Miyakogusa Predicted Gene
- Lj2g3v0609810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0609810.1 Non Chatacterized Hit- tr|A5BC54|A5BC54_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.73,0.00002,RING/U-box,NULL; ZF_RING_2,Zinc finger, RING-type;
no description,Zinc finger, RING/FYVE/PHD-type; S,CUFF.34826.1
(350 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 240 9e-64
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 149 2e-36
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 149 2e-36
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 149 2e-36
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 142 3e-34
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 142 4e-34
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 142 4e-34
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 142 4e-34
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 140 9e-34
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 137 1e-32
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 137 1e-32
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 137 1e-32
AT5G01980.1 | Symbols: | RING/U-box superfamily protein | chr5:... 133 2e-31
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 128 6e-30
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 122 3e-28
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 122 3e-28
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 120 2e-27
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 114 9e-26
AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A | chr2:1656750... 112 4e-25
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 111 7e-25
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 108 7e-24
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 106 2e-23
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 104 7e-23
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 97 1e-20
AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:... 97 1e-20
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 87 2e-17
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 85 8e-17
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 82 5e-16
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 81 1e-15
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 80 2e-15
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 76 3e-14
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 70 3e-12
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 67 1e-11
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 67 2e-11
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 64 2e-10
AT2G29840.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 4e-10
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 9e-10
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 60 2e-09
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 59 3e-09
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 4e-09
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 59 4e-09
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 4e-09
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 5e-09
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 5e-09
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 6e-09
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 9e-09
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 57 1e-08
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 57 1e-08
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 2e-08
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 57 2e-08
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 2e-08
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 56 4e-08
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 56 4e-08
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 56 4e-08
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 5e-08
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 5e-08
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 56 5e-08
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 55 5e-08
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 55 5e-08
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 55 5e-08
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 6e-08
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 55 6e-08
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 6e-08
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 6e-08
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 7e-08
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 55 8e-08
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 1e-07
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 54 1e-07
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 54 1e-07
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 54 1e-07
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 54 1e-07
AT3G14970.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 2e-07
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 2e-07
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 2e-07
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 2e-07
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 53 3e-07
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 3e-07
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 3e-07
AT5G53910.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 4e-07
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 4e-07
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 53 4e-07
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 4e-07
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 52 4e-07
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 52 4e-07
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 6e-07
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 8e-07
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 8e-07
AT4G12190.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 8e-07
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 8e-07
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 8e-07
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 8e-07
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 9e-07
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 51 9e-07
AT3G16090.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 1e-06
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT1G18780.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT4G17245.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 2e-06
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 2e-06
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 3e-06
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT3G13228.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 3e-06
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 50 3e-06
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 3e-06
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 49 4e-06
AT5G22000.3 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-... 49 4e-06
AT5G22000.1 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-... 49 4e-06
AT5G22000.2 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-... 49 4e-06
AT1G21960.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 4e-06
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 4e-06
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 49 4e-06
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 4e-06
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 49 5e-06
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 5e-06
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 5e-06
AT3G15740.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 6e-06
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 49 6e-06
AT5G41440.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 6e-06
