Miyakogusa Predicted Gene
- Lj2g3v0632120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0632120.1 tr|J7ICW8|J7ICW8_PONTR Beta-amylase OS=Poncirus
trifoliata GN=BAM2 PE=2 SV=1,83.69,0,(Trans)glycosidases,Glycoside
hydrolase, superfamily; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NUL,TC62893.path1.1
(139 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23920.1 | Symbols: BAM1, BMY7, TR-BAMY | beta-amylase 1 | ch... 232 6e-62
AT4G17090.1 | Symbols: CT-BMY, BAM3, BMY8 | chloroplast beta-amy... 124 1e-29
AT5G55700.2 | Symbols: BAM4 | beta-amylase 4 | chr5:22551873-225... 89 7e-19
AT5G55700.1 | Symbols: BMY6, BAM4 | beta-amylase 4 | chr5:225518... 89 7e-19
AT4G00490.1 | Symbols: BAM2, BMY9 | beta-amylase 2 | chr4:222422... 89 9e-19
AT2G32290.1 | Symbols: BMY5, BAM6 | beta-amylase 6 | chr2:137146... 87 4e-18
AT4G15210.1 | Symbols: ATBETA-AMY, AT-BETA-AMY, RAM1, BMY1, BAM5... 86 8e-18
AT4G15210.2 | Symbols: ATBETA-AMY, AT-BETA-AMY, RAM1 | beta-amyl... 67 4e-12
AT2G45880.1 | Symbols: BMY4, BAM7 | beta-amylase 7 | chr2:188786... 58 2e-09
>AT3G23920.1 | Symbols: BAM1, BMY7, TR-BAMY | beta-amylase 1 |
chr3:8641722-8644199 FORWARD LENGTH=575
Length = 575
Score = 232 bits (592), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 111/144 (77%), Positives = 125/144 (86%), Gaps = 7/144 (4%)
Query: 1 MLARHGAVFNFTCIEMRDHEQPQDALCAPEKLVNQVALATQKAQVPLAGENALQRYDEHA 60
MLARH A+FNFTCIEMRDHEQPQDALCAPEKLVNQVALAT A+VPLAGENAL RYD++A
Sbjct: 428 MLARHNAIFNFTCIEMRDHEQPQDALCAPEKLVNQVALATLAAEVPLAGENALPRYDDYA 487
Query: 61 HEQILKSAQLNDD-------TEMCAFTYLRMNPQLFQPDNWRKFVSFVKKMKEGKGTHKC 113
HEQILK++ LN D EMCAFTYLRMNP+LFQ DNW KFV+FVKKM EG+ +H+C
Sbjct: 488 HEQILKASALNLDQNNEGEPREMCAFTYLRMNPELFQADNWGKFVAFVKKMGEGRDSHRC 547
Query: 114 WEQVEREAEHFVHVTRPLVQEAAL 137
E+VEREAEHFVHVT+PLVQEAA+
Sbjct: 548 REEVEREAEHFVHVTQPLVQEAAV 571
>AT4G17090.1 | Symbols: CT-BMY, BAM3, BMY8 | chloroplast
beta-amylase | chr4:9605266-9607250 REVERSE LENGTH=548
Length = 548
Score = 124 bits (312), Expect = 1e-29, Method: Composition-based stats.
Identities = 57/107 (53%), Positives = 75/107 (70%)
Query: 1 MLARHGAVFNFTCIEMRDHEQPQDALCAPEKLVNQVALATQKAQVPLAGENALQRYDEHA 60
M +HG V NFTC+EM+D EQP+ A C+PE LV QV AT++A LAGENAL+RYD A
Sbjct: 407 MFNKHGVVLNFTCMEMKDGEQPEHANCSPEGLVKQVQNATRQAGTELAGENALERYDSSA 466
Query: 61 HEQILKSAQLNDDTEMCAFTYLRMNPQLFQPDNWRKFVSFVKKMKEG 107
Q++ + + + + AFTYLRMN +LF+ NW++ V FVK MKEG
Sbjct: 467 FGQVVATNRSDSGNGLTAFTYLRMNKRLFEGQNWQQLVEFVKNMKEG 513
>AT5G55700.2 | Symbols: BAM4 | beta-amylase 4 |
chr5:22551873-22554702 FORWARD LENGTH=489
Length = 489
Score = 89.4 bits (220), Expect = 7e-19, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 1 MLARHGAVFNFTCIEMRDHEQPQDALCAPEKLVNQVALATQKAQVPLAGENALQRYDEHA 60
+L+RHGA N C++M D E P+ LC+PE L Q+ ++K + + G N +R+DE
Sbjct: 382 VLSRHGAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMG 441
Query: 61 HEQILKS-AQLNDDTEMCAFTYLRMNPQLFQPDNWRKFVSFVKKM 104
QI ++ Q N DT + +FT+ RMN ++F+ +NW FV F+++M
Sbjct: 442 LRQIRENCVQPNGDT-LRSFTFCRMNEKIFRVENWNNFVPFIRQM 485
>AT5G55700.1 | Symbols: BMY6, BAM4 | beta-amylase 4 |
chr5:22551873-22554702 FORWARD LENGTH=531
Length = 531
