Miyakogusa Predicted Gene

Lj2g3v0609710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0609710.1 Non Chatacterized Hit- tr|G7KKB5|G7KKB5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,81.26,0,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; seg,NULL; DUF4101,Domain of unkno,CUFF.34820.1
         (815 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G19180.1 | Symbols: ARC6H, PARC6, ATCDP1, CDP1 | paralog of A...   764   0.0  
AT3G19180.2 | Symbols: ARC6H, PARC6, ATCDP1, CDP1 | paralog of A...   674   0.0  
AT5G42480.1 | Symbols: ARC6 | Chaperone DnaJ-domain superfamily ...   100   7e-21

>AT3G19180.1 | Symbols: ARC6H, PARC6, ATCDP1, CDP1 | paralog of ARC6
           | chr3:6632810-6636953 FORWARD LENGTH=819
          Length = 819

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/739 (53%), Positives = 502/739 (67%), Gaps = 20/739 (2%)

Query: 81  TVEIPVSCYQLIGVPDRAEKDEIVKAVMGLKNAEIEEGYTISVVASRQDLLMDVRDKLLF 140
           T+E+PV+CYQLIGV ++AEKDE+VK+V+ LK  + EEGYT+   A+RQDLLMDVRDKLLF
Sbjct: 92  TIELPVTCYQLIGVSEQAEKDEVVKSVINLKKTDAEEGYTMEAAAARQDLLMDVRDKLLF 151

Query: 141 EPEYAGNLKEKIPPKSSLRVPWSWLPAALCLLQEVGESKLVLDIGRTSLQQQDAKPYTDD 200
           E EYAGNLKEKI PKS LR+PW+WLP ALCLLQEVG+ KLVLDIGR +L+  D+KPY  D
Sbjct: 152 ESEYAGNLKEKIAPKSPLRIPWAWLPGALCLLQEVGQEKLVLDIGRAALRNLDSKPYIHD 211

Query: 201 LVLSMALAECAVAKIGFEKNKVSQGFEALARAQCLLRSKPSLAKMTXXXXXXXXXXXXAP 260
           + LSMALAECA+AK  FE NKVSQGFEALARAQ  L+SK +L K+             AP
Sbjct: 212 IFLSMALAECAIAKAAFEVNKVSQGFEALARAQSFLKSKVTLGKLALLTQIEESLEELAP 271

Query: 261 ACTLELLSMSNTPENIDRRRGAIAALRELLRQGLDVEASCQVQDWPSFLSQALGCLLANE 320
            CTL+LL +  TPEN +RRRGAIAALRELLRQGL VEASCQ+QDWP FLSQA+  LLA E
Sbjct: 272 PCTLDLLGLPRTPENAERRRGAIAALRELLRQGLSVEASCQIQDWPCFLSQAISRLLATE 331

Query: 321 IVDLLPWDSLAVMRKNKKTIESQNLRVIIDSSCFYRVFTAHLALGFSSKHKELIHKAKNI 380
           IVDLLPWD LA+ RKNKK++ES N RV+ID +CFY V   H+A+GFS K  E I+KAK I
Sbjct: 332 IVDLLPWDDLAITRKNKKSLESHNQRVVIDFNCFYMVLLGHIAVGFSGKQNETINKAKTI 391

Query: 381 CECLIASEGFDLKFEEAFCLFLLGLGTEAEAVEKLKQLELNSNPK-HNSVLGKAIMDASD 439
           CECLIASEG DLKFEEAFC FLL  G+EAEA+EKLKQLE NS+    NS+LGK     S 
Sbjct: 392 CECLIASEGVDLKFEEAFCSFLLKQGSEAEALEKLKQLESNSDSAVRNSILGKESRSTS- 450

Query: 440 ANPSLEMWLKDSVLDLYPDTKGCSPALASFFNAQKKISGSKNSKGATQTSSTICHRPLSS 499
           A PSLE WL +SVL  +PDT+GCSP+LA+FF A+KK   +K     +  +     RPLS+
Sbjct: 451 ATPSLEAWLMESVLANFPDTRGCSPSLANFFRAEKKYPENKKMGSPSIMNHKTNQRPLST 510

