Miyakogusa Predicted Gene

Lj2g3v0635710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0635710.1 Non Chatacterized Hit- tr|B9RFL4|B9RFL4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,32.89,0.00000000000003,Agenet,Agenet-like domain; Tudor-like domain
present in plant sequences,Tudor-like, plant,CUFF.35056.1
         (191 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09320.1 | Symbols:  | agenet domain-containing protein | chr...    67   7e-12
AT3G06520.1 | Symbols:  | agenet domain-containing protein | chr...    60   6e-10
AT1G06340.1 | Symbols:  | Plant Tudor-like protein | chr1:193358...    53   1e-07
AT2G47230.2 | Symbols: DUF6 | DOMAIN OF UNKNOWN FUNCTION 724 6 |...    47   6e-06
AT2G47230.1 | Symbols: DUF6, ATDUF6 | DOMAIN OF UNKNOWN FUNCTION...    47   7e-06

>AT1G09320.1 | Symbols:  | agenet domain-containing protein |
           chr1:3010270-3012228 REVERSE LENGTH=517
          Length = 517

 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 14/146 (9%)

Query: 40  KELFRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDD 99
           K+ F IG  +EVS + +G+  +WFLA+++E + + K LVE+ +   +   + L+E+++  
Sbjct: 377 KQAFSIGTPIEVSPEEEGFEDSWFLAKLIEYRGKDKCLVEYDNLKAEDGKEPLREEVNVS 436

Query: 100 HIRPLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMIRKVHGNNTYDVWL 159
            IRPLP  ++               + ++  D+V+A Y +GW V +IRKV   ++Y V L
Sbjct: 437 RIRPLPLESVMV-------------SPFERHDKVNALYNDGWWVGVIRKVLAKSSYLV-L 482

Query: 160 EGDPQPLDGLTPSQLRRHYDRAGCDW 185
             + Q L     SQLR H +     W
Sbjct: 483 FKNTQELLKFHHSQLRLHQEWIDGKW 508



 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 14/107 (13%)

Query: 40  KELFRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDD 99
           K++F  G +VEVSS  +G++G WF A+VVE   + KFLVE++        + LKE+ D  
Sbjct: 218 KQMFSSGTVVEVSSDEEGFQGCWFAAKVVEPVGEDKFLVEYRDLREKDGIEPLKEETDFL 277

Query: 100 HIRPLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMI 146
           HIRP PP               D +  + + D+++A Y +GW V ++
Sbjct: 278 HIRPPPPR--------------DEDIDFAVGDKINAFYNDGWWVGVV 310


>AT3G06520.1 | Symbols:  | agenet domain-containing protein |
           chr3:2020284-2021955 FORWARD LENGTH=466
          Length = 466

 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 16/165 (9%)

Query: 30  RAKLQLLVFLKELFRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEH-KHRLHDVT 88
           R KL++ +  ++ +  G LVEV S+ K Y+G+W+ A ++ L    K++VEH K    D  
Sbjct: 156 RIKLKIKIKRRDQYEKGALVEVRSEEKAYKGSWYCARILCLLGDDKYIVEHLKFSRDDGE 215

Query: 89  GKLLKEKIDDDHIRPLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMIRK 148
              L++ ++   IRP+PP+ L+            P   Y+    VDA + + W  + + K
Sbjct: 216 SIPLRDVVEAKDIRPVPPSELS------------PVVCYEPGVIVDAWFNKRWWTSRVSK 263

Query: 149 V--HGNNTYDVWLEGDPQPLDGLTPSQLRRHYDRAGCDWDVASQV 191
           V   G+N Y V++    +    L    LR H D     W + S+V
Sbjct: 264 VLGGGSNKYSVFIISTGEETTILN-FNLRPHKDWINGQWVIPSKV 307



 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 17/158 (10%)

Query: 25  CWMDFRAKLQLLVFLKELFRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRL 84
           C+     KL+     +++F  G  VEV S   GY  +WF A++V    + ++ VE++   
Sbjct: 315 CYKPPLKKLKSCERAEKVFNNGMEVEVRSDEPGYEASWFSAKIVSYLGENRYTVEYQTLK 374

