
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDN 891
Query: 413 LCRERRYLEASQLLEQMSIKS--YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL 470
L + +R A +LLE+++ S + +YNSLI+ LC + A +M +G +
Sbjct: 892 LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Query: 471 PEISVWKSL-ASLFCNLEMMKA 491
PE+ + SL LF N ++ +A
Sbjct: 952 PEMQSFCSLIKGLFRNSKISEA 973
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 189/459 (41%), Gaps = 35/459 (7%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y +IS L + E D + +MR SC +++ + N + + +
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN-SCGWEVKSRVHALNLLMYALCGKGR 166
C + FN+L+ + A+ L CG V+ N+L+ ++CG
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVY--NILIGSICGDKD 422
Query: 167 S------DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
S DLA + + EM G N+ + + + LC G+ +A +S+ + +G
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA----FSVIREMIGQG 478
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
D Y +L+ LC K E A + ++ R GL A Y + S C G IE
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL-IEQA 537
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
++ +E G P++ +Y A+ K+ A+++ M G P + A +
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
CK +V++A ++ E M +P+ ++Y K + V+
Sbjct: 598 HCKAGQVEKACQIFER-MCGSKDVPDVDMY---FKQYDDNSERPNVV------------- 640
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
TY LL+ C+ R EA +LL+ MS++ P Y++LI GLC +G+ EA
Sbjct: 641 ----TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 461 LEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+M G + + SL + ++ +S++ +++
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 181/470 (38%), Gaps = 56/470 (11%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y M+ +G + + R +MR+ C + + I+ Y A V A LF+ +
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWE----------------VKSR 150
C+ +++ L+ ++E A +F + CG + +
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIF-ERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
V L+ C R + A ++ M +GC PN+ Y L+ GLC G+L EA +
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 211 SMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQ 270
M S+ G + Y +L+D + + + A ++LSK+L Y +
Sbjct: 699 EM----SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 271 CSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
C G+ E K L+ KG P++ +Y AM KI+ +++ M +G P
Sbjct: 755 CKVGKTDEAYK-LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Query: 331 RAIFEAKVAALCKVSRVDEAIKVIEE--------------------------------DM 358
+ + CK +D A ++EE ++
Sbjct: 814 YVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Query: 359 VAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTAD-RETYIILLEMLCRER 417
+ P VY +L+ NL L L +++ D TY L+E LC
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933
Query: 418 RYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQ 467
+ A QL +M+ K P S+ SLIKGL + EA++ L D IS
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL-DFISH 982
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 186/443 (41%), Gaps = 45/443 (10%)
Query: 57 TSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKN-IPQFNCVNWT 115
+S + R+V + M + F +N Y G +++A+ + + + +F
Sbjct: 181 SSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDN 240
Query: 116 QSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQ 175
++NT+L+ M + RL L +D V +RV N L+Y C G A QI +
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRV-TYNNLVYGYCKLGSLKEAFQIVE 299
Query: 176 EMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDAL 235
M P+ +Y IL+ GLC+ G + E L+ +M Q D+V Y TL+D
Sbjct: 300 LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP----DVVTYNTLIDGC 355
Query: 236 CEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL-IKGSVP 294
E G EA +++ ++ G+KA + +N + L E R + E + + G P
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHN-ISLKWLCKEEKREAVTRKVKELVDMHGFSP 414
Query: 295 SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVI 354
+ +Y+ + + A +++ EM +G K + ALCK ++DEA
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA---- 470
Query: 355 EEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLC 414
N+ NSA K G D TY L+
Sbjct: 471 -----------------------HNLLNSA----------HKRGFIVDEVTYGTLIMGFF 497
Query: 415 RERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEIS 474
RE + +A ++ ++M P ++NSLI GLC G+ A+ +++ G LP+ S
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS 557
Query: 475 VWKSLASLFCNLEMMKASSEIFN 497
+ S+ +C ++ + E +N
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYN 580
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 188/446 (42%), Gaps = 43/446 (9%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y T++ + GRL ++++++ M+++ + + + Y G + EA + + +
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
Q N + ++N L+ + + + L +D +++ V N L+ G
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLEL-MDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
S A ++ ++M+ G N+ ++ I +K LC + + T + + + G DIV
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL---VDMHGFSPDIV 417
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y TL+ A + G A+E++ ++ +KG+K N + + C + R ++ L++
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE-RKLDEAHNLLNS 476
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKI-------DEADKVIV------------------- 320
A +G + +Y + + + E K+ DE KV +
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK 536
Query: 321 ---------EMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
E+ + G P + F + + CK RV++A + E + + P++ N
Sbjct: 537 TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNES-IKHSFKPDNYTCN 595
Query: 372 ILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSI 431
ILL L G + L N + ++ D TY ++ C++++ EA LL +M
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEER--EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 432 KSYWPCADSYNSLIKGLCSLGRQYEA 457
K P +YNS I L G+ E
Sbjct: 654 KGLEPDRFTYNSFISLLMEDGKLSET 679
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 16/277 (5%)
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN 141
+ + I Y G + A+ + + + Q T + NT+L + E +L+ AH L N
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL--N 475
Query: 142 SC---GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
S G+ V + L+ + + + AL+++ EM P ++ L+ GLCH
Sbjct: 476 SAHKRGFIVDEVTYGT--LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 199 DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA 258
G+ T L F +++ G D + +++ C++G+ E+A E ++ ++ K
Sbjct: 534 HGK----TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 259 PKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKV 318
N L C +G + LI+ +YN M + K+ EA +
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALN--FFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDL 647
Query: 319 IVEMQDRGFKPTRAIFEAKVAALC---KVSRVDEAIK 352
+ EM+++G +P R + + ++ L K+S DE +K
Sbjct: 648 LSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 121/273 (44%), Gaps = 7/273 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y T+I G L +++ +M Q + + ++ +DEA L +
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ + ++ TL+ E+++E A ++ D ++ V N L+ LC G+
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMW-DEMKKVKITPTVSTFNSLIGGLCHHGK 536
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
++LA++ F E+ G P+ ++ ++ G C +GR+ +A + + + D
Sbjct: 537 TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA----FEFYNESIKHSFKPDNY 592
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
LL+ LC++G E+A+ + ++ + + YN + + C D + ++ L+ E
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKD-KKLKEAYDLLSE 650
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVI 319
KG P +YN+ L + K+ E D+++
Sbjct: 651 MEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 8/226 (3%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
+A ++ N A R + + Y T+I ++ + ++ ++M++ + F S
Sbjct: 469 EAHNLLNSAHKR--GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 86 AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGW 145
I + G + A+ F + + + +FN+++ E R+E A F + S
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE-FYNESIKH 585
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
K + N+L+ LC +G ++ AL F + + + +Y ++ C D +L EA
Sbjct: 586 SFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEA 644
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKI 251
Y + + +KG D Y + + L EDGK E E+L K
Sbjct: 645 ----YDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%)
Query: 356 EDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCR 415
+DMV + N + +N+L+ G L L +M + D TY +L+ + +
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 416 ERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISV 475
+ R + +LL M P +YN+L+ G C LG EA +E M LP++
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 476 WKSLASLFCNLEMMKASSEIFNRLRSL 502
+ L + CN M+ E+ + ++SL
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSL 339
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/525 (21%), Positives = 206/525 (39%), Gaps = 41/525 (7%)
Query: 9 LTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVI 68
L ++ +++ Q NP+ +L + + P Y + + + + + L G L +++
Sbjct: 74 LNTRFVISVLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELL 133
Query: 69 EQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSE 128
+++R D + I + GL +F I T+ +N ++ +V
Sbjct: 134 KEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKS 193
Query: 129 DRLEAAHGLFV---DNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN 185
+ L+ A+ F + C K N+L++ +C KG D A+++ ++M+ +G PN
Sbjct: 194 NSLDLAYLKFQQMRSDGC----KPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPN 249
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSMFWR------------------------------ 215
+Y IL+ G GR+ EA L M R
Sbjct: 250 VFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLV 309
Query: 216 -ISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
+K + V Y +L L + +E + L KI +G +N +S G
Sbjct: 310 GFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAA-MSCLLKG 368
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
D+ T R+ + +G P + Y + L + + E D+ + +M G + +
Sbjct: 369 HDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSY 428
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
A + LCK R++ A + E M PN +N L G+ V L K+
Sbjct: 429 NAVIDCLCKARRIENAAMFLTE-MQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLL 487
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
G D T+ +++ LCR + +A ++M P +YN LI+ CS G
Sbjct: 488 VH-GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT 546
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+V M G P++ + + FC + +K + E+ +
Sbjct: 547 DRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTM 591
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 181/462 (39%), Gaps = 45/462 (9%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+Y +I L S L +QMR D C+ + I+ G+VDEAI L K +
Sbjct: 182 LYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQM 241
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAA-----------------------HGLF----- 138
Q ++ L+ + R++ A HG+F
Sbjct: 242 EQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPP 301
Query: 139 ---VDNSCGWEVK----SRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAI 191
+ G+ K RV + ++Y L + Q +++ +G P+ ++
Sbjct: 302 CKAFEVLVGFMEKDSNLQRV-GYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNA 360
Query: 192 LMKGLCHDGRLHEATHLLYSMFWRISQKG-NGEDIVVYRTLLDALCEDGKFEEAIEILSK 250
M L L E + R + G NG Y L+ AL +F E L +
Sbjct: 361 AMSCLLKGHDLVETCRIFDGFVSRGVKPGFNG-----YLVLVQALLNAQRFSEGDRYLKQ 415
Query: 251 ILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSES 310
+ GL + YN + C R IE + E +G P+L ++N
Sbjct: 416 MGVDGLLSSVYSYNAVIDCLCK-ARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRG 474
Query: 311 KIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVY 370
+ + V+ ++ GFKP F + LC+ + +A +E M+ PN Y
Sbjct: 475 DVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKE-MLEWGIEPNEITY 533
Query: 371 NILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMS 430
NIL+++ + G++ ++ KM K+ G + D Y ++ C+ R+ +A +LL+ M
Sbjct: 534 NILIRSCCSTGDTDRSVKLFAKM-KENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 431 IKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
P +Y++LIK L GR+ EA + G +P+
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 113/288 (39%), Gaps = 18/288 (6%)
Query: 29 HIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAIN 88
IF+ SR K NG Y ++ L + R E ++QM D + + I+
Sbjct: 376 RIFDGFVSRGVKPGFNG--YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVID 433
Query: 89 IYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVK 148
A ++ A + +FNT L ++ HG+ ++ K
Sbjct: 434 CLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGV-LEKLLVHGFK 492
Query: 149 SRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHL 208
V +L++ LC A F+EM G PN +Y IL++ C G + L
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 209 LYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDL 268
F ++ + G D+ Y + + C+ K ++A E+L +LR GLK Y+ L
Sbjct: 553 ----FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIK 608
Query: 269 SQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEAD 316
+ GR+ E + + G VP D Y++ ++E D
Sbjct: 609 ALSESGRESEA-REMFSSIERHGCVP----------DSYTKRLVEELD 645
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 143/320 (44%), Gaps = 11/320 (3%)
Query: 181 GCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGK 240
GC P+ ++ LM GLC +GR+ +A L+ M Q Y T+++ LC+ G
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP--------YGTIINGLCKMGD 56
Query: 241 FEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYN 300
E A+ +LSK+ +KA YN + C DG I + L E KG P + +Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHA-QNLFTEMHDKGIFPDVITYS 115
Query: 301 AMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVA 360
M + +A++++ +M +R P F A + AL K +V EA + I DM+
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA-EEIYGDMLR 174
Query: 361 VNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYL 420
P + YN ++ L+ M+ K C+ D T+ L+ C+ +R
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK-SCSPDVVTFSTLINGYCKAKRVD 233
Query: 421 EASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLA 480
++ +M + +Y +LI G C +G A L MIS G P ++S+
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Query: 481 SLFCNLEMMKASSEIFNRLR 500
+ C+ + ++ + I L+
Sbjct: 294 ASLCSKKELRKAFAILEDLQ 313
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 137/325 (42%), Gaps = 14/325 (4%)
Query: 71 MRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDR 130
M + C F + +N G V +A+ L + + Q + T++ +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVE----EGHQPYGTIINGLCKMGD 56
Query: 131 LEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYA 190
E+A L +K+ V N ++ LC G A +F EM +G +P+ +Y+
Sbjct: 57 TESALNLLSKME-ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 191 ILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSK 250
++ C GR +A LL M R D+V + L++AL ++GK EA EI
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINP----DVVTFSALINALVKEGKVSEAEEIYGD 171
Query: 251 ILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSES 310
+LR+G+ YN + C R + KR++ K P + +++ +
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDR-LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK 230
Query: 311 KIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVY 370
++D ++ EM RG + + C+V +D A ++ M++ PN +
Sbjct: 231 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV-MISSGVAPNYITF 289
Query: 371 NILLKNL---RNVGNSAAVLESLNK 392
+L +L + + + A+LE L K
Sbjct: 290 QSMLASLCSKKELRKAFAILEDLQK 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 93/211 (44%), Gaps = 6/211 (2%)
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
G P + ++ + L E ++ +A ++ M + G +P I + LCK+ + A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTI----INGLCKMGDTESA 60
Query: 351 IKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILL 410
+ ++ + M + + +YN ++ L G+ +M K G D TY ++
Sbjct: 61 LNLLSK-MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK-GIFPDVITYSGMI 118
Query: 411 EMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL 470
+ CR R+ +A QLL M + P ++++LI L G+ EA DM+ +G
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 471 PEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
P + S+ FC + + + + + + S
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMAS 209
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 180/413 (43%), Gaps = 21/413 (5%)
Query: 96 VDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALN 155
+++AI LF ++ + FN LL +V + + L +++ ++ N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV-LGIRNDLYTFN 124
Query: 156 LLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWR 215
+++ C + LAL I +M G P+R + L+ G C R+ +A L+ M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-- 182
Query: 216 ISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR 275
+ G DIV Y ++D+LC+ + +A + +I RKG++ Y L C+ R
Sbjct: 183 --EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 276 DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFE 335
RL+ + + K P++ +Y+A+ K+ EA ++ EM P +
Sbjct: 241 -WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 336 AKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSK 395
+ + LC R+DEA ++ + MV+ CL + YN L+ ++ +MS+
Sbjct: 300 SLINGLCLHDRIDEANQMFDL-MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 396 KVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQY 455
+ G ++ TY L++ + +A + QM P +YN L+ GLC G
Sbjct: 359 R-GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 456 EAVMWLEDMISQGKLPEISVWKSLA-------------SLFCNLEMMKASSEI 495
+A++ EDM + +I + ++ SLFC+L + +I
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 10/353 (2%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQE 176
+ +L+ +R+ A L VD K + A N ++ +LC R + A F+E
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSL-VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 177 MDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
++ +G PN +Y L+ GLC+ R +A LL M +K +++ Y LLDA
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI----KKKITPNVITYSALLDAFV 271
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSL 296
++GK EA E+ +++R + Y+ L C R I+ ++ + KG + +
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR-IDEANQMFDLMVSKGCLADV 330
Query: 297 SSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
SYN + ++++ K+ EM RG + + + VD+A + +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 357 -DMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCR 415
D ++ P+ YNILL L + G L M K+ D TY ++ +C+
Sbjct: 391 MDFFGIS--PDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLDIVTYTTVIRGMCK 447
Query: 416 ERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
+ EA L +S+K P +Y +++ GLC+ G +E M +G
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 16/292 (5%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K T N Y+ ++ +G++ E +++ E+M + S + ++S IN +DEA
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+F + C+ S+NTL+ R+E LF + S V + V N L+
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV-TYNTLIQ 373
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
G D A + F +MD+ G P+ +Y IL+ GLC +G L +A +F + ++
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA----LVIFEDMQKR 429
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
DIV Y T++ +C+ GK EEA + + KGLK Y + C
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC-------- 481
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVD-LYSESKIDEADKVIVEMQDRGFKPT 330
TK L+HE ++ + M D S+ I + ++I +M G+ P+
Sbjct: 482 TKGLLHE--VEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS 531
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 139/330 (42%), Gaps = 7/330 (2%)
Query: 170 ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYR 229
A+ +F +M +P+ + L+ + + ++ S+ ++ G D+ +
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVK----LKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 230 TLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALI 289
+++ C + A+ IL K+L+ G + + L C R + L+ + +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR-VSDAVSLVDKMVE 183
Query: 290 KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDE 349
G P + +YNA+ L ++++A E++ +G +P + A V LC SR +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 350 AIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIIL 409
A +++ DM+ PN Y+ LL G E +M + + D TY L
Sbjct: 244 AARLLS-DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR-MSIDPDIVTYSSL 301
Query: 410 LEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGK 469
+ LC R EA+Q+ + M K SYN+LI G C R + + +M +G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 470 LPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+ + +L F + + E F+++
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 7/308 (2%)
Query: 192 LMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKI 251
L K D +L++A L M + IV + LL A+ + K++ I + K+
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMV----KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM 111
Query: 252 LRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK 311
G++ +N + C + + ++ + L G P + ++ ++
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQ-VSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 312 IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
+ +A ++ +M + G+KP + A + +LCK RV++A +E + PN Y
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYT 229
Query: 372 ILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSI 431
L+ L N + L+ M KK T + TY LL+ + + LEA +L E+M
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 432 KSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKA 491
S P +Y+SLI GLC R EA + M+S+G L ++ + +L + FC + ++
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 492 SSEIFNRL 499
++F +
Sbjct: 349 GMKLFREM 356
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 121/264 (45%), Gaps = 3/264 (1%)
Query: 238 DGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLS 297
D K +AI++ S +++ +NRL LS + + L + + G L
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRL-LSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 298 SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEED 357
++N + ++ A ++ +M G++P R + V C+ +RV +A+ ++++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK- 180
Query: 358 MVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRER 417
MV + P+ YN ++ +L + ++ +K G + TY L+ LC
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSS 239
Query: 418 RYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWK 477
R+ +A++LL M K P +Y++L+ G+ EA E+M+ P+I +
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 478 SLASLFCNLEMMKASSEIFNRLRS 501
SL + C + + ++++F+ + S
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVS 323
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 168/368 (45%), Gaps = 8/368 (2%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQE 176
+ N+LL +R+ A L VD K L++ L ++ A+ +
Sbjct: 150 TLNSLLNGFCHGNRISDAVAL-VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDR 208
Query: 177 MDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
M +GC P+ +Y ++ GLC G A +LL M ++V+Y T++D+LC
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM----EAAKIEANVVIYSTVIDSLC 264
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSL 296
+ ++A+ + +++ KG++ Y+ L C+ GR + + RL+ + + + P+L
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS-RLLSDMIERKINPNL 323
Query: 297 SSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+++A+ + K+ +A+K+ EM R P + + + C + R+ EA +++E
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 357 DMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRE 416
M+ +CLPN YN L+ +E +MS++ G + TY L+ +
Sbjct: 384 -MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR-GLVGNTVTYTTLIHGFFQA 441
Query: 417 RRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVW 476
R A + +QM P +YN L+ GLC G+ +A++ E + P+I +
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 477 KSLASLFC 484
+ C
Sbjct: 502 NIMIEGMC 509
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 170/386 (44%), Gaps = 16/386 (4%)
Query: 118 FNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSR----VHALNLLMYALCGKGRSDLALQI 173
+ +L+ +S+ L+ A GLF G +SR + + L+ A+ + DL +
Sbjct: 46 YREVLRTGLSDIELDDAIGLF-----GVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISF 100
Query: 174 FQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLD 233
++M+ G N +Y IL+ C L ++ ++ + G DIV +LL+
Sbjct: 101 GEKMEILGISHNLYTYNILINCFCR----CSRLSLALALLGKMMKLGYEPDIVTLNSLLN 156
Query: 234 ALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV 293
C + +A+ ++ +++ G K + L + E LI + +G
Sbjct: 157 GFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA-LIDRMVQRGCQ 215
Query: 294 PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV 353
P L +Y A+ L D A ++ +M+ + I+ + +LCK D+A+ +
Sbjct: 216 PDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 275
Query: 354 IEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEML 413
E M PN Y+ L+ L N G + L+ M ++ + T+ L++
Sbjct: 276 FTE-MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-KINPNLVTFSALIDAF 333
Query: 414 CRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEI 473
++ + ++A +L E+M +S P +Y+SLI G C L R EA LE MI + LP +
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 474 SVWKSLASLFCNLEMMKASSEIFNRL 499
+ +L + FC + + E+F +
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREM 419
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 170/396 (42%), Gaps = 55/396 (13%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
Y + + T+I L + E +I++M Q C+ + + +N G D A+
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
L +++EAA ++++ V + ++ +
Sbjct: 239 NLL-------------------------NKMEAA-----------KIEANVVIYSTVIDS 262
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
LC D AL +F EM+ +G PN +Y+ L+ LC+ GR +A+ LL M I +K
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM---IERKI 319
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
N ++V + L+DA + GK +A ++ +++++ + Y+ L C R E
Sbjct: 320 N-PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA- 377
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
K+++ + K +P++ +YN + ++D+ ++ EM RG + +
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSA---AVLESLNKMSKKV 397
+ D A V ++ MV+V PN YNILL L G A V E L + + +
Sbjct: 438 FFQARDCDNAQMVFKQ-MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME- 495
Query: 398 GCTADRETYIILLEMLCRERR------YLEASQLLE 427
D TY I++E +C+ + Y AS L E
Sbjct: 496 ---PDIYTYNIMIEGMCKAGKWKMGGIYFVASALKE 528
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 170/407 (41%), Gaps = 8/407 (1%)
Query: 96 VDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALN 155
+D+AI LF + Q F+ LL + ++ + F + + ++ N
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVIS-FGEKMEILGISHNLYTYN 117
Query: 156 LLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWR 215
+L+ C R LAL + +M G P+ + L+ G CH R+ +A L+ M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV-- 175
Query: 216 ISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR 275
+ G D V + TL+ L K EA+ ++ +++++G + Y + C G
Sbjct: 176 --EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG- 232
Query: 276 DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFE 335
D + L+++ ++ Y+ + L D+A + EM+++G +P +
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 336 AKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSK 395
+ ++ LC R +A +++ DM+ PN ++ L+ G + +M K
Sbjct: 293 SLISCLCNYGRWSDASRLLS-DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 396 KVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQY 455
+ + TY L+ C R EA Q+LE M K P +YN+LI G C R
Sbjct: 352 R-SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 456 EAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRSL 502
+ + +M +G + + +L F + +F ++ S+
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 457
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K N ++ +I G+L + + E+M + S + ++S IN + + EA
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+ + + + +C+ ++NTL+ R++ LF + S V + V L++
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV-TYTTLIH 436
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
D A +F++M G +PN +Y IL+ GLC +G+L +A +F + +
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM----VVFEYLQRS 492
Query: 220 GNGEDIVVYRTLLDALCEDGKFE 242
DI Y +++ +C+ GK++
Sbjct: 493 TMEPDIYTYNIMIEGMCKAGKWK 515
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 193/443 (43%), Gaps = 11/443 (2%)
Query: 66 DVIEQMRQDSCECKDTVFASAINIYAN-------AGLVDEAITLFKNIPQFNCVNWTQSF 118
D + +R+ C+ K + ++I+++ G +D A+ L K + + +
Sbjct: 100 DRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITH 159
Query: 119 NTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMD 178
N LL + +E A GL + + V + N L+ LC D AL +F M+
Sbjct: 160 NHLLNGLCKAGYIEKADGLVREMREMGPSPNCV-SYNTLIKGLCSVNNVDKALYLFNTMN 218
Query: 179 YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCED 238
G PNR + I++ LC G + L SQ DIV+ L+D+ ++
Sbjct: 219 KYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKN 278
Query: 239 GKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSS 298
G +A+E+ ++ +K + A YN + CS G ++ + + + +G P + +
Sbjct: 279 GNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG-NMVAAYGFMCDMVKRGVNPDVFT 337
Query: 299 YNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDM 358
YN + L E K DEA + MQ+ G P + ++ + LC V+ A + + +
Sbjct: 338 YNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSML 397
Query: 359 VAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERR 418
+ LP ++N+++ G++++ L LN M G + T L+ + R
Sbjct: 398 KSSL-LPEVLLWNVVIDGYGRYGDTSSALSVLNLM-LSYGVKPNVYTNNALIHGYVKGGR 455
Query: 419 YLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKS 478
++A + +M P +YN L+ C+LG A ++M+ +G P+I +
Sbjct: 456 LIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTE 515
Query: 479 LASLFCNLEMMKASSEIFNRLRS 501
L C +K + + +R+++
Sbjct: 516 LVRGLCWKGRLKKAESLLSRIQA 538
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 151/311 (48%), Gaps = 13/311 (4%)
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH---DGRL 202
+++ V N+++ ALC G+ + A + ++M GC PN SY L+ G C +G++
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 203 HEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC 262
++A +L M + ++ + L+D +D ++++ ++L + +K
Sbjct: 278 YKADAVLKEMV----ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 263 YNRLDLSQCSDGRDIEGTKRLIHEALIKGSV-PSLSSYNAMAVDLYSESKIDEADKVIVE 321
YN L C+ G+ E + + ++ V P+L +YNA+ + EA +
Sbjct: 334 YNSLINGLCNGGKISEAIS--MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
++ +G PT ++ + A CK+ ++D+ ++E+M +P+ YN L+ L G
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGF-ALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
N A + ++++ K D T+ IL+E CR+ +A+ LL++MS P +Y
Sbjct: 451 NIEAAKKLFDQLTSK--GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Query: 442 NSLIKGLCSLG 452
N ++KG C G
Sbjct: 509 NIVMKGYCKEG 519
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 182/427 (42%), Gaps = 56/427 (13%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+ +I+ L +G++ + RDV+E M+ V+ + N+ + L+D L N
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMK---------VYGCSPNVVSYNTLIDGYCKLGGNG 275
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ + +L+ MV D V + N+L+
Sbjct: 276 KMYKA-------DAVLKEMVEND-----------------VSPNLTTFNILIDGFWKDDN 311
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
++++F+EM Q PN SY L+ GLC+ G++ EA SM ++ G +++
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI----SMRDKMVSAGVQPNLI 367
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y L++ C++ +EA+++ + +G R YN L + C G+ I+ L E
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK-IDDGFALKEE 426
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
+G VP + +YN + L I+ A K+ ++ +G P F + C+
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETY 406
+A +++E M + P YNI++K GN A +M K+ + +Y
Sbjct: 486 SRKAAMLLKE-MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 407 IILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMIS 466
+LL+ ++ + +A+ LL +M L KGL YE V E+M+
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEM--------------LEKGLVPNRITYEIVK--EEMVD 588
Query: 467 QGKLPEI 473
QG +P+I
Sbjct: 589 QGFVPDI 595
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 161/345 (46%), Gaps = 17/345 (4%)
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
LM AL + RS +++EM + PN ++ +++ LC G++++A ++ M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM---- 249
Query: 217 SQKGNGEDIVVYRTLLDALCE---DGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSD 273
G ++V Y TL+D C+ +GK +A +L +++ + +N L D
Sbjct: 250 KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKD 309
Query: 274 GRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAI 333
++ G+ ++ E L + P++ SYN++ L + KI EA + +M G +P
Sbjct: 310 D-NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 334 FEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLK---NLRNVGNSAAVLESL 390
+ A + CK + EA+ + + +P + +YN+L+ L + + A+ E +
Sbjct: 369 YNALINGFCKNDMLKEALDMFGS-VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 391 NKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCS 450
++ G D TY L+ LCR A +L +Q++ K P +++ L++G C
Sbjct: 428 ----EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCR 482
Query: 451 LGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEI 495
G +A M L++M G P + + +C +KA++ +
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 148/379 (39%), Gaps = 56/379 (14%)
Query: 138 FVDNSCGWEVKSRVHAL-------------NLLMYALCGKGRSDLALQIFQEMDYQGCYP 184
FV N +V S HA+ ++L+ A R +L + F+ Y G
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKL 186
Query: 185 NRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEA 244
+ S LM L + R + ++ M R Q ++ + +++ALC+ GK +A
Sbjct: 187 SALSCKPLMIALLKENRSADVEYVYKEMIRRKIQ----PNVFTFNVVINALCKTGKMNKA 242
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR--LIHEALIKGSVPSLSSYNAM 302
+++ + G YN L C G + + K ++ E + P+L+++N +
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 303 AVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVN 362
+ + + + KV EM D+ KP + + + LC ++ EAI + + MV+
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS-MRDKMVSAG 361
Query: 363 CLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEA 422
PN YN L+ C+ EA
Sbjct: 362 VQPNLITYNALINGF------------------------------------CKNDMLKEA 385
Query: 423 SQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASL 482
+ + + P YN LI C LG+ + E+M +G +P++ + L +
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 483 FCNLEMMKASSEIFNRLRS 501
C ++A+ ++F++L S
Sbjct: 446 LCRNGNIEAAKKLFDQLTS 464
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 7/235 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y +I+ + L E D+ ++ ++ I+ Y G +D+ L + +
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ V ++N L+ + +EAA LF D + V ++LM C KG
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTSKGLPDLV-TFHILMEGYCRKGE 485
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
S A + +EM G P +Y I+MKG C +G L AT++ M + N +
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMN---VA 542
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG--RDIEG 279
Y LL + GK E+A +L+++L KGL + Y + G DIEG
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEG 597
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 190/468 (40%), Gaps = 81/468 (17%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
PRV + + Q+++ KN H F R P + H+ Y ++ ILG+S + +
Sbjct: 64 PRV-SSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLW 122
Query: 66 DVIEQMRQ-DSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQI 124
D + + R+ + E VF Y+ A L EA F + +F
Sbjct: 123 DFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFG-------------- 168
Query: 125 MVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYP 184
+K V L+ L+++LC K + A + F + G P
Sbjct: 169 ----------------------IKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 206
Query: 185 NRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEA 244
+ +Y+IL++G R+ +A+ +F + ++ D++ Y LLDALC+ G +
Sbjct: 207 SAKTYSILVRGW---ARIRDASG-ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAV 304
++ ++ GLK + + C G D+ +++ VP++ ++N +
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAG-DVHSAYKVLDRMKRYDLVPNVYTFNHIIK 321
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
L K+D+A ++ EM +G P + + +A C V+ A K++ M CL
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR-MDRTKCL 380
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
P+ YN++LK L +G R+ A++
Sbjct: 381 PDRHTYNMVLKLLIRIG------------------------------------RFDRATE 404
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLC-SLGRQYEAVMWLEDMISQGKLP 471
+ E MS + ++P +Y +I GL G+ EA + E MI +G P
Sbjct: 405 IWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
G P + + + L + ++ A + + + G P+ + V ++ A
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 351 IKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILL 410
KV +E M+ NC+ + YN LL L G+ + +M +G D ++ I +
Sbjct: 228 RKVFDE-MLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGN-LGLKPDAYSFAIFI 285
Query: 411 EMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL 470
C A ++L++M P ++N +IK LC + +A + L++MI +G
Sbjct: 286 HAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN 345
Query: 471 PEISVWKSLASLFCNLEMMKASSEIFNRL 499
P+ + S+ + C+ + ++++ +R+
Sbjct: 346 PDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 38/266 (14%)
Query: 231 LLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIK 290
LL +LC+ A E K G+ + Y+ L + + RD G +++ E L +
Sbjct: 179 LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL-VRGWARIRDASGARKVFDEMLER 237
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
V L +YNA+ L +D K+ EM + G KP F + A C V A
Sbjct: 238 NCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSA 297
Query: 351 IKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILL 410
KV++ M + +PN +N ++K L
Sbjct: 298 YKVLDR-MKRYDLVPNVYTFNHIIKTL--------------------------------- 323
Query: 411 EMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL 470
C+ + +A LL++M K P +YNS++ C A L M L
Sbjct: 324 ---CKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL 380
Query: 471 PEISVWKSLASLFCNLEMMKASSEIF 496
P+ + + L + ++EI+
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRATEIW 406
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 7/325 (2%)
Query: 156 LLMYALCGKGRSDLALQIFQEMDYQ-GCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
L+ G+G +L++F+ M Q C PN Y I++ L +G L + + F
Sbjct: 110 LVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEV----FD 165
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
+ +G + Y L++A +G++E ++E+L ++ + + YN + + G
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG 225
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
D EG L E +G P + +YN + DEA+ V M D G P +
Sbjct: 226 LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
V K+ R+++ ++ E M + LP+ YN+LL+ G+ + ++M
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGE-MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM- 343
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
+ GCT + TY +LL + + RY + QL +M + P A +YN LI+ G
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 455 YEAVMWLEDMISQGKLPEISVWKSL 479
E V DM+ + P++ ++ +
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGI 428
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 191/460 (41%), Gaps = 11/460 (2%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N +Y MIS+LG G L + +V ++M + + IN Y G + ++ L
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSED-RLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
+ ++NT++ E GLF + ++ + N L+ A
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG-IQPDIVTYNTLLSACA 258
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
+G D A +F+ M+ G P+ +Y+ L++ RL + LL M + G+
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM----ASGGSL 314
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
DI Y LL+A + G +EA+ + ++ G Y+ L GR + ++
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR-YDDVRQ 373
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSESK-IDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
L E + P ++YN + ++++ E E + +M + +P +E + A
Sbjct: 374 LFLEMKSSNTDPDAATYNIL-IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
K ++A K+++ M A + +P+S+ Y +++ L + N M +VG
Sbjct: 433 GKGGLHEDARKILQY-MTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM-HEVGSNP 490
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
ET+ LL R E+ +L ++ D++N+ I+ G+ EAV
Sbjct: 491 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Query: 462 EDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
DM P+ +++ S++ ++ E F +++
Sbjct: 551 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKA 590
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/426 (19%), Positives = 166/426 (38%), Gaps = 12/426 (2%)
Query: 42 THNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAIT 101
T+N + A L G LG + +MR + + + + ++ A GL DEA
Sbjct: 213 TYNTVINACARGGLDWEGLLG----LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEM 268
Query: 102 LFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYAL 161
+F+ + V +++ L++ RLE L + + G + + + N+L+ A
Sbjct: 269 VFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD-ITSYNVLLEAY 327
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
G A+ +F +M GC PN ++Y++L+ GR + L F +
Sbjct: 328 AKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL----FLEMKSSNT 383
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
D Y L++ E G F+E + + ++ + ++ Y + + C G E +
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGI-IFACGKGGLHEDAR 442
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
+++ VPS +Y + + +EA M + G P+ F + + +
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSF 502
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
+ V E+ ++ +V N + +N ++ + G +++ M K C
Sbjct: 503 ARGGLVKESEAILSR-LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR-CDP 560
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
D T +L + R E + E+M P Y ++ R + L
Sbjct: 561 DERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELL 620
Query: 462 EDMISQ 467
E+M+S
Sbjct: 621 EEMLSN 626
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 195/461 (42%), Gaps = 46/461 (9%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
Y + + T+I L + E +++QM Q C+ + + +N G +D A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
L +++EAA +K+ V N ++ +
Sbjct: 244 NLL-------------------------NKMEAAR-----------IKANVVIFNTIIDS 267
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
LC ++A+ +F EM+ +G PN +Y L+ LC+ GR +A+ LL +M +K
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML----EKK 323
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
++V + L+DA ++GK EA ++ +++++ + YN L C R ++
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR-LDEA 382
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
K++ + K +P++ +YN + ++++ ++ EM RG + +
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
+ D A V ++ MV+ + Y+ILL L + G L + K +K
Sbjct: 443 FFQAGDCDSAQMVFKQ-MVSNRVPTDIMTYSILLHGLCSYGKLDTAL-VIFKYLQKSEME 500
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
+ Y ++E +C+ + EA L +SIK P +YN++I GLCS EA
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDL 557
Query: 461 LEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
M G LP + +L AS+E+ +RS
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 191/460 (41%), Gaps = 80/460 (17%)
Query: 42 THNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAIT 101
+H+ Y+ I+ +L V+ +M + E +S +N Y ++ + +A+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 102 LFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYAL 161
L + + T +F TL+ HGLF+ N
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLI------------HGLFLHN-------------------- 202
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM-FWRISQKG 220
++ A+ + +M +GC P+ +Y ++ GLC G + A +LL M RI
Sbjct: 203 ----KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA-- 256
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
++V++ T++D+LC+ E A+++ +++ KG++ YN L C+ GR + +
Sbjct: 257 ---NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
RL+ L K P++ ++NA+ + E K+ EA+K+ EM R P + +
Sbjct: 314 -RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
C +R+DEA K + + MV+ +CLPN + YN
Sbjct: 373 FCMHNRLDEA-KQMFKFMVSKDCLPNIQTYNT---------------------------- 403
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
L+ C+ +R + +L +MS + +Y ++I+G G A M
Sbjct: 404 --------LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 461 LEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+ M+S +I + L C+ + + IF L+
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 163/362 (45%), Gaps = 15/362 (4%)
Query: 144 GWEVKSR----VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHD 199
G VKSR + N L+ A+ + +L + + ++M G + +Y+I + C
Sbjct: 72 GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 200 GRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAP 259
+L A +L M + G DIV +LL+ C + +A+ ++ +++ G K
Sbjct: 132 SQLSLALAVLAKMM----KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 260 KRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVI 319
+ L + E L+ + + +G P L +Y + L ID A ++
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVA-LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 320 VEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRN 379
+M+ K IF + +LCK V+ A+ + E M PN YN L+ L N
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE-METKGIRPNVVTYNSLINCLCN 305
Query: 380 VG--NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPC 437
G + A+ L S N + KK+ + T+ L++ +E + +EA +L E+M +S P
Sbjct: 306 YGRWSDASRLLS-NMLEKKI--NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 438 ADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFN 497
+YN LI G C R EA + M+S+ LP I + +L + FC + ++ E+F
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 498 RL 499
+
Sbjct: 423 EM 424
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 16/272 (5%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y +I+ RL E + + + M C + + IN + V++ + LF+ +
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
Q V T ++ T++Q ++A +F V + + ++L++ LC G+
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF-KQMVSNRVPTDIMTYSILLHGLCSYGK 483
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
D AL IF+ + N Y +++G+C G++ EA + +F +S K D+V
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA----WDLFCSLSIK---PDVV 536
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN---RLDLSQCSDGRDIEGTKRL 283
Y T++ LC +EA ++ K+ G YN R +L C D + L
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDC----DRAASAEL 592
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKIDEA 315
I E G V S+ ++ ++ + ++D++
Sbjct: 593 IKEMRSSGFVGDASTI-SLVTNMLHDGRLDKS 623
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 17/317 (5%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
A+ +F E +++ + N Y ++I+ L GR + ++ M + F +
Sbjct: 277 AVDLFTEMETKGIR--PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSC 143
I+ + G + EA L + + Q + T ++N L+ +RL+ A +F V C
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH 203
+ N L+ C R + +++F+EM +G N +Y +++G G
Sbjct: 395 ----LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 204 EATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
A + F ++ DI+ Y LL LC GK + A+ I + + ++ Y
Sbjct: 451 SAQMV----FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
N + C G+ E L IK P + +YN M L S+ + EAD + +M+
Sbjct: 507 NTMIEGMCKAGKVGEAWD-LFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Query: 324 DRGFKPTRAIFEAKVAA 340
+ G P + + A
Sbjct: 563 EDGTLPNSGTYNTLIRA 579
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 25/296 (8%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K N + +I G+L E + E+M Q S + + IN + +DEA
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+FK + +C+ Q++NTL+ R+E LF + S V + V ++
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV-TYTTIIQ 441
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
G D A +F++M + +Y+IL+ GLC G+L A + ++ QK
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL-----VIFKYLQK 496
Query: 220 GNGE-DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
E +I +Y T+++ +C+ GK EA ++ + +K YN + CS
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCS------ 547
Query: 279 GTKRLIHEA--LIK-----GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
KRL+ EA L + G++P+ +YN + + + ++I EM+ GF
Sbjct: 548 --KRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGF 601
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Query: 311 KIDEADKVIVEM-QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEV 369
K+D+A + +M + R F P+ F ++A+ K+++ + I + E M + +
Sbjct: 63 KVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVIS-LGEQMQTLGISHDLYT 120
Query: 370 YNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQM 429
Y+I + + L L KM K+G D T LL C +R +A L++QM
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKM-MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 430 SIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMM 489
Y P ++ +LI GL + EAV ++ M+ +G P++ + ++ + C +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 490 KASSEIFNRLRS 501
+ + N++ +
Sbjct: 240 DLALNLLNKMEA 251
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 120/297 (40%), Gaps = 35/297 (11%)
Query: 214 WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL-DLSQCS 272
W + GN + + L + C + F A +ILR NRL D+ +
Sbjct: 16 WNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR----------NRLSDIIKVD 65
Query: 273 DGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRA 332
D D+ G + + PS+ +N + + +K + + +MQ G
Sbjct: 66 DAVDLFG------DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 333 IFEAKVAALCKVSRVDEAIKVI--------EEDMVAVNCLPNSEVYNILLKNLRNVGNSA 384
+ + C+ S++ A+ V+ E D+V ++ L N ++ + + ++
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS------KRISDAV 173
Query: 385 AVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSL 444
A+++ + +M K D T+ L+ L + EA L++QM + P +Y ++
Sbjct: 174 ALVDQMVEMGYK----PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 445 IKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
+ GLC G A+ L M + + ++ ++ C ++ + ++F + +
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 192/465 (41%), Gaps = 51/465 (10%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
Y + + T+I L G++ E ++++M ++ C+ + S +N +G A+
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
L + + + N VK+ V + ++ +
Sbjct: 214 DLLRKMEERN------------------------------------VKADVFTYSTIIDS 237
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
LC G D A+ +F+EM+ +G + +Y L++GLC G+ ++ LL M R
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV-- 295
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
+++ + LLD ++GK +EA E+ +++ +G+ YN L C R E
Sbjct: 296 --PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 281 KRLIHEALIKGSV-PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
L + +++ P + ++ ++ ++D+ KV + RG + V
Sbjct: 354 NML--DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN---SAAVLESLNKMSKK 396
C+ ++ A ++ +E MV+ LP+ Y ILL L + G + + E L K
Sbjct: 412 GFCQSGKIKLAEELFQE-MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 397 VGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYE 456
+G Y ++E +C+ + +A L + K P +Y +I GLC G E
Sbjct: 471 LGIVM----YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 457 AVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
A + L M G P + +L + AS+++ ++S
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 191/413 (46%), Gaps = 26/413 (6%)
Query: 97 DEAITLFKNI----PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVH 152
D+AI LF+ + P + V++++ F+ + + L+ L ++ + ++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG-----IAHNIY 124
Query: 153 ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
LN+++ C ++ A + ++ G P+ ++ L+KGL +G++ EA L+
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD-- 182
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS 272
R+ + G D+V Y ++++ +C G A+++L K+ + +KA Y+ + S C
Sbjct: 183 --RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 273 DGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRA 332
DG I+ L E KG S+ +YN++ L K ++ ++ +M R P
Sbjct: 241 DGC-IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 333 IFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILL-----KNLRNVGNSAAVL 387
F + K ++ EA ++ +E M+ PN YN L+ +N + N+ L
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKE-MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 388 ESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKG 447
NK C+ D T+ L++ C +R + ++ +S + A +Y+ L++G
Sbjct: 359 MVRNK------CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 448 LCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
C G+ A ++M+S G LP++ + L C+ ++ + EIF L+
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 149/333 (44%), Gaps = 14/333 (4%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
A+ +F E +++ K + Y +++ L +G+ + +++ M F
Sbjct: 247 AISLFKEMETKGIKSSV--VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHG---LFVDNSC 143
++++ G + EA L+K + ++NTL+ ++RL A+ L V N C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH 203
++ + L+ C R D +++F+ + +G N +Y+IL++G C G++
Sbjct: 365 SPDIVT----FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 204 EATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
A L F + G D++ Y LLD LC++GK E+A+EI + + + Y
Sbjct: 421 LAEEL----FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
+ C G+ +E L KG P++ +Y M L + + EA+ ++ +M+
Sbjct: 477 TTIIEGMCKGGK-VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+ G P + + A + + + K+IEE
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 43/322 (13%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P V+T L + + +A ++ E +R + N Y T++ RL E
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITR--GISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 66 DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIM 125
++++ M ++ C F S I Y VD+ + +F+NI + V +++ L+Q
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ-- 411
Query: 126 VSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN 185
C G+ LA ++FQEM G P+
Sbjct: 412 ----------------------------------GFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAI 245
+Y IL+ GLC +G+L +A + F + + IV+Y T+++ +C+ GK E+A
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEI----FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVD 305
+ + KG+K Y + C G + L+ + G+ P+ +YN +
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKG-SLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 306 LYSESKIDEADKVIVEMQDRGF 327
+ + + K+I EM+ GF
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGF 574
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 206/493 (41%), Gaps = 89/493 (18%)
Query: 83 FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNS 142
+ S I +G++D A+ +F + + ++ +N + ++V E R E A ++
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIY---- 67
Query: 143 CGWEVKSRVHALNLLMYA-----LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLC 197
W++K +L Y+ LC + DL + +M+ G P+ ++ + + LC
Sbjct: 68 --WDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLC 125
Query: 198 HDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
+ ++ A + M Q+G D+V Y L++ L GK +A+EI + ++R G+
Sbjct: 126 RENKVGFAVQTFFCMV----QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVS 181
Query: 258 APKR---------CYNR-LDLSQCSDGRDIEGTK----RLIHEALIKGSV---------- 293
+ C+ R +DL+ +I+ + +++ ALI G
Sbjct: 182 PDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEA 241
Query: 294 -----------PSLSSYNAM-------------------------AVDLYS-------ES 310
P L +YN + +D YS
Sbjct: 242 LKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHC 301
Query: 311 KIDEADK----VIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPN 366
++ DK ++ EM+ RGF + + + C+ S +A ++ EE M + N
Sbjct: 302 RVSHPDKCYNFMVKEMEPRGFCDVVS-YSTLIETFCRASNTRKAYRLFEE-MRQKGMVMN 359
Query: 367 SEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLL 426
Y L+K GNS+ + L++M++ +G + DR Y +L+ LC+ +A +
Sbjct: 360 VVTYTSLIKAFLREGNSSVAKKLLDQMTE-LGLSPDRIFYTTILDHLCKSGNVDKAYGVF 418
Query: 427 EQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNL 486
M P A SYNSLI GLC GR EA+ EDM + P+ +K +
Sbjct: 419 NDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRG 478
Query: 487 EMMKASSEIFNRL 499
+ + A+ ++++++
Sbjct: 479 KKLSAAYKVWDQM 491
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 136/330 (41%), Gaps = 41/330 (12%)
Query: 157 LMYALCGKGRSDLALQ-IFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWR 215
L+ LC + DLA + + +E+ + Y L+ G C GR+ +A L M
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM--- 246
Query: 216 ISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK-----------------A 258
S+ G D+V Y LL+ ++ + A ++++++R G++
Sbjct: 247 -SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 259 PKRCYNRL----------DLSQCSD-------GRDIEGTKRLIHEALIKGSVPSLSSYNA 301
P +CYN + D+ S + RL E KG V ++ +Y +
Sbjct: 306 PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 302 MAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAV 361
+ E A K++ +M + G P R + + LCK VD+A V DM+
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFN-DMIEH 424
Query: 362 NCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLE 421
P++ YN L+ L G ++ M K C D T+ ++ L R ++
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK-ECCPDELTFKFIIGGLIRGKKLSA 483
Query: 422 ASQLLEQMSIKSYWPCADSYNSLIKGLCSL 451
A ++ +QM K + D ++LIK CS+
Sbjct: 484 AYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 124/303 (40%), Gaps = 14/303 (4%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
VY +IS +GR+ + + M + CE + +N Y + ++ A + +
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSR----VHALNLLMYALC 162
+ S+N LL+ + + V E++ R V + + L+ C
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK-----EMEPRGFCDVVSYSTLIETFC 336
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
+ A ++F+EM +G N +Y L+K +G A LL M ++ G
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM----TELGLS 392
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
D + Y T+LD LC+ G ++A + + ++ + YN L C GR E K
Sbjct: 393 PDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIK- 451
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
L + K P ++ + L K+ A KV +M D+GF R + + + A C
Sbjct: 452 LFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Query: 343 KVS 345
+S
Sbjct: 512 SMS 514
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 132/341 (38%), Gaps = 8/341 (2%)
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
L G D A+Q+F EM + Y + L + R A +++W + G
Sbjct: 19 LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAE----AIYWDMKPMG 74
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN-RLDLSQCSDGRDIEG 279
Y + LC+ KF+ +LS + G +N LDL C + + +
Sbjct: 75 FSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDL-LCRENK-VGF 132
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
+ + +G P + SY + L+ K+ +A ++ M G P A V
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVV 192
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
LC +VD A +++ E++ + ++ VYN L+ G E+L K+GC
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA-EALKSYMSKIGC 251
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVM 459
D TY +LL A ++ +M A SYN L+K C + +
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 460 WLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
++ + ++ + +L FC + + +F +R
Sbjct: 312 FMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMR 352
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 131/294 (44%), Gaps = 10/294 (3%)
Query: 67 VIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
V E+++ + V+ + I+ + AG +++A L + + C ++N LL
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYY 266
Query: 127 SEDRLEAAHGLFVDN-SCGWEVKSRVHALNLLMYALCGKGRSDLALQ-IFQEMDYQGCYP 184
+ L+ A G+ + G ++ + ++ N L+ C D + +EM+ +G +
Sbjct: 267 DNNMLKRAEGVMAEMVRSGIQLDA--YSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG-FC 323
Query: 185 NRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEA 244
+ SY+ L++ C +A Y +F + QKG ++V Y +L+ A +G A
Sbjct: 324 DVVSYSTLIETFCRASNTRKA----YRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVA 379
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAV 304
++L ++ GL +P R + L +++ + ++ + P SYN++
Sbjct: 380 KKLLDQMTELGL-SPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLIS 438
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDM 358
L ++ EA K+ +M+ + P F+ + L + ++ A KV ++ M
Sbjct: 439 GLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM 492
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 4/271 (1%)
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
+ YR+ + L + G + A+++ ++ + YNR + R E + +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESR-FELAEAIYW 68
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
+ G +Y+ L K D D ++ +M+ GF P F + LC+ +
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
+V A++ MV P+ Y IL+ L G +E N M + G + D +
Sbjct: 129 KVGFAVQTFFC-MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKA 186
Query: 406 YIILLEMLCRERRYLEASQLL-EQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
L+ LC R+ A +++ E++ YN+LI G C GR +A M
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM 246
Query: 465 ISQGKLPEISVWKSLASLFCNLEMMKASSEI 495
G P++ + L + + + M+K + +
Sbjct: 247 SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 5/199 (2%)
Query: 78 CKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL 137
C +++ I + A +A LF+ + Q V ++ +L++ + E A L
Sbjct: 323 CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKL 382
Query: 138 FVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLC 197
+ R+ +L + LC G D A +F +M P+ SY L+ GLC
Sbjct: 383 LDQMTELGLSPDRIFYTTILDH-LCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 198 HDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
GR+ EA L F + K D + ++ ++ L K A ++ +++ KG
Sbjct: 442 RSGRVTEAIKL----FEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFT 497
Query: 258 APKRCYNRLDLSQCSDGRD 276
+ + L + CS D
Sbjct: 498 LDRDVSDTLIKASCSMSAD 516
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 173/385 (44%), Gaps = 19/385 (4%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQE 176
+ +LL +R + A L VD+ G+ V N ++ LC + AL++F
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSL-VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYC 209
Query: 177 MDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
M+ +G + +Y L+ GL + GR +A LL M R +++ + L+D
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID----PNVIFFTALIDTFV 265
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALI-KGSVPS 295
++G EA + +++R+ + YN L C G G + + + ++ KG P
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG--CLGDAKYMFDLMVSKGCFPD 323
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
+ +YN + ++++ K+ EM +G + + C+ +++ A KV
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 356 EDMVAVNCLPNSEVYNILLKNLRNVGN---SAAVLESLNKMSKKVGCTADRETYIILLEM 412
MV P+ YNILL L N G + ++E L K V D TY I+++
Sbjct: 384 R-MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV----DIITYNIIIQG 438
Query: 413 LCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
LCR + EA L ++ K P A +Y ++I GLC G Q EA M G +P
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Query: 473 ISVW-KSLASLFCNL--EMMKASSE 494
++ ++L + +L E++KA+ E
Sbjct: 499 ERIYDETLRDHYTSLSAELIKAAHE 523
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 150/348 (43%), Gaps = 7/348 (2%)
Query: 153 ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
L L+ C R A+ + MD G PN Y ++ GLC + L+ A + Y M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS 272
+KG D V Y TL+ L G++ +A +L ++++ + + L +
Sbjct: 211 ----EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 273 DGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRA 332
+G +E + L E + + VP++ +YN++ + +A + M +G P
Sbjct: 267 EGNLLEA-RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 333 IFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNK 392
+ + CK RV++ +K+ E M + ++ YN L+ G + N+
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCE-MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 393 MSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLG 452
M G + D TY ILL+ LC + +A ++E + +YN +I+GLC
Sbjct: 385 MVD-CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 453 RQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+ EA + +G P+ + ++ S C + + + ++ R++
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 12/291 (4%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y T+IS L SGR + ++ M + + F + I+ + G + EA L+K +
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSCGWEVKSRVHALNLLMYALCGK 164
+ + V ++N+L+ L A +F V C +V + N L+ C
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT----YNTLITGFCKS 337
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
R + +++F EM YQG + +Y L+ G C G+L+ A +F R+ G D
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ----KVFNRMVDCGVSPD 393
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
IV Y LLD LC +GK E+A+ ++ + + + YN + C + ++ L
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK-LKEAWCLF 452
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFE 335
KG P +Y M L + EADK+ M++ GF P+ I++
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 177/405 (43%), Gaps = 12/405 (2%)
Query: 97 DEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF--VDNSCGWEVKSRVHAL 154
D+A +LF + Q + F +L ++ ++ + L+ ++N + +++
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMEN---LGISHDLYSF 117
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
+L++ C R LAL + +M G P+ + L+ G C R EA L+ SM
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM-- 175
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
G ++V+Y T+++ LC++ A+E+ + +KG++A YN L + G
Sbjct: 176 --DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
R + RL+ + + + P++ + A+ E + EA + EM R P +
Sbjct: 234 RWTDAA-RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
+ + C + +A K + + MV+ C P+ YN L+ ++ +M+
Sbjct: 293 NSLINGFCIHGCLGDA-KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
+ G D TY L+ C+ + A ++ +M P +YN L+ LC+ G+
Sbjct: 352 YQ-GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+A++ +ED+ +I + + C + +K + +F L
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/479 (22%), Positives = 212/479 (44%), Gaps = 29/479 (6%)
Query: 36 SRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCE-CKDTVFASAINIYANAG 94
++ P+Y H+ VY +M+ IL + G + +IE+MR+++ + + +F + +A+A
Sbjct: 138 AKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASAD 197
Query: 95 LVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHAL 154
+V +AI + +P+F F LL + ++ A LF D + V R
Sbjct: 198 MVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRY--F 255
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
L+Y C G+ A + +M+ G P+ Y L+ G + G++ +A LL M
Sbjct: 256 TSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDM-- 313
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
++G + Y L+ ALC+ + EEA+++ ++ R +A Y L C G
Sbjct: 314 --RRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG 371
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
+ I+ ++ + + KG +PS +Y + V + +E +++ +M+ + P I+
Sbjct: 372 K-IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIY 430
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKM- 393
+ CK+ V EA+++ E M P + + I++ L + G + +M
Sbjct: 431 NVVIRLACKLGEVKEAVRLWNE-MEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMV 489
Query: 394 SKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCAD----------SYNS 443
++ + + T +LL + ++++ LE + K W C S+
Sbjct: 490 TRGLFSVSQYGTLKLLLNTVLKDKK-LEMA--------KDVWSCITSKGACELNVLSWTI 540
Query: 444 LIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRSL 502
I L S G + EA + +MI +P+ + L L + + EI ++R++
Sbjct: 541 WIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNM 599
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 171/389 (43%), Gaps = 32/389 (8%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
A +F + + R+P N + +++ G++ E + V+ QM + E + +
Sbjct: 237 AAKLFEDMRMRFPV---NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNL 293
Query: 87 INIYANAGLVDEAITLFKNI------PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD 140