Score = 89.4 bits (220), Expect = 7e-19, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 1 MLARHGAVFNFTCIEMRDHEQPQDALCAPEKLVNQVALATQKAQVPLAGENALQRYDEHA 60
+L+RHGA N C++M D E P+ LC+PE L Q+ ++K + + G N +R+DE
Sbjct: 424 VLSRHGAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMG 483
Query: 61 HEQILKS-AQLNDDTEMCAFTYLRMNPQLFQPDNWRKFVSFVKKM 104
QI ++ Q N DT + +FT+ RMN ++F+ +NW FV F+++M
Sbjct: 484 LRQIRENCVQPNGDT-LRSFTFCRMNEKIFRVENWNNFVPFIRQM 527
>AT4G00490.1 | Symbols: BAM2, BMY9 | beta-amylase 2 |
chr4:222422-224862 FORWARD LENGTH=542
Length = 542
Score = 89.0 bits (219), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Query: 1 MLARHGAVFNFTCIEMRDHEQPQD---ALCAPEKLVNQVALATQKAQVPLAGENALQRYD 57
M +H A NFTC+E+R +Q +D AL PE LV QV A A +P+A ENAL YD
Sbjct: 413 MFKKHDAALNFTCVELRTLDQHEDFPEALADPEGLVWQVLNAAWDASIPVASENALPCYD 472
Query: 58 EHAHEQILKSAQLNDDTE---MCAFTYLRMNPQLFQPDNWRKFVSFVKKM 104
+ +IL++A+ D + + FTYLR+NP L + N+++F F+K+M
Sbjct: 473 REGYNKILENAKPLTDPDGRHLSCFTYLRLNPTLMESQNFKEFERFLKRM 522
>AT2G32290.1 | Symbols: BMY5, BAM6 | beta-amylase 6 |
chr2:13714643-13716906 REVERSE LENGTH=577
Length = 577
Score = 87.0 bits (214), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 12/136 (8%)
Query: 1 MLARHGAVFNFTCIEMRDHEQPQDALCAPEKLVNQVALATQKAQVPLAGENALQRYDEHA 60
++ RH A+ NFTC+EM++ EQP A P++LV QV + + + +AGENAL R+D +
Sbjct: 398 IMRRHHAILNFTCLEMKNTEQPAKAKSGPQELVQQVLSSGWREGIEVAGENALPRFDRNG 457
Query: 61 HEQILKSAQ---LNDDTE--MCAFTYLRMNPQLFQPDNWRKFVSFVKKMKEGKGTHKCWE 115
+ QI+ +A+ +N D + M FTYLR++ +L N+ F F+K+M +
Sbjct: 458 YNQIILNARPNGVNQDGKPRMFGFTYLRLSDKLLNEPNFSTFKMFLKRMHAN-------Q 510
Query: 116 QVEREAEHFVHVTRPL 131
+ E E + H PL
Sbjct: 511 EYCSEPERYNHELLPL 526
>AT4G15210.1 | Symbols: ATBETA-AMY, AT-BETA-AMY, RAM1, BMY1, BAM5 |
beta-amylase 5 | chr4:8666734-8669357 REVERSE LENGTH=498
Length = 498
Score = 85.9 bits (211), Expect = 8e-18, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 1 MLARHGAVFNFTCIEMRDHEQPQDALCAPEKLVNQVALATQKAQVPLAGENALQRYDEHA 60
ML++H + NFTC+EM+D + +AL AP++LV +V K + +AGENAL+ Y
Sbjct: 334 MLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQEVLSKAWKEGIEVAGENALETYGAKG 393
Query: 61 HEQILKSAQLND-------DTEMCAFTYLRMNPQLFQPDNWRKFVSFVKKM 104
+ QIL +A+ N M FTYLR++ +FQ +N+ F V+KM
Sbjct: 394 YNQILLNARPNGVNPNGKPKLRMYGFTYLRLSDTVFQENNFELFKKLVRKM 444
>AT4G15210.2 | Symbols: ATBETA-AMY, AT-BETA-AMY, RAM1 | beta-amylase
5 | chr4:8666852-8669357 REVERSE LENGTH=420
Length = 420
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 1 MLARHGAVFNFTCIEMRDHEQPQDALCAPEKLVNQVALATQKAQVPLAGENALQRYDEHA 60
ML++H + NFTC+EM+D + +AL AP++LV +V K + +AGENAL+ Y
Sbjct: 334 MLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQEVLSKAWKEGIEVAGENALETYGAKG 393
Query: 61 HEQILKSAQLN 71
+ QIL +A+ N
Sbjct: 394 YNQILLNARPN 404
>AT2G45880.1 | Symbols: BMY4, BAM7 | beta-amylase 7 |
chr2:18878674-18881824 REVERSE LENGTH=691
Length = 691
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 2 LARHGAVFNFTCIEMRDHEQPQD---ALCAPEKLVNQVALATQKAQVPLAGENALQRYDE 58
L +HGA +F E++ +P D AL PE + QV A + P+A EN+L +D
Sbjct: 567 LKKHGATLSFVSGEVQVLNRPDDFSGALGEPEAVAWQVLNAAWDSGTPVARENSLACHDR 626
Query: 59 HAHEQILKSAQLNDDTE---MCAFTYLRMNPQLFQPDNWRKFVSFVKKM 104
+ ++L+S + +D + + +F Y R+ P L + N +F FVKK+
Sbjct: 627 VGYNKMLESVKFRNDPDRKHLSSFAYSRLVPALMEGHNIVEFERFVKKL 675