Query: 500 SGSVERRDFEEPRSYMSSSPNLGFAVKQLAPTDLQSSLLSGKNENGPNLSESPVKVKRSL 559
           +             +++SS +L  AV+QL PTDLQS ++S KN +  + S   V++KR+L
Sbjct: 511 T------------QFVNSSQHLYTAVEQLTPTDLQSPVVSAKNNDETSASMPSVQLKRNL 558

Query: 560 GTHHNGVWDSHFTGAHIFERITHFTVLGCIAFATIKLLGINISKNFTGSNWAFTKANH-- 617
           G H N +WD   + + +  R++   +LGC  F ++KL GI  S        + +   H  
Sbjct: 559 GVHKNKIWDEWLSQSSLIGRVSVVALLGCTVFFSLKLSGIR-SGRLQSMPISVSARPHSE 617

Query: 618 --NIAWTADSSSNYPVGPYMRRSTISDKLERILSRVKIHFLHRSDAGF-RSDLHTAHSSS 674
             +  W  +S +       + R+ I   ++ ++  +K+H     DA + +S   +A S S
Sbjct: 618 SDSFLWKTESGNFRKNLDSVNRNGIVGNIKVLIDMLKMHCGEHPDALYLKSSGQSATSLS 677

Query: 675 SFSIKVYRRQMPVEEAETLIRQWQEIKAEALGPSHEVNSLAEVLDEPMLAQWQALADAAK 734
             + ++++R M  EEAE L+RQW+ +KAEALGP+H+V SL+EVLDE ML QWQ LA  A+
Sbjct: 678 HSASELHKRPMDTEEAEELVRQWENVKAEALGPTHQVYSLSEVLDESMLVQWQTLAQTAE 737

Query: 735 EKSCHWRFLLLKLSVLRADILSDGNETDMXXXXXXXXXXXXXVDSSQQKNPNYLSTYKVR 794
            KSC+WRF+LL L VL+A I  DG   +              VD SQ KN  Y STYK+R
Sbjct: 738 AKSCYWRFVLLHLEVLQAHIFEDGIAGEAAEIEALLEEAAELVDESQPKNAKYYSTYKIR 797

Query: 795 YVLKMQDDGSWKFCEGDIR 813
           Y+LK Q+DG WKFC+ DI+
Sbjct: 798 YILKKQEDGLWKFCQSDIQ 816


>AT3G19180.2 | Symbols: ARC6H, PARC6, ATCDP1, CDP1 | paralog of ARC6
           | chr3:6632810-6636547 FORWARD LENGTH=748
          Length = 748

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/651 (53%), Positives = 448/651 (68%), Gaps = 20/651 (3%)

Query: 81  TVEIPVSCYQLIGVPDRAEKDEIVKAVMGLKNAEIEEGYTISVVASRQDLLMDVRDKLLF 140
           T+E+PV+CYQLIGV ++AEKDE+VK+V+ LK  + EEGYT+   A+RQDLLMDVRDKLLF
Sbjct: 92  TIELPVTCYQLIGVSEQAEKDEVVKSVINLKKTDAEEGYTMEAAAARQDLLMDVRDKLLF 151

Query: 141 EPEYAGNLKEKIPPKSSLRVPWSWLPAALCLLQEVGESKLVLDIGRTSLQQQDAKPYTDD 200
           E EYAGNLKEKI PKS LR+PW+WLP ALCLLQEVG+ KLVLDIGR +L+  D+KPY  D
Sbjct: 152 ESEYAGNLKEKIAPKSPLRIPWAWLPGALCLLQEVGQEKLVLDIGRAALRNLDSKPYIHD 211

Query: 201 LVLSMALAECAVAKIGFEKNKVSQGFEALARAQCLLRSKPSLAKMTXXXXXXXXXXXXAP 260
           + LSMALAECA+AK  FE NKVSQGFEALARAQ  L+SK +L K+             AP
Sbjct: 212 IFLSMALAECAIAKAAFEVNKVSQGFEALARAQSFLKSKVTLGKLALLTQIEESLEELAP 271

Query: 261 ACTLELLSMSNTPENIDRRRGAIAALRELLRQGLDVEASCQVQDWPSFLSQALGCLLANE 320
            CTL+LL +  TPEN +RRRGAIAALRELLRQGL VEASCQ+QDWP FLSQA+  LLA E
Sbjct: 272 PCTLDLLGLPRTPENAERRRGAIAALRELLRQGLSVEASCQIQDWPCFLSQAISRLLATE 331