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 49 6e-06
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 6e-06
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 49 8e-06
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 8e-06
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 8e-06
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 1e-05
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 240 bits (613), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 173/324 (53%), Gaps = 48/324 (14%)
Query: 3 SAGAGDRAVTSGEP---RRYFCHQCDRTVPIS-PSSGDLICPNCNGGFLEELETXXXXXX 58
S+G + P + +FC+QC++TV IS SS D CP CN GFLEE E
Sbjct: 2 SSGVNSTGSAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYE------- 54
Query: 59 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPFDDLSAL-FGTRSSPPFGAD-------- 109
PF L L FG+ ++ P G D
Sbjct: 55 --------DPNPNQSLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPS 106
Query: 110 ------------TNDAFNPFAFLQNYVQTLAAGGANVQFVIENSGDPTGAFRIPSNVNHG 157
+DAF+PF FLQN++QTL + G + +FVIEN G R+P N G
Sbjct: 107 MQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGN-RMPGNF--G 163
Query: 158 DYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIF 217
DYFFGPGLE+LIQQLAENDPNR GTPPASKSA++ LP V VT+++L S+ QCAVC D F
Sbjct: 164 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEF 223
Query: 218 GLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDPDYEQRAXXXXXXXXXXXX 277
G KQMPCKH++H DC+LPWLE+HNSCPVCR ELPTDDPDYE R+
Sbjct: 224 EDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRS-----QGSQGSG 278
Query: 278 XXXXXXXXXXXXXXXVSLPWPFRQ 301
+ LPWPFR+
Sbjct: 279 DGQGSVEGQQTPRFSIQLPWPFRR 302
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 118/240 (49%), Gaps = 19/240 (7%)
Query: 19 YFCHQCDRTVPISPSSGDLICPNCNGGFLEELETXXXXXXXXXXXXXXXXXXXXXXXXXX 78
++CH+C R V + + D +C C GGF+EE++
Sbjct: 8 HWCHRCQRAVWLR--ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMR 65
Query: 79 XXXXXXXXXXQPFD-DLSALFGTRSSPPFGADTNDAFNPFAFLQNYVQTLAAGGAN--VQ 135
+ +D ++S G+ S F P AGG N V+
Sbjct: 66 SRLAE-----RSYDREISGRLGSAGSESF-----SNLAPLLIFGGQAPFRLAGGDNSSVE 115
Query: 136 FVIENSGDPTGAFRIPSNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPD 195
+ + G I N GDYFFGPGLEELI+QL+ + RG PPA KS+++ LP
Sbjct: 116 AFVNGAAPGIG---IARGTNAGDYFFGPGLEELIEQLSSGT-HHRGPPPAPKSSIDALPT 171
Query: 196 VSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELP 255
+ +T++ L S + C VCKD F L AKQMPC HIYH+DCI+PWL HNSCPVCR ELP
Sbjct: 172 IKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 118/240 (49%), Gaps = 19/240 (7%)
Query: 19 YFCHQCDRTVPISPSSGDLICPNCNGGFLEELETXXXXXXXXXXXXXXXXXXXXXXXXXX 78
++CH+C R V + + D +C C GGF+EE++
Sbjct: 8 HWCHRCQRAVWLR--ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMR 65
Query: 79 XXXXXXXXXXQPFD-DLSALFGTRSSPPFGADTNDAFNPFAFLQNYVQTLAAGGAN--VQ 135
+ +D ++S G+ S F P AGG N V+
Sbjct: 66 SRLAE-----RSYDREISGRLGSAGSESF-----SNLAPLLIFGGQAPFRLAGGDNSSVE 115
Query: 136 FVIENSGDPTGAFRIPSNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPD 195
+ + G I N GDYFFGPGLEELI+QL+ + RG PPA KS+++ LP
Sbjct: 116 AFVNGAAPGIG---IARGTNAGDYFFGPGLEELIEQLSSGT-HHRGPPPAPKSSIDALPT 171
Query: 196 VSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELP 255
+ +T++ L S + C VCKD F L AKQMPC HIYH+DCI+PWL HNSCPVCR ELP
Sbjct: 172 IKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 118/240 (49%), Gaps = 19/240 (7%)
Query: 19 YFCHQCDRTVPISPSSGDLICPNCNGGFLEELETXXXXXXXXXXXXXXXXXXXXXXXXXX 78
++CH+C R V + + D +C C GGF+EE++
Sbjct: 8 HWCHRCQRAVWLR--ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMR 65
Query: 79 XXXXXXXXXXQPFD-DLSALFGTRSSPPFGADTNDAFNPFAFLQNYVQTLAAGGAN--VQ 135
+ +D ++S G+ S F P AGG N V+
Sbjct: 66 SRLAE-----RSYDREISGRLGSAGSESF-----SNLAPLLIFGGQAPFRLAGGDNSSVE 115
Query: 136 FVIENSGDPTGAFRIPSNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPD 195
+ + G I N GDYFFGPGLEELI+QL+ + RG PPA KS+++ LP
Sbjct: 116 AFVNGAAPGIG---IARGTNAGDYFFGPGLEELIEQLSSGT-HHRGPPPAPKSSIDALPT 171
Query: 196 VSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELP 255
+ +T++ L S + C VCKD F L AKQMPC HIYH+DCI+PWL HNSCPVCR ELP
Sbjct: 172 IKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 87/138 (63%), Gaps = 18/138 (13%)
Query: 125 QTLAAGGANVQFVIENSGD----PTGAFRIPSNVNHGDYFFGPGLEELIQQLAENDPNRR 180
+ + +N ++NS D P G+ GDYF GPG E L+Q+LAENDPNR
Sbjct: 148 RVILINTSNQTITVQNSADMDSVPAGSL--------GDYFIGPGFEMLLQRLAENDPNRY 199
Query: 181 GTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPW 240
GTPPA K AVE L V + E L QC+VC D F +G AK MPC H +H+DC+LPW
Sbjct: 200 GTPPAKKEAVEALATVKIEETL------QCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPW 253
Query: 241 LEMHNSCPVCRHELPTDD 258
LE+H+SCPVCR++LP D+
Sbjct: 254 LELHSSCPVCRYQLPADE 271
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 110/238 (46%), Gaps = 9/238 (3%)
Query: 19 YFCHQCDRTVPISPSSGDLICPNCNGGFLEELETXXXXXXXXXXXXXXXXXXXXXXXXXX 78
++CH+C R V + + +C C GGF+EEL+
Sbjct: 8 HWCHRCQRAVRLH--GQEPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTFDLMD 65
Query: 79 XXXXXXXXXXQPFDDLSALFGTRSSPPFGADTNDAFNPFAFLQNYVQTLAAGGANVQFVI 138
+ G S G + P V G V+ +
Sbjct: 66 AFSVFMRNRLAERSHDREIRGRTISS--GPENFPGLAPLLIFGGQVPYRLTGDNAVEALF 123
Query: 139 ENSGDPTGAFRIPSNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSV 198
N G P + N GDYFFGPGLEEL +QL+ RRG PPA +SA++ LP + +
Sbjct: 124 -NGGSPGIGI---TRGNTGDYFFGPGLEELFEQLSAGT-TRRGPPPAPRSAIDALPTIKI 178
Query: 199 TEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPT 256
+ L S + C VCKD F LG AKQMPC HIYH+DCI+PWL HNSCPVCR ELP+
Sbjct: 179 AQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 110/238 (46%), Gaps = 9/238 (3%)
Query: 19 YFCHQCDRTVPISPSSGDLICPNCNGGFLEELETXXXXXXXXXXXXXXXXXXXXXXXXXX 78
++CH+C R V + + +C C GGF+EEL+
Sbjct: 8 HWCHRCQRAVRLH--GQEPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTFDLMD 65
Query: 79 XXXXXXXXXXQPFDDLSALFGTRSSPPFGADTNDAFNPFAFLQNYVQTLAAGGANVQFVI 138
+ G S G + P V G V+ +
Sbjct: 66 AFSVFMRNRLAERSHDREIRGRTISS--GPENFPGLAPLLIFGGQVPYRLTGDNAVEALF 123
Query: 139 ENSGDPTGAFRIPSNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSV 198
N G P + N GDYFFGPGLEEL +QL+ RRG PPA +SA++ LP + +
Sbjct: 124 -NGGSPGIGI---TRGNTGDYFFGPGLEELFEQLSAGT-TRRGPPPAPRSAIDALPTIKI 178
Query: 199 TEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPT 256
+ L S + C VCKD F LG AKQMPC HIYH+DCI+PWL HNSCPVCR ELP+
Sbjct: 179 AQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 110/238 (46%), Gaps = 9/238 (3%)
Query: 19 YFCHQCDRTVPISPSSGDLICPNCNGGFLEELETXXXXXXXXXXXXXXXXXXXXXXXXXX 78
++CH+C R V + + +C C GGF+EEL+
Sbjct: 8 HWCHRCQRAVRLH--GQEPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTFDLMD 65
Query: 79 XXXXXXXXXXQPFDDLSALFGTRSSPPFGADTNDAFNPFAFLQNYVQTLAAGGANVQFVI 138
+ G S G + P V G V+ +
Sbjct: 66 AFSVFMRNRLAERSHDREIRGRTISS--GPENFPGLAPLLIFGGQVPYRLTGDNAVEALF 123
Query: 139 ENSGDPTGAFRIPSNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSV 198
N G P + N GDYFFGPGLEEL +QL+ RRG PPA +SA++ LP + +
Sbjct: 124 -NGGSPGIGI---TRGNTGDYFFGPGLEELFEQLSAGT-TRRGPPPAPRSAIDALPTIKI 178
Query: 199 TEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPT 256
+ L S + C VCKD F LG AKQMPC HIYH+DCI+PWL HNSCPVCR ELP+
Sbjct: 179 AQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 8/112 (7%)
Query: 151 PSNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQC 210
PS + GDYF GPGL+ L+Q LAENDPNR+GTPPA K AVE LP V + E L QC
Sbjct: 206 PSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QC 259
Query: 211 AVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPT--DDPD 260
+VC D F G AK+MPCKH +H CI+PWLE+H+SCPVCR ELP+ DD D
Sbjct: 260 SVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDD 311
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 78/105 (74%), Gaps = 6/105 (5%)
Query: 157 GDYFFGPGLEELIQQLAENDPNRR-GTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKD 215
