Miyakogusa Predicted Gene

Lj2g3v0609800.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0609800.2 CUFF.34825.2
         (349 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23130.1 | Symbols:  | Peptidoglycan-binding LysM domain-cont...   192   4e-49
AT5G08200.1 | Symbols:  | peptidoglycan-binding LysM domain-cont...   176   2e-44

>AT5G23130.1 | Symbols:  | Peptidoglycan-binding LysM
           domain-containing protein | chr5:7781475-7783333 FORWARD
           LENGTH=397
          Length = 397

 Score =  192 bits (487), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/345 (37%), Positives = 184/345 (53%), Gaps = 34/345 (9%)

Query: 23  YIKHQVSKLDTLAGVAIKYGVEVADIKRMNGLASDLQMFALKTLKI--------XXXXXX 74
           YI+H+VSK DTLAG+AIKYGVEVADI ++NGL +DLQMFAL++L+I              
Sbjct: 69  YIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLRIPLPGRHPPSPCLSN 128

Query: 75  XXXXXXXXXXXXXAKLRENGNHRRFPRLGQSAMKEPLQNFRLKAPQPKLSPAMSILQKYY 134
                        +    NGNH+         + +  Q+ RL   + K+SPAM+ LQ YY
Sbjct: 129 GSLNHGEDWSEQASSSASNGNHQ--------DVFDSFQSLRLNHSEKKISPAMNSLQGYY 180

Query: 135 GLQXXXXXXXXXXXXMAMYRXXXXXXXXEEWLPKASPISDLPTNHNPKSTNLVFDLLTGY 194
           GL+            MA+Y+         +      P +  P +H+ KS +LV  ++   
Sbjct: 181 GLKPKNRRASEGFG-MAVYKNEASQLQDNDQYLTPFPATSTPLSHHRKSRSLVDAVIAEV 239

Query: 195 DDMPEYVPFAEMGDGGGE-KSDEKSVRRRQKAEVDNGNTTPE------RXXXXXXXXXXT 247
           +  P          GGGE  S +K +RRRQK+E D  +  PE                  
Sbjct: 240 NQSPN-----PSKAGGGEVNSTDKPMRRRQKSEADFSSRAPELLLKEENRSSSGAFSAIA 294

Query: 248 GKAISMRPKSASRATLLPESESGWLDSIPMGLGDSIFTDRLSGVRKSSSASSLREQEKN- 306
           GK +++R K++SRA L   +E+  L+SIP+ L D+   D  S VRKS SASSL+E   N 
Sbjct: 295 GKNLALRSKASSRANL--SAETRHLNSIPINLMDAPVGDSFSSVRKSVSASSLQEPNCNS 352

Query: 307 NSATGWPPARWSLKPDL--QAAISKPIFDGLPIPISGRRSKAALD 349
           N ++ WP ++W+LKP+L  Q A++  IFDGLP P++GRR+K A+D
Sbjct: 353 NGSSLWPTSKWTLKPELLTQVAMASSIFDGLPKPLTGRRNKKAVD 397


>AT5G08200.1 | Symbols:  | peptidoglycan-binding LysM
           domain-containing protein | chr5:2638385-2640508 FORWARD
           LENGTH=409
          Length = 409

 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/347 (37%), Positives = 183/347 (52%), Gaps = 34/347 (9%)

Query: 23  YIKHQVSKLDTLAGVAIKYGVEVADIKRMNGLASDLQMFALKTLKI-----XXXXXXXXX 77
           YI+H++SK DTLAGVAIKYGVEVAD+K+MN L +DLQMFALK+L+I              
Sbjct: 77  YIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALKSLQIPLPGRHPPSPCLSN 136

Query: 78  XXXXXXXXXXAKLRENGNHRRFPRLGQSAMKEPLQNFRLKAPQPKLSPAMSILQKYYGLQ 137
                         E+ NH       +  + +  Q+ RLK+ + K+SPAM  LQ YYGL+
Sbjct: 137 GSLNHGEGCSCHEPESPNH------SEQEVFDSFQSLRLKSSEKKVSPAMYSLQGYYGLK 190

Query: 138 -XXXXXXXXXXXXMAMYRXXXXX---XXXEEWLPKASPISDLPTNHNPKSTNLVFDLLTG 193
                        M  Y+           +    +  P ++ P NH+ KS +LV  L+  
Sbjct: 191 PADRTVSDGGCFEMGNYKTETSHHIFNNGDNGYLRPFPSTNTPLNHHRKSRSLVNALIEE 250

Query: 194 YDDMPEYVPFAEMGDGGGEKSDEKSVRRRQKAEVDNGNTTP------ERXXXXXXXXXXT 247
            +  P+        +   E + +K +RRRQK+E D  + TP      E            
Sbjct: 251 VNQSPD--------NNTQEPTSDKFMRRRQKSEADFSSRTPELVLKEENGSSNGGFLSIA 302

Query: 248 GKAISMRPKSASRATLLPESESGWLDSIPMGLGDSIFTDRLSGVRKSSSASSLRE---QE 304
           GK +++R K++SR  L  ESE+G  + + M L D+  +D  S VRKSSSASSL++     
Sbjct: 303 GKGLALRSKASSRTNLAAESENGNFNPVSMNLMDAPVSDSFSSVRKSSSASSLQDPDGNS 362

Query: 305 KNNSATGWPPARWSLKPDL--QAAISKPIFDGLPIPISGRRSKAALD 349
            N S + WP ++WSLKPDL   AAI+  IFDGLP P++GRR+K ALD
Sbjct: 363 NNGSLSLWPTSKWSLKPDLLTPAAITSSIFDGLPKPLTGRRNKTALD 409