Miyakogusa Predicted Gene

Lj2g3v0609720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0609720.1 tr|F2DBE0|F2DBE0_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,88.75,0,CoA_binding,CoA-binding; Ligase_CoA,ATP-citrate
lyase/succinyl-CoA ligase; Succinyl-CoA synthetase d,CUFF.34829.1
         (317 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23250.1 | Symbols:  | Succinyl-CoA ligase, alpha subunit | c...   539   e-154
AT5G08300.1 | Symbols:  | Succinyl-CoA ligase, alpha subunit | c...   535   e-152
AT5G23250.2 | Symbols:  | Succinyl-CoA ligase, alpha subunit | c...   479   e-135
AT3G06650.1 | Symbols: ACLB-1 | ATP-citrate lyase B-1 | chr3:207...    96   4e-20
AT5G49460.1 | Symbols: ACLB-2 | ATP citrate lyase subunit B 2 | ...    95   8e-20

>AT5G23250.1 | Symbols:  | Succinyl-CoA ligase, alpha subunit |
           chr5:7830460-7832491 FORWARD LENGTH=341
          Length = 341

 Score =  539 bits (1389), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 266/298 (89%), Positives = 278/298 (93%), Gaps = 1/298 (0%)

Query: 21  RHLSATASSPA-VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLG 79
           R    T   PA VFVDK+TRVICQGITGKNGTFHTEQAIEYGT MV GVTPKKGGTEHLG
Sbjct: 35  RSFGTTPPPPAAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVAGVTPKKGGTEHLG 94

Query: 80  LPVFNTVAEAKAETKANASVIYVPPPFAAKAIMEALEAELDLVVCITEGIPQHDMVRVKA 139
           LPVFNTVAEAKAETKANASVIYVP PFAA AIME L AELDL+VCITEGIPQHDMVRVKA
Sbjct: 95  LPVFNTVAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKA 154

Query: 140 AINRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTSAVG 199
           A+N QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPG+IGIVSRSGTLTYEAVFQT+AVG
Sbjct: 155 ALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVG 214

Query: 200 LGQSTCVGIGGDPFNGTNFVDCLKKFLSDPQTEGIVLIGEIGGTAEEDAAALIKESGTEK 259
           LGQSTCVGIGGDPFNGTNFVDCL+KF  DPQTEGIVLIGEIGGTAEEDAAALIKE+GT+K
Sbjct: 215 LGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKENGTDK 274

Query: 260 PIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLKEAGVTVVESPAKIGTAMLE 317
           P+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIK+L++AGV VVESPAKIG AM E
Sbjct: 275 PVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLRDAGVKVVESPAKIGAAMFE 332


>AT5G08300.1 | Symbols:  | Succinyl-CoA ligase, alpha subunit |
           chr5:2667579-2669672 FORWARD LENGTH=347
          Length = 347

 Score =  535 bits (1377), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 260/287 (90%), Positives = 274/287 (95%)

Query: 31  AVFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNTVAEAK 90
           AVFVDK+TRV+CQGITGKNGTFHTEQAIEYGT MV GVTPKKGGTEHLGLPVFN+VAEAK
Sbjct: 51  AVFVDKNTRVLCQGITGKNGTFHTEQAIEYGTKMVAGVTPKKGGTEHLGLPVFNSVAEAK 110

Query: 91  AETKANASVIYVPPPFAAKAIMEALEAELDLVVCITEGIPQHDMVRVKAAINRQSKTRLI 150
           A+TKANASVIYVP PFAA AIME +EAELDL+VCITEGIPQHDMVRVK A+N QSKTRLI
Sbjct: 111 ADTKANASVIYVPAPFAAAAIMEGIEAELDLIVCITEGIPQHDMVRVKHALNSQSKTRLI 170

Query: 151 GPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTSAVGLGQSTCVGIGG 210
           GPNCPGIIKPGECKIGIMPGYIHKPG+IGIVSRSGTLTYEAVFQT+AVGLGQSTCVGIGG
Sbjct: 171 GPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGG 230

Query: 211 DPFNGTNFVDCLKKFLSDPQTEGIVLIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTA 270
           DPFNGTNFVDCL+KF  DPQTEGIVLIGEIGGTAEEDAAALIK SGTEKP+VAFIAGLTA
Sbjct: 231 DPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKASGTEKPVVAFIAGLTA 290

Query: 271 PPGRRMGHAGAIVSGGKGTAQDKIKTLKEAGVTVVESPAKIGTAMLE 317
           PPGRRMGHAGAIVSGGKGTAQDKIK+L +AGV VVESPAKIG+AM E
Sbjct: 291 PPGRRMGHAGAIVSGGKGTAQDKIKSLNDAGVKVVESPAKIGSAMYE 337


