Miyakogusa Predicted Gene

Lj2g3v0609650.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0609650.1 tr|Q00W99|Q00W99_OSTTA ROOT HAIRLESS 1 (ISS)
(Fragment) OS=Ostreococcus tauri GN=Ot14g01130 PE=4
SV=,40.91,1e-16,seg,NULL,CUFF.34813.1
         (441 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48380.1 | Symbols: RHL1, HYP7 | root hair initiation protein...   280   2e-75
AT1G48380.2 | Symbols: RHL1, HYP7 | root hair initiation protein...   263   2e-70

>AT1G48380.1 | Symbols: RHL1, HYP7 | root hair initiation protein
           root hairless 1 (RHL1) | chr1:17877637-17879203 REVERSE
           LENGTH=355
          Length = 355

 Score =  280 bits (715), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 166/363 (45%), Positives = 210/363 (57%), Gaps = 42/363 (11%)

Query: 25  EVTERNRLKSFAFSNNILSETPARSSIHLNPSSIVAKHHGKDIIKKSHRKSSRFLFSFPG 84
           E  +R RLK+ A  N +LS++PA+S   L PS  V KHHG DII+KS RK+ RFLFSFPG
Sbjct: 21  ESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHGTDIIRKSQRKN-RFLFSFPG 79

Query: 85  LFAPVAGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTIVYPKNRYLTLQFSRGGKSVMCE 144
           L AP++   IGDL  L TKNP+LYL+FPQGRMKLFGTI+YPKNRYLTLQFSRGGK+V+C+
Sbjct: 80  LLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYPKNRYLTLQFSRGGKNVLCD 139

Query: 145 DFFDNMIVFSDAWWIGRKDENPEEARLEFPKELYEGQQAEYDFKXXXXXXXXSVVNQGVT 204
           D+FDNMIVFS++WWIG K+ENPEEARL+FPKEL + +  E+DF+        SV      
Sbjct: 140 DYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQAENTEFDFQ-GGAGGAASVKKLASP 198

Query: 205 RTRVQPAEEDSPETPIEDDLSEESE-----------INLKDTKELVPVRHSARTATKSYK 253
               QP E DSPE   ED LSE+ E           + L    ++ PVR S R + K + 
Sbjct: 199 EIGSQPTETDSPEVDNEDVLSEDGEFLDDKIQVTPPVQLTPPVQVTPVRQSQRNSGKKFN 258

Query: 254 FA-XXXXXXXXXXXXXLSEHEEK--VEVDTSANGHNTAKIETVVXXXXXXXXXXXXQLPT 310
           FA               S+ +EK  +E ++S      ++    +            +LP 
Sbjct: 259 FAETSSEASSGESEGNTSDEDEKPLLEPESSTRSREESQDGNGI-------TASASKLPE 311

Query: 311 ENKECASESKRKKVYQSASGTATTEVVSSTRGSLVQATISTLFKKVEEKKAPRDSKKSLS 370
           E       +KR+K             + S    LVQAT+S LFKK EEK A     KS S
Sbjct: 312 E-----LPAKREK-------------LKSKDSKLVQATLSNLFKKAEEKTAGTSKAKS-S 352

Query: 371 SKA 373
           SKA
Sbjct: 353 SKA 355


>AT1G48380.2 | Symbols: RHL1, HYP7 | root hair initiation protein
           root hairless 1 (RHL1) | chr1:17877637-17879203 REVERSE
           LENGTH=386
          Length = 386

 Score =  263 bits (672), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 167/394 (42%), Positives = 209/394 (53%), Gaps = 73/394 (18%)

Query: 25  EVTERNRLKSFAFSNNILSETPARSSIHLNPSSIVAKHHGKDIIKKSHRKSSRFLFSFPG 84
           E  +R RLK+ A  N +LS++PA+S   L PS  V KHHG DII+KS RK+ RFLFSFPG
Sbjct: 21  ESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHGTDIIRKSQRKN-RFLFSFPG 79

Query: 85  LFAPVAGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTIVYPKNRYLTLQFSRGGKSVMCE 144
           L AP++   IGDL  L TKNP+LYL+FPQGRMKLFGTI+YPKNRYLTLQFSRGGK+V+C+
Sbjct: 80  LLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYPKNRYLTLQFSRGGKNVLCD 139

Query: 145 DFFDNMIVFSDAWWIGRKDENPEEARLEFPKEL--------------------------- 177
           D+FDNMIVFS++WWIG K+ENPEEARL+FPKEL                           
Sbjct: 140 DYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQVDTFHLFLHFLFKTMVATEMFNMIR 199

Query: 178 ----YEGQQAEYDFKXXXXXXXXSVVNQGVTRTRVQPAEEDSPETPIEDDLSEESE---- 229
               ++ +  E+DF+        SV          QP E DSPE   ED LSE+ E    
Sbjct: 200 RILWFQAENTEFDFQ-GGAGGAASVKKLASPEIGSQPTETDSPEVDNEDVLSEDGEFLDD 258

Query: 230 -------INLKDTKELVPVRHSARTATKSYKFA-XXXXXXXXXXXXXLSEHEEK--VEVD 279
                  + L    ++ PVR S R + K + FA               S+ +EK  +E +
Sbjct: 259 KIQVTPPVQLTPPVQVTPVRQSQRNSGKKFNFAETSSEASSGESEGNTSDEDEKPLLEPE 318

Query: 280 TSANGHNTAKIETVVXXXXXXXXXXXXQLPTENKECASESKRKKVYQSASGTATTEVVSS 339
           +S      ++                      N   AS SK  +        A  E + S
Sbjct: 319 SSTRSREESQ--------------------DGNGITASASKLPEEL-----PAKREKLKS 353

Query: 340 TRGSLVQATISTLFKKVEEKKAPRDSKKSLSSKA 373
               LVQAT+S LFKK EEK A     KS SSKA
Sbjct: 354 KDSKLVQATLSNLFKKAEEKTAGTSKAKS-SSKA 386