GDYF GPG E L+Q+LAEND N R GTPPA+K AVE L V + + LL QC+VC D
Sbjct: 176 GDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLL-----QCSVCLD 230
Query: 216 IFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDPD 260
F +G AK+MPCKH +H+DC+LPWLE+H+SCPVCR+ LPT D D
Sbjct: 231 DFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDD 275
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 78/105 (74%), Gaps = 6/105 (5%)
Query: 157 GDYFFGPGLEELIQQLAENDPNRR-GTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKD 215
GDYF GPG E L+Q+LAEND N R GTPPA+K AVE L V + + LL QC+VC D
Sbjct: 176 GDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLL-----QCSVCLD 230
Query: 216 IFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDPD 260
F +G AK+MPCKH +H+DC+LPWLE+H+SCPVCR+ LPT D D
Sbjct: 231 DFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDD 275
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 78/105 (74%), Gaps = 6/105 (5%)
Query: 157 GDYFFGPGLEELIQQLAENDPNRR-GTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKD 215
GDYF GPG E L+Q+LAEND N R GTPPA+K AVE L V + + LL QC+VC D
Sbjct: 176 GDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLL-----QCSVCLD 230
Query: 216 IFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDPD 260
F +G AK+MPCKH +H+DC+LPWLE+H+SCPVCR+ LPT D D
Sbjct: 231 DFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDD 275
>AT5G01980.1 | Symbols: | RING/U-box superfamily protein |
chr5:375542-377023 FORWARD LENGTH=493
Length = 493
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 151 PSNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQC 210
P N GDY G +EL++QLAE+D +RRG PPAS S V LP V + EE + C
Sbjct: 292 PYAANVGDYLDERGFDELLEQLAESDNSRRGAPPASVSCVRNLPRVIIAEEHVMK-GLVC 350
Query: 211 AVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDPDYEQ 263
A+CK++F L + Q+PC H+YHA CI+PWL NSCP+CR+ELPTDD DYE+
Sbjct: 351 AICKELFSLRNETTQLPCLHLYHAHCIVPWLSARNSCPLCRYELPTDDKDYEE 403
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 73/97 (75%)
Query: 168 LIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP 227
+I Q+ +N+ +GTPPASKS V+GLPDV +T E L+S S CA+CKD + K++P
Sbjct: 249 IIGQMFDNETGIKGTPPASKSVVDGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLP 308
Query: 228 CKHIYHADCILPWLEMHNSCPVCRHELPTDDPDYEQR 264
CKH YH +CI+PWL + N+CPVCRHELPTDD +YE++
Sbjct: 309 CKHYYHGECIIPWLGIRNTCPVCRHELPTDDLEYERK 345
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 70/102 (68%), Gaps = 6/102 (5%)
Query: 157 GDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDI 216
GDYF G L+ L++ LA+ND R G+ PA K V+ LP V ++E L QC++C D
Sbjct: 194 GDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISESL------QCSICLDD 247
Query: 217 FGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDD 258
F G AK+MPCKH +H CI+PWLE+H+SCPVCR+ELP DD
Sbjct: 248 FDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDD 289
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 70/102 (68%), Gaps = 6/102 (5%)
Query: 157 GDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDI 216
GDYF G L+ L++ LA+ND R G+ PA K V+ LP V ++E L QC++C D
Sbjct: 194 GDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISESL------QCSICLDD 247
Query: 217 FGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDD 258
F G AK+MPCKH +H CI+PWLE+H+SCPVCR+ELP DD
Sbjct: 248 FDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDD 289
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 3/115 (2%)
Query: 151 PSNVNHGDYFFGPG-LEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQ 209
P +VN DYF G LE+LI+QL ++D R G PPAS+ + LP V +T + L +D +Q
Sbjct: 166 PRHVNSHDYFTGASSLEQLIEQLTQDD--RPGPPPASEPTINSLPSVKITPQHLTNDMSQ 223
Query: 210 CAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDPDYEQR 264
C VC + F +G A ++PCKHIYH DCI+PWL ++NSCP+CR +LP + E R
Sbjct: 224 CTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDLPLVNTVAESR 278
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 78/121 (64%), Gaps = 8/121 (6%)
Query: 142 GDPTGAFRIPSNVNHGDYFFGPGLEELIQQLAE-----NDPNRRGTPPASKSAVEGLPDV 196
G +G +P +V+ + G G E L++QL++ N R G PPASKSA+E LP V
Sbjct: 145 GSGSGLRPLPDSVS--EILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRV 202
Query: 197 SVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPT 256
+++ ++ A CAVC ++F G ++MPCKHI+H DCI+PWL + NSCPVCR ELP+
Sbjct: 203 EISDCHTKAE-ANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPS 261
Query: 257 D 257
D
Sbjct: 262 D 262
>AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A |
chr2:16567506-16568711 REVERSE LENGTH=401
Length = 401
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 7/108 (6%)
Query: 158 DYFFGPGLEELIQQLAENDPNRRGT------PPASKSAVEGLPDVSVTEELLASDS-AQC 210
++ G G + L+ Q+++ + N PPASKSA+E LP + + L SDS + C
Sbjct: 142 EFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHC 201
Query: 211 AVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDD 258
AVCK+ F L +A++MPC HIYH DCILPWL + NSCPVCRHELP +D
Sbjct: 202 AVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAED 249
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 80/121 (66%), Gaps = 8/121 (6%)
Query: 142 GDPTGAFRIPSNVNHGDYFFGPGLEELIQQLAENDPN-----RRGTPPASKSAVEGLPDV 196
G +G +P +V+ + G G E L++QL++ + + R G PPASKSA+E LP V
Sbjct: 129 GSGSGLRPLPDSVS--EILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRV 186
Query: 197 SVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPT 256
+++ + S+ A CAVC +IF A++MPCKH++H DCI+PWL + NSCPVCR ELP+
Sbjct: 187 EISDCHIGSE-ANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPS 245
Query: 257 D 257
+
Sbjct: 246 E 246
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Query: 155 NHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCK 214
+H DY + L +Q A+ + + G PP SKS + LP V + E CAVCK
Sbjct: 256 DHDDYV--QDYDMLFEQFADAEVSVIGLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCK 313
Query: 215 DIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDPDYEQR 264
D +G+ A Q+PC H YH++CI+PWL++ N+CPVCR+ELPTDD +YEQR
Sbjct: 314 DEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDDAEYEQR 363
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 13/132 (9%)
Query: 146 GAFRIPSNVNHGDYFFGPGLEE-------------LIQQLAENDPNRRGTPPASKSAVEG 192
G P +++ Y + GL+E ++ Q+ +++ RG PPA+KS ++
Sbjct: 258 GIMLNPDDIDPDYYLYLSGLDEFDENHSGHYDADAILGQMFDDETGIRGNPPAAKSVIQD 317
Query: 193 LPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRH 252
LP V + E L + CAVCKD + + +++PC H YH +CI+PWL + N+CPVCR+
Sbjct: 318 LPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRY 377
Query: 253 ELPTDDPDYEQR 264
ELPTDD +YE+
Sbjct: 378 ELPTDDLEYERH 389
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 183 PPASKSAVEGLPDVSVTEELLAS--DSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPW 240
PPASK VE LP + TEELL A+C +CK+ +GD +++PCKH +H C+ PW
Sbjct: 201 PPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPW 260
Query: 241 LEMHNSCPVCRHELPTDDPDYE 262
L+ HNSCP+CRHELPTDD YE
Sbjct: 261 LDEHNSCPICRHELPTDDQKYE 282
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Query: 165 LEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAK 224
EEL +L +RRG PPAS +A+ L + + ++ L D C VC+D F +G A+
Sbjct: 78 FEELFNRLPALQ-DRRGPPPASLAAINSLQKIKIRQKHLGLD-PYCPVCQDQFEIGSDAR 135
Query: 225 QMPCKHIYHADCILPWLEMHNSCPVCRHELPTD 257
+MPCKHIYH++CILPWL N+CPVCR ELP D
Sbjct: 136 KMPCKHIYHSECILPWLVQRNTCPVCRKELPQD 168
>AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 |
chr5:25944338-25945342 REVERSE LENGTH=334
Length = 334
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 77/131 (58%), Gaps = 13/131 (9%)
Query: 143 DPTGAFRIPSNV---NHGDYFF-GPGLEELIQQLAENDPNRRG----TPPASKSAVEGLP 194
D + FR+ S+ N DY G E L+Q LAE D G PPA+KSA+E L
Sbjct: 183 DNSIEFRMESDRYAGNPADYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALE 242
Query: 195 --DVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRH 252