Query: 321 IVDLLPWDSLAVMRKNKKTIESQNLRVIIDSSCFYRVFTAHLALGFSSKHKELIHKAKNI 380
           IVDLLPWD LA+ RKNKK++ES N RV+ID +CFY V   H+A+GFS K  E I+KAK I
Sbjct: 332 IVDLLPWDDLAITRKNKKSLESHNQRVVIDFNCFYMVLLGHIAVGFSGKQNETINKAKTI 391

Query: 381 CECLIASEGFDLKFEEAFCLFLLGLGTEAEAVEKLKQLELNSNPK-HNSVLGKAIMDASD 439
           CECLIASEG DLKFEEAFC FLL  G+EAEA+EKLKQLE NS+    NS+LGK     S 
Sbjct: 392 CECLIASEGVDLKFEEAFCSFLLKQGSEAEALEKLKQLESNSDSAVRNSILGKESRSTS- 450

Query: 440 ANPSLEMWLKDSVLDLYPDTKGCSPALASFFNAQKKISGSKNSKGATQTSSTICHRPLSS 499
           A PSLE WL +SVL  +PDT+GCSP+LA+FF A+KK   +K     +  +     RPLS+
Sbjct: 451 ATPSLEAWLMESVLANFPDTRGCSPSLANFFRAEKKYPENKKMGSPSIMNHKTNQRPLST 510

Query: 500 SGSVERRDFEEPRSYMSSSPNLGFAVKQLAPTDLQSSLLSGKNENGPNLSESPVKVKRSL 559
           +             +++SS +L  AV+QL PTDLQS ++S KN +  + S   V++KR+L
Sbjct: 511 T------------QFVNSSQHLYTAVEQLTPTDLQSPVVSAKNNDETSASMPSVQLKRNL 558

Query: 560 GTHHNGVWDSHFTGAHIFERITHFTVLGCIAFATIKLLGINISKNFTGSNWAFTKANH-- 617
           G H N +WD   + + +  R++   +LGC  F ++KL GI  S        + +   H  
Sbjct: 559 GVHKNKIWDEWLSQSSLIGRVSVVALLGCTVFFSLKLSGIR-SGRLQSMPISVSARPHSE 617

Query: 618 --NIAWTADSSSNYPVGPYMRRSTISDKLERILSRVKIHFLHRSDAGF-RSDLHTAHSSS 674
             +  W  +S +       + R+ I   ++ ++  +K+H     DA + +S   +A S S
Sbjct: 618 SDSFLWKTESGNFRKNLDSVNRNGIVGNIKVLIDMLKMHCGEHPDALYLKSSGQSATSLS 677

Query: 675 SFSIKVYRRQMPVEEAETLIRQWQEIKAEALGPSHEVNSLAEVLDEPMLAQ 725
             + ++++R M  EEAE L+RQW+ +KAEALGP+H+V SL+EVLDE ML Q
Sbjct: 678 HSASELHKRPMDTEEAEELVRQWENVKAEALGPTHQVYSLSEVLDESMLVQ 728


>AT5G42480.1 | Symbols: ARC6 | Chaperone DnaJ-domain superfamily
           protein | chr5:16985295-16988332 FORWARD LENGTH=801
          Length = 801

 Score = 99.8 bits (247), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 178/786 (22%), Positives = 295/786 (37%), Gaps = 126/786 (16%)

Query: 82  VEIPVSCYQLIGVPDRAEKDEIVKAVMGLKNAEIEEGYTISVVASRQDLLMDVRDKL--- 138
           V IP+  YQ++G       D I +A     +   + G++   + SR+ +L    + L   
Sbjct: 84  VPIPIDFYQVLGAQTHFLTDGIRRAFEARVSKPPQFGFSDDALISRRQILQAACETLSNP 143

Query: 139 LFEPEYAGNLKEKIPPKSSLRVPWSWLPAALCLLQEVGESKLVLDIGRTSLQQQDAKPYT 198
               EY   L +         VPW  +P ALC+LQE GE+++VL +G   L+++  K + 
Sbjct: 144 RSRREYNEGLLDDEEATVITDVPWDKVPGALCVLQEGGETEIVLRVGEALLKERLPKSFK 203

