Miyakogusa Predicted Gene

Lj2g3v0636070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0636070.1 tr|G7KII8|G7KII8_MEDTR 3,4-dihydroxy-2-butanone
kinase (Fragment) OS=Medicago truncatula GN=MTR_6g07,69.44,3e-19,no
description,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; DHAK,Dak kinase; Dak,CUFF.35139.1
         (77 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17770.1 | Symbols:  | Dihydroxyacetone kinase | chr3:6081973...   103   2e-23
AT1G48430.1 | Symbols:  | Dihydroxyacetone kinase | chr1:1790287...    99   5e-22

>AT3G17770.1 | Symbols:  | Dihydroxyacetone kinase |
          chr3:6081973-6085957 REVERSE LENGTH=595
          Length = 595

 Score =  103 bits (258), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 57/72 (79%), Gaps = 2/72 (2%)

Query: 6  AKKLINDPLDVVNEYIEGLVETYPGLDYLEGFPQVKVVFRADIPCGKGTYDKVAVISXXX 65
          AKK IN+P DVV E+IEGLVETYPGL YL+GFP+VKVV RAD+   K  YDKVAVIS   
Sbjct: 5  AKKFINNPNDVVTEFIEGLVETYPGLQYLDGFPEVKVVLRADVSAAK--YDKVAVISGGG 62

Query: 66 XXHEPAHAGFVG 77
            HEPAHAG+VG
Sbjct: 63 SGHEPAHAGYVG 74


>AT1G48430.1 | Symbols:  | Dihydroxyacetone kinase |
          chr1:17902874-17906689 REVERSE LENGTH=593
          Length = 593

 Score = 99.0 bits (245), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 2/73 (2%)

Query: 5  PAKKLINDPLDVVNEYIEGLVETYPGLDYLEGFPQVKVVFRADIPCGKGTYDKVAVISXX 64
          PAKK IN+P DVV E+IEGLVETYPGL YL+G P++KVV RAD+      YDKVAVIS  
Sbjct: 4  PAKKFINNPNDVVTEFIEGLVETYPGLQYLDGLPEIKVVLRADVSAAN--YDKVAVISGG 61

Query: 65 XXXHEPAHAGFVG 77
             HEPA AG+VG
Sbjct: 62 GSGHEPAQAGYVG 74