+VS +E + CAVCKD +G+T K++PC H YH DCI+PWL NSCPVCR
Sbjct: 243 TFEVSSSEGEMV---MVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRF 299
Query: 253 ELPTDDPDYEQ 263
+L TDD +YE+
Sbjct: 300 QLETDDAEYEE 310
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 71/119 (59%), Gaps = 16/119 (13%)
Query: 154 VNHGDYFF--GPGLEELIQQLAENDPNRRGTPPASKSA-------VEGLPDVSVTEELLA 204
VN D F P L L++ LA ++ + +S S+ ++ +P + ++ LL
Sbjct: 97 VNSDDNFLLDSPYLHRLLRHLASDNSGSSSSSSSSSSSSLLKSSDIDSIPTIQISSSLLC 156
Query: 205 S------DSAQ-CAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPT 256
S DS CAVCK+ F +G++A+++PC HIYH+DCI+PWL HNSCP+CR ELPT
Sbjct: 157 STDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFELPT 215
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 181 GTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPW 240
G PPAS+SA+E + V +T+E L + CA+CK+ F +G+ K++ C H+YH+ CI+ W
Sbjct: 110 GPPPASQSAIEAVRTVIITDEDLVKEKV-CAICKEEFEVGEEGKELKCLHLYHSSCIVSW 168
Query: 241 LEMHNSCPVCRHEL 254
L +HN+CP+CR E+
Sbjct: 169 LNIHNTCPICRFEV 182
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 181 GTPPASKSAVEGLPDVSVTEELLAS---DSAQCAVCKDIFGLGDTAKQMPCKHIYHADCI 237
G PPASKS ++ L ++ E + D+ CAVCK+ +G ++PC+H YH++CI
Sbjct: 340 GKPPASKSFIKNLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECI 399
Query: 238 LPWLEMHNSCPVCRHELPTD 257
+PWL + N+CPVCR ELP+D
Sbjct: 400 VPWLGIRNTCPVCRFELPSD 419
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 164 GLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTA 223
G+ L++ L E+ G PPASK++++ +P V + +C +C + + +T
Sbjct: 74 GMNPLLRSLLES--REEGRPPASKASIDAMPIVEID-----GCEGECVICLEEWKSEETV 126
Query: 224 KQMPCKHIYHADCILPWLEMHNSCPVCRHELPTD 257
K+MPCKH +H CI WL H SCPVCR+E+P D
Sbjct: 127 KEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 175 NDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHA 234
+D ++G PA KS VE +P V + E+ CA+C D + GD A +MPCKH +H+
Sbjct: 75 SDGGKQGRSPALKSEVENMPRVVIGEDK-EKYGGSCAICLDEWSKGDVAAEMPCKHKFHS 133
Query: 235 DCILPWLEMHNSCPVCRHELP 255
C+ WL H +CP+CR+E+P
Sbjct: 134 KCVEEWLGRHATCPMCRYEMP 154
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 210 CAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPT 256
CA+C++ F +G++A+++PC H+YH DCI+PWL HNSCP+CR ELP
Sbjct: 96 CAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVELPV 142
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 184 PASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEM 243
PA+ AV LP V++ E+ +C +C + + D ++PCKH YH +C+ WL++
Sbjct: 461 PATIRAVAMLPRVAMVEK------GECVICFEEWSKSDMETELPCKHKYHLECVEKWLKI 514
Query: 244 HNSCPVCRHEL 254
H SCP CR++L
Sbjct: 515 HTSCPQCRYKL 525
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 137 VIENSGDPTGAFRIPSNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDV 196
++E + G SN+ H D F EL+ L EN+ G AS + + LP+
Sbjct: 522 ILEELENAIGHSITSSNLLHMDRDFTEDDYELLLALDENNHRHGG---ASANRINNLPES 578
Query: 197 SVTEELLASDSAQ--CAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
+V +D+ Q C +C + +GDT + +PC H +H DCI PWL SCPVC+
Sbjct: 579 TV-----QTDNFQETCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSCPVCK 630
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 208 AQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDD 258
+C +CK+ G +MPC+H +H CILPWL N+CP CR +LPTDD
Sbjct: 212 VECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQLPTDD 262
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 188 SAVEGLPDVSVT-EELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNS 246
+A E LP V T EE++ CA+C++ + ++PC+H YH +CI WL N+
Sbjct: 74 NAGEELPVVEFTAEEMMERGLVVCAICREELAANERLSELPCRHYYHKECISNWLSNRNT 133
Query: 247 CPVCRH--ELP 255
CP+CRH ELP
Sbjct: 134 CPLCRHNVELP 144
>AT2G29840.1 | Symbols: | RING/U-box superfamily protein |
chr2:12732387-12733983 REVERSE LENGTH=293
Length = 293
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 161 FGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEEL-LASDSAQCAVCKDIFGL 219
F P E+++Q + N+ N PASK AVE L + + + ++ C++C + F
Sbjct: 195 FHPQFEQVLQ-ASFNETNTARLKPASKLAVESLNRKTYKKASDVVGENEMCSICLEEFDD 253
Query: 220 GDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDD 258
G + +PC H + +C L W E ++ CP+CR +LP +D
Sbjct: 254 GRSIVALPCGHEFDDECALKWFETNHDCPLCRFKLPCED 292
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 179 RRGTPPASKSAVEGLPDVSV-TEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADC 236
+RG P + + LP +V + +A+ + +CAVC + D A+++P CKHI+H DC
Sbjct: 79 KRGLNP---TVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDC 135
Query: 237 ILPWLEMHNSCPVCRHEL 254
+ WL ++CPVCR E+
Sbjct: 136 VDTWLTTCSTCPVCRTEV 153
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 165 LEELIQQ---LAENDPNRR--GTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGL 219
L+E+ QQ L+ P+ G+ PA V+ LP + + + + D +QC +C +
Sbjct: 441 LDEIHQQSVVLSSQQPSVSSIGSVPAPNDVVDLLP-IKLYTKSQSEDPSQCYICLVEYEE 499
Query: 220 GDTAKQMPCKHIYHADCILPWL-EMHNSCPVCRHELPTDDPDYEQ 263
D+ + +PC H +H C+ WL E+H CP+CR ++ DP EQ
Sbjct: 500 ADSIRTLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICRHDPSSEQ 544
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 206 DSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
D +C+VC + F +T PCKH++H +CI+PWL+ CPVCR
Sbjct: 168 DDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCR 213
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 186 SKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMH 244
SK E LP V E DS QC+VC + D +Q+P CKH +H DCI WL H
Sbjct: 77 SKELREMLPIVVFKESFTVMDS-QCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSH 135
Query: 245 NSCPVCRHEL 254
+CP+CR L
Sbjct: 136 TTCPLCRLAL 145
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 202 LLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
L D +C++C++ + GD +PC+H+YH C+ WL M N CP+C+
Sbjct: 467 LYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 202 LLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
L D +C++C++ + GD +PC+H+YH C+ WL M N CP+C+
Sbjct: 467 LYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 39/58 (67%)
Query: 197 SVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHEL 254
S + L++ + A C +C +G + +++PC H++H DC+ WL+++ +CP+C++E+
Sbjct: 342 SQKKRLISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 399
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 206 DSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
D +C+VC + F +T PCKH++H +CI+PWL+ CPVCR
Sbjct: 140 DDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCR 185
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 203 LASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHEL 254
+D +QC++C + GD +PCKHIYH DCI WL+ + C +C+ E+
Sbjct: 227 FVADDSQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEV 278
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 33/170 (19%)
Query: 112 DAFNPFAFLQNYVQTLAAGGANVQ--------FVIENSGDPTGAFRIPSNVNHGDYFFGP 163
+ FNP ++ +V + AN Q ++ T F + + +F
Sbjct: 6 ECFNPHRWIILHVAIIIQSKANAQSFSPSPPDLQTGHTPSKTTVFAVLVTL----FFLTG 61
Query: 164 GLEELIQQLAENDPN---------------RRGTPPASKSAVEGLPDV---SVTEELLAS 205
L I+ A ++P+ RRG + VE P SV E + S
Sbjct: 62 LLSVYIRHCARSNPDSSTRYFRNRANDGSSRRG--GLDNAVVESFPVFAYSSVKESKIGS 119
Query: 206 DSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHEL 254
+CA+C + +T + +P C H++H DCI WL H +CPVCR L
Sbjct: 120 KDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 169
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 QCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHEL 254
+C +C+ + +G+ +PCKH+YH++CI WL ++ CPVC E+
Sbjct: 196 RCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 QCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHEL 254
+C +C+ + +G+ +PCKH+YH++CI WL ++ CPVC E+
Sbjct: 196 RCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 186 SKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMH 244
SK E LP V E + DS QC+VC + + +QMP C H +H +CI WL H
