Miyakogusa Predicted Gene

Lj2g3v0621090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0621090.1 Non Chatacterized Hit- tr|I1GTG3|I1GTG3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,29.93,8e-19,DUF761,Protein of unknown function DUF761, plant;
DUF4408,Domain of unknown function DUF4408; coiled,CUFF.34842.1
         (301 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54300.1 | Symbols:  | Protein of unknown function (DUF761) |...    80   2e-15
AT1G61260.1 | Symbols:  | Protein of unknown function (DUF761) |...    76   2e-14
AT1G11220.1 | Symbols:  | Protein of unknown function (DUF761) |...    51   1e-06

>AT5G54300.1 | Symbols:  | Protein of unknown function (DUF761) |
           chr5:22054270-22055342 REVERSE LENGTH=326
          Length = 326

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 25/124 (20%)

Query: 184 DTLEATWRAIMEGQGKTMKPQLKKSDTWTARI-VKAEPFXXXXXXXXXXXEDPVAWAQKE 242
           DTLE TW+ I EG+   +   L KSDTW  R  V++ P                   +++
Sbjct: 217 DTLETTWKKITEGRSTPLTKHLTKSDTWQERAHVQSSP-----------------ENKEK 259

Query: 243 LTKSDTFND-------RASLRREKSMSPEELALRSEAFIKNFNNQMKLQRLESYQRFKEM 295
           +TKS+   D       +  L+RE S   EEL  R EAFIK FN +M+LQRLES  ++ EM
Sbjct: 260 MTKSENLKDINTPTEEKTVLKREPSPGQEELNRRVEAFIKKFNEEMRLQRLESLAKYNEM 319

Query: 296 VSRG 299
           V+ G
Sbjct: 320 VNGG 323


>AT1G61260.1 | Symbols:  | Protein of unknown function (DUF761) |
           chr1:22593756-22594986 REVERSE LENGTH=344
          Length = 344

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 26/127 (20%)

Query: 183 DDTLEATWRAIMEGQGKTMKPQL-KKSDTWTARIVKAEPFXXXXXXXXXXXEDPVAWAQK 241
           ++TLE TW+ I EG+   +  QL ++SDT          F             PV     
Sbjct: 233 NETLENTWKMITEGKSTPLTRQLYRRSDT----------FGRGDSGGVDGEVKPV----- 277

Query: 242 ELTKSDTFNDR---------ASLRREKSMSPEELALRSEAFIKNFNNQMKLQRLESYQRF 292
              KSDTF DR         A +R+E S+S EEL  R EAFIK FN +MKLQR+ES +++
Sbjct: 278 -YKKSDTFRDRTNYYQLAETAKVRKEPSLSQEELNRRVEAFIKKFNEEMKLQRMESLRQY 336

Query: 293 KEMVSRG 299
           KE+ SRG
Sbjct: 337 KEITSRG 343



 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 22 SKLVIMSMGIASILVLLKVTIIPCTFDLVLSTLPRLWVSARSWLTLPFLYVIVNFIILTI 81
          +K V++S G+A++ +LLK+++ P   D  +S  P LW S  SWL  P+LYV+ N II+TI
Sbjct: 8  TKAVLISSGVATVALLLKLSV-PVAVDFSVSRAPILWSSLLSWLKPPYLYVVTNGIIITI 66

Query: 82 AASSNFF 88
           ASS ++
Sbjct: 67 VASSKYY 73


>AT1G11220.1 | Symbols:  | Protein of unknown function (DUF761) |
          chr1:3760022-3761165 REVERSE LENGTH=310
          Length = 310

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 23 KLVIMSMGIASILVLLKVTIIPCTFDLVLSTLPRLWVSARSWLTLPFLYVIVNFIILTIA 82
          K  +++ GI ++ + LK ++ P   D  +S  P  W S  SWL  P+L+V +N II  I 
Sbjct: 9  KAALITAGIVAVSLFLKSSV-PIAVDFSVSRFPIFWSSFLSWLKPPYLFVAINVIITIIM 67

Query: 83 ASSNFF 88
          ASS F+
Sbjct: 68 ASSKFY 73