Query: 85  HDVTGKLLKEKIDDDHIRPLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVA 144
            D   +LLKE+     IRP PP  +                +Y+L + VDA Y EGW   
Sbjct: 375 TDDERELLKEEARGSDIRPPPPPLIPK------------GYRYELYELVDAWYNEGWWSG 422

Query: 145 MIRKVHGNNT-YDVWLEGDPQPLD----GLTPSQLRRH 177
            + K++ N T Y V+ +   + L+     L P Q+ R+
Sbjct: 423 RVYKINNNKTRYGVYFQTTDESLEFAYNDLRPCQVWRN 460


>AT1G06340.1 | Symbols:  | Plant Tudor-like protein |
           chr1:1933583-1933987 REVERSE LENGTH=134
          Length = 134

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 18/145 (12%)

Query: 43  FRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFL-VEHKHRLHDV-TGKLLKEKIDDDH 100
           F  GD VEV SK  G+ G++F A VV    +G +  +++K+ + D    K L E I  D 
Sbjct: 3   FVKGDQVEVCSKEDGFLGSYFGATVVSKTPEGSYYKIKYKNLVSDTDQSKRLVEVISADE 62

Query: 101 IRPLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMIRKVHGNNTYDVWLE 160
           +RP+PP +L              +   +  D+VDA   +GW V  +  V   N Y V+  
Sbjct: 63  LRPMPPKSL--------------HVLIRCGDKVDAFDKDGWWVGEVTAVR-RNIYSVYFS 107

Query: 161 GDPQPLDGLTPSQLRRHYDRAGCDW 185
              + L+    S LR+H++     W
Sbjct: 108 TTDEELEYPLYS-LRKHHEWVNGSW 131


>AT2G47230.2 | Symbols: DUF6 | DOMAIN OF UNKNOWN FUNCTION 724 6 |
           chr2:19387126-19390011 FORWARD LENGTH=709
          Length = 709

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 21/139 (15%)

Query: 26  WMDFRAKLQLLVFLKELFRIGDLVEVSSKVKGYRGTWFLAEVV-ELKVQG--KFLVE--H 80
           W   R  +Q L   K +F  G + EVS+ V      WF A ++ E++V G  KF+V+  +
Sbjct: 135 WKWLRPDIQELD--KSMFSSGTMAEVSTIVDKAEVAWFPAMIIKEIEVDGEKKFIVKDCN 192

Query: 81  KHRLHDVTGKLLKEKIDDDHIRPLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEG 140
           KH             ID   +RP PP                P  KY+L+DRV+      
Sbjct: 193 KHLSFSGDEARTNSTIDSSRVRPTPPPF--------------PVEKYELMDRVEVFRGSV 238

Query: 141 WSVAMIRKVHGNNTYDVWL 159
           W   ++R V  +N Y V L
Sbjct: 239 WRQGLVRGVLDHNCYMVCL 257


>AT2G47230.1 | Symbols: DUF6, ATDUF6 | DOMAIN OF UNKNOWN FUNCTION
           724 6 | chr2:19387126-19390011 FORWARD LENGTH=701
          Length = 701

 Score = 47.0 bits (110), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 21/139 (15%)

Query: 26  WMDFRAKLQLLVFLKELFRIGDLVEVSSKVKGYRGTWFLAEVV-ELKVQG--KFLVE--H 80
           W   R  +Q L   K +F  G + EVS+ V      WF A ++ E++V G  KF+V+  +
Sbjct: 135 WKWLRPDIQELD--KSMFSSGTMAEVSTIVDKAEVAWFPAMIIKEIEVDGEKKFIVKDCN 192

Query: 81  KHRLHDVTGKLLKEKIDDDHIRPLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEG 140
           KH             ID   +RP PP                P  KY+L+DRV+      
Sbjct: 193 KHLSFSGDEARTNSTIDSSRVRPTPPPF--------------PVEKYELMDRVEVFRGSV 238

Query: 141 WSVAMIRKVHGNNTYDVWL 159
           W   ++R V  +N Y V L
Sbjct: 239 WRQGLVRGVLDHNCYMVCL 257