Sbjct: 88 SKDIREMLPVVIYKESFIVKDS-QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSH 146
Query: 245 NSCPVCRHEL 254
+CP+CR L
Sbjct: 147 TTCPLCRLSL 156
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 206 DSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
D +C++C++ + GD +PC+H YH C WL M N CP+C+
Sbjct: 464 DDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 206 DSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
D +C++C++ + GD +PC+H YH C WL M N CP+C+
Sbjct: 464 DDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 210 CAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHEL 254
CA+C D F G+T +PC H +H+ C+LPWL+ + CP CR ++
Sbjct: 150 CAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 165 LEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAK 224
+EE ++ E + N PA+K V L + S + +C +C + F G
Sbjct: 133 IEEAVRASLE-ETNNISLRPANKLVVNSLARKIYKKT--TSSTERCTICLEEFNDGTKVM 189
Query: 225 QMPCKHIYHADCILPWLEMHNSCPVCRHELPTDD 258
+PC H + +C+L W E ++ CP+CR +LP +D
Sbjct: 190 TLPCGHEFDDECVLTWFETNHDCPLCRFKLPCED 223
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 165 LEELIQQ---LAENDPNRR--GTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGL 219
L+E+ QQ L+ P+ G+ PA V+ LP + + + + D +QC +C +
Sbjct: 441 LDEIHQQSVVLSSQQPSVSSIGSVPAPNDVVDLLP-IKLYTKSQSEDPSQCYICLVEYEE 499
Query: 220 GDTAKQMPCKHIYHADCILPWL-EMHNS-CPVCRHELPTDDPDYEQ 263
D+ + +PC H +H C+ WL E+H+ CP+CR ++ DP EQ
Sbjct: 500 ADSIRTLPCHHEFHKTCVDKWLKEIHSRVCPLCRGDICRHDPSSEQ 545
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 191 EGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPV 249
+ L V EEL DS C VC F L + +MP CKHI+H DCI WL HN+CP+
Sbjct: 87 DKLHVVLFNEELGTRDSL-CCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPL 145
Query: 250 CR 251
CR
Sbjct: 146 CR 147
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 181 GTPPASKSAVEGLPDVSVTEE--LLAS-DSAQCAVCKDIFGLGDTAKQMP-CKHIYHADC 236
G+ + V+ +P + +T + L AS + C+VC F LG+T + +P C H++H C
Sbjct: 159 GSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPC 218
Query: 237 ILPWLEMHNSCPVCRHEL 254
I WL H SCP+CR +L
Sbjct: 219 IDNWLFRHGSCPMCRRDL 236
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%)
Query: 192 GLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
GL S TE +L S+ A+C++C + G +++PC+H +H+ C+ WL ++ +CP+C+
Sbjct: 305 GLDTESQTERMLLSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCK 364
Query: 252 HEL 254
+
Sbjct: 365 FNI 367
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 187 KSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHN 245
+S +E LP D +CAVC F + + +P CKH +H +C+ WL+ H+
Sbjct: 69 RSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHS 128
Query: 246 SCPVCRHELPTDD 258
+CP+CR+ + +D
Sbjct: 129 TCPLCRYRVDPED 141
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 193 LPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCR 251
+P V +T+ + + C+VC F +G+T + +P C H++H CI WL H SCP+CR
Sbjct: 185 IPKVRITDT--SPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 242
Query: 252 HEL 254
L
Sbjct: 243 RHL 245
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 181 GTPPASKSAVEGLPDVSVT---EELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADC 236
G+ + VE +P +++T + ++ C+VC F LG+T + +P C H++H C
Sbjct: 164 GSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPC 223
Query: 237 ILPWLEMHNSCPVCRHEL 254
I WL H SCP+CR ++
Sbjct: 224 IDNWLLRHGSCPMCRRDI 241
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 193 LPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCR 251
+P V +T+ + + C+VC F +G+T + +P C H++H CI WL H SCP+CR
Sbjct: 161 IPKVRITDT--SPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 218
Query: 252 HEL 254
L
Sbjct: 219 RHL 221
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 190 VEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWL-EMHNSCP 248
V LP + T+ CA+C + + G++ + +PC+H +H +CI WL + SCP
Sbjct: 212 VHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCP 271
Query: 249 VCRHELPTDDPDYE 262
VC+H++ T+ E
Sbjct: 272 VCKHDIRTETMSSE 285
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 208 AQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHELPTDDPDYE 262
+CAVC + D A+ +P CKH++H C+ WL ++CPVCR E P E
Sbjct: 98 TECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLE 153
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 31/46 (67%)
Query: 206 DSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
+ A+C++C++ + +GD ++ C+H YH C+ WL + + CP+C+
Sbjct: 444 EDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICK 489
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 55.1 bits (131), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 184 PASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEM 243
PASK V+ L + + +S C +C + F G +PC H + +C+L W E
Sbjct: 34 PASKLVVKSLAR-KIYKMTTSSTGEMCIICLEEFSEGRRVVTLPCGHDFDDECVLKWFET 92
Query: 244 HNSCPVCRHELP 255
++SCP+CR +LP
Sbjct: 93 NHSCPLCRFKLP 104
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 185 ASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMH 244
++ S+ E + D + + D C+VC + +G+ + +PC H +HA CI PWL
Sbjct: 186 STSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQ 245
Query: 245 NSCPVCR 251
+CPVC+
Sbjct: 246 GTCPVCK 252
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 189 AVEGLPDVSVTE--ELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHN 245
+E P + + E L D A CA+C + +T + +P C+H +HADCI WL+++
Sbjct: 307 TIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNG 366
Query: 246 SCPVCRH 252
+CPVCR+
Sbjct: 367 TCPVCRN 373
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 190 VEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWL-EMHNSCP 248
V LP + T+ CA+C + + G++ + +PC+H +H +CI WL + SCP
Sbjct: 212 VHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCP 271
Query: 249 VCRHELPTDDPDYE 262
VC+H++ T+ E
Sbjct: 272 VCKHDIRTETMSSE 285
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 180 RGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCIL 238
RG P + ++ LP + ++E D +CAVC F +T + +P C+H +H DCI
Sbjct: 93 RGLDP---NVIKSLPVFTFSDET-HKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCID 148
Query: 239 PWLEMHNSCPVCR 251
W H++CP+CR
Sbjct: 149 MWFHSHSTCPLCR 161
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 188 SAVEGLPDV---SVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEM 243
S VE P V + L +CA+C + F +T + +P C H++H CI WLE
Sbjct: 103 SVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEA 162
Query: 244 HNSCPVCRHEL 254
H +CPVCR L
Sbjct: 163 HVTCPVCRANL 173
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 187 KSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHN 245
K A+E LP + +C+VC F + + +P C+H +H CI WLE H
Sbjct: 101 KKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHA 160
Query: 246 SCPVCRHELPTDD 258
+CP+CR+ + +D
Sbjct: 161 TCPLCRNRVNIED 173
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 174 ENDPNRRGTPPASKSAVEGLPDVSVTEEL-LASDSAQCAVCKDIFGLGDTAKQMP-CKHI 231
+N P R + A++ VS + EL L +CA+C F + K +P C H
Sbjct: 94 DNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHG 153
Query: 232 YHADCILPWLEMHNSCPVCRHEL 254
+H CI WL H+SCP CRH L
Sbjct: 154 FHVRCIDKWLSSHSSCPTCRHCL 176
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 198 VTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHELPT 256
V + + + +CA+C + F +T + +P C H++H CI WL+ H +CPVCR L
Sbjct: 112 VKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAE 171
Query: 257 DDPDYE 262
P+ E
Sbjct: 172 QTPEPE 177
>AT3G14970.1 | Symbols: | RING/U-box superfamily protein |
chr3:5039071-5039733 REVERSE LENGTH=220
Length = 220
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Query: 152 SNVNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCA 211
SNV D + ++ R PAS AVE + V E + + C
Sbjct: 119 SNVKEVDVVINVIVWRFPDDDDDDVDVRLAVAPASNEAVEQHLETVVVE-----NESWCV 173