++ YANAG + +A L +++ P NC + L+Q + DR+E A +FV+
Sbjct: 294 LSGYANAGKMADAYDLLRDMRRRGFEPNANC------YTVLIQALCKVDRMEEAMKVFVE 347
Query: 141 NSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDG 200
+E ++ V L+ C G+ D + +M +G P+ +Y +M + H+
Sbjct: 348 ME-RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIM--VAHEK 404
Query: 201 RLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPK 260
+ E+ + ++ Q DI +Y ++ C+ G+ +EA+ + +++ GL
Sbjct: 405 K--ESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGV 462
Query: 261 RCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYS---ESKIDEADK 317
+ + S G +E + + ++ + S+S Y + + L + + K++ A
Sbjct: 463 DTFVIMINGLASQGCLLEASDHF--KEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKD 520
Query: 318 VIVEMQDRGFKPTRAI-FEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKN 376
V + +G + + + AL EA E M+ ++ +P + + L+K
Sbjct: 521 VWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIE-MIEMDFMPQPDTFAKLMKG 579
Query: 377 LRNVGNSAAVLESLNKMSKKV-GCTADRE 404
L+ + N E ++++KV A+RE
Sbjct: 580 LKKLYNR----EFAGEITEKVRNMAAERE 604
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 128/267 (47%), Gaps = 11/267 (4%)
Query: 10 TPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIE 69
+PT + ++I +Q +P+ A IF+ A S+ P + H+ + +I LG + DV+
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYA-SQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLA 108
Query: 70 QMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSE- 128
+ R +F I +YA A L ++ ++ F + +FN + N +L ++VS
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 129 DRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDS 188
L+ A LF +S V + NLLM A C +A Q+F +M + P+ DS
Sbjct: 169 GYLQKAFELF-KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 189 YAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEIL 248
Y IL++G C G+++ A LL M KG V RTL+ LC+ G F+E + L
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDML----NKG----FVPDRTLIGGLCDQGMFDEGKKYL 279
Query: 249 SKILRKGLKAPKRCYNRLDLSQCSDGR 275
+++ KG N L CS G+
Sbjct: 280 EEMISKGFSPHFSVSNCLVKGFCSFGK 306
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 352 KVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLE 411
K++E D+V P+ + Y IL++ G +E L+ M K G DR L+
Sbjct: 215 KMLERDVV-----PDVDSYKILIQGFCRKGQVNGAMELLDDMLNK-GFVPDR----TLIG 264
Query: 412 MLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLP 471
LC + + E + LE+M K + P N L+KG CS G+ EA +E ++ G+
Sbjct: 265 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
Query: 472 EISVWKSLASLFCN 485
W+ + L CN
Sbjct: 325 HSDTWEMVIPLICN 338
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 363 CLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEA 422
+PN+ YN+L++ + + + KM ++ D ++Y IL++ CR+ + A
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER-DVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 423 SQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASL 482
+LL+ M K + P +LI GLC G E +LE+MIS+G P SV L
Sbjct: 245 MELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 300
Query: 483 FCNL 486
FC+
Sbjct: 301 FCSF 304
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 316 DKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLK 375
D V+ + + G+ T IF + + +++ E + M+ N P + N +L
Sbjct: 104 DDVLAKHRSSGYPLTGEIFTYLIKVYAE-AKLPEKVLSTFYKMLEFNFTPQPKHLNRILD 162
Query: 376 NLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYW 435
L + L K S+ G + +Y +L++ C A QL +M +
Sbjct: 163 VLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV 222
Query: 436 PCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
P DSY LI+G C G+ A+ L+DM+++G +P+ ++ L
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGL 266
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 192/441 (43%), Gaps = 47/441 (10%)
Query: 97 DEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNL 156
++A+TLF ++ + + + F+ LL + ++ EA LF + +++
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEM-LGISHDLYSFTT 119
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
L+ C R LAL +M G P+ ++ L+ G CH R +EA S+ +I
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM----SLVDQI 175
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL---------- 266
G ++V+Y T++D+LCE G+ A+++L + + G++ YN L
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 267 -----------------DLSQCSDGRDIEGTKRLIHEA------LIKGSV-PSLSSYNAM 302
D+ S D+ G + + EA +I+ SV P++ +YN++
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 303 AVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIK---VIEEDMV 359
L +DEA KV+ + +GF P + + CK RVD+ +K V+ D V
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 360 AVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRY 419
++ YN L + G +A + L +M G D T+ ILL+ LC +
Sbjct: 356 D----GDTFTYNTLYQGYCQAGKFSAAEKVLGRMV-SCGVHPDMYTFNILLDGLCDHGKI 410
Query: 420 LEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
+A LE + +YN +IKGLC + +A + +G P++ + ++
Sbjct: 411 GKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITM 470
Query: 480 ASLFCNLEMMKASSEIFNRLR 500
+ + + E++ +++
Sbjct: 471 MIGLRRKRLWREAHELYRKMQ 491
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 111/283 (39%), Gaps = 43/283 (15%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y ++I+ L SG G ++ M + F++ I++Y G + EA
Sbjct: 222 YNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA-------- 273
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS 167
+ +N ++Q V + N L+ LC G
Sbjct: 274 -------KKQYNEMIQ---------------------RSVNPNIVTYNSLINGLCIHGLL 305
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVV 227
D A ++ + +G +PN +Y L+ G C R+ + +L M S+ G D
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM----SRDGVDGDTFT 361
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEA 287
Y TL C+ GKF A ++L +++ G+ +N L C G+ + RL E
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL--ED 419
Query: 288 LIKG-SVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKP 329
L K +V + +YN + L K+++A + + +G P
Sbjct: 420 LQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSP 462
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Query: 357 DMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRE 416
DM + LP+ ++ LL + + AV+ SL + + +G + D ++ L++ CR
Sbjct: 69 DMAESHPLPSIVDFSRLLIAIAKLNKYEAVI-SLFRHLEMLGISHDLYSFTTLIDCFCRC 127
Query: 417 RRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVW 476
R A L +M + P ++ SL+ G C + R YEA+ ++ ++ G P + ++
Sbjct: 128 ARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIY 187
Query: 477 KSLASLFCNLEMMKASSEIFNRLRSL 502
++ C + + ++ ++ +
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKM 213
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 185/448 (41%), Gaps = 53/448 (11%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y +++ +G E VIE M + + + I+ Y AG DEA+ LF ++
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD---NSCGWEVKSRVHALNLLMYALCG 163
+ CV T ++N +L ++ + R + D N C S A M ALCG
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC-----SPNRATWNTMLALCG 467
Query: 164 -KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
KG ++F+EM G P+RD++ L+ G +A+ M+ +++ G
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK----MYGEMTRAGFN 523
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
+ Y LL+AL G + ++S + KG K + Y+ L L + G + G +R
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS-LMLQCYAKGGNYLGIER 582
Query: 283 LIHEALIKGSV-PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
I + +G + PS + + + + +++ + G+KP IF + ++
Sbjct: 583 -IENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
+ + D+A +LES+ ++ G +
Sbjct: 642 TRNNMYDQA---------------------------------EGILESI----REDGLSP 664
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
D TY L++M R +A ++L+ + P SYN++IKG C G EAV L
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Query: 462 EDMISQGKLPEISVWKSLASLFCNLEMM 489
+M +G P I + + S + + M
Sbjct: 725 SEMTERGIRPCIFTYNTFVSGYTAMGMF 752
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 2/278 (0%)
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
D+ Y T+L A GK+E+AI++ ++ G YN + GR +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCK 343
+ E KG + + + E + EA + E++ G++P + A + K
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 344 VSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADR 403
EA+ V++E M +C +S YN L+ G S + M+KK G +
Sbjct: 329 AGVYTEALSVLKE-MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK-GVMPNA 386
Query: 404 ETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLED 463
TY +++ + + EA +L M P +YN+++ L R E + L D
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 464 MISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
M S G P + W ++ +L N M K + +F ++S
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKS 484
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 205/463 (44%), Gaps = 25/463 (5%)
Query: 43 HNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
H+ + MI +LG +L R ++ M + + +F I Y AG+V E++ +
Sbjct: 148 HDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKI 207
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
F+ + +S+N+L ++++ R A F + V+ H NL+++
Sbjct: 208 FQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF-NKMVSEGVEPTRHTYNLMLWGFF 266
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN- 221
R + AL+ F++M +G P+ ++ ++ G C ++ EA L M KGN
Sbjct: 267 LSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM------KGNK 320
Query: 222 -GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
G +V Y T++ + ++ + I ++ G++ Y+ L C G+ +E
Sbjct: 321 IGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA- 379
Query: 281 KRLIHEALIKGSVPSLSS-YNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
K ++ + K P +S + + V + A +V+ M + +
Sbjct: 380 KNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIE 439
Query: 340 ALCKVSRVDEAIK----VIEEDMV-----AVNCLPNSEVYNILLKNLRNVGNSAAVLESL 390
CK S + AIK +IE++++ + P++ YN +++ L N G +A E L
Sbjct: 440 NQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKA-EVL 496
Query: 391 NKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCS 450
+ K G D++ L+ +E + ++L+ MS + +++Y LIK S
Sbjct: 497 FRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMS 555
Query: 451 LGRQYEAVMWLEDMISQGKLPEISVWKS-LASLFCNLEMMKAS 492
G +A L+ M+ G +P+ S+++S + SLF + + AS
Sbjct: 556 KGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTAS 598
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 2/188 (1%)
Query: 312 IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
+ E+ K+ +M+D G + T + + + + R A + + MV+ P YN
Sbjct: 201 VQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNK-MVSEGVEPTRHTYN 259
Query: 372 ILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSI 431
++L L M K G + D T+ ++ CR ++ EA +L +M
Sbjct: 260 LMLWGFFLSLRLETALRFFEDM-KTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKG 318
Query: 432 KSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKA 491
P SY ++IKG ++ R + + E+M S G P + + +L C+ M
Sbjct: 319 NKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVE 378
Query: 492 SSEIFNRL 499
+ I +
Sbjct: 379 AKNILKNM 386
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 188/450 (41%), Gaps = 31/450 (6%)
Query: 59 GRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSF 118
GRL E ++ M+ + I GL++ A +F + V + S+
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 119 NTLLQIMVSEDRLEAA---------HGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDL 169
++ + +++ A G DN+ L++ ALC G +
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNA----------TCTLILTALCENGLVNR 270
Query: 170 ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYR 229
A+ F++M G PN ++ L+ GLC G + +A +L M + G ++ +
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV----RNGWKPNVYTHT 326
Query: 230 TLLDALCEDGKFEEAIEILSKILRKGLKAPK-RCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
L+D LC+ G E+A + K++R P Y + C + + + + L
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK-LNRAEMLFSRMK 385
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
+G P++++Y + A +++ M D GF P + A + +LCK SR
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 349 EAIKVIEEDMVAVNCLPNSE--VYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETY 406
EA +++ + A +C ++ Y IL++ + L +M+K G AD
Sbjct: 446 EAYELLNK---AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNK-TGFEADMRLN 501
Query: 407 IILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMIS 466
IL+ CR+++ E+ +L + + P ++Y S+I C G A+ + +M
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 467 QGKLPEISVWKSLASLFCNLEMMKASSEIF 496
G +P+ + SL S C M+ + +++
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLY 591
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 182/410 (44%), Gaps = 18/410 (4%)
Query: 94 GLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSCGWEVKSR 150
GLV+ AI F+ + +F +L+ + + ++ A + V N GW K
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN--GW--KPN 321
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCY-PNRDSYAILMKGLCHDGRLHEATHLL 209
V+ L+ LC +G ++ A ++F ++ Y PN +Y ++ G C + +L+ A L
Sbjct: 322 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML- 380
Query: 210 YSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLS 269
F R+ ++G ++ Y TL++ C+ G F A E+++ + +G YN S
Sbjct: 381 ---FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 270 QCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKP 329
C R E + L+++A G +Y + + ++ I++A M GF+
Sbjct: 438 LCKKSRAPEAYE-LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496
Query: 330 TRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLES 389
+ +AA C+ ++ E+ ++ + +V++ +P E Y ++ G+ L+
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQL-VVSLGLIPTKETYTSMISCYCKEGDIDLALKY 555
Query: 390 LNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLC 449
+ M K+ GC D TY L+ LC++ EA +L E M + P + +L C
Sbjct: 556 FHNM-KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC 614
Query: 450 SLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
A++ LE + K I ++L C+ + + ++ F +L
Sbjct: 615 KRNDSANAMILLEPL---DKKLWIRTVRTLVRKLCSEKKVGVAALFFQKL 661
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/467 (20%), Positives = 192/467 (41%), Gaps = 23/467 (4%)
Query: 18 IRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCE 77
+ ++ M AL F A + K+ H +Y L +G L + +V+ M ++
Sbjct: 101 LASESGSMVALCFFYWAVG-FEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRN--- 156
Query: 78 CKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL 137
++ G ++EA+ + ++ + + N +L+I V +E A +
Sbjct: 157 ------------FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENV 204
Query: 138 FVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLC 197
F + S V + L++ G+ A + M +G P+ + +++ LC
Sbjct: 205 FDEMSVRGVVPDS-SSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC 263
Query: 198 HDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
+G ++ A F ++ G +++ + +L+D LC+ G ++A E+L +++R G K
Sbjct: 264 ENGLVNRAIWY----FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWK 319
Query: 258 APKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADK 317
+ L C G + + + P++ +Y +M E K++ A+
Sbjct: 320 PNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEM 379
Query: 318 VIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL 377
+ M+++G P + + CK A +++ M +PN YN + +L
Sbjct: 380 LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNL-MGDEGFMPNIYTYNAAIDSL 438
Query: 378 RNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPC 437
+ E LNK + G AD TY IL++ C++ +A +M+ +
Sbjct: 439 CKKSRAPEAYELLNK-AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 438 ADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
N LI C + E+ + ++S G +P + S+ S +C
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYC 544
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 4/272 (1%)
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
V R +L E G+ EA+ ++ + +GL P L + IE + + E
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGL-TPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
++G VP SSY M + + + KI EAD+ + M RGF P A + ALC+
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETY 406
V+ AI + M+ + PN + L+ L G+ E L +M + G + T+
Sbjct: 268 VNRAIWYFRK-MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN-GWKPNVYTH 325
Query: 407 IILLEMLCRERRYLEASQL-LEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
L++ LC+ +A +L L+ + +Y P +Y S+I G C + A M M
Sbjct: 326 TALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Query: 466 SQGKLPEISVWKSLASLFCNLEMMKASSEIFN 497
QG P ++ + +L + C + E+ N
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 417
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 8/293 (2%)
Query: 64 MRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQ 123
R ++ +R D+ + + S I Y ++ A LF + + ++ TL+
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 124 IMVSEDRLEAAHGLFVDNSCGWE-VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGC 182
A+ L N G E ++ N + +LC K R+ A ++ + G
Sbjct: 402 GHCKAGSFGRAYELM--NLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Query: 183 YPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFE 242
+ +Y IL++ C +++A + F R+++ G D+ + L+ A C K +
Sbjct: 460 EADGVTYTILIQEQCKQNDINQA----LAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 243 EAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAM 302
E+ + ++ GL K Y + C +G DI+ + H G VP +Y ++
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEG-DIDLALKYFHNMKRHGCVPDSFTYGSL 574
Query: 303 AVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
L +S +DEA K+ M DRG P CK + A+ ++E
Sbjct: 575 ISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 172/400 (43%), Gaps = 16/400 (4%)
Query: 86 AINIYANAGLVDE-AITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCG 144
A N+ +A DE A +F+++ + +C ++ +++ M + + A GLF +
Sbjct: 240 AYNMLLDALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLF-NEMIT 298
Query: 145 WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHE 204
+ V N LM L D A+Q+F M GC PN +Y++L+ L +G+L
Sbjct: 299 EGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVR 358
Query: 205 ATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN 264
++ IS++ + I Y L+ L + G EA + + +K + Y
Sbjct: 359 LDGVV-----EISKRYMTQGI--YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYM 411
Query: 265 RLDLSQCSDGRDIEGTKRL--IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM 322
+ S C G+ IE + L IHE KG V YN + L +I + +M
Sbjct: 412 SMLESLCGAGKTIEAIEMLSKIHE---KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 323 QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN 382
+ G P + +A+ +V VDEAI + EE + +C P+ YN L+ L G+
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE-LERSDCKPDIISYNSLINCLGKNGD 527
Query: 383 SAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYN 442
+M +K G D TY L+E + R A L E+M +K P +YN
Sbjct: 528 VDEAHVRFKEMQEK-GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586
Query: 443 SLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASL 482
L+ L GR EAV M QG P+ + L L
Sbjct: 587 ILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERL 626
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 220/506 (43%), Gaps = 46/506 (9%)
Query: 10 TPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGP-VYATMISILGTSG---RLGEMR 65
TP S+I+++ +P+ A+ F S P Y+ N P +Y +I IL S R +R
Sbjct: 98 TPDEASEILKSLNSPLLAVEFFKLVPSLCP-YSQNDPFLYNRIILILSRSNLPDRFDRVR 156
Query: 66 DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFN-CV----NWTQSFNT 120
+++ M + N++ N V+ I F N C+ W N+
Sbjct: 157 SILDSMVKS-------------NVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNS 203
Query: 121 -----LLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQ 175
LLQ + A ++ + G K + A N+L+ AL + + A Q+F+
Sbjct: 204 FTYKCLLQAYLRSRDYSKAFDVYCEIRRGGH-KLDIFAYNMLLDAL---AKDEKACQVFE 259
Query: 176 EMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDAL 235
+M + C + +Y I+++ + G+ EA L M +G ++V Y TL+ L
Sbjct: 260 DMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMI----TEGLTLNVVGYNTLMQVL 315
Query: 236 CEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR--DIEGTKRLIHEALIKGSV 293
+ ++AI++ S+++ G + + Y+ L ++G+ ++G + + +G
Sbjct: 316 AKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGI- 374
Query: 294 PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV 353
Y+ + L + EA ++ +M K R + + + +LC + EAI++
Sbjct: 375 -----YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 354 IEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEML 413
+ + + + ++ +YN + L + + + + KM KK G + D TY IL+
Sbjct: 430 LSK-IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM-KKDGPSPDIFTYNILIASF 487
Query: 414 CRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEI 473
R EA + E++ P SYNSLI L G EA + ++M +G P++
Sbjct: 488 GRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDV 547
Query: 474 SVWKSLASLFCNLEMMKASSEIFNRL 499
+ +L F E ++ + +F +
Sbjct: 548 VTYSTLMECFGKTERVEMAYSLFEEM 573
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 5/185 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+Y T+ S LG ++ + D+ E+M++D + I + G VDEAI +F+ +
Sbjct: 444 MYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL 503
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ +C S+N+L+ + ++ AH F + + V + LM R
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ-EKGLNPDVVTYSTLMECFGKTER 562
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
++A +F+EM +GC PN +Y IL+ L +GR EA L + ++ Q+G D +
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDL----YSKMKQQGLTPDSI 618
Query: 227 VYRTL 231
Y L
Sbjct: 619 TYTVL 623
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 157/407 (38%), Gaps = 57/407 (14%)
Query: 99 AITLFKNIPQFNCVNWTQSF--NTLLQIMVSE---DRLEAAHGLFVDNSCGWEVKSRVHA 153
A+ FK +P + F N ++ I+ DR + + +D+ V +
Sbjct: 115 AVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSI-LDSMVKSNVHGNIST 173
Query: 154 LNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMF 213
+N+L+ + L++ ++ D + N +Y L++ +A + ++
Sbjct: 174 VNILIGFFGNTEDLQMCLRLVKKWDLKM---NSFTYKCLLQAYLRSRDYSKA----FDVY 226
Query: 214 WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSD 273
I + G+ DI Y LLDAL +D K + E + K + C
Sbjct: 227 CEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKK---------RHC----------- 266
Query: 274 GRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAI 333
R E T Y M + K DEA + EM G
Sbjct: 267 -RRDEYT------------------YTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVG 307
Query: 334 FEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKM 393
+ + L K VD+AI+V MV C PN Y++LL NL L+ + ++
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSR-MVETGCRPNEYTYSLLL-NLLVAEGQLVRLDGVVEI 365
Query: 394 SKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGR 453
SK+ + Y L+ L + EA +L M DSY S+++ LC G+
Sbjct: 366 SKRY---MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGK 422
Query: 454 QYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
EA+ L + +G + + ++ ++ S L+ + ++F +++
Sbjct: 423 TIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK 469
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 179/448 (39%), Gaps = 59/448 (13%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N +Y I L ++ E + E M++ +++ I+ Y G V +A L+
Sbjct: 233 NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY 292
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCG 163
K I + F TL+ L A LFV + + V ++ N L++ C
Sbjct: 293 KEILVAELLPNVVVFGTLVDGFCKARELVTARSLFV-HMVKFGVDPNLYVYNCLIHGHCK 351
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
G A+ + EM+ P+ +Y IL+ GLC + ++ EA R+ QK E
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN--------RLFQKMKNE 403
Query: 224 DI----VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG----R 275
I Y +L+ C++ E+A+++ S++ G++ N + S DG R
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP-----NIITFSTLIDGYCNVR 458
Query: 276 DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFE 335
DI+ L E IKG VP + +Y A+ + E+ + EA ++ +M + G P F
Sbjct: 459 DIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFA 518
Query: 336 AKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSK 395
V K R+ AI +E+ +C +VG
Sbjct: 519 CLVDGFWKEGRLSVAIDFYQENNQQRSC-------------WNHVG-------------- 551
Query: 396 KVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQY 455
+ L+E LC+ L AS+ M P SY S++KG R
Sbjct: 552 ----------FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRIT 601
Query: 456 EAVMWLEDMISQGKLPEISVWKSLASLF 483
+ +M DMI G LP + V + LA +
Sbjct: 602 DTMMLQCDMIKTGILPNLLVNQLLARFY 629
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 158/350 (45%), Gaps = 12/350 (3%)
Query: 148 KSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATH 207
K + +LL+ G + AL + +EM C P+ + ++ GL R
Sbjct: 129 KFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDS--- 182
Query: 208 LLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLD 267
++ + + +G D+ +Y L + G + + ++L ++ G+K Y
Sbjct: 183 -VWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYI 241
Query: 268 LSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSES-KIDEADKVIVEMQDRG 326
L C D + +E +++ G +P+L +Y+AM +D Y ++ + +A + E+
Sbjct: 242 LDLCRDNK-MEEAEKMFELMKKHGVLPNLYTYSAM-IDGYCKTGNVRQAYGLYKEILVAE 299
Query: 327 FKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAV 386
P +F V CK + A + + MV PN VYN L+ GN
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTA-RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEA 358
Query: 387 LESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIK 446
+ L++M + + + D TY IL+ LC E + EA++L ++M + +P + +YNSLI
Sbjct: 359 VGLLSEM-ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 447 GLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIF 496
G C +A+ +M + G P I + +L +CN+ +KA+ ++
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 164/397 (41%), Gaps = 25/397 (6%)
Query: 123 QIMVSEDRLEAAHGLFVDNSCGWE------------------VKSRVHALNLLMYALCGK 164
Q+M+S + H FV C ++ +K V+ + + LC
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
+ + A ++F+ M G PN +Y+ ++ G C G + +A Y ++ I +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA----YGLYKEILVAELLPN 303
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
+VV+ TL+D C+ + A + +++ G+ YN L C G +E L+
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVG-LL 362
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
E P + +Y + L E ++ EA+++ +M++ P+ A + + + CK
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
+++A+ + E M A PN ++ L+ NV + A + +M+ K G D
Sbjct: 423 YNMEQALDLCSE-MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK-GIVPDVV 480
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
TY L++ +E EA +L M P ++ L+ G GR A+ + ++
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN 540
Query: 465 ISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
Q + L C + +S F+ +RS
Sbjct: 541 NQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRS 577
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 187/431 (43%), Gaps = 19/431 (4%)
Query: 70 QMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSED 129
+M + S E +F + I+ + G++D+ +F + + + +++ ++ E
Sbjct: 297 RMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG 356
Query: 130 RLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSY 189
++ A LFV+N+ ++ VH L++ KG D A+ + M G P+ +Y
Sbjct: 357 NVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Query: 190 AILMKGL--CHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIE- 246
+L+K L CH+ L Y+M S NG I ++D L G E +E
Sbjct: 417 FVLLKMLPKCHE--------LKYAMVILQSILDNGCGI--NPPVIDDL---GNIEVKVES 463
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
+L +I RK + + CS I R I + + G P SYN++ L
Sbjct: 464 LLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSR-IEKMVNLGCTPLPFSYNSVIKCL 522
Query: 307 YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPN 366
+ E+ I++ ++ +Q+ F P + V LCK + D A +I+ M + P
Sbjct: 523 FQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDA-MEELGLRPT 581
Query: 367 SEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLL 426
+Y+ ++ +L G E+ KM + G D Y+I++ R R EA++L+
Sbjct: 582 VAIYSSIIGSLGKQGRVVEAEETFAKMLES-GIQPDEIAYMIMINTYARNGRIDEANELV 640
Query: 427 EQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNL 486
E++ P + +Y LI G +G + +L+ M+ G P + ++ +L F
Sbjct: 641 EEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKK 700
Query: 487 EMMKASSEIFN 497
K S +F
Sbjct: 701 GDFKFSFTLFG 711
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 146/352 (41%), Gaps = 14/352 (3%)
Query: 98 EAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGW-EVKSRVHALNL 156
EA F+ + + W L + + L A G+ +D CG + V+
Sbjct: 184 EAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGM-LDTLCGMTRMPLPVNLYKS 242
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
L Y C +G + A +F M+ G Y ++ Y LMK C D + A L + R+
Sbjct: 243 LFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRL----YLRM 298
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
++ D ++ TL+ + G ++ + S++++KG+++ Y+ + S C +G
Sbjct: 299 VERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNV 358
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
+ ++ + ++ Y + Y + +D+A +++ M D G P +
Sbjct: 359 DYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFV 418
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
+ L K + A+ VI + ++ C N V + ++GN +ESL +
Sbjct: 419 LLKMLPKCHELKYAM-VILQSILDNGCGINPPVID-------DLGNIEVKVESLLGEIAR 470
Query: 397 VGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGL 448
++ LC +R Y+ A +E+M P SYNS+IK L
Sbjct: 471 KDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCL 522
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 172/435 (39%), Gaps = 68/435 (15%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+Y+++I LG GR+ E + +M + + + + IN YA G +DEA L + +
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV 643
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHAL--NLLMY-ALCG 163
+ + ++ L+ V +E C + K L N+++Y AL G
Sbjct: 644 VKHFLRPSSFTYTVLISGFVKMGMME--------KGCQYLDKMLEDGLSPNVVLYTALIG 695
Query: 164 ----KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
KG + +F M + +Y L+ GL WR +
Sbjct: 696 HFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL-----------------WRAMAR 738
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKG--LKAPKRCYNRLDLSQCSDGRDI 277
++V E GK + +L +++R + P N
Sbjct: 739 KKKRQVIV---------EPGKEK----LLQRLIRTKPLVSIPSSLGNY------------ 773
Query: 278 EGTKRLIHEAL---IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
G+K E + K +P+L +N + + ++DEA + MQ G P +
Sbjct: 774 -GSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTY 832
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
+ + + ++ AI + E NC P+ +Y+ LLK L + L + +M
Sbjct: 833 TILMKSHIEAGDIESAIDLFE----GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQ 888
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
K G ++++Y LL+ LC R +EA ++++ M+ WP + ++ LI LC +
Sbjct: 889 KS-GINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKL 947
Query: 455 YEAVMWLEDMISQGK 469
EA M+ G+
Sbjct: 948 REARALFAIMVQSGR 962
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 143/345 (41%), Gaps = 34/345 (9%)
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
GR D A ++ +E+ P+ +Y +L+ G G + + L M + G +
Sbjct: 631 GRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKML----EDGLSPN 686
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQC--SDGRD------ 276
+V+Y L+ + G F+ + + + +K Y L LS + R
Sbjct: 687 VVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITL-LSGLWRAMARKKKRQVI 745
Query: 277 IEGTKRLIHEALIKG----SVPS-LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTR 331
+E K + + LI+ S+PS L +Y + + ++ I + K I+ P
Sbjct: 746 VEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKS---FAMEVIGKVKKSII--------PNL 794
Query: 332 AIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLN 391
+ + C R+DEA +E M +PN Y IL+K+ G+ +ES
Sbjct: 795 YLHNTIITGYCAAGRLDEAYNHLES-MQKEGIVPNLVTYTILMKSHIEAGD----IESAI 849
Query: 392 KMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSL 451
+ + C D+ Y LL+ LC +R L+A L+ +M P DSY L++ LC
Sbjct: 850 DLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYS 909
Query: 452 GRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIF 496
EAV ++DM + P L + C + ++ + +F
Sbjct: 910 RLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/420 (19%), Positives = 159/420 (37%), Gaps = 25/420 (5%)
Query: 50 TMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQF 109
++I LG G L R+VI ++ S + A+ + +A VD I L
Sbjct: 48 SLIVKLGRRGLLDSAREVIRRVIDGSSSISE---AALVADFA----VDNGIEL------- 93
Query: 110 NCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDL 169
+ + L++ + + A + G + L+ +++ L R D
Sbjct: 94 ----DSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 170 ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYR 229
A + G P+R+S ++++ LC+ R EA H F ++ ++G+G + +
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHC----FEQVKERGSGLWLWCCK 205
Query: 230 TLLDALCEDGKFEEAIEILSKIL-RKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
L LC G EAI +L + + P Y L C G E H
Sbjct: 206 RLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHME- 264
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
+ G Y + + ++ + A ++ + M +R F+ IF + K+ +D
Sbjct: 265 VDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLD 324
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
+ +V+ M+ N Y+I++ + GN L + + + Y
Sbjct: 325 KG-RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTN 383
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
L+ ++ +A LL +M P +Y L+K L A++ L+ ++ G
Sbjct: 384 LIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 310 SKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEV 369
S I EA V D G + + + A + L ++ + A + ++ +P+S V
Sbjct: 74 SSISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSV 133
Query: 370 YNIL---LKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLL 426
+ + L LR + A L+ + G R + ++++ LC + R+LEA
Sbjct: 134 LDSMVFCLVKLRRFDEARAHLDRI----IASGYAPSRNSSSLVVDELCNQDRFLEAFHCF 189
Query: 427 EQMSIKS----YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLP-EISVWKSLAS 481
EQ+ + W C L KGLC G EA+ L+ + ++P ++++KSL
Sbjct: 190 EQVKERGSGLWLWCC----KRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFY 245
Query: 482 LFCNLEMMKASSEIFNRL 499
FC + +F+ +
Sbjct: 246 CFCKRGCAAEAEALFDHM 263
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 162/404 (40%), Gaps = 38/404 (9%)
Query: 26 KALHIFNEAKSRYPKYTHNGP-VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFA 84
++L FN A SR Y H P Y MI + G + +I+ M+ + E F
Sbjct: 132 QSLAFFNWATSR-DDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFT 190
Query: 85 SAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCG 144
I Y AGL EA+ F + + CV +F+ ++ + + R A F +S
Sbjct: 191 ILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF--DSLK 248
Query: 145 WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHE 204
+ V L+ C G A ++F+EM G PN +Y+I++ LC G++
Sbjct: 249 DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISR 308
Query: 205 ATHLLYSM-------------------------------FWRISQKGNGEDIVVYRTLLD 233
A + M + ++ + G D + Y L++
Sbjct: 309 AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 234 ALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV 293
A C D E A+++L+ +++K + +N + RD+ G R+ + +
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCEVNASTFNTI-FRYIEKKRDVNGAHRMYSKMMEAKCE 427
Query: 294 PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV 353
P+ +YN + D K+ EM D+ +P + V C + + A K+
Sbjct: 428 PNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKL 487
Query: 354 IEEDMVAVNCL-PNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
+E MV CL P+ +Y ++L LR G E + KM +K
Sbjct: 488 FKE-MVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQK 530
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 38/303 (12%)
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
CG R + L Q + + +RD Y H++ H Y+ +S K
Sbjct: 121 CGSVRHGIPLH--QSLAFFNWATSRDDYD------------HKSPHP-YNEMIDLSGKVR 165
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA-----PKRCYNRLDLSQCSDGR- 275
D+ + L+D L + E +IE + ++R+ ++A C+NR++ C +
Sbjct: 166 QFDLAWH--LID-LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKI 222
Query: 276 -------DIEGTKRL-----IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
++ +R ++L P + Y + +I EA+KV EM+
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
G +P + + ALC+ ++ A V DM+ C PN+ +N L++ G +
Sbjct: 283 LAGIEPNVYTYSIVIDALCRCGQISRAHDVFA-DMLDSGCAPNAITFNNLMRVHVKAGRT 341
Query: 384 AAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS 443
VL+ N+M KK+GC D TY L+E CR+ A ++L M K A ++N+
Sbjct: 342 EKVLQVYNQM-KKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 444 LIK 446
+ +
Sbjct: 401 IFR 403
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 197/476 (41%), Gaps = 53/476 (11%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y+T+I +G LG + Q + VF+S I++Y +G + A ++K +
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN-SCGWEVKSRVHALNLLMYALCGKGR 166
++ L++ + + R+ A G++ G E ++ + + CG R
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG--ED 224
S AL +++M G P+ Y +L+ GL G + L++M + + G +
Sbjct: 444 SGFAL--YEDMIKMGYPPDVVIYGVLVDGLSKQGLM------LHAMRFSVKMLGQSIRLN 495
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA-----------------------PKR 261
+VV+ +L+D C +F+EA+++ + G+K P
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555
Query: 262 CYNRLDLSQCSD-GRDIEGTKRLIH---------------EALIKGSV-PSLSSYNAMAV 304
DL Q + DI +IH LI+G + P + +YN M
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
S ++DEA+++ ++ F P + LCK + +D AI++ M
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI-MAEKGSK 674
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
PN+ Y L+ + + +M +K G + +Y I+++ LC+ R EA+
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATN 733
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLA 480
+ Q P +Y LI+G C +GR EA + E M+ G P+ + ++L+
Sbjct: 734 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALS 789
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/484 (20%), Positives = 191/484 (39%), Gaps = 86/484 (17%)
Query: 94 GLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLE-------------------AA 134
G+VD+A+ +F Q V S +L ++ DR++ +A
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSA 219
Query: 135 HGLFVDN-SCGWEVKSRVHALNLLM-------YALCGK---GRS----DLALQIFQEMDY 179
HG +D C EV + L+M C K G S ++A ++ +
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLD 279
Query: 180 QGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDG 239
G PN ++ L+ G C G + A + +F + Q+G D++ Y TL+D + G
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRA----FDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 240 KFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSY 299
++ S+ L KG+K ++ G D+ + L +G P++ +Y
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG-DLATASVVYKRMLCQGISPNVVTY 394
Query: 300 NAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMV 359
+ L + +I EA + ++ RG +P+ + + + CK + + EDM+
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF-ALYEDMI 453
Query: 360 AVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII--LLEMLCRER 417
+ P+ +Y +L+ L G +L ++ K +G + + L++ CR
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQG---LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 418 RYLEASQLLEQMSIKSYWPCADSYNSLIK------GLC-----SLGRQYEAVMW------ 460
R+ EA ++ M I P ++ ++++ C ++G Q +M
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISA 570
Query: 461 -----------------LEDM------ISQGKL-PEISVWKSLASLFCNLEMMKASSEIF 496
+ED + +GK+ P+I + ++ +C+L + + IF
Sbjct: 571 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 630
Query: 497 NRLR 500
L+
Sbjct: 631 ELLK 634
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 137/322 (42%), Gaps = 12/322 (3%)
Query: 41 YTHNGPVYATMISILGTSG-RLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
Y + +Y ++ L G L MR ++ + Q S VF S I+ + DEA
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ-SIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSED----RLEAAHGL-FVDNSCGWEVKSRVHAL 154
+ +F+ + + +F T++++ + ED ++ GL D ++ + +
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
N++++ L R + A + F + P+ +Y ++ G C RL EA + F
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI----FE 631
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
+ G + V L+ LC++ + AI + S + KG K Y L + S
Sbjct: 632 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL-MDWFSKS 690
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
DIEG+ +L E KG PS+ SY+ + L ++DEA + + D P +
Sbjct: 691 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 750
Query: 335 EAKVAALCKVSRVDEAIKVIEE 356
+ CKV R+ EA + E
Sbjct: 751 AILIRGYCKVGRLVEAALLYEH 772
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 160/406 (39%), Gaps = 39/406 (9%)
Query: 79 KDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF 138
KD F + ++ G+ D A +F + N + FN L G
Sbjct: 98 KDPSFYTIAHVLIRNGMFDVADKVFDEM----ITNRGKDFNVL--------------GSI 139
Query: 139 VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
D S +V LM C G D AL+IF G +DS ++ L
Sbjct: 140 RDRSLDADV------CKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG 193
Query: 199 DGRLHEATHLLYSMFWRISQKG-NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
R+ L+ F ++ + G + + +LDAL G+ +A++ ++ +G +
Sbjct: 194 SDRVD----LIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFR 249
Query: 258 APKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADK 317
N++ D IE RL+ L G P++ ++ + ++D A
Sbjct: 250 VGIVSCNKVLKGLSVD--QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFD 307
Query: 318 VIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDM---VAVNCLPNSEVYNILL 374
+ M+ RG +P + + K + K+ + + V ++ + S ++ +
Sbjct: 308 LFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYV 367
Query: 375 KNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSY 434
K+ G+ A +M + G + + TY IL++ LC++ R EA + Q+ +
Sbjct: 368 KS----GDLATASVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 435 WPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLA 480
P +Y+SLI G C G EDMI G P++ ++ L
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/518 (22%), Positives = 222/518 (42%), Gaps = 62/518 (11%)
Query: 8 VLTPTYLSQIIRTQKNPMK----ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGE 63
+L+P ++++ T N K A FN A S+ Y ++ Y M SIL + +
Sbjct: 66 ILSPELNTKVVETVLNGFKRWGLAYLFFNWA-SKQEGYRNDMYAYNAMASILSRARQNAS 124
Query: 64 MRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFN-CVNWTQSFNTLL 122
++ ++ + C F I NAGLVDEA ++F + + CV ++N LL
Sbjct: 125 LKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLL 184
Query: 123 Q---------IMVSEDRLEAAH--GLFVDN--------------------SCGWEVKSR- 150
+ + + E RL+ G D S E+ SR
Sbjct: 185 EAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRG 244
Query: 151 ---VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATH 207
H +L+ + C G+ D A ++ + ++ + N +Y +L+ G + R+ +A
Sbjct: 245 WLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKA-- 302
Query: 208 LLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL- 266
+ +F ++ + G DI +Y L+ LC+ E A+ + +I R G+ + +L
Sbjct: 303 --FQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLL 360
Query: 267 -------DLSQCSD---GRDIEGTKRLIHEALIKGSVPSLSSYNAMAV--DLYSESKIDE 314
+LS+ ++ G + + L++++L +G + + + A + +L + D
Sbjct: 361 CSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDG 420
Query: 315 ADKVIVEMQD--RGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNI 372
+++ ++D + P + L K ++VD A+ ++ D+V +P +YN
Sbjct: 421 VSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLL-HDIVQNGLIPGPMMYNN 479
Query: 373 LLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK 432
+++ + G S L+ L +M K G + T + L ++ A LL++M
Sbjct: 480 IIEGMCKEGRSEESLKLLGEM-KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFY 538
Query: 433 SYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL 470
+ P L+K LC GR +A +L+D+ +G L
Sbjct: 539 GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFL 576
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 147/347 (42%), Gaps = 7/347 (2%)
Query: 153 ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
+L++++ L + D+A+ + ++ G P Y +++G+C +GR E+ LL M
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS 272
G + L E F A+++L K+ G + + L C
Sbjct: 501 ----KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 273 DGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRA 332
+GR ++ K L + +G + + + A L +D ++ ++ G P
Sbjct: 557 NGRAVDACKYL-DDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVI 615
Query: 333 IFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNK 392
+ + ALCK R EA ++ +MV+ P YN ++ G L + +
Sbjct: 616 AYHVLIKALCKACRTMEA-DILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVR 674
Query: 393 MSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLG 452
M + D TY L+ LC R EA +M K +P ++ +LI+GLC G
Sbjct: 675 MYEDEK-NPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 453 RQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
EA+++ +M + P+ +V+ SL S F + E + A IF +
Sbjct: 734 WSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREM 780
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 151/343 (44%), Gaps = 41/343 (11%)
Query: 14 LSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQ 73
L+ ++ ++NP + + F +A ++ N VY + L + RL + +++E+ ++
Sbjct: 44 LTSLVNGERNPKRIVEKFKKA-CESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKK 102
Query: 74 DSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEA 133
K+ A I++Y AG+ + A +F+ +P +C SFN LL
Sbjct: 103 YRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALL----------- 151
Query: 134 AHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILM 193
+ + + + L L GK L+++ P+ SY L+
Sbjct: 152 ---------SAYRLSKKFDVVEELFNELPGK----LSIK-----------PDIVSYNTLI 187
Query: 194 KGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILR 253
K LC L EA LL I KG DIV + TLL + G+FE EI +K++
Sbjct: 188 KALCEKDSLPEAVALLDE----IENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVE 243
Query: 254 KGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKID 313
K + R YN L ++ + E L E G P + S+NAM +E K+D
Sbjct: 244 KNVAIDIRTYNARLLGLANEAKSKELVN-LFGELKASGLKPDVFSFNAMIRGSINEGKMD 302
Query: 314 EADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
EA+ E+ G++P +A F + A+CK + AI++ +E
Sbjct: 303 EAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 120/299 (40%), Gaps = 42/299 (14%)
Query: 160 ALCGK-GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQ 218
+L GK G + A ++F+EM + C + S+ L+ + L + ++S
Sbjct: 117 SLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSI 176
Query: 219 KGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
K DIV Y TL+ ALCE EA+ +L +I KGLK +N L LS G+ E
Sbjct: 177 K---PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQ-FE 232
Query: 279 GTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKV 338
+ + + + K + +YNA + L +E+K E + E++ G KP F A +
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 339 AALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVG 398
++DEA E+ K K G
Sbjct: 293 RGSINEGKMDEA-------------------------------------EAWYKEIVKHG 315
Query: 399 CTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEA 457
D+ T+ +LL +C+ + A +L ++ K Y + L+ L ++ EA
Sbjct: 316 YRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEA 374
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 113/281 (40%), Gaps = 22/281 (7%)
Query: 236 CEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDI------------------ 277
CE +F I + + +R+ + A + Y L + RD+
Sbjct: 65 CESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGM 124
Query: 278 -EGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDR-GFKPTRAIFE 335
E +++ E + S+ S+NA+ K D +++ E+ + KP +
Sbjct: 125 FENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYN 184
Query: 336 AKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSK 395
+ ALC+ + EA+ +++E + P+ +N LL + G E KM +
Sbjct: 185 TLIKALCEKDSLPEAVALLDE-IENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVE 243
Query: 396 KVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQY 455
K D TY L L E + E L ++ P S+N++I+G + G+
Sbjct: 244 K-NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMD 302
Query: 456 EAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIF 496
EA W ++++ G P+ + + L C +++ E+F
Sbjct: 303 EAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 152/349 (43%), Gaps = 19/349 (5%)
Query: 153 ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
A +++++ LC G+ D+AL ++ EM + PN ++ L+ GLC G L EA LL S+
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS 272
G DIV+Y ++D + G EEA+E+ ++ G+ +N L C
Sbjct: 460 I----SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 273 DGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSE-SKIDEADKVIVEMQDRGFKPTR 331
++I ++++ + G PS+ SY + +D Y+ D++ EM+ G PT
Sbjct: 516 T-QNIAEARKILDVIKLYGLAPSVVSYTTL-MDAYANCGNTKSIDELRREMKAEGIPPTN 573
Query: 332 AIFEAKVAALCKVSRVDEAIKVIEE-----------DMVAVNCLPNSEVYNILLKNLRNV 380
+ LC+ + + V+ E DM + P+ YN +++ L V
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633
Query: 381 GNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADS 440
+ + L M K A TY IL++ LC +A + + ++ +
Sbjct: 634 KHLSGAFVFLEIM-KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 692
Query: 441 YNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMM 489
Y +LIK C G AV ++ +G I + ++ + C +M
Sbjct: 693 YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLM 741
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 207/508 (40%), Gaps = 47/508 (9%)
Query: 30 IFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSC-----ECKDTVFA 84
F E + Y + H+ + +L R E++ ++EQ+ Q+ E V+
Sbjct: 70 FFKELRDIYA-FRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWD 128
Query: 85 SAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRL-----------EA 133
+ + + +VD+++ + K + N TQS+N++L D++ E
Sbjct: 129 MLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH 188
Query: 134 AHGLFVDNSC---------------GW-EVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
+ VD C W ++ V + N +M C G D+A F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
G P+ S+ IL+ GLC G + EA L M ++ G D V Y L
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDM----NKHGVEPDSVTYNILAKGFHL 304
Query: 238 DGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG-SVPSL 296
G A E++ +L KGL Y L QC G +I+ L+ + L +G + S+
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG-NIDMGLVLLKDMLSRGFELNSI 363
Query: 297 SSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+ M L +IDEA + +M+ G P + + LCK+ + D A+ + +E
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 357 DMVAVNCLPNSEVYNILLKNLRNVG---NSAAVLESLNKMSKKVGCTADRETYIILLEML 413
M LPNS + LL L G + ++L+SL G T D Y I+++
Sbjct: 424 -MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL----ISSGETLDIVLYNIVIDGY 478
Query: 414 CRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEI 473
+ EA +L + + P ++NSLI G C EA L+ + G P +
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 474 SVWKSLASLFCNLEMMKASSEIFNRLRS 501
+ +L + N K+ E+ +++
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKA 566
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 152/349 (43%), Gaps = 19/349 (5%)
Query: 153 ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
A +++++ LC G+ D+AL ++ EM + PN ++ L+ GLC G L EA LL S+
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS 272
G DIV+Y ++D + G EEA+E+ ++ G+ +N L C
Sbjct: 460 I----SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 273 DGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSE-SKIDEADKVIVEMQDRGFKPTR 331
++I ++++ + G PS+ SY + +D Y+ D++ EM+ G PT
Sbjct: 516 T-QNIAEARKILDVIKLYGLAPSVVSYTTL-MDAYANCGNTKSIDELRREMKAEGIPPTN 573
Query: 332 AIFEAKVAALCKVSRVDEAIKVIEE-----------DMVAVNCLPNSEVYNILLKNLRNV 380
+ LC+ + + V+ E DM + P+ YN +++ L V
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633
Query: 381 GNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADS 440
+ + L M K A TY IL++ LC +A + + ++ +
Sbjct: 634 KHLSGAFVFLEIM-KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 692
Query: 441 YNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMM 489
Y +LIK C G AV ++ +G I + ++ + C +M
Sbjct: 693 YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLM 741
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 207/508 (40%), Gaps = 47/508 (9%)
Query: 30 IFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSC-----ECKDTVFA 84
F E + Y + H+ + +L R E++ ++EQ+ Q+ E V+
Sbjct: 70 FFKELRDIYA-FRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWD 128
Query: 85 SAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRL-----------EA 133
+ + + +VD+++ + K + N TQS+N++L D++ E
Sbjct: 129 MLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH 188
Query: 134 AHGLFVDNSC---------------GW-EVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
+ VD C W ++ V + N +M C G D+A F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
G P+ S+ IL+ GLC G + EA L M ++ G D V Y L
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDM----NKHGVEPDSVTYNILAKGFHL 304
Query: 238 DGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG-SVPSL 296
G A E++ +L KGL Y L QC G +I+ L+ + L +G + S+
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG-NIDMGLVLLKDMLSRGFELNSI 363
Query: 297 SSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
+ M L +IDEA + +M+ G P + + LCK+ + D A+ + +E
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 357 DMVAVNCLPNSEVYNILLKNLRNVG---NSAAVLESLNKMSKKVGCTADRETYIILLEML 413
M LPNS + LL L G + ++L+SL G T D Y I+++
Sbjct: 424 -MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL----ISSGETLDIVLYNIVIDGY 478
Query: 414 CRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEI 473
+ EA +L + + P ++NSLI G C EA L+ + G P +
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 474 SVWKSLASLFCNLEMMKASSEIFNRLRS 501
+ +L + N K+ E+ +++
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKA 566
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 185/418 (44%), Gaps = 13/418 (3%)
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN 141
VF+ + YA AG+++++I +F+ I Q+ LL +V + + +F
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIF-KK 193
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
V + +H N+L++A G + A ++ EM+ +G +P+ +Y L+ C
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
EA S+ R+ + G +IV Y + + +G+ EA + +I + + A
Sbjct: 254 HFEAL----SVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHV 308
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
Y L C DI+ RL +G P + +YN++ L + +I EA++++ E
Sbjct: 309 TYTTLIDGYCR-MNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
M + +P + A CK+ + A+KV ++ M+ + Y L+ V
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAVKV-KKKMIESGLKLDMYSYKALIHGFCKVL 426
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADS- 440
E L M +K G + TY L++ + + E ++LLE+ + CAD
Sbjct: 427 ELENAKEELFSMIEK-GFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL--CADVA 483
Query: 441 -YNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFN 497
Y LI+ +C L + A + E M +G + + ++ ++A + + +S +F+
Sbjct: 484 LYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFD 541
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 150/334 (44%), Gaps = 16/334 (4%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N VY ++ SG + ++ +M + + + I++Y + EA+++
Sbjct: 202 NIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ 261
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNL----LMY 159
+ + ++N+ + E R+ A LF E+K V A ++ L+
Sbjct: 262 DRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR------EIKDDVTANHVTYTTLID 315
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
C D AL++ + M+ +G P +Y +++ LC DGR+ EA LL M S K
Sbjct: 316 GYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM----SGK 371
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
D + TL++A C+ A+++ K++ GLK Y L C ++E
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCK-VLELEN 430
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
K + + KG P ++Y+ + Y+++K DE K++ E + RG A++ +
Sbjct: 431 AKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIR 490
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNIL 373
+CK+ +VD A KV+ E M + +S ++ +
Sbjct: 491 RICKLEQVDYA-KVLFESMEKKGLVGDSVIFTTM 523
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 46/348 (13%)
Query: 152 HALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYS 211
H + LM G + ++ +F+++ G P+ + +L+ L T ++
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK----QRLTDTVWK 189
Query: 212 MFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQC 271
+F ++ + G +I VY L+ A + G E+A ++LS++ KG+ YN L C
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 272 SDGRDIEGTKRLIHEALIK-GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
E + + + + G P++ +YN+ E ++ EA ++ E++D
Sbjct: 250 KKSMHFEALS--VQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTAN 306
Query: 331 RAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESL 390
+ + C+++ +DEA+++ E V+ES
Sbjct: 307 HVTYTTLIDGYCRMNDIDEALRLRE------------------------------VMESR 336
Query: 391 NKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCS 450
G + TY +L LC + R EA++LL +MS K P + N+LI C
Sbjct: 337 -------GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCK 389
Query: 451 LGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCN-LEMMKASSEIFN 497
+ AV + MI G ++ +K+L FC LE+ A E+F+
Sbjct: 390 IEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFS 437
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 123/278 (44%), Gaps = 5/278 (1%)
Query: 223 EDIV-VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
ED+ V+ L+ + G ++I + +I GLK + L L+ R +
Sbjct: 130 EDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVL-LNSLVKQRLTDTVW 188
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
++ + + G V ++ YN + ++A+K++ EM+++G P + ++
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
CK S EA+ V ++ M PN YN + G ++ V TA
Sbjct: 249 CKKSMHFEALSV-QDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDV--TA 305
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
+ TY L++ CR EA +L E M + + P +YNS+++ LC GR EA L
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Query: 462 EDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+M + P+ +L + +C +E M ++ ++ ++
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM 403
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 189/456 (41%), Gaps = 11/456 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
V A +IS+LG GR+ ++ +++D + S I+ +AN+G EA+ +FK +
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ C ++N +L + V+ + + N L+ C +G
Sbjct: 235 EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGS 293
Query: 167 -SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
A Q+F+EM G ++ +Y L+ R EA +L M G I
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVL----NGFSPSI 349
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
V Y +L+ A DG +EA+E+ +++ KG K Y L LS +E +
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL-LSGFERAGKVESAMSIFE 408
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
E G P++ ++NA + K E K+ E+ G P + +A + +
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ-N 467
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
+D + + ++M +P E +N L+ G+ + +M G T D T
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM-LDAGVTPDLST 526
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
Y +L L R + ++ ++L +M P +Y SL+ + G++ + L + +
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN-GKEIGLMHSLAEEV 585
Query: 466 SQGKL-PEISVWKSLASLFCNLEMMKASSEIFNRLR 500
G + P + K+L + +++ + F+ L+
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK 621
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 199/482 (41%), Gaps = 57/482 (11%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
+A +F E K+ ++++ Y ++ + G S R E V+ +M + + S
Sbjct: 297 EAAQVFEEMKA--AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 86 AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGW 145
I+ YA G++DEA+ L + + ++ TLL G+
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS--------------------GF 394
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
E +V + A+ IF+EM GC PN ++ +K + G+ E
Sbjct: 395 ERAGKVES----------------AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE- 437
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR 265
+ +F I+ G DIV + TLL ++G E + ++ R G + +N
Sbjct: 438 ---MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 266 LDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDR 325
L +S S E + L G P LS+YN + L ++++KV+ EM+D
Sbjct: 495 L-ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 553
Query: 326 GFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAA 385
KP + + + A + + EE V E +LLK L V +
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV-----IEPRAVLLKTLVLVCSKCD 608
Query: 386 VLESLNKMS---KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYN 442
+L + K+ G + D T ++ + R + +A+ +L+ M + + P +YN
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 443 SLI---KGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
SL+ G+ E L +++++G P+I + ++ +C M+ +S IF+ +
Sbjct: 669 SLMYMHSRSADFGKSEEI---LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 500 RS 501
R+
Sbjct: 726 RN 727
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/481 (21%), Positives = 203/481 (42%), Gaps = 14/481 (2%)
Query: 24 PMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVF 83
P +A+ + NE ++ + Y ++IS G L E ++ QM + + +
Sbjct: 330 PKEAMKVLNEMVLN--GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 84 ASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NS 142
+ ++ + AG V+ A+++F+ + C +FN +++ + + +F + N
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 143 CGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRL 202
CG + + N L+ G +F+EM G P R+++ L+ G
Sbjct: 448 CG--LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 203 HEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC 262
+A +++ R+ G D+ Y T+L AL G +E++ ++L+++ K +
Sbjct: 506 EQAM----TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 263 YNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKI-DEADKVIVE 321
Y L L ++G++I G + E + G + + V + S+ + EA++ E
Sbjct: 562 YCSL-LHAYANGKEI-GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
+++RGF P + V+ + V +A V++ M P+ YN L+
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY-MKERGFTPSMATYNSLMYMHSRSA 678
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
+ E L ++ K G D +Y ++ CR R +AS++ +M P +Y
Sbjct: 679 DFGKSEEILREILAK-GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITY 737
Query: 442 NSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
N+ I + EA+ + MI G P + + S+ +C L + LR+
Sbjct: 738 NTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
Query: 502 L 502
L
Sbjct: 798 L 798
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 7/207 (3%)
Query: 298 SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEED 357
SY ++ + + EA V +M++ G KPT + + K+ I + E
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 358 MVAVNCLPNSEVYNILLKNLRNVG---NSAAVLESLNKMSKKVGCTADRETYIILLEMLC 414
M + P++ YN L+ + +A V E + K G + D+ TY LL++
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM----KAAGFSYDKVTYNALLDVYG 325
Query: 415 RERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEIS 474
+ R EA ++L +M + + P +YNSLI G EA+ M +G P++
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 475 VWKSLASLFCNLEMMKASSEIFNRLRS 501
+ +L S F ++++ IF +R+
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRN 412
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 175/402 (43%), Gaps = 24/402 (5%)
Query: 49 ATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYA------NAGLVDEAITL 102
+I+ L S R+ E +V EQMR + + + A +I+ G + EA L
Sbjct: 333 GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 392
Query: 103 FKNIP-QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYAL 161
+ + CV ++N L+ +LE A + V E+K V +N ++ +
Sbjct: 393 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV-VSRMKEDEIKPNVVTVNTIVGGM 451
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW--RISQK 219
C ++A+ F +M+ +G N +Y L+ C + +A M+W ++ +
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA------MYWYEKMLEA 505
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
G D +Y L+ LC+ + +AI ++ K+ G YN L C D + E
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC-DKNNAEK 564
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
++ + +G P +YN + + ++++ +M++ G PT + A +
Sbjct: 565 VYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
A C V +DEA+K+ ++ + PN+ +YNIL+ +GN L +M K+
Sbjct: 625 AYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM-V 683
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQM------SIKSYW 435
+ ETY L + L + + +L+++M I+S W
Sbjct: 684 RPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVNQIRSQW 725
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 162/355 (45%), Gaps = 25/355 (7%)
Query: 146 EVKSR--VHALNLLMYALCGKGRSDLALQIFQEMDYQ----GCYPNRDS--YAILMKGLC 197
EVK R V L +L+ LC R D AL++F++M + G DS + L+ GLC
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 198 HDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
GRL EA LL M N V Y L+D C GK E A E++S++ +K
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNA---VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 258 APKRCYNRLDLSQC-SDGRDIEGTKRL-IHEALIKGSVPSLSSYNAMAVDLYSESKIDEA 315
N + C G ++ + + + +KG+V +Y + S S +++A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV---VTYMTLIHACCSVSNVEKA 495
Query: 316 DKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE---EDMVAVNCLPNSEVYNI 372
+M + G P I+ A ++ LC+V R +AI+V+E E +++ L YN+
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL----AYNM 551
Query: 373 LLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK 432
L+ + N+ V E L M K+ G D TY L+ + + + +++EQM
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKE-GKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 433 SYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL-PEISVWKSLASLFCNL 486
P +Y ++I CS+G EA+ +DM K+ P ++ L + F L
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 132/319 (41%), Gaps = 43/319 (13%)
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN--GED 224
+DL L+ MD P+ + IL+ LC R+ EA + M + + GN D
Sbjct: 314 NDLVLK----MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKAD 369
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
+ + TL+D LC+ G+ +EA E+L + +K +RC
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVR-----MKLEERC---------------------- 402
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
VP+ +YN + K++ A +V+ M++ KP V +C+
Sbjct: 403 --------VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
++ A+ V DM N Y L+ +V N + KM + GC+ D +
Sbjct: 455 HGLNMAV-VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE-AGCSPDAK 512
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
Y L+ LC+ RR +A +++E++ + +YN LI C + L DM
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 465 ISQGKLPEISVWKSLASLF 483
+GK P+ + +L S F
Sbjct: 573 EKEGKKPDSITYNTLISFF 591
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 145/342 (42%), Gaps = 16/342 (4%)
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCY--PNRDSYAILMKGLCHDGRLHEATHLLYSM 212
N+++ L G D A ++ EM + PNR + I++ + + L E + ++
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEK--IIAL 246
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKG--LKAPKRCYNRLDLSQ 270
R S G + V + +LC++ + A +ILS +++ L+AP +N L LS
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPP--FNAL-LSC 303
Query: 271 CSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ----DRG 326
DI L+ + P + + + L ++DEA +V +M+ D G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 327 --FKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSA 384
K F + LCKV R+ EA +++ + C+PN+ YN L+ G
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 385 AVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSL 444
E +++M K+ + T ++ +CR A M + +Y +L
Sbjct: 424 TAKEVVSRM-KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 445 IKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNL 486
I CS+ +A+ W E M+ G P+ ++ +L S C +
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 166/355 (46%), Gaps = 25/355 (7%)
Query: 146 EVKSR--VHALNLLMYALCGKGRSDLALQIFQEMDYQ----GCYPNRDS--YAILMKGLC 197
EVK R V L +L+ LC R D AL++F++M + G DS + L+ GLC
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 198 HDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