>AT5G23250.2 | Symbols:  | Succinyl-CoA ligase, alpha subunit |
           chr5:7830460-7832265 FORWARD LENGTH=297
          Length = 297

 Score =  479 bits (1232), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 235/261 (90%), Positives = 244/261 (93%), Gaps = 1/261 (0%)

Query: 21  RHLSATASSPA-VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLG 79
           R    T   PA VFVDK+TRVICQGITGKNGTFHTEQAIEYGT MV GVTPKKGGTEHLG
Sbjct: 35  RSFGTTPPPPAAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVAGVTPKKGGTEHLG 94

Query: 80  LPVFNTVAEAKAETKANASVIYVPPPFAAKAIMEALEAELDLVVCITEGIPQHDMVRVKA 139
           LPVFNTVAEAKAETKANASVIYVP PFAA AIME L AELDL+VCITEGIPQHDMVRVKA
Sbjct: 95  LPVFNTVAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKA 154

Query: 140 AINRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTSAVG 199
           A+N QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPG+IGIVSRSGTLTYEAVFQT+AVG
Sbjct: 155 ALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVG 214

Query: 200 LGQSTCVGIGGDPFNGTNFVDCLKKFLSDPQTEGIVLIGEIGGTAEEDAAALIKESGTEK 259
           LGQSTCVGIGGDPFNGTNFVDCL+KF  DPQTEGIVLIGEIGGTAEEDAAALIKE+GT+K
Sbjct: 215 LGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKENGTDK 274

Query: 260 PIVAFIAGLTAPPGRRMGHAG 280
           P+VAFIAGLTAPPGRRMGHAG
Sbjct: 275 PVVAFIAGLTAPPGRRMGHAG 295


>AT3G06650.1 | Symbols: ACLB-1 | ATP-citrate lyase B-1 |
           chr3:2079247-2082633 REVERSE LENGTH=608
          Length = 608

 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 12/210 (5%)

Query: 119 LDLVVCITEGIPQHDMVRVKAAINRQSKTRLIGPNCPGIIKPGECKIGIMPGYI------ 172
           + +V  I EG+P+ D  ++  A  R +   +IGP   G ++ G  KIG   G I      
Sbjct: 104 IKVVAIIAEGVPESDTKQL-IAYARANNKVIIGPATVGGVQAGAFKIGDTAGTIDNIIQC 162

Query: 173 --HKPGRIGIVSRSGTLTYEAVFQTSAVGLGQSTCVGIGGDPFNGTNFVDCLKKFLSDPQ 230
             ++PG +G VS+SG ++ E     + V  G    + IGGD F G+   D + +F + PQ
Sbjct: 163 KLYRPGSVGFVSKSGGMSNEMYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQ 222

Query: 231 TEGIVLIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGR---RMGHAGAIVSGGK 287
            + +V++GE+GG  E      +K+    KP+VA+++G  A   +   + GHAGA   G  
Sbjct: 223 IKMVVVLGELGGRDEYSLVEAMKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEM 282

Query: 288 GTAQDKIKTLKEAGVTVVESPAKIGTAMLE 317
            +AQ K + L++AG TV  S   +  A+ E
Sbjct: 283 ESAQAKNQALQDAGATVPTSFEALEVAIKE 312


>AT5G49460.1 | Symbols: ACLB-2 | ATP citrate lyase subunit B 2 |
           chr5:20055048-20058195 FORWARD LENGTH=608
          Length = 608

 Score = 94.7 bits (234), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 12/210 (5%)

Query: 119 LDLVVCITEGIPQHDMVRVKAAINRQSKTRLIGPNCPGIIKPGECKIGIMPGYI------ 172
           + +V  I EG+P+ D  ++  A  R +   +IGP   G I+ G  KIG   G I      
Sbjct: 104 IKVVAIIAEGVPESDTKQL-IAYARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQC 162

Query: 173 --HKPGRIGIVSRSGTLTYEAVFQTSAVGLGQSTCVGIGGDPFNGTNFVDCLKKFLSDPQ 230
             ++PG +G VS+SG ++ E     + V  G    + IGGD F G+   D + +F + PQ
Sbjct: 163 KLYRPGSVGFVSKSGGMSNEMYNTVARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQ 222

Query: 231 TEGIVLIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGR---RMGHAGAIVSGGK 287
            + +V++GE+GG  E      +KE    KP+VA+++G  A   +   + GHAGA   G  
Sbjct: 223 IKMMVVLGELGGRDEYSLVEALKEGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEM 282

Query: 288 GTAQDKIKTLKEAGVTVVESPAKIGTAMLE 317
            +AQ K + L +AG  V  S   + +A+ E
Sbjct: 283 ESAQAKNQALIDAGAIVPTSFEALESAIKE 312