Query: 212 VCKDIF--GLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPT 256
+C D GL A +MPC H++H C WL CPVCR PT
Sbjct: 174 ICMDKIRIGLDVAAGRMPCSHVFHRTCGEDWLRCSGICPVCRAMFPT 220
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 186 SKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMH 244
SK E LP V E +D+ QC+VC + + +QMP C H +H +CI WL H
Sbjct: 74 SKDIREMLPIVIYKESFTVNDT-QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSH 132
Query: 245 NSCPVCRHEL 254
+CP+CR L
Sbjct: 133 TTCPLCRLSL 142
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 199 TEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
T E L+S+ A C +C++ +AK++ C H++H C+ WLE N+CP CR
Sbjct: 102 TPEELSSNDATCIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCR 151
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 198 VTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHEL 254
V E + +CAVC F +T + MP C H++HADC+ WL H++CP+CR +L
Sbjct: 84 VKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRVDL 141
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 169 IQQLAENDPNRRGTPPASKS----AVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAK 224
+Q+ D TPP + + P + + +CA+C F DT +
Sbjct: 58 LQRTPYGDLIHVATPPENTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVR 117
Query: 225 QMP-CKHIYHADCILPWLEMHNSCPVCRHEL 254
+ C+H +H++CI W E+H +CPVCR EL
Sbjct: 118 LITVCRHPFHSNCIDLWFELHKTCPVCRCEL 148
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 188 SAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNS 246
S ++ LP + + + A + +C+VC F ++ + MP CKH +H DCI W H+S
Sbjct: 55 SIIKSLPIFTFSA-VTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSS 113
Query: 247 CPVCR 251
CP+CR
Sbjct: 114 CPLCR 118
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 206 DSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHELP 255
+S +CA+C + + + + P C+HIYHA CI WL+ H +CP CR +LP
Sbjct: 126 ESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDLP 176
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 199 TEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
T E L+S+ A C +C++ +AK++ C H++H C+ WLE N+CP CR
Sbjct: 210 TPEELSSNDATCIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCR 259
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 210 CAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHE 253
C +C + +T K +P C+H +H +CI PWL++HNSCPVCR+
Sbjct: 264 CPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCRNS 308
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 189 AVEGLPDVSVTEE---LLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMH 244
A+E P +E + +CAVC F +T + MP C H++HADC+ WL H
Sbjct: 111 AIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEH 170
Query: 245 NSCPVCRHEL 254
++CP+CR +L
Sbjct: 171 STCPLCRADL 180
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 199 TEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
T E L+S+ A C +C++ +AK++ C H++H C+ WLE N+CP CR
Sbjct: 281 TPEELSSNDATCIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCR 330
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 199 TEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDD 258
TE L ++ A C +C + G +PC H +H+ CI+ WL+M +CP+C++ +
Sbjct: 296 TERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKGT 355
Query: 259 PD 260
D
Sbjct: 356 TD 357
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 187 KSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHN 245
K+A+E LP + + C+VC F + + +P C+H +H CI WLE H
Sbjct: 100 KTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHA 159
Query: 246 SCPVCRHELPTDD 258
+CP+CR + ++
Sbjct: 160 TCPLCRDRVSMEE 172
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 36/61 (59%)
Query: 200 EELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDP 259
E ++ + A C +C + + +++PC H +H +C+ WL+++ SCP+C+ E+ +
Sbjct: 353 ERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNS 412
Query: 260 D 260
D
Sbjct: 413 D 413
>AT5G53910.1 | Symbols: | RING/U-box superfamily protein |
chr5:21890643-21891335 FORWARD LENGTH=230
Length = 230
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 200 EELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDP 259
E +S +CA+C F G + C H + CI+ W ++ +CP+CR ELP +D
Sbjct: 162 RETYSSGEYKCAICFQEFKTGREVATLLCGHEFDNKCIMEWFKVRYNCPLCRFELPREDD 221
Query: 260 DYEQRA 265
QR
Sbjct: 222 HIPQRT 227
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 160 FFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPD---VSVTEELLASDSAQCAVCKDI 216
+F + Q + + +G K ++ +P V EE S S CA+C D
Sbjct: 65 YFSVRRHRIRQHVRDLHHGGQGHSRMPKDLLQSMPTEVYTGVLEE--GSTSVTCAICIDD 122
Query: 217 FGLGDTAKQMPCKHIYHADCILPWLEMHNS-CPVCR 251
+ +G+ + +PCKH YHA CI WL S CPVC+
Sbjct: 123 YRVGEILRILPCKHKYHAVCIDSWLGRCRSFCPVCK 158
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 180 RGTPPASKSAV-EGLPDV---SVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHA 234
R +P +S+V + LP SVT + +S CAVC F D + +P C H +HA
Sbjct: 83 RVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHA 142
Query: 235 DCILPWLEMHNSCPVCRHELPTDDPDYEQ 263
DCI WL + +CP+CR L + D +
Sbjct: 143 DCIDIWLVSNQTCPLCRSPLFASESDLMK 171
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 206 DSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHEL 254
D +CAVC GD A+ +P C H +H DCI W + H++CP+CR+ +
Sbjct: 116 DGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 198 VTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNS-CPVCRH 252
V EE +S S CA+C D + +G+ + +PCKH YHA CI WL S CPVC+
Sbjct: 223 VLEE--SSTSVTCAICIDDYCVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCKQ 276
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 133 NVQFVIENSGDPTGAFRIPSN-VNHGDYFF---GPGLEELIQQLAENDPNRRGTPP---A 185
V + G P F I + + D+ F G + + Q A P TP A
Sbjct: 153 QVHLLRAQQGIPISEFGILVDMIRVPDWAFEAAGQEMRGISQDAATYHPGLYLTPAQTEA 212
Query: 186 SKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHN 245
++ ++ LP + + + D +C +C + F +G + +PC H +H +CI WL ++
Sbjct: 213 VEALIQELPKFRL--KAVPDDCGECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNV 270
Query: 246 SCPVCR 251
CP CR
Sbjct: 271 KCPRCR 276
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 210 CAVCKDIFGLGDT-AKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTD 257
CA+C + + G + ++PC H +H DCI WL++++ CP+CR +P D
Sbjct: 183 CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIPKD 231
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 203 LASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHELP 255
+ +CA+C + F +T + MP C H +HA CI WL ++CPVCR LP
Sbjct: 121 IGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLP 174
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 187 KSAVEGLPDVSVTE--ELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEM 243
+S +E V + E L ++ C +C + +T + MP C H +H CI WL++
Sbjct: 228 QSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKI 287
Query: 244 HNSCPVCRH 252
H+SCPVCR+
Sbjct: 288 HSSCPVCRN 296
>AT4G12190.1 | Symbols: | RING/U-box superfamily protein |
chr4:7278545-7278760 REVERSE LENGTH=71
Length = 71
Score = 51.6 bits (122), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 199 TEEL--LASDSAQCAVCKDIFGLGDTAK---QMPCKHIYHADCILPWLEMHNSCPVCRHE 253
TEEL L ++ C++C + G + +M C H++H C+L WL+ N+CP+CR E
Sbjct: 9 TEELKSLKMETEPCSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCRTE 68
Query: 254 L 254
L
Sbjct: 69 L 69
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 187 KSAVEGLPDVSVTEEL---LASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLE 242
+S +E V + E S+ C +C + +T + +P C+H +H +CI WL+
Sbjct: 301 ESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLK 360
Query: 243 MHNSCPVCR 251
+H+SCPVCR
Sbjct: 361 LHSSCPVCR 369
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 186 SKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHN 245
++ A+ L + + + S+ C++C + F GD +PC H +H+ C+ PWL
Sbjct: 179 TQDAINCLHRQTFSSAEVKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCLNPWLRACG 238