GRL EA LL M ++ ++ + V Y L+D C GK E A E++S++ +K
Sbjct: 382 KVGRLKEAEELLVRM--KLEERC-APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 258 APKRCYNRLDLSQC-SDGRDIEGTKRL-IHEALIKGSVPSLSSYNAMAVDLYSESKIDEA 315
N + C G ++ + + + +KG+V +Y + S S +++A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV---VTYMTLIHACCSVSNVEKA 495
Query: 316 DKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE---EDMVAVNCLPNSEVYNI 372
+M + G P I+ A ++ LC+V R +AI+V+E E +++ L YN+
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL----AYNM 551
Query: 373 LLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK 432
L+ + N+ V E L M K+ G D TY L+ + + + +++EQM
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKE-GKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 433 SYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL-PEISVWKSLASLFCNL 486
P +Y ++I CS+G EA+ +DM K+ P ++ L + F L
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 184/439 (41%), Gaps = 53/439 (12%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPV-------YATMISILGTS 58
P V+T L + + +AL +F + + K T +G V + T+I L
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEKMRG---KRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 59 GRLGEMRDVIEQMR-QDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQS 117
GRL E +++ +M+ ++ C + I+ Y AG ++ A + + + +
Sbjct: 384 GRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVT 443
Query: 118 FNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
NT++ M L A F+D VK V L++A C + A+ +++M
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDME-KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
GC P+ Y L+ GLC R H+A ++ ++ + G D++ Y L+ C+
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE----KLKEGGFSLDLLAYNMLIGLFCD 558
Query: 238 DGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLS 297
E+ E+L+ + ++G K YN L +S +D E +R++ +
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTL-ISFFGKHKDFESVERMMEQ----------- 606
Query: 298 SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEED 357
M++ G PT + A + A C V +DEA+K+ ++
Sbjct: 607 ------------------------MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 358 MVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRER 417
+ PN+ +YNIL+ +GN L +M K+ + ETY L + L +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM-VRPNVETYNALFKCLNEKT 701
Query: 418 RYLEASQLLEQMSIKSYWP 436
+ +L+++M +S P
Sbjct: 702 QGETLLKLMDEMVEQSCEP 720
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 131/319 (41%), Gaps = 43/319 (13%)
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN--GED 224
+DL L+ MD P+ + IL+ LC R+ EA + M + + GN D
Sbjct: 314 NDLVLK----MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKAD 369
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
+ + TL+D LC+ G+ +EA E+L + +K +RC
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVR-----MKLEERC---------------------- 402
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
P+ +YN + K++ A +V+ M++ KP V +C+
Sbjct: 403 --------APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
++ A+ V DM N Y L+ +V N + KM + GC+ D +
Sbjct: 455 HGLNMAV-VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE-AGCSPDAK 512
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
Y L+ LC+ RR +A +++E++ + +YN LI C + L DM
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM 572
Query: 465 ISQGKLPEISVWKSLASLF 483
+GK P+ + +L S F
Sbjct: 573 EKEGKKPDSITYNTLISFF 591
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 145/342 (42%), Gaps = 16/342 (4%)
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCY--PNRDSYAILMKGLCHDGRLHEATHLLYSM 212
N+++ L G D A ++ EM + PNR + I++ + GRL ++ ++
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWK-GRLLTEEKII-AL 246
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKG--LKAPKRCYNRLDLSQ 270
R S G + V + +LC++ + A +ILS +++ L+AP +N L LS
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPP--FNAL-LSC 303
Query: 271 CSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ----DRG 326
DI L+ + P + + + L ++DEA +V +M+ D G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 327 --FKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSA 384
K F + LCKV R+ EA +++ + C PN+ YN L+ G
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 385 AVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSL 444
E +++M K+ + T ++ +CR A M + +Y +L
Sbjct: 424 TAKEVVSRM-KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 445 IKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNL 486
I CS+ +A+ W E M+ G P+ ++ +L S C +
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y T+IS G + ++EQMR+D + T + + I+ Y + G +DEA+ LFK++
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 108 QFNCVNW-TQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ VN T +N L+ A L + V+ V N L L K +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM-VRPNVETYNALFKCLNEKTQ 702
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRL 202
+ L++ EM Q C PN+ + ILM+ L L
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 174/395 (44%), Gaps = 18/395 (4%)
Query: 51 MISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYA------NAGLVDEAITLFK 104
+I+ L S R+ E +V EQMR + + + A +I+ G + EA L
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 105 NIP-QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCG 163
+ + CV ++N L+ +LE A + V E+K V +N ++ +C
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV-VSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW--RISQKGN 221
++A+ F +M+ +G N +Y L+ C + +A M+W ++ + G
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA------MYWYEKMLEAGC 507
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
D +Y L+ LC+ + +AI ++ K+ G YN L C D + E
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC-DKNNAEKVY 566
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
++ + +G P +YN + + ++++ +M++ G PT + A + A
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
C V +DEA+K+ ++ + PN+ +YNIL+ +GN L +M K+
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM-VRP 685
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWP 436
+ ETY L + L + + +L+++M +S P
Sbjct: 686 NVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEP 720
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 162/355 (45%), Gaps = 25/355 (7%)
Query: 146 EVKSR--VHALNLLMYALCGKGRSDLALQIFQEMDYQ----GCYPNRDS--YAILMKGLC 197
EVK R V L +L+ LC R D AL++F++M + G DS + L+ GLC
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 198 HDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
GRL EA LL M N V Y L+D C GK E A E++S++ +K
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNA---VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 258 APKRCYNRLDLSQC-SDGRDIEGTKRL-IHEALIKGSVPSLSSYNAMAVDLYSESKIDEA 315
N + C G ++ + + + +KG+V +Y + S S +++A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV---VTYMTLIHACCSVSNVEKA 495
Query: 316 DKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE---EDMVAVNCLPNSEVYNI 372
+M + G P I+ A ++ LC+V R +AI+V+E E +++ L YN+
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL----AYNM 551
Query: 373 LLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK 432
L+ + N+ V E L M K+ G D TY L+ + + + +++EQM
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKE-GKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 433 SYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL-PEISVWKSLASLFCNL 486
P +Y ++I CS+G EA+ +DM K+ P ++ L + F L
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 174/416 (41%), Gaps = 54/416 (12%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPV-------YATMISILGTS 58
P V+T L + + +AL +F + + K T +G V + T+I L
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRG---KRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 59 GRLGEMRDVIEQMR-QDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQS 117
GRL E +++ +M+ ++ C + I+ Y AG ++ A + + + +
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVT 443
Query: 118 FNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
NT++ M L A F+D VK V L++A C + A+ +++M
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDME-KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
GC P+ Y L+ GLC R H+A ++ ++ + G D++ Y L+ C+
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE----KLKEGGFSLDLLAYNMLIGLFCD 558
Query: 238 DGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLS 297
E+ E+L+ + ++G K YN L +S +D E +R++ + G P+++
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTL-ISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 298 SYNAMAVDLY-SESKIDEADKVIVEMQ-DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
+Y A+ +D Y S ++DEA K+ +M P I+ + A K+ +A+ + E
Sbjct: 618 TYGAV-IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 356 E----------------------------------DMVAVNCLPNSEVYNILLKNL 377
E +MV +C PN IL++ L
Sbjct: 677 EMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 132/319 (41%), Gaps = 43/319 (13%)
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN--GED 224
+DL L+ MD P+ + IL+ LC R+ EA + M + + GN D
Sbjct: 314 NDLVLK----MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKAD 369
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
+ + TL+D LC+ G+ +EA E+L + +K +RC
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVR-----MKLEERC---------------------- 402
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
VP+ +YN + K++ A +V+ M++ KP V +C+
Sbjct: 403 --------VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
++ A+ V DM N Y L+ +V N + KM + GC+ D +
Sbjct: 455 HGLNMAV-VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE-AGCSPDAK 512
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDM 464
Y L+ LC+ RR +A +++E++ + +YN LI C + L DM
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 465 ISQGKLPEISVWKSLASLF 483
+GK P+ + +L S F
Sbjct: 573 EKEGKKPDSITYNTLISFF 591
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 145/342 (42%), Gaps = 16/342 (4%)
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCY--PNRDSYAILMKGLCHDGRLHEATHLLYSM 212
N+++ L G D A ++ EM + PNR + I++ + + L E + ++
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEK--IIAL 246
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKG--LKAPKRCYNRLDLSQ 270
R S G + V + +LC++ + A +ILS +++ L+AP +N L LS
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPP--FNAL-LSC 303
Query: 271 CSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ----DRG 326
DI L+ + P + + + L ++DEA +V +M+ D G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 327 --FKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSA 384
K F + LCKV R+ EA +++ + C+PN+ YN L+ G
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 385 AVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSL 444
E +++M K+ + T ++ +CR A M + +Y +L
Sbjct: 424 TAKEVVSRM-KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 445 IKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNL 486
I CS+ +A+ W E M+ G P+ ++ +L S C +
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y T+IS G + ++EQMR+D + T + + I+ Y + G +DEA+ LFK++
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 108 QFNCVNW-TQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ VN T +N L+ A L + V+ V N L L K +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM-VRPNVETYNALFKCLNEKTQ 702
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRL 202
+ L++ EM Q C PN+ + ILM+ L L
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 195/461 (42%), Gaps = 57/461 (12%)
Query: 7 RVLTPTYLSQIIRTQ--KNPMKALH---IFNEAKSRYPKYTHNGPVYATMISILGTSGRL 61
+ LTP L +R++ +P+ A + +FN A + + H+ + M L + R
Sbjct: 71 QTLTPQTLLGFLRSKIRNHPLYAHYDFAVFNWAAT-LDTFRHDHDSFLWMSRSLAATHRF 129
Query: 62 GEMRDVIEQMRQDSCECK---------DTVFASAINIYANAGLVDEAITLFKNIPQFNCV 112
++ ++ + + C C + +F SAI+ Y A +D A+
Sbjct: 130 DDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALL----------- 178
Query: 113 NWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQ 172
+F+T+ +++ + K V N ++ G D AL+
Sbjct: 179 ----AFDTMKRLI--------------------DGKPNVGVYNTVVNGYVKSGDMDKALR 214
Query: 173 IFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLL 232
+Q M + P+ ++ IL+ G C + L +F + +KG ++V + TL+
Sbjct: 215 FYQRMGKERAKPDVCTFNILINGYCRSSKFD----LALDLFREMKEKGCEPNVVSFNTLI 270
Query: 233 DALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGS 292
GK EE +++ +++ G + + L C +GR ++ L+ + L K
Sbjct: 271 RGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR-VDDACGLVLDLLNKRV 329
Query: 293 VPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIK 352
+PS Y ++ L E+K A +++ E+ +G P V L K R ++A
Sbjct: 330 LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 353 VIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEM 412
+E+ M+ LP+S +N+LL++L + +S L ++ G D TY +L+
Sbjct: 390 FMEK-MMNAGILPDSVTFNLLLRDLCSSDHSTDA-NRLRLLASSKGYEPDETTYHVLVSG 447
Query: 413 LCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGR 453
+E R E L+ +M K P +YN L+ GL G+
Sbjct: 448 FTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 133/344 (38%), Gaps = 82/344 (23%)
Query: 160 ALCGKGRSDLALQIFQEMD-YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQ 218
A C + D AL F M PN Y ++ G G + +A + R+ +
Sbjct: 166 AYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRF----YQRMGK 221
Query: 219 KGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
+ D+ + L++ C KF+ A+++ ++ KG +
Sbjct: 222 ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCE--------------------- 260
Query: 279 GTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKV 338
P++ S+N + S KI+E K+ EM + G + + A E V
Sbjct: 261 ---------------PNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILV 305
Query: 339 AALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVG 398
LC+ RVD+A ++ L+ ++K+V
Sbjct: 306 DGLCREGRVDDACGLV-----------------------------------LDLLNKRV- 329
Query: 399 CTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAV 458
Y L+E LC E + + A +++E++ K PC + +L++GL GR +A
Sbjct: 330 -LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKAS 388
Query: 459 MWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRSL 502
++E M++ G LP+ + L C+ + S NRLR L
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLCSSD----HSTDANRLRLL 428
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 176/414 (42%), Gaps = 26/414 (6%)
Query: 47 VYATMISILG--TSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFK 104
VY+ I + G G + + + +I++ + + + + IN Y + K
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 105 NIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGK 164
+ + V ++ L+++ V ++ A LF D ++S VH L+ C K
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLF-DEMRERGIESDVHVYTSLISWNCRK 342
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
G A +F E+ +G P+ +Y L+ G+C G + A L+ M KG
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM----QSKGVNIT 398
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAP-------KRCYNRLDLSQCSDGRDI 277
VV+ TL+D C G +EA I + +KG +A C+NRL +
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL--------KRY 450
Query: 278 EGTKRLIHEALIKGSVPSLSSYNAMAVDLY-SESKIDEADKVIVEMQDRGFKPTRAIFEA 336
+ K+ + + G S SY + +D+Y E ++EA ++ VEM +G +P +
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNL-IDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
+ A CK ++ EA K + +M A P+S Y L+ N + ++M K
Sbjct: 510 MIYAYCKQGKIKEARK-LRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK 568
Query: 397 VGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCS 450
G + TY +++ L + + EA L ++M K Y Y +LI + S
Sbjct: 569 -GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 152/353 (43%), Gaps = 7/353 (1%)
Query: 147 VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEAT 206
VK V++L +++ LC +G + + ++ +E +G P +Y ++
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 207 HLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL 266
+L M + G + V Y L++ ++GK +A ++ ++ +G+++ Y L
Sbjct: 280 GVLKVM----KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 267 DLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRG 326
C G +++ L E KG PS +Y A+ + ++ A+ ++ EMQ +G
Sbjct: 336 ISWNCRKG-NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG 394
Query: 327 FKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAV 386
T+ +F + C+ VDEA +I + M + N + +
Sbjct: 395 VNITQVVFNTLIDGYCRKGMVDEA-SMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Query: 387 LESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIK 446
+ L +M + G +Y L+++ C+E EA +L +MS K P A +YN +I
Sbjct: 454 KQWLFRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIY 512
Query: 447 GLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
C G+ EA +M + G P+ + SL C + + + +F+ +
Sbjct: 513 AYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM 565
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 128/276 (46%), Gaps = 15/276 (5%)
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR-CYNRLDLSQCSDGRDIEGTKRLI 284
+V+R +D +G FEE + + +++KGL +R C + L R I+ +
Sbjct: 159 LVFRVYVD----NGMFEEGLRVFDYMVKKGLSIDERSCI--VFLVAAKKRRRIDLCLEIF 212
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCK- 343
+ G ++ S + L +++++ K+I E +G KP + + A K
Sbjct: 213 RRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ 272
Query: 344 --VSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
S V+ +KV+++D V N + + + + +KN G + + ++M ++ G +
Sbjct: 273 RDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKN----GKMSDAEKLFDEMRER-GIES 327
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
D Y L+ CR+ A L ++++ K P + +Y +LI G+C +G A + +
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 462 EDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFN 497
+M S+G V+ +L +C M+ +S I++
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 149/348 (42%), Gaps = 9/348 (2%)
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
+L+ G + L++F M +G + S + + R+ L +F
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRID----LCLEIFR 213
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
R+ G + +++ LC G+ E++ +++ + KG+K YN + ++
Sbjct: 214 RMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTI-INAYVKQ 272
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
RD G + ++ G V + +Y + K+ +A+K+ EM++RG + ++
Sbjct: 273 RDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVY 332
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
+ ++ C+ + A + +E + P+S Y L+ + VG A +N+M
Sbjct: 333 TSLISWNCRKGNMKRAFLLFDE-LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
K G + + L++ CR+ EAS + + M K + + N++ L R
Sbjct: 392 SK-GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 455 YEAVMWLEDMISQG-KLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
EA WL M+ G KL +S + +L ++C ++ + +F + S
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVS-YTNLIDVYCKEGNVEEAKRLFVEMSS 497
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 42/317 (13%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+ N VY + L + + + +++E+ + K+ A IN+Y G+ + A
Sbjct: 67 FRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQ 126
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
+F +P+ NC SFN LL V+ + + G+F + ++ V + N L+
Sbjct: 127 KVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKG 186
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW-RISQK 219
LCGKG A+ + E++ +G P+ ++ IL+ G+ E + W R+ +K
Sbjct: 187 LCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI-----WARMVEK 241
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
DI Y L L + K EE + + K+ LK
Sbjct: 242 NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELK---------------------- 279
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
P + ++ AM SE K+DEA E++ G +P + +F + +
Sbjct: 280 --------------PDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLP 325
Query: 340 ALCKVSRVDEAIKVIEE 356
A+CK ++ A ++ +E
Sbjct: 326 AICKAGDLESAYELCKE 342
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 201/496 (40%), Gaps = 75/496 (15%)
Query: 67 VIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
+ ++M ++ F+ I + G +++A+ +K + +T++Q +
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 127 SEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNR 186
+ E A LF D S + + V N ++ LC +G++D A ++ +M+ +G PN
Sbjct: 421 KGQKHEEALKLF-DESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIE 246
SY +M G C + L +F I +KG + Y L+D + + A+E
Sbjct: 479 VSYNNVMLGHCRQKNMD----LARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
+++ + ++ Y + C G+ + + L + K S SYN++
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 307 YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE--------DM 358
+ E ++D A EM G P + + + LCK +R+D+A+++ +E D+
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654
Query: 359 VAVNCL--------------------------PNSEVYNILLKNLRNVGNSAAVLESLNK 392
A L P+ +YN L+ RN+GN A L+ K
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 393 MSKK----------------------------------VGCTADRETYIILLEMLCRERR 418
M K VG D Y +++ L ++ +
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 419 YLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKS 478
+++ ++ E+M + P YN++I G G EA ++M+ +G LP+ + +
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834
Query: 479 LAS-LFCNLEMMKASS 493
L S NL+ ++A+S
Sbjct: 835 LVSGQVGNLQPVRAAS 850
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 152/339 (44%), Gaps = 15/339 (4%)
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
G + AL+ +++M+ G P+ +++G + EA L F + +
Sbjct: 388 GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF-----ETGLAN 442
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
+ V T+L LC+ GK +EA E+LSK+ +G+ YN + L C ++++ + +
Sbjct: 443 VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ-KNMDLARIVF 501
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
L KG P+ +Y+ + + A +V+ M + +++ + LCKV
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKV 561
Query: 345 SRVDEA----IKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
+ +A +IEE + V+C+ YN ++ G + + + +M G +
Sbjct: 562 GQTSKARELLANMIEEKRLCVSCMS----YNSIIDGFFKEGEMDSAVAAYEEMCGN-GIS 616
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
+ TY L+ LC+ R +A ++ ++M K +Y +LI G C A
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL 676
Query: 461 LEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
+++ +G P ++ SL S F NL M A+ +++ ++
Sbjct: 677 FSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 167/389 (42%), Gaps = 8/389 (2%)
Query: 111 CVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLA 170
CV +++ +++ V + ++ A L D + V A L+ C A
Sbjct: 300 CVPSQETYTSVILASVKQGNMDDAIRL-KDEMLSDGISMNVVAATSLITGHCKNNDLVSA 358
Query: 171 LQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRT 230
L +F +M+ +G PN ++++L++ +G + +A + ++ G + T
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEF----YKKMEVLGLTPSVFHVHT 414
Query: 231 LLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIK 290
++ + K EEA+++ + GL C L C G+ E T+ L+ + +
Sbjct: 415 IIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSW-LCKQGKTDEATE-LLSKMESR 472
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
G P++ SYN + + + +D A V + ++G KP + + + A
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 351 IKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILL 410
++V+ M + N N VY ++ L VG ++ E L M ++ +Y ++
Sbjct: 533 LEVVNH-MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSII 591
Query: 411 EMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL 470
+ +E A E+M P +Y SL+ GLC R +A+ ++M ++G
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Query: 471 PEISVWKSLASLFCNLEMMKASSEIFNRL 499
+I + +L FC M+++S +F+ L
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSEL 680
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 153/347 (44%), Gaps = 11/347 (3%)
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
++ A +G D A+++ EM G N + L+ G C + L A L F ++
Sbjct: 310 VILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL----FDKM 365
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
++G + V + L++ ++G+ E+A+E K+ GL P + + G+
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL-TPSVFHVHTIIQGWLKGQK 424
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
E +L E+ G + ++ N + L + K DEA +++ +M+ RG P +
Sbjct: 425 HEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
+ C+ +D A +++ +++ PN+ Y+IL+ + LE +N M+
Sbjct: 484 VMLGHCRQKNMDLA-RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSS 542
Query: 397 VGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCAD--SYNSLIKGLCSLGRQ 454
+ Y ++ LC+ + +A +LL M I+ C SYNS+I G G
Sbjct: 543 -NIEVNGVVYQTIINGLCKVGQTSKARELLANM-IEEKRLCVSCMSYNSIIDGFFKEGEM 600
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
AV E+M G P + + SL + C M + E+ + +++
Sbjct: 601 DSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 156/362 (43%), Gaps = 17/362 (4%)
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
S G+EV SR A N L+ A ++D A+ I +M P + L
Sbjct: 156 SFGFEVNSR--AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNS 213
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
L EA L YS I G D V + L+ A + K EA+E+LS+ + +G +
Sbjct: 214 LTEAKEL-YSRMVAIGVDG---DNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSL 269
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKG-SVPSLSSYNAMAVDLYSESKIDEADKVIV 320
Y+ L + C D+ L+ E K VPS +Y ++ + + +D+A ++
Sbjct: 270 LYS-LAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 321 EMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNV 380
EM G + + CK + + A+ V+ + M PNS +++L++ R
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSAL-VLFDKMEKEGPSPNSVTFSVLIEWFRKN 387
Query: 381 GNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLE---QMSIKSYWPC 437
G LE KM + +G T +++ + +++ EA +L + + + + + C
Sbjct: 388 GEMEKALEFYKKM-EVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC 446
Query: 438 ADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFN 497
N+++ LC G+ EA L M S+G P + + ++ C + M + +F+
Sbjct: 447 ----NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502
Query: 498 RL 499
+
Sbjct: 503 NI 504
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 198/475 (41%), Gaps = 43/475 (9%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
YT + + +++S + G++ D++ M + CE + S I+ + G + A
Sbjct: 52 YTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS 111
Query: 101 TLFKNIPQ---FNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLL 157
+ +++ F C SFN+L +++ +FV V + + N++
Sbjct: 112 LVLESLRASHGFICKPDIVSFNSLFN---GFSKMKMLDEVFV----YMGVMLKCCSPNVV 164
Query: 158 MYA-----LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
Y+ C G LAL+ F M PN ++ L+ G C G L A L Y
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL-YKE 223
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS 272
R+ N +V Y L+D C+ G+ + A E+ S+++ ++ Y +
Sbjct: 224 MRRVRMSLN---VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 273 DGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRA 332
G D + + + + L +G +++Y + L K+ EA +++ +M+ P
Sbjct: 281 RG-DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 333 IFEAKVAALCKVSRVDEAIKV--------IEEDMVAVNCLPNSEVYNILLKNLRNVGNSA 384
IF + A K R+ A+ + E D+VA++ + + N L + A
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL-------HEA 392
Query: 385 AVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSL 444
V + K A+ Y +L++ LC+E ++E +L ++S P Y S
Sbjct: 393 IVYFCIEK--------ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW 444
Query: 445 IKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
I GLC G +A M+ +G L ++ + +L + +M + ++F+ +
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEM 499
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 172/399 (43%), Gaps = 59/399 (14%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N Y+T I SG L M++D+ F I+ Y AG ++ A++L+
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY---- 159
K + + ++ L+ + ++ A ++ V+ RV N L+Y
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY-----SRMVEDRVEP-NSLVYTTII 275
Query: 160 -ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQ 218
+G SD A++ +M QG + +Y +++ GLC +G+L EAT ++ M +
Sbjct: 276 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM----EK 331
Query: 219 KGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
D+V++ T+++A + G+ + A+ + K++ +G + + + LS DG
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP-----DVVALSTMIDGIAKN 386
Query: 279 GTKRLIHEALIKGSVPSLSS--YNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
G +HEA++ + + Y + L E E +++ ++ + G P + ++ +
Sbjct: 387 GQ---LHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTS 443
Query: 337 KVAALCKVSRVDEAIKV----IEE----DMVAVNCL------------------------ 364
+A LCK + +A K+ ++E D++A L
Sbjct: 444 WIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSG 503
Query: 365 --PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
P+S V+++L++ GN AA + L M ++ TA
Sbjct: 504 ISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTA 542
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 131/329 (39%), Gaps = 44/329 (13%)
Query: 169 LALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVY 228
L+L+ + +G P+R S+ ++ +C G++ A +++SM + G D++ Y
Sbjct: 39 LSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSM----PRFGCEPDVISY 94
Query: 229 RTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
+L+D C +G A +L + R H +
Sbjct: 95 NSLIDGHCRNGDIRSASLVLESL------------------------------RASHGFI 124
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM--QDRGFKPTRAIFEAKVAALCKVSR 346
K P + S+N++ SK+ D+V V M + P + + CK
Sbjct: 125 CK---PDIVSFNSL---FNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGE 178
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETY 406
+ A+K M PN + L+ G+ V SL K ++V + + TY
Sbjct: 179 LQLALKSFHS-MKRDALSPNVVTFTCLIDGYCKAGD-LEVAVSLYKEMRRVRMSLNVVTY 236
Query: 407 IILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMIS 466
L++ C++ A ++ +M P + Y ++I G G A+ +L M++
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 467 QGKLPEISVWKSLASLFCNLEMMKASSEI 495
QG +I+ + + S C +K ++EI
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEI 325
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 199/467 (42%), Gaps = 55/467 (11%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N + +++ L GR+ E++ +++ M + S I+++ G + A+
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWA 527
Query: 104 KNIPQFNCVNW-TQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
+ + Q + W S+N L+ M+ ++ A G ++ + N++M +
Sbjct: 528 EEM-QERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKG--IEPDIATFNIMMNSQR 584
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLL------------- 209
+G S+ L+++ +M G P+ S I++ LC +G++ EA H+L
Sbjct: 585 KQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLT 644
Query: 210 -YSMFWRISQKGNGEDIV-----------------VYRTLLDALCEDGKFEEAIEILSKI 251
Y +F S K D + VY TL+ LC+ G ++A ++ +
Sbjct: 645 TYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 704
Query: 252 LRKGLKAPKRCYNRL--DLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSE 309
+G +N L S R T ++ EA G P++++YN + L
Sbjct: 705 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA---GISPNVATYNTIIRGLSDA 761
Query: 310 SKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEV 369
I E DK + EM+ RG +P + A ++ K+ + ++ + E M+A +P +
Sbjct: 762 GLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCE-MIADGLVPKTST 820
Query: 370 YNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLC-----------RERR 418
YN+L+ NVG E L +M K+ G + + TY ++ LC ++
Sbjct: 821 YNVLISEFANVGKMLQARELLKEMGKR-GVSPNTSTYCTMISGLCKLCTHPDVEWNKKAM 879
Query: 419 YL-EASQLLEQM-SIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLED 463
YL EA LL++M K Y PC + + G + +A +L++
Sbjct: 880 YLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 926
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 165/387 (42%), Gaps = 19/387 (4%)
Query: 114 WTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR-SDLALQ 172
+ F+TL ++ +S +RL A + C + V N L++ G D
Sbjct: 57 YVSLFHTLFRLYLSCERLYGA-ARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSL 115
Query: 173 IFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLL 232
I+ +M G P+ + +L+ C GRL A LL + I D V Y T++
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISI-------DTVTYNTVI 168
Query: 233 DALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGS 292
LCE G +EA + LS++++ G+ YN L C G + K L+ E S
Sbjct: 169 SGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA-KALVDEI----S 223
Query: 293 VPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIK 352
+L ++ + Y+ I+EA + +M GF P F + + LCK +V E
Sbjct: 224 ELNLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL 280
Query: 353 VIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEM 412
++ E M ++ PN Y L+ +L L ++M + G D Y +L++
Sbjct: 281 LLRE-MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR-GIPVDLVVYTVLMDG 338
Query: 413 LCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
L + EA + + + + P +Y +L+ GLC G A + M+ + +P
Sbjct: 339 LFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Query: 473 ISVWKSLASLFCNLEMMKASSEIFNRL 499
+ + S+ + + M++ + + ++
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKM 425
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 198/492 (40%), Gaps = 46/492 (9%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N Y ++ L +G L +I QM + S ++S IN Y G+++EA++L
Sbjct: 363 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCG 163
+ + N V ++ T++ + + E A L + V+ + L+ L+ L
Sbjct: 423 RKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL-IGVEENNYILDALVNHLKR 481
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
GR + ++M +G ++ +Y L+ G A M ++G
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM----QERGMPW 537
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILR-KGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
D+V Y L+ + + GK + K +R KG++ +N + SQ G D EG +
Sbjct: 538 DVVSYNVLISGMLKFGKV--GADWAYKGMREKGIEPDIATFNIMMNSQRKQG-DSEGILK 594
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ------------------- 323
L + G PSL S N + L K++EA ++ +M
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 324 ----------------DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNS 367
G K +R ++ +A LCK+ +A V+ DM A +P++
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMG-DMEARGFIPDT 713
Query: 368 EVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLE 427
+N L+ VG+ S + + G + + TY ++ L E + L
Sbjct: 714 VTFNSLMHGYF-VGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 428 QMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLE 487
+M + P +YN+LI G +G ++ +MI+ G +P+ S + L S F N+
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 832
Query: 488 MMKASSEIFNRL 499
M + E+ +
Sbjct: 833 KMLQARELLKEM 844
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 141/330 (42%), Gaps = 19/330 (5%)
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
+CG V V ALN+L+++ C GR A+ + + + + +Y ++ GLC G
Sbjct: 122 ACG--VSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGL 176
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
EA L M + G D V Y TL+D C+ G F A ++ +I L
Sbjct: 177 ADEAYQFLSEMV----KMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL----- 227
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
+ + LS + IE R + ++ G P + +++++ L K+ E ++ E
Sbjct: 228 ITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLRE 284
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
M++ P + V +L K + A+ + + MV + VY +L+ L G
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQ-MVVRGIPVDLVVYTVLMDGLFKAG 343
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
+ E KM + + TY L++ LC+ A ++ QM KS P +Y
Sbjct: 344 DLREA-EKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Query: 442 NSLIKGLCSLGRQYEAVMWLEDMISQGKLP 471
+S+I G G EAV L M Q +P
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVP 432
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 162/390 (41%), Gaps = 23/390 (5%)
Query: 60 RLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFN 119
++G + I +R + + I+ GL DEA + + + T S+N
Sbjct: 141 KVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYN 200
Query: 120 TLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLAL--QIFQEM 177
TL+ A L VD + LNL+ + + +L + +++M
Sbjct: 201 TLIDGFCKVGNFVRAKAL-VD---------EISELNLITHTILLSSYYNLHAIEEAYRDM 250
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
G P+ +++ ++ LC G++ E LL M + + V Y TL+D+L +
Sbjct: 251 VMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREM----EEMSVYPNHVTYTTLVDSLFK 306
Query: 238 DGKFEEAIEILSKILRKGLKAPKRCYNRL--DLSQCSDGRDIEGTKRLIHEALIKGSVPS 295
+ A+ + S+++ +G+ Y L L + D R+ E T +++ E VP+
Sbjct: 307 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE---DNQVPN 363
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
+ +Y A+ L + A+ +I +M ++ P + + + K ++EA+ ++
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR 423
Query: 356 EDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCR 415
+ M N +PN Y ++ L G +E L+K + +G + L+ L R
Sbjct: 424 K-MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIE-LSKEMRLIGVEENNYILDALVNHLKR 481
Query: 416 ERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
R E L++ M K +Y SLI
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 174/430 (40%), Gaps = 18/430 (4%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y T+IS L G E + +M + + + I+ + G A L I
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 223
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS 167
+ N + T LL + +E A+ V + +V + +N LC G+
Sbjct: 224 ELNLITHT----ILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIIN----RLCKGGKV 275
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVV 227
+ +EM+ YPN +Y L+ L A L M R G D+VV
Sbjct: 276 LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR----GIPVDLVV 331
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEA 287
Y L+D L + G EA + +L Y L C G D+ + +I +
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAG-DLSSAEFIITQM 390
Query: 288 LIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRV 347
L K +P++ +Y++M + ++EA ++ +M+D+ P + + L K +
Sbjct: 391 LEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE 450
Query: 348 DEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYI 407
+ AI++ +E M + N+ + + L+ +L+ +G V + M K G T D+ Y
Sbjct: 451 EMAIELSKE-MRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSK-GVTLDQINYT 508
Query: 408 ILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW-LEDMIS 466
L+++ + A E+M + SYN LI G+ G+ W + M
Sbjct: 509 SLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV--GADWAYKGMRE 566
Query: 467 QGKLPEISVW 476
+G P+I+ +
Sbjct: 567 KGIEPDIATF 576
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 180/464 (38%), Gaps = 84/464 (18%)
Query: 9 LTPTYLSQIIRTQKNP-MKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDV 67
L+P + ++++ N + AL +F A+++ + H Y +I LG + + +
Sbjct: 92 LSPALIEEVLKKLSNAGVLALSVFKWAENQ-KGFKHTTSNYNALIESLGKIKQFKLIWSL 150
Query: 68 IEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVS 127
++ M+ K+T FA YA A V EAI F + +F + FN +L +
Sbjct: 151 VDDMKAKKLLSKET-FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSK 209
Query: 128 EDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRD 187
+ A ++F +M + P+
Sbjct: 210 SRNVGDAQ------------------------------------KVFDKMKKKRFEPDIK 233
Query: 188 SYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEI 247
SY IL++G + L + M +G D+V Y +++A C+ K+EEAI
Sbjct: 234 SYTILLEGWGQELNLLRVDEVNREM----KDEGFEPDVVAYGIIINAHCKAKKYEEAI-- 287
Query: 248 LSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLY 307
R +N ++ C PS + ++ L
Sbjct: 288 -------------RFFNEMEQRNCK---------------------PSPHIFCSLINGLG 313
Query: 308 SESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNS 367
SE K+++A + + GF + A V A C R+++A K ++E M PN+
Sbjct: 314 SEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDE-MRLKGVGPNA 372
Query: 368 EVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLE 427
Y+I+L +L + S E MS C TY I++ M C + R A ++ +
Sbjct: 373 RTYDIILHHLIRMQRSKEAYEVYQTMS----CEPTVSTYEIMVRMFCNKERLDMAIKIWD 428
Query: 428 QMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLP 471
+M K P ++SLI LC + EA + +M+ G P
Sbjct: 429 EMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 6/261 (2%)
Query: 240 KFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSY 299
K +EAI K+ G K +NR+ L S R++ +++ + K P + SY
Sbjct: 177 KVKEAIGAFHKMEEFGFKMESSDFNRM-LDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSY 235
Query: 300 NAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMV 359
+ E + D+V EM+D GF+P + + A CK + +EAI+ E M
Sbjct: 236 TILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE-ME 294
Query: 360 AVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRY 419
NC P+ ++ L+ L + LE + SK G + TY L+ C +R
Sbjct: 295 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFER-SKSSGFPLEAPTYNALVGAYCWSQRM 353
Query: 420 LEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
+A + +++M +K P A +Y+ ++ L + R EA + M + P +S ++ +
Sbjct: 354 EDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIM 410
Query: 480 ASLFCNLEMMKASSEIFNRLR 500
+FCN E + + +I++ ++
Sbjct: 411 VRMFCNKERLDMAIKIWDEMK 431
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 119/283 (42%), Gaps = 33/283 (11%)
Query: 22 KNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDT 81
+N A +F++ K + ++ + Y ++ G L + +V +M+ + E
Sbjct: 211 RNVGDAQKVFDKMKKK--RFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVV 268
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFV-D 140
+ IN + A +EAI F + Q NC F +L+ + SE +L A F
Sbjct: 269 AYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERS 328
Query: 141 NSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDG 200
S G+ +++ + N L+ A C R + A + EM +G PN +Y I++ L
Sbjct: 329 KSSGFPLEAPTY--NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQ 386
Query: 201 RLHEATHLLYSM---------------------------FW-RISQKGNGEDIVVYRTLL 232
R EA + +M W + KG + ++ +L+
Sbjct: 387 RSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 446
Query: 233 DALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR 275
ALC + K +EA E +++L G++ P ++RL + +GR
Sbjct: 447 TALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGR 489
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 106/228 (46%), Gaps = 10/228 (4%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
+A+ FNE + R K + + ++ ++I+ LG+ +L + + E+ + + + +
Sbjct: 285 EAIRFFNEMEQRNCKPSPH--IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNA 342
Query: 86 AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGW 145
+ Y + +++A + ++++ +L ++ R + A+ ++ SC
Sbjct: 343 LVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSC-- 400
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
+ V +++ C K R D+A++I+ EM +G P ++ L+ LCH+ +L EA
Sbjct: 401 --EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 458
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILR 253
M + + G ++ L L ++G+ ++ +++ K+ R
Sbjct: 459 CEYFNEML-DVGIRPPGH---MFSRLKQTLLDEGRKDKVTDLVVKMDR 502
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 201/457 (43%), Gaps = 28/457 (6%)
Query: 17 IIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSC 76
+++ QK+ + +L FN AK+R P +H+ +A ++ L + + ++
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPG-SHSLETHAIVLHTLTKNRKFKSAESIL-------- 138
Query: 77 ECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHG 136
+D + +++ A + D + ++ C + + F++L + + A
Sbjct: 139 --RDVLVNGGVDLPAK--VFDALLYSYRE-----CDSTPRVFDSLFKTFAHLKKFRNATD 189
Query: 137 LFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGL 196
F+ + V + N M +L G+GR D+AL+ ++EM PN + ++M G
Sbjct: 190 TFMQMK-DYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGY 248
Query: 197 CHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
C G+L + LL M + G V Y TL+ CE G A+++ + + + GL
Sbjct: 249 CRSGKLDKGIELLQDM----ERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL 304
Query: 257 KAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDE-A 315
+ +N L C + E +K + E P+ +YN + ++ YS+ E A
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASK-VFGEMKAVNVAPNTVTYNTL-INGYSQQGDHEMA 362
Query: 316 DKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLK 375
+ +M G + + A + LCK ++ +A + ++E + N +PNS ++ L+
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE-LDKENLVPNSSTFSALIM 421
Query: 376 NLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYW 435
N+ E L K + GC + +T+ +L+ CR + ASQ+L +M +S
Sbjct: 422 GQCVRKNADRGFE-LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 436 PCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
+ + + + GL G+ L++M + L E
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 127/308 (41%), Gaps = 29/308 (9%)
Query: 214 WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKIL-RKGLKAPKRCYNRLDLSQCS 272
W ++ + + +L L ++ KF+ A IL +L G+ P + ++ L S
Sbjct: 104 WAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSY-- 161
Query: 273 DGRDIEGTKRLIHEALIK---------------------GSVPSLSSYNAMAVDLYSESK 311
R+ + T R + ++L K G +P++ S NA L + +
Sbjct: 162 --RECDSTPR-VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGR 218
Query: 312 IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
+D A + EM+ P ++ C+ ++D+ I++++ DM + YN
Sbjct: 219 VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQ-DMERLGFRATDVSYN 277
Query: 372 ILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSI 431
L+ G ++ L+ L M K G + T+ L+ CR + EAS++ +M
Sbjct: 278 TLIAGHCEKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 432 KSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKA 491
+ P +YN+LI G G A + EDM+ G +I + +L C +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 492 SSEIFNRL 499
+++ L
Sbjct: 397 AAQFVKEL 404
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 201/457 (43%), Gaps = 28/457 (6%)
Query: 17 IIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSC 76
+++ QK+ + +L FN AK+R P +H+ +A ++ L + + ++
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPG-SHSLETHAIVLHTLTKNRKFKSAESIL-------- 138
Query: 77 ECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHG 136
+D + +++ A + D + ++ C + + F++L + + A
Sbjct: 139 --RDVLVNGGVDLPAK--VFDALLYSYRE-----CDSTPRVFDSLFKTFAHLKKFRNATD 189
Query: 137 LFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGL 196
F+ + V + N M +L G+GR D+AL+ ++EM PN + ++M G
Sbjct: 190 TFMQMK-DYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGY 248
Query: 197 CHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
C G+L + LL M + G V Y TL+ CE G A+++ + + + GL
Sbjct: 249 CRSGKLDKGIELLQDM----ERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL 304
Query: 257 KAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDE-A 315
+ +N L C + E +K + E P+ +YN + ++ YS+ E A
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASK-VFGEMKAVNVAPNTVTYNTL-INGYSQQGDHEMA 362
Query: 316 DKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLK 375
+ +M G + + A + LCK ++ +A + ++E + N +PNS ++ L+
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE-LDKENLVPNSSTFSALIM 421
Query: 376 NLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYW 435
N+ E L K + GC + +T+ +L+ CR + ASQ+L +M +S
Sbjct: 422 GQCVRKNADRGFE-LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 436 PCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
+ + + + GL G+ L++M + L E
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 127/308 (41%), Gaps = 29/308 (9%)
Query: 214 WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKIL-RKGLKAPKRCYNRLDLSQCS 272
W ++ + + +L L ++ KF+ A IL +L G+ P + ++ L S
Sbjct: 104 WAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSY-- 161
Query: 273 DGRDIEGTKRLIHEALIK---------------------GSVPSLSSYNAMAVDLYSESK 311
R+ + T R + ++L K G +P++ S NA L + +
Sbjct: 162 --RECDSTPR-VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGR 218
Query: 312 IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
+D A + EM+ P ++ C+ ++D+ I++++ DM + YN
Sbjct: 219 VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQ-DMERLGFRATDVSYN 277
Query: 372 ILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSI 431
L+ G ++ L+ L M K G + T+ L+ CR + EAS++ +M
Sbjct: 278 TLIAGHCEKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 432 KSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKA 491
+ P +YN+LI G G A + EDM+ G +I + +L C +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 492 SSEIFNRL 499
+++ L
Sbjct: 397 AAQFVKEL 404
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 191/411 (46%), Gaps = 18/411 (4%)
Query: 23 NPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTV 82
+P KAL + A++ + ++IS L SGR E + E++RQ + +
Sbjct: 284 DPSKALQLLGMAQA--TGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 83 FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNS 142
+ + + Y G + +A ++ + + +++ L+ V+ R E+A + +
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 143 CGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRL 202
G +V+ + L+ +G Q+ +EM G P+R Y +++ G+
Sbjct: 402 AG-DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF---GKF 457
Query: 203 HEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC 262
+ H + + F R+ +G D V + TL+D C+ G+ A E+ + R+G
Sbjct: 458 NCLDHAM-TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 263 YNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSES-KIDEADKVIVE 321
YN + ++ D + KRL+ + +G +P++ ++ + VD+Y +S + ++A + + E
Sbjct: 517 YNIM-INSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL-VDVYGKSGRFNDAIECLEE 574
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAI---KVIEEDMVAVNCLPNSEVYNILLKNLR 378
M+ G KP+ ++ A + A + ++A+ +V+ D + + L + + N ++ R
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 634
Query: 379 NVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQM 429
+ + AVL+ + K+ G D TY L++ L R ++ + + E+M
Sbjct: 635 D-AEAFAVLQYM----KENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 187/448 (41%), Gaps = 14/448 (3%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K T Y +I + + + ++I +MRQD + ++ I + +D
Sbjct: 192 KQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSV 251
Query: 100 --ITLFKNIPQFNCVNWTQSFNTLLQ-IMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNL 156
+ L+K I + Q N ++ S D +A L + + G K+ L
Sbjct: 252 MLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKT--ATLVS 309
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
++ AL GR+ A +F+E+ G P +Y L+KG G L +A SM +
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAE----SMVSEM 365
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
++G D Y L+DA G++E A +L ++ ++ ++RL L+ D +
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRL-LAGFRDRGE 424
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK-IDEADKVIVEMQDRGFKPTRAIFE 335
+ T +++ E G P YN + +D + + +D A M G +P R +
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVV-IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 336 AKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSK 395
+ CK R A ++ E M CLP + YNI++ + + + L KM K
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEA-MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKM-K 541
Query: 396 KVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQY 455
G + T+ L+++ + R+ +A + LE+M P + YN+LI G
Sbjct: 542 SQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSE 601
Query: 456 EAVMWLEDMISQGKLPEISVWKSLASLF 483
+AV M S G P + SL + F
Sbjct: 602 QAVNAFRVMTSDGLKPSLLALNSLINAF 629
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 144/333 (43%), Gaps = 9/333 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y+ +I +GR R V+++M + VF+ + + + G + + K +
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
Q +N ++ + L+ A F D ++ N L+ C GR
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF-DRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
+A ++F+ M+ +GC P +Y I++ R + LL M +G ++V
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKM----KSQGILPNVV 550
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
+ TL+D + G+F +AIE L ++ GLK YN L + G E
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLS-EQAVNAFRV 609
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKID-EADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
G PSL + N++ ++ + E + D EA V+ M++ G KP + + AL +V
Sbjct: 610 MTSDGLKPSLLALNSL-INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 668
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLR 378
+ + + V+ E+M+ C P+ + ++L LR
Sbjct: 669 KF-QKVPVVYEEMIMSGCKPDRKARSMLRSALR 700
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 151/380 (39%), Gaps = 55/380 (14%)
Query: 170 ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYR 229
AL + +M G + +Y+++++ L ++ +L ++ I + D+ +
Sbjct: 216 ALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSV--MLLRLYKEIERDKLELDVQLVN 273
Query: 230 TLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALI 289
++ + G +A+++L GL A + + GR +E + L E
Sbjct: 274 DIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA-EALFEELRQ 332
Query: 290 KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDE 349
G P +YNA+ + +A+ ++ EM+ RG P + + A R +
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 350 AIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIIL 409
A +++ ++M A + PNS V++ LL R+ G + L +M K +G DR+ Y ++
Sbjct: 393 A-RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM-KSIGVKPDRQFYNVV 450
Query: 410 LEML-----------------------------------CRERRYLEASQLLEQMSIKSY 434
++ C+ R++ A ++ E M +
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 435 WPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF----------- 483
PCA +YN +I R + L M SQG LP + +L ++
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 484 CNLEM----MKASSEIFNRL 499
C EM +K SS ++N L
Sbjct: 571 CLEEMKSVGLKPSSTMYNAL 590
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 158/403 (39%), Gaps = 45/403 (11%)
Query: 78 CKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL 137
K S I+ A++G EA LF+ + Q T+++N LL+ V L+ A +
Sbjct: 302 AKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESM 361
Query: 138 FVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLC 197
V V H +LL+ A GR + A + +EM+ PN ++ L+ G
Sbjct: 362 -VSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFR 420
Query: 198 HDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
G + +L M G D Y ++D + + A+ ++L +G++
Sbjct: 421 DRGEWQKTFQVLKEM----KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIE 476
Query: 258 APKRCYNRLDLSQCSDGRDIEGTKRLIHEAL-IKGSVPSLSSYNAMAVDLYSESKIDEAD 316
+ +N L C GR I + + EA+ +G +P ++YN M + + D+
Sbjct: 477 PDRVTWNTLIDCHCKHGRHIVAEE--MFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534
Query: 317 KVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKN 376
+++ +M+ +G P V K R ++AI+ +EE M +V P+S +YN L+
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE-MKSVGLKPSSTMYNALINA 593
Query: 377 LRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWP 436
G S + + M T+D P
Sbjct: 594 YAQRGLSEQAVNAFRVM------TSD------------------------------GLKP 617
Query: 437 CADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
+ NSLI R EA L+ M G P++ + +L
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 146/352 (41%), Gaps = 9/352 (2%)
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
V +N ++ G ALQ+ G + ++ L GR EA
Sbjct: 269 VQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE---- 324
Query: 211 SMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQ 270
++F + Q G Y LL + G ++A ++S++ ++G+ + Y+ L +
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 271 CSDGRDIEGTKRLIHEALIKGSV-PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKP 329
+ GR + R++ + + G V P+ ++ + + + +V+ EM+ G KP
Sbjct: 385 VNAGR--WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 330 TRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLES 389
R + + K + +D A+ + M++ P+ +N L+ G E
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDR-MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 390 LNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLC 449
M ++ GC TY I++ + R+ + +LL +M + P ++ +L+
Sbjct: 502 FEAMERR-GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 560
Query: 450 SLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
GR +A+ LE+M S G P +++ +L + + + + + F + S
Sbjct: 561 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS 612
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N + T++ + G SGR + + +E+M+ + T++ + IN YA GL ++A+ F
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCG 163
+ + + N+L+ EDR +A + VK V LM AL
Sbjct: 608 RVMTSDGLKPSLLALNSLINAF-GEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGL 196
+ +++EM GC P+R + ++L L
Sbjct: 667 VDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 180/425 (42%), Gaps = 55/425 (12%)
Query: 116 QSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQ 175
+++ +++ V E +E A + +D G+ + V A L+ C AL +F
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRV-MDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFN 369
Query: 176 EMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDA- 234
M+ +G P++ ++++++ C + + +A + R+ V+ T++
Sbjct: 370 RMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEF----YMRMKSVRIAPSSVLVHTMIQGC 425
Query: 235 ---------------------------------LCEDGKFEEAIEILSKILRKGLKAPKR 261
C+ GK + A L + +KG++
Sbjct: 426 LKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVV 485
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
YN + L+ C ++++ + + E L KG P+ +Y+ + + A VI +
Sbjct: 486 FYNNMMLAHCR-MKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIK----VIEEDMVAVNCLPNSEVYNILLKNL 377
M F+ I+ + LCKV + +A + +I+E +++C YN ++
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTS----YNSIIDGF 600
Query: 378 RNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRY---LEASQLLEQMSIKSY 434
VG++ + +E+ +MS+ G + + T+ L+ C+ R LE + ++ M +K
Sbjct: 601 VKVGDTDSAVETYREMSEN-GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD 659
Query: 435 WPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSE 494
P +Y +LI G C A ++ G +P +SV+ SL S F NL M A+ +
Sbjct: 660 LP---AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAID 716
Query: 495 IFNRL 499
++ ++
Sbjct: 717 LYKKM 721
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/493 (20%), Positives = 194/493 (39%), Gaps = 82/493 (16%)
Query: 61 LGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNT 120
LG+ D+ +M ++ +F+ + + +++AI + + + +T
Sbjct: 361 LGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHT 420
Query: 121 LLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHAL--NLLMYALCGKGRSDLALQIFQEMD 178
++Q + + EAA +F D+ W H N + C +G+ D A + M+
Sbjct: 421 MIQGCLKAESPEAALEIFNDSFESW----IAHGFMCNKIFLLFCKQGKVDAATSFLKMME 476
Query: 179 YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCED 238
+G PN Y +M C + L S+F + +KG + Y L+D ++
Sbjct: 477 QKGIEPNVVFYNNMMLAHCRMKNMD----LARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532
Query: 239 GKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLS- 297
+ A ++++++ +A + YN + C G+ + + L + LIK S+S
Sbjct: 533 KDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML--QNLIKEKRYSMSC 590
Query: 298 -SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
SYN++ D A + EM + G P F + + CK +R+D A+++ E
Sbjct: 591 TSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHE 650
Query: 357 --------DMVAVNCL--------------------------PNSEVYNILLKNLRNVGN 382
D+ A L PN VYN L+ RN+G
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 383 SAAVLESLNKMSK----------------------------------KVGCTADRETYII 408
A ++ KM +G D +++
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
L+ L ++ ++L+AS++LE+M K P Y+++I G G EA ++M+ +G
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 469 KLPEISVWKSLAS 481
+ + +V+ L S
Sbjct: 831 IVHDDTVFNLLVS 843
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 141/372 (37%), Gaps = 48/372 (12%)
Query: 138 FVDNS--CGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKG 195
VD+S G+E+ R A N L+ A R D A+ F M + P ++
Sbjct: 156 LVDSSKRFGFELTPR--AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSS 213
Query: 196 LCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKG 255
L + EA + Y+ I G D V + L+ A + K EEA++I +++ +G
Sbjct: 214 LVRSNLIDEAKEI-YNKMVLIGVAG---DNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 256 LKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP-SLSSYNAMAVDLYSESKIDE 314
+ P L + D+ L+ E K VP S +Y ++ V E ++E
Sbjct: 270 AE-PDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEE 328
Query: 315 ADKVIVE-----------------------------------MQDRGFKPTRAIFEAKVA 339
A +V+ E M++ G P + +F V
Sbjct: 329 AVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVE 388
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
CK +++AI+ M +V P+S + + +++ + A LE N +
Sbjct: 389 WFCKNMEMEKAIEFYMR-MKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIA 447
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVM 459
I LL C++ + A+ L+ M K P YN+++ C + A
Sbjct: 448 HGFMCNKIFLL--FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARS 505
Query: 460 WLEDMISQGKLP 471
+M+ +G P
Sbjct: 506 IFSEMLEKGLEP 517
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 102/240 (42%), Gaps = 10/240 (4%)
Query: 32 NEAKSRYPKYTHNG--PVYATMISILG---TSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
+ A Y + + NG P T S++ S R+ ++ +M+ + + +
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWE 146
I+ + + A TLF +P+ + +N+L+ + +++AA L+
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY-KKMVNDG 725
Query: 147 VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEAT 206
+ + ++ L G +LA ++ E+ G P+ + +L+ GL G+ +A+
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKAS 785
Query: 207 HLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL 266
+L M +K ++++Y T++ +G EA + ++L KG+ +N L
Sbjct: 786 KMLEEM----KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL 841
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 95/211 (45%), Gaps = 3/211 (1%)
Query: 293 VPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIK 352
VP + N + L + IDEA ++ +M G + + A + + +EA+K
Sbjct: 201 VPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVK 260
Query: 353 VIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEM 412
+ M + P+ ++++ ++ + L+ L +M K+G A +ETY ++
Sbjct: 261 IFRRVM-SRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVA 319
Query: 413 LCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
+E EA +++++M + SL+ G C +A+ M +G P+
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379
Query: 473 ISVWKSLASLFC-NLEMMKASSEIFNRLRSL 502
++ + FC N+EM KA E + R++S+
Sbjct: 380 KVMFSVMVEWFCKNMEMEKA-IEFYMRMKSV 409
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/522 (22%), Positives = 210/522 (40%), Gaps = 66/522 (12%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGR----- 60
P + P ++R Q + +A+ F K K + G Y ++ IL +S +
Sbjct: 75 PHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGN-YCLLLHILVSSKKFPLAM 133
Query: 61 --------LGEMRDVIEQMR-----QDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
L ++ ++ R D C VF + Y GLV+E +F+ +
Sbjct: 134 QFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVL 193
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS 167
+ N LL ++ D +E ++ C + + N+L C
Sbjct: 194 DSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY-SVMCRVGIHPNTYTFNILTNVFCNDSNF 252
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVV 227
++M+ +G P+ +Y L+ C GRL EA + LY + +R + D+V
Sbjct: 253 REVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFY-LYKIMYR---RRVVPDLVT 308
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEA 287
Y +L+ LC+DG+ EA + +++ +G+K YN L + C +G ++ +K+L+HE
Sbjct: 309 YTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGM-MQQSKKLLHEM 367
Query: 288 LIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRV 347
L VP + + E ++ A +VE++ + + + +LC+ +
Sbjct: 368 LGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKP 427
Query: 348 DEAIKVIEEDMVAVNCLPNSEVYNILLKNLR--NVGNSAAVLESLNKMSKKVGCTADRET 405
A +++ + E YN L+++L + A VL+ K +V D +T
Sbjct: 428 FAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQV---LDAKT 484
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWP----CA----------------------- 438
Y L+ LCR R EA L+ +M P C
Sbjct: 485 YRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFA 544
Query: 439 --------DSYNSLIKGLCSLGRQYEAVMWLEDMISQ-GKLP 471
+SYNSL+K +C G Y+ + L++ + + G +P
Sbjct: 545 MEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVP 586
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 138/314 (43%), Gaps = 8/314 (2%)
Query: 172 QIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTL 231
Q++ M G +PN ++ IL C+D E L M ++G D+V Y TL
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKM----EEEGFEPDLVTYNTL 277
Query: 232 LDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG 291
+ + C G+ +EA + + R+ + Y L C DGR + + H + +G
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGR-VREAHQTFHRMVDRG 336
Query: 292 SVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAI 351
P SYN + E + ++ K++ EM P R + V + R+ A+
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 352 K-VIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILL 410
V+E + V+ +P EV + L+ +L G A L+++ ++ G A ETY L+
Sbjct: 397 NFVVELRRLKVD-IP-FEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLI 454
Query: 411 EMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL 470
E L R EA L ++ ++ A +Y +LI LC +GR EA + +M
Sbjct: 455 ESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVK 514
Query: 471 PEISVWKSLASLFC 484
P+ + +L +C
Sbjct: 515 PDSFICGALVYGYC 528
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 173/406 (42%), Gaps = 45/406 (11%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N + + ++ E+ D +E+M ++ E + + ++ Y G + EA L+
Sbjct: 235 NTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLY 294
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSCGWEVKSRVHALNLLMYA 160
K + + V ++ +L++ + + R+ AH F VD +K + N L+YA
Sbjct: 295 KIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG----IKPDCMSYNTLIYA 350
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
C +G + ++ EM P+R + ++++G +GRL A + + + R+
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL-RRLKVDI 409
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKIL-RKGLKAPKRCYNRL--DLSQCSDGRDI 277
E V L+ +LC++GK A +L +I+ +G +A YN L LS+C
Sbjct: 410 PFE---VCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCD----- 461
Query: 278 EGTKRLIHEALI-------KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
I EAL+ + V +Y A+ L + EA+ ++ EM D KP
Sbjct: 462 -----AIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPD 516
Query: 331 RAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESL 390
I A V CK D+A +++ + + E YN L+K + G L
Sbjct: 517 SFICGALVYGYCKELDFDKAERLLSLFAMEFRIF-DPESYNSLVKAVCETGCGYKKALEL 575
Query: 391 NKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWP 436
+ +++G +R T L+ Q+LEQ S+ ++ P
Sbjct: 576 QERMQRLGFVPNRLTCKYLI-------------QVLEQPSLPNHLP 608
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 312 IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
++E +V E+ D GF + + L K+ +++ +V M V PN+ +N
Sbjct: 182 VEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV-MCRVGIHPNTYTFN 240
Query: 372 ILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSI 431
IL N N V + L KM ++ G D TY L+ CR R EA L + M
Sbjct: 241 ILTNVFCNDSNFREVDDFLEKMEEE-GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYR 299
Query: 432 KSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKA 491
+ P +Y SLIKGLC GR EA M+ +G P+ + +L +C MM+
Sbjct: 300 RRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQ 359
Query: 492 SSEIFNRL 499
S ++ + +
Sbjct: 360 SKKLLHEM 367
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 120/329 (36%), Gaps = 53/329 (16%)
Query: 170 ALQIFQEMDYQ-GCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE----- 223
A+ F+ + + G PN +Y +L+ L + A L + S+K +
Sbjct: 96 AITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVL 155
Query: 224 ---------DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
D VV+ L+ + G EE + ++L G N L
Sbjct: 156 VSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGL-LKL 214
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
+E ++ G P+ ++N + ++S E D + +M++ GF+P +
Sbjct: 215 DLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTY 274
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
V++ C+ R+ EA + Y I+ + R V
Sbjct: 275 NTLVSSYCRRGRLKEAFYL----------------YKIMYR--RRV-------------- 302
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
D TY L++ LC++ R EA Q +M + P SYN+LI C G
Sbjct: 303 -----VPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMM 357
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLF 483
