Miyakogusa Predicted Gene

Lj2g3v0636560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0636560.1 Non Chatacterized Hit- tr|I1KKH6|I1KKH6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,72.92,0.000000009,
,NODE_107774_length_725_cov_7.645517.path1.1
         (100 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G45616.1 | Symbols: AtRLP6, RLP6 | receptor like protein 6 | ...    52   1e-07

>AT1G45616.1 | Symbols: AtRLP6, RLP6 | receptor like protein 6 |
           chr1:17183550-17186534 REVERSE LENGTH=994
          Length = 994

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 2/53 (3%)

Query: 2   GVTCD-KKGHVSGLDLSEESICGGLD-NSSLFNLQHLMKLNLAYNPFGSFNVP 52
           G+TCD K G V+GLDLS   + G L+ NSSLF LQHL  +NLAYN F +  +P
Sbjct: 89  GITCDTKSGKVTGLDLSCSCLHGRLEPNSSLFRLQHLQSVNLAYNNFTNSPIP 141