Query: 246 SCPVCRHEL 254
CP CR +
Sbjct: 239 DCPCCRRAI 247
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 172 LAENDPNRRGTPPASKSAVEGLPDV---SVTEELLASDSAQCAVCKDIFGLGDTAKQMP- 227
LA N RG S +E P +V + ++ +C+VC + F +T + +P
Sbjct: 106 LATNRQQARG---LDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPK 162
Query: 228 CKHIYHADCILPWLEMHNSCPVCRHEL 254
C H++H CI WL H +CP+CR +L
Sbjct: 163 CCHVFHPGCIDAWLRSHTTCPLCRADL 189
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 186 SKSAVEGLPDVSVTEEL-LASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEM 243
K A+ P VS + E+ L +C +C F G+ + +P C H +H CI WL+
Sbjct: 110 KKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQH 169
Query: 244 HNSCPVCRHEL 254
H +CP CRH L
Sbjct: 170 HLTCPKCRHCL 180
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 206 DSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHEL 254
D +C++C GD A+ +P C H +H +CI W + H++CP+CR+ +
Sbjct: 123 DGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172
>AT3G16090.1 | Symbols: | RING/U-box superfamily protein |
chr3:5456513-5458694 FORWARD LENGTH=492
Length = 492
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 200 EELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
EEL ASD A C +C++ AK++ C H++H C+ WLE +CP CR
Sbjct: 283 EELTASD-ATCIICREEM---TNAKKLICGHLFHVHCLRSWLERQQTCPTCR 330
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 187 KSAVEGLPDVSVTEEL-LASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMH 244
K A+ P VS + E+ L +C +C F G+ + +P C H +H CI WL+ H
Sbjct: 112 KKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQH 171
Query: 245 NSCPVCRHEL 254
+CP CRH L
Sbjct: 172 LTCPKCRHCL 181
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 176 DPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHA 234
D N K A++ +P S + EL + +C +C F G+T + +P C H +H
Sbjct: 80 DTNANVAKGIKKRALKVIPVDSYSPEL-KMKATECLICLGDFVEGETVRVLPKCNHGFHV 138
Query: 235 DCILPWLEMHNSCPVCRHEL 254
CI WL H+SCP CR L
Sbjct: 139 KCIDTWLLSHSSCPTCRQSL 158
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 210 CAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPT 256
C +C+ + + +PCKH YH++CI WL+++ CPVC E+ T
Sbjct: 288 CVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVST 334
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 186 SKSAVEGLPD-------VSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCI 237
++ ++G P VS + + +S ++ C++C + D + +P C H++H +C+
Sbjct: 98 TEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCV 157
Query: 238 LPWLEMHNSCPVCR 251
PWL +H +CPVCR
Sbjct: 158 DPWLRLHPTCPVCR 171
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 179 RRGTPPASKSAVEGLPDVSVTEEL---LASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHA 234
RRG K +E P +E + +CA+C F +T + MP C H +HA
Sbjct: 92 RRGLE---KEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHA 148
Query: 235 DCILPWLEMHNSCPVCRHEL 254
+CI WL ++CPVCR L
Sbjct: 149 NCIDVWLSSWSTCPVCRANL 168
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 187 KSAVEGLPDVSVTEELLASDS-AQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMH 244
K ++ LP ++ + E S+ A+CA+C F GD + +P C H +H CI WL H
Sbjct: 87 KKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSH 146
Query: 245 NSCPVCRHEL 254
+SCP CR L
Sbjct: 147 SSCPSCRQIL 156
>AT1G18780.1 | Symbols: | RING/U-box superfamily protein |
chr1:6476258-6477235 REVERSE LENGTH=325
Length = 325
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 155 NHGDYFFGPGLEEL-------IQQLAENDPNRRGTPPASKSAVEGLPDVSVTEEL-LASD 206
+H + F +EE + Q++ N+ N PASK V L + + + +
Sbjct: 214 HHASFGFDHQIEEASHSQIEEVFQVSFNETNTVRLKPASKLTVGALNRKTYKKASGVVCE 273
Query: 207 SAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELP 255
+ C +C + F G + +PC H + +C+L W + CP+CR ELP
Sbjct: 274 NDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPLCRLELP 322
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 186 SKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMH 244
S +A G P V T A++ CAVC F GD + +P C H +H +CI WL H
Sbjct: 135 SAAACTGKPAVGKTS---AANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSH 191
Query: 245 NSCPVCRHEL 254
+CP+CR +
Sbjct: 192 PNCPLCRTAI 201
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 186 SKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMH 244
S +A G P V T A++ CAVC F GD + +P C H +H +CI WL H
Sbjct: 135 SAAACTGKPAVGKTS---AANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSH 191
Query: 245 NSCPVCRHEL 254
+CP+CR +
Sbjct: 192 PNCPLCRTAI 201
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 187 KSAVEGLP-------DVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCIL 238
+SA+ +P DV EE + +S +C+VC + F + + +P C H++H DCI
Sbjct: 104 ESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCID 163
Query: 239 PWLEMHNSCPVCR 251
WL+ + +CP+CR
Sbjct: 164 IWLQGNANCPLCR 176
>AT4G17245.1 | Symbols: | RING/U-box superfamily protein |
chr4:9669383-9669883 FORWARD LENGTH=166
Length = 166
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 165 LEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAK 224
L ++Q + + DP+ T P + + P ++ LA + A+C +C F GDT +
Sbjct: 62 LRPVLQHVPKPDPDLEATHPDAPPTLVYSPGLN-----LAGNEAECIICLSEFQDGDTLR 116
Query: 225 QMP-CKHIYHADCILPWL-EMHNSCPVCRHELPTDDPDYEQRA 265
+ CKH +H CI WL H+SCP CR + + P ++
Sbjct: 117 VLERCKHGFHVYCIQKWLSSSHSSCPTCRTNIFSSPPQLHSQS 159
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 207 SAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHEL 254
+ +CA+C F G+ + +P C H +H CI WL H+SCP CRH L
Sbjct: 102 ATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSL 150
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 179 RRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCI 237
RRG AV LP T+ + C +C F G+T K +P C H++H DC+
Sbjct: 113 RRG---LDSQAVRSLPVYRYTKAA-KQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCV 168
Query: 238 LPWLEMHNSCPVCRHELPTDDPD 260
WL + +CP+CR D D
Sbjct: 169 DTWLSSYVTCPLCRSNQLFSDKD 191
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 187 KSAVEGLPDVSVTEEL-LASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMH 244
K A++ LP V+ + E+ L +C +C F G+ + +P C H +H CI WL H
Sbjct: 106 KKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQH 165
Query: 245 NSCPVCRHEL 254
+CP CRH L
Sbjct: 166 MTCPKCRHCL 175
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 200 EELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHEL 254
E +L + A C +C + G +PC H +H+ CI+ WL+M+ +CP+C+ +
Sbjct: 282 ERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNI 336
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 174 ENDPNRRGTPPASKSAVEGLPDVSVTEEL-LASDSAQCAVCKDIFGLGDTAKQM-PCKHI 231
E + + + P A+ S+ P + + +L LA A+CA+C F G++ + + C+H
Sbjct: 70 ETEDDHKPDPEAAASSTPTTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHG 129
Query: 232 YHADCILPWLEMHNSCPVCR 251
+H CI WL +SCP CR
Sbjct: 130 FHVKCIHKWLSTRSSCPTCR 149
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 120 LQNYVQTLAAGGANVQFVIENSGDPTGAFRIPSNVNHGDYFFGPGLEELIQQLAENDPNR 179
L+ Y + N QF E+ + T PS+ HGD F EEL+ E R
Sbjct: 149 LEQYWRNWLQSSTNEQFETESLEEYTN----PSS--HGDIF---TYEELLSITDETGDER 199
Query: 180 RGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILP 239
G S+ ++ E+ ++ +C +C+ + ++ C H +H CI
Sbjct: 200 TG---LSEEVIDENLIRRKYEKRSDDETKRCVICQQKLKDNEEVSKLGCGHDFHFGCIKN 256
Query: 240 WLEMHNSCPVCRHEL 254
WL + N CP+C E+
Sbjct: 257 WLMVTNKCPLCNREV 271
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 209 QCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
+C +C+D + D ++ C H +H DC+ WL NSCPVC+
Sbjct: 318 KCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCK 360
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 210 CAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCR 251
C +C G + ++PC H++H DCI+ WL+ + SCP+CR
Sbjct: 174 CPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICR 215