++ L +M+ +P+ K + F
Sbjct: 358 QQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 155/376 (41%), Gaps = 49/376 (13%)
Query: 2 TIRWPRVLTPTYLSQIIR-TQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGR 60
++R P +T ++ +++R T ++ +L FN A+S P YT Y + L + +
Sbjct: 70 SLRLP--VTSEFVFRVLRATSRSSNDSLRFFNWARSN-PSYTPTSMEYEELAKSLASHKK 126
Query: 61 LGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQ-FNCVNWTQSFN 119
M +++QM+ S + I Y G VD+A+ LF +P+ C +N
Sbjct: 127 YESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYN 186
Query: 120 TLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDY 179
+LL +ALC A + + M
Sbjct: 187 SLL------------------------------------HALCDVKMFHGAYALIRRMIR 210
Query: 180 QGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWR-ISQKGNGEDIVVYRTLLDALCED 238
+G P++ +YAIL+ G C G++ EA L M R + G D+ L++ L
Sbjct: 211 KGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDL-----LIEGLLNA 265
Query: 239 GKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSS 298
G E A E++SK+ + G + +N L + S ++E + + A G + +
Sbjct: 266 GYLESAKEMVSKMTKGGFVPDIQTFNIL-IEAISKSGEVEFCIEMYYTACKLGLCVDIDT 324
Query: 299 YNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDM 358
Y + + KIDEA +++ + G KP +++ + +C+ D+A DM
Sbjct: 325 YKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFF-SDM 383
Query: 359 VAVNCLPNSEVYNILL 374
PN VY +L+
Sbjct: 384 KVKAHPPNRPVYTMLI 399
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
G + + VY +LL ALC+ F A ++ +++RKGLK KR Y L CS G
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAG----- 231
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
K+ EA + + EM RGF P + +
Sbjct: 232 -------------------------------KMKEAQEFLDEMSRRGFNPPARGRDLLIE 260
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
L ++ A +++ + M +P+ + +NIL++ + G +E + + K+G
Sbjct: 261 GLLNAGYLESAKEMVSK-MTKGGFVPDIQTFNILIEAISKSGEVEFCIE-MYYTACKLGL 318
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVM 459
D +TY L+ + + + EA +LL + P Y +IKG+C G +A
Sbjct: 319 CVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFS 378
Query: 460 WLEDMISQGKLPEISVWKSLASL 482
+ DM + P V+ L ++
Sbjct: 379 FFSDMKVKAHPPNRPVYTMLITM 401
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 18/273 (6%)
Query: 233 DALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG--RDIEGTKRLIHEALI- 289
D+ G + AI + I+R+ + P+R N L L S+ R + T R +++L
Sbjct: 39 DSTPTKGDYFAAINHVVNIVRREIH-PERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRF 97
Query: 290 -------KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
P+ Y +A L S K + K++ +M+D + +
Sbjct: 98 FNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYG 157
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTAD 402
K VD+A+++ + C +VYN LL L +V + +M +K G D
Sbjct: 158 KNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK-GLKPD 216
Query: 403 RETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLE 462
+ TY IL+ C + EA + L++MS + + P A + LI+GL + G A +
Sbjct: 217 KRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVS 276
Query: 463 DMISQGKLPEISVWKSLASLFCNLEMMKASSEI 495
M G +P+I + L +E + S E+
Sbjct: 277 KMTKGGFVPDIQTFNIL------IEAISKSGEV 303
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 15/262 (5%)
Query: 252 LRKGLKAPKRCYNRLDLSQCSDGRDIEG------------TKRLIH--EALIKGSVPSLS 297
+R +++ R +N L+ Q SD +G +R IH +L +P S
Sbjct: 18 IRASIESTIRHFNSLEPLQSSDSTPTKGDYFAAINHVVNIVRREIHPERSLNSLRLPVTS 77
Query: 298 SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEED 357
+ + S S D + + PT +E +L + + K++++
Sbjct: 78 EFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQ- 136
Query: 358 MVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRER 417
M ++ + E +++ G+ +E N + K +GC + Y LL LC +
Sbjct: 137 MKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVK 196
Query: 418 RYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWK 477
+ A L+ +M K P +Y L+ G CS G+ EA +L++M +G P
Sbjct: 197 MFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRD 256
Query: 478 SLASLFCNLEMMKASSEIFNRL 499
L N ++++ E+ +++
Sbjct: 257 LLIEGLLNAGYLESAKEMVSKM 278
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 211/498 (42%), Gaps = 33/498 (6%)
Query: 9 LTPTYLSQIIRTQKNP---MKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
L+ + + I+ KNP +AL F+ + S H YA I IL + L + R
Sbjct: 75 LSDSLIETILLRFKNPETAKQALSFFHWS-SHTRNLRHGIKSYALTIHILVKARLLIDAR 133
Query: 66 DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIM 125
+IE +S +N ++ LVD + ++ V F+ L+Q
Sbjct: 134 ALIE--------------SSLLNSPPDSDLVDSLLDTYEISSSTPLV-----FDLLVQCY 174
Query: 126 VSEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYP 184
LE +F CG+ + V LN L++ DL +I++ + YP
Sbjct: 175 AKIRYLELGFDVFKRLCDCGFTLS--VITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYP 232
Query: 185 NRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEA 244
N + I+++ LC +GRL E LL RI K ++V +L+ + E+ + EE+
Sbjct: 233 NEITIRIMIQVLCKEGRLKEVVDLLD----RICGKRCLPSVIVNTSLVFRVLEEMRIEES 288
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAV 304
+ +L ++L K + Y+ + ++ +G D+ +++ E L +G + Y
Sbjct: 289 MSLLKRLLMKNMVVDTIGYSIVVYAKAKEG-DLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
+ + EA++++ EM++ G P F + + ++ ++ E MV +
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEV-MVTRGLM 406
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
P+ +N ++K++ + N E L K K G D TY L+ +A +
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDK-GFVPDEHTYSHLIRGFIEGNDIDQALK 465
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
L +M + P + + SLI GLC+ G+ +L+ M + P ++ +L F
Sbjct: 466 LFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQ 525
Query: 485 NLEMMKASSEIFNRLRSL 502
+ + ++N + S+
Sbjct: 526 KIGDKTNADRVYNEMISV 543
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 150/347 (43%), Gaps = 8/347 (2%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+ H+ +Y IL + ++ VIE R++ C + + A L DEA+
Sbjct: 91 HRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEAL 150
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
+ + P+FN T ++N ++++ + L A L + C + V ++
Sbjct: 151 WVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDC-VGLYPDVITYTSMING 209
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
C G+ D A ++ +EM C N +Y+ +++G+C G + A LL M + G
Sbjct: 210 YCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEME---KEDG 266
Query: 221 NG---EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDI 277
G + V Y ++ A CE + EEA+ +L ++ +G + L + D+
Sbjct: 267 GGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDV 326
Query: 278 EGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAK 337
+ +LI + + G V +++ V L + +EA+K+ M RG +P
Sbjct: 327 KALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHV 386
Query: 338 VAALCKVSRVDEAIKVIEE-DMVAVNCLPNSEVYNILLKNLRNVGNS 383
LC + R + + +E + V +S+++ +LL L GNS
Sbjct: 387 FRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNS 433
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 298 SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEED 357
+YN + + ++ AD +I EM G P + + + C ++D+A ++ +E
Sbjct: 167 AYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKE- 225
Query: 358 MVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVG---CTADRETYIILLEMLC 414
M +C+ NS Y+ +L+ + G+ LE L +M K+ G + + TY ++++ C
Sbjct: 226 MSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFC 285
Query: 415 RERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEIS 474
+RR EA +L++M + P + LI+G+ +A+ L D + KL +S
Sbjct: 286 EKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLV--KLGGVS 343
Query: 475 VWKSLASLFCNLEMMK 490
+ + +S +L MK
Sbjct: 344 LSECFSSATVSLIRMK 359
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 134/311 (43%), Gaps = 7/311 (2%)
Query: 147 VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEAT 206
+K V +L+ LC AL++ + M +G PN +Y+ L+ GLC GRL +A
Sbjct: 44 IKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAE 103
Query: 207 HLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL 266
L+ M K +++ + L+DA + GK + + +++ + Y+ L
Sbjct: 104 RRLHEM----DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 159
Query: 267 DLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRG 326
C R E K ++ + KG P++ +Y+ +A + S++D+ K++ +M RG
Sbjct: 160 IYGLCMHNRVDEAIK-MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG 218
Query: 327 FKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAV 386
+ + ++D A+ V M + +PN YNI+L L G
Sbjct: 219 VAANTVSCNTLIKGYFQAGKIDLALGVFGY-MTSNGLIPNIRSYNIVLAGLFANGEVEKA 277
Query: 387 LESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIK 446
L M +K D TY I++ +C+ EA L ++ K P +Y +I
Sbjct: 278 LSRFEHM-QKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 336
Query: 447 GLCSLGRQYEA 457
L G + EA
Sbjct: 337 ELNRAGMRTEA 347
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 150/324 (46%), Gaps = 15/324 (4%)
Query: 181 GCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGK 240
G P+ + + L+ G C + +A ++ M + G D+VV L+D LC++
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM----EKMGIKRDVVVDTILIDTLCKNRL 63
Query: 241 FEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYN 300
A+E+L ++ +G+ Y+ L C GR + +RL HE K P++ +++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL-HEMDSKKINPNVITFS 122
Query: 301 AMAVDLYSE----SKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
A+ +D Y++ SK+D K++++M P + + + LC +RVDEAIK+++
Sbjct: 123 AL-IDAYAKRGKLSKVDSVYKMMIQMS---IDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 357 DMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRE 416
M++ C PN Y+ L ++ L+ M ++ G A+ + L++ +
Sbjct: 179 -MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR-GVAANTVSCNTLIKGYFQA 236
Query: 417 RRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVW 476
+ A + M+ P SYN ++ GL + G +A+ E M +I +
Sbjct: 237 GKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITY 296
Query: 477 KSLASLFCNLEMMKASSEIFNRLR 500
+ C M+K + ++F +L+
Sbjct: 297 TIMIHGMCKACMVKEAYDLFYKLK 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 5/224 (2%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
K N ++ +I G+L ++ V + M Q S + ++S I VDEA
Sbjct: 113 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA 172
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
I + + C +++TL R++ L +D+ V + + N L+
Sbjct: 173 IKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKL-LDDMPQRGVAANTVSCNTLIK 231
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
G+ DLAL +F M G PN SY I++ GL +G + +A S F + +
Sbjct: 232 GYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA----LSRFEHMQKT 287
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
N DI+ Y ++ +C+ +EA ++ K+ K ++ + Y
Sbjct: 288 RNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAY 331
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 180/414 (43%), Gaps = 11/414 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y+ +IS GR + ++M+ + + + ++ + + IY G V++A+ LF+ +
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ C ++ L++ + R++ A+G + D + V LN LM L GR
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKD-MLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
+ +F EM C P SY ++K L + + H + + S F ++
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKAL-FESKAHVSE--VSSWFDKMKADSVSPSEF 410
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
Y L+D C+ + E+A+ +L ++ KG Y L ++ + E L E
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL-INALGKAKRYEAANELFKE 469
Query: 287 ALIKGSVPSLSS--YNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
+K + ++SS Y M K+ EA + EM+++G P + A ++ + K
Sbjct: 470 --LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
++EA ++ + M C + +NI+L G +E + K G D
Sbjct: 528 GMINEANSLLRK-MEENGCRADINSHNIILNGFARTGVPRRAIEMFETI-KHSGIKPDGV 585
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAV 458
TY LL + EA++++ +M K + A +Y+S++ + ++ + + V
Sbjct: 586 TYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDV 639
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 148/374 (39%), Gaps = 45/374 (12%)
Query: 165 GRSDL---ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
GR+ + AL +F + + C P +Y ++ L +G+ HE H +Y+ + +G+
Sbjct: 173 GRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQ-HEKVHEVYT---EMCNEGD 228
Query: 222 -GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
D + Y L+ + + G+ + AI + ++ ++ ++ Y L G+ +E
Sbjct: 229 CFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK-VEKA 287
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
L E G P++ +Y + L ++DEA +M G P +
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
L KV RV+E V E M C P YN ++K L + + S K +
Sbjct: 348 LGKVGRVEELTNVFSE-MGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSL--------- 451
TY IL++ C+ R +A LLE+M K + PC +Y SLI L
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 452 --------------------------GRQYEAVMWLEDMISQGKLPEISVWKSLASLFCN 485
G+ EAV +M +QG P++ + +L S
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 486 LEMMKASSEIFNRL 499
M+ ++ + ++
Sbjct: 527 AGMINEANSLLRKM 540
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 137/319 (42%), Gaps = 12/319 (3%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+ H Y ++ I G M ++++M QD F I AGL +A+
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDR---LEAAHGLFVDNSCGWEVKSRVHALNLL 157
F FN + S+N +L ++ + +E + +++ +V + N+L
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLT----YNIL 260
Query: 158 MYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRIS 217
++ G+ D ++F EM G P+ +Y IL+ L + A L M
Sbjct: 261 LWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHM----K 316
Query: 218 QKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDI 277
+ G ++ Y TL+D L G E L ++++ G + CY + G ++
Sbjct: 317 EVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSG-EL 375
Query: 278 EGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAK 337
+ K + E +KG +P++ +YN+M L + EA ++ EM+ RG P ++
Sbjct: 376 DKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
Query: 338 VAALCKVSRVDEAIKVIEE 356
V+ L K ++ EA KVI E
Sbjct: 436 VSYLRKAGKLSEARKVIRE 454
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 134/320 (41%), Gaps = 16/320 (5%)
Query: 167 SDLALQIFQEMDYQGCYPNR-DSYAILMKGLCHDGRLHEATHLLYSMFWRIS----QKGN 221
+ LA + F Q C+ + +SY +LMK G Y WR+ Q G
Sbjct: 129 AKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGE--------YKAMWRLVDEMVQDGF 180
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
+ L+ + E G ++A+ K + K YN + L+ + + +
Sbjct: 181 PTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAI-LNSLLGVKQYKLIE 239
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
+ + L G P + +YN + Y K+D D++ EM GF P + + L
Sbjct: 240 WVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHIL 299
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
K ++ A+ + M V P+ Y L+ L GN A L++M K GC
Sbjct: 300 GKGNKPLAALTTLNH-MKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVK-AGCRP 357
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
D Y +++ +A ++ +M++K P +YNS+I+GLC G EA L
Sbjct: 358 DVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLL 417
Query: 462 EDMISQGKLPEISVWKSLAS 481
++M S+G P V+ +L S
Sbjct: 418 KEMESRGCNPNFVVYSTLVS 437
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 118/300 (39%), Gaps = 5/300 (1%)
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSMF-WRISQKGNGEDIVVYRTLLDALCEDGKFEEA 244
R+ +++ L +D + A L Y F W Q+ + Y L+ E G+++
Sbjct: 110 REVLVGILRNLSYDNKARCAK-LAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAM 168
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAV 304
++ ++++ G R +N L S G + + + P SYNA+
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYR-PFKHSYNAILN 227
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
L + + V +M + GF P + + ++ ++D ++ +E M
Sbjct: 228 SLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDE-MARDGFS 286
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
P+S YNILL L A L +LN M K+VG Y L++ L R
Sbjct: 287 PDSYTYNILLHILGKGNKPLAALTTLNHM-KEVGIDPSVLHYTTLIDGLSRAGNLEACKY 345
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
L++M P Y +I G G +A +M +G+LP + + S+ C
Sbjct: 346 FLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLC 405
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 8/213 (3%)
Query: 46 PVYATMISILGTSGRLGEMRD---VIEQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
P T +L T+ RLG+M + ++M +D + ++I A+T
Sbjct: 252 PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTT 311
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
++ + + TL+ + LEA F+D + V +++
Sbjct: 312 LNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACK-YFLDEMVKAGCRPDVVCYTVMITGYV 370
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
G D A ++F+EM +G PN +Y +++GLC G EA LL M +G
Sbjct: 371 VSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM----ESRGCN 426
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKG 255
+ VVY TL+ L + GK EA +++ ++++KG
Sbjct: 427 PNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 171/457 (37%), Gaps = 81/457 (17%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
+A+ F + R P T + Y+ ++ LG M DV++ M +
Sbjct: 132 EAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTI 191
Query: 86 AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGW 145
A++ + V AI LF+ F T+SFN
Sbjct: 192 AMDSFVRVHYVRRAIELFEESESFGVKCSTESFNA------------------------- 226
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYP-NRDSYAILMKGLCHDGRLHE 204
L+ LC + A +F +G P + SY I++ G G + E
Sbjct: 227 -----------LLRCLCERSHVSAAKSVFNAK--KGNIPFDSCSYNIMISGWSKLGEVEE 273
Query: 205 ATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN 264
+L M + G G D + Y L++ L G+ +++EI I KG
Sbjct: 274 MEKVLKEMV----ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG--------- 320
Query: 265 RLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQD 324
+VP + YNAM + S DE+ + M D
Sbjct: 321 ---------------------------NVPDANVYNAMICNFISARDFDESMRYYRRMLD 353
Query: 325 RGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSA 384
+P + V+ L K +V +A+++ EE M++ LP + + LK L + G
Sbjct: 354 EECEPNLETYSKLVSGLIKGRKVSDALEIFEE-MLSRGVLPTTGLVTSFLKPLCSYGPPH 412
Query: 385 AVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSL 444
A + K S+K GC Y +LL+ L R + + ++M Y + Y +
Sbjct: 413 AAMVIYQK-SRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYI 471
Query: 445 IKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLAS 481
+ GLC +G AV+ +E+ + +G P V+ L+S
Sbjct: 472 VDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSS 508
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 188/432 (43%), Gaps = 28/432 (6%)
Query: 50 TMISILGT---SGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
T++SILG+ SGR E +++E +++ + K + + I ++ + A+ +
Sbjct: 611 TLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFAD 670
Query: 107 PQFN--CVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLMYALCG 163
P + C + + TLL V+ + A +F D G E V +++Y C
Sbjct: 671 PCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVY--CK 728
Query: 164 KGRSDLALQIFQEMDYQG----CYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
G + A Q+ + + +G C P Y +++ +A S+ + Q
Sbjct: 729 LGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAE----SVVGNLRQS 781
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
G D+ + +L+ A + G +E A I + ++R G N L + C DGR +E
Sbjct: 782 GRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR-LEE 840
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
++ E G S SS M I E K+ M+ G+ PT ++ +
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
LCK RV +A +++ +M N ++N +LK + + ++ ++ K+ G
Sbjct: 901 LLCKGKRVRDA-EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRI-KETGL 958
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQY---E 456
D TY L+ M CR+RR E L++QM P D+Y SLI + G+Q +
Sbjct: 959 EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLI---SAFGKQKCLEQ 1015
Query: 457 AVMWLEDMISQG 468
A E+++S+G
Sbjct: 1016 AEQLFEELLSKG 1027
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 131/287 (45%), Gaps = 10/287 (3%)
Query: 189 YAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEE--AIE 246
Y +M G+ +A L+ +M Q+G D++ + TL++A + G A+E
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAM----RQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
+L + GL+ YN L LS CS +++G ++ + P L +YNAM + +
Sbjct: 284 LLDMVRNSGLRPDAITYNTL-LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAM-ISV 341
Query: 307 YSESKID-EADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLP 365
Y + EA+++ +E++ +GF P + + + A + R E +K + + M +
Sbjct: 342 YGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFAR-ERNTEKVKEVYQQMQKMGFGK 400
Query: 366 NSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQL 425
+ YN ++ G L+ M G D TY +L++ L + R +EA+ L
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 426 LEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
+ +M P +Y++LI G G++ EA M+ G P+
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 197/477 (41%), Gaps = 34/477 (7%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
A+ IF A+ P VY M+ + SG+ + +++++ MRQ C F +
Sbjct: 210 AVEIFTRAE---PTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTL 266
Query: 87 INIYANAGLVDE--AITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD---N 141
IN +G + A+ L + ++NTLL + L+ A +F D +
Sbjct: 267 INARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAH 326
Query: 142 SCG---WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
C W + + +Y CG A ++F E++ +G +P+ +Y L+
Sbjct: 327 RCQPDLWTYNAMIS-----VYGRCGLAAE--AERLFMELELKGFFPDAVTYNSLLYAFAR 379
Query: 199 DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA 258
+ T + ++ ++ + G G+D + Y T++ + G+ + A+++ + KGL
Sbjct: 380 E----RNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM--KGLSG 433
Query: 259 PKR---CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEA 315
Y L S R +E L+ E L G P+L +Y+A+ K +EA
Sbjct: 434 RNPDAITYTVLIDSLGKANRTVEAAA-LMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Query: 316 DKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLK 375
+ M G KP + + L + + +A + DM++ P+ +Y +++
Sbjct: 493 EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLY-RDMISDGHTPSYTLYELMIL 551
Query: 376 NLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYW 435
L S + +++ M + G E +L++ C + L A QL ++ Y
Sbjct: 552 GLMKENRSDDIQKTIRDMEELCGMNP-LEISSVLVKGECFD---LAARQLKVAIT-NGYE 606
Query: 436 PCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKAS 492
D+ S++ S GR EA LE + + + ++L L C + + A+
Sbjct: 607 LENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAA 663
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 141/324 (43%), Gaps = 13/324 (4%)
Query: 24 PMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVF 83
P A + N+A+++ + + P+Y +I G + V+ +RQ +
Sbjct: 732 PETAHQVVNQAETKGFHFACS-PMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTW 790
Query: 84 ASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSC 143
S ++ YA G + A +F + + +S N LL + + RLE + + V+
Sbjct: 791 NSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELY-VVVEELQ 849
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH 203
K ++ L++ A G +I+ M G P Y ++++ LC R+
Sbjct: 850 DMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVR 909
Query: 204 EATHLLYSMFWRISQKGNGE-DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC 262
+A ++ M ++ N + ++ ++ ++L +++ +++ +I GL+ +
Sbjct: 910 DAEIMVSEM-----EEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETT 964
Query: 263 YNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM 322
YN L + C D R EG L+ + G P L +Y ++ + +++A+++ E+
Sbjct: 965 YNTLIIMYCRDRRPEEGY-LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
Query: 323 QDRGFKPTRAIFEAKVAALCKVSR 346
+G K R+ + + K+SR
Sbjct: 1024 LSKGLKLDRSFYH----TMMKISR 1043
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 120/279 (43%), Gaps = 10/279 (3%)
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
+Y TLL + + EA ++ S + G +A + + + C G E ++++
Sbjct: 682 TMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFP-ETAHQVVN 740
Query: 286 EALIKGSVPSLSSYNAMAVDLYSESKI-DEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
+A KG + S ++ Y + K+ +A+ V+ ++ G P + + ++A +
Sbjct: 741 QAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC 800
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSA---AVLESLNKMSKKVGCTA 401
+ A + I M+ P E NILL L G V+E L M K+
Sbjct: 801 GCYERA-RAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKIS--- 856
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
+ + +++L+ R E ++ M Y P Y +I+ LC R +A + +
Sbjct: 857 -KSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMV 915
Query: 462 EDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+M E+++W S+ ++ +E K + +++ R++
Sbjct: 916 SEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 192/467 (41%), Gaps = 86/467 (18%)
Query: 9 LTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVI 68
LT + +++ ++ K +I ++ + + + +Y ++ +LG R E V
Sbjct: 107 LTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVF 166
Query: 69 EQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSE 128
++M + + + +N YA A VDEA+ +F+ +F + +F+ LL +
Sbjct: 167 DEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRY 226
Query: 129 DRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDS 188
+E A LF C + R GC + +
Sbjct: 227 KHVEFAETLF-----------------------CSRRRE------------FGC--DIKA 249
Query: 189 YAILMKGLCHDGRLHEATHLLYSMFWR--ISQKGNGEDIVVYRTLLDALCEDGKFEEAIE 246
+++ G C G +HEA FW+ I+ K D+V Y T+++AL + GK +A+E
Sbjct: 250 MNMILNGWCVLGNVHEAKR-----FWKDIIASKCR-PDVVSYGTMINALTKKGKLGKAME 303
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
+ R + T+R P + N + L
Sbjct: 304 LY--------------------------RAMWDTRR----------NPDVKICNNVIDAL 327
Query: 307 YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE-DMVAVNCLP 365
+ +I EA +V E+ ++G P + + + LCK+ R ++ +++EE ++ +C P
Sbjct: 328 CFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSP 387
Query: 366 NSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQL 425
N ++ LLK + + VLE + K C + Y ++ + + + + ++
Sbjct: 388 NDVTFSYLLKYSQRSKDVDIVLERMAKNK----CEMTSDLYNLMFRLYVQWDKEEKVREI 443
Query: 426 LEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
+M P +Y I GL + G+ EA+ + ++M+S+G +PE
Sbjct: 444 WSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 9/250 (3%)
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
+K+ V ++ LC G A +F EM +G +PN +Y ++ CH GR +A
Sbjct: 5 HIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDA 64
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR 265
LL M +K DIV + L++A ++ K EA EI ++LR + YN
Sbjct: 65 DQLLRHMI----EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 266 LDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDR 325
+ C R ++ KR++ KG P + +++ + ++D ++ EM R
Sbjct: 121 MIDGFCKQDR-VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 326 GFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL---RNVGN 382
G + + C+V +D A ++ E M++ P+ ++ +L L + +
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNE-MISCGVAPDYITFHCMLAGLCSKKELRK 238
Query: 383 SAAVLESLNK 392
+ A+LE L K
Sbjct: 239 AFAILEDLQK 248
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 118/278 (42%), Gaps = 40/278 (14%)
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
D+V+ ++D LC+DG A + +++ KG+ YN + S C GR + + L
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 284 IHEALIKGSV-PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
H +I+ + P + +++A+ E K+ EA+++ EM PT + + + C
Sbjct: 69 RH--MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTAD 402
K RVD+A ++ L+ M+ K GC+ D
Sbjct: 127 KQDRVDDAKRM------------------------------------LDSMASK-GCSPD 149
Query: 403 RETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLE 462
T+ L+ C+ +R ++ +M + +Y +LI G C +G A L
Sbjct: 150 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 209
Query: 463 DMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+MIS G P+ + + + C+ + ++ + I L+
Sbjct: 210 EMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 38/231 (16%)
Query: 271 CSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
C DG I + L E KG P++ +YN M + +AD+++ M ++ P
Sbjct: 21 CKDGNHINA-QNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 331 RAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESL 390
F A + A K +V EA ++ +E M+ + P + YN ++
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKE-MLRWSIFPTTITYNSMIDGF------------- 125
Query: 391 NKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCS 450
C++ R +A ++L+ M+ K P ++++LI G C
Sbjct: 126 -----------------------CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 162
Query: 451 LGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
R + +M +G + + +L FC + + A+ ++ N + S
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 213
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 95/239 (39%), Gaps = 47/239 (19%)
Query: 23 NPMKALHIFNE--AKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKD 80
N + A ++F E K +P N Y MI SGR + ++ M +
Sbjct: 25 NHINAQNLFTEMHEKGIFP----NVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDI 80
Query: 81 TVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD 140
F++ IN + V EA ++K + +++ T ++N+++
Sbjct: 81 VTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMID----------------- 123
Query: 141 NSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDG 200
C + R D A ++ M +GC P+ +++ L+ G C
Sbjct: 124 -------------------GFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK 164
Query: 201 RLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAP 259
R+ + F + ++G + V Y TL+ C+ G + A ++L++++ G+ AP
Sbjct: 165 RVDNGMEI----FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV-AP 218
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 130/309 (42%), Gaps = 52/309 (16%)
Query: 4 RWPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGE 63
+ P TP L+ I +++P H+FN A S+ P++TH Y I LG + E
Sbjct: 132 KLPPRFTPEELADAITLEEDPFLCFHLFNWA-SQQPRFTHENCSYHIAIRKLGAAKMYQE 190
Query: 64 MRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI---PQFNCVNWTQSFNT 120
M D++ Q+ + ++ S I + AG + A+ +F+++ C ++++
Sbjct: 191 MDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHI 250
Query: 121 LLQIMVSEDR--------LEAAHGLF---VDNSCGWEVKSRVHALNLLMYALCGKGRSDL 169
L + ++ +E LF VD+ ++ V ALN L+ +
Sbjct: 251 LFKALLGRGNNSYINHVYMETVRSLFRQMVDSG----IEPDVFALNCLVKGYVLSLHVND 306
Query: 170 ALQIFQEMD-YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM---------------- 212
AL+IF +M C PN +Y L+ GLC GR A LL M
Sbjct: 307 ALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLV 366
Query: 213 ---------------FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
W + + G D + YRTL+D C GK++EA +L ++LR+
Sbjct: 367 NAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL-EMLREKQL 425
Query: 258 APKRCYNRL 266
+ Y++L
Sbjct: 426 VDRDSYDKL 434
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 354 IEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEML 413
IE D+ A+NCL V ++ + + L ++MS C + TY L+ L
Sbjct: 284 IEPDVFALNCLVKGYVLSLHVND---------ALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 414 CRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEI 473
C + R + A +LL +M K + P SYNSL+ G +AV L +MI G++ +
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 474 SVWKSLASLFCNLEMMKASSEIFNRLR 500
+++L C ++ + LR
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLR 421
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/506 (20%), Positives = 200/506 (39%), Gaps = 76/506 (15%)
Query: 59 GRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSF 118
G E DV+ Q ++ C +N G + +TLFK + Q ++
Sbjct: 160 GMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTY 219
Query: 119 NTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMD 178
+++ + + LE A L ++N + K+ ++ L C G ++ A+ + E+
Sbjct: 220 AIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGL-------CVTGETEKAVALILELI 272
Query: 179 YQGCYPNRDSYAIL---MKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDAL 235
+ D A+L ++G C++ ++ A ++ M + G G D+ ++D
Sbjct: 273 DRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEM----EEIGFGLDVYACLAVIDRY 328
Query: 236 CEDGKFEEAIEILSKILRKGLKAP-------KRCYNRLD-----LSQCSDGRD------- 276
C++ EA+ L K+L KGLK +CY ++D L + + RD
Sbjct: 329 CKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDR 388
Query: 277 ---------------IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
+E L+ E +G VP + +Y + + K+ +A +I E
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL---R 378
M G P + V+ L + +E +++ E M A PN+ +++++ L R
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYER-MKAEGPKPNAVTNSVIIEGLCFAR 507
Query: 379 NVGNSAAVLESL------NKMSKKVG-CTAD-----------------RETYIILLEMLC 414
V + SL NK S G C A + YI L LC
Sbjct: 508 KVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLC 567
Query: 415 RERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEIS 474
E +A +L++MS P +I C L EA + + M+ +G +P++
Sbjct: 568 IEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLF 627
Query: 475 VWKSLASLFCNLEMMKASSEIFNRLR 500
+ + +C L ++ + +F ++
Sbjct: 628 TYTIMIHTYCRLNELQKAESLFEDMK 653
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 203/509 (39%), Gaps = 115/509 (22%)
Query: 20 TQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSG-----------------RLG 62
T+ +P AL + K + N YAT++ IL T G R
Sbjct: 66 TRDDPNLALSFLRQLKEH--GVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGF 123
Query: 63 EMRDVIEQMRQDSCECKDT-----VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQS 117
+ D+IE + + + E K + V + + Y + G+ DEA + + +CV
Sbjct: 124 TVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCV----- 178
Query: 118 FNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
VD + A N LM + G+ + + +F+++
Sbjct: 179 ---------------------VD----------IKACNFLMNRMTEFGKIGMLMTLFKQL 207
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
G N +YAI++K LC G L EA LL E + Y+T ++ LC
Sbjct: 208 KQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE----------NESVFGYKTFINGLCV 257
Query: 238 DGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLS 297
G+ E+A+ ++ +++ + A G D+ R + +++G
Sbjct: 258 TGETEKAVALILELIDRKYLA---------------GDDL----RAVLGMVVRG------ 292
Query: 298 SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEED 357
+E K+ A+ VI+EM++ GF A + CK + EA+ +++
Sbjct: 293 --------FCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKM 344
Query: 358 M---VAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS--KKVGCTADRETYIILLEM 412
+ + VNC+ S + K LE+L K + + DR Y + +
Sbjct: 345 LGKGLKVNCVIVSLILQCYCK-------MDMCLEALEKFKEFRDMNIFLDRVCYNVAFDA 397
Query: 413 LCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
L + R EA +LL++M + P +Y +LI G C G+ +A+ +++MI G P+
Sbjct: 398 LSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPD 457
Query: 473 ISVWKSLASLFCNLEMMKASSEIFNRLRS 501
+ + L S + EI+ R+++
Sbjct: 458 LITYNVLVSGLARNGHEEEVLEIYERMKA 486
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 147/388 (37%), Gaps = 87/388 (22%)
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
N+ AL GR + A ++ QEM +G P+ +Y L+ G C G++ +A L+ M
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI- 450
Query: 215 RISQKGNG--EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS 272
GNG D++ Y L+ L +G EE +EI ++ +G K P N + +
Sbjct: 451 -----GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK-PNAVTNSVIIEGLC 504
Query: 273 DGRDIE---------------------------GTKRLIHEALIKGSVP-SLSSYNAMAV 304
R ++ G + ++A ++ P S Y +
Sbjct: 505 FARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFF 564
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
L E +++A V+ +M +P R++ + A CK++ V EA +V+ + MV +
Sbjct: 565 SLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREA-QVLFDTMVERGLI 623
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
P D TY I++ CR +A
Sbjct: 624 P------------------------------------DLFTYTIMIHTYCRLNELQKAES 647
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF- 483
L E M + P +Y L+ L ++ ++ + + K E+ S A +
Sbjct: 648 LFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGL 707
Query: 484 ------------CNLEMMKASSEIFNRL 499
C + ++ ++E+F+R+
Sbjct: 708 DVVCYTVLIDRQCKMNNLEQAAELFDRM 735
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 171/415 (41%), Gaps = 49/415 (11%)
Query: 11 PTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQ 70
P + +++++Q N + +L F S Y YT GPV ++ G+ ++
Sbjct: 80 PLFFGELLKSQNNVLFSLWFFRWLCSNY-DYTP-GPVSLNILFGALLDGK--AVKAAKSF 135
Query: 71 MRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSE-- 128
+ + + T+ + + GLV+EAI ++ + + + N++L +
Sbjct: 136 LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARK 195
Query: 129 -DRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRD 187
DR H V++ E + L+ ALC G ++ ++ QG P +
Sbjct: 196 LDRFWELHKEMVESEFDSE------RIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQY 249
Query: 188 SYAILMKGLCHDGR---LHEATHLL----------------------------YSMFWRI 216
YA L+ G C G + E H + Y +F +
Sbjct: 250 VYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNL 309
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
KG D VVY T++ CE G A ++ ++++KG++ + YN + G +
Sbjct: 310 KDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRG-E 368
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
I + +E L G ++ S N M S K DEA ++ M + G P + A
Sbjct: 369 ISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNA 428
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLN 391
+ CK ++V++ +K+ +E + A+ P+ Y L++NL+ S +V SLN
Sbjct: 429 LIKGFCKENKVEKGLKLYKE-LKALGLKPSGMAYAALVRNLK---MSDSVATSLN 479
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 118/269 (43%), Gaps = 6/269 (2%)
Query: 229 RTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
R L+ ALC+ G E E+L + L++GL + Y +L C G + ++H +
Sbjct: 217 RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIG-NYACMSEVLHTMI 275
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
PS+ Y + L K EA + ++D+G+ P R ++ + C+ +
Sbjct: 276 AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
A K+ E M+ PN YN+++ G + V N+M + G +
Sbjct: 336 SARKLWFE-MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN-GYGGTMLSCNT 393
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
+++ C + EA ++ + MS P A +YN+LIKG C + + + +++ + G
Sbjct: 394 MIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALG 453
Query: 469 KLPEISVWKSLASLFCNLEMMKASSEIFN 497
P + A+L NL+M + + N
Sbjct: 454 LKPSGMAY---AALVRNLKMSDSVATSLN 479
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 326 GFKPTRAIFEAKVAALCKVSRVDEAIKV--IEEDM-----------VAVNCLP------- 365
GFKP + E V L + V+EAI+V + +DM V + CL
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 366 ------------NSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEML 413
+SE L++ L + G+ + E L K K G + Y L+
Sbjct: 200 WELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELL-KQGLKQGLDPGQYVYAKLISGF 258
Query: 414 CRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEI 473
C Y S++L M +++P Y +IKGLC +Q EA +++ +G P+
Sbjct: 259 CEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDR 318
Query: 474 SVWKSLASLFC 484
V+ ++ FC
Sbjct: 319 VVYTTMIRGFC 329
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 162/378 (42%), Gaps = 36/378 (9%)
Query: 3 IRWPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLG 62
I +P TP+++S + +P AL F++ SR P + HN YA+++++L +
Sbjct: 20 ISYP-FYTPSHVSSLFSLNLDPQTALS-FSDWISRIPNFKHNVTSYASLVTLLCSQEIPY 77
Query: 63 EMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI---------TLFKNIPQFNCVN 113
E+ + M + +D +F G E L ++ +F V
Sbjct: 78 EVPKITILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVE 137
Query: 114 WTQSFNT-LLQIMVSEDRLEAAHGLFVDNSC--GWEVKSRVHALNLL------------- 157
+ T +L+ +VS D V+ C G+ V+++ + L+
Sbjct: 138 EMKRLYTEMLEDLVSPDIY--TFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTS 195
Query: 158 -MYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
+ C + D A ++F+EM GC+ N SY L+ GL ++ EA LL M
Sbjct: 196 FITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKM---- 251
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
++ Y L+DALC G+ EA+ + ++ G+K Y L S CS G
Sbjct: 252 KDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCS-GDT 310
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
++ L+ L G +P++ +YNA+ + + + + +A ++ +M ++ P +
Sbjct: 311 LDEASGLLEHMLENGLMPNVITYNAL-IKGFCKKNVHKAMGLLSKMLEQNLVPDLITYNT 369
Query: 337 KVAALCKVSRVDEAIKVI 354
+A C +D A +++
Sbjct: 370 LIAGQCSSGNLDSAYRLL 387
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 123/295 (41%), Gaps = 13/295 (4%)
Query: 40 KYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEA 99
KY Y ++S L G + EM+ + +M +D F + +N Y G V EA
Sbjct: 115 KYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEA 174
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSCGWEVKSRVHALNL 156
+ Q C ++ + + ++AA +F N C S
Sbjct: 175 KQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQ---- 230
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
L+Y L + D AL + +M C PN +Y +L+ LC G+ EA +L F ++
Sbjct: 231 LIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNL----FKQM 286
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
S+ G D +Y L+ + C +EA +L +L GL YN L C ++
Sbjct: 287 SESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK--KN 344
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTR 331
+ L+ + L + VP L +YN + S +D A +++ M++ G P +
Sbjct: 345 VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQ 399
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 102/248 (41%), Gaps = 9/248 (3%)
Query: 250 KILRKG------LKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMA 303
+ +RKG K +CYN L LS + +E KRL E L P + ++N +
Sbjct: 104 RTMRKGDSFEIKYKLTPKCYNNL-LSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLV 162
Query: 304 VDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
+ EA + + + G P + + + C+ VD A KV +E M C
Sbjct: 163 NGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKE-MTQNGC 221
Query: 364 LPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
N Y L+ L L L KM K C + TY +L++ LC + EA
Sbjct: 222 HRNEVSYTQLIYGLFEAKKIDEALSLLVKM-KDDNCCPNVRTYTVLIDALCGSGQKSEAM 280
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
L +QMS P Y LI+ CS EA LE M+ G +P + + +L F
Sbjct: 281 NLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF 340
Query: 484 CNLEMMKA 491
C + KA
Sbjct: 341 CKKNVHKA 348
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 26/341 (7%)
Query: 143 CGWEVKSRVHALNLLMYALCGKGRSDLALQIF---------QEMDYQ---GCYPNRDSYA 190
C E+ V + +LM C R L + F E+ Y+ CY N
Sbjct: 71 CSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNN----- 125
Query: 191 ILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSK 250
L+ L G + E L M + DI + TL++ C+ G EA + ++
Sbjct: 126 -LLSSLARFGLVEEMKRLYTEMLEDLV----SPDIYTFNTLVNGYCKLGYVVEAKQYVTW 180
Query: 251 ILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSES 310
+++ G Y C ++++ ++ E G + SY + L+
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRR-KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAK 239
Query: 311 KIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVY 370
KIDEA ++V+M+D P + + ALC + EA+ + ++ M P+ +Y
Sbjct: 240 KIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ-MSESGIKPDDCMY 298
Query: 371 NILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMS 430
+L+++ + G++ L + + G + TY L++ C++ + +A LL +M
Sbjct: 299 TVLIQSFCS-GDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVH-KAMGLLSKML 356
Query: 431 IKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLP 471
++ P +YN+LI G CS G A L M G +P
Sbjct: 357 EQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVP 397
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 97/249 (38%), Gaps = 39/249 (15%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+ T+++ G + E + + + Q C+ + S I + VD A +FK +
Sbjct: 157 TFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEM 216
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFV----DNSCGWEVKSRVHALNLLMYALC 162
Q C S+ L+ + +++ A L V DN C V +L+ ALC
Sbjct: 217 TQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCC-----PNVRTYTVLIDALC 271
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMF--------- 213
G G+ A+ +F++M G P+ Y +L++ C L EA+ LL M
Sbjct: 272 GSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVI 331
Query: 214 ---------------------WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKIL 252
++ ++ D++ Y TL+ C G + A +LS +
Sbjct: 332 TYNALIKGFCKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLME 391
Query: 253 RKGLKAPKR 261
GL +R
Sbjct: 392 ESGLVPNQR 400
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 2/201 (0%)
Query: 299 YNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDM 358
YN + L ++E ++ EM + P F V CK+ V EA + + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTW-L 181
Query: 359 VAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERR 418
+ C P+ Y + A + +M++ GC + +Y L+ L ++
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQN-GCHRNEVSYTQLIYGLFEAKK 240
Query: 419 YLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKS 478
EA LL +M + P +Y LI LC G++ EA+ + M G P+ ++
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTV 300
Query: 479 LASLFCNLEMMKASSEIFNRL 499
L FC+ + + +S + +
Sbjct: 301 LIQSFCSGDTLDEASGLLEHM 321
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 139/329 (42%), Gaps = 45/329 (13%)
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
+ + ++A N+L+ ALC G + + M ++ P+ +++ +L G C +A
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKA 287
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKG--LKAPKRCY 263
LL M + G+ + Y +D C+ G +EA ++ ++ KG + AP
Sbjct: 288 MKLLEEMI----EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKT 343
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
L + + E LI + G +P +S+Y + + K+DEA K + EM
Sbjct: 344 FALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMS 403
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
++G+ P + + LC+ + DEA+K+ MV C P+ + YN+L+ + +
Sbjct: 404 NKGYPPDIVTYNCFLRVLCENRKTDEALKLYGR-MVESRCAPSVQTYNMLISMFFEMDDP 462
Query: 384 AAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS 443
+ +M K+ C D ETY CA
Sbjct: 463 DGAFNTWTEMDKR-DCVQDVETY------------------------------CA----- 486
Query: 444 LIKGLCSLGRQYEAVMWLEDMISQG-KLP 471
+I GL R EA LE+++++G KLP
Sbjct: 487 MINGLFDCHRAKEACFLLEEVVNKGLKLP 515
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 168/457 (36%), Gaps = 65/457 (14%)
Query: 10 TPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILG-TSGRLGEMRDVI 68
TP + R Q A F A + Y+H Y MI IL T + + R VI
Sbjct: 125 TPVVCKILQRLQYEEKTAFRFFTWAGHQ-EHYSHEPIAYNEMIDILSSTKYKNKQFRIVI 183
Query: 69 EQM----RQDSCECKDTVFASAINIYANAGLVD------EAITLFKNIPQFNCVNWTQSF 118
+ + R + V + Y L K P+ N +F
Sbjct: 184 DMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEIN------AF 237
Query: 119 NTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMD 178
N LL + ++ L VK + N+L + C A+++ +EM
Sbjct: 238 NMLLDALCKCGLVKEGEALL--RRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMI 295
Query: 179 YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRT---LLDAL 235
G P +Y + C G + EA L M KG+ +T ++ AL
Sbjct: 296 EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMI----TKGSAVSAPTAKTFALMIVAL 351
Query: 236 CEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPS 295
++ K EE E++ +++ G +P
Sbjct: 352 AKNDKAEECFELIGRMIS------------------------------------TGCLPD 375
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
+S+Y + + K+DEA K + EM ++G+ P + + LC+ + DEA+K+
Sbjct: 376 VSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYG 435
Query: 356 EDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCR 415
MV C P+ + YN+L+ + + + +M K+ C D ETY ++ L
Sbjct: 436 R-MVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKR-DCVQDVETYCAMINGLFD 493
Query: 416 ERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLG 452
R EA LLE++ K ++S + L +G
Sbjct: 494 CHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVG 530
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 39/292 (13%)
Query: 67 VIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
++E+M + + ++ + +AI+ + AG+VDEA LF M+
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLF-------------------DFMI 330
Query: 127 SEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNR 186
++ +A L++ AL +++ ++ M GC P+
Sbjct: 331 TKGSAVSA--------------PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDV 376
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIE 246
+Y +++G+C ++ EA Y +S KG DIV Y L LCE+ K +EA++
Sbjct: 377 STYKDVIEGMCMAEKVDEA----YKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALK 432
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
+ +++ + YN L +S + D +G E + V + +Y AM L
Sbjct: 433 LYGRMVESRCAPSVQTYNML-ISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGL 491
Query: 307 YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDM 358
+ + EA ++ E+ ++G K +F++ + L +V + +AI + E M
Sbjct: 492 FDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNL-KAIHKVSEHM 542
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 18/279 (6%)
Query: 219 KGNGEDIVVYRTLLDAL---CEDGKFEEAIEILSKILRKGLKAPKR--CYNRLDLSQCSD 273
K N + +V+ LL+ L CE ++ ++ +K R +K +N L + C
Sbjct: 190 KRNNKTVVLVDVLLEILRKYCE--RYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKC 247
Query: 274 GRDIEGT---KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
G EG +R+ H P +++N + +A K++ EM + G KP
Sbjct: 248 GLVKEGEALLRRMRHRV-----KPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPE 302
Query: 331 RAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL--PNSEVYNILLKNLRNVGNSAAVLE 388
+ A + C+ VDEA + + + + + P ++ + +++ L + E
Sbjct: 303 NFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFE 362
Query: 389 SLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGL 448
+ +M GC D TY ++E +C + EA + L++MS K Y P +YN ++ L
Sbjct: 363 LIGRMIS-TGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVL 421
Query: 449 CSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLE 487
C + EA+ M+ P + + L S+F ++
Sbjct: 422 CENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMD 460
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 88/208 (42%), Gaps = 4/208 (1%)
Query: 294 PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV 353
P ++++N + L + E + ++ M+ R KP F C+V +A+K+
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 354 IEEDMVAVNCLPNSEVYNILLKNLRNVG--NSAAVLESLNKMSKKVGCTADRETYIILLE 411
+EE M+ P + Y + G + AA L +T+ +++
Sbjct: 291 LEE-MIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 412 MLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLP 471
L + + E +L+ +M P +Y +I+G+C + EA +L++M ++G P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 472 EISVWKSLASLFCNLEMMKASSEIFNRL 499
+I + + C + +++ R+
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRM 437
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 193/457 (42%), Gaps = 25/457 (5%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+Y T+I + G L ++ M Q + + + IN AG V EA + K +
Sbjct: 349 LYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGV 408
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL---FVDNSCGWEVKSRVHALNLLMYALCG 163
V +++TLL + ++A + F++ ++ + N+L+ A
Sbjct: 409 -----VGDVITYSTLLDSYIKVQNIDAVLEIRRRFLE----AKIPMDLVMCNILLKAFLL 459
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
G A +++ M P+ +YA ++KG C G++ EA + + +K +
Sbjct: 460 MGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL-----RKSSVS 514
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
V Y ++DALC+ G + A E+L ++ KGL L S ++G D +G L
Sbjct: 515 AAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGD-KGILGL 573
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT--RAIFEAKVAAL 341
++ S L N + L + A +V + M+ +G T I + V L
Sbjct: 574 VYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNL 633
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
+ + E + +++ + Y I++ L G L +L +K G T
Sbjct: 634 RSLDAYLLVVNAGETTLSSMDVID----YTIIINGLCKEGFLVKAL-NLCSFAKSRGVTL 688
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
+ TY L+ LC++ +EA +L + + P +Y LI LC G +A L
Sbjct: 689 NTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLL 748
Query: 462 EDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNR 498
+ M+S+G +P I ++ S+ +C L + + + +R
Sbjct: 749 DSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSR 785
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 183/456 (40%), Gaps = 85/456 (18%)
Query: 24 PMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVF 83
P AL F E+ N Y T++S L G++ E+RD++ ++ + E +
Sbjct: 187 PELALGFF-ESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFY 245
Query: 84 ASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSC 143
++ I+ Y G + +A+ +DR G+ D
Sbjct: 246 SNWIHGYFKGGALVDALM--------------------------QDREMVEKGMNRD--- 276
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH 203
V + ++L+ L +G + AL + +M +G PN +Y +++GLC G+L
Sbjct: 277 -------VVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
Query: 204 EATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
EA + +F RI G D +Y TL+D +C G A +L + ++G++ Y
Sbjct: 330 EA----FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
N + C GR E + + KG V + +Y+ + L S K+ D V+
Sbjct: 386 NTVINGLCMAGRVSEA------DEVSKGVVGDVITYSTL---LDSYIKVQNIDAVL---- 432
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
+ R EAK+ M V C NILLK +G
Sbjct: 433 ----EIRRRFLEAKIP------------------MDLVMC-------NILLKAFLLMGAY 463
Query: 384 AAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS 443
++L + ++ T D TY +++ C+ + EA ++ ++ KS A YN
Sbjct: 464 GEA-DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR-KSSVSAAVCYNR 521
Query: 444 LIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
+I LC G A L ++ +G +I ++L
Sbjct: 522 IIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTL 557
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/456 (20%), Positives = 186/456 (40%), Gaps = 60/456 (13%)
Query: 59 GRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSF 118
G GE + M + +A+ I Y G ++EA+ +F + + + V+ +
Sbjct: 461 GAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK-SSVSAAVCY 519
Query: 119 NTLLQIMVSEDRLEAA---------HGLFVDNSCGWEVKSRVHA---------------- 153
N ++ + + L+ A GL++D + +HA
Sbjct: 520 NRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQ 579
Query: 154 ---------LNLLMYALCGKGRSDLALQIFQEMDYQG---CYPNRDSYAILMKGLCHDGR 201
LN + LC +G + A++++ M +G +P + ++K L + R
Sbjct: 580 LNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFP-----STILKTLVDNLR 634
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
+A L+ + + D++ Y +++ LC++G +A+ + S +G+
Sbjct: 635 SLDAYLLVVNAG---ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTI 691
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
YN L C G +E RL G VPS +Y + +L E +A+K++
Sbjct: 692 TYNSLINGLCQQGCLVEAL-RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDS 750
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
M +G P I+ + V CK+ + ++A++V+ M+ P++ + ++K G
Sbjct: 751 MVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMG-RVTPDAFTVSSMIKGYCKKG 809
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQM-----------S 430
+ L + K +AD ++ L++ C + R EA LL +M
Sbjct: 810 DMEEALSVFTEFKDK-NISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINR 868
Query: 431 IKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMIS 466
+ + ++S + LC GR +A+ L+++ S
Sbjct: 869 VDAELAESESIRGFLVELCEQGRVPQAIKILDEISS 904
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 144/345 (41%), Gaps = 48/345 (13%)
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSY--AILMKGLCHDGRLHEATHLLYSMFW 214
L+Y KG D A+++ + M + D++ + ++ G C G+ A S
Sbjct: 140 LIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFES--- 196
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
+ ++V Y TL+ ALC+ GK +E +++ ++ +G + Y+ G
Sbjct: 197 AVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGG 256
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
++ + E + KG + SY+ + L E ++EA ++ +M G +P +
Sbjct: 257 ALVDALMQ-DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITY 315
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
A + LCK+ +++EA + +N +L
Sbjct: 316 TAIIRGLCKMGKLEEAFVL----------------FNRILS------------------- 340
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
VG D Y+ L++ +CR+ A +L M + P +YN++I GLC GR
Sbjct: 341 --VGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRV 398
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
EA D +S+G + ++ + +L + ++ + A EI R
Sbjct: 399 SEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRF 438
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 142/373 (38%), Gaps = 75/373 (20%)
Query: 160 ALCGKGRSDLALQIFQE-MDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM------ 212
C G+ +LAL F+ +D PN +Y L+ LC G++ E L+ +
Sbjct: 180 GFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFE 239
Query: 213 ----FW---------------------RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEI 247
F+ + +KG D+V Y L+D L ++G EEA+ +
Sbjct: 240 FDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGL 299
Query: 248 LSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLY 307
L K++++G++ Y + C G+ +E L + L G Y + +
Sbjct: 300 LGKMIKEGVEPNLITYTAIIRGLCKMGK-LEEAFVLFNRILSVGIEVDEFLYVTLIDGIC 358
Query: 308 SESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNS 367
+ ++ A ++ +M+ RG +P+ + + LC RV EA D V+ + +
Sbjct: 359 RKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA------DEVSKGVVGDV 412
Query: 368 EVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLE 427
Y+ LL + V N AVLE + + + D ILL+ Y EA L
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLE-IRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 428 QMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLE 487
M P +Y ++IKG C G+ EA+
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEAL----------------------------- 502
Query: 488 MMKASSEIFNRLR 500
E+FN LR
Sbjct: 503 ------EMFNELR 509
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 16/237 (6%)
Query: 25 MKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFA 84
+KAL++ + AKSR T N Y ++I+ L G L E + + + + +
Sbjct: 672 VKALNLCSFAKSR--GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYG 729
Query: 85 SAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCG 144
I+ GL +A L ++ V +N+++ + E A + G
Sbjct: 730 ILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMG 789
Query: 145 WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHE 204
V ++ ++ C KG + AL +F E + + + L+KG C GR+ E
Sbjct: 790 -RVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEE 848
Query: 205 ATHLLYSMFWRIS----------QKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKI 251
A LL M S + E I R L LCE G+ +AI+IL +I
Sbjct: 849 ARGLLREMLVSESVVKLINRVDAELAESESI---RGFLVELCEQGRVPQAIKILDEI 902
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 156/363 (42%), Gaps = 49/363 (13%)
Query: 15 SQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQD 74
+Q+++ N AL F K R P + H+G Y TM+ LG + + GE+ ++++M +D
Sbjct: 330 NQVLKQMDNYANALGFFYWLK-RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRD 388
Query: 75 SCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAA 134
C+ + I+ Y A + EA+ +F + + C ++ TL+ I
Sbjct: 389 GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDI---------- 438
Query: 135 HGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMK 194
HA G D+A+ ++Q M G P+ +Y++++
Sbjct: 439 -----------------HA---------KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 195 GLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRK 254
L G L A + +F + +G ++V + ++ + +E A+++ +
Sbjct: 473 CLGKAGHLPAA----HRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 255 GLKAPKRCYNRL--DLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSES-K 311
G + K Y+ + L C + EG + E K VP Y + VDL+ ++
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEG---VFAEMQRKNWVPDEPVY-GLLVDLWGKAGN 584
Query: 312 IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
+D+A + M G +P + ++ +V R+ EA +++ M+A+ P+ + Y
Sbjct: 585 VDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQS-MLALGLHPSLQTYT 643
Query: 372 ILL 374
+LL
Sbjct: 644 LLL 646
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 9/275 (3%)
Query: 172 QIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTL 231
++ EM GC PN +Y L+ L EA ++ F ++ + G D V Y TL
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNV----FNQMQEAGCEPDRVTYCTL 435
Query: 232 LDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG 291
+D + G + A+++ ++ GL Y+ + ++ + RL E + +G
Sbjct: 436 IDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI-INCLGKAGHLPAAHRLFCEMVGQG 494
Query: 292 SVPSLSSYNAMAVDLYSESK-IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
P+L ++N M + L+++++ + A K+ +MQ+ GF+P + + + L ++EA
Sbjct: 495 CTPNLVTFNIM-IALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553
Query: 351 IKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILL 410
V E M N +P+ VY +L+ GN + M + G + T LL
Sbjct: 554 EGVFAE-MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM-LQAGLRPNVPTCNSLL 611
Query: 411 EMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
R R EA LL+ M P +Y L+
Sbjct: 612 STFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 119/326 (36%), Gaps = 76/326 (23%)
Query: 212 MFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQC 271
+W Q G D Y T++ L +F E ++L +++R G K YNR
Sbjct: 346 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNR------ 399
Query: 272 SDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTR 331
LIH SY + + EA V +MQ+ G +P R
Sbjct: 400 -----------LIH------------SYG-------RANYLKEAMNVFNQMQEAGCEPDR 429
Query: 332 AIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLN 391
+ + K +D A+ + + M P++ Y++++ L G+ A
Sbjct: 430 VTYCTLIDIHAKAGFLDIAMDMYQR-MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFC 488
Query: 392 KMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIK--GLC 449
+M + GCT + T+ I++ + + R Y A +L M + P +Y+ +++ G C
Sbjct: 489 EMVGQ-GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 547
Query: 450 SLGRQYEAVM---------------------------------WLEDMISQGKLPEISVW 476
+ E V W + M+ G P +
Sbjct: 548 GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTC 607
Query: 477 KSLASLFCNLEMMKASSEIFNRLRSL 502
SL S F + M SE +N L+S+
Sbjct: 608 NSLLSTFLRVHRM---SEAYNLLQSM 630
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 151/346 (43%), Gaps = 44/346 (12%)
Query: 17 IIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSC 76
+++++K+P + L I A S P + ++ + L + ++++ ++
Sbjct: 53 LLKSEKDPDRILEICR-AASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRP 111
Query: 77 ECKDTVFAS-AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLL-QIMVSEDRLEAA 134
+ K FA+ AI +YA A ++D ++ +F+++ +F +S N LL +V++D EA
Sbjct: 112 DLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAK 171
Query: 135 HGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMK 194
++++ + ++ + N ++ C G + + I EM+ +G PN S+ +++
Sbjct: 172 R-VYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMIS 230
Query: 195 G-----------------------------------LCHDGRLHEATHLLYSMFWRISQK 219
G LC + EA LL M
Sbjct: 231 GFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGML----SA 286
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
G + V Y L+ C + FEEA ++ ++ +G K CY L C G D E
Sbjct: 287 GMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGG-DFET 345
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDR 325
L E++ K VPS S ++ L +SK++EA ++I +++++
Sbjct: 346 ALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 255 GLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDE 314
G++ YNR+ C + + ++ E KG P+ SS+ M Y+E K DE
Sbjct: 182 GIEPDLETYNRMIKVFC-ESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDE 240
Query: 315 ADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILL 374
KV+ M+DRG + + ++ +LCK + EA K + + M++ PN+
Sbjct: 241 VGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEA-KALLDGMLSAGMKPNTV------ 293
Query: 375 KNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSY 434
TY L+ C E + EA +L + M +
Sbjct: 294 ------------------------------TYSHLIHGFCNEDDFEEAKKLFKIMVNRGC 323
Query: 435 WPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSE 494
P ++ Y +LI LC G A+ ++ + + +P S+ KSL + ++ + E
Sbjct: 324 KPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKE 383
Query: 495 IFNRLR 500
+ +++
Sbjct: 384 LIGQVK 389
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 3/191 (1%)
Query: 295 SLSSYNAMAVDLYSESKIDEADKVIVEMQDR-GFKPTRAIFEAKVAALCKVSRVDEAIKV 353
++ S NA+ EA +V +EM G +P + + C+ + +
Sbjct: 150 TVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSI 209
Query: 354 IEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEML 413
+ E M PNS + +++ S V + L M K G TY I ++ L
Sbjct: 210 VAE-MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL-AMMKDRGVNIGVSTYNIRIQSL 267
Query: 414 CRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEI 473
C+ ++ EA LL+ M P +Y+ LI G C+ EA + M+++G P+
Sbjct: 268 CKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDS 327
Query: 474 SVWKSLASLFC 484
+ +L C
Sbjct: 328 ECYFTLIYYLC 338
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 178/438 (40%), Gaps = 53/438 (12%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTV--FASAINIYANAGLVDEAITLFK 104
+Y TM+ G + E + ++ R C TV + IN+Y G + +A+ + +
Sbjct: 451 IYHTMMD--GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSR 508
Query: 105 NIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGK 164
+ + + ++++ ++ V A +F D +K V N ++ A CG
Sbjct: 509 VMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED-MVKEGMKPDVILYNNIISAFCGM 567
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
G D A+Q +EM P ++ ++ G G + + + + M R G
Sbjct: 568 GNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV-FDMMRRC---GCVPT 623
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS---DGRDIEGTK 281
+ + L++ L E + E+A+EIL ++ G+ A + Y ++ S G+ E
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFT 683
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
RL +E L VD+++ +EA + A
Sbjct: 684 RLQNEGL--------------DVDIFT-------------------------YEALLKAC 704
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
CK R+ A+ V +E M A N NS VYNIL+ G+ + + +M KK G
Sbjct: 705 CKSGRMQSALAVTKE-MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM-KKEGVKP 762
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
D TY + + A+Q +E+M P +Y +LIKG +A+
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822
Query: 462 EDMISQGKLPEISVWKSL 479
E+M + G P+ +V+ L
Sbjct: 823 EEMKAMGIKPDKAVYHCL 840
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 139/336 (41%), Gaps = 9/336 (2%)
Query: 43 HNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
HN Y+ MI+ V E M ++ + ++ + I+ + G +D AI
Sbjct: 517 HNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQT 576
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF-VDNSCGWEVKSRVHALNLLMYAL 161
K + + T++F ++ + + +F + CG VH N L+ L
Sbjct: 577 VKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG--CVPTVHTFNGLINGL 634
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
K + + A++I EM G N +Y +M+G G +A + F R+ +G
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA----FEYFTRLQNEGL 690
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
DI Y LL A C+ G+ + A+ + ++ + + YN L G D+
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG-DVWEAA 749
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
LI + +G P + +Y + ++ A + I EM+ G KP + +
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL 377
+ S ++A+ EE M A+ P+ VY+ LL +L
Sbjct: 810 ARASLPEKALSCYEE-MKAMGIKPDKAVYHCLLTSL 844
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 101/498 (20%), Positives = 200/498 (40%), Gaps = 59/498 (11%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
+ M+ G G + R+ E+MR ++ S I+ YA +DEA++ + +
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVH-ALNL-----LMYAL 161
+ +++ ++ EAA F + R+H LN ++YA
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWF-------DEAKRIHKTLNASIYGKIIYAH 424
Query: 162 CGKGRSDLALQIFQEMDYQGC-------YPNRDSYAILM---KGLCHDGRLHEATHL--- 208
C + A + +EM+ +G + D Y ++ KGL RL E
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 209 --------LYSMFWRIS----------QKGNGEDIVVYRTLLDALCEDGKFEEAIEILSK 250
LY+ +IS ++G ++ Y +++ + + A +
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 251 ILRKGLKAPKRCYNRLDLSQCSDG---RDIEGTK---RLIHEALIKGSVPSLSSYNAMAV 304
++++G+K YN + + C G R I+ K +L H + +P + Y A +
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY-AKSG 603
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