Query: 199 DDLVLSMALAECAVAK--IGFEKNKVSQGFEALARAQCLLRSK--PSLAKMTXXXXXXXX 254
            D+VL MALA   V++  +  +      G+E +  A  LL+ +   SLA           
Sbjct: 204 QDVVLVMALAFLDVSRDAMALDPPDFITGYEFVEEALKLLQEEGASSLAP-DLRAQIDET 262

Query: 255 XXXXAPACTLELLSMSNTPENIDRRRGAIAALRELLRQGLDVEASCQVQDWP--SFLSQA 312
                P   LELL +    +   +R   ++ +R +L       AS  V       F+++A
Sbjct: 263 LEEITPRYVLELLGLPLGDDYAAKRLNGLSGVRNILWSVGGGGASALVGGLTREKFMNEA 322

Query: 313 LGCLLANEIVDLLPWDSLAVMRKNKKTIESQNLRVIIDSSCFYRVFTAHLALGFSSKHKE 372
              + A E VDL               I +++  V       Y V  A +A  F  K   
Sbjct: 323 FLRMTAAEQVDLF--------VATPSNIPAESFEV-------YEVALALVAQAFIGKKPH 367

Query: 373 LIHKAKNICECL-----IASE------------GFDLKFEEAFCLFLLG--------LGT 407
           L+  A    + L     +A E              D   E   C  L+G        LG 
Sbjct: 368 LLQDADKQFQQLQQAKVMAMEIPAMLYDTRNNWEIDFGLERGLCALLIGKVDECRMWLGL 427

Query: 408 EAEAVEKLKQLELNSNPK-HNSVLGKAIMDASDANPS----LEMWLKDSVLDLYPDTKGC 462
           ++E  +         NP     VL  +  D +D  P     LE WL   V   + DTK  
Sbjct: 428 DSEDSQY-------RNPAIVEFVLENSNRDDNDDLPGLCKLLETWLAGVVFPRFRDTKDK 480

Query: 463 SPALASFFNAQKKISGSKNSKGATQTSSTICHRPLSSSGSVERRDFEEPRSYMSSSPNLG 522
              L  +++    +S         +    +   PL+++ ++ R   E  ++    +    
Sbjct: 481 KFKLGDYYDDPMVLS-------YLERVEVVQGSPLAAAAAMARIGAEHVKASAMQALQKV 533

Query: 523 FAVK-----QLAPTDLQSSLLS----GKN-----ENGPNLSESPVKVKRSLGTHHNGVWD 568
           F  +        P D+Q ++ S    G N     E G  ++E+ V+   +  T+   +  
Sbjct: 534 FPSRYTDRNSAEPKDVQETVFSVDPVGNNVGRDGEPGVFIAEA-VRPSENFETNDYAI-R 591

Query: 569 SHFTGAHIFERITHFTVLGCIAFATIKLL--GINISKNFTGSNWAFTKANHNIAWTADSS 626
           +  + + + E     +V   +  A++K+L  G+ I      S   F K++ +        
Sbjct: 592 AGVSESSVDETTVEMSVADMLKEASVKILAAGVAIGLISLFSQKYFLKSSSS-------- 643

Query: 627 SNYPVGPYMRRSTISDKLERILSRVKIHFLHRSDAGFRSDLHTAHSSSSFSIKVYRRQMP 686
                  + R+  +S                       SD+ T  S  +   +   R M 
Sbjct: 644 -------FQRKDMVS--------------------SMESDVATIGSVRADDSEALPR-MD 675

Query: 687 VEEAETLIRQWQEIKAEALGPSHEVNSLAEVLDEPMLAQWQALADAAKEKSCHWRFLLLK 746
              AE ++ +WQ+IK+ A GP H +  L EVLD  ML  W   A    +    + + LLK
Sbjct: 676 ARTAENIVSKWQKIKSLAFGPDHRIEMLPEVLDGRMLKIWTDRAAETAQLGLVYDYTLLK 735

Query: 747 LSVLRADILSDGNETDMXXXXXXXXXXXXXVDSSQQKNPNYLSTYKVRYVLKMQDDGSWK 806
           LSV    + +DG    +             V    + N   + TY  RY +     G WK
Sbjct: 736 LSVDSVTVSADGTRALVEATLEESACLSDLV--HPENNATDVRTYTTRYEVFWSKSG-WK 792

Query: 807 FCEGDI 812
             EG +
Sbjct: 793 ITEGSV 798