>AT3G13228.1 | Symbols: | RING/U-box superfamily protein |
chr3:4267075-4268052 FORWARD LENGTH=325
Length = 325
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 184 PASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEM 243
PASK V+ L + + +C +C + F G +PC H + +C + W E
Sbjct: 251 PASKLVVKSL--TRKIYDKINYTGERCTICLEEFNAGGILVALPCGHDFDDECAVKWFET 308
Query: 244 HNSCPVCRHELPTDD 258
++ CP+CR+ELP ++
Sbjct: 309 NHFCPLCRYELPREE 323
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 190 VEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCP 248
+E +P ++ E + + S +CAVC + G + + +P C H +H C WL H CP
Sbjct: 84 LEKIPKLTGRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCP 143
Query: 249 VCRHELPTDDPD 260
VCR EL + P
Sbjct: 144 VCRAELAPNLPQ 155
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 209 QCAVCKDIFGLGDTAKQM-PCKHIYHADCILPWLEMHNSCPVCRHELPTDD 258
QC++C F DT + + C H +H CI W E H +CPVCR EL +D
Sbjct: 153 QCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDVED 203
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 186 SKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMH 244
S ++ LP ++ E++ C +C G+ + +P C H +H C+ WL H
Sbjct: 152 SGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRH 211
Query: 245 NSCPVCRHELP 255
SCP+CR +
Sbjct: 212 GSCPICRQAVK 222
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 24/119 (20%)
Query: 154 VNHGDYFFGPGLEELIQQLAENDPNRRGTPPASKSAVEGLPDVSVTEELLASD------- 206
+NH F L++ ++++PN P S GL ++ V + L+ +
Sbjct: 27 INHLRSF-------LLRLTSKSNPN---LPVDDVSIASGLANIIVLADQLSLNRLFSYRC 76
Query: 207 ------SAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHN-SCPVCRHELPTDD 258
+ C VC G+ +++ C+H++H C+ WL N +CP+CR L +DD
Sbjct: 77 GDGGGGGSDCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135
>AT5G22000.3 | Symbols: RHF2A | RING-H2 group F2A |
chr5:7277436-7279553 FORWARD LENGTH=375
Length = 375
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 210 CAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDPDYEQ 263
C++C + F D + CKH YH CIL W + + CP+C + DP ++
Sbjct: 33 CSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTSQE 86
>AT5G22000.1 | Symbols: RHF2A | RING-H2 group F2A |
chr5:7277436-7279553 FORWARD LENGTH=375
Length = 375
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 210 CAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDPDYEQ 263
C++C + F D + CKH YH CIL W + + CP+C + DP ++
Sbjct: 33 CSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTSQE 86
>AT5G22000.2 | Symbols: RHF2A | RING-H2 group F2A |
chr5:7277436-7279553 FORWARD LENGTH=375
Length = 375
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 210 CAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELPTDDPDYEQ 263
C++C + F D + CKH YH CIL W + + CP+C + DP ++
Sbjct: 33 CSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTSQE 86
>AT1G21960.1 | Symbols: | RING/U-box superfamily protein |
chr1:7725972-7726586 FORWARD LENGTH=204
Length = 204
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 169 IQQLAENDPNRRGTPPASKSAVEGLP-DVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP 227
I E N PA+K V+ L V ++ SD++ C +C + F G+ +P
Sbjct: 116 IDSFDETTNNIELIRPANKLVVDRLARKVYNKKKKSNSDASVCTICLEEFEKGEIVVTLP 175
Query: 228 CKHIYHADCILPWLEMHNSCPVCRHELP 255
C H + CI W + CP+CR ELP
Sbjct: 176 CGHEFDDGCIGKWFLKDHVCPLCRFELP 203
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 179 RRGTPPASKSAVEGLPDVSVTEEL---LASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHA 234
RRG K VE P +E + +CA+C F +T + MP C H +HA
Sbjct: 92 RRG---LEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHA 148
Query: 235 DCILPWLEMHNSCPVCRHEL 254
+CI WL ++CP CR L
Sbjct: 149 NCIDVWLSSQSTCPACRANL 168
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 203 LASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHE 253
L +DS C +C++ + D + C H YHA+C+ WL + N CP+C+ E
Sbjct: 423 LETDS--CTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 203 LASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHE 253
L +DS C +C++ + D + C H YHA+C+ WL + N CP+C+ E
Sbjct: 423 LETDS--CTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 187 KSAVEGLPDVSVT-EELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWL-EMH 244
+ V+ +P V+ T ++ + CA+C + + +GD + +PC H +H C+ WL
Sbjct: 208 RRTVKAMPSVTFTCAKIDNTTGFSCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWR 267
Query: 245 NSCPVCRHELPT--DDP 259
CPVC+ + T D+P
Sbjct: 268 TFCPVCKRDARTTADEP 284
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 206 DSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHELPTDDPDYEQR 264
S C +C + G+ +++ C H +H DCI PWLE + CP+CR E+P P R
Sbjct: 66 SSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIPPVPPGNPLR 125
Query: 265 A 265
A
Sbjct: 126 A 126
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 209 QCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCRHEL 254
+C+VC +F D +Q+ CKH +H CI WL+ H +CP+CR ++
Sbjct: 141 ECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDV 187
>AT3G15740.1 | Symbols: | RING/U-box superfamily protein |
chr3:5333879-5334553 REVERSE LENGTH=224
Length = 224
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 181 GTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGD--TAKQMPCKHIYHADCIL 238
PA+ AVE E L+ + C +C D +G A +MPC H++H C
Sbjct: 152 AVAPANDEAVE-----MHLETLVVENEGYCVICMDNIRVGSDVEAGRMPCSHVFHRTCGE 206
Query: 239 PWLEMHNSCPVCRHELP 255
WL CPVCR P
Sbjct: 207 EWLRNSGICPVCRALFP 223
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 199 TEELLASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHE-LPTD 257
E L + A+C +C + G +++PC H +H C+ WL ++ +CP+C++ L +
Sbjct: 342 IEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSS 401
Query: 258 DPDYEQ 263
+ D E+
Sbjct: 402 NLDREE 407
>AT5G41440.1 | Symbols: | RING/U-box superfamily protein |
chr5:16587235-16587609 REVERSE LENGTH=124
Length = 124
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 174 ENDPNRRGTPPASKSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIY 232
+ D P +K+ VE + V EE D C++C + F +G + C+H++
Sbjct: 45 QQDIETGHIPAINKTTVETIIKVEDVEE---GDEGCCSICLEEFKIGHELMCIKKCRHVF 101
Query: 233 HADCILPWLEMHNSCPVCR 251
H C+L W++ + +CP+CR
Sbjct: 102 HRFCMLSWIDANRNCPICR 120
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 204 ASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELP 255
+D +C +C + + +++PC H +H+ C+ WL + + CP+C+ +LP
Sbjct: 291 VTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLP 342
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 204 ASDSAQCAVCKDIFGLGDTAKQMPCKHIYHADCILPWLEMHNSCPVCRHELP 255
+D +C +C + + +++PC H +H+ C+ WL + + CP+C+ +LP
Sbjct: 291 VTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLP 342
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 187 KSAVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHN 245
+SA+ + V + D +C+VC + F ++ + +P C H +H +CI WL H
Sbjct: 112 RSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHK 171
Query: 246 SCPVCR 251
+CP+CR
Sbjct: 172 NCPLCR 177
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 189 AVEGLPDVSVTEELLASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSC 247
++ P + +E + ++ CA+C + +Q+P C H++H CI WL ++ +C
Sbjct: 126 TIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTC 185
Query: 248 PVCRHE-LPT 256
PVCR LPT
Sbjct: 186 PVCRTSPLPT 195
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 179 RRGTPPASKSAVEGLPDVSVTEEL---LASDSAQCAVCKDIFGLGDTAKQMP-CKHIYHA 234
RRG K +E P +E + + +CA+C F + + MP C H +HA
Sbjct: 89 RRGI---DKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHA 145
Query: 235 DCILPWLEMHNSCPVCRHELPTDDPD 260
+CI WL ++CPVCR L D
Sbjct: 146 NCIDEWLSSRSTCPVCRANLSLKSGD 171
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 210 CAVCKDIFGLGDTAKQMP-CKHIYHADCILPWLEMHNSCPVCR 251
CAVC F D + +P C H +H DCI WL H++CP+CR
Sbjct: 134 CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176