D+ + +V M+ G PT F + L + ++++A+++++E M
Sbjct: 604 DM------RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE-MTLAGVS 656
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
N Y +++ +VG++ E ++ + G D TY LL+ C+ R A
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE-GLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
+ ++MS ++ + YN LI G G +EA ++ M +G P+I + S S
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 485 NLEMMKASSEIFNRLRSL 502
M +++ + +L
Sbjct: 776 KAGDMNRATQTIEEMEAL 793
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 6/304 (1%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+Y +IS G + +++M++ F I+ YA +G + ++ +F +
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ CV +FN L+ +V + ++E A + +D V + H +M G
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQMEKAVEI-LDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
+ A + F + +G + +Y L+K C GR+ A + M S + +
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM----SARNIPRNSF 730
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
VY L+D G EA +++ ++ ++G+K Y +S CS D+ + I E
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF-ISACSKAGDMNRATQTIEE 789
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
G P++ +Y + S ++A EM+ G KP +A++ + +L +
Sbjct: 790 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 849
Query: 347 VDEA 350
+ EA
Sbjct: 850 IAEA 853
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 7/319 (2%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+ H Y ++ I G M +I++M +D F I AGL + +
Sbjct: 148 FRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVV 207
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
F FN + S+N +L ++ + + ++ + V N++M+A
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVY-EQMLEDGFTPDVLTYNIVMFA 266
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
G++D ++ EM G P+ +Y IL+ L + A +LL M + G
Sbjct: 267 NFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHM----REVG 322
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
++ + TL+D L GK E + + ++ G CY + S G ++E
Sbjct: 323 VEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGG-ELEKA 381
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+ + E KG +P++ +YN+M K EA ++ EM+ RG P ++ V
Sbjct: 382 EEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNN 441
Query: 341 LCKVSRVDEAIKVIEEDMV 359
L +V EA +V+ +DMV
Sbjct: 442 LKNAGKVLEAHEVV-KDMV 459
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 124/313 (39%), Gaps = 45/313 (14%)
Query: 208 LLYSMF-WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL 266
L Y F W Q+ Y L+ E G+++ ++ ++++ G +N L
Sbjct: 134 LAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 193
Query: 267 DLSQCSDGRDIEGTKRLIHEALIKGSV----PSLSSYNAMAVDLYSESKIDEADKVIVEM 322
+ C + G R + E IK P SYNA+ L + D V +M
Sbjct: 194 -ICTCGEA----GLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQM 248
Query: 323 QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN 382
+ GF P + + A ++ + D ++++E MV P+ YNILL +L
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDE-MVKDGFSPDLYTYNILLHHLATGNK 307
Query: 383 SAAVLESLNKMSK----------------------------------KVGCTADRETYII 408
A L LN M + KVGCT D Y +
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
++ +A ++ ++M+ K P +YNS+I+G C G+ EA L++M S+G
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 469 KLPEISVWKSLAS 481
P V+ +L +
Sbjct: 428 CNPNFVVYSTLVN 440
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 197/487 (40%), Gaps = 59/487 (12%)
Query: 11 PTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQ 70
P L + R +P K L F S P Y H+ Y+ + + +G LGE+ D++
Sbjct: 58 PVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGS 117
Query: 71 MRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQF-NCVNWTQSFNTLLQIMVSED 129
M++D T+ ++ +G + A+ + + + +C+N ++++L +V +
Sbjct: 118 MKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLN-PSVYDSVLIALVKKH 176
Query: 130 R-----------LEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQ---IFQ 175
LEA+ D++ + S + + L G R+D+ + +F+
Sbjct: 177 ELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFE 236
Query: 176 EMDYQGCYP-NRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN--GEDIVVYRTLL 232
++ + + SY I + G G L A L M R S G+ G DI Y +L+
Sbjct: 237 KLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLI 296
Query: 233 DALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGS 292
LC GK ++A+ + E + G
Sbjct: 297 HVLCLFGKAKDALIVWD------------------------------------ELKVSGH 320
Query: 293 VPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIK 352
P S+Y + ++D+A ++ EMQ GF P ++ + K +V EA +
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQ 380
Query: 353 VIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEM 412
+ E+ MV + YNIL+ L G + A + KK G D T+ I+
Sbjct: 381 LFEK-MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKK-GQFVDAITFSIVGLQ 438
Query: 413 LCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL-P 471
LCRE + A +L+E+M + + + +SL+ G GR ++ L I +G L P
Sbjct: 439 LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGR-WDWKEKLMKHIREGNLVP 497
Query: 472 EISVWKS 478
+ W +
Sbjct: 498 NVLRWNA 504
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 120/269 (44%), Gaps = 24/269 (8%)
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQ------SFNTLLQIMVSEDRLEAAHGLFVD 140
I+ + G +D A++LFK + + + V + ++N+L+ ++ + A L V
Sbjct: 255 IHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGK--AKDALIV- 311
Query: 141 NSCGW-EVKSRVH-----ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMK 194
W E+K H +L+ C R D A++I+ EM Y G P+ Y L+
Sbjct: 312 ----WDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLD 367
Query: 195 GLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRK 254
G ++ EA L F ++ Q+G Y L+D L +G+ E + + +K
Sbjct: 368 GTLKARKVTEACQL----FEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKK 423
Query: 255 GLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDE 314
G ++ + L C +G+ +EG +L+ E +G L + +++ + + + + D
Sbjct: 424 GQFVDAITFSIVGLQLCREGK-LEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDW 482
Query: 315 ADKVIVEMQDRGFKPTRAIFEAKVAALCK 343
+K++ +++ P + A V A K
Sbjct: 483 KEKLMKHIREGNLVPNVLRWNAGVEASLK 511
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQ-SFNTLLQIMVSEDRLEAAHGLF---VDNS 142
++IY + G + A LF+ + T ++N+++ V + + A G+ +N
Sbjct: 601 LSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENF 660
Query: 143 CGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRL 202
C ++ + N+++ L GR+DLA + + QG Y + Y L+ L RL
Sbjct: 661 CAADIAT----YNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRL 716
Query: 203 HEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKG 255
EAT L F + G D+V Y T+++ + GK +EA + L +L G
Sbjct: 717 DEATQL----FDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG 765
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 119 NTLLQIMVSEDRLEAAHGLF-VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
NT L I +S+ L A LF + N G + N +M + KG A + +M
Sbjct: 598 NTFLSIYLSKGDLSLACKLFEIFNGMG-VTDLTSYTYNSMMSSFVKKGYFQTARGVLDQM 656
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
C + +Y ++++GL GR A+ +L R++++G DIV+Y TL++AL +
Sbjct: 657 FENFCAADIATYNVIIQGLGKMGRADLASAVLD----RLTKQGGYLDIVMYNTLINALGK 712
Query: 238 DGKFEEAIEILSKILRKGLKAPKRCYNRL 266
+ +EA ++ + G+ YN +
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTM 741
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 140/316 (44%), Gaps = 7/316 (2%)
Query: 15 SQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQD 74
+Q+++ + AL F K R P + H+G Y TM+ LG + + G + ++++M +D
Sbjct: 335 NQVLKQMNDYGNALGFFYWLK-RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD 393
Query: 75 SCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAA 134
C+ + I+ Y A ++EA+ +F + + C ++ TL+ I L+ A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 135 HGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMK 194
++ G + ++++ L G A ++F EM QGC PN +Y I+M
Sbjct: 454 MDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 195 GLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRK 254
L R ++ LY + G D V Y +++ L G EEA + +++ +K
Sbjct: 513 -LHAKARNYQNALKLYR---DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 255 GLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDE 314
+ Y L + ++E + L G P++ + N++ +KI E
Sbjct: 569 NWIPDEPVYGLL-VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 315 ADKVIVEMQDRGFKPT 330
A +++ M G +P+
Sbjct: 628 AYELLQNMLALGLRPS 643
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 9/253 (3%)
Query: 170 ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYR 229
A+ +F +M GC P+R +Y L+ G L A M+ R+ G D Y
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM----DMYQRMQAGGLSPDTFTYS 473
Query: 230 TLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN-RLDLSQCSDGRDIEGTKRLIHEAL 288
+++ L + G A ++ +++ +G YN +DL + R+ + +L +
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH--AKARNYQNALKLYRDMQ 531
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
G P +Y+ + L ++EA+ V EMQ + + P ++ V K V+
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
+A + + M+ PN N LL V A E L M +G +TY +
Sbjct: 592 KAWQWYQA-MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM-LALGLRPSLQTYTL 649
Query: 409 LLEMLCRERRYLE 421
LL R L+
Sbjct: 650 LLSCCTDGRSKLD 662
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 3/231 (1%)
Query: 253 RKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKI 312
+ G K Y + + + +L+ E + G P+ +YN + + +
Sbjct: 357 QPGFKHDGHTYTTM-VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 313 DEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNI 372
+EA V +MQ+ G KP R + + K +D A+ + + M A P++ Y++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR-MQAGGLSPDTFTYSV 474
Query: 373 LLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK 432
++ L G+ A + +M + GCT + TY I++++ + R Y A +L M
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 433 SYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
+ P +Y+ +++ L G EA +M + +P+ V+ L L+
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/520 (20%), Positives = 208/520 (40%), Gaps = 65/520 (12%)
Query: 9 LTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGR-LGEMRDV 67
LT + +R +K L+ F ++ Y H+ + M+ ++ R + +
Sbjct: 37 LTHDNVYSCLRESPADLKTLNFFFWC-AKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRI 95
Query: 68 IEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVS 127
IE+++ CE K VF + I+ + D+AI ++ + F V T++ N ++ +
Sbjct: 96 IERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFK 155
Query: 128 EDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGK-GRSDL--ALQIFQEMDYQGCYP 184
+ + A +F G ++ + ++ + C + GR DL + + M +G YP
Sbjct: 156 LNVVNGALEIFE----GIRFRN-FFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYP 210
Query: 185 NRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEA 244
NR+ + +++ C G + EA ++ M G + V+ L+ G+ ++A
Sbjct: 211 NRERFGQILRLCCRTGCVSEAFQVVGLMIC----SGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAV 304
+++ +K+++ G Y L + D ++ ++ + +G P + N M
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSL-IKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV-----IEEDMV 359
+ +EA KV ++ R P + F + +++LC + D ++ + D+V
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLV 385
Query: 360 AVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCR---- 415
N L N +G ++ L+ L+ MS K D TY + L LCR
Sbjct: 386 TGNLLSNC---------FSKIGYNSYALKVLSIMSYK-DFALDCYTYTVYLSALCRGGAP 435
Query: 416 ------------ERRYLEAS-------------------QLLEQMSIKSYWPCADSYNSL 444
E+++L+A L ++ ++ Y SY
Sbjct: 436 RAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVA 495
Query: 445 IKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
IKGL R EA DM G P ++++ S C
Sbjct: 496 IKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLC 535
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 141/373 (37%), Gaps = 68/373 (18%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
V++ ++S SG + D+ +M Q C + S I + + G+VDEA T+ +
Sbjct: 249 VWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV 308
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ GL D + NL+++ GR
Sbjct: 309 --------------------------QSEGLAPD----------IVLCNLMIHTYTRLGR 332
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH---EATH------------LLYS 211
+ A ++F ++ + P++ ++A ++ LC G+ TH LL +
Sbjct: 333 FEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSN 392
Query: 212 MFWRI-------------SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA 258
F +I S K D Y L ALC G AI++ I+++
Sbjct: 393 CFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHL 452
Query: 259 PKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKV 318
++ + S G+ L +++ + SY L +I+EA +
Sbjct: 453 DAHFHSAIIDSLIELGK-YNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSL 511
Query: 319 IVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMV-AVNCLPNS--EVYNILLK 375
+M++ G P R + ++ LCK ++ K++ E + V PN+ +VY++L +
Sbjct: 512 CCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSR 571
Query: 376 NLRNVGNSAAVLE 388
+ +V E
Sbjct: 572 YRGDFSEFRSVFE 584
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 170/409 (41%), Gaps = 32/409 (7%)
Query: 95 LVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHAL 154
+ D + L N+P + +N + + + R + A WEV + +
Sbjct: 253 MADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDA----------WEVYEAMDKI 302
Query: 155 N---------LLMYALCGKGRSDLAL-QIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHE 204
N +L+ L GRS + +IF++M +G ++D + L+K C +G E
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 205 ATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN 264
A + M +KG + +VY TL+DA + EE + +++ KGLK YN
Sbjct: 363 ALVIQTEM----EKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYN 418
Query: 265 RL-DLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK--IDEADKVIVE 321
L D DI T L+ E G P++ SY + + Y +K D A +
Sbjct: 419 ILMDAYARRMQPDIVET--LLREMEDLGLEPNVKSYTCL-ISAYGRTKKMSDMAADAFLR 475
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
M+ G KP+ + A + A VS E E+M P+ E Y +L R G
Sbjct: 476 MKKVGLKPSSHSYTALIHAYS-VSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSG 534
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
++ ++E + K+ + R TY LL+ ++ Y+EA ++ + S P +Y
Sbjct: 535 DTGKLME-IWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTY 593
Query: 442 NSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMK 490
N L+ G+ + L++M + P+ + ++ F + K
Sbjct: 594 NMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFK 642
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 159/370 (42%), Gaps = 16/370 (4%)
Query: 49 ATMISILGTSGRLG-EMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
A +I+ L +GR E+ ++ E+M + + VF + + + GL +EA+ + +
Sbjct: 312 AILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEME 371
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLMYALCGKGR 166
+ + T +NTL+ + +E GLF + G +K N+LM A + +
Sbjct: 372 KKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG--LKPSAATYNILMDAYARRMQ 429
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
D+ + +EM+ G PN SY L+ GR + + + F R+ + G
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSYTCLISAY---GRTKKMSDMAADAFLRMKKVGLKPSSH 486
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR-LDLSQCS--DGRDIEGTKRL 283
Y L+ A G E+A ++ ++G+K Y LD + S G+ +E K +
Sbjct: 487 SYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM 546
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCK 343
+ E IKG + +YN + + EA V+ E G +P+ + + A +
Sbjct: 547 LREK-IKG---TRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Query: 344 VSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADR 403
+ D + + ++M A+N P+S Y+ ++ V + +KM K G D
Sbjct: 603 GGQ-DAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF-FYHKMMVKSGQVPDP 660
Query: 404 ETYIILLEML 413
+Y L +L
Sbjct: 661 RSYEKLRAIL 670
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 94/235 (40%), Gaps = 8/235 (3%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N VY T++ S + E+ + +MR + + ++ YA D TL
Sbjct: 378 NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLL 437
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLE--AAHGLFVDNSCGWEVKSRVHALNLLMYAL 161
+ + +S+ L+ ++ AA G +K H+ L++A
Sbjct: 438 REMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVG--LKPSSHSYTALIHAY 495
Query: 162 CGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN 221
G + A F+EM +G P+ ++Y ++ G + ++ + R KG
Sbjct: 496 SVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLME-IWKLMLREKIKGT 554
Query: 222 GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
+ Y TLLD + G + EA +++S+ + GL+ YN L + G+D
Sbjct: 555 R---ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQD 606
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 140/316 (44%), Gaps = 7/316 (2%)
Query: 15 SQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQD 74
+Q+++ + AL F K R P + H+G Y TM+ LG + + G + ++++M +D
Sbjct: 335 NQVLKQMNDYGNALGFFYWLK-RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD 393
Query: 75 SCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAA 134
C+ + I+ Y A ++EA+ +F + + C ++ TL+ I L+ A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 135 HGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMK 194
++ G + ++++ L G A ++F EM QGC PN +Y I+M
Sbjct: 454 MDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 195 GLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRK 254
L R ++ LY + G D V Y +++ L G EEA + +++ +K
Sbjct: 513 -LHAKARNYQNALKLYR---DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 255 GLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDE 314
+ Y L + ++E + L G P++ + N++ +KI E
Sbjct: 569 NWIPDEPVYGLL-VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 315 ADKVIVEMQDRGFKPT 330
A +++ M G +P+
Sbjct: 628 AYELLQNMLALGLRPS 643
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 9/253 (3%)
Query: 170 ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYR 229
A+ +F +M GC P+R +Y L+ G L A M+ R+ G D Y
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM----DMYQRMQAGGLSPDTFTYS 473
Query: 230 TLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN-RLDLSQCSDGRDIEGTKRLIHEAL 288
+++ L + G A ++ +++ +G YN +DL + R+ + +L +
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH--AKARNYQNALKLYRDMQ 531
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
G P +Y+ + L ++EA+ V EMQ + + P ++ V K V+
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
+A + + M+ PN N LL V A E L M +G +TY +
Sbjct: 592 KAWQWYQA-MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM-LALGLRPSLQTYTL 649
Query: 409 LLEMLCRERRYLE 421
LL R L+
Sbjct: 650 LLSCCTDGRSKLD 662
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 3/231 (1%)
Query: 253 RKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKI 312
+ G K Y + + + +L+ E + G P+ +YN + + +
Sbjct: 357 QPGFKHDGHTYTTM-VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 313 DEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNI 372
+EA V +MQ+ G KP R + + K +D A+ + + M A P++ Y++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR-MQAGGLSPDTFTYSV 474
Query: 373 LLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK 432
++ L G+ A + +M + GCT + TY I++++ + R Y A +L M
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 433 SYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
+ P +Y+ +++ L G EA +M + +P+ V+ L L+
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 140/316 (44%), Gaps = 7/316 (2%)
Query: 15 SQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQD 74
+Q+++ + AL F K R P + H+G Y TM+ LG + + G + ++++M +D
Sbjct: 335 NQVLKQMNDYGNALGFFYWLK-RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD 393
Query: 75 SCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAA 134
C+ + I+ Y A ++EA+ +F + + C ++ TL+ I L+ A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 135 HGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMK 194
++ G + ++++ L G A ++F EM QGC PN +Y I+M
Sbjct: 454 MDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 195 GLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRK 254
L R ++ LY + G D V Y +++ L G EEA + +++ +K
Sbjct: 513 -LHAKARNYQNALKLYR---DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 255 GLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDE 314
+ Y L + ++E + L G P++ + N++ +KI E
Sbjct: 569 NWIPDEPVYGLL-VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 315 ADKVIVEMQDRGFKPT 330
A +++ M G +P+
Sbjct: 628 AYELLQNMLALGLRPS 643
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 9/253 (3%)
Query: 170 ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYR 229
A+ +F +M GC P+R +Y L+ G L A M+ R+ G D Y
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM----DMYQRMQAGGLSPDTFTYS 473
Query: 230 TLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN-RLDLSQCSDGRDIEGTKRLIHEAL 288
+++ L + G A ++ +++ +G YN +DL + R+ + +L +
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH--AKARNYQNALKLYRDMQ 531
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
G P +Y+ + L ++EA+ V EMQ + + P ++ V K V+
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
+A + + M+ PN N LL V A E L M +G +TY +
Sbjct: 592 KAWQWYQA-MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM-LALGLRPSLQTYTL 649
Query: 409 LLEMLCRERRYLE 421
LL R L+
Sbjct: 650 LLSCCTDGRSKLD 662
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 3/231 (1%)
Query: 253 RKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKI 312
+ G K Y + + + +L+ E + G P+ +YN + + +
Sbjct: 357 QPGFKHDGHTYTTM-VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 313 DEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNI 372
+EA V +MQ+ G KP R + + K +D A+ + + M A P++ Y++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR-MQAGGLSPDTFTYSV 474
Query: 373 LLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK 432
++ L G+ A + +M + GCT + TY I++++ + R Y A +L M
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 433 SYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
+ P +Y+ +++ L G EA +M + +P+ V+ L L+
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 130/576 (22%), Positives = 222/576 (38%), Gaps = 97/576 (16%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIF-------NEAKSRY--PKYTHNGPVYATMISILG 56
P +T + Q+ + + KA F N+A S YT+N TMI G
Sbjct: 255 PDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYN-----TMIDTYG 309
Query: 57 TSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQ 116
SG++ E + ++M ++ F + I+IY N G + E +L K + + +C T+
Sbjct: 310 KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTR 368
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQE 176
++N L+ + + +E A F + +K + L+YA + + A + E
Sbjct: 369 TYNILISLHTKNNDIERAGAYFKEMKDDG-LKPDPVSYRTLLYAFSIRHMVEEAEGLIAE 427
Query: 177 MD--------YQGCYPNR--------------------------DSYAILMKGLCHDGRL 202
MD Y R + Y+ + G L
Sbjct: 428 MDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYL 487
Query: 203 HEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC 262
EA + Q+ N ++ Y ++ A E+A E+ ++ G+ K
Sbjct: 488 SEAERVFIC-----CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCT 542
Query: 263 YNRLDLSQCSDGRDIEGTKRLIHEALIK-GSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
YN L Q D+ R E + + G V Y A+ +++ A++V E
Sbjct: 543 YN--TLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKE 600
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
M + +P ++ + A V +A+ +E M NS +YN L+K VG
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA-MKEAGIPGNSVIYNSLIKLYTKVG 659
Query: 382 ---NSAAV----LESLNKM-----------------------------SKKVGCTADRET 405
+ A+ L+S NK S K A+ T
Sbjct: 660 YLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFT 719
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSL-GRQYEAVMWLEDM 464
+ ++L M + R+ EA+Q+ +QM SYNS++ GL +L GR EAV ++M
Sbjct: 720 FAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL-GLFALDGRFKEAVETFKEM 778
Query: 465 ISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+S G P+ S +KSL ++ L M K + +R
Sbjct: 779 VSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIR 814
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 105/534 (19%), Positives = 212/534 (39%), Gaps = 49/534 (9%)
Query: 5 WPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEM 64
W L+ + I++ Q + +A+ IF KS+ Y N Y M+ ILG + + +
Sbjct: 148 WAERLSNKERTIILKEQIHWERAVEIFEWFKSK-GCYELNVIHYNIMLRILGKACKWRYV 206
Query: 65 RDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQI 124
+ + ++M + + ++ + + I++Y+ GL A+ + + + +LQ+
Sbjct: 207 QSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQM 266
Query: 125 MVSEDRLEAAHGLFVDNSCGWEVKSRVH------ALNLLMYALCGKGRSDLALQIFQEMD 178
+ A F SC E K+ H N ++ G+ A + F+ M
Sbjct: 267 YKKAREFQKAEEFFKKWSCD-ENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRML 325
Query: 179 YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM-------------------------- 212
+G P ++ ++ ++G+L E T L+ +M
Sbjct: 326 EEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIER 385
Query: 213 ----FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDL 268
F + G D V YRTLL A EEA +++++ ++ + Y + L
Sbjct: 386 AGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDE--YTQSAL 443
Query: 269 SQC-SDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSE-SKIDEADKVIVEMQDRG 326
++ + +E + + G++ S Y+A +D Y E + EA++V + Q+
Sbjct: 444 TRMYVEAEMLEKSWSWFKRFHVAGNMSS-EGYSA-NIDAYGERGYLSEAERVFICCQEVN 501
Query: 327 FKPTRAIFEAKVAALC-KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAA 385
R + E V +S+ E + E M++ P+ YN L++ L +
Sbjct: 502 ---KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 386 VLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
L KM ++ G +D Y ++ + + A ++ ++M + P Y LI
Sbjct: 559 GRCYLEKM-RETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLI 617
Query: 446 KGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
G +A+ ++E M G ++ SL L+ + + + I+ +L
Sbjct: 618 NAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL 671
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 160/407 (39%), Gaps = 55/407 (13%)
Query: 127 SEDRLEAAHGLFVDNSCGWEV------------KSRVHALNLLMYALCGKGRSDLALQIF 174
SE + E + DN G V K RV N +M AL G DLAL ++
Sbjct: 192 SEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVY 251
Query: 175 QEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDA 234
++ G ++ IL+KGLC GR+ E +L M + + D+ Y ++
Sbjct: 252 EDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKP----DVFAYTAMIKT 307
Query: 235 LCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP 294
L +G + ++ + ++ R +K Y L + C DGR +E L E K +
Sbjct: 308 LVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGR-VERGYELFMEMKGKQILI 366
Query: 295 SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV- 353
Y + ++ K+ A + ++ D G+ I+ A + LC V++VD+A K+
Sbjct: 367 DREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLF 426
Query: 354 ---IEEDMVA-VNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVG---------CT 400
IEE++ L V +++ L + N VLE + ++ V
Sbjct: 427 QVAIEEELEPDFETLSPIMVAYVVMNRLSDFSN---VLERIGELGYPVSDYLTQFFKLLC 483
Query: 401 ADRE---------------------TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCAD 439
AD E Y IL+E L + ++ L +M + P +
Sbjct: 484 ADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSS 543
Query: 440 SYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNL 486
SY+ I G A + E +I +P I+ + SL C +
Sbjct: 544 SYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQI 590
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 135/360 (37%), Gaps = 52/360 (14%)
Query: 148 KSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATH 207
K A N Y L G A Q+ + MD QG P+ + IL+ R+H
Sbjct: 155 KHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILI-------RMHADNR 207
Query: 208 L---LYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN 264
+Y ++ ++ + G + +Y ++DAL ++G F+ A+ + GL +
Sbjct: 208 RGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFM 267
Query: 265 RLDLSQCSDGRDIEGTKRL--IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM 322
L C GR E + L + E L K P + +Y AM L SE +D + +V EM
Sbjct: 268 ILVKGLCKAGRIEEMLEILQRMRENLCK---PDVFAYTAMIKTLVSEGNLDASLRVWDEM 324
Query: 323 QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN 382
+ KP + V LCK RV+ ++ E
Sbjct: 325 RRDEIKPDVMAYGTLVVGLCKDGRVERGYELFME-------------------------- 358
Query: 383 SAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYN 442
K DRE Y +L+E + + A L E + Y YN
Sbjct: 359 -----------MKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYN 407
Query: 443 SLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRSL 502
++IKGLCS+ + +A + I + P+ + + + + S + R+ L
Sbjct: 408 AVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGEL 467
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 188/463 (40%), Gaps = 85/463 (18%)
Query: 31 FNEAKSRYPKYTHNGPV-----YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
F+ A + Y + +G V + ++ L +GR+ EM +++++MR++ CK VFA
Sbjct: 244 FDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENL--CKPDVFA- 300
Query: 86 AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGW 145
+ +++ +VSE L+A+ ++ D
Sbjct: 301 --------------------------------YTAMIKTLVSEGNLDASLRVW-DEMRRD 327
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
E+K V A L+ LC GR + ++F EM + +R+ Y +L++G DG++ A
Sbjct: 328 EIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSA 387
Query: 206 THLLYSMFWR-ISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR--- 261
+L W + G DI +Y ++ LC + ++A ++ + + L+
Sbjct: 388 CNL-----WEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLS 442
Query: 262 -------CYNRL-DLSQ-----------------------CSDGRDIEGTKRLIHEALIK 290
NRL D S C+D + + K
Sbjct: 443 PIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTK 502
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD-E 349
G S+S YN + LY I ++ + EM+ GF+P + + +A C V + D +
Sbjct: 503 GH-GSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYS--IAICCFVEKGDVK 559
Query: 350 AIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIIL 409
A E ++ ++C+P+ Y L K L +G AV+ + + V Y +
Sbjct: 560 AACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALT 619
Query: 410 LEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLG 452
+ +C+ + +++++M+ + + Y ++I G+ G
Sbjct: 620 VCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHG 662
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 162/404 (40%), Gaps = 52/404 (12%)
Query: 85 SAINIYANAGLVDEAITLFKNI--PQFNCVNWTQSFNTLLQ--IMVSEDRLEAAH---GL 137
S + Y + +V++ + LF++I Q N +F LL + + H L
Sbjct: 90 SVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNL 149
Query: 138 FVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLC 197
V+N G E ++ + +LC GR D A + +E+ + P+ +Y L+K LC
Sbjct: 150 MVNN--GLEPDQVT--TDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 198 HDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
LH + M K D+V + L+D +C EA+ ++SK+ G K
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVK---PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 258 APKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADK 317
YN + C+ L KGS EA
Sbjct: 263 PDCFLYNTIMKGFCT---------------LSKGS---------------------EAVG 286
Query: 318 VIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL 377
V +M++ G +P + + + L K RV+EA ++ + MV P++ Y L+ +
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA-RMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 378 RNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPC 437
G S L L +M + GC + TY LL LC+ R + +L E M
Sbjct: 346 CRKGESLGALSLLEEMEAR-GCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLE 404
Query: 438 ADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLAS 481
++ Y +L++ L G+ EA + + L + S + +L +
Sbjct: 405 SNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLET 448
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 131/317 (41%), Gaps = 10/317 (3%)
Query: 184 PNRDSYAILMKGLCH--DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF 241
P R ++ IL+ C D + +L M G D V + +LCE G+
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMV----NNGLEPDQVTTDIAVRSLCETGRV 175
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV-PSLSSYN 300
+EA +++ ++ K YN L L +D+ + E V P L S+
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFL-LKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 301 AMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVA 360
+ ++ + + EA ++ ++ + GFKP ++ + C +S+ EA+ V ++ M
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK-MKE 293
Query: 361 VNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYL 420
P+ YN L+ L G L M G D TY L+ +CR+ L
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD-AGYEPDTATYTSLMNGMCRKGESL 352
Query: 421 EASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLA 480
A LLE+M + P +YN+L+ GLC + + E M S G E + + +L
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Query: 481 SLFCNLEMMKASSEIFN 497
+ + E+F+
Sbjct: 413 RSLVKSGKVAEAYEVFD 429
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 129/312 (41%), Gaps = 6/312 (1%)
Query: 67 VIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
V+ M + E A+ G VDEA L K + + + T ++N LL+ +
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 127 SEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNR 186
L + + ++VK + + +L+ +C A+ + ++ G P+
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIE 246
Y +MKG C + EA ++ ++ ++G D + Y TL+ L + G+ EEA
Sbjct: 266 FLYNTIMKGFCTLSKGSEAV----GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
L ++ G + Y L C G + G L+ E +G P+ +YN + L
Sbjct: 322 YLKTMVDAGYEPDTATYTSLMNGMCRKGESL-GALSLLEEMEARGCAPNDCTYNTLLHGL 380
Query: 307 YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPN 366
+D+ ++ M+ G K + V +L K +V EA +V + V L +
Sbjct: 381 CKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDY-AVDSKSLSD 439
Query: 367 SEVYNILLKNLR 378
+ Y+ L L+
Sbjct: 440 ASAYSTLETTLK 451
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 150/354 (42%), Gaps = 17/354 (4%)
Query: 153 ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
A ++ +LC R+ A +I M +G P R SY ++ GLC DG A LL
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLL--- 365
Query: 213 FWRISQKGNGEDIV----VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDL 268
++G+ + Y+ L+++LC++ +A +L +LRK R YN
Sbjct: 366 -----EEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLR 420
Query: 269 SQCSDGRDIEGTKRLIHEALIKGSV-PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
C E L+ ++++G P + N + L ++D+A KV+ +M F
Sbjct: 421 GLCVMDNPTEILNVLV--SMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF 478
Query: 328 -KPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAV 386
P + L R +EA+ V+ M P YN +++ L +
Sbjct: 479 CAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEA 538
Query: 387 LESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIK 446
+ ++ +K TAD TY I+++ LC + A + + + S A Y + +K
Sbjct: 539 MSVFGQL-EKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLK 597
Query: 447 GLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
GLC G +A +L D+ G +P + + ++ + + + + +I +R
Sbjct: 598 GLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMR 651
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 170/391 (43%), Gaps = 17/391 (4%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVH-----ALNLLMYALCGKGRSDLAL 171
++N L+ + + R+ AH L D +++R H L+ C ++A
Sbjct: 164 NYNRLMNQLCTIYRVIDAHKLVFD------MRNRGHLPDVVTFTTLIGGYCEIRELEVAH 217
Query: 172 QIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMF-WRISQKGNGEDIVVYRT 230
++F EM G PN + ++L+ G + L+ ++ + ++ +
Sbjct: 218 KVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFAN 277
Query: 231 LLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIK 290
L+D++C +G F + EI + + Y + S C R+ G R+++ K
Sbjct: 278 LVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRN-HGAARIVYIMKSK 336
Query: 291 GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA 350
G P +SYNA+ L + A +++ E + F P+ ++ + +LCK +A
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA 396
Query: 351 IKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILL 410
V+E M+ + +YNI L+ L + N +L L M + C D T ++
Sbjct: 397 RNVLEL-MLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQG-DCRPDEYTLNTVI 454
Query: 411 EMLCRERRYLEASQLLEQMSIKSY-WPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGK 469
LC+ R +A ++L+ M + P A + N+++ GL + GR EA+ L ++ + K
Sbjct: 455 NGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENK 514
Query: 470 L-PEISVWKSLASLFCNLEMMKASSEIFNRL 499
+ P + + ++ L + +F +L
Sbjct: 515 IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQL 545
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 124/272 (45%), Gaps = 8/272 (2%)
Query: 219 KGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
+G D + +++ +LC+ G+F+EA L G +R N + +++ R
Sbjct: 84 RGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI-IARLLYSRSPV 142
Query: 279 GTKRLIHE--ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
T +IH K VPSL++YN + L + ++ +A K++ +M++RG P F
Sbjct: 143 STLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTT 202
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKN---LRNVGNSAAVLESL-NK 392
+ C++ ++ A KV +E M PNS ++L+ +R+V +++ L
Sbjct: 203 LIGGYCEIRELEVAHKVFDE-MRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEY 261
Query: 393 MSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLG 452
M + + + L++ +CRE + + ++ E MS+ +Y +I LC
Sbjct: 262 MKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYR 321
Query: 453 RQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
R + A + M S+G P + + ++ C
Sbjct: 322 RNHGAARIVYIMKSKGLKPRRTSYNAIIHGLC 353
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 104/268 (38%), Gaps = 41/268 (15%)
Query: 63 EMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFN-CVNWTQSFNTL 121
E+ +V+ M Q C + + IN G VD+A+ + ++ C + NT+
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 122 LQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQG 181
+ ++++ R E A + ++K V A N ++ L + D A+ +F +++
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKAS 549
Query: 182 CYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF 241
+ +YAI++ GLC ++ A + W + D VY L LC+ G
Sbjct: 550 VTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGR----HDAFVYAAFLKGLCQSGYL 605
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNA 301
+A C+ DL+ G++P++ YN
Sbjct: 606 SDA-----------------CHFLYDLAD-------------------SGAIPNVVCYNT 629
Query: 302 MAVDLYSESKIDEADKVIVEMQDRGFKP 329
+ + EA +++ EM+ G P
Sbjct: 630 VIAECSRSGLKREAYQILEEMRKNGQAP 657
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 81/188 (43%), Gaps = 35/188 (18%)
Query: 313 DEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNI 372
DEA +++ + RG++P + + +LC R DEA + +A +P+ N+
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLL-FLASGFIPDERTCNV 130
Query: 373 LLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK 432
++ L S + + +L + + +G K
Sbjct: 131 IIARLLY---SRSPVSTLGVIHRLIGFK-------------------------------K 156
Query: 433 SYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKAS 492
+ P +YN L+ LC++ R +A + DM ++G LP++ + +L +C + ++ +
Sbjct: 157 EFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVA 216
Query: 493 SEIFNRLR 500
++F+ +R
Sbjct: 217 HKVFDEMR 224
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 177/426 (41%), Gaps = 26/426 (6%)
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGW 145
+N+ G EA T+FK + + S+ TLL M + + + + + G
Sbjct: 52 MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGT 111
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
++ S N ++ A G + A+Q +M G P +Y L+KG G+ +
Sbjct: 112 KLDSIF--FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 206 THLLYSMFWRISQKGN---GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC 262
+ LL M ++GN G +I + L+ A C+ K EEA E++ K+ G++
Sbjct: 170 SELLDLML----EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 263 YNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLY-SESKIDEADKVIVE 321
YN + G + ++ + ++K + V Y E ++ + + +
Sbjct: 226 YNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRR 285
Query: 322 MQDRGFKPTRAIFEAKVAALCKV---SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLR 378
M++ + +F + + +V +DE + +++E V + + S V N
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAW----- 340
Query: 379 NVGNSAAVLESLNKMSK---KVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYW 435
+SA +E ++ K K G D Y IL + R + +A +LLE + ++S
Sbjct: 341 ---SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR- 396
Query: 436 PCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEI 495
P + ++I G CS G +A+ M G P I +++L + ++ + E+
Sbjct: 397 PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 456
Query: 496 FNRLRS 501
+R
Sbjct: 457 LQMMRG 462
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 168/401 (41%), Gaps = 52/401 (12%)
Query: 139 VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
V+ S V+SR +N+L+ +GR A +F+ + G P+ SY L+ +
Sbjct: 37 VEGSSCRTVRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMT- 91
Query: 199 DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA 258
+ + + S+ + Q G D + + +++A E G E+A++ L K+ GL
Sbjct: 92 ---VQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNP 148
Query: 259 PKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV---PSLSSYNAMAVDLYSESKIDEA 315
YN L G+ E + L+ L +G+V P++ ++N + + K++EA
Sbjct: 149 TTSTYNTLIKGYGIAGKP-ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
Query: 316 DKVIVEMQDRGFKPTRAIF----------------------------EAK---------V 338
+V+ +M++ G +P + +AK V
Sbjct: 208 WEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVV 267
Query: 339 AALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVG 398
C+ RV + ++ + M + N V+N L+ V + + E L M K+
Sbjct: 268 GGYCREGRVRDGLRFVRR-MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM-KECN 325
Query: 399 CTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAV 458
AD TY ++ +A+Q+ ++M P A +Y+ L KG +A
Sbjct: 326 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 385
Query: 459 MWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
LE +I + + P + ++ ++ S +C+ M + +FN++
Sbjct: 386 ELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKM 425
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 134/299 (44%), Gaps = 13/299 (4%)
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCED-GKFEEAI 245
D + L+ LC + +A HL++ ++ D + +L+ C G EA
Sbjct: 233 DDFQSLLSALCRYKNVSDAGHLIFC-----NKDKYPFDAKSFNIVLNGWCNVIGSPREAE 287
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVD 305
+ ++ G+K Y+ + +S S G + +L + P YNA+
Sbjct: 288 RVWMEMGNVGVKHDVVSYSSM-ISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHA 346
Query: 306 LYSESKIDEADKVIVEMQD-RGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
L S + EA ++ M++ +G +P + + + LCK + +EA +V +E M+
Sbjct: 347 LAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE-MLEKGLF 405
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
P Y+ ++ LR V E L KM +K+GC ETYI+L+ LCR R +
Sbjct: 406 PTIRTYHAFMRILRT---GEEVFELLAKM-RKMGCEPTVETYIMLIRKLCRWRDFDNVLL 461
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
L ++M K+ P SY +I GL G+ EA + ++M +G P +V + S F
Sbjct: 462 LWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWF 520
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 141/384 (36%), Gaps = 69/384 (17%)
Query: 16 QIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDS 75
+I+ +N + F + Y + Y +MISILG + +I++MR+ S
Sbjct: 132 EILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFS 191
Query: 76 CECKDT-VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRL-EA 133
++ I Y V +AI F +F F +LL + + +A
Sbjct: 192 PSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA 251
Query: 134 AHGLFVDNS-------------CGW--------------------EVKSRVHALNLLMYA 160
H +F + GW VK V + + ++
Sbjct: 252 GHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISC 311
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
G + L++F M + P+R Y ++ L + EA +L+ +M +KG
Sbjct: 312 YSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTM---EEEKG 368
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN---------------- 264
++V Y +L+ LC+ K EEA ++ ++L KGL R Y+
Sbjct: 369 IEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELL 428
Query: 265 -RLDLSQCSDG--------------RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSE 309
++ C RD + L E K P LSSY M L+
Sbjct: 429 AKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLN 488
Query: 310 SKIDEADKVIVEMQDRGFKPTRAI 333
KI+EA EM+D+G +P +
Sbjct: 489 GKIEEAYGYYKEMKDKGMRPNENV 512
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 138/330 (41%), Gaps = 12/330 (3%)
Query: 154 LNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMF 213
N ++ A G D A++IF++M GC P ++ L+KG G+L E++ LL M
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMML 451
Query: 214 WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSD 273
+ N + L+ A C K EEA I+ K+ G+K +N L +
Sbjct: 452 RDEMLQPNDRTCNI---LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 274 GRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAI 333
G +I L P++ + + E K++EA + M++ G P +
Sbjct: 509 GSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFV 568
Query: 334 FEAKVAALCKVSRVD---EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESL 390
F + + ++ +D E + ++EE V P+ ++ L+ +VG+ E
Sbjct: 569 FNSLIKGFLNINDMDGVGEVVDLMEEFGVK----PDVVTFSTLMNAWSSVGDMKRCEEIY 624
Query: 391 NKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCS 450
M + G D + IL + R +A Q+L QM P Y +I G CS
Sbjct: 625 TDMLEG-GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 451 LGRQYEAVMWLEDMIS-QGKLPEISVWKSL 479
G +A+ + M G P ++ +++L
Sbjct: 684 AGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/431 (19%), Positives = 175/431 (40%), Gaps = 11/431 (2%)
Query: 24 PMKALHIFNE--AKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDT 81
P +A IFN + P Y T+++ L + +I ++ ++ +
Sbjct: 335 PQEAHSIFNTLIEEGHKPSLI----TYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTI 390
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN 141
+F + IN + +G +D+A+ +F+ + + C +FNTL++ +LE + L
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
++ N+L+ A C + + + A I +M G P+ ++ L K G
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
A ++ K N + T+++ CE+GK EEA+ ++ G+
Sbjct: 511 TCTAEDMIIPRMLHNKVKPN---VRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF 567
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
+N L + + D++G ++ G P + +++ + S + +++ +
Sbjct: 568 VFNSL-IKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTD 626
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
M + G P F + ++A +++ + M PN +Y ++ + G
Sbjct: 627 MLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ-MRKFGVRPNVVIYTQIISGWCSAG 685
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
++ KM VG + + TY L+ ++ +A +LL+ M K+ P +
Sbjct: 686 EMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTM 745
Query: 442 NSLIKGLCSLG 452
+ G S+G
Sbjct: 746 QLIADGWKSIG 756
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 150/365 (41%), Gaps = 18/365 (4%)
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
+CG +V+SR LM L +GR A IF + +G P+ +Y L+ L
Sbjct: 315 TCG-DVRSRTK----LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKH 369
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
H L S+ ++ + G D +++ +++A E G ++A++I K+ G K
Sbjct: 370 FHS----LLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTAS 425
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV-PSLSSYNAMAVDLYSESKIDEADKVIV 320
+N L G+ +E + RL+ L + P+ + N + ++ KI+EA ++
Sbjct: 426 TFNTLIKGYGKIGK-LEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVY 484
Query: 321 EMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNV 380
+MQ G KP F A ++ A +I M+ PN ++
Sbjct: 485 KMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE 544
Query: 381 GNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERR---YLEASQLLEQMSIKSYWPC 437
G L +M K++G + + L++ E L+E+ +K P
Sbjct: 545 GKMEEALRFFYRM-KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVK---PD 600
Query: 438 ADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFN 497
++++L+ S+G DM+ G P+I + LA + + + +I N
Sbjct: 601 VVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILN 660
Query: 498 RLRSL 502
++R
Sbjct: 661 QMRKF 665
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 171/409 (41%), Gaps = 11/409 (2%)
Query: 88 NIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEV 147
N+ +N L D A L + + + N V S + L++ + D+L+ A + V
Sbjct: 113 NLCSNGKLTD-ACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGV 171
Query: 148 KSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATH 207
+ N+++ LC KG AL + ++M G P+ +Y +++ + G +A
Sbjct: 172 PDTI-TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR 230
Query: 208 LLYSMFWRIS-QKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL 266
FW+ Q G ++ Y L++ +C AIE+L + +G YN L
Sbjct: 231 -----FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 267 DLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRG 326
C G ++E +I L G + +YN + L S DE ++++ M
Sbjct: 286 VNYNCRRG-NLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 327 FKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAV 386
+ PT + + LCK + AI + M+ CLP+ YN +L + G
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQ-MLEQKCLPDIVTYNTVLGAMSKEGMVDDA 403
Query: 387 LESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIK 446
+E L + K C TY +++ L ++ +A +L QM +P + SLI
Sbjct: 404 IELLGLL-KNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY 462
Query: 447 GLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEI 495
G C EA L++ ++G S ++ + C + ++ + E+
Sbjct: 463 GFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEV 511
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/483 (21%), Positives = 207/483 (42%), Gaps = 27/483 (5%)
Query: 18 IRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCE 77
+R + PMK + ++ P ++ ++ L ++G+L + ++E M + +
Sbjct: 81 LRARVKPMKQFGLSSDG----PITENDEETNNEILHNLCSNGKLTDACKLVEVMARHN-- 134
Query: 78 CKDTVFASAINIY---ANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAA 134
+ F S N+ A +D+A+ + + + V T ++N ++ + + + A
Sbjct: 135 -QVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTA 193
Query: 135 HGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMK 194
L D S V N ++ + G ++ A++ +++ GC P +Y +L++
Sbjct: 194 LVLLEDMSLSGS-PPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVE 252
Query: 195 GLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRK 254
+C A +L M + +G DIV Y +L++ C G EE ++ IL
Sbjct: 253 LVCRYCGSARAIEVLEDM----AVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSH 308
Query: 255 GLKAPKRCYNRLDLSQCSDG--RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKI 312
GL+ YN L S CS ++E ++++ P++ +YN + L +
Sbjct: 309 GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQT---SYCPTVITYNILINGLCKARLL 365
Query: 313 DEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEV-YN 371
A +M ++ P + + A+ K VD+AI+++ ++ C P + YN
Sbjct: 366 SRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL--GLLKNTCCPPGLITYN 423
Query: 372 ILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSI 431
++ L G LE ++M G D T L+ CR EA Q+L++ S
Sbjct: 424 SVIDGLAKKGLMKKALELYHQM-LDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSN 482
Query: 432 KSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKA 491
+ +Y +I+GLC A+ +E M++ G P+ +++ ++ +E M
Sbjct: 483 RGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVK---GVEEMGM 539
Query: 492 SSE 494
SE
Sbjct: 540 GSE 542
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 135/347 (38%), Gaps = 42/347 (12%)
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
N +++ LC G+ A ++ + M P+ S + L++GL +L +A +L M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
G D + Y ++ LC+ G A+ +L D+S
Sbjct: 168 ----SGGVPDTITYNMIIGNLCKKGHIRTALVLLE-----------------DMS----- 201
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
+ GS P + +YN + ++ ++A + + G P +
Sbjct: 202 --------------LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITY 247
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
V +C+ AI+V+E DM C P+ YN L+ GN V + +
Sbjct: 248 TVLVELVCRYCGSARAIEVLE-DMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHIL 306
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
G + TY LL LC + E ++L M SY P +YN LI GLC
Sbjct: 307 SH-GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLL 365
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
A+ + M+ Q LP+I + ++ M+ + E+ L++
Sbjct: 366 SRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKN 412
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 153/350 (43%), Gaps = 24/350 (6%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVD---NSCGWEVKSRVHALNLLMYALCGKGRSDLALQI 173
++NT+++ M E A + D N C + + L L+ CG R A+++
Sbjct: 211 TYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYT-VLVELVCRYCGSAR---AIEV 266
Query: 174 FQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLD 233
++M +GCYP+ +Y L+ C G L E S+ I G + V Y TLL
Sbjct: 267 LEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVA----SVIQHILSHGLELNTVTYNTLLH 322
Query: 234 ALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV 293
+LC ++E EIL+ + + YN L C R + ++ L + +
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCK-ARLLSRAIDFFYQMLEQKCL 381
Query: 294 PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV 353
P + +YN + + E +D+A +++ +++ P + + + L K + +A+++
Sbjct: 382 PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Query: 354 IEEDMVAVNCLPN-----SEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
+ M+ P+ S +Y NL V + VL K + G TY +
Sbjct: 442 YHQ-MLDAGIFPDDITRRSLIYGFCRANL--VEEAGQVL----KETSNRGNGIRGSTYRL 494
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAV 458
+++ LC+++ A +++E M P Y +++KG+ +G EAV
Sbjct: 495 VIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 157/392 (40%), Gaps = 18/392 (4%)
Query: 9 LTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVI 68
TP + +++R K A+ F + Y HN Y I + G +MR +
Sbjct: 642 FTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLF 701
Query: 69 EQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSE 128
+MR+ C +A I Y GL + AI FK + + + +F L+ ++ +
Sbjct: 702 YEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEK 761
Query: 129 D--RLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNR 186
+E A F + V R + L LC G + A + G +P
Sbjct: 762 KGRNVEEATRTFREMIRSGFVPDRELVQDYLG-CLCEVGNTKDAKSCLDSLGKIG-FPVT 819
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE----DIVVYRTLLDALCEDGKFE 242
+Y+I ++ LC G+L EA L S GE D Y +++ L + G +
Sbjct: 820 VAYSIYIRALCRIGKLEEALSELASF--------EGERSLLDQYTYGSIVHGLLQRGDLQ 871
Query: 243 EAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAM 302
+A++ ++ + G K Y L + + + +E + + PS+ +Y AM
Sbjct: 872 KALDKVNSMKEIGTKPGVHVYTSLIVYFFKE-KQLEKVLETCQKMEGESCEPSVVTYTAM 930
Query: 303 AVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVN 362
S K++EA M++RG P + + LC+ + ++A+K++ E M+
Sbjct: 931 ICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSE-MLDKG 989
Query: 363 CLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
P++ + + L G +L K S
Sbjct: 990 IAPSTINFRTVFYGLNREGKHDLARIALQKKS 1021
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 147/340 (43%), Gaps = 8/340 (2%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+ +IS+ G + ++G+ V E+MR+ E T + I AG D A+ +K +
Sbjct: 226 TWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEM 285
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGR 166
+ +++ LL + ++++ + D E+ S A L+ + C G+
Sbjct: 286 MEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEI-SEHDAFGYLLKSFCVSGK 344
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
AL++ +E+ + + + IL+KGLC R+ +A ++ I ++ +D
Sbjct: 345 IKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV-----DIMKRRKLDDSN 399
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
VY ++ +A+E I + G Y + + + E L +E
Sbjct: 400 VYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEI-MQHLFKLKQFEKGCNLFNE 458
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
+ G P + A+ ++++ EA KV M+++G KPT + V LC+ SR
Sbjct: 459 MIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSR 518
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAV 386
DE IK+ + M A + ++++ ++ ++ G +
Sbjct: 519 YDEIIKIFNQ-MHASKIVIRDDIFSWVISSMEKNGEKEKI 557
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/444 (20%), Positives = 170/444 (38%), Gaps = 111/444 (25%)
Query: 19 RTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCEC 78
R K P A+ FN K + ++H +Y TM+SI G + L + +++ +M ++ C+
Sbjct: 164 RCFKVPHLAMRFFNWVKQK-DGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDK 222
Query: 79 KDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF 138
+ I++Y A + + + +F+ + +
Sbjct: 223 DIRTWTILISVYGKAKKIGKGLLVFEKMRK------------------------------ 252
Query: 139 VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
G+E+ + A N+++ +LC GR DLAL+ ++EM +G +Y +L+ +
Sbjct: 253 ----SGFELDA--TAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAK 306
Query: 199 DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSK-------- 250
++ + M RI + + + LL + C GK +EA+E++ +
Sbjct: 307 SEKVDVVQSIADDMV-RICEISEHD---AFGYLLKSFCVSGKIKEALELIRELKNKEMCL 362
Query: 251 ------ILRKGLKAPKRCYNRLDLSQCSDGRDIEGT-----------------KRLIHEA 287
IL KGL R + L++ R ++ + K L
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFE 422
Query: 288 LIK--GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
+IK G P +S+Y + L+ + ++ + EM + G +P A VA +
Sbjct: 423 VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQN 482
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
RV EA KV + M +K G ++
Sbjct: 483 RVAEAWKV------------------------------------FSSMEEK-GIKPTWKS 505
Query: 406 YIILLEMLCRERRYLEASQLLEQM 429
Y I ++ LCR RY E ++ QM
Sbjct: 506 YSIFVKELCRSSRYDEIIKIFNQM 529
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 169/443 (38%), Gaps = 81/443 (18%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+ H+ Y +M+SIL + + M V+E+M +T F A+ +A A +A+
Sbjct: 191 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKERKKAV 249
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
+F+ + ++ + K V +N L+ +
Sbjct: 250 GIFELMKKY------------------------------------KFKIGVETINCLLDS 273
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
L G+ + Q+ + + PN +Y +L+ G C L EA + M +G
Sbjct: 274 L-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI----DQG 328
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
DIV + +L+ L K +AI
Sbjct: 329 LKPDIVAHNVMLEGLLRSRKKSDAI----------------------------------- 353
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+L H KG P++ SY M D +S ++ A + +M D G +P A++ +
Sbjct: 354 -KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
++D ++++E M P+ + YN L+K + N NKM +
Sbjct: 413 FGTQKKLDTVYELLKE-MQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN-EIE 470
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
T+ ++++ R Y + E+M K P +SY LI+GL G+ EA +
Sbjct: 471 PSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRY 530
Query: 461 LEDMISQG-KLPEISVWKSLASL 482
LE+M+ +G K P I K A
Sbjct: 531 LEEMLDKGMKTPLIDYNKFAADF 553
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 125/301 (41%), Gaps = 8/301 (2%)
Query: 201 RLHEATHLLYSMF-WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAP 259
R A + F W ++G D Y +++ L + +FE + +L ++ KGL
Sbjct: 170 RFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM 229
Query: 260 KRCYNRLD-LSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKV 318
+ + + + + G L+ + K V +++ +D +K+ + +V
Sbjct: 230 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCL----LDSLGRAKLGKEAQV 285
Query: 319 IVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLR 378
+ + F P + + C+V + EA + I DM+ P+ +N++L+ L
Sbjct: 286 LFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAAR-IWNDMIDQGLKPDIVAHNVMLEGLL 344
Query: 379 NVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCA 438
+ ++ + M K C R +Y I++ C++ A + + M P A
Sbjct: 345 RSRKKSDAIKLFHVMKSKGPCPNVR-SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 439 DSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNR 498
Y LI G + + L++M +G P+ + +L L N +M + ++ I+N+
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
Query: 499 L 499
+
Sbjct: 464 M 464
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 14 LSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQ 73
L ++R++K A+ +F+ KS+ P N Y MI + + + M
Sbjct: 340 LEGLLRSRKKS-DAIKLFHVMKSKGP--CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 396
Query: 74 DSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEA 133
+ V+ I + +D L K + + +++N L+++M ++ E
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEH 456
Query: 134 AHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILM 193
A ++ + E++ +H N++M + ++ +++EM +G P+ +SY +L+
Sbjct: 457 ATRIY-NKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLI 515
Query: 194 KGLCHDGRLHEATHLLYSM 212
+GL +G+ EA L M
Sbjct: 516 RGLIGEGKSREACRYLEEM 534
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 7/249 (2%)
Query: 253 RKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKI 312
R+G R YN + +S + R E ++ E KG + ++ ++ +A+ ++ +K
Sbjct: 188 RQGFAHDSRTYNSM-MSILAKTRQFETMVSVLEEMGTKGLL-TMETFT-IAMKAFAAAKE 244
Query: 313 DEADKVIVE-MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
+ I E M+ FK + +L + EA + D + PN Y
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF--DKLKERFTPNMMTYT 302
Query: 372 ILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSI 431
+LL V N N M + G D + ++LE L R R+ +A +L M
Sbjct: 303 VLLNGWCRVRNLIEAARIWNDMIDQ-GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS 361
Query: 432 KSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKA 491
K P SY +I+ C A+ + +DM+ G P+ +V+ L + F + +
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 492 SSEIFNRLR 500
E+ ++
Sbjct: 422 VYELLKEMQ 430
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 178/436 (40%), Gaps = 13/436 (2%)
Query: 64 MRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQ 123
M+D+ E R D +TVF+ I+ V+ A+ L + QF +LL+
Sbjct: 187 MKDLFET-RIDR-RVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLK 244
Query: 124 IMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCY 183
++ LE A FV++ L+L + C G D ++ M + G
Sbjct: 245 EILRVHGLELARE-FVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIR 303
Query: 184 PNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEE 243
P+ ++ + + LC G L EAT +L+ ++ G +D V +++D C+ GK EE
Sbjct: 304 PDIVAFTVFIDKLCKAGFLKEATSVLF----KLKLFGISQDSVSVSSVIDGFCKVGKPEE 359
Query: 244 AIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMA 303
AI+++ L+ Y+ + CS G D+ + E G +P Y M
Sbjct: 360 AIKLIHSF---RLRPNIFVYSSFLSNICSTG-DMLRASTIFQEIFELGLLPDCVCYTTMI 415
Query: 304 VDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
+ + D+A + + G P+ + A + + +A V +M
Sbjct: 416 DGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR-NMKTEGL 474
Query: 364 LPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
+ YN L+ V E +++M + G + D TY IL+ + EA+
Sbjct: 475 KLDVVTYNNLMHGYGKTHQLNKVFELIDEM-RSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
+++ ++ + + P ++ +I G G EA + M P++ +L +
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 484 CNLEMMKASSEIFNRL 499
C + M+ + +FN+L
Sbjct: 594 CKAQRMEKAIVLFNKL 609
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 164/441 (37%), Gaps = 54/441 (12%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N V + I + G + +++ M+ F I+ AG + EA ++
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 104 KNIPQF----NCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+ F + V+ + + ++ E+ ++ H + ++ + + +
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS--------FRLRPNIFVYSSFLS 381
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
+C G A IFQE+ G P+ Y ++ G C+ GR +A + F + +
Sbjct: 382 NICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA----FQYFGALLKS 437
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
GN + L+ A G +A + + +GLK YN L + +
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL-MHGYGKTHQLNK 496
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
LI E G P +++YN + + IDEA+++I E+ RGF P+ F +
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
K EA ++ M + P+ V C
Sbjct: 557 GFSKRGDFQEAF-ILWFYMADLRMKPDV-----------------------------VTC 586
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVM 459
+A LL C+ +R +A L ++ P YN+LI G CS+G +A
Sbjct: 587 SA-------LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACE 639
Query: 460 WLEDMISQGKLPEISVWKSLA 480
+ M+ +G LP S +L
Sbjct: 640 LIGLMVQRGMLPNESTHHALV 660
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 178/436 (40%), Gaps = 13/436 (2%)
Query: 64 MRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQ 123
M+D+ E R D +TVF+ I+ V+ A+ L + QF +LL+
Sbjct: 187 MKDLFET-RIDR-RVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLK 244
Query: 124 IMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCY 183
++ LE A FV++ L+L + C G D ++ M + G
Sbjct: 245 EILRVHGLELARE-FVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIR 303
Query: 184 PNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEE 243
P+ ++ + + LC G L EAT +L+ ++ G +D V +++D C+ GK EE
Sbjct: 304 PDIVAFTVFIDKLCKAGFLKEATSVLF----KLKLFGISQDSVSVSSVIDGFCKVGKPEE 359
Query: 244 AIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMA 303
AI+++ L+ Y+ + CS G D+ + E G +P Y M
Sbjct: 360 AIKLIHSF---RLRPNIFVYSSFLSNICSTG-DMLRASTIFQEIFELGLLPDCVCYTTMI 415
Query: 304 VDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
+ + D+A + + G P+ + A + + +A V +M
Sbjct: 416 DGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR-NMKTEGL 474
Query: 364 LPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
+ YN L+ V E +++M + G + D TY IL+ + EA+
Sbjct: 475 KLDVVTYNNLMHGYGKTHQLNKVFELIDEM-RSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
+++ ++ + + P ++ +I G G EA + M P++ +L +
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 484 CNLEMMKASSEIFNRL 499
C + M+ + +FN+L
Sbjct: 594 CKAQRMEKAIVLFNKL 609
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 164/441 (37%), Gaps = 54/441 (12%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N V + I + G + +++ M+ F I+ AG + EA ++
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 104 KNIPQF----NCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+ F + V+ + + ++ E+ ++ H + ++ + + +
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS--------FRLRPNIFVYSSFLS 381
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
+C G A IFQE+ G P+ Y ++ G C+ GR +A + F + +
Sbjct: 382 NICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA----FQYFGALLKS 437
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
GN + L+ A G +A + + +GLK YN L + +
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL-MHGYGKTHQLNK 496
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
LI E G P +++YN + + IDEA+++I E+ RGF P+ F +
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
K EA ++ M + P+ V C
Sbjct: 557 GFSKRGDFQEAF-ILWFYMADLRMKPDV-----------------------------VTC 586
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVM 459
+A LL C+ +R +A L ++ P YN+LI G CS+G +A
Sbjct: 587 SA-------LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACE 639
Query: 460 WLEDMISQGKLPEISVWKSLA 480
+ M+ +G LP S +L
Sbjct: 640 LIGLMVQRGMLPNESTHHALV 660
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 140/337 (41%), Gaps = 45/337 (13%)
Query: 47 VYATMISILGTSGRLGEMRDVIE-QMRQDSCECKDTVFASAINIYANAGLVDEAITLFKN 105
+Y+ I L + + + +V++ Q + D + +D V + +Y +G+ + A LF
Sbjct: 89 LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIML-LYGYSGMAEHAHKLFDE 147
Query: 106 IPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKG 165
+P+ NC +SFN LL V+ +L+ A F + + + N ++ ALC KG
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGN-GED 224
D L IF+E++ G P+ S+ L++ E + W + + N +
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI-----WDLMKSKNLSPN 262
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
I Y + + L + KF +A+ ++ + +G+
Sbjct: 263 IRSYNSRVRGLTRNKKFTDALNLIDVMKTEGIS--------------------------- 295
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
P + +YNA+ ++ ++E K EM+++G P + + LCK
Sbjct: 296 ---------PDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKK 346
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
+D A++V EE + L +Y +++ L G
Sbjct: 347 GDLDRAVEVSEE-AIKHKLLSRPNMYKPVVERLMGAG 382
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 132/330 (40%), Gaps = 56/330 (16%)
Query: 156 LLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWR 215
+L+Y G ++ A ++F EM C S+ L+ + +L EA F
Sbjct: 129 MLLYGYSG--MAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMK----TFKE 182
Query: 216 ISQK-GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
+ +K G D+V Y T++ ALC G ++ + I ++ + G +
Sbjct: 183 LPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFE----------------- 225
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
P L S+N + + Y E D++ M+ + P +
Sbjct: 226 -------------------PDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
++V L + + +A+ +I+ M P+ YN L+ R N V++ N+M
Sbjct: 267 NSRVRGLTRNKKFTDALNLIDV-MKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMK 325
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
+K G T D TY +L+ +LC++ A ++ E+ + Y +++ L G+
Sbjct: 326 EK-GLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKI 384
Query: 455 YEAVMWLEDMISQGK-------LPEISVWK 477
EA ++ GK LP++S K
Sbjct: 385 DEATQ----LVKNGKLQSYFRYLPDLSAGK 410
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Query: 306 LYSESKIDE-ADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
LY S + E A K+ EM + + T F A ++A ++DEA+K +E +
Sbjct: 131 LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGIT 190
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
P+ YN ++K L G+ +L ++ K G D ++ LLE R ++E +
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELEKN-GFEPDLISFNTLLEEFYRRELFVEGDR 249
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF- 483
+ + M K+ P SYNS ++GL + +A+ ++ M ++G P++ + +L + +
Sbjct: 250 IWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYR 309
Query: 484 --CNL-EMMKASSEI 495
NL E+MK +E+
Sbjct: 310 VDNNLEEVMKCYNEM 324
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 160/353 (45%), Gaps = 12/353 (3%)
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
VHALN M L D ++++EMD G N +++ +++ C + +L EA
Sbjct: 183 VHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEA----L 238
Query: 211 SMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSK--ILRKGLKAPKRC-YNRLD 267
S+F+R+ + G ++V + ++D C+ G A+++L K ++ +P YN +
Sbjct: 239 SVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVI 298
Query: 268 LSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSES-KIDEADKVIVEMQDRG 326
C GR ++ +R+ + + G + +Y A+ VD Y + DEA ++ EM +G
Sbjct: 299 NGFCKAGR-LDLAERIRGDMVKSGVDCNERTYGAL-VDAYGRAGSSDEALRLCDEMTSKG 356
Query: 327 FKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAV 386
I+ + V L ++ A+ V+ DM + N + I+++ L G
Sbjct: 357 LVVNTVIYNSIVYWLFMEGDIEGAMSVL-RDMNSKNMQIDRFTQAIVVRGLCRNGYVKEA 415
Query: 387 LESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIK 446
+E ++S+K D + L+ R+++ A Q+L M ++ A S+ +LI
Sbjct: 416 VEFQRQISEK-KLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLID 474
Query: 447 GLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
G G+ A+ + MI K + ++ S+ + M A+ + N +
Sbjct: 475 GYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM 527
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 159/354 (44%), Gaps = 27/354 (7%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQD----SCECKDTVFASAINIYANAGLVDEA 99
N Y ++I+ +GRL D+ E++R D +C + + + ++ Y AG DEA
Sbjct: 290 NAVTYNSVINGFCKAGRL----DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEA 345
Query: 100 ITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLM 158
+ L + V T +N+++ + E +E A + D NS ++ A +++
Sbjct: 346 LRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQA--IVV 403
Query: 159 YALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQ 218
LC G A++ +++ + + + LM D +L A +L SM
Sbjct: 404 RGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLV---- 459
Query: 219 KGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL--DLSQCSDGRD 276
+G D + + TL+D ++GK E A+EI +++ + YN + LS+ R
Sbjct: 460 QGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSK----RG 515
Query: 277 IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAI--F 334
+ G + A+ + + +YN + + ++EAD ++ +MQ + + + ++ F
Sbjct: 516 MAGAAEAVVNAM---EIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTF 572
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLE 388
+ LCK ++A +V++ MV +P+S Y L+ + + V+E
Sbjct: 573 NIMINHLCKFGSYEKAKEVLKF-MVERGVVPDSITYGTLITSFSKHRSQEKVVE 625
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 5/213 (2%)
Query: 271 CSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
C+ D +G +I + +G S+ + N L + ++ID KV EM G+
Sbjct: 158 CTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVEN 217
Query: 331 RAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESL 390
F + + CK S++ EA+ V M+ PN +N+++ G+ L+ L
Sbjct: 218 VNTFNLVIYSFCKESKLFEALSVFYR-MLKCGVWPNVVSFNMMIDGACKTGDMRFALQLL 276
Query: 391 NKMSKKVG--CTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCAD-SYNSLIKG 447
KM G + + TY ++ C+ R L+ ++ + +KS C + +Y +L+
Sbjct: 277 GKMGMMSGNFVSPNAVTYNSVINGFCKAGR-LDLAERIRGDMVKSGVDCNERTYGALVDA 335
Query: 448 LCSLGRQYEAVMWLEDMISQGKLPEISVWKSLA 480
G EA+ ++M S+G + ++ S+
Sbjct: 336 YGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV 368
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 169/443 (38%), Gaps = 81/443 (18%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+ H+ Y +M+SIL + + M V+E+M +T F A+ +A A +A+
Sbjct: 190 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKERKKAV 248
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
+F+ + ++ + K V +N L+ +
Sbjct: 249 GIFELMKKY------------------------------------KFKIGVETINCLLDS 272
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
L G+ + Q+ + + PN +Y +L+ G C L EA + M G
Sbjct: 273 L-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI----DHG 327
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
DIV + +L+ L K +AI
Sbjct: 328 LKPDIVAHNVMLEGLLRSMKKSDAI----------------------------------- 352
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+L H KG P++ SY M D +S ++ A + +M D G +P A++ +
Sbjct: 353 -KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
++D ++++E M P+ + YN L+K + N NKM +
Sbjct: 412 FGTQKKLDTVYELLKE-MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN-EIE 469
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
T+ ++++ R Y + ++M K P +SY LI+GL S G+ EA +
Sbjct: 470 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 529
Query: 461 LEDMISQG-KLPEISVWKSLASL 482
LE+M+ +G K P I K A
Sbjct: 530 LEEMLDKGMKTPLIDYNKFAADF 552
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 124/301 (41%), Gaps = 8/301 (2%)
Query: 201 RLHEATHLLYSMF-WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAP 259
R A + F W ++G D Y +++ L + +FE + +L ++ KGL
Sbjct: 169 RFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM 228
Query: 260 KRCYNRLD-LSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKV 318
+ + + + + G L+ + K V +++ +D +K+ + +V
Sbjct: 229 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCL----LDSLGRAKLGKEAQV 284
Query: 319 IVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLR 378
+ + F P + + C+V + EA + I DM+ P+ +N++L+ L
Sbjct: 285 LFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAAR-IWNDMIDHGLKPDIVAHNVMLEGLL 343
Query: 379 NVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCA 438
+ ++ + M K C R +Y I++ C++ A + + M P A
Sbjct: 344 RSMKKSDAIKLFHVMKSKGPCPNVR-SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 402
Query: 439 DSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNR 498
Y LI G + + L++M +G P+ + +L L N +M + + I+N+
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 462
Query: 499 L 499
+
Sbjct: 463 M 463
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 6/200 (3%)
Query: 14 LSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQ 73
L ++R+ K A+ +F+ KS+ P N Y MI + + + M
Sbjct: 339 LEGLLRSMKKS-DAIKLFHVMKSKGP--CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 395
Query: 74 DSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEA 133
+ V+ I + +D L K + + +++N L+++M ++ E
Sbjct: 396 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE- 454
Query: 134 AHGLFVDNS-CGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAIL 192
HG + N E++ +H N++M + ++ ++ EM +G P+ +SY +L
Sbjct: 455 -HGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 513
Query: 193 MKGLCHDGRLHEATHLLYSM 212
++GL +G+ EA L M
Sbjct: 514 IRGLISEGKSREACRYLEEM 533
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 163/394 (41%), Gaps = 53/394 (13%)
Query: 138 FVDNSCGWEVKSRVHALNL---LMYALCGKGRSDLALQIFQEMDYQG------------- 181
F+D S G+E S H+L L L+ GR+D+ALQ F M ++G
Sbjct: 168 FLDRSVGFE--SCRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLN 225
Query: 182 ------CYPNRD---------------SYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
C+ + D +++IL+K C G+L EA L ++ G
Sbjct: 226 ALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPN-DPAG 284
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
G + + L+DALC KF+EA ++L +I G R YN + G
Sbjct: 285 CGSGLGI---LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPA 341
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
L + ++G + YN+M L E+ +D ++ EM RG P + A +
Sbjct: 342 DFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCF 401
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL---RNVGNSAAVLESLNKMSKKV 397
CK VDEA+++ + P + YN L+ L +V + VL+ +
Sbjct: 402 FCKAGFVDEALELYRS-RSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFL 460
Query: 398 GCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEA 457
G +T+ L LC + + A +L+ + + P + +I LC +G+ +A
Sbjct: 461 GG----KTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDA 516
Query: 458 VMWLEDMISQGKLPEISVWKSLASLFCNLEMMKA 491
+M E G ++ SL ++ ++ +M+
Sbjct: 517 LMINELFNKSGVDTSFKMFTSL--IYGSITLMRG 548
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/462 (20%), Positives = 182/462 (39%), Gaps = 19/462 (4%)
Query: 45 GPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFK 104
G ++ L + + E ++++++ D + I AG ++ +
Sbjct: 286 GSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQ 345
Query: 105 NI-PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCG 163
I P C +N+++ ++ E+ L+ + + + V +N + C
Sbjct: 346 KISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRG-VSPNKKTMNAALCFFCK 404
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
G D AL++++ G P SY L+ LC + + +A +L R G
Sbjct: 405 AGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGK- 463
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
+ TL +ALC GK + A E++ + L PKR +S D +E +
Sbjct: 464 ---TFSTLTNALCWKGKPDMARELVIAAAERDL-LPKRIAGCKIISALCDVGKVEDA-LM 518
Query: 284 IHEALIKGSV-PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
I+E K V S + ++ + + D A K+I+ MQ++G+ PTR+++ + +C
Sbjct: 519 INELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVC 578
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTAD 402
++ ++ + YN+ ++ G + M + G T
Sbjct: 579 EMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRD-GITPT 637
Query: 403 RETYIILLEMLCRERRYLEA----SQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAV 458
+ I++L+ + + +A L EQ K Y +I GLC + +A+
Sbjct: 638 VASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-----YQVMIVGLCKANKLDDAM 692
Query: 459 MWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+LE+M +G P I ++ CN E + + N R
Sbjct: 693 HFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFR 734
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 102/496 (20%), Positives = 201/496 (40%), Gaps = 77/496 (15%)
Query: 8 VLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDV 67
V+T + + Q++R N + F + Y H+G Y M+ +LG M ++
Sbjct: 129 VVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWEL 188
Query: 68 IEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVS 127
+ +M ++ E K +TL + + +++ +
Sbjct: 189 VNEMNKNE-ESK-------------------LVTL-------------DTMSKVMRRLAK 215
Query: 128 EDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRD 187
+ A F++ + VK+ A+N LM AL + + A ++F ++ + P+
Sbjct: 216 SGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDAR 274
Query: 188 SYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEI 247
++ IL+ G C + +A ++ M ++++ D+V Y + ++A C++G F E+
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLM--KVTE--FTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 248 LSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLY 307
L ++ G C+ P++ +Y + L
Sbjct: 331 LEEMRENG---------------CN---------------------PNVVTYTIVMHSLG 354
Query: 308 SESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNS 367
++ EA V +M++ G P + + + L K R +A ++ E DM +
Sbjct: 355 KSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE-DMTNQGVRRDV 413
Query: 368 EVYNILLKNLRNVGNSAAVLESLNKMSKKVG--CTADRETYIILLEMLCRERRYLEASQL 425
VYN ++ + L L +M + G C+ + ETY LL+M C +++ L
Sbjct: 414 LVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGIL 473
Query: 426 LEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCN 485
L M +Y LI+GLC G+ EA ++ E+ + +G +P S K L
Sbjct: 474 LHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEK 533
Query: 486 LEMMKASSEIFNRLRS 501
M +A +I + ++S
Sbjct: 534 KNMAEAKLKIQSLVQS 549
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 168/443 (37%), Gaps = 81/443 (18%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+ H Y +M+SIL + + M V+E+M +T F A+ +A A +A+
Sbjct: 191 FAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKERKKAV 249
Query: 101 TLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
+F+ + ++ + K V +N L+ +
Sbjct: 250 GIFELMKKY------------------------------------KFKIGVETINCLLDS 273
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
L G+ + Q+ + + PN +Y +L+ G C L EA + M G
Sbjct: 274 L-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI----DHG 328
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
DIV + +L+ L K +AI
Sbjct: 329 LKPDIVAHNVMLEGLLRSMKKSDAI----------------------------------- 353
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+L H KG P++ SY M D +S ++ A + +M D G +P A++ +
Sbjct: 354 -KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
++D ++++E M P+ + YN L+K + N NKM +
Sbjct: 413 FGTQKKLDTVYELLKE-MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN-EIE 470
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
T+ ++++ R Y + ++M K P +SY LI+GL S G+ EA +
Sbjct: 471 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 530
Query: 461 LEDMISQG-KLPEISVWKSLASL 482
LE+M+ +G K P I K A
Sbjct: 531 LEEMLDKGMKTPLIDYNKFAADF 553
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 123/301 (40%), Gaps = 8/301 (2%)
Query: 201 RLHEATHLLYSMF-WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAP 259
R A + F W ++G Y +++ L + +FE + +L ++ KGL
Sbjct: 170 RFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM 229
Query: 260 KRCYNRLD-LSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKV 318
+ + + + + G L+ + K V +++ +D +K+ + +V
Sbjct: 230 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCL----LDSLGRAKLGKEAQV 285
Query: 319 IVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLR 378
+ + F P + + C+V + EA + I DM+ P+ +N++L+ L
Sbjct: 286 LFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAAR-IWNDMIDHGLKPDIVAHNVMLEGLL 344
Query: 379 NVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCA 438
+ ++ + M K C R +Y I++ C++ A + + M P A
Sbjct: 345 RSMKKSDAIKLFHVMKSKGPCPNVR-SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 439 DSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNR 498
Y LI G + + L++M +G P+ + +L L N +M + + I+N+
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463
Query: 499 L 499
+
Sbjct: 464 M 464
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 86/201 (42%), Gaps = 6/201 (2%)
Query: 14 LSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQ 73
L ++R+ K A+ +F+ KS+ P N Y MI + + + M
Sbjct: 340 LEGLLRSMKKS-DAIKLFHVMKSKGP--CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 396
Query: 74 DSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEA 133
+ V+ I + +D L K + + +++N L+++M ++ E
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE- 455
Query: 134 AHGLFVDNS-CGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAIL 192
HG + N E++ +H N++M + ++ ++ EM +G P+ +SY +L
Sbjct: 456 -HGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 514
Query: 193 MKGLCHDGRLHEATHLLYSMF 213
++GL +G+ EA L M
Sbjct: 515 IRGLISEGKSREACRYLEEML 535
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 146/358 (40%), Gaps = 59/358 (16%)
Query: 18 IRTQKNPMKALHIFNEAKSRYPKYTHNGPV---YATMISI--LGTSGRLGEMRDVIEQMR 72
+R + +P KAL I+ PV YA +++ L R ++ +IE +
Sbjct: 40 LRKEHDPDKALKIYANVSDH-----SASPVSSRYAQELTVRRLAKCRRFSDIETLIESHK 94
Query: 73 QDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLE 132
D ++ +++ I Y A + + A+ F+ + Q+ SFN LL
Sbjct: 95 NDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALL---------- 144
Query: 133 AAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMD--YQGCYPNRDSYA 190
N+C +H+ N D Q+F E+ Y P++ SY
Sbjct: 145 --------NAC-------LHSKNF-----------DKVPQLFDEIPQRYNKIIPDKISYG 178
Query: 191 ILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI--VVYRTLLDALCEDGKFEEAIEIL 248
IL+K C G +A ++ M +G G ++ + + T+L +L + G+ E A +
Sbjct: 179 ILIKSYCDSGTPEKAIEIMRQM------QGKGMEVTTIAFTTILSSLYKKGELEVADNLW 232
Query: 249 SKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYS 308
+++++KG + YN +S + E K LI E G P SYN +
Sbjct: 233 NEMVKKGCELDNAAYNVRIMS--AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCE 290
Query: 309 ESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPN 366
+DEA KV ++ P A F + LC SR+ E I + V ++ +P+
Sbjct: 291 RGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLC-YSRLYEQGYAIFKKSVYMHKIPD 347
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 6/233 (2%)
Query: 22 KNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDT 81
KN K +F+E RY K + Y +I SG + +++ QM+ E
Sbjct: 151 KNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTI 210
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN 141
F + ++ G ++ A L+ + + C ++N ++IM ++ ++
Sbjct: 211 AFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYN--VRIMSAQKESPERVKELIEE 268
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
+K + N LM A C +G D A ++++ ++ C PN ++ L+ LC+ R
Sbjct: 269 MSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCY-SR 327
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRK 254
L+E Y++F + D + L+ L E+ K ++A ++ + +K
Sbjct: 328 LYEQG---YAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 116/292 (39%), Gaps = 20/292 (6%)
Query: 46 PVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKN 105
P Y+T+I G + EQM Q F + +N ++ D+ LF
Sbjct: 103 PFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDE 162
Query: 106 IPQ-FNCVNWTQ-SFNTLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLMYALC 162
IPQ +N + + S+ L++ E A + G EV + A ++ +L
Sbjct: 163 IPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTT--IAFTTILSSLY 220
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
KG ++A ++ EM +GC + +Y + + E+ + + +S G
Sbjct: 221 KKGELEVADNLWNEMVKKGCELDNAAYNVRIMSA-----QKESPERVKELIEEMSSMGLK 275
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK----APKRCYNRLDLSQCSDGRDIE 278
D + Y L+ A CE G +EA K + +GL+ AP R + R E
Sbjct: 276 PDTISYNYLMTAYCERGMLDEA-----KKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYE 330
Query: 279 GTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
+ +++ +P ++ + V L K D+A K ++ + F P+
Sbjct: 331 QGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDA-KGLIRTVKKKFPPS 381
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Query: 309 ESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSE 368
+S I +V+ M + G +P + + V +LC+ RVDEA +++E + + P++
Sbjct: 137 DSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE-LTEKHSPPDTY 195
Query: 369 VYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQ 428
YN LLK+L + V E +++M D ++ IL++ +C + EA L+ +
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 429 MSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
+ + P YN+++KG C+L + EAV + M +G P+ + +L
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 102/272 (37%), Gaps = 45/272 (16%)
Query: 184 PNRDSYAILMKGLCH--DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF 241
P R ++ IL+ C D + +L M G D V + +LCE G+
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMV----NNGLEPDQVTTDIAVRSLCETGRV 175
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV-PSLSSYN 300
+EA +++ ++ K YN L L +D+ + E V P L S+
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFL-LKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 301 AMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVA 360
+ ++ + + EA ++ ++ + GFKP ++ + C +S+ EA+ V
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVY------ 288
Query: 361 VNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYL 420
K K+ G D+ TY L+ L + R
Sbjct: 289 -------------------------------KKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 421 EASQLLEQMSIKSYWPCADSYNSLIKGLCSLG 452
EA L+ M Y P +Y SL+ G+C G
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 4/208 (1%)
Query: 67 VIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
V+ M + E A+ G VDEA L K + + + T ++N LL+ +
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 127 SEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNR 186
L + + ++VK + + +L+ +C A+ + ++ G P+
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIE 246
Y +MKG C + EA ++ ++ ++G D + Y TL+ L + G+ EEA
Sbjct: 266 FLYNTIMKGFCTLSKGSEAV----GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDG 274
L ++ G + Y L C G
Sbjct: 322 YLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 177/443 (39%), Gaps = 35/443 (7%)
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGW 145
+N+ G EA T+FK + + S+ TLL M + + + + + G
Sbjct: 52 MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGT 111
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
++ S N ++ A G + A+Q +M G P +Y L+KG G+ +
Sbjct: 112 KLDSIF--FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 206 THLLYSMFWRISQKGN---GEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC 262
+ LL M ++GN G +I + L+ A C+ K EEA E++ K+ G++
Sbjct: 170 SELLDLML----EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 263 YNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLY-SESKIDEADKVIVE 321
YN + G + ++ + ++K + V Y E ++ + + +
Sbjct: 226 YNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRR 285
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVD---------------EAIKVIEEDMVAVNCLP- 365
M++ + +F + + +V D E ++++ + V L
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTL 345
Query: 366 ----NSEVYNILLKNLRNVGNSAAVLESLNKMSK---KVGCTADRETYIILLEMLCRERR 418
N + I + N +SA +E ++ K K G D Y IL + R +
Sbjct: 346 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 405
Query: 419 YLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKS 478
+A +LLE + ++S P + ++I G CS G +A+ M G P I +++
Sbjct: 406 PKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 464
Query: 479 LASLFCNLEMMKASSEIFNRLRS 501
L + ++ + E+ +R
Sbjct: 465 LMWGYLEVKQPWKAEEVLQMMRG 487
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 174/425 (40%), Gaps = 75/425 (17%)
Query: 139 VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
V+ S V+SR +N+L+ +GR A +F+ + G P+ SY L+ +
Sbjct: 37 VEGSSCRTVRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMT- 91
Query: 199 DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA 258
+ + + S+ + Q G D + + +++A E G E+A++ L K+ GL
Sbjct: 92 ---VQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNP 148
Query: 259 PKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSV---PSLSSYNAMAVDLYSESKIDEA 315
YN L G+ E + L+ L +G+V P++ ++N + + K++EA
Sbjct: 149 TTSTYNTLIKGYGIAGKP-ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
Query: 316 DKVIVEMQDRGFKPTRAIF----------------------------EAK---------V 338
+V+ +M++ G +P + +AK V
Sbjct: 208 WEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVV 267
Query: 339 AALCKVSRVDEAIKV--------IEEDMVAVNCLPNS-----------EVYNILL----- 374
C+ RV + ++ +E ++V N L N EV LL
Sbjct: 268 GGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFN 327
Query: 375 KNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSY 434
+ + VGN ++ L M K+ AD TY ++ +A+Q+ ++M
Sbjct: 328 EEVELVGNQKMKVQVLTLM-KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGV 386
Query: 435 WPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSE 494
P A +Y+ L KG +A LE +I + + P + ++ ++ S +C+ M +
Sbjct: 387 KPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMR 445
Query: 495 IFNRL 499
+FN++
Sbjct: 446 VFNKM 450
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 107/267 (40%), Gaps = 32/267 (11%)
Query: 188 SYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEI 247
S LMK L +G + EA + F+R+ + D+ Y T+++ALC G F++A +
Sbjct: 167 SITCLMKCLGEEGFVKEAL----ATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFL 222
Query: 248 LSKILRKGLKAPKRCYNRLDL--SQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVD 305
L ++ G + P Y L S C G G ++ I
Sbjct: 223 LDQMQLPGFRYPPDTYTYTILISSYCRYGMQT-GCRKAIRR------------------- 262
Query: 306 LYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLP 365
++ EA+++ EM RGF P + + CK +R+ A+++ E DM C+P
Sbjct: 263 -----RMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFE-DMKTKGCVP 316
Query: 366 NSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQL 425
N YN ++ +E + M K TY L+ L RR EA L
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDL 376
Query: 426 LEQMSIKSYWPCADSYNSLIKGLCSLG 452
+ +M P +Y + L S G
Sbjct: 377 VVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 121/334 (36%), Gaps = 61/334 (18%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
KAL F ++ + + HN M +L + D + Q+ + K+ V +
Sbjct: 109 KALEFFFWIETHF-GFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRE-NGKNVVTTA 166
Query: 86 AINIY----ANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN 141
+I G V EA+ F + +++C
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHC------------------------------ 196
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCY--PNRDSYAILMKGLCHD 199
K V+A N ++ ALC G A + +M G P+ +Y IL+ C
Sbjct: 197 ------KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRY 250
Query: 200 G-----------RLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEIL 248
G R+ EA + M +R G D+V Y L+D C+ + A+E+
Sbjct: 251 GMQTGCRKAIRRRMWEANRMFREMLFR----GFVPDVVTYNCLIDGCCKTNRIGRALELF 306
Query: 249 SKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG-SVPSLSSYNAMAVDLY 307
+ KG + YN + S +IEG ++ G VP S+Y + L
Sbjct: 307 EDMKTKGCVPNQVTYNSF-IRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALV 365
Query: 308 SESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
+ EA ++VEM + G P ++ AL
Sbjct: 366 ETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS-KKVGCTADRET 405
V EA+ M +C P+ YN ++ L VGN L++M D T
Sbjct: 181 VKEALATFYR-MKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYT 239
Query: 406 YIILLEMLCR-----------ERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
Y IL+ CR RR EA+++ +M + + P +YN LI G C R
Sbjct: 240 YTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRI 299
Query: 455 YEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRSL 502
A+ EDM ++G +P + S + ++ + E+ ++ L
Sbjct: 300 GRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKL 347
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 102/252 (40%), Gaps = 16/252 (6%)
Query: 153 ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
++ LM L +G AL F M C P+ +Y ++ LC G +A LL M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDG-----------KFEEAIEILSKILRKGLKAPKR 261
++ D Y L+ + C G + EA + ++L +G
Sbjct: 227 --QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
YN L + C I L + KG VP+ +YN+ ++I+ A +++
Sbjct: 285 TYNCL-IDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRT 343
Query: 322 MQDRGFK-PTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNV 380
M+ G P + + + AL + R EA ++ E MV +P Y ++ L +
Sbjct: 344 MKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVE-MVEAGLVPREYTYKLVCDALSSE 402
Query: 381 GNSAAVLESLNK 392
G ++ + E L+K
Sbjct: 403 GLASTLDEELHK 414
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/531 (19%), Positives = 202/531 (38%), Gaps = 64/531 (12%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P V + + + R N KA+ +FN+ + + N + ++++ G E
Sbjct: 324 PDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRI--NCVIVSSILQCYCQMGNFSEAY 381
Query: 66 DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIM 125
D+ ++ R+ + + A + G V+EAI LF+ + ++ TL+
Sbjct: 382 DLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGC 441
Query: 126 VSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN 185
+ + A L ++ G + N+L L G + A + + M+ +G P
Sbjct: 442 CLQGKCSDAFDLMIEMD-GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPT 500
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSM------------------------FWRISQKGN 221
++ ++++GL G L +A S+ F R +
Sbjct: 501 YVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEF 560
Query: 222 GEDIVVYRTLLDALCEDGKF-EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
VY TL +LC + + +A ++L ++ + G++ K Y +L + C ++
Sbjct: 561 PLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCR-VNNVRKA 619
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+ + K VP L +Y M ++ +A + +M+ R KP + + +
Sbjct: 620 REFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Query: 341 LCKVS--RVDEAIKVIEE-------------------------DMVAVNCLPNSEVYNIL 373
++ R EA VI + DM +P+ Y +L
Sbjct: 680 DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Query: 374 LKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKS 433
LKN +L++ K D Y +L++ C+ EA ++ +QM
Sbjct: 740 LKNKPE--------RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESG 791
Query: 434 YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
P A Y +LI C +G EA M + MI G P++ + +L + C
Sbjct: 792 VDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCC 842
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 191/463 (41%), Gaps = 35/463 (7%)
Query: 45 GPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF- 103
G Y ++ L R+ + V+ M + + V+++ I + + +A+ +F
Sbjct: 291 GIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFN 350
Query: 104 ---KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYA 160
K + NCV +++LQ A+ LF + RV N+ A
Sbjct: 351 KMLKKRKRINCV----IVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRV-CYNVAFDA 405
Query: 161 LCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
L G+ + A+++F+EM +G P+ +Y L+ G C G+ +A L+ M G
Sbjct: 406 LGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM----DGTG 461
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
DIV+Y L L +G +EA E L + +G+K P + + + D +++
Sbjct: 462 KTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVK-PTYVTHNMVIEGLIDAGELDKA 520
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+ +E+L S + +S M + +D A + + ++ F ++++ +
Sbjct: 521 EAF-YESLEHKSRENDAS---MVKGFCAAGCLDHAFERFIRLE---FPLPKSVYFTLFTS 573
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLK---NLRNVGNSAAVLESLNKMSKKV 397
LC + + + M + P +Y L+ + NV + E L ++KK+
Sbjct: 574 LCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEIL--VTKKI 631
Query: 398 GCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEA 457
D TY I++ CR +A L E M + P +Y+ L+ L + E
Sbjct: 632 --VPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKRE- 688
Query: 458 VMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
M + +P++ + + + +C+L +K +F ++
Sbjct: 689 ------MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMK 725
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 145/334 (43%), Gaps = 44/334 (13%)
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
+ ALN L+ + GRSD+ + F E++ G + +Y ++++ L + E LL
Sbjct: 182 IKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLS 241
Query: 211 SMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQ 270
+ IS+ N V Y ++ LC + + A +L P R N L
Sbjct: 242 RLL--ISETRN--PCVFYLNFIEGLCLNQMTDIAYFLLQ---------PLRDANIL---- 284
Query: 271 CSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
D D+ + + +++G L E +I++A+ V+++M+ G P
Sbjct: 285 -VDKSDLG----IAYRKVVRG--------------LCYEMRIEDAESVVLDMEKHGIDPD 325
Query: 331 RAIFEAKVAALCKVSRVDEAIKVIEEDMVA---VNCLPNSEVYNILLKNLRNVGNSAAVL 387
++ A + K + +A+ V + + +NC+ S + L+ +GN +
Sbjct: 326 VYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSI----LQCYCQMGNFSEAY 381
Query: 388 ESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKG 447
+ L K ++ + DR Y + + L + + EA +L +M+ K P +Y +LI G
Sbjct: 382 D-LFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGG 440
Query: 448 LCSLGRQYEAVMWLEDMISQGKLPEISVWKSLAS 481
C G+ +A + +M GK P+I ++ LA
Sbjct: 441 CCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAG 474
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/517 (18%), Positives = 186/517 (35%), Gaps = 100/517 (19%)
Query: 82 VFASAINIYANAGLVDEAITL-FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD 140
V + + YAN + DEAI + F+ ++ N L+ M++ R + G F +
Sbjct: 148 VSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWE 207
Query: 141 -NSCGWEVKSRVHAL---------------NLLMYALCGKGRS----------DLALQIF 174
G + + + L LL L + R+ L L
Sbjct: 208 IERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQM 267
Query: 175 QEMDYQGCYPNRD------------SYAILMKGLCHDGRLHEATHLLYSM---------- 212
++ Y P RD +Y +++GLC++ R+ +A ++ M
Sbjct: 268 TDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVY 327
Query: 213 ---------------------FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKI 251
F ++ +K + V+ ++L C+ G F EA ++ +
Sbjct: 328 VYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEF 387
Query: 252 LRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK 311
+ + CYN + +E L E KG P + +Y + + K
Sbjct: 388 RETNISLDRVCYN-VAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGK 446
Query: 312 IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
+A +++EM G P I+ L EA + ++ M P +N
Sbjct: 447 CSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKM-MENRGVKPTYVTHN 505
Query: 372 ILLKNLRNVG---NSAAVLESLNKMSKK-----------VGC-------------TADRE 404
++++ L + G + A ESL S++ GC +
Sbjct: 506 MVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKS 565
Query: 405 TYIILLEMLCRERRYLEASQ-LLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLED 463
Y L LC E+ Y+ +Q LL++M P Y LI C + +A + E
Sbjct: 566 VYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEI 625
Query: 464 MISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
++++ +P++ + + + +C L K + +F ++
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMK 662
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 23/312 (7%)
Query: 47 VYATMI-SILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKN 105
VY T+ S+ + + +D++++M + E + +++ I + V +A F+
Sbjct: 566 VYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEI 625
Query: 106 IPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKG 165
+ V ++ ++ + + A+ LF D +VK V ++L+
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMK-RRDVKPDVVTYSVLL------- 677
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
SD L + +EM+ P+ Y I++ CH L + +Y++F + ++ D+
Sbjct: 678 NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKK----VYALFKDMKRREIVPDV 733
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLS-QCSDGRDIEGTKRLI 284
V Y LL E LS+ ++ P Y + + QC G D+ KR+
Sbjct: 734 VTYTVLLKNKPERN--------LSREMKAFDVKPDVFYYTVLIDWQCKIG-DLGEAKRIF 784
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
+ + G P + Y A+ + EA + M + G KP + A +A C+
Sbjct: 785 DQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRN 844
Query: 345 SRVDEAIKVIEE 356
V +A+K+++E
Sbjct: 845 GFVLKAVKLVKE 856
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 21/255 (8%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P + T T + P +A +F + K R K P T +L + L
Sbjct: 633 PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVK-----PDVVTYSVLLNSDPEL---- 683
Query: 66 DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIM 125
D+ +M + IN Y + + + LFK++ + V ++ LL+
Sbjct: 684 DMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK-N 742
Query: 126 VSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPN 185
E L F +VK V +L+ C G A +IF +M G P+
Sbjct: 743 KPERNLSREMKAF-------DVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPD 795
Query: 186 RDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAI 245
Y L+ C G L EA + F R+ + G D+V Y L+ C +G +A+
Sbjct: 796 AAPYTALIACCCKMGYLKEAKMI----FDRMIESGVKPDVVPYTALIAGCCRNGFVLKAV 851
Query: 246 EILSKILRKGLKAPK 260
+++ ++L KG+K K
Sbjct: 852 KLVKEMLEKGIKPTK 866
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 110/514 (21%), Positives = 208/514 (40%), Gaps = 49/514 (9%)
Query: 10 TPTYLSQIIRTQ------KNPM-KALHIFNEAKS--RYPKYTHNGPVYATMISILGTSGR 60
+P L Q + + +NP+ K+LH + + S R P+ T + T+I + G +GR
Sbjct: 264 SPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTST---FNTLIDLYGKAGR 320
Query: 61 LGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNT 120
L + ++ +M + F + I+ G + EA +L K + + T+++N
Sbjct: 321 LNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 121 LLQIMVSEDRLEAAH---------GLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLAL 171
LL + +EAA GLF D V R +++ LC +
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLFPDT-----VTHRA-----VLHILCQRKMVAEVE 430
Query: 172 QIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTL 231
+ EMD + S ++M+ ++G + +A ++F R D V+ T
Sbjct: 431 AVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAK----ALFERFQL-----DCVLSSTT 481
Query: 232 L----DALCEDGKFEEAIEIL-SKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
L D E G + EA + K G + YN + + + E L
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVM-IKAYGKAKLHEKALSLFKG 540
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
+G+ P +YN++ L +DEA +++ EM D G KP + A +A+ ++
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETY 406
+ +A+ + E M PN VY L+ G ++ +M ++ G ++
Sbjct: 601 LSDAVDLYEA-MEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF-RMMEEHGVQSNHIVL 658
Query: 407 IILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMIS 466
L++ + EA ++ ++M P + NS++ LG EA +
Sbjct: 659 TSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALRE 718
Query: 467 QGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+G IS + ++ L+ + M+ + E+ +R
Sbjct: 719 KGTCDVIS-FATMMYLYKGMGMLDEAIEVAEEMR 751
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 177/456 (38%), Gaps = 19/456 (4%)
Query: 49 ATMISILGTSGRLGEMRDVIEQMRQDSCECKDTV-FASAINIYANAGLVDEAITLFKNIP 107
A +I + G E V R S + D + + I Y A L ++A++LFK +
Sbjct: 483 AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMK 542
Query: 108 QFNCVNWTQ--SFNTLLQIMVSEDRLEAAHGLFVDN-SCGWEVKSRVHALNLLMYALCGK 164
N W ++N+L Q++ D ++ A + + G + + +A + Y G
Sbjct: 543 --NQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
SD A+ +++ M+ G PN Y L+ G G + EA F + + G +
Sbjct: 601 -LSD-AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQY----FRMMEEHGVQSN 654
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
+V +L+ A + G EEA + K ++ P + LS C+D I I
Sbjct: 655 HIVLTSLIKAYSKVGCLEEARRVYDK-MKDSEGGPDVAASNSMLSLCAD-LGIVSEAESI 712
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
AL + + S+ M +DEA +V EM++ G F +A
Sbjct: 713 FNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAAD 772
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
++ E ++ E +V L + + L L+ G + + L + A
Sbjct: 773 GQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPA 832
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSI-KSYWPCADSYNSLIKGLCSLGRQYEAVMWLED 463
L + LE+ Q L I + ++ +YN++I + G A+
Sbjct: 833 ITATLFSAMGLYAYALESCQELTSGEIPREHF----AYNAVIYTYSASGDIDMALKAYMR 888
Query: 464 MISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRL 499
M +G P+I L ++ M++ + +RL
Sbjct: 889 MQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRL 924
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 123/327 (37%), Gaps = 61/327 (18%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
YA MI+ G L + D+ E M + + + V+ S IN +A +G+V+EAI F+ +
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSCGWEVKSRVHALNL------- 156
+ + +L++ LE A ++ D+ G +V + L+L
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Query: 157 -----------------------LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILM 193
+MY G G D A+++ +EM G + S+ +M
Sbjct: 707 SEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM 766
Query: 194 KGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILR 253
DG+L E L + M + ++ D ++TL L + G EA+ L
Sbjct: 767 ACYAADGQLSECCELFHEM---LVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYN 823
Query: 254 --KGLKAPKRCYNRLD--------LSQCSDGRDIEGTKRLIHEALIKGSVPSLS-SYNAM 302
K L P L C + L G +P +YNA+
Sbjct: 824 EAKPLATPAITATLFSAMGLYAYALESCQE--------------LTSGEIPREHFAYNAV 869
Query: 303 AVDLYSESKIDEADKVIVEMQDRGFKP 329
+ ID A K + MQ++G +P
Sbjct: 870 IYTYSASGDIDMALKAYMRMQEKGLEP 896
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 143/341 (41%), Gaps = 34/341 (9%)
Query: 17 IIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSC 76
+++++ NP + L I + S P Y + +++ + L + +++ Q+
Sbjct: 48 LLKSENNPDRILEI-CRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQP 106
Query: 77 ECKDTVFA-SAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAH 135
+ K FA AI +Y A ++D +I F+N+ Q+ +S N LL + + A+
Sbjct: 107 DPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEAN 166
Query: 136 GLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKG 195
++++ + ++ + N ++ LC G + + I EM+ + P S+ +++ G
Sbjct: 167 RVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDG 226
Query: 196 LCHDGRLHEATHLLYSM----------FWRI------SQKGNGE---------------D 224
+ + E ++ M + I +K + E +
Sbjct: 227 FYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPN 286
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLI 284
V Y L+ C + +EA+ + ++ G K CY L C G D E L
Sbjct: 287 SVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGG-DFETALILC 345
Query: 285 HEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDR 325
E++ K VPS S + L S SK+DEA ++I ++++
Sbjct: 346 RESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 9/218 (4%)
Query: 268 LSQCSDGRDIEGTKRLIHE-ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRG 326
L C +D + R+ E + G P L +YN M L + ++ EM+ +
Sbjct: 153 LFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKW 212
Query: 327 FKPTRAIFEAKVAALCKVSRVDEAIKVIEE-DMVAVNCLPNSEVYNILLKNLRNVGNSAA 385
KPT A F + K + DE KV+ D V+ YNI+++ L SA
Sbjct: 213 IKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHV--GVATYNIMIQCLCKRKKSA- 269
Query: 386 VLESLNKMSKKVGCT--ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS 443
E+ + + C + TY +L+ C E EA L E M Y P ++ Y +
Sbjct: 270 --EAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFT 327
Query: 444 LIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLAS 481
LI LC G A++ + + + +P SV K L +
Sbjct: 328 LIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVN 365
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 196/485 (40%), Gaps = 35/485 (7%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
AL FN A ++ P Y+H+ Y ++ L S + M + +Q++ + +V+ S
Sbjct: 65 ALGFFNWA-AQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSL 123
Query: 87 INIY-------ANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFV 139
I+ + +++EA + + I C N LL + S+ + A LFV
Sbjct: 124 IDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVC-------NRLLAGLTSDGCYDYAQKLFV 176
Query: 140 DNSCGWEVKSRVHALNLLMYAL-----CGKGRSDLALQIFQEMDYQGCYPNRDSYAIL-M 193
+++ + +LN L + + C ++ L++ E+ N A+L +
Sbjct: 177 ------KMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLIL 230
Query: 194 KGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILR 253
LC R +A ++L + I K D + YR + +A G E +L K +
Sbjct: 231 HSLCKCSREMDAFYILEEL-RNIDCK---PDFMAYRVIAEAFVVTGNLYERQVVLKKKRK 286
Query: 254 KGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKID 313
G+ Y L S R E + + E ++ G P + + S D
Sbjct: 287 LGVAPRSSDYRAFILDLISAKRLTEAKE--VAEVIVSGKFPMDNDILDALIGSVSAVDPD 344
Query: 314 EADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNIL 373
A + +V M G P LC+ + D IK E + + + Y+++
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYEL-LSSKGYFSELQSYSLM 403
Query: 374 LKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKS 433
+ L G +L +M KK G D Y L+E C+ A +L ++M ++
Sbjct: 404 ISFLCKAGRVRESYTALQEM-KKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEG 462
Query: 434 YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASS 493
+YN LI+ L G E++ + M+ +G P+ +++ SL C ++A+
Sbjct: 463 CKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAM 522
Query: 494 EIFNR 498
E+F +
Sbjct: 523 EVFRK 527
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 147/345 (42%), Gaps = 14/345 (4%)
Query: 44 NGPVYATMI-SILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
NG + A +I L R + ++E++R C+ + + G + E +
Sbjct: 221 NGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVV 280
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
K + + + + ++S RL A + V + N ++ AL
Sbjct: 281 LKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEV-----AEVIVSGKFPMDNDILDALI 335
Query: 163 GKGRS---DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
G + D A++ M G P + + L K LC H+ + L + +S K
Sbjct: 336 GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCR----HDKSDHLIKAYELLSSK 391
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
G ++ Y ++ LC+ G+ E+ L ++ ++GL YN L + C I
Sbjct: 392 GYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNAL-IEACCKAEMIRP 450
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
K+L E ++G +L++YN + L E + +E+ ++ +M +RG +P I+ + +
Sbjct: 451 AKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIE 510
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSA 384
LCK ++++ A++V + M + V + + NL + G+S
Sbjct: 511 GLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSG 555
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 143/331 (43%), Gaps = 11/331 (3%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMR-QDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y +I L S +L + V+ + + + +++F I Y +G ++EAI +F I
Sbjct: 75 YRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKI 134
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDR-LEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKG 165
P F CV + N LL ++V + + LE + V +C V+ +L+ ALC G
Sbjct: 135 PNFRCVPSAYTLNALLLVLVRKRQSLELVPEILV-KACRMGVRLEESTFGILIDALCRIG 193
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLC--HDGRLHEATHLLYSMFWRISQKGNGE 223
D A ++ + M + Y+ L+ +C D + L + G +
Sbjct: 194 EVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRD 253
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
VV R L+ E G+ +E + +L+++ ++ CY + +D D +L
Sbjct: 254 YTVVMRFLV----EGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIAD-EDYPKADKL 308
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCK 343
E L+ G P + +YN L ++ I+ A K++ M G +P + + AL K
Sbjct: 309 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 368
Query: 344 VSRVDEAIKVIEEDMVAVNCLPNSEVYNILL 374
+ A K + ++M NS ++I++
Sbjct: 369 AGDLSRA-KTLWKEMETNGVNRNSHTFDIMI 398
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 124/302 (41%), Gaps = 7/302 (2%)
Query: 180 QGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDG 239
C P +Y ++K L +L + +LY + +S+K + + ++R ++ A G
Sbjct: 66 HNCEPTPQAYRFVIKTLAKSSQLENISSVLYHL--EVSEKFDTPE-SIFRDVIAAYGFSG 122
Query: 240 KFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSY 299
+ EEAIE+ KI N L L + +E ++ +A G S++
Sbjct: 123 RIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTF 182
Query: 300 NAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE--ED 357
+ L ++D A +++ M ++ ++++CK + VI ED
Sbjct: 183 GILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK-HKDSSCFDVIGYLED 241
Query: 358 MVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRER 417
+ P Y ++++ L G V+ LN+M K D Y I+L+ + +
Sbjct: 242 LRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQM-KCDRVEPDLVCYTIVLQGVIADE 300
Query: 418 RYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWK 477
Y +A +L +++ + P +YN I GLC A+ + M G P + +
Sbjct: 301 DYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYN 360
Query: 478 SL 479
L
Sbjct: 361 IL 362
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 110/259 (42%), Gaps = 45/259 (17%)
Query: 4 RWPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGT--SGRL 61
+ P TP L+ I +++P H+FN A S+ P++TH Y I LG SG+L
Sbjct: 100 KLPPRFTPEELADAITLEEDPFLCFHLFNWA-SQQPRFTHENCSYHIAIRKLGAAKSGKL 158
Query: 62 GEMRDVIEQM-RQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNT 120
++ M + EC+ T+ I LFK + + N+
Sbjct: 159 IRAVNIFRHMVNSRNLECRPTMRTYHI--------------LFKAL-------LGRGNNS 197
Query: 121 LLQIMVSEDRLEAAHGLF---VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
+ + +E LF VD+ ++ V ALN L+ KGR+ ++ EM
Sbjct: 198 FINHLY----METVRSLFRQMVDSG----IEPDVFALNCLV-----KGRTINTRELLSEM 244
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
+G PN SY L+ G + +A L W + + G D + YRTL+D C
Sbjct: 245 KGKGFVPNGKSYNSLVNAFALSGEIDDAVKCL----WEMIENGRVVDFISYRTLVDESCR 300
Query: 238 DGKFEEAIEILSKILRKGL 256
GK++EA +L + K L
Sbjct: 301 KGKYDEATRLLEMLREKQL 319
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 110/259 (42%), Gaps = 45/259 (17%)
Query: 4 RWPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGT--SGRL 61
+ P TP L+ I +++P H+FN A S+ P++TH Y I LG SG+L
Sbjct: 125 KLPPRFTPEELADAITLEEDPFLCFHLFNWA-SQQPRFTHENCSYHIAIRKLGAAKSGKL 183
Query: 62 GEMRDVIEQM-RQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNT 120
++ M + EC+ T+ I LFK + + N+
Sbjct: 184 IRAVNIFRHMVNSRNLECRPTMRTYHI--------------LFKAL-------LGRGNNS 222
Query: 121 LLQIMVSEDRLEAAHGLF---VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEM 177
+ + +E LF VD+ ++ V ALN L+ KGR+ ++ EM
Sbjct: 223 FINHLY----METVRSLFRQMVDSG----IEPDVFALNCLV-----KGRTINTRELLSEM 269
Query: 178 DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCE 237
+G PN SY L+ G + +A L W + + G D + YRTL+D C
Sbjct: 270 KGKGFVPNGKSYNSLVNAFALSGEIDDAVKCL----WEMIENGRVVDFISYRTLVDESCR 325
Query: 238 DGKFEEAIEILSKILRKGL 256
GK++EA +L + K L
Sbjct: 326 KGKYDEATRLLEMLREKQL 344
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 171/419 (40%), Gaps = 51/419 (12%)
Query: 6 PRVLTPTYLSQI-IRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEM 64
P TP+ S+I + + NP +L F + RY +H+ +T+I IL S
Sbjct: 66 PSGFTPSQFSEITLCLRNNPHLSLRFFLFTR-RYSLCSHDTHSCSTLIHILSRSRLKSHA 124
Query: 65 RDVIEQMRQDSCECKD-----TVFASAINIYANAGL-----------------VDEAITL 102
++I + + +D VF S I Y G +D A+ +
Sbjct: 125 SEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMV 184
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHG------------LFVDNSCGW--EVK 148
+ + + N L I R A++G + VD + ++K
Sbjct: 185 MRKLRSRGINAQISTCNAL--ITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIK 242
Query: 149 SRVHALNLLMYALCGKGRSDLALQIFQEMDYQ-GCYPNRDSYAILMKGLCHDGRLHEATH 207
N +M + +G +++ +I++EM+ + GC PN SY +LM+ C G + EA
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 208 LLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLD 267
+ M R G DIV Y T++ LC + + +A E+ + KG++ Y L
Sbjct: 303 VWEEMKVR----GVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLV 358
Query: 268 LSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK----IDEADKVIVEMQ 323
C G D++ + E KG + A+ L + ++ AD V ++
Sbjct: 359 NGYCKAG-DVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVR 417
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN 382
+ F P+R +E V LC+ ++D A+ I+ +MV P+ E Y + VG+
Sbjct: 418 EAMFYPSRNCYELLVKRLCEDGKMDRALN-IQAEMVGKGFKPSQETYRAFIDGYGIVGD 475
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 28/240 (11%)
Query: 250 KILRKGLKAPKRCYNR-----LDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAV 304
K+ R +K+ RC + L + C D ++I+G ++ + +G +S+ NA+
Sbjct: 146 KVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALIT 205
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
++ G+K R +F L VS VDEA K+I +
Sbjct: 206 EVSRRRG-----------ASNGYKMYREVF-----GLDDVS-VDEAKKMIGK------IK 242
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQ 424
PN+ +N ++ + G + V +M ++VGC+ + +Y +L+E C EA +
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 425 LLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
+ E+M ++ +YN++I GLCS +A DM +G ++ L + +C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 23/271 (8%)
Query: 218 QKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD- 276
++G +YR + +D +EA +++ KI K +N + +S +G
Sbjct: 210 RRGASNGYKMYREVFG--LDDVSVDEAKKMIGKI-----KPNATTFNSMMVSFYREGETE 262
Query: 277 -IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFE 335
+E R + E + G P++ SYN + + + EA+KV EM+ RG +
Sbjct: 263 MVERIWREMEEEV--GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYN 320
Query: 336 AKVAALC---KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNK 392
+ LC +V + E + + + CL Y L+ G+ + L +
Sbjct: 321 TMIGGLCSNFEVVKAKELFRDMGLKGIECTCL----TYEHLVNGYCKAGDVDSGLVVYRE 376
Query: 393 MSKKVGCTADRETYIILLEMLCRER---RYLEASQLLEQMSIKS-YWPCADSYNSLIKGL 448
M +K G AD T L+E LC +R R +EA+ +++ ++ ++P + Y L+K L
Sbjct: 377 MKRK-GFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRL 435
Query: 449 CSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
C G+ A+ +M+ +G P +++
Sbjct: 436 CEDGKMDRALNIQAEMVGKGFKPSQETYRAF 466
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 203/490 (41%), Gaps = 52/490 (10%)
Query: 1 MTIRWPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGR 60
+ +RW + ++++++ KA FN A ++ + H+ Y TM+ I G +GR
Sbjct: 83 LGVRWDSHI----INRVLKAHPPMQKAWLFFNWA-AQIKGFKHDHFTYTTMLDIFGEAGR 137
Query: 61 LGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNT 120
+ M V M++ + S I+ +++G VD A+ L++ + C S+
Sbjct: 138 IQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTA 197
Query: 121 LLQIMVSEDRLEAAHGLFVDNSCGWEVKSRV----HALNLLMYALCGKGRSDLALQIFQE 176
++++ ++ R+E A ++ + ++SRV H +LM L G+ + AL IF +
Sbjct: 198 YMKMLFADGRVEEATEVYKEM-----LRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFK 252
Query: 177 MDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
M G P++ + IL+ G T +L M K NG ++ Y ++AL
Sbjct: 253 MQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYM------KENGV-VLRYPIFVEALE 305
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT--KRLIHEALIKGSVP 294
E+ ++L ++ + C + +D + ++ D + + R+I L
Sbjct: 306 TLKAAGESDDLLREV-NSHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVL------ 358
Query: 295 SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVI 354
L N +AVD+ ++ +M+DR K + A + C R + A
Sbjct: 359 -LMKQNLVAVDI-----------LLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAF 406
Query: 355 EEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSK---KVGCTADRETYIILLE 411
+ + L S Y L+ N V+E + +M K +GC +L+
Sbjct: 407 DYSLEMGIHLKKS-AYLALIGNFLRSNELPKVIEVVKEMVKAQHSLGCYQG----AMLIH 461
Query: 412 MLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLP 471
L RR A+ + + + A Y +L+ S G +A+ L +M + +P
Sbjct: 462 RLGFGRRPRLAADVFDLLPDDQKGVAA--YTALMDVYISAGSPEKAMKILREMREREIMP 519
Query: 472 EISVWKSLAS 481
+ + L S
Sbjct: 520 SLGTYDVLLS 529
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 9/319 (2%)
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
KG ++ A+ +FQ M C P ++Y +++ + +++ + ++ +
Sbjct: 264 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASK----SYMSWKLYCEMRSHQCKP 319
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
+I Y L++A +G E+A EI ++ GL+ YN L S G G +
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPY-GAAEI 378
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKI-DEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
G P +SYN M VD Y + + +A+ V EM+ G PT ++A
Sbjct: 379 FSLMQHMGCEPDRASYNIM-VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTAD 402
K V + +++E M P++ V N +L +G + + L +M CTAD
Sbjct: 438 KARDVTKCEAIVKE-MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG-PCTAD 495
Query: 403 RETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLE 462
TY IL+ + + +L ++ K++ P ++ S I + + E
Sbjct: 496 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 555
Query: 463 DMISQGKLPEISVWKSLAS 481
+MI G P+ K L S
Sbjct: 556 EMIDSGCAPDGGTAKVLLS 574
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 155/355 (43%), Gaps = 13/355 (3%)
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
V NLL+ A K + A ++ ++ P D+YA+L+K C G + A +L
Sbjct: 177 VICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLV 236
Query: 211 SM-FWRISQKGNGEDIVVYRTLLDALCE-DGKFEEAIEILSKILRKGLKAPKRCYNRLDL 268
M +S K G + VY ++ L + G EEAI++ ++ R K YN L +
Sbjct: 237 EMQNHHVSPKTIG--VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN-LMI 293
Query: 269 SQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFK 328
+ + +L E P++ +Y A+ E ++A+++ ++Q+ G +
Sbjct: 294 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 353
Query: 329 PTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG---NSAA 385
P ++ A + + + A ++ M + C P+ YNI++ G ++ A
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSL-MQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 412
Query: 386 VLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
V E + K++G +++++LL + R + ++++MS P NS++
Sbjct: 413 VFEEM----KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 446 KGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
LG+ + L +M + +IS + L +++ ++ E+F L+
Sbjct: 469 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 523
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 152/361 (42%), Gaps = 18/361 (4%)
Query: 47 VYATMI-SILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKN 105
VY I ++ G E DV ++M++D C+ + IN+Y A + L+
Sbjct: 252 VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCE 311
Query: 106 IPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLMYALCGK 164
+ C ++ L+ E E A +F G E V+ N LM +
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE--PDVYVYNALMESYSRA 369
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
G A +IF M + GC P+R SY I++ G LH ++F + + G
Sbjct: 370 GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG-LHSDAE---AVFEEMKRLGIAPT 425
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR-LDLSQCSDGRDIEGTK-- 281
+ + LL A + + I+ ++ G++ N L+L GR + TK
Sbjct: 426 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLY----GRLGQFTKME 481
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESK-IDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+++ E +S+YN + +++Y ++ ++ +++ VE++++ F+P + +++ A
Sbjct: 482 KILAEMENGPCTADISTYNIL-INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 540
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
+ + ++V EE M+ C P+ +LL + V L M K V +
Sbjct: 541 YSRKKLYVKCLEVFEE-MIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVS 599
Query: 401 A 401
+
Sbjct: 600 S 600
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 111/269 (41%), Gaps = 10/269 (3%)
Query: 240 KFEEAIEILSKILRKGLKAPKR-CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSS 298
K++ I + ILRK P C+N L + + + L + L VP+ +
Sbjct: 156 KWDSIILVCEWILRKSSFQPDVICFNLL-IDAYGQKFQYKEAESLYVQLLESRYVPTEDT 214
Query: 299 YNAMAVDLYSESK-IDEADKVIVEMQDRGFKPTR---AIFEAKVAALCK-VSRVDEAIKV 353
Y A+ + Y + I+ A+ V+VEMQ+ P ++ A + L K +EAI V
Sbjct: 215 Y-ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 354 IEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEML 413
+ M C P +E YN+++ NL + + + L + C + TY L+
Sbjct: 274 FQR-MKRDRCKPTTETYNLMI-NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 331
Query: 414 CRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEI 473
RE +A ++ EQ+ P YN+L++ G Y A M G P+
Sbjct: 332 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 391
Query: 474 SVWKSLASLFCNLEMMKASSEIFNRLRSL 502
+ + + + + + +F ++ L
Sbjct: 392 ASYNIMVDAYGRAGLHSDAEAVFEEMKRL 420
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 9/319 (2%)
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
KG ++ A+ +FQ M C P ++Y +++ + +++ + ++ +
Sbjct: 242 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASK----SYMSWKLYCEMRSHQCKP 297
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
+I Y L++A +G E+A EI ++ GL+ YN L S G G +
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPY-GAAEI 356
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKI-DEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
G P +SYN M VD Y + + +A+ V EM+ G PT ++A
Sbjct: 357 FSLMQHMGCEPDRASYNIM-VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTAD 402
K V + +++E M P++ V N +L +G + + L +M CTAD
Sbjct: 416 KARDVTKCEAIVKE-MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG-PCTAD 473
Query: 403 RETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLE 462
TY IL+ + + +L ++ K++ P ++ S I + + E
Sbjct: 474 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 533
Query: 463 DMISQGKLPEISVWKSLAS 481
+MI G P+ K L S
Sbjct: 534 EMIDSGCAPDGGTAKVLLS 552
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 155/355 (43%), Gaps = 13/355 (3%)
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
V NLL+ A K + A ++ ++ P D+YA+L+K C G + A +L
Sbjct: 155 VICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLV 214
Query: 211 SM-FWRISQKGNGEDIVVYRTLLDALCE-DGKFEEAIEILSKILRKGLKAPKRCYNRLDL 268
M +S K G + VY ++ L + G EEAI++ ++ R K YN L +
Sbjct: 215 EMQNHHVSPKTIG--VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN-LMI 271
Query: 269 SQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFK 328
+ + +L E P++ +Y A+ E ++A+++ ++Q+ G +
Sbjct: 272 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 331
Query: 329 PTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG---NSAA 385
P ++ A + + + A ++ M + C P+ YNI++ G ++ A
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSL-MQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 390
Query: 386 VLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
V E + K++G +++++LL + R + ++++MS P NS++
Sbjct: 391 VFEEM----KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 446 KGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
LG+ + L +M + +IS + L +++ ++ E+F L+
Sbjct: 447 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 501
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 152/361 (42%), Gaps = 18/361 (4%)
Query: 47 VYATMI-SILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKN 105
VY I ++ G E DV ++M++D C+ + IN+Y A + L+
Sbjct: 230 VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCE 289
Query: 106 IPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLMYALCGK 164
+ C ++ L+ E E A +F G E V+ N LM +
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE--PDVYVYNALMESYSRA 347
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
G A +IF M + GC P+R SY I++ G LH ++F + + G
Sbjct: 348 GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG-LHSDAE---AVFEEMKRLGIAPT 403
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR-LDLSQCSDGRDIEGTK-- 281
+ + LL A + + I+ ++ G++ N L+L GR + TK
Sbjct: 404 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLY----GRLGQFTKME 459
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESK-IDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+++ E +S+YN + +++Y ++ ++ +++ VE++++ F+P + +++ A
Sbjct: 460 KILAEMENGPCTADISTYNIL-INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 518
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
+ + ++V EE M+ C P+ +LL + V L M K V +
Sbjct: 519 YSRKKLYVKCLEVFEE-MIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVS 577
Query: 401 A 401
+
Sbjct: 578 S 578
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 111/269 (41%), Gaps = 10/269 (3%)
Query: 240 KFEEAIEILSKILRKGLKAPKR-CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSS 298
K++ I + ILRK P C+N L + + + L + L VP+ +
Sbjct: 134 KWDSIILVCEWILRKSSFQPDVICFNLL-IDAYGQKFQYKEAESLYVQLLESRYVPTEDT 192
Query: 299 YNAMAVDLYSESK-IDEADKVIVEMQDRGFKPTR---AIFEAKVAALCK-VSRVDEAIKV 353
Y A+ + Y + I+ A+ V+VEMQ+ P ++ A + L K +EAI V
Sbjct: 193 Y-ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 354 IEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEML 413
+ M C P +E YN+++ NL + + + L + C + TY L+
Sbjct: 252 FQR-MKRDRCKPTTETYNLMI-NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 309
Query: 414 CRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEI 473
RE +A ++ EQ+ P YN+L++ G Y A M G P+
Sbjct: 310 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 369
Query: 474 SVWKSLASLFCNLEMMKASSEIFNRLRSL 502
+ + + + + + +F ++ L
Sbjct: 370 ASYNIMVDAYGRAGLHSDAEAVFEEMKRL 398
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 138/364 (37%), Gaps = 42/364 (11%)
Query: 18 IRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCE 77
++++++P K ++F +A + N + +S L +GRL + D++E +
Sbjct: 45 LKSERDPEKLYNLF-KANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQG 103
Query: 78 CKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGL 137
++ I +Y AG+ +A+ F N+ + C +SFN LQ++ L
Sbjct: 104 RREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEF 163
Query: 138 FVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLC 197
D + + + N+ + + C G D A +EM+ G P+ +Y L+ L
Sbjct: 164 LHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALY 223
Query: 198 HDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
HE + ++ + KG ++ + + L
Sbjct: 224 K----HERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNR------------------- 260
Query: 258 APKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADK 317
+R ++ DL +E P +YN + + D A++
Sbjct: 261 --RRAWDANDLLLLMPKLQVE---------------PDSITYNMVIKGFFLARFPDMAER 303
Query: 318 VIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL 377
V M +G+KP I++ + LCK D A + +D + PN + +LLK L
Sbjct: 304 VYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMC-KDCMRKKWYPNLDTVEMLLKGL 362
Query: 378 RNVG 381
G
Sbjct: 363 VKKG 366
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 182/457 (39%), Gaps = 15/457 (3%)
Query: 46 PVYATMISILGTSGRLGEMR---DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
P T +++ GR G+ R ++++ M + + + + + IN ++G EA+ +
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
K + + N +L S + A F + G +V+ N+++Y L
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF-ELMKGAKVRPDTTTFNIIIYCLS 294
Query: 163 GKGRSDLALQIFQEMDYQ--GCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
G+S AL +F M + C P+ ++ +M G + + +M +G
Sbjct: 295 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV----AEG 350
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
+IV Y L+ A G A+ +L I + G+ Y L L+ R
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL-LNSYGRSRQPGKA 409
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLY-SESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
K + + P++ +YNA+ +D Y S + EA ++ +M+ G KP + +
Sbjct: 410 KEVFLMMRKERRKPNVVTYNAL-IDAYGSNGFLAEAVEIFRQMEQDGIKPN-VVSVCTLL 467
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
A C S+ + + + N+ YN + + N + M KK
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK-KV 526
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVM 459
AD T+ IL+ CR +Y EA L++M S + Y+S++ G+ EA
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 586
Query: 460 WLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIF 496
M G P++ + S+ + E + E+F
Sbjct: 587 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/469 (18%), Positives = 177/469 (37%), Gaps = 82/469 (17%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P ++T + ++ + KAL F K K + + +I L G+ +
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKG--AKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 66 DVIEQMRQDSCECKDTV--FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQ 123
D+ MR+ EC+ V F S +++Y+ G ++ NC + +
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE------------NC-------RAVFE 344
Query: 124 IMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCY 183
MV+E +K + + N LM A G S AL + ++ G
Sbjct: 345 AMVAEG-----------------LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 387
Query: 184 PNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEE 243
P+ SY L+ + +A + F + ++ ++V Y L+DA +G E
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEV----FLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 244 AIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMA 303
A+EI ++ + G+K P L+ CS + ++ A +G + ++YN+
Sbjct: 444 AVEIFRQMEQDGIK-PNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 502
Query: 304 VDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
+ +++++A + M+ + K F ++ C++S+ EAI ++E
Sbjct: 503 GSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKE------- 555
Query: 364 LPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
+E L+ +E Y +L ++ + EA
Sbjct: 556 -----------------------MEDLS-------IPLTKEVYSSVLCAYSKQGQVTEAE 585
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
+ QM + P +Y S++ + + +A +M + G P+
Sbjct: 586 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPD 634
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 134/347 (38%), Gaps = 43/347 (12%)
Query: 156 LLMYALCGKGRSDLALQIFQEMDYQGCYPNR-DSYAILMKGLCHDGRLHEATHLLYSMFW 214
+L+ L +G +L + +F+ M Q Y R D Y ++++ + +A L + M
Sbjct: 112 VLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM-Q 170
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
+ S K + E Y L++A G++ A+ ++ +LR +
Sbjct: 171 KWSCKPDAE---TYDALINAHGRAGQWRWAMNLMDDMLRAAI------------------ 209
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
PS S+YN + S EA +V +M D G P
Sbjct: 210 ------------------APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTH 251
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKM- 393
++A + +A+ E M P++ +NI++ L +G S+ L+ N M
Sbjct: 252 NIVLSAYKSGRQYSKALSYFEL-MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR 310
Query: 394 SKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGR 453
K+ C D T+ ++ + + + E M + P SYN+L+ G
Sbjct: 311 EKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGM 370
Query: 454 QYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
A+ L D+ G +P++ + L + + + E+F +R
Sbjct: 371 SGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 417
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 182/457 (39%), Gaps = 15/457 (3%)
Query: 46 PVYATMISILGTSGRLGEMR---DVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
P T +++ GR G+ R ++++ M + + + + + IN ++G EA+ +
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
K + + N +L S + A F + G +V+ N+++Y L
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF-ELMKGAKVRPDTTTFNIIIYCLS 162
Query: 163 GKGRSDLALQIFQEMDYQ--GCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
G+S AL +F M + C P+ ++ +M G + + +M +G
Sbjct: 163 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV----AEG 218
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
+IV Y L+ A G A+ +L I + G+ Y L L+ R
Sbjct: 219 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL-LNSYGRSRQPGKA 277
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLY-SESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
K + + P++ +YNA+ +D Y S + EA ++ +M+ G KP + +
Sbjct: 278 KEVFLMMRKERRKPNVVTYNAL-IDAYGSNGFLAEAVEIFRQMEQDGIKPN-VVSVCTLL 335
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
A C S+ + + + N+ YN + + N + M KK
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK-KV 394
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVM 459
AD T+ IL+ CR +Y EA L++M S + Y+S++ G+ EA
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 454
Query: 460 WLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIF 496
M G P++ + S+ + E + E+F
Sbjct: 455 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 491
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/469 (18%), Positives = 177/469 (37%), Gaps = 82/469 (17%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P ++T + ++ + KAL F K K + + +I L G+ +
Sbjct: 114 PDLVTHNIVLSAYKSGRQYSKALSYFELMKG--AKVRPDTTTFNIIIYCLSKLGQSSQAL 171
Query: 66 DVIEQMRQDSCECKDTV--FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQ 123
D+ MR+ EC+ V F S +++Y+ G ++ NC + +
Sbjct: 172 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE------------NC-------RAVFE 212
Query: 124 IMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCY 183
MV+E +K + + N LM A G S AL + ++ G
Sbjct: 213 AMVAEG-----------------LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 255
Query: 184 PNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEE 243
P+ SY L+ + +A + F + ++ ++V Y L+DA +G E
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEV----FLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 244 AIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMA 303
A+EI ++ + G+K P L+ CS + ++ A +G + ++YN+
Sbjct: 312 AVEIFRQMEQDGIK-PNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 370
Query: 304 VDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNC 363
+ +++++A + M+ + K F ++ C++S+ EAI ++E
Sbjct: 371 GSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKE------- 423
Query: 364 LPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEAS 423
+E L+ +E Y +L ++ + EA
Sbjct: 424 -----------------------MEDLS-------IPLTKEVYSSVLCAYSKQGQVTEAE 453
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
+ QM + P +Y S++ + + +A +M + G P+
Sbjct: 454 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPD 502
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 2/219 (0%)
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
L+ + L PS S+YN + S EA +V +M D G P ++A
Sbjct: 68 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 127
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKM-SKKVGCTA 401
+ +A+ E M P++ +NI++ L +G S+ L+ N M K+ C
Sbjct: 128 SGRQYSKALSYFEL-MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 186
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWL 461
D T+ ++ + + + E M + P SYN+L+ G A+ L
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 462 EDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
D+ G +P++ + L + + + E+F +R
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 285
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 4/174 (2%)
Query: 312 IDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYN 371
+D+A + EMQ KP ++A + A + + A+ ++ +DM+ P+ YN
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM-DDMLRAAIAPSRSTYN 85
Query: 372 ILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSI 431
L+ + GN LE KM+ G D T+ I+L R+Y +A E M
Sbjct: 86 NLINACGSSGNWREALEVCKKMTDN-GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 144
Query: 432 KSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGK--LPEISVWKSLASLF 483
P ++N +I L LG+ +A+ M + P++ + S+ L+
Sbjct: 145 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLY 198
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 154/376 (40%), Gaps = 49/376 (13%)
Query: 115 TQSFNTLLQIMVSEDRLEAAHGLF-VDNSCGWEVKSRVHALNLL--MYALCGK-GRSDLA 170
T +LL + S+ R A+GL+ + G + V L +L + AL GK G+S A
Sbjct: 191 TSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAA 250
Query: 171 LQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRT 230
+F + + G PN +Y + ++ LC + A + M + GE +
Sbjct: 251 FDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKML-KSGVLSEGEQM---GN 306
Query: 231 LLDALCEDGKFEEAIEI--LSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
++ C++GK EEA + L+K K L P R L + C + +GT E
Sbjct: 307 IITWFCKEGKAEEAYSVYELAKTKEKSL--PPRFVATLITALCKN----DGTITFAQE-- 358
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
M DL E++ RG KP F + +LC++ V
Sbjct: 359 -------------MLGDLSGEAR------------RRGIKP----FSDVIHSLCRMRNVK 389
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
+A K + DM++ P + V+N+++ G+ E L M + G D TY +
Sbjct: 390 DA-KALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESR-GLKPDVYTYTV 447
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
++ + EA ++L + K +Y++LI+G C + EA+ L +M G
Sbjct: 448 IISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFG 507
Query: 469 KLPEISVWKSLASLFC 484
P + L FC
Sbjct: 508 VQPNADEYNKLIQSFC 523
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 6/170 (3%)
Query: 154 LNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMF 213
NL+++A G D A ++ + M+ +G P+ +Y +++ G G + EA +L
Sbjct: 410 FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILA--- 466
Query: 214 WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSD 273
+K V Y L+ C+ +++EA+++L+++ R G++ YN+L S C
Sbjct: 467 -EAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLK 525
Query: 274 GRDIEGTKRLIHEALIKG-SVPSLSSYNAMAV-DLYSESKIDEADKVIVE 321
D E + L E KG + ++S AV ++ SE+K+ E ++ E
Sbjct: 526 ALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKVTEDGNLLAE 575
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 136/344 (39%), Gaps = 17/344 (4%)
Query: 50 TMISILGTSGRLGEMRDVI---EQMRQDSCECKDTVFASAINIYANA----GLVDEAITL 102
T I ++ R G ++ I E R CK + + +A G V EA
Sbjct: 175 TFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMY 234
Query: 103 FKNIPQFNCVNWTQS---FNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMY 159
+ I NW S FN LL +L+ A L+ + VK V L+
Sbjct: 235 LERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLW-EEMKAMNVKPTVVTYGTLIE 293
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
C R +A+++ +EM N + ++ GL GRL EA ++ F S
Sbjct: 294 GYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCES-- 351
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
G IV Y +L+ C+ G A +IL ++ +G+ YN S E
Sbjct: 352 --GPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF-FKYFSKHNKTEE 408
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
L + + G P +Y+ + L + K+ A +V EM++RG P +
Sbjct: 409 GMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIH 468
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
LC++ ++EA + ++ V +P + ++ LR+ G S
Sbjct: 469 LLCRLEMLEEAFEEF-DNAVRRGIIPQYITFKMIDNGLRSKGMS 511
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 120/302 (39%), Gaps = 43/302 (14%)
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQK--GNGEDIVVYRTLLDALCEDGKFEEA 244
D++ +L++ G + +A F R + + ++ + LLDALC++G EA
Sbjct: 174 DTFIVLIRRYARAGMVQQAIRAFE--FARSYEPVCKSATELRLLEVLLDALCKEGHVREA 231
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAV 304
L +I GT + VPS+ +N +
Sbjct: 232 SMYLERI--------------------------GGT-------MDSNWVPSVRIFNILLN 258
Query: 305 DLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCL 364
+ K+ +A+K+ EM+ KPT + + C++ RV A++V+EE M
Sbjct: 259 GWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEE-MKMAEME 317
Query: 365 PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE--TYIILLEMLCRERRYLEA 422
N V+N ++ L G + + E+L M + C + TY L++ C+ A
Sbjct: 318 INFMVFNPIIDGL---GEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGA 374
Query: 423 SQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASL 482
S++L+ M + P +YN K + E + +I G P+ + + +
Sbjct: 375 SKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKM 434
Query: 483 FC 484
C
Sbjct: 435 LC 436
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 101/496 (20%), Positives = 194/496 (39%), Gaps = 97/496 (19%)
Query: 19 RTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEM--RDVIEQMRQD-- 74
R +PM +F A+ + P +T + ++ ++++ L R E+ V +++R D
Sbjct: 110 RLSSSPMLLHSVFKWAEMK-PGFTLSPSLFDSVVNSL-CKAREFEIAWSLVFDRVRSDEG 167
Query: 75 SCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVS----EDR 130
S F I YA AG+V +AI F+ + V + + LL++++ E
Sbjct: 168 SNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGH 227
Query: 131 LEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS---DLALQIFQEMDYQGCYPNRD 187
+ A ++++ G + V ++ + L G RS A ++++EM P
Sbjct: 228 VREA-SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVV 286
Query: 188 SYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE-DIVVYRTLLDALCEDGKFEEAIE 246
+Y L++G C R+ A +L M + E + +V+ ++D L E G+ EA+
Sbjct: 287 TYGTLIEGYCRMRRVQIAMEVLEEM-----KMAEMEINFMVFNPIIDGLGEAGRLSEALG 341
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
++ + C G P++ +YN++ +
Sbjct: 342 MMERFF-----------------VCESG-------------------PTIVTYNSLVKNF 365
Query: 307 YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPN 366
+ A K++ M RG PT + K ++ +E +
Sbjct: 366 CKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGM--------------- 410
Query: 367 SEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLL 426
N+ K + + G + DR TY ++L+MLC + + A Q+
Sbjct: 411 ----NLYFKLI------------------EAGHSPDRLTYHLILKMLCEDGKLSLAMQVN 448
Query: 427 EQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNL 486
++M + P + LI LC L EA ++ + +G +P+ +K + N
Sbjct: 449 KEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFK----MIDNG 504
Query: 487 EMMKASSEIFNRLRSL 502
K S++ RL SL
Sbjct: 505 LRSKGMSDMAKRLSSL 520
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/407 (19%), Positives = 168/407 (41%), Gaps = 19/407 (4%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
++ MI R E+ + M +D D +F + AN G V+ + +
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVV 207
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSR-VHALNLLMYALCGKG 165
+ + + N++L + L+ A F ++ R V A N ++ A C G
Sbjct: 208 IKLGMSSCLRVSNSILAVYAKCGELDFATKFFR------RMRERDVIAWNSVLLAYCQNG 261
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
+ + A+++ +EM+ +G P ++ IL+ G G+ A L+ M G D+
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM----ETFGITADV 317
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIH 285
+ ++ L +G +A+++ K+ G+ P +S CS + I +
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGV-VPNAVTIMSAVSACSCLKVINQGSEVHS 376
Query: 286 EALIKGSVPSLSSYNAMAVDLYSE-SKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKV 344
A+ G + + N++ VD+YS+ K+++A KV ++++ + + + C+
Sbjct: 377 IAVKMGFIDDVLVGNSL-VDMYSKCGKLEDARKVFDSVKNKDV----YTWNSMITGYCQA 431
Query: 345 SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRE 404
+A ++ M N PN +N ++ G+ ++ +M K +
Sbjct: 432 GYCGKAYELFTR-MQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTA 490
Query: 405 TYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSL 451
T+ +++ + + EA +L +M + P + + SL+ +L
Sbjct: 491 TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 152/374 (40%), Gaps = 31/374 (8%)
Query: 63 EMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLL 122
E V +MR+ E T + S I+ A +++ + LF + S+NTL+
Sbjct: 66 EAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLM 125
Query: 123 QIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGC 182
R A + ++ + + N+L+ ALC G +D A+++F+ + +
Sbjct: 126 SCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-V 184
Query: 183 YPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFE 242
P +Y IL+ GLC R+ M + + G + V Y T+L + + E
Sbjct: 185 KPELMTYNILINGLCKSRRVGSVDW----MMRELKKSGYTPNAVTYTTMLKMYFKTKRIE 240
Query: 243 EAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL------IHEALIKGS-VPS 295
+ +++ K+ ++G Y + C+ + T R +HE + G+
Sbjct: 241 KGLQLFLKMKKEG-------YTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQD 293
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
+ SYN + + + +D D ++ E++ +G KP V L + A E
Sbjct: 294 IVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGA----E 349
Query: 356 EDMVAVNCL---PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEM 412
+ + + + P+ N L+ L G+ + M + D TY ++
Sbjct: 350 KHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR-----DEFTYTSVVHN 404
Query: 413 LCRERRYLEASQLL 426
LC++ R + AS+LL
Sbjct: 405 LCKDGRLVCASKLL 418
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 123/307 (40%), Gaps = 49/307 (15%)
Query: 181 GCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGK 240
G P+ +Y L+KG + EA Y++ R+ + G D+ Y +L+ ++
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEA----YAVTRRMREAGIEPDVTTYNSLISGAAKNLM 98
Query: 241 FEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYN 300
+++ ++L GL YN L GR E K L + + G VP + +YN
Sbjct: 99 LNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYN 158
Query: 301 AMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVA 360
+ + ALCK D AI++ +
Sbjct: 159 IL-----------------------------------LDALCKSGHTDNAIELFKHLKSR 183
Query: 361 VNCLPNSEVYNILLKNL---RNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRER 417
V P YNIL+ L R VG+ ++ L KK G T + TY +L+M + +
Sbjct: 184 VK--PELMTYNILINGLCKSRRVGSVDWMMREL----KKSGYTPNAVTYTTMLKMYFKTK 237
Query: 418 RYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG-KLPEISVW 476
R + QL +M + Y + +++ L GR EA + +++ G + +I +
Sbjct: 238 RIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSY 297
Query: 477 KSLASLF 483
+L +L+
Sbjct: 298 NTLLNLY 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 7/217 (3%)
Query: 232 LDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL--DLSQCSDGRDIEGTKRLIHEALI 289
+++LC+ E A +L +R G+ YN L ++ + R + EA I
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 290 KGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDE 349
+ P +++YN++ ++ ++ EM G P + ++ K+ R E
Sbjct: 80 E---PDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 350 AIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIIL 409
A K++ ED+ +P + YNILL L G++ +E + +V + TY IL
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRV--KPELMTYNIL 194
Query: 410 LEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIK 446
+ LC+ RR ++ ++ Y P A +Y +++K
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLK 231
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 104/227 (45%), Gaps = 4/227 (1%)
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIF 334
R++E + L+ + + G +P + +YN + IDEA V M++ G +P +
Sbjct: 27 RNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTY 86
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMS 394
+ ++ K ++ +++ +E M+ P+ YN L+ +G + L++
Sbjct: 87 NSLISGAAKNLMLNRVLQLFDE-MLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDI 145
Query: 395 KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQ 454
G +TY ILL+ LC+ A +L + + + P +YN LI GLC R+
Sbjct: 146 HLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCK-SRR 203
Query: 455 YEAVMW-LEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+V W + ++ G P + ++ ++ + ++ ++F +++
Sbjct: 204 VGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 5/171 (2%)
Query: 333 IFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKN-LRNVGNSAAVLESLN 391
+ V +LCK ++ A + + D + + LP+ YN L+K R +G A ++
Sbjct: 15 LLNISVNSLCKFRNLERA-ETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY--AVT 71
Query: 392 KMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSL 451
+ ++ G D TY L+ + QL ++M P SYN+L+ L
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131
Query: 452 GRQYEAVMWL-EDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
GR EA L ED+ G +P I + L C + E+F L+S
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS 182
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 147/358 (41%), Gaps = 56/358 (15%)
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
V A N+++ + + D+A +F EM + P+R +Y+ L+ +G A L
Sbjct: 155 VFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQ 214
Query: 211 SMFWRISQKGNGEDIVVYRTLLD---ALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLD 267
M Q D+V+Y L++ LC+ + +AI I S++ R G+
Sbjct: 215 KM----EQDRVSGDLVLYSNLIELSRRLCD---YSKAISIFSRLKRSGI----------- 256
Query: 268 LSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKI-DEADKVIVEMQDRG 326
P L +YN+M +++Y ++K+ EA +I EM + G
Sbjct: 257 -------------------------TPDLVAYNSM-INVYGKAKLFREARLLIKEMNEAG 290
Query: 327 FKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLK---NLRNVGNS 383
P + ++ + + EA+ V E M VNC + NI++ L V +
Sbjct: 291 VLPNTVSYSTLLSVYVENHKFLEALSVFAE-MKEVNCALDLTTCNIMIDVYGQLDMVKEA 349
Query: 384 AAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS 443
+ SL KM + +Y +L + + EA L M K +YN+
Sbjct: 350 DRLFWSLRKMDIEPNVV----SYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 444 LIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
+IK +A +++M S+G P + ++ S++ + ++ +F +LRS
Sbjct: 406 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS 463
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/479 (19%), Positives = 193/479 (40%), Gaps = 28/479 (5%)
Query: 30 IFNEAKSRY---PKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASA 86
+F+E + R +YT Y+T+I+ G G +++M QD ++++
Sbjct: 177 LFDEMRQRALAPDRYT-----YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNL 231
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD-NSCGW 145
I + +AI++F + + ++N+++ + A L + N G
Sbjct: 232 IELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG- 290
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
V + + L+ + AL +F EM C + + I++ + EA
Sbjct: 291 -VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEA 349
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR 265
L FW + + ++V Y T+L E F EAI + + RK ++ YN
Sbjct: 350 DRL----FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 266 LDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDR 325
+ + + E L+ E +G P+ +Y+ + K+D A + +++
Sbjct: 406 M-IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSS 464
Query: 326 GFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAA 385
G + + +++ + A +V + A +++ E + N +P IL K R +
Sbjct: 465 GVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDN-IPRETAITILAKAGRTEEATWV 523
Query: 386 VLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
++ G D + ++ + R +RY+ ++ E+M Y+P DS N +
Sbjct: 524 FRQAFES-----GEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFP--DS-NVIA 575
Query: 446 KGLCSLGRQYE---AVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
L + G+Q E A +M +G + V + SL+ + + + +F RL S
Sbjct: 576 MVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLES 634
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 166/387 (42%), Gaps = 14/387 (3%)
Query: 44 NGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLF 103
N Y+T++S+ + + E V +M++ +C T I++Y +V EA LF
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 104 KNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCG 163
++ + + S+NT+L++ + A LF +++ V N ++
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK-DIEQNVVTYNTMIKIYGK 412
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE 223
+ A + QEM +G PN +Y+ ++ G+L A ++F ++ G
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAA----TLFQKLRSSGVEI 468
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
D V+Y+T++ A G A +L + LK P ++ + E +
Sbjct: 469 DQVLYQTMIVAYERVGLMGHAKRLLHE-----LKLPDNIPRETAITILAKAGRTEEATWV 523
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSES-KIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
+A G V +S + M ++LYS + + +V +M+ G+ P + + A
Sbjct: 524 FRQAFESGEVKDISVFGCM-INLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYG 582
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTAD 402
K ++A V E M C+ EV+ +L +L + ++ESL + +
Sbjct: 583 KQREFEKADTVYRE-MQEEGCVFPDEVHFQML-SLYSSKKDFEMVESLFQRLESDPNVNS 640
Query: 403 RETYIILLEMLCRERRYLEASQLLEQM 429
+E ++++ + R + +AS+++ +M
Sbjct: 641 KELHLVVAALYERADKLNDASRVMNRM 667
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/409 (18%), Positives = 173/409 (42%), Gaps = 24/409 (5%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
KA+ IF+ K T + Y +MI++ G + E R +I++M + +++
Sbjct: 243 KAISIFSRLKR--SGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 86 AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGW 145
+++Y EA+++F + + NC + N ++ + D ++ A LF W
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF------W 354
Query: 146 EVKSRVHALNLLMYALCGK--GRSDL---ALQIFQEMDYQGCYPNRDSYAILMKGLCHDG 200
++ N++ Y + G ++L A+ +F+ M + N +Y ++K
Sbjct: 355 SLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM 414
Query: 201 RLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPK 260
+AT+L+ M +G + + Y T++ + GK + A + K+ G++ +
Sbjct: 415 EHEKATNLVQEM----QSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
Query: 261 RCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIV 320
Y + ++ G + KRL+HE + ++P ++ +A + +EA V
Sbjct: 471 VLYQTMIVAYERVGL-MGHAKRLLHELKLPDNIPRETAITILA----KAGRTEEATWVFR 525
Query: 321 EMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNV 380
+ + G ++F + + R I+V E+ M P+S V ++L N
Sbjct: 526 QAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEK-MRTAGYFPDSNVIAMVL-NAYGK 583
Query: 381 GNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQM 429
+++ + ++ GC E + +L + ++ + L +++
Sbjct: 584 QREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRL 632
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 99/213 (46%), Gaps = 8/213 (3%)
Query: 293 VPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA-- 350
PS+ +YN + ++ + D A + EM+ R P R + + + K D A
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 351 -IKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIIL 409
++ +E+D V+ + + +Y+ L++ R + + + + +++ K+ G T D Y +
Sbjct: 212 WLQKMEQDRVSGDLV----LYSNLIELSRRLCDYSKAISIFSRL-KRSGITPDLVAYNSM 266
Query: 410 LEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGK 469
+ + + + + EA L+++M+ P SY++L+ + EA+ +M
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 470 LPEISVWKSLASLFCNLEMMKASSEIFNRLRSL 502
+++ + ++ L+M+K + +F LR +
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 359
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 16/219 (7%)
Query: 212 MFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQC 271
MF + + D Y ++ LC+ GKF+EA I + +L GL+ + YN + +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMM-IRFS 59
Query: 272 SDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTR 331
S GR ++L E + +G VP +YN+M L ++K+ +A KV +
Sbjct: 60 SLGR----AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSC 106
Query: 332 AIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLN 391
+ F + CK +RV + + + E M + N Y L+ R VG+ L+
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCE-MYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQ 165
Query: 392 KMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMS 430
+M G + T+ +L LC + +A +L Q S
Sbjct: 166 EMVSN-GVYSSSITFRDILPQLCSRKELRKAVAMLLQKS 203
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 140/318 (44%), Gaps = 15/318 (4%)
Query: 153 ALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
A+ L+M + A++ F MD P +++ L+ LC G + +A + +
Sbjct: 191 AMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLA- 249
Query: 213 FWRISQKGNGEDIVVYRTLLDALCED-GKFEEAIEILSKILRKGLKAPKRCYNRLDLSQC 271
S+K D+ + +L+ C EA I ++ + K Y+ + +S
Sbjct: 250 ----SKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHM-ISCF 304
Query: 272 SDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTR 331
S ++ + RL E +G P + YN++ L E DEA K++ ++ + G KP
Sbjct: 305 SKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDS 364
Query: 332 AIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLN 391
+ + + LC+ ++D A V+ M++ N P + ++ L+ + N LE L
Sbjct: 365 VTYNSMIRPLCEAGKLDVARNVLAT-MISENLSPTVDTFHAFLEAV----NFEKTLEVLG 419
Query: 392 KMS-KKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCS 450
+M +G T ET++++L L + ++ A ++ +M Y + I+GL S
Sbjct: 420 QMKISDLGPT--EETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLS 477
Query: 451 LGRQYEAVMWLEDMISQG 468
G +A +M S+G
Sbjct: 478 CGWLEKAREIYSEMKSKG 495
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 334 FEAKVAALCKV-SRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNK 392
F + C + + V EA ++ E M PN + Y+ ++ VGN L ++
Sbjct: 261 FNVILNGWCNIWTDVTEAKRIWRE-MGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDE 319
Query: 393 MSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLG 452
M KK G E Y L+ +L RE + EA +L+++++ + P + +YNS+I+ LC G
Sbjct: 320 M-KKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAG 378
Query: 453 RQYEAVMWLEDMISQGKLPEISVWKSL 479
+ A L MIS+ P + + +
Sbjct: 379 KLDVARNVLATMISENLSPTVDTFHAF 405
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 162/414 (39%), Gaps = 91/414 (21%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
+A +F+ SR N + M+S S +L + E + Q+ E + +
Sbjct: 95 EARELFDRVDSR-----KNVVTWTAMVSGYLRSKQLS----IAEMLFQEMPERNVVSWNT 145
Query: 86 AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGW 145
I+ YA +G +D+A+ LF +P+ N V+W N++++ +V R++ A LF
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPERNIVSW----NSMVKALVQRGRIDEAMNLFERMP--- 198
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRD--SYAILMKGLCHDGRLH 203
+ V + ++ L G+ D A ++F C P R+ S+ ++ G + R+
Sbjct: 199 --RRDVVSWTAMVDGLAKNGKVDEARRLFD------CMPERNIISWNAMITGYAQNNRID 250
Query: 204 EATHLLYSM---------------------------FWRISQKGNGEDIVVYRTLLDALC 236
EA L M F R+ +K +++ + T++
Sbjct: 251 EADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYV 306
Query: 237 EDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSD--------------GRDIEGTKR 282
E+ + EEA+ + SK+LR G P LS CSD + +
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNE 366
Query: 283 LIHEALIKGSVPS-------------------LSSYNAMAVDLYSESKIDEADKVIVEMQ 323
++ AL+ S L S+N+M EA ++ +M+
Sbjct: 367 IVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMR 426
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL 377
GFKP+ + + A V++ ++ +D+V LP E + L +L
Sbjct: 427 KHGFKPSAVTYLNLLFACSHAGLVEKGMEFF-KDLVRDESLPLREEHYTCLVDL 479
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/425 (19%), Positives = 173/425 (40%), Gaps = 59/425 (13%)
Query: 60 RLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFN 119
+LG+MR+ E + + + ++ Y + + A LF+ +P+ N V+W N
Sbjct: 89 KLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSW----N 144
Query: 120 TLLQIMVSEDRLEAAHGLFVD----NSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQ 175
T++ R++ A LF + N W N ++ AL +GR D A+ +F+
Sbjct: 145 TMIDGYAQSGRIDKALELFDEMPERNIVSW---------NSMVKALVQRGRIDEAMNLFE 195
Query: 176 EMDYQGCYPNRD--SYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLD 233
M P RD S+ ++ GL +G++ EA L M R +I+ + ++
Sbjct: 196 RM------PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER--------NIISWNAMIT 241
Query: 234 ALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK------RLIHEA 287
++ + +EA ++ + P+R + + R+ E K R+ +
Sbjct: 242 GYAQNNRIDEADQLFQVM-------PERDFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 288 LIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM-QDRGFKPTRAIFEAKVAALCKVSR 346
+I S+ M + +EA V +M +D KP + + ++A ++
Sbjct: 295 VI--------SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG 346
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETY 406
+ E ++ +++ + +E+ L N+ S ++ + + C D ++
Sbjct: 347 LVEGQQI--HQLISKSVHQKNEIVTSALLNM--YSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 407 IILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMIS 466
++ + EA ++ QM + P A +Y +L+ G + + + +D++
Sbjct: 403 NSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
Query: 467 QGKLP 471
LP
Sbjct: 463 DESLP 467
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 176/415 (42%), Gaps = 56/415 (13%)
Query: 94 GLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF--VDNSCGWEVKSRV 151
G + EA LF +P+ + V WT +++ + A LF VD+ + V
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKL----GDMREARELFDRVDS------RKNV 109
Query: 152 HALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRD--SYAILMKGLCHDGRLHEATHLL 209
++ + +A +FQEM P R+ S+ ++ G GR+ +A L
Sbjct: 110 VTWTAMVSGYLRSKQLSIAEMLFQEM------PERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 210 YSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLS 269
M R +IV + +++ AL + G+ +EA+ + ++ R+ + + + L
Sbjct: 164 DEMPER--------NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGL--- 212
Query: 270 QCSDGRDIEGTKRLIHEALIKGSVP--SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
+G+ ++ +RL +P ++ S+NAM ++IDEAD++ M +R F
Sbjct: 213 -AKNGK-VDEARRLFD------CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF 264
Query: 328 KPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVL 387
A + + + +++A + + M N + + + ++N N L
Sbjct: 265 ----ASWNTMITGFIRNREMNKACGLFDR-MPEKNVISWTTMITGYVENKEN----EEAL 315
Query: 388 ESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKG 447
+KM + + TY+ +L C + L Q + Q+ KS + S +
Sbjct: 316 NVFSKMLRDGSVKPNVGTYVSILSA-CSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLN 374
Query: 448 LCSLGRQYEAV--MWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+ S + A M+ ++ Q L IS W S+ +++ + K + E++N++R
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDL--IS-WNSMIAVYAHHGHGKEAIEMYNQMR 426
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 17/309 (5%)
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
N L+ A G S AL++F M +G PN ++ +++ L +G++ EA MF
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK----DMFL 500
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
++ G +++ + T+++ + ++G EEAI L K+ GL+ P + LS C+
Sbjct: 501 QMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLR-PNAFSITVALSACAHL 559
Query: 275 RDIEGTKRLIHEALIKG-SVPSLSSYNAMAVDLYSE-SKIDEADKVIVEMQDRGFKPTRA 332
+ R IH +I+ SL S VD+Y++ I++A+KV
Sbjct: 560 ASLH-IGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVF----GSKLYSELP 614
Query: 333 IFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNK 392
+ A ++A + EAI + + V P++ +L + G+ +E
Sbjct: 615 LSNAMISAYALYGNLKEAI-ALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTD 673
Query: 393 MSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLG 452
+ K E Y +++++L +A +L+E+M K P A SL+ C+
Sbjct: 674 IVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK---PDARMIQSLVAS-CNKQ 729
Query: 453 RQYEAVMWL 461
R+ E V +L
Sbjct: 730 RKTELVDYL 738
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 144/342 (42%), Gaps = 44/342 (12%)
Query: 16 QIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDS 75
++ R K+ K+ +F+E R K + + T+IS +G + E+M
Sbjct: 183 KVFRKSKDLEKSEKLFDEMLERGIK--PDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 240
Query: 76 CECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAH 135
CE + A+ I+ Y AG VD A++L+ +F+TL++I +
Sbjct: 241 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 300
Query: 136 GLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKG 195
++ + VK + N L+ ++ R A I++++ G PN +YA L++
Sbjct: 301 NIYEEMK-ALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRA 359
Query: 196 LCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF-EEAIEILSKILRK 254
GR L +++ + +KG +++Y TLL ++C D ++ +EA EI
Sbjct: 360 Y---GRARYGDDAL-AIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQ----- 409
Query: 255 GLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDE 314
D+ C + P +++++ ++ E
Sbjct: 410 ------------DMKNC------------------ETCDPDSWTFSSLITVYACSGRVSE 439
Query: 315 ADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
A+ +++M++ GF+PT + + + K +VD+ ++ ++
Sbjct: 440 AEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQ 481
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 142/354 (40%), Gaps = 45/354 (12%)
Query: 12 TYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQM 71
+++Q ++ K AL +F AK + P Y + Y + L ++ + E+M
Sbjct: 173 VHITQSLKIVKEVDAALSLFRWAK-KQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEM 231
Query: 72 RQDSCECKDTVFAS---AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSE 128
QDS D F + I A A ++ A FK + C TQ++N L+ + +++
Sbjct: 232 VQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNK 291
Query: 129 D-----------------------------------RLEAAHGLFVDNSCGWEVKSRVHA 153
RL+AA LF +++
Sbjct: 292 GLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF-QQMKERKLRPSFSV 350
Query: 154 LNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMF 213
+ L+ ++ GR D +++++ EM G P+ + L+ G+L A L M
Sbjct: 351 FSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEM- 409
Query: 214 WRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSD 273
+ G + +Y ++++ + GK E A+ + + + G Y+ L
Sbjct: 410 ---KKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGS 466
Query: 274 GRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
G+ ++ ++ + G P LSSY ++ L ++ +D A K+++EM+ G+
Sbjct: 467 GQ-VDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGY 519
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 121/313 (38%), Gaps = 38/313 (12%)
Query: 168 DLALQIFQEMDYQGCY-PNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
D AL +F+ Q Y P+ + Y +L GL + GR L+ + S
Sbjct: 186 DAALSLFRWAKKQPWYLPSDECYVVLFDGL-NQGRDFVGIQSLFEEMVQDSSSHGDLSFN 244
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG---------RDI 277
Y ++ L + K E A K G K + YN L + + G +
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 278 EGTKRLI----HEALIKGSV---------------------PSLSSYNAMAVDLYSESKI 312
E T L+ +E +I PS S ++++ + ++
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 313 DEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNI 372
D + KV +EMQ G +P+ +F + + + K ++D A+++ +E M PN +Y +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDE-MKKSGFRPNFGLYTM 423
Query: 373 LLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK 432
++++ G + M +K G TY LLEM + A ++ M+
Sbjct: 424 IIESHAKSGKLEVAMTVFKDM-EKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 482
Query: 433 SYWPCADSYNSLI 445
P SY SL+
Sbjct: 483 GLRPGLSSYISLL 495
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 7 RVLTPTY--LSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEM 64
++ T TY L + + P KA I+ + +G Y +I L SGRL
Sbjct: 275 KIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKT--DSLLDGSTYELIIPSLAKSGRLDAA 332
Query: 65 RDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQI 124
+ +QM++ +VF+S ++ AG +D ++ ++ + F F +L+
Sbjct: 333 FKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDS 392
Query: 125 MVSEDRLEAAHGLFVDNSCGW-EVKSRVHALNLLMYAL-----CGKGRSDLALQIFQEMD 178
+L+ A L W E+K N +Y + G+ ++A+ +F++M+
Sbjct: 393 YAKAGKLDTALRL-------WDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME 445
Query: 179 YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSM 212
G P +Y+ L++ G++ A + SM
Sbjct: 446 KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 181/466 (38%), Gaps = 89/466 (19%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTV-FA 84
KAL FN + R + H + +I ILG +I +M ++ + V F
Sbjct: 63 KALEFFNWVE-RESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFR 121
Query: 85 SAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN--S 142
Y A LV EAI + + FN + T +N + + + +EA F N
Sbjct: 122 IVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIG 181
Query: 143 CGWEV-KSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGR 201
G+ V +++H NL++ G + +++MD +G + SY+I M +C G+
Sbjct: 182 NGFSVSNTKIH--NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGK 239
Query: 202 LHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
+A L M + D+V Y T++ A+ E I + ++ +G +
Sbjct: 240 PWKAVKLYKEM----KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCE---- 291
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
P+++++N + L + ++ +A +++ E
Sbjct: 292 --------------------------------PNVATHNTIIKLLCEDGRMRDAYRMLDE 319
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE--EDMVAVNCLPNSEVYNILLKNLRN 379
M RG +P + +C SR+++ +++ M+ P + Y +L++
Sbjct: 320 MPKRGCQPD------SITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFER 373
Query: 380 VGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCAD 439
G VL M K+ G T D Y +++ L +
Sbjct: 374 WGFLQPVLYVWKTM-KESGDTPDSAAYNAVIDALIQ------------------------ 408
Query: 440 SYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL-ASLFC 484
KG+ + R+YE M +E +S + PE+ V KSL +L C
Sbjct: 409 ------KGMLDMAREYEEEM-IERGLSPRRRPEL-VEKSLDETLVC 446
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 140/359 (38%), Gaps = 53/359 (14%)
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCY-PNRDSYAILMKGLCHDGRL 202
GW V+ + + L K + AL++F + Q Y P +Y L+ L G+
Sbjct: 86 GW-----VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQP 140
Query: 203 HEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC 262
+ A L M ++G + +Y LL A ++A IL K+
Sbjct: 141 NRAQKLFDEML----EEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMK---------- 186
Query: 263 YNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM 322
QC P + +Y+ + S+ D D + EM
Sbjct: 187 ----SFPQCQ---------------------PDVFTYSTLLKACVDASQFDLVDSLYKEM 221
Query: 323 QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN 382
+R P ++ +V R D+ KV+ + +V+ C P+ NI+L N+G
Sbjct: 222 DERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGK 281
Query: 383 SAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYN 442
++ES + + G + T+ IL+ ++R Y + S ++E M + +YN
Sbjct: 282 -IDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYN 340
Query: 443 SLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
++I+ +G + + M S+G K+ FC L A++ +F+++ S
Sbjct: 341 NIIEAFADVGDAKNMELTFDQMRSEG-------MKADTKTFCCLINGYANAGLFHKVIS 392
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA-----THLLYS 211
L+ L G D+A +IF+EM G P+ +Y IL+ GLC +G+L +A +
Sbjct: 22 LIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWD 81
Query: 212 MFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQC 271
+F +S KG ++V Y T++ C+ G EEA + K+ G YN L +
Sbjct: 82 LFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHL 141
Query: 272 SDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEA 315
DG D + LI E S+Y + D+ + ++D+
Sbjct: 142 RDG-DKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 183
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 29/206 (14%)
Query: 212 MFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQC 271
+F +SQ+G + V Y TL+ L + G + A EI +++ G+ YN L C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 272 SDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTR 331
+G+ + +AL+ G K+++ + + +G KP
Sbjct: 63 KNGK--------LEKALVAG-------------------KVEDGWDLFCSLSLKGVKPNV 95
Query: 332 AIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLN 391
+ ++ CK +EA + + M LP+S YN L++ G+ AA E +
Sbjct: 96 VTYTTMISGFCKKGFKEEAYTLFRK-MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 154
Query: 392 KMSKKVGCTADRETYIILLEMLCRER 417
+M + D TY ++ +ML R
Sbjct: 155 EM-RSCRFAGDASTYGLVTDMLHDGR 179
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 134/316 (42%), Gaps = 10/316 (3%)
Query: 170 ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYR 229
AL+I+Q + + N ++ L +G+L L F ++ + G D+V Y
Sbjct: 150 ALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKL----FDQMKRDGLKPDVVTYN 205
Query: 230 TLLDALCE-DGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
TLL + + +AIE++ ++ G++ Y + S+GR E + I +
Sbjct: 206 TLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRS-EEAENFIQQMK 264
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
++G P++ Y+++ + +AD+++ EM+ G P + + + K D
Sbjct: 265 VEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFD 324
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
+ +++ E + + N Y +L+ L G + M K G +D I
Sbjct: 325 RSRELLSE-LESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK-GVRSDGYANSI 382
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPC-ADSYNSLIKGLCSLGRQYEAVMWLEDMISQ 467
++ LCR +R+ EA + L + S +Y C N+++ C G + ++ M Q
Sbjct: 383 MISALCRSKRFKEAKE-LSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQ 441
Query: 468 GKLPEISVWKSLASLF 483
P+ + + L F
Sbjct: 442 AVSPDYNTFHILIKYF 457
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 22/254 (8%)
Query: 6 PRVLT-PTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNG-----PVYATMISILGTSG 59
P V+T T L+ I+ + KA+ + E HNG +Y T+++I ++G
Sbjct: 199 PDVVTYNTLLAGCIKVKNGYPKAIELIGE-------LPHNGIQMDSVMYGTVLAICASNG 251
Query: 60 RLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFN 119
R E + I+QM+ + ++S +N Y+ G +A L + V
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 120 TLLQIMVSEDRLEAAHGLFVD-NSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMD 178
TLL++ + + + L + S G+ + +LM L G+ + A IF +M
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYC--MLMDGLSKAGKLEEARSIFDDMK 369
Query: 179 YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE-DIVVYRTLLDALCE 237
+G + + +I++ LC R EA L R S+ + D+V+ T+L A C
Sbjct: 370 GKGVRSDGYANSIMISALCRSKRFKEAKEL-----SRDSETTYEKCDLVMLNTMLCAYCR 424
Query: 238 DGKFEEAIEILSKI 251
G+ E + ++ K+
Sbjct: 425 AGEMESVMRMMKKM 438
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/423 (19%), Positives = 155/423 (36%), Gaps = 84/423 (19%)
Query: 55 LGTSGRLGEMRDVIEQMRQDSCECKDT-VFASAINIYANAGLVDEAITLFKNIPQFNCVN 113
LG S + + +V M++ D V++ I++ G A+ LF + C
Sbjct: 107 LGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRP 166
Query: 114 WTQSFNTLLQIMV-SEDR---LEAAHGLFVDNSCGWE-VKSRVHALNLLMYALCGKGRSD 168
+N L+ + + D+ LE G ++D G E + V N+L+ A G+ D
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRG-YLDKMKGIERCQPNVVTYNILLRAFAQSGKVD 225
Query: 169 LALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVY 228
+F+++D P+ ++ +M +G + E +L R+ DI+ +
Sbjct: 226 QVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLT----RMRSNECKPDIITF 281
Query: 229 RTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
L+D+ + +FE+ + ++R K
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEK------------------------------- 310
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
P+L ++N+M ++ ID+A+ V +M D + P+ +E + V
Sbjct: 311 -----PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 365
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
A ++ EE VG S VL++ T
Sbjct: 366 RAREIFEE-----------------------VGESDRVLKA--------------STLNA 388
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
+LE+ CR Y+EA +L S P A +Y L K + + + ++ M G
Sbjct: 389 MLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Query: 469 KLP 471
+P
Sbjct: 449 IVP 451
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 172 QIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTL 231
+IF +M +G + + L DGR HEA L F +I K D+V + +
Sbjct: 186 EIFHKMRTEGFT---NEAVKMFDALSKDGRTHEALEL----FSQIKDKNRMPDVVAHTAI 238
Query: 232 LDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG 291
++A G+ +E +++ ++L G+ Y+ L +DG+ + K+ + E + G
Sbjct: 239 VEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNG 298
Query: 292 SVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT-RAIFEA 336
P+ ++Y A+ E K + A +++ EM+ +GF P +A+ EA
Sbjct: 299 MSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREA 344
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH-EATHLL 209
V A ++ A G++ L++F M G PN +Y++L+KGL DG+ H +A L
Sbjct: 232 VVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYL 291
Query: 210 YSMFWRISQKGNG--EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
M GNG + Y + +A +GK E A E+L ++ KG
Sbjct: 292 LEMM------GNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGF 334
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/423 (19%), Positives = 155/423 (36%), Gaps = 84/423 (19%)
Query: 55 LGTSGRLGEMRDVIEQMRQDSCECKDT-VFASAINIYANAGLVDEAITLFKNIPQFNCVN 113
LG S + + +V M++ D V++ I++ G A+ LF + C
Sbjct: 107 LGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRP 166
Query: 114 WTQSFNTLLQIMV-SEDR---LEAAHGLFVDNSCGWE-VKSRVHALNLLMYALCGKGRSD 168
+N L+ + + D+ LE G ++D G E + V N+L+ A G+ D
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRG-YLDKMKGIERCQPNVVTYNILLRAFAQSGKVD 225
Query: 169 LALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVY 228
+F+++D P+ ++ +M +G + E +L R+ DI+ +
Sbjct: 226 QVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLT----RMRSNECKPDIITF 281
Query: 229 RTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEAL 288
L+D+ + +FE+ + ++R K
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEK------------------------------- 310
Query: 289 IKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVD 348
P+L ++N+M ++ ID+A+ V +M D + P+ +E + V
Sbjct: 311 -----PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 365
Query: 349 EAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYII 408
A ++ EE VG S VL++ T
Sbjct: 366 RAREIFEE-----------------------VGESDRVLKA--------------STLNA 388
Query: 409 LLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQG 468
+LE+ CR Y+EA +L S P A +Y L K + + + ++ M G
Sbjct: 389 MLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Query: 469 KLP 471
+P
Sbjct: 449 IVP 451
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 114/249 (45%), Gaps = 6/249 (2%)
Query: 254 KGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKID 313
KGLK YN L C D R+IE +LI + + P + +Y + L + D
Sbjct: 240 KGLKPDVVTYNSLIDVYCKD-REIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 314 EADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNIL 373
+A +V+ EM++ G P A + A + C R+ +A K+++E MV PN+ YN+
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDE-MVKKGLSPNATTYNLF 357
Query: 374 LKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKS 433
+ L + E +M C + ++ + L++M R + A +L E M +K
Sbjct: 358 FRVLSLANDLGRSWELYVRMLGN-ECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 434 YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASS 493
+ + + L+ LC L + EA L +M+ +G P +K + L +E+
Sbjct: 417 FGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLL---MELANKHD 473
Query: 494 EIFNRLRSL 502
E+ N ++ +
Sbjct: 474 EVNNLIQKM 482
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 151/370 (40%), Gaps = 55/370 (14%)
Query: 14 LSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDV-IEQMR 72
L ++ + NP++ L + A S + H+ TM+ ILG + + ++ ++ IE R
Sbjct: 78 LKRVRFSHGNPIQTLEFYRYA-SAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKR 136
Query: 73 QDSCECKDTVFASAINIYANAGLVDEAITLF----KNIPQFNCVNWTQSFNTLLQIMVSE 128
+D + A V + + F + +P F T FN LL+ + E
Sbjct: 137 KDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFD---TACFNALLRTLCQE 193
Query: 129 DRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDS 188
+ A ++ +S + + + N+L L G S+ A F+EM +G P+ +
Sbjct: 194 KSMTDARNVY--HSLKHQFQPDLQTFNIL---LSGWKSSEEAEAFFEEMKGKGLKPDVVT 248
Query: 189 YAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEIL 248
Y L+ C D + +A Y + ++ ++ D++ Y T++ L G+ ++A E+L
Sbjct: 249 YNSLIDVYCKDREIEKA----YKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVL 304
Query: 249 SKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYS 308
++ G CY P +++YNA +
Sbjct: 305 KEMKEYG------CY------------------------------PDVAAYNAAIRNFCI 328
Query: 309 ESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSE 368
++ +ADK++ EM +G P + L + + + ++ M+ CLPN++
Sbjct: 329 ARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVR-MLGNECLPNTQ 387
Query: 369 VYNILLKNLR 378
L+K +
Sbjct: 388 SCMFLIKMFK 397
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 110/250 (44%), Gaps = 8/250 (3%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQE 176
++N+L+ + + +E A+ L +D E V ++ L G+ D A ++ +E
Sbjct: 248 TYNSLIDVYCKDREIEKAYKL-IDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKE 306
Query: 177 MDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALC 236
M GCYP+ +Y ++ C RL +A L+ M +KG + Y L
Sbjct: 307 MKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMV----KKGLSPNATTYNLFFRVLS 362
Query: 237 EDGKFEEAIEILSKIL-RKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPS 295
+ E+ ++L + L + C + + + + D+ RL + ++KG
Sbjct: 363 LANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDM--AMRLWEDMVVKGFGSY 420
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
+ + L +K++EA+K ++EM ++G +P+ F+ + ++ DE +I+
Sbjct: 421 SLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQ 480
Query: 356 EDMVAVNCLP 365
+ + +P
Sbjct: 481 KMAIFSTEIP 490
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 40/276 (14%)
Query: 245 IEILSKILRKGLKAPKRCYNR-LDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMA 303
+E+ + G+ K +R L + S G I+ + + + I+G S S + M
Sbjct: 56 VELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTML 115
Query: 304 VDLYSESKIDEADKVIVEMQ--DRGFKPTRA--IFEAKVAALCKVSRVDEAI---KVIEE 356
L K D+ ++++E + DR R + +VA LC V + E+ K +
Sbjct: 116 YILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVP 175
Query: 357 DMVAVNCL----------------------------PNSEVYNILLKNLRNVGNSAAVLE 388
D C P+ + +NILL ++ + A E
Sbjct: 176 DFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFE 235
Query: 389 SLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGL 448
+ K G D TY L+++ C++R +A +L+++M + P +Y ++I GL
Sbjct: 236 EM----KGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGL 291
Query: 449 CSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFC 484
+G+ +A L++M G P+++ + + FC
Sbjct: 292 GLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFC 327
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 160/364 (43%), Gaps = 21/364 (5%)
Query: 26 KALHIFNEAKSRYPKY--THNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVF 83
K + +F E KS+ + +G +Y + S L SGR E +V+E+M+ ++
Sbjct: 227 KVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELY 286
Query: 84 ASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSC 143
+ I +A A V LFK + + ++ + V E +E +
Sbjct: 287 SMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMR- 345
Query: 144 GWEVKSRVHALNLLMYALCG-----KGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
K+ + + ++ A+ +G ++ A+++++ + C + +YAI + C
Sbjct: 346 ----KAELKVTDCILCAIVNGFSKQRGFAE-AVKVYEWAMKEECEAGQVTYAIAINAYCR 400
Query: 199 DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA 258
+ ++A L M +KG + +V Y ++D + + +A+ +++K+ ++G K
Sbjct: 401 LEKYNKAEMLFDEMV----KKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKP 456
Query: 259 PKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK-IDEADK 317
YN L + D+ +++ E +P SY +M + Y+ SK ++ +
Sbjct: 457 NIWIYNSL-IDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSM-ISAYNRSKELERCVE 514
Query: 318 VIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNL 377
+ E + K RA+ V K SR+DE ++++ +DM ++ +Y+ L L
Sbjct: 515 LYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLL-QDMKVEGTRLDARLYSSALNAL 573
Query: 378 RNVG 381
R+ G
Sbjct: 574 RDAG 577
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 6/227 (2%)
Query: 276 DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFE 335
+ G +R++ GS P++ SY A+ K + A+ + MQ G +P+ ++
Sbjct: 161 NFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQ 220
Query: 336 AKVAALCKVSRVDEAIKVIEE--DMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKM 393
+ + + EA +V E D P+ ++Y++++ + GN + + M
Sbjct: 221 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 280
Query: 394 SKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGR 453
K G TY L+ E Y E S++ +QM P SY LIK R
Sbjct: 281 VGK-GVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARR 336
Query: 454 QYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+ EA+ E+M+ G P + L F M++ + +F +R
Sbjct: 337 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/382 (18%), Positives = 148/382 (38%), Gaps = 16/382 (4%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
+ +I+ G G V+ + + + + + Y G + A +F+ +
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSCGWEVKSRVHALNLLMYALCGK 164
++ +L+ V D+ + A +F +D +K ++++Y
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKS-PLKPDQKMYHMMIYMYKKA 267
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE- 223
G + A ++F M +G + +Y LM E ++ S + Q+ + +
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLMS--------FETSYKEVSKIYDQMQRSDIQP 319
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
D+V Y L+ A + EEA+ + ++L G++ + YN L L + +E K +
Sbjct: 320 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL-LDAFAISGMVEQAKTV 378
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCK 343
P L SY M + S ++ A+K ++ GF+P + + K
Sbjct: 379 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 438
Query: 344 VSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADR 403
+ V++ ++V E+ M N + ++ N + L +M + G D+
Sbjct: 439 ANDVEKMMEVYEK-MRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM-ESCGVPPDQ 496
Query: 404 ETYIILLEMLCRERRYLEASQL 425
+ +LL + + EA +L
Sbjct: 497 KAKNVLLSLASTQDELEEAKEL 518
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 6/227 (2%)
Query: 276 DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFE 335
+ G +R++ GS P++ SY A+ K + A+ + MQ G +P+ ++
Sbjct: 154 NFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQ 213
Query: 336 AKVAALCKVSRVDEAIKVIEE--DMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKM 393
+ + + EA +V E D P+ ++Y++++ + GN + + M
Sbjct: 214 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 273
Query: 394 SKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGR 453
K G TY L+ E Y E S++ +QM P SY LIK R
Sbjct: 274 VGK-GVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARR 329
Query: 454 QYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+ EA+ E+M+ G P + L F M++ + +F +R
Sbjct: 330 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/382 (18%), Positives = 148/382 (38%), Gaps = 16/382 (4%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
+ +I+ G G V+ + + + + + Y G + A +F+ +
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF---VDNSCGWEVKSRVHALNLLMYALCGK 164
++ +L+ V D+ + A +F +D +K ++++Y
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKS-PLKPDQKMYHMMIYMYKKA 260
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE- 223
G + A ++F M +G + +Y LM E ++ S + Q+ + +
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLMS--------FETSYKEVSKIYDQMQRSDIQP 312
Query: 224 DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRL 283
D+V Y L+ A + EEA+ + ++L G++ + YN L L + +E K +
Sbjct: 313 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL-LDAFAISGMVEQAKTV 371
Query: 284 IHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCK 343
P L SY M + S ++ A+K ++ GF+P + + K
Sbjct: 372 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
Query: 344 VSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADR 403
+ V++ ++V E+ M N + ++ N + L +M + G D+
Sbjct: 432 ANDVEKMMEVYEK-MRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM-ESCGVPPDQ 489
Query: 404 ETYIILLEMLCRERRYLEASQL 425
+ +LL + + EA +L
Sbjct: 490 KAKNVLLSLASTQDELEEAKEL 511
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 99/222 (44%), Gaps = 7/222 (3%)
Query: 39 PK-YTHNGPVYATMISILGTSGRLGEMRDVIEQMR-QD--SCECKDTVFASAINIYANAG 94
PK + + +Y T++ +GR+ + ++E MR QD + + + + ++ + NAG
Sbjct: 407 PKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAG 466
Query: 95 LVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHAL 154
L+D A + + + ++N LL+ + +++ A L + + ++ V +
Sbjct: 467 LMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSY 526
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
N+++ S AL F EM +G P + SY LMK G+ A + M
Sbjct: 527 NIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN 586
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
K D++ + L++ C G E+A ++S++ G
Sbjct: 587 DPRVK---VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 108/281 (38%), Gaps = 40/281 (14%)
Query: 184 PNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEE 243
P+ Y LMKG +GR+ + +L +M R + + D V Y T++ A G +
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAM-RRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 244 AIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMA 303
A ++L+++ R G+ A + YN L+KG L
Sbjct: 471 ARQVLAEMARMGVPANRITYN----------------------VLLKGYCKQL------- 501
Query: 304 VDLYSESKIDEADKVIVEM-QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVN 362
+ID A+ ++ EM +D G +P + + + A+ E M
Sbjct: 502 -------QIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNE-MRTRG 553
Query: 363 CLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEA 422
P Y L+K G ++M D + +L+E CR +A
Sbjct: 554 IAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDA 613
Query: 423 SQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEA-VMWLE 462
+++ +M ++P +Y SL G+ + +A ++W E
Sbjct: 614 QRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKE 654
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 151/374 (40%), Gaps = 24/374 (6%)
Query: 138 FVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLC 197
F D S + + A N ++ A G +D ++F+EM C P+ +Y +++K
Sbjct: 223 FGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCA 282
Query: 198 HDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLK 257
GR L+ + RI KG + +L+ A G A I+ + ++
Sbjct: 283 RVGR----KELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIV-----QAMR 333
Query: 258 APKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADK 317
+R ++ L +C+ E + + S Y+A ++ E +D K
Sbjct: 334 EKRRDLCKV-LRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARD-EVSEEGVVDVFKK 391
Query: 318 VIVEMQD---------RGFKPTRAIFEAKVAALCKVSRVDEAIKVIE--EDMVAVNCLPN 366
++ D + F P I+ + K RV + +++E N P+
Sbjct: 392 LLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPD 451
Query: 367 SEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLL 426
Y ++ N G + L +M+ ++G A+R TY +LL+ C++ + A LL
Sbjct: 452 EVTYTTVVSAFVNAGLMDRARQVLAEMA-RMGVPANRITYNVLLKGYCKQLQIDRAEDLL 510
Query: 427 EQMSIKS-YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCN 485
+M+ + P SYN +I G + A+ + +M ++G P + +L F
Sbjct: 511 REMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAM 570
Query: 486 LEMMKASSEIFNRL 499
K ++ +F+ +
Sbjct: 571 SGQPKLANRVFDEM 584
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 187/454 (41%), Gaps = 52/454 (11%)
Query: 51 MISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFN 110
I+I R G+ + ++ Q R D+ F + +N AN G D+ LF+ + +++
Sbjct: 213 FIAITRRVKRFGD-QSLVGQSRPDTA-----AFNAVLNACANLGDTDKYWKLFEEMSEWD 266
Query: 111 CVNWTQSFNTLLQIMVSEDRLEAAHGLFV-DNSCGWEVKSRVHALNLLMYALCGKGRSDL 169
C ++N ++++ R E +FV + +K + ++ L+ A G G
Sbjct: 267 CEPDVLTYNVMIKLCARVGRKELI--VFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRT 324
Query: 170 ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLL---------------YSMFW 214
A +I Q M + RD +L + C+ L E YS
Sbjct: 325 AERIVQAMREK----RRDLCKVLRE--CNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARD 378
Query: 215 RISQKGNGEDIVVYRTLL-DALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSD 273
+S++G + V++ LL +++ G+ +L K R Y L +
Sbjct: 379 EVSEEGV---VDVFKKLLPNSVDPSGE--------PPLLPKVFAPDSRIYTTLMKGYMKN 427
Query: 274 GRDIEGTKRLIHEALIK----GSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKP 329
GR + T R++ EA+ + S P +Y + + +D A +V+ EM G
Sbjct: 428 GR-VADTARML-EAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPA 485
Query: 330 TRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLES 389
R + + CK ++D A ++ E P+ YNI++ + +SA L
Sbjct: 486 NRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAF 545
Query: 390 LNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCAD--SYNSLIKG 447
N+M + G + +Y L++ + A+++ ++M + D ++N L++G
Sbjct: 546 FNEMRTR-GIAPTKISYTTLMKAFAMSGQPKLANRVFDEM-MNDPRVKVDLIAWNMLVEG 603
Query: 448 LCSLGRQYEAVMWLEDMISQGKLPEISVWKSLAS 481
C LG +A + M G P ++ + SLA+
Sbjct: 604 YCRLGLIEDAQRVVSRMKENGFYPNVATYGSLAN 637
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 5/201 (2%)
Query: 157 LMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRI 216
++ A G D A Q+ EM G NR +Y +L+KG C ++ A LL M
Sbjct: 458 VVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM---T 514
Query: 217 SQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRD 276
G D+V Y ++D A+ +++ +G+ K Y L + G+
Sbjct: 515 EDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQP 574
Query: 277 IEGTKRLIHEALIKGSVP-SLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFE 335
+ R+ E + V L ++N + I++A +V+ M++ GF P A +
Sbjct: 575 -KLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYG 633
Query: 336 AKVAALCKVSRVDEAIKVIEE 356
+ + + + +A+ + +E
Sbjct: 634 SLANGVSQARKPGDALLLWKE 654
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 125/301 (41%), Gaps = 35/301 (11%)
Query: 152 HALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYS 211
+++ L G+ + A+ IF+ +D C + + ++ LC G + A +++
Sbjct: 139 QTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHH 198
Query: 212 MFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQC 271
IS G ++ VYR+LL +EA ++ + G+ C+N L C
Sbjct: 199 HKDVIS----GNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLC 254
Query: 272 SDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTR 331
R++ G VP EA +++EM+ +PT
Sbjct: 255 E--RNVNRNP--------SGLVP-------------------EALNIMLEMRSYKIQPTS 285
Query: 332 AIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLN 391
+ ++ L + RV E+ +++E+ M C P++ Y +++ L G + ++
Sbjct: 286 MSYNILLSCLGRTRRVRESCQILEQ-MKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVD 344
Query: 392 KMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSL 451
+M ++ G +R+ Y L+ +LC R A QL E+M S Y+ LI LC
Sbjct: 345 EMIER-GFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKG 403
Query: 452 G 452
G
Sbjct: 404 G 404
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 347 VDEAIKVIEEDMVAVNCLPNSEVYNILLKNL--RNVGN--SAAVLESLNKM----SKKVG 398
V EA +VI+ DM + P+ +N LL L RNV S V E+LN M S K+
Sbjct: 224 VKEARRVIQ-DMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQ 282
Query: 399 CTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAV 458
T+ +Y ILL L R RR E+ Q+LEQM P SY +++ L GR +
Sbjct: 283 PTS--MSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGN 340
Query: 459 MWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLR 500
+++MI +G PE + L + C +E + + ++F +++
Sbjct: 341 QIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMK 382
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 114/284 (40%), Gaps = 28/284 (9%)
Query: 165 GRSDLALQIFQEMDY----QGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKG 220
G+S+L + F ++Y C P+ ++ +L+ C GR L+ S+ +S G
Sbjct: 190 GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFD----LVKSIVLEMSYLG 245
Query: 221 NGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGT 280
G V Y T++D + G FEE +L+ ++ G P C + +GR++
Sbjct: 246 VGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKM 305
Query: 281 KRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAA 340
+ + G P ++++N + + + V+ M+ R F T + +
Sbjct: 306 ESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIET 365
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKN-------------LRNVGNSAAVL 387
K R+++ V + M PNS Y L+ LR + NS VL
Sbjct: 366 FGKAGRIEKMDDVFRK-MKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVL 424
Query: 388 ES--LNKMSKKVGCTAD----RETYIILLEMLCRERRYLEASQL 425
++ N + G D +E YI + E C+ + A+ +
Sbjct: 425 DTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMI 468
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/323 (19%), Positives = 137/323 (42%), Gaps = 14/323 (4%)
Query: 9 LTPTYLSQIIRTQKNPMKALH-IFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDV 67
LT + Q+ + +H F +++ +P +TH M++I+G S + ++
Sbjct: 75 LTHEFFLQVCNNFPLSWRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWEL 134
Query: 68 IEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVS 127
+++ + D F + A+A + + + F + F + ++ N ++ +
Sbjct: 135 AQEIGKRGL-VNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCK 193
Query: 128 EDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRD 187
E +E A +F+ +K ++ C G A +++ M +G + +
Sbjct: 194 EKLVEEAKFVFI--KLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIE 251
Query: 188 SYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEI 247
+ +M+ L + EA+ + Y M +S++G D YR ++D LC++G+ + A ++
Sbjct: 252 AGKKIMETLLKKNQFDEASKVFYVM---VSKRGGDLDGGFYRVMIDWLCKNGRIDMARKV 308
Query: 248 LSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG-SVPSLSSYNAMAVDL 306
++ +G+ + L R +E L++G P +S Y+ + L
Sbjct: 309 FDEMRERGVYVDNLTWASLIYGLLVKRRVVEAY------GLVEGVENPDISIYHGLIKGL 362
Query: 307 YSESKIDEADKVIVEMQDRGFKP 329
+ EA +V +M RG +P
Sbjct: 363 VKIKRASEATEVFRKMIQRGCEP 385
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 114/257 (44%), Gaps = 14/257 (5%)
Query: 246 EILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVD 305
E+ +I ++GL K R+ L + R+++ H G + ++ + N
Sbjct: 133 ELAQEIGKRGLVNDKTF--RIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVET 190
Query: 306 LYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIK---VIEEDMVAVN 362
L E ++EA V +++++ KP + + C V + EA K ++ ++ V+
Sbjct: 191 LCKEKLVEEAKFVFIKLKE-FIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVD 249
Query: 363 CLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEA 422
++ LLK +N + A+ + M K G D Y ++++ LC+ R A
Sbjct: 250 IEAGKKIMETLLK--KNQFDEAS--KVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMA 305
Query: 423 SQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASL 482
++ ++M + + ++ SLI GL R EA +E + + P+IS++ L
Sbjct: 306 RKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKG 361
Query: 483 FCNLEMMKASSEIFNRL 499
++ ++E+F ++
Sbjct: 362 LVKIKRASEATEVFRKM 378
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 210/499 (42%), Gaps = 62/499 (12%)
Query: 23 NPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGR---LGEMRDVIEQMRQDSCECK 79
N KA+ +F E + ++ +TM+ +L E R + + + E
Sbjct: 69 NWEKAVELFREMQ-----FSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 80 DTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFV 139
++ S I +Y+ G ++ + +F ++ N +W N++L ++ A GL
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW----NSILSSYTKLGYVDDAIGLLD 179
Query: 140 DNS-CGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
+ CG +K + N L+ KG S A+ + + M G P+ S + L++ +
Sbjct: 180 EMEICG--LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE 237
Query: 199 DG--RLHEATH--LLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRK 254
G +L +A H +L + W D+ V TL+D + G A + + K
Sbjct: 238 PGHLKLGKAIHGYILRNQLWY--------DVYVETTLIDMYIKTGYLPYARMVFDMMDAK 289
Query: 255 GLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDE 314
+ A +N L +S S ++ + L+ +G P ++N++A + K ++
Sbjct: 290 NIVA----WNSL-VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 315 ADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV---IEEDMVAVNCLPNSEVYN 371
A VI +M+++G P + A + K A+KV ++E+ V PN+ +
Sbjct: 345 ALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG----PNAATMS 400
Query: 372 ILLKNLRNVGNSAAVLESLNK-----MSKKVGCTADRETYIILLEMLCRERRYLEASQLL 426
LLK L ++L S + + K + C A T ++ + Y ++ L
Sbjct: 401 TLLKIL----GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDM--------YGKSGDL- 447
Query: 427 EQMSIKSYWPCAD----SYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASL 482
Q +I+ +W + S+N ++ G GR E + M+ G P+ + S+ S+
Sbjct: 448 -QSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSV 506
Query: 483 FCNLEMMKASSEIFNRLRS 501
N +++ + F+ +RS
Sbjct: 507 CKNSGLVQEGWKYFDLMRS 525
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 183 YPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFE 242
+P +Y ++ G C R+ +A +L SM + KG D+V + TL++ C+ + +
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSM----ASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 243 EAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAM 302
+EI ++ R+G+ A Y L C G D++ + L++E + G P +++ M
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG-DLDAAQDLLNEMISCGVAPDYITFHCM 121
Query: 303 AVDLYSESKIDEADKVIVEMQ 323
L S+ ++ +A ++ ++Q
Sbjct: 122 LAGLCSKKELRKAFAILEDLQ 142
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 294 PSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKV 353
P+ +YN+M + ++D+A +++ M +G P F + CK RVD +++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 354 IEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEML 413
E M + N+ Y L+ VG+ A + LN+M G D T+ +L L
Sbjct: 68 FCE-MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI-SCGVAPDYITFHCMLAGL 125
Query: 414 CRERRYLEASQLLEQM 429
C ++ +A +LE +
Sbjct: 126 CSKKELRKAFAILEDL 141
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Query: 115 TQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIF 174
T ++N+++ +DR++ A + +D+ V + L+ C R D ++IF
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRM-LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 175 QEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDA 234
EM +G N +Y L+ G C G L A LL M G D + + +L
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI----SCGVAPDYITFHCMLAG 124
Query: 235 LCEDGKFEEAIEILSKI 251
LC + +A IL +
Sbjct: 125 LCSKKELRKAFAILEDL 141
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 123/311 (39%), Gaps = 55/311 (17%)
Query: 5 WPRVLTPTYLSQ----IIRTQKNPMKALHIFN-EAKSRYPKYTHNGPVYATMISILGTSG 59
W + L P + + +R Q +P AL IF A+ R Y HN Y TMI T
Sbjct: 65 WIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQR--GYKHNHEAYHTMIKQAITGK 122
Query: 60 RLGEMRDVIEQMRQDSCEC--------------KDTVFASAINIYANAGLVDEA------ 99
R + +IE++ +CE + +F A ++Y D++
Sbjct: 123 RNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLET 182
Query: 100 -----ITLFKNIPQFN-CVNWTQSFNTLLQIMVSEDRLE-----------AAHGLFVDNS 142
+L K + N C + + +L + M S + A L VD +
Sbjct: 183 YTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEA 242
Query: 143 CG-------WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKG 195
+ + + + L+ +C KGR L ++EM +G PN Y +L+
Sbjct: 243 IRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICS 302
Query: 196 LCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKG 255
L + RL EA ++Y M D++ Y T+L LC G+ EA+E++ + ++
Sbjct: 303 LSMERRLDEAVEVVYDML----ANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRD 358
Query: 256 LKAPKRCYNRL 266
+R Y L
Sbjct: 359 PVMGERNYRTL 369
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 321 EMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNV 380
+M+ G P + + A K VDEAI+V +E M PN+ Y+ L+K +
Sbjct: 213 QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKE-MALYGSEPNAYTYSYLVKGVCEK 271
Query: 381 GNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADS 440
G L +M K G + Y++L+ L ERR EA +++ M S P +
Sbjct: 272 GRVGQGLGFYKEMQVK-GMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLT 330
Query: 441 YNSLIKGLCSLGRQYEAVMWLED 463
YN+++ LC GR EA+ +E+
Sbjct: 331 YNTVLTELCRGGRGSEALEMVEE 353
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 207 HLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL 266
H + S+ ++ G D V ++ A + + +EAI + ++ G + Y+ L
Sbjct: 205 HAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYL 264
Query: 267 DLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRG 326
C GR +G E +KG VP+ S Y + L E ++DEA +V+ +M
Sbjct: 265 VKGVCEKGRVGQGLG-FYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANS 323
Query: 327 FKPTRAIFEAKVAALCKVSRVDEAIKVIEE 356
P + + LC+ R EA++++EE
Sbjct: 324 LSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 137/328 (41%), Gaps = 30/328 (9%)
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSC-GWEVKSRVHALNLLMYALCGKGRSDLALQIFQ 175
+F L++ +VS D LE A + D + G+ V V++ LM +D L+++Q
Sbjct: 203 TFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSY--LMMGCVKNSDADGVLKLYQ 260
Query: 176 EMDYQ--GCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVV------ 227
E+ + G + Y LMKG EA ++ GE+ V
Sbjct: 261 ELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEA--------MECYEEAVGENSKVRMSAMA 312
Query: 228 YRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR------CYNRLDLSQCSDGRDIEGTK 281
Y +L+AL E+GKF+EA+++ + +K P+ +N + C+ G+ E +
Sbjct: 313 YNYVLEALSENGKFDEALKLFDAV-KKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 282 RLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
K S P S+N + L + EA+K+ EM+++ KP + +
Sbjct: 372 VFRQMGDFKCS-PDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTC 430
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
K ++DE + MV N PN VYN L L G + M K+
Sbjct: 431 FKEGKIDEGAAYY-KTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKL--KM 487
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQM 429
D E Y ++ L R E +++++M
Sbjct: 488 DDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 11/232 (4%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKD----- 80
+A+ + EA K + Y ++ L +G+ E + + ++++ +
Sbjct: 291 EAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNL 350
Query: 81 TVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVD 140
F +N Y G +EA+ +F+ + F C T SFN L+ + + L A L+ +
Sbjct: 351 GTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGE 410
Query: 141 NSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDG 200
VK + LLM +G+ D ++ M PN Y L L G
Sbjct: 411 ME-EKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAG 469
Query: 201 RLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKIL 252
+L +A M ++ D Y+ ++ AL E G+ +E ++I+ ++L
Sbjct: 470 KLDDAKSFFDMMVSKLKM-----DDEAYKFIMRALSEAGRLDEMLKIVDEML 516
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 102/246 (41%), Gaps = 12/246 (4%)
Query: 188 SYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGE-----DIVVYRTLLDALCEDGKFE 242
+Y +++ L +G+ EA L F + ++ N ++ + +++ C GKFE
Sbjct: 312 AYNYVLEALSENGKFDEALKL----FDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFE 367
Query: 243 EAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAM 302
EA+E+ ++ +N L ++Q D + ++L E K P +Y +
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNL-MNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLL 426
Query: 303 AVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVN 362
+ E KIDE M + +P A++ L K ++D+A DM+
Sbjct: 427 MDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF--DMMVSK 484
Query: 363 CLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEA 422
+ E Y +++ L G +L+ +++M E + E L + R +
Sbjct: 485 LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDL 544
Query: 423 SQLLEQ 428
+L+E+
Sbjct: 545 EKLMEE 550
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 149/396 (37%), Gaps = 52/396 (13%)
Query: 119 NTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMD 178
N +L+++ D EAA L+ +S + + +N ++ A + + LQ+ ++
Sbjct: 100 NHILKLIRENDLEEAA--LYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFIN 157
Query: 179 YQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCED 238
G PN +Y ++ + D R E Y +F I I +R L+ L +
Sbjct: 158 QAGIAPNIITYNLIFQAYL-DVRKPEIALEHYKLF--IDNAPLNPSIATFRILVKGLVSN 214
Query: 239 GKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE------------ 286
E+A+EI + KG Y+ L + C D +G +L E
Sbjct: 215 DNLEKAMEIKEDMAVKGFVVDPVVYSYL-MMGCVKNSDADGVLKLYQELKEKLGGFVDDG 273
Query: 287 ----ALIKGSVP-----------------------SLSSYNAMAVDLYSESKIDEADKVI 319
L+KG S +YN + L K DEA K+
Sbjct: 274 VVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLF 333
Query: 320 VEMQDRGFKPTR-----AIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILL 374
++ P F V C + +EA++V + M C P++ +N L+
Sbjct: 334 DAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQ-MGDFKCSPDTLSFNNLM 392
Query: 375 KNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSY 434
L + A + +M +K D TY +L++ +E + E + + M +
Sbjct: 393 NQLCDNELLAEAEKLYGEMEEK-NVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNL 451
Query: 435 WPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKL 470
P YN L L G+ +A + + M+S+ K+
Sbjct: 452 RPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKM 487
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 118/251 (47%), Gaps = 14/251 (5%)
Query: 259 PKRCYNRLDLSQCSDGRD-IEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK--IDEA 315
PK Y+ L L+ C D + + ++ L G +P+ ++ ++ D + E +
Sbjct: 98 PKIVYSSL-LTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLS-DAWLERRRGSQSV 155
Query: 316 DKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLK 375
+I EM+ G+ P V++LC V ++DEAIKV+EE M A C+P+ E Y ++
Sbjct: 156 ADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEE-MSAAGCIPDVESYGAVIN 214
Query: 376 NLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYW 435
+L + V++ + +M K G + + + L R +A +++E + + Y
Sbjct: 215 SLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYP 274
Query: 436 PCADSYNSLIKGLCSLGRQY----EAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKA 491
+SY +++G C R+Y + VM + D +G +P I V + + N+ K
Sbjct: 275 VEFESYEVVVEG-CLEVREYILAGKVVMRMTD---RGFIPYIKVRQKVVERLINIGEWKL 330
Query: 492 SSEIFNRLRSL 502
+ + R+ L
Sbjct: 331 ACTVRQRVSEL 341
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 149/355 (41%), Gaps = 42/355 (11%)
Query: 98 EAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLL 157
+A +F +P+ + + WT +L D E A GLF G + +
Sbjct: 216 DARRVFDEMPEPDVICWT----AVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 158 MYALCGKGRSDLALQIFQEMDYQGCYPNR--DSYAILMKGLCHDGRLHEATHLLYSMFWR 215
+ A R +I ++ G N +S + M G C G + EA + M
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC--GSVREARQVFNGM--- 326
Query: 216 ISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR 275
S+K + V + LL C++G+ E+AIEI ++ K L C+ + L C+
Sbjct: 327 -SKKNS----VSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTV-LKACAGLA 376
Query: 276 DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESK-IDEADKVIVEMQDRGFKPTRAIF 334
+ K + + + +G ++ +A+ +DLY +S ID A +V +M R +
Sbjct: 377 AVRLGKEIHGQYVRRGCFGNVIVESAL-IDLYGKSGCIDSASRVYSKMSIRNM----ITW 431
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNK-- 392
A ++AL + R +EA+ DMV P+ Y + L G++ V E N
Sbjct: 432 NAMLSALAQNGRGEEAVSFFN-DMVKKGIKPD---YISFIAILTACGHTGMVDEGRNYFV 487
Query: 393 -MSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK---SYW-----PCA 438
M+K G E Y ++++L R + EA LLE+ + S W PCA
Sbjct: 488 LMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 542
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 137/328 (41%), Gaps = 22/328 (6%)
Query: 26 KALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFAS 85
+AL +F A R +G + T+++ G RL + +++ ++ + V +S
Sbjct: 247 EALGLF-YAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESS 305
Query: 86 AINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGW 145
+++Y G V EA +F + + N V+W+ Q E +E +F +
Sbjct: 306 LLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIE----IFREME--- 358
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
+ ++ ++ A G L +I + +GC+ N + L+ G + A
Sbjct: 359 --EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSA 416
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR 265
+ R+ K + +++ + +L AL ++G+ EEA+ + +++KG+K P
Sbjct: 417 S--------RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIK-PDYISFI 467
Query: 266 LDLSQCSD-GRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKI-DEADKVIVEMQ 323
L+ C G EG + A G P Y+ M +DL + + +EA+ ++ +
Sbjct: 468 AILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCM-IDLLGRAGLFEEAENLLERAE 526
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAI 351
R + AA SRV E I
Sbjct: 527 CRNDASLWGVLLGPCAANADASRVAERI 554
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 134/299 (44%), Gaps = 39/299 (13%)
Query: 153 ALNLLMYALCGKGRSDL-ALQIFQEMDYQ-GCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
ALN+L GK R + AL +F M Q YP+ +Y + L G + E +++
Sbjct: 513 ALNVL-----GKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVID 567
Query: 211 SMFWRISQKGNG-----------EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAP 259
+M +K D+VVY +L+A + ++E A +L ++ ++G K
Sbjct: 568 TMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPS 627
Query: 260 KRCYNRL--DLSQCSDGRDIEGTKRLIHE---ALIKGSVPSLSSYNAMAVDLYSESKIDE 314
Y + + C L+HE + K S+P+ +Y + L+ E K DE
Sbjct: 628 PVTYGLIMEVMLACE-------KYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDE 680
Query: 315 ADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILL 374
A + +M+ RG + A++ LC R +E + ++++ + V P Y L+
Sbjct: 681 AVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKK-ICRVANKPLVVTYTGLI 739
Query: 375 K---NLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMS 430
+ + N+ N+A + + + K+ C+ + T I+L+ + + EA +L ++MS
Sbjct: 740 QACVDSGNIKNAAYIFDQMKKV-----CSPNLVTCNIMLKAYLQGGLFEEARELFQKMS 793
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 26/190 (13%)
Query: 57 TSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQ 116
+ G L R +++++ Q + + S ++ YA G +DEA LF+ +P+ N V
Sbjct: 54 SEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV---- 109
Query: 117 SFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQE 176
+ N +L V R+ A LF E+ V + +++ ALC GRS+ A+++F E
Sbjct: 110 TCNAMLTGYVKCRRMNEAWTLFR------EMPKNVVSWTVMLTALCDDGRSEDAVELFDE 163
Query: 177 MDYQGCYPNRD--SYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDA 234
M P R+ S+ L+ GL +G + +A + +M R D+V + ++
Sbjct: 164 M------PERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR--------DVVSWNAMIKG 209
Query: 235 LCEDGKFEEA 244
E+ EEA
Sbjct: 210 YIENDGMEEA 219
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 118/290 (40%), Gaps = 18/290 (6%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
+Y T+IS SG++ M +V QM E F + I+ A AG V +A + +
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 107 PQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVH-------ALNLLMY 159
N FN L+ ++ A + E+K+ H ++ LM
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLA------EMKAETHPIDPDHISIGALMK 617
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQK 219
A C G+ + A +++Q + G + Y I + G A S++ + +K
Sbjct: 618 ACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFAC----SIYKDMKEK 673
Query: 220 GNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEG 279
D V + L+D +EA IL +G++ Y+ L + C + +D +
Sbjct: 674 DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSL-MGACCNAKDWKK 732
Query: 280 TKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKP 329
L + P++S+ NA+ L +++ +A + + E++ G KP
Sbjct: 733 ALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKP 782
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/466 (19%), Positives = 183/466 (39%), Gaps = 67/466 (14%)
Query: 29 HIFNEAKSRYPK-----YTHNG--PVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDT 81
H +E+ ++P + NG P + + L GR+ + ++E + Q D
Sbjct: 377 HQIDESMPQFPARNFELHNSNGRSPETSDAYNRLLRDGRIKDCISLLEDLDQRDLLDMDK 436
Query: 82 VF-ASAINIYANAGLVDEAITLFKNIPQFNCVNWTQS-FNTLLQIMVSEDRLEAAHGLF- 138
++ AS V EA K I +N T S FN L+ + S +E A G+
Sbjct: 437 IYHASFFKACKKQRAVKEAFRFTKLI-----LNPTMSTFNMLMSVCASSQDIEGARGVLR 491
Query: 139 VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
+ G +++ L+ + G+ D ++F +M G N ++ L+ G
Sbjct: 492 LVQESGMTADCKLY--TTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCAR 549
Query: 199 DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA 258
G++ +A + + + K D VV+ L+ A + G + A ++L+++ +
Sbjct: 550 AGQVAKA----FGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPI 605
Query: 259 -PKRCYNRLDLSQCSDGRDIEGTK---RLIHEALIKGSVPSLSSYNAMAVDLYSESKI-D 313
P + C + +E K ++IH+ I+G+ P + + +AV+ S+S D
Sbjct: 606 DPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGT-PEVYT---IAVNSCSKSGDWD 661
Query: 314 EADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNIL 373
A + +M+++ P F A + +DEA ++++
Sbjct: 662 FACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD----------------- 704
Query: 374 LKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKS 433
+K G +Y L+ C + + +A +L E++
Sbjct: 705 --------------------AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIK 744
Query: 434 YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSL 479
P + N+LI LC + +A+ +L+++ + G P + L
Sbjct: 745 LRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSML 790
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 113/278 (40%), Gaps = 5/278 (1%)
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
+ L+ E A +L + G+ A + Y L +S C+ ++ + H+
Sbjct: 469 TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTL-ISSCAKSGKVDAMFEVFHQ 527
Query: 287 ALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSR 346
G +L ++ A+ ++ +A ++ + KP R +F A ++A +
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA 587
Query: 347 VDEAIKVIEEDMVAVNCL-PNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRET 405
VD A V+ E + + P+ L+K N G E + +M K G E
Sbjct: 588 VDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKE-VYQMIHKYGIRGTPEV 646
Query: 406 YIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMI 465
Y I + + + A + + M K P +++LI EA L+D
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAK 706
Query: 466 SQG-KLPEISVWKSLASLFCNLEMMKASSEIFNRLRSL 502
SQG +L IS + SL CN + K + E++ +++S+
Sbjct: 707 SQGIRLGTIS-YSSLMGACCNAKDWKKALELYEKIKSI 743
>AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:513607-515604 FORWARD
LENGTH=665
Length = 665
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 139/330 (42%), Gaps = 42/330 (12%)
Query: 23 NPMKALHIF---NEAKSRYPKYTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECK 79
+P KAL F +E+ S + H+ Y M +LG L + +IE++R E +
Sbjct: 260 DPRKALLFFRWIDESGS----FKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEME 315
Query: 80 DTVFASAINIYANAGLVDEAITLFK--------NIPQFNCVNWTQSFNTLLQIMVSEDRL 131
+ + ++ EA+ LF+ N P +C + LL+ +V+ +L
Sbjct: 316 METYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHCC------SLLLKKIVTAKKL 369
Query: 132 EAAHGLFVDNSCGWEVKSRVHA---LNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDS 188
+ LF + V L ++ +L R + ++ + M+ G P+ D
Sbjct: 370 DM--DLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDL 427
Query: 189 YAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEIL 248
+++ GL G+ EA L+ M GN D +L++ C+ EEA E
Sbjct: 428 QSVIASGLSRKGKKDEANELVNFM----EASGNHLDDKAMASLVEGHCDAKDLEEASECF 483
Query: 249 SKIL-RKGLKAPKRCYNRLDLSQCS--DGRDIEGTKRLIHEALIKGSV-PSLSSYNAMAV 304
K++ ++G+ + +L L+ C+ RD+ +L E + + + P S+Y M
Sbjct: 484 KKMIGKEGVSYAGYAFEKLVLAYCNSFQARDV---YKLFSELVKQNQLKPWHSTYKIMVR 540
Query: 305 DLY-----SESKIDEADKVIVEMQDRGFKP 329
+L + +EA ++ M++ GF P
Sbjct: 541 NLLMKKVARDGGFEEALSLLPMMRNHGFPP 570
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 46/194 (23%)
Query: 172 QIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTL 231
+IF++M G PN ++ GLC DG + EA L F + KG ++V+Y +
Sbjct: 120 EIFKKMKEGGLIPN---AVAMLDGLCKDGLVQEAMKL----FGLMRDKGTIPEVVIYTAV 172
Query: 232 LDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG 291
++A C+ K E+A I K+ G+
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGI----------------------------------- 197
Query: 292 SVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDE-- 349
P+ SY + LY+ + +D+A EM + G P F V ALC+V V++
Sbjct: 198 -APNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 350 -AIKVIEEDMVAVN 362
AI + + AVN
Sbjct: 257 SAIDTLNQKGFAVN 270
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 46/194 (23%)
Query: 172 QIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTL 231
+IF++M G PN ++ GLC DG + EA L F + KG ++V+Y +
Sbjct: 120 EIFKKMKEGGLIPN---AVAMLDGLCKDGLVQEAMKL----FGLMRDKGTIPEVVIYTAV 172
Query: 232 LDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKG 291
++A C+ K E+A I K+ G+
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGI----------------------------------- 197
Query: 292 SVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDE-- 349
P+ SY + LY+ + +D+A EM + G P F V ALC+V V++
Sbjct: 198 -APNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 350 -AIKVIEEDMVAVN 362
AI + + AVN
Sbjct: 257 SAIDTLNQKGFAVN 270
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 42/210 (20%)
Query: 48 YATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
Y T+I + +G+L ++ E+M C + + I++Y +D+AI +F N
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRS 167
+ GL++D +++ N++M+ G G+
Sbjct: 837 R--------------------------SGLYLDE--------KIYT-NMIMHYGKG-GKM 860
Query: 168 DLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRL-HEATHLLYSMFWRISQKGNGEDIV 226
AL +F EM +G P SY +++K +C RL HE LL +M + G D+
Sbjct: 861 SEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAM----ERNGRCTDLS 915
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGL 256
Y TL+ E +F EA + ++ + KG+
Sbjct: 916 TYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 148/338 (43%), Gaps = 14/338 (4%)
Query: 49 ATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQ 108
AT+I++ G +L E + + + K +V S I+ Y G +++A LF +
Sbjct: 674 ATLIAVYGRQHKLKEAKRLYLAAGESKTPGK-SVIRSMIDAYVRCGWLEDAYGLFMESAE 732
Query: 109 FNCVNWTQSFNTLLQIMVSEDR-LEAAHGLFVDNSC-GWEVKSRVHALNLLMYALCGKGR 166
C + + L+ + + + EA H + +C ++ N L+ A+ G+
Sbjct: 733 KGCDPGAVTISILVNALTNRGKHREAEH---ISRTCLEKNIELDTVGYNTLIKAMLEAGK 789
Query: 167 SDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIV 226
A +I++ M G + +Y ++ +L +A + F + G D
Sbjct: 790 LQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEI----FSNARRSGLYLDEK 845
Query: 227 VYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHE 286
+Y ++ + GK EA+ + S++ +KG+K YN + + C+ R L+
Sbjct: 846 IYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMM-VKICATSRLHHEVDELLQA 904
Query: 287 ALIKGSVPSLSSYNAMAVDLYSES-KIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVS 345
G LS+Y + + +Y+ES + EA+K I ++++G + + F + ++AL K
Sbjct: 905 MERNGRCTDLSTYLTL-IQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAG 963
Query: 346 RVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
++EA + + M P+S +LK G++
Sbjct: 964 MMEEAERTYCK-MSEAGISPDSACKRTILKGYMTCGDA 1000
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 129/308 (41%), Gaps = 32/308 (10%)
Query: 41 YTHNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAI 100
+ H+ Y M +LG L ++++ +MR E + + + L+ EA+
Sbjct: 283 FKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAV 342
Query: 101 TLFK---------NIPQFNCVNWTQSFNTLLQIMVSEDRLEA---AHGLFVDNSCGWEVK 148
LF+ N P +C F LL+ +V+ L+ + + V G +
Sbjct: 343 DLFEIAMAGSSSSNNPTPHC------FCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALT 396
Query: 149 SRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHL 208
+ L ++ +L R + + ++ +EM G P+ D +++ L G+ EA
Sbjct: 397 DSL--LKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEF 454
Query: 209 LYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKIL-RKGLKAPKRCYNRLD 267
+ M GN D +L++ C+ G +EA+ K++ G+ + +L
Sbjct: 455 VDFM----ESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLV 510
Query: 268 LSQCSDGRDIEGTKRLIHEALIKGSV-PSLSSYNAMAVDLYS-----ESKIDEADKVIVE 321
L+ C+ + + +L+ + K + P S+Y ++ +L + + +EA ++
Sbjct: 511 LAYCNKNQ-VRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPI 569
Query: 322 MQDRGFKP 329
M+D GF P
Sbjct: 570 MKDHGFPP 577
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 184/421 (43%), Gaps = 38/421 (9%)
Query: 96 VDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF-----VDNSCGWEVKSR 150
V A+ LF ++ + N+ L ++ ++ A +F +N G
Sbjct: 123 VRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTG------ 176
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDS-YAILMK----GLCHDGRLHEA 205
H +L++ A+ + AL++F+E++ + P R S + +++ LC GR++
Sbjct: 177 -HTYSLMLKAVAEVKGCESALRMFRELERE---PKRRSCFDVVLYNTAISLC--GRINNV 230
Query: 206 THLLYSMFWRISQKGNGE--DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
WR+ KG+G + Y L+ G+ E A+++ +++ + +
Sbjct: 231 YET--ERIWRV-MKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAM 287
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
+ +S C+ + ++ L KG P+L + N + L K+ KV ++
Sbjct: 288 YAM-ISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLK 346
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVN--CLPNSEVYNILLKNLRNVG 381
G KP + A + AL K +R ++ +++ DM+ C N +YN + + + +G
Sbjct: 347 SLGHKPDEYTWNALLTALYKANRYEDVLQLF--DMIRSENLCCLNEYLYNTAMVSCQKLG 404
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
++ L +M G T +Y +++ + R+ A + E M+ + P +Y
Sbjct: 405 YWEKAVKLLYEMEGS-GLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTY 463
Query: 442 NSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMMKASSEIFNRLRS 501
SL++ C G ++ V ED++ + + P++S++ + C K + E++ ++R
Sbjct: 464 LSLVRS-CIWGSLWDEV---EDILKKVE-PDVSLYNAAIHGMCLRREFKFAKELYVKMRE 518
Query: 502 L 502
+
Sbjct: 519 M 519
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 149/359 (41%), Gaps = 19/359 (5%)
Query: 12 TYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMIS----ILGTSGRLGEMRDV 67
++LS ++R + KA +F + K G Y+ M+ + G L R++
Sbjct: 147 SFLSCLLR-NGDIQKAFTVFEFMR---KKENVTGHTYSLMLKAVAEVKGCESALRMFREL 202
Query: 68 IEQMRQDSCECKDTV-FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMV 126
+ ++ SC D V + +AI++ V E +++ + + +++ L+ I V
Sbjct: 203 EREPKRRSC--FDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFV 260
Query: 127 SEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNR 186
R E A ++ D ++ R A+ ++ A + + DLAL+IFQ M +G PN
Sbjct: 261 RCGRSELALDVY-DEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNL 319
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIE 246
+ L+ L G++ L++ ++ + G+ D + LL AL + ++E+ ++
Sbjct: 320 VACNTLINSLGKAGKV----GLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQ 375
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
+ I + L + C E +L++E G S SSYN +
Sbjct: 376 LFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISAC 435
Query: 307 YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEA---IKVIEEDMVAVN 362
K A V M R KP + + V + S DE +K +E D+ N
Sbjct: 436 EKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSLYN 494
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 115/289 (39%), Gaps = 39/289 (13%)
Query: 165 GRSDLALQIFQEM--DYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
GR F++M DY G +++S +++K LC G A ++ + I N
Sbjct: 189 GRPKQVTDFFEKMENDY-GLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENI 247
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
D+ L+ C K +EA + ++ R G + + YN + C R + K
Sbjct: 248 CDL-----LISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKL 302
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALC 342
E +KV++EM+ RG F + LC
Sbjct: 303 Q-----------------------------PEVEKVLLEMEFRGVPRNTETFNVLINNLC 333
Query: 343 KVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKM-SKKVGCTA 401
K+ R +EA+ + M C P++E Y +L+++L E ++KM S G
Sbjct: 334 KIRRTEEAMTLFGR-MGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELL 392
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCS 450
+++ Y L++LC R A + + M P +Y+ L+ +C+
Sbjct: 393 NKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCA 441
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 120/278 (43%), Gaps = 16/278 (5%)
Query: 106 IPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKG 165
I ++ + ++ + + +V R + F + +K +L L++ LC KG
Sbjct: 166 ISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKG 225
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
+ +A ++ + + +P+ + +L+ G C +L EAT L M S+ G
Sbjct: 226 HASIAEKMVKNTANE-IFPDENICDLLISGWCIAEKLDEATRLAGEM----SRGGFEIGT 280
Query: 226 VVYRTLLDALC------EDGKFEEAIE-ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
Y +LD +C + K + +E +L ++ +G+ +N L + C R E
Sbjct: 281 KAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKI-RRTE 339
Query: 279 GTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKP--TRAIFEA 336
L G P +Y + LY ++I E D++I +M+ G+ + +
Sbjct: 340 EAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYG 399
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILL 374
+ LC + R++ A+ V + M A C P + Y++L+
Sbjct: 400 FLKILCGIERLEHAMSVF-KSMKANGCKPGIKTYDLLM 436
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Query: 147 VKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEAT 206
V N+L+ LC R++ A+ +F M GC P+ ++Y +L++ L R+ E
Sbjct: 318 VPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGD 377
Query: 207 HLLYSMFWRISQKGNGE--DIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYN 264
++ M G GE + Y L LC + E A+ + + G K + Y+
Sbjct: 378 EMIDKM----KSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYD 433
Query: 265 RLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSY 299
L C++ + + L EA KG S Y
Sbjct: 434 LLMGKMCANNQ-LTRANGLYKEAAKKGIAVSPKEY 467
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 147/366 (40%), Gaps = 42/366 (11%)
Query: 82 VFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDN 141
++ + I YA G DEAI ++ + + + +F+ LL+ A G D
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLK----------ACGTMKDL 165
Query: 142 SCGWEVKSRVHALNLLMYALCGKGRSDL---------ALQIFQEMDYQGCYPNRD--SYA 190
+ G + ++ L + G D+ A ++F EM P RD S+
Sbjct: 166 NLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEM------PERDVISWT 219
Query: 191 ILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSK 250
L+ G + A L S+ +D+V + ++ ++ K +EA+E +
Sbjct: 220 ELIAAYARVGNMECAAELFESL--------PTKDMVAWTAMVTGFAQNAKPQEALEYFDR 271
Query: 251 ILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMA-VDLYSE 309
+ + G++A + +S C+ + R + A G PS A +D+YS+
Sbjct: 272 MEKSGIRADEVTVAGY-ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSK 330
Query: 310 -SKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSE 368
++EA V + M ++ + + + L R EA+ + + PN+
Sbjct: 331 CGNVEEAVNVFMSMNNKNV----FTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTV 386
Query: 369 VYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQ 428
+ L + G + + M + G R+ Y ++++L R R EA +L++
Sbjct: 387 TFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKT 446
Query: 429 MSIKSY 434
MS++ +
Sbjct: 447 MSVEPH 452
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 137/344 (39%), Gaps = 37/344 (10%)
Query: 43 HNGPVYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
HN + +++ E + Q+ + E S IN YA G A L
Sbjct: 113 HNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLL 172
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF----VDNSCGWEVKSRVHALNLLM 158
F IP+ + V+W N++++ V +++ A LF N+ W
Sbjct: 173 FDRIPEPDDVSW----NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTT----------- 217
Query: 159 YALCGKGRSDL---ALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWR 215
+ G ++D+ ALQ+F EM P+ S A + G L E ++S +
Sbjct: 218 -MISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL-EQGKWIHSYLNK 275
Query: 216 ISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGR 275
+ D V+ L+D + G+ EEA+E+ I +K ++A + L G
Sbjct: 276 TRIR---MDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA----WTALISGYAYHGH 328
Query: 276 DIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ-DRGFKPTRAIF 334
E + + E G P++ ++ A+ ++E + M+ D KPT +
Sbjct: 329 GREAISKFM-EMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 335 EAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLR 378
V L + +DEA + I+E + PN+ ++ LLK R
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQE----MPLKPNAVIWGALLKACR 427
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 111/296 (37%), Gaps = 66/296 (22%)
Query: 46 PVYATMISILGTSGRLGEMRD-------VIE-QMRQDSCECKDTVFASAINIYANAGLVD 97
P TM+S++ + GE+ VI Q++ D+ + ++ I++Y G+++
Sbjct: 366 PDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDA-----FLSSALIDMYCKCGIIE 420
Query: 98 EAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLL 157
A +FK + + WT +
Sbjct: 421 RAFMVFKTATEKDVALWTS----------------------------------------M 440
Query: 158 MYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRIS 217
+ L G ALQ+F M +G PN + ++ H G + E H+ M
Sbjct: 441 ITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHM---KD 497
Query: 218 QKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRL---DLSQCSDG 274
+ G + Y +L+D LC G+ EEA +I+ K K P R + LS C G
Sbjct: 498 KFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQK------KMPMRPSQSMWGSILSACRGG 551
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
DIE T L L+K Y ++ + + +DK M++RG K T
Sbjct: 552 EDIE-TAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKT 606
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 145/379 (38%), Gaps = 64/379 (16%)
Query: 68 IEQMRQ--DSCECKDTV-FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQI 124
I + RQ DS +D V + + I YA +G +DEA LF P + WT + +Q
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN 294
Query: 125 MVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYP 184
+ E+ E + N W N ++ R ++A ++F M +
Sbjct: 295 RMVEEARELFDKMPERNEVSW---------NAMLAGYVQGERMEMAKELFDVMPCR---- 341
Query: 185 NRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEA 244
N ++ ++ G G++ EA +L M R D V + ++ + G EA
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKR--------DPVSWAAMIAGYSQSGHSFEA 393
Query: 245 IEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPS--------- 295
+ + ++ R+G + + ++ LS C+D +E K+L H L+KG +
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSA-LSTCADVVALELGKQL-HGRLVKGGYETGCFVGNALL 451
Query: 296 -----------------------LSSYNAMAVDLYSESKIDE-ADKVIVEMQDRGFKPTR 331
+ S+N M + YS E A + M+ G KP
Sbjct: 452 LMYCKCGSIEEANDLFKEMAGKDIVSWNTM-IAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 332 AIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLN 391
A A ++A VD+ + +PNS+ Y ++ L A +LE +
Sbjct: 511 ATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL----GRAGLLEDAH 566
Query: 392 KMSKKVGCTADRETYIILL 410
+ K + D + LL
Sbjct: 567 NLMKNMPFEPDAAIWGTLL 585
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 189/480 (39%), Gaps = 73/480 (15%)
Query: 4 RWPRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGE 63
RW V +S +R + + A +F+E R + + MI + LG+
Sbjct: 92 RWSSVSYNGMISGYLRNGEFEL-ARKLFDEMPER------DLVSWNVMIKGYVRNRNLGK 144
Query: 64 MRDVIEQM-RQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLL 122
R++ E M +D C + + ++ YA G VD+A ++F +P+ N V+W N LL
Sbjct: 145 ARELFEIMPERDVCS-----WNTMLSGYAQNGCVDDARSVFDRMPEKNDVSW----NALL 195
Query: 123 QIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGC 182
V ++E A LF W + S N L+ K + A Q F M+ +
Sbjct: 196 SAYVQNSKMEEACMLFKSRE-NWALVS----WNCLLGGFVKKKKIVEARQFFDSMNVRDV 250
Query: 183 YPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFE 242
S+ ++ G G++ EA L + +D+ + ++ ++ E
Sbjct: 251 V----SWNTIITGYAQSGKIDEARQLF--------DESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 243 EAIEILSKILRKGLKAPKR---CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSY 299
EA E+ K+ P+R +N + L+ G +E K L + ++S++
Sbjct: 299 EARELFDKM-------PERNEVSWNAM-LAGYVQGERMEMAKELFDVMPCR----NVSTW 346
Query: 300 NAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMV 359
N M KI EA + +M R P + A +A + EA+++ + M
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKR--DPVS--WAAMIAGYSQSGHSFEALRLFVQ-ME 401
Query: 360 AVNCLPNSEVYNILLKNLRNVGNSAAVLE-------SLNKMSKKVGCTADRETYIILLEM 412
N ++ L +V LE L K + GC LL M
Sbjct: 402 REGGRLNRSSFSSALSTCADV----VALELGKQLHGRLVKGGYETGCFVGN----ALLLM 453
Query: 413 LCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPE 472
C+ EA+ L ++M+ K S+N++I G G A+ + E M +G P+
Sbjct: 454 YCKCGSIEEANDLFKEMAGKD----IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/424 (20%), Positives = 173/424 (40%), Gaps = 51/424 (12%)
Query: 8 VLTPTYLSQIIRT-QKNPMKALHIFN--EAKSRYPKYTHNGPVYATMISILGTSGRLGEM 64
VL+ ++ ++++ +++P+KAL F+ Y H+ Y + +L + E
Sbjct: 223 VLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEF 282
Query: 65 RDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQI 124
V+++M+ + + + + ++ E + L++ + Q + LL+
Sbjct: 283 WSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRY 342
Query: 125 MVSEDRLEAAHGLFVDNSCGWEVKSRVHAL-NLLMYALCGKGRSDLALQIFQEMDYQGCY 183
+ + V KS A+ + + +L GR D A +I + M G
Sbjct: 343 LSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYE 402
Query: 184 PNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEE 243
P+ +Y+ L+ GLC RL EA +L M +G DI + L+ C++ + ++
Sbjct: 403 PDNITYSQLVFGLCKAKRLEEARGVLDQM----EAQGCFPDIKTWTILIQGHCKNNELDK 458
Query: 244 AIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMA 303
A+ + +L KG DI+ + + LI G V
Sbjct: 459 ALACFANMLEKGF-------------------DIDSN---LLDVLIDGFV---------- 486
Query: 304 VDLYSESKIDEADKVIVEM-QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVN 362
+K + A ++EM ++ KP ++ ++ + L K+ + +EA+ +++ M N
Sbjct: 487 ----IHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQM-MKKQN 541
Query: 363 CLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEA 422
+E ++ L + ++ L+ L+ SK A Y ++E RE R +A
Sbjct: 542 YPAYAEAFDGYLAKFGTLEDAKKFLDVLS--SKDSPSFA---AYFHVIEAFYREGRLTDA 596
Query: 423 SQLL 426
LL
Sbjct: 597 KNLL 600
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 17/251 (6%)
Query: 238 DGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLS 297
DG F+ +I+ S +LR +P LDL R E T + + +A+ G SL+
Sbjct: 326 DGPFKPSIQDCSLLLRYLSGSPN---PDLDLV-FRVSRKYESTGKSLSKAVYDGIHRSLT 381
Query: 298 SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEED 357
S + DEA+++ M++ G++P + V LCK R++EA V+++
Sbjct: 382 SVG----------RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQ- 430
Query: 358 MVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRER 417
M A C P+ + + IL++ L M +K G D +L++
Sbjct: 431 MEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEK-GFDIDSNLLDVLIDGFVIHN 489
Query: 418 RYLEAS-QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVW 476
++ AS L+E + + P +Y LI L + + EA+ L+ M Q +
Sbjct: 490 KFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAF 549
Query: 477 KSLASLFCNLE 487
+ F LE
Sbjct: 550 DGYLAKFGTLE 560
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 153/363 (42%), Gaps = 51/363 (14%)
Query: 47 VYATMISILGTSG--RLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFK 104
Y ++I T+G +LG+ R+D D S +++Y G DEA +F+
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN---SLVSLYYKCGKFDEARAIFE 344
Query: 105 NIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSR-VHALNLLMYALCG 163
+P + V+W N LL VS + A +F E+K + + + +++ L
Sbjct: 345 KMPAKDLVSW----NALLSGYVSSGHIGEAKLIFK------EMKEKNILSWMIMISGLAE 394
Query: 164 KGRSDLALQIFQEMDYQGCYPNRDSYAILMK------GLCHDGRLH------------EA 205
G + L++F M +G P +++ +K C+ + H A
Sbjct: 395 NGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSA 454
Query: 206 THLLYSMFWRISQKGNGE---------DIVVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
+ L +M+ + D V + L+ AL + G EA+++ ++L+KG+
Sbjct: 455 GNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI 514
Query: 257 KAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSES-KIDEA 315
+ P R L+ CS ++ ++ +P + + A +DL S K +A
Sbjct: 515 R-PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDA 573
Query: 316 DKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLK 375
+ VI + FKPT I+EA ++ C+V E + +I D + +P + +LL
Sbjct: 574 ESVIESLP---FKPTAEIWEALLSG-CRVHGNME-LGIIAADKL-FGLIPEHDGTYMLLS 627
Query: 376 NLR 378
N+
Sbjct: 628 NMH 630
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 150/390 (38%), Gaps = 59/390 (15%)
Query: 46 PVYATMISILGTSGRLGEM---RDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITL 102
P T +L ++ +LG R + ++ +C V S +++YA G + A +
Sbjct: 124 PDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQV 183
Query: 103 FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
F+ P DR++ K + N+L+ C
Sbjct: 184 FEESP---------------------DRIK---------------KESILIWNVLINGYC 207
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
+A +F+ M + N S++ L+KG G L+ A L M
Sbjct: 208 RAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELM--------PE 255
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
+++V + TL++ + G +E AI ++L KGLK P LS CS + G+
Sbjct: 256 KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK-PNEYTIAAVLSACSKSGAL-GSGI 313
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSE-SKIDEADKVIVEMQDRGFKPTRAIFEAKVAAL 341
IH ++ + + VD+Y++ ++D A V M + A+ +
Sbjct: 314 RIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVH- 372
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTA 401
R +AI+ + M+ P+ V+ +L N L + M
Sbjct: 373 ---GRFHQAIQCFRQ-MMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP 428
Query: 402 DRETYIILLEMLCRERRYLEASQLLEQMSI 431
+ Y++++++L R + EA +L+E M I
Sbjct: 429 TLKHYVLVVDLLGRAGKLNEAHELVENMPI 458
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 168/380 (44%), Gaps = 56/380 (14%)
Query: 87 INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWE 146
++ Y G +DEA +F +P+ N V+WT L++ V +++ A LF W+
Sbjct: 86 VSGYMKNGEIDEARKVFDLMPERNVVSWT----ALVKGYVHNGKVDVAESLF------WK 135
Query: 147 V--KSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYA--ILMKGLCHDGRL 202
+ K++V + +++ GR D A ++++ + P++D+ A ++ GLC +GR+
Sbjct: 136 MPEKNKV-SWTVMLIGFLQDGRIDDACKLYEMI------PDKDNIARTSMIHGLCKEGRV 188
Query: 203 HEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRC 262
EA + M R ++ + T++ ++ + ++A +I + K +
Sbjct: 189 DEAREIFDEMSER--------SVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVS 236
Query: 263 YNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEM 322
+ + + +GR IE + L +K + + NAM L + +I +A +V M
Sbjct: 237 WTSMLMGYVQNGR-IEDAEELFEVMPVKPVI----ACNAMISGLGQKGEIAKARRVFDSM 291
Query: 323 QDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGN 382
++R + + + ++ +D I + ++ + + L+ L +
Sbjct: 292 KERNDASWQTVIKIHERNGFELEALDLFILMQKQGV--------RPTFPTLISILSVCAS 343
Query: 383 SAAVLESLNKMSKKVGCTADRETYI--ILLEMLCRERRYLEASQLLEQMSIKSYWPCAD- 439
A++ ++ V C D + Y+ +L+ M Y++ +L++ I +P D
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTM------YIKCGELVKSKLIFDRFPSKDI 397
Query: 440 -SYNSLIKGLCSLGRQYEAV 458
+NS+I G S G EA+
Sbjct: 398 IMWNSIISGYASHGLGEEAL 417
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 183/450 (40%), Gaps = 40/450 (8%)
Query: 6 PRVLTPTYLSQIIRTQKNPMKALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLGEMR 65
P L +L + P+ A +F++ R N + M+S SG L R
Sbjct: 80 PNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR------NLYSWNNMVSGYVKSGMLVRAR 133
Query: 66 DVIEQMRQDSCECKDTVFASAINI-YANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQI 124
V + M + +D V + + I YA G + EA+ +K + SF LL
Sbjct: 134 VVFDSMPE-----RDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTA 188
Query: 125 MVSEDRLE---AAHGLFVDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQG 181
V +L+ AHG + G+ + + YA CG+ S A + F EM +
Sbjct: 189 CVKSRQLQLNRQAHGQVL--VAGFLSNVVLSCSIIDAYAKCGQMES--AKRCFDEMTVKD 244
Query: 182 CYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKF 241
+ + L+ G G + A L M ++ V + L+ G
Sbjct: 245 IH----IWTTLISGYAKLGDMEAAEKLFCEM--------PEKNPVSWTALIAGYVRQGSG 292
Query: 242 EEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNA 301
A+++ K++ G+K + ++ + S G + IH +I+ +V + +
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKE--IHGYMIRTNVRPNAIVIS 350
Query: 302 MAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAV 361
+D+YS+S EA + + + D K + ++AL + +A+++++ DM+
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDD--KHDCVFWNTMISALAQHGLGHKALRMLD-DMIKF 407
Query: 362 NCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLE 421
PN ++L + G L M+ + G D+E Y L+++L R + E
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 422 ASQLLEQMSIKSYWPCADSYNSLIKGLCSL 451
+ +E+M + P +N+++ G+C +
Sbjct: 468 LMRKIEEMPFE---PDKHIWNAIL-GVCRI 493
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 151/364 (41%), Gaps = 24/364 (6%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTVFASAINIYANAGLVDEAITLFKNI 106
Y + L +GR+G+ ++ +M TV+ + I Y + G D+A+ F +
Sbjct: 254 TYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDEL 313
Query: 107 PQFNCVNWTQSFN-TLLQIMV----SEDRLEAAHGLFVDNSCGWEVKSRVHAL--NLLMY 159
+ C + N T ++ ++ +E+ L + K R+H N+L+
Sbjct: 314 -KSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLL-------DKKFRMHPPTGNVLLE 365
Query: 160 ALCGKGRSDLALQIFQEMDYQGCYPN-----RDSYAILMKGLCHDGRLHEATHLLYSMFW 214
G+ D A +F EM PN D+ I++ G EA + +
Sbjct: 366 VFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGS 425
Query: 215 RISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDG 274
+++ K D + Y ++ CE G EA ++ + + L A + + +
Sbjct: 426 KVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAE 485
Query: 275 RDIEGTKRLIHEALIKGSVPSLSSYNAMAV-DLYSESKIDEADKVIVEMQDRGFKPTRAI 333
R + K L + ++ ++ ++ + A +L K+ E+ +V+ +M +R KP +I
Sbjct: 486 RIDDAVKML--DRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSI 543
Query: 334 FEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKM 393
++ V LC +D+A ++ E M+ N + + +++ G + + LN +
Sbjct: 544 YDVVVRGLCDGDALDQAKDIVGE-MIRHNVGVTTVLREFIIEVFEKAGRREEIEKILNSV 602
Query: 394 SKKV 397
++ V
Sbjct: 603 ARPV 606
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 306 LYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLP 365
L S +D A K+ + +PT A +AA+ + R E+I + + N +P
Sbjct: 155 LIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVP 214
Query: 366 NSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQL 425
N YN ++ + GN LE + TY L + L + R +A+ L
Sbjct: 215 NVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASL 274
Query: 426 LEQMSIKSYWPCADS--YNSLIKGLCSLGRQYEAVMWLEDMISQ 467
L +M K ADS YN+LI+G LG +AV + +++ S+
Sbjct: 275 LREMLSKGQ--AADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK 316
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 189/447 (42%), Gaps = 61/447 (13%)
Query: 59 GRLGEMRDVIEQMRQDSCECKDTV-FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQS 117
G LGE +V + M + +D V + + I++ G ++A+ ++K + C + S
Sbjct: 86 GDLGEACEVFDGMPE-----RDVVSWNNMISVLVRKGFEEKALVVYKRMV---CDGFLPS 137
Query: 118 FNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRV-------HALNLLMYALCGKGRSDLA 170
TL ++ + ++ G+F G VK+ + +AL L MYA CG D
Sbjct: 138 RFTLASVLSACSKV--LDGVFGMRCHGVAVKTGLDKNIFVGNAL-LSMYAKCGF-IVDYG 193
Query: 171 LQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRT 230
+++F+ + PN SY ++ GL + ++ EA MF + +KG D V
Sbjct: 194 VRVFESLSQ----PNEVSYTAVIGGLARENKVLEAVQ----MFRLMCEKGVQVDSVCLSN 245
Query: 231 LL---------DALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTK 281
+L D+L E E +I LR G N L L + +D+ G +
Sbjct: 246 ILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSL-LEIYAKNKDMNGAE 304
Query: 282 RLIHEALIKGSVPSLS--SYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVA 339
LI +P ++ S+N M V E + D++ + + M+D GF+P + +
Sbjct: 305 ------LIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 358
Query: 340 ALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGC 399
A + V+ ++ P+ +N +L N + + + +M +
Sbjct: 359 ACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ-NL 412
Query: 400 TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNS-LIKGLCSLGRQYEAV 458
D+ T ++L C R+LE + + + I++ S NS ++ GL ++ + E
Sbjct: 413 KPDKTTLSVILSS-CARLRFLEGGKQIHGVVIRT----EISKNSHIVSGLIAVYSECEK- 466
Query: 459 MWLEDMISQGKLPE--ISVWKSLASLF 483
M + + I + E I+ W S+ S F
Sbjct: 467 MEISECIFDDCINELDIACWNSMISGF 493
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 2/217 (0%)
Query: 213 FWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS 272
F R+ + G D V Y +LD + GK EE + + + + G K ++ L
Sbjct: 244 FERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG-KMFG 302
Query: 273 DGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRA 332
+ D +G + ++ E P++ YN + + K A + EM + G P
Sbjct: 303 EAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEK 362
Query: 333 IFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNK 392
A V K +A+++ EE M A + +YN LL ++G N
Sbjct: 363 TLTALVKIYGKARWARDALQLWEE-MKAKKWPMDFILYNTLLNMCADIGLEEEAERLFND 421
Query: 393 MSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQM 429
M + V C D +Y +L + + +A +L E+M
Sbjct: 422 MKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEM 458
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 49 ATMISILGTSGRLGEMRDVIEQM-RQDSCECKDTVFASAINIYANAGLVDEAITLFKNIP 107
++++L +G + R+++E+M + F S I +E + K +
Sbjct: 214 TVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLME 273
Query: 108 QFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHAL--NLLMYALCGKG 165
+ + + S+ L+ S ++E A L + + K RV + NL+M G
Sbjct: 274 KESVMLDLDSYKVLIDGFTSYGKVEEAERLVL---MMHDKKLRVESYLYNLIMNGYSRFG 330
Query: 166 RSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDI 225
+ ++++ EM +G PN+D+Y +LM GLC G++ EA L + R+++ E++
Sbjct: 331 LVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNEL--RVNEFEIDEEM 388
Query: 226 VVYRTLLDALCEDGKFEEAIEILSKILRKGL 256
Y TL + G ++++E++++++R G
Sbjct: 389 --YSTLSEECYRVGMIDKSLEVVAEMIRDGF 417
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 148/351 (42%), Gaps = 51/351 (14%)
Query: 139 VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
V + CG E K N ++ G+ +++F+ M + + + + L
Sbjct: 127 VIDECGCEKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKR 186
Query: 199 DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTL---LDALCEDGKFEEAIEILSKI-LRK 254
++ A M +G D+V +L + LC +G+ A E++ ++ L K
Sbjct: 187 CDQMELARDFFSLMV------ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVK 240
Query: 255 GLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVP-SLSSYNAMAVDLYSESKID 313
G+KA + + + C D E L+ + + K SV L SY + S K++
Sbjct: 241 GVKANIVTFKSM-IGCCVKRWDFEELD-LVLKLMEKESVMLDLDSYKVLIDGFTSYGKVE 298
Query: 314 EADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNIL 373
EA+++++ M D+ RV+ S +YN++
Sbjct: 299 EAERLVLMMHDKKL------------------RVE------------------SYLYNLI 322
Query: 374 LKNLRNVGNSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKS 433
+ G V+E ++MS + G T +++TY +L+ LC+ + EA L ++ +
Sbjct: 323 MNGYSRFGLVEKVIELYSEMSSR-GVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE 381
Query: 434 YWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLA-SLF 483
+ + Y++L + +G +++ + +MI G +P ++ + LA SLF
Sbjct: 382 FEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLF 432
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 139/319 (43%), Gaps = 15/319 (4%)
Query: 74 DSCECKDTV----FASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSE- 128
D C C+ V F S I +Y++ G E + +F+ + N V + TL + +
Sbjct: 129 DECGCEKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYMKN-NEVKIDEKTCTLHLLNLKRC 187
Query: 129 DRLEAAHGLF-VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMD-YQGCYPNR 186
D++E A F + G +V + V++L +++ LC G A ++ +EM +G N
Sbjct: 188 DQMELARDFFSLMVESGIDVVT-VYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANI 246
Query: 187 DSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIE 246
++ ++ G C E L+ + + ++ D+ Y+ L+D GK EEA
Sbjct: 247 VTFKSMI-GCCVKRWDFEELDLVLKL---MEKESVMLDLDSYKVLIDGFTSYGKVEEAER 302
Query: 247 ILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDL 306
++ + K L+ YN L ++ S +E L E +G P+ +Y + L
Sbjct: 303 LVLMMHDKKLRVESYLYN-LIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGL 361
Query: 307 YSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPN 366
K+ EA + E++ F+ ++ +V +D++++V+ E M+ +P
Sbjct: 362 CKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAE-MIRDGFIPG 420
Query: 367 SEVYNILLKNLRNVGNSAA 385
+ + L +L V A
Sbjct: 421 ATICERLADSLFEVNRKEA 439
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 165 GRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGED 224
G D A ++F+EM +G PN +Y +++GLC G EA LL M +G +
Sbjct: 738 GELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM----ESRGCNPN 793
Query: 225 IVVYRTLLDALCEDGKFEEAIEILSKILRKG 255
VVY TL+ L + GK EA +++ ++++KG
Sbjct: 794 FVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Query: 342 CKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSA-AVLESLNKMSKKVGCT 400
C+ V + + V ++ + L +++ I+L ++ GN A L +LN M K+VG
Sbjct: 663 CQFKSVLDELNVRVSGILVIGVLDGTQLLLIILLHILGKGNKPLAALTTLNHM-KEVGID 721
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMW 460
Y L++ +A ++ +M++K P +YNS+I+GLC G EA
Sbjct: 722 PSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWL 781
Query: 461 LEDMISQGKLPEISVWKSLAS 481
L++M S+G P V+ +L
Sbjct: 782 LKEMESRGCNPNFVVYSTLVG 802
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 7/197 (3%)
Query: 79 KDTVFASAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLF 138
K T F IN ++G + L N N + +F L LE +
Sbjct: 38 KTTEFDKLINEAGSSGDFETVRRLLNNRIVLGSFNTSDTFKFLTNTASYSSYLEDLRRVL 97
Query: 139 VDNSCGWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCH 198
G+ SR +A ++L+ LC GR D AL + +M +Y ++ L
Sbjct: 98 PQIDGGF---SRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTR 154
Query: 199 DGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKA 258
++ EA ++ SM K D+ Y L + C DG+ E A E++ KI G
Sbjct: 155 KYKIEEAWRVVESM----RSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSP 210
Query: 259 PKRCYNRLDLSQCSDGR 275
R Y+ L L C G+
Sbjct: 211 DSRSYDALVLGACRAGK 227
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 268 LSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
+++ D E +RL++ ++ GS + ++ + S +++ +V+ ++ D GF
Sbjct: 46 INEAGSSGDFETVRRLLNNRIVLGSFNTSDTFKFLTNTASYSSYLEDLRRVLPQI-DGGF 104
Query: 328 KPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAA-- 385
A ++ ++ LCK+ R+D+A+ VI + L S + IL R A
Sbjct: 105 SRKNA-YDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWR 163
Query: 386 VLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLI 445
V+ES+ S + TA Y L C + AS+++ ++ P + SY++L+
Sbjct: 164 VVESMRSKSVSMDVTA----YNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALV 219
Query: 446 KGLCSLGRQYEAVMWLEDMISQG 468
G C G+ A+ L M G
Sbjct: 220 LGACRAGKVEAAMAILRRMEEDG 242
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 166/421 (39%), Gaps = 49/421 (11%)
Query: 99 AITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVKSRVHALNLLM 158
A ++ K + C+ + +N L++ + +E + AA + + + S L +L+
Sbjct: 723 AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCL-MLI 781
Query: 159 YALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQ 218
LC ++ A + +++D + YA L+KGL G++ +A + L M
Sbjct: 782 PRLCRANKAGTAFNLAEQIDSSYVH-----YA-LIKGLSLAGKMLDAENQLRIML----S 831
Query: 219 KGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIE 278
G +Y + C+ + + E+L ++RK + + Y C + + +
Sbjct: 832 NGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLS 891
Query: 279 GTKRLIHEALIKG-SVPS-LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEA 336
+ E L+ G S P + YN + ++ E +KV++EMQ RG P F
Sbjct: 892 AIS--LKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNF 949
Query: 337 KVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
V + +++ + M++ PN+ + +L + G+ L+ M K
Sbjct: 950 LVHGYSSSADYSSSLRYLSA-MISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESK 1008
Query: 397 -------VGCTADRETYIILLEM------LCR-------------------ERRYLE-AS 423
V T ET I E+ L R +R L+ A
Sbjct: 1009 GWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAV 1068
Query: 424 QLLEQMSIKSYWPCADSYNSLIKGLCSLGRQYEAVMWLEDMISQGKLPEISVWKSLASLF 483
LL M P + SY+S+I GL + +A+ + +M+ G P IS W L F
Sbjct: 1069 HLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKF 1128
Query: 484 C 484
C
Sbjct: 1129 C 1129
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 139/340 (40%), Gaps = 13/340 (3%)
Query: 151 VHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
V N ++++LC + S+ A +E+++ G + ++ IL+ C++G + A L
Sbjct: 323 VFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLS 382
Query: 211 SMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQ 270
I KG D+ Y +L L G ++ IL ++ G+ + +
Sbjct: 383 ----EIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGY 438
Query: 271 CSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPT 330
C R E KR++++ G + + + ++ + +S D + D F +
Sbjct: 439 CK-ARQFEEAKRIVNKMFGYGLIEASKVEDPLS-EAFSLVGFDPLAVRLKRDNDSTF--S 494
Query: 331 RAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESL 390
+A F + + +A + ++ + LP +N L+ G+ L L
Sbjct: 495 KAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLL 551
Query: 391 NKMSKKVGCTADRETYIILLEMLCRERRYLEAS-QLLEQMSIKSYWPCADSYNSLIKGLC 449
++M+ + G R ++ +L+ LC R +L S LLE+ +Y ++ N L++ C
Sbjct: 552 DEMA-RWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYC 610
Query: 450 SLGRQYEAVMWLEDMISQGKLPEISVWKSLASLFCNLEMM 489
G + + M+ + + SL FC E +
Sbjct: 611 KKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETL 650
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 131/341 (38%), Gaps = 46/341 (13%)
Query: 85 SAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCG 144
S +++YAN G + A +F + + V+WT + + E+ E + N
Sbjct: 157 SLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFT 216
Query: 145 WEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRL-- 202
W + +A N + A+ +F+ M +G N ++ H G L
Sbjct: 217 WSIMINGYAKNNCF---------EKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF 267
Query: 203 -----------HEATHL-----LYSMFWRISQ--------KGNGE-DIVVYRTLLDALCE 237
H +L L MFWR +G E D + + +++ L
Sbjct: 268 GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 238 DGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKRLIHEALIK--GSVPS 295
G +A+ S+++ G P+ LS CS G +E I+E + K G P
Sbjct: 328 HGHAHKAMHYFSQMISLGF-IPRDVTFTAVLSACSHGGLVEKGLE-IYENMKKDHGIEPR 385
Query: 296 LSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIE 355
L Y + L K+ EA+ I++M KP I A + A CK+ + E + +
Sbjct: 386 LEHYGCIVDMLGRAGKLAEAENFILKMH---VKPNAPILGALLGA-CKIYKNTEVAERVG 441
Query: 356 EDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKK 396
++ V P Y +LL N+ +ESL M K+
Sbjct: 442 NMLIKVK--PEHSGYYVLLSNIYACAGQWDKIESLRDMMKE 480
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 156/376 (41%), Gaps = 33/376 (8%)
Query: 87 INIYANAGLVDEAITL-FKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGW 145
+N+YA + EA L F++I N V WT + L+ + ++N+
Sbjct: 153 MNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENA--- 209
Query: 146 EVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEA 205
EV + + + + A QI + +G N ++ C G L EA
Sbjct: 210 EVTP--YCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEA 267
Query: 206 THLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNR 265
H + M +D++ + TL+ L E EA+ + + +G P CY
Sbjct: 268 KHYFHEM--------EDKDLITWNTLISEL-ERSDSSEALLMFQRFESQGF-VPN-CYTF 316
Query: 266 LDL-SQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSE-SKIDEADKVIVEMQ 323
L + C++ + ++L +G ++ NA+ +D+Y++ I ++ +V E+
Sbjct: 317 TSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANAL-IDMYAKCGNIPDSQRVFGEIV 375
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
DR + + + EA+++ ++ MV+ P+ V+ +L R+ G
Sbjct: 376 DR---RNLVSWTSMMIGYGSHGYGAEAVELFDK-MVSSGIRPDRIVFMAVLSACRHAGLV 431
Query: 384 AAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIK---SYWPC--- 437
L+ N M + G DR+ Y ++++L R + EA +L+E+M K S W
Sbjct: 432 EKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILG 491
Query: 438 ---ADSYNSLIKGLCS 450
A +N LI L +
Sbjct: 492 ACKAHKHNGLISRLAA 507
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 155/392 (39%), Gaps = 62/392 (15%)
Query: 97 DEAITLFKNIPQFNCVNWTQSFNTLL--QIMVSEDRLEAAHGLFVDNSCGWEVKSRVHAL 154
D+A+ ++K++ + + + L Q + R L + ++K+ L
Sbjct: 47 DKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETF-L 105
Query: 155 NLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFW 214
+ L+ + D A+++F+EMD G S+ L+ H L F
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQL----FD 161
Query: 215 RISQKGNG--EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCS 272
Q+ N D + Y L+ + C+ GK E+A+EI+
Sbjct: 162 EFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIM------------------------ 197
Query: 273 DGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRA 332
RD+E +KG ++ ++ + LY +DEA+ + +EM ++G
Sbjct: 198 --RDME----------VKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNT 245
Query: 333 IFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNK 392
++ ++ K S E +K + E+M +V P++ YN L+ +A ++ +
Sbjct: 246 VYNVRLMNAAKES--PERVKELMEEMSSVGLKPDTVSYNYLM--------TAYCVKGMMS 295
Query: 393 MSKKV--GC-TADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSYNSLIKGLC 449
+KKV G + T+ L+ LC Y + + ++ +I P + L +GL
Sbjct: 296 EAKKVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLV 355
Query: 450 SLGRQYEAVMWLEDMISQGKLPE--ISVWKSL 479
R +A I + K P ++ WK L
Sbjct: 356 KNNRMEDARGVAR--IVKKKFPPRLVTEWKKL 385
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 6/196 (3%)
Query: 148 KSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATH 207
K V N+L+ A C + A IF+++ + P+ + IL+ G G + AT
Sbjct: 173 KFGVDEFNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDV-TATE 230
Query: 208 LLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLD 267
L Y + ++G + V Y +D C+ F EA+ + + R + L
Sbjct: 231 LFYH---EMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTL- 286
Query: 268 LSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGF 327
+ R+ ++L E +G P +YNA+ L + A KV+ EM+++G
Sbjct: 287 IHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGI 346
Query: 328 KPTRAIFEAKVAALCK 343
+P F + + K
Sbjct: 347 EPDSVTFHSMFIGMMK 362
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 123/306 (40%), Gaps = 58/306 (18%)
Query: 27 ALHIFNEAKSRYPKYTHNGPVYATMISILGTSGRLG--EMRDVIEQMRQDSCECKDTVFA 84
A+ +F E K + P Y T++S+L RLG E+ + + +DS D V
Sbjct: 258 AVEVFREMKKGDIR-----PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 85 SA-INIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSC 143
SA I++Y+ G++++AI +F+ +P+ N + W+ N A HG D
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGF-----------AIHGQAGD--- 358
Query: 144 GWEVKSRVHALNLLMYALCGKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLH 203
A+ F +M G P+ +Y L+ H G +
Sbjct: 359 --------------------------AIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Query: 204 EATHLLYSMFWRISQKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCY 263
E M +S G I Y ++D L G +EA E IL +K +
Sbjct: 393 EGRRYFSQM---VSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF---ILNMPIKPDDVIW 446
Query: 264 NRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLS-SYNAMAVDLYSESKIDEADKVIVEM 322
L L C ++E KR+ + ++ VP S +Y A++ S+ E ++ + M
Sbjct: 447 KAL-LGACRMQGNVEMGKRVAN--ILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 503
Query: 323 QDRGFK 328
+++ +
Sbjct: 504 KEKDIR 509
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 127/298 (42%), Gaps = 45/298 (15%)
Query: 153 ALNLLMYALCGKGRSDL-ALQIFQEMDYQ-GCYPNRDSYAILMKGLCHDGRLHEATHLLY 210
ALN+L GK R + AL +F M Q YP+ +Y + L G + E +++
Sbjct: 513 ALNVL-----GKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVID 567
Query: 211 SMFWRISQKGNG-----------EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAP 259
+M +K D+VVY +L+A + ++E A +L ++ ++G K
Sbjct: 568 TMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPS 627
Query: 260 KRCYNRL--DLSQCSDGRDIEGTKRLIHE---ALIKGSVPSLSSYNAMAVDLYSESKIDE 314
Y + + C L+HE + K S+P+ +Y + L+ E K DE
Sbjct: 628 PVTYGLIMEVMLACE-------KYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDE 680
Query: 315 ADKVIVEMQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILL 374
A + +M+ RG + A++ LC R +E + ++ + V ++L
Sbjct: 681 AVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMV------------NFVNPVVL 728
Query: 375 KNLRNVGNSAAVLESLNKMSKKVGCTADRE---TYIILLEMLCRERRYLEASQLLEQM 429
K + N+ A ++ ++ KK+ A++ TY L++ A+ + +QM
Sbjct: 729 KLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQM 786
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 159/393 (40%), Gaps = 35/393 (8%)
Query: 47 VYATMISILGTSGRLGEMRDVIEQMRQDSCECKDTV-FASAINIYANAGLVDEAITLFKN 105
V + + + GR+ R+V ++M +D V + + I Y GLVDEA LF+
Sbjct: 148 VETGFMDMYASCGRINYARNVFDEMSH-----RDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 106 IPQFNCVNWTQSFNTLLQIMVSEDRLE---AAHGLFVDNSCGWEVKSRVHALNLLMYALC 162
+ N + ++ + A + ++N +V+ H L L+
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN----DVRMDTHLLTALVTMYA 258
Query: 163 GKGRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNG 222
G G D+A + F++M + + + ++ G GRL +A I +
Sbjct: 259 GAGCMDMAREFFRKMSVRNLFVS----TAMVSGYSKCGRLDDAQ--------VIFDQTEK 306
Query: 223 EDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKRCYNRLDLSQCSDGRDIEGTKR 282
+D+V + T++ A E +EA+ + ++ G+K P +S C++ ++ K
Sbjct: 307 KDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK-PDVVSMFSVISACANLGILDKAK- 364
Query: 283 LIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQDRGFKPTRAI--FEAKVAA 340
+H + + S S N +++Y++ +A + + E P R + + + + A
Sbjct: 365 WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM-----PRRNVVSWSSMINA 419
Query: 341 LCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNSAAVLESLNKMSKKVGCT 400
L +A+ + M N PN + +L + G + M+ + T
Sbjct: 420 LSMHGEASDALSLFAR-MKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT 478
Query: 401 ADRETYIILLEMLCRERRYLEASQLLEQMSIKS 433
E Y ++++ R EA +++E M + S
Sbjct: 479 PKLEHYGCMVDLFGRANLLREALEVIESMPVAS 511
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 172/403 (42%), Gaps = 38/403 (9%)
Query: 89 IYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAAHGLFVDNSCGWEVK 148
+Y G V A LF +P N V+W + ++++ + + +E F C +K
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGME-----FFRKMCDLGIK 55
Query: 149 SRVHALNLLMYALCGKGRSDLALQIFQE-MDYQGCYPNRDSYAILMKGLCHDGRLHEATH 207
+ L+ A CG+ S +F+E + G + GL D + A
Sbjct: 56 PSSFVIASLVTA-CGRSGS-----MFREGVQVHGF--------VAKSGLLSDVYVSTAIL 101
Query: 208 LLYSMFWRIS------QKGNGEDIVVYRTLLDALCEDGKFEEAIEILSKILRKGLKAPKR 261
LY ++ +S ++ ++V + +L+ + G+ EE I+I + +G+ +
Sbjct: 102 HLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNEN 161
Query: 262 CYNRLDLSQCSDGRDIEGTKRLIHEALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVE 321
+ L +S C +D +++I + + G L+ N++ L S +D A+ + +
Sbjct: 162 SMS-LVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQ 220
Query: 322 MQDRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVG 381
M +R +I AA + ++E+ ++ M + NS + LL L +V
Sbjct: 221 MSERDTISWNSI----AAAYAQNGHIEESFRIFSL-MRRFHDEVNSTTVSTLLSVLGHV- 274
Query: 382 NSAAVLESLNKMSKKVGCTADRETYIILLEMLCRERRYLEASQLLEQMSIKSYWPCADSY 441
+ ++ + K+G + LL M R +EA+ + +QM K S+
Sbjct: 275 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLI----SW 330
Query: 442 NSLIKGLCSLGRQYEAVMWLEDMISQGK-LPEISVWKSLASLF 483
NSL+ + GR +A+ L MIS GK + ++ +LA+ F
Sbjct: 331 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 373
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 158/412 (38%), Gaps = 89/412 (21%)
Query: 85 SAINIYANAGLVDEAITLFKNIPQFNCVNWTQSFNTLLQIMVSEDRLEAA---HGLFVDN 141
S I YAN+ + A+T+F+ + SF +L+ + E HGLF+ +
Sbjct: 110 SVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKS 169
Query: 142 ------------------SCGWEVKSRVH---------ALNLLMYALCGKGRSDLALQIF 174
S +E+ +V + N L+ A KG D A +F
Sbjct: 170 GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALF 229
Query: 175 QEMDYQGCYPNRDSYAILMKGLCHDGRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDA 234
EM+ + N +S+ ++ G G + EA + SM R D+V + ++ A
Sbjct: 230 DEMEER----NVESWNFMISGYAAAGLVKEAKEVFDSMPVR--------DVVSWNAMVTA 277
Query: 235 LCEDGKFEEAIEILSKILRKGLKAP---------KRCYNRLDLSQCS--------DGRDI 277
G + E +E+ +K+L + P C + LSQ G +I
Sbjct: 278 YAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI 337
Query: 278 EG--TKRLIH------------EALIKGSVPSLSSYNAMAVDLYSESKIDEADKVIVEMQ 323
EG L+ E S +S++N++ DL +A ++ EM
Sbjct: 338 EGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV 397
Query: 324 DRGFKPTRAIFEAKVAALCKVSRVDEAIKVIEEDMVAVNCLPNSEVYNILLKNLRNVGNS 383
GFKP F ++A V +D+A K+ E P E Y ++ L +G
Sbjct: 398 YEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKI 457
Query: 384 AAVLESLNKMSKKVGCTADRETYIILLEML---CRERRYLE-----ASQLLE 427
E +N++ AD + ILLE L C+ LE A++LLE
Sbjct: 458 EEAEELVNEIP------ADEAS--ILLESLLGACKRFGQLEQAERIANRLLE 501