Miyakogusa Predicted Gene

Lj2g3v0593010.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0593010.2 tr|B7FII7|B7FII7_MEDTR Riboflavin kinase
OS=Medicago truncatula GN=MTR_4g091060 PE=2 SV=1,86.4,0,seg,NULL;
Flavokinase,Riboflavin kinase domain, bacterial/eukaryotic;
HAD_2,NULL; no description,HAD,CUFF.34769.2
         (373 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21470.1 | Symbols: ATFMN/FHY, FMN/FHY | riboflavin kinase/FM...   550   e-157
AT4G25840.1 | Symbols: GPP1 | glycerol-3-phosphatase 1 | chr4:13...   120   2e-27
AT5G57440.1 | Symbols: GS1, GPP2 | Haloacid dehalogenase-like hy...   120   2e-27
AT1G56500.1 | Symbols:  | haloacid dehalogenase-like hydrolase f...    70   2e-12
AT4G11570.2 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    65   9e-11
AT4G11570.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    65   9e-11
AT2G38740.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    64   1e-10
AT3G48420.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    60   3e-09
AT4G39970.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    59   7e-09

>AT4G21470.1 | Symbols: ATFMN/FHY, FMN/FHY | riboflavin kinase/FMN
           hydrolase | chr4:11431284-11433197 FORWARD LENGTH=379
          Length = 379

 Score =  550 bits (1416), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 262/353 (74%), Positives = 298/353 (84%)

Query: 20  MSIAKPFRKWISCVIXXXXXXXXXXXXVVGNVLKFSLGKYGKEWDGREVLKIVGKTPFEA 79
           MS++   +K  SCV+            VVG++L+  L KYGK+WDGRE LKIVGKTP EA
Sbjct: 1   MSMSNSLKKLSSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEA 60

Query: 80  AAAVVEDYGLPCSTTEFISEISPLFSDQWCNIKALPGANRLIKHLKSHGAPMALASNSPR 139
           A  +VEDY LPC   EF SE  PLFS Q   IK+LPGANRLI+HLK HG P+ALASNS R
Sbjct: 61  ATTIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSR 120

Query: 140 ENIEAKISFHDGWKDSFSVIIGGDEVRKGKPSPEIFVEAARRLSIEPSCCLVIEDSIPGV 199
            NIE+KIS+H+GWK+ FSVI+G DEV KGKPSP+IF+EAA+RL  +P+ CLVIEDS+PGV
Sbjct: 121 ANIESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGV 180

Query: 200 TAGKAAGMEVVAVPSLPKQSHLYTAADEVINSLLDLQLEKWGLPPFEDWVEGTLPIDPWH 259
            AGKAAG +V+AVPSLPKQ+HLYT+ADEVINSLLD++LEKWGLPPF+DW+E TLPIDPWH
Sbjct: 181 MAGKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQDWIENTLPIDPWH 240

Query: 260 ISGPVIKGFGRGSKVLGIPTANLSAKGYSDLLVEHPAGVYFGWAGLPGRGIFKMVMSIGW 319
           I GPVIKGFGRGSKVLGIPTANLS K Y+D LVEHP+GVYFGWAGL  RG+FKMVMSIGW
Sbjct: 241 IGGPVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGW 300

Query: 320 NPYFNNKEKTIEPWLLHDFSEDFYGEELRLVIVGYIRPEANFPSLESLIAKIH 372
           NPYFNNKEKTIEPWLLHDF+EDFYGEELRL+IVGYIRPEANF SLESLIAKIH
Sbjct: 301 NPYFNNKEKTIEPWLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAKIH 353


>AT4G25840.1 | Symbols: GPP1 | glycerol-3-phosphatase 1 |
           chr4:13139026-13140719 FORWARD LENGTH=298
          Length = 298

 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 16/260 (6%)

Query: 4   PSLLVPKALYF---------GLSDNMSIAKPFRKWISCVIXXXXXXXXXXXXVVGNVLKF 54
           P + VP +L F          ++  +++    R  I+ VI                V + 
Sbjct: 36  PVIRVPASLRFVATMSTPAAAVNATVTVTDAGRGSITHVIFDMDGLLLDTEKFYTEVQEK 95

Query: 55  SLGKYGKEWDGREVLKIVGKTPFEAAAAVVEDYGLP--CSTTEFISEISPLFSDQWCNIK 112
            L +Y K +D     K++G+   EAA   V++ G+    S  +FI E   +  D +    
Sbjct: 96  ILARYNKTFDWSLKAKMMGRKAIEAARLFVDESGISDSLSAEDFIVERESMLQDLFPTSD 155

Query: 113 ALPGANRLIKHLKSHGAPMALASNSPRENIEAKISFHDGWKDSFSVIIGGD--EVRKGKP 170
            +PGA+RL++HL   G P+ +A+ +   + + K   H         ++ GD  EV++GKP
Sbjct: 156 LMPGASRLLRHLHGKGIPICIATGTHTRHFDLKTQRHRELFSLMHHVVRGDDPEVKEGKP 215

Query: 171 SPEIFVEAARRLS---IEPSCCLVIEDSIPGVTAGKAAGMEVVAVPSLPKQSHLYTAADE 227
           +P+ F+ A+RR     ++P   LV ED+  GV A K AGM V+ VP           AD+
Sbjct: 216 APDGFLAASRRFEDGPVDPRKVLVFEDAPSGVQAAKNAGMNVIMVPDSRLDKSYCNVADQ 275

Query: 228 VINSLLDLQLEKWGLPPFED 247
           V+ SLLD + E+WGLP F+D
Sbjct: 276 VLASLLDFKPEEWGLPSFQD 295


>AT5G57440.1 | Symbols: GS1, GPP2 | Haloacid dehalogenase-like
           hydrolase (HAD) superfamily protein |
           chr5:23271518-23272900 REVERSE LENGTH=240
          Length = 240

 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 110/204 (53%), Gaps = 7/204 (3%)

Query: 51  VLKFSLGKYGKEWDGREVLKIVGKTPFEAAAAVVEDYGLP--CSTTEFISEISPLFSDQW 108
           V +  L ++ K++D     K++G+   EAA   VE+ G+    S  +F+ E   +  D +
Sbjct: 35  VQEIILARFNKKFDWSLKAKMMGRKAIEAARIFVEESGISDSLSAEDFLVERESMLQDLF 94

Query: 109 CNIKALPGANRLIKHLKSHGAPMALASNSPRENIEAKISFHDGWKDSFSVIIGGD--EVR 166
              + +PGA+RLIKHL     P+ +A+ +   + + K   H         ++ GD  EV+
Sbjct: 95  PTSELMPGASRLIKHLHVKNIPICIATGTHTRHYDLKTQRHRELFSLMHHVVRGDDPEVK 154

Query: 167 KGKPSPEIFVEAARRLS---IEPSCCLVIEDSIPGVTAGKAAGMEVVAVPSLPKQSHLYT 223
           +GKP+P+ F+ AARR     ++    LV ED+  GV A K AGM VV VP          
Sbjct: 155 QGKPAPDGFLAAARRFKDGPVDSQKVLVFEDAPSGVLAAKNAGMNVVMVPDPRLDISHQD 214

Query: 224 AADEVINSLLDLQLEKWGLPPFED 247
            AD++I SL+D + E+WGLPPFED
Sbjct: 215 VADQIITSLVDFKPEEWGLPPFED 238


>AT1G56500.1 | Symbols:  | haloacid dehalogenase-like hydrolase
           family protein | chr1:21159775-21167092 FORWARD
           LENGTH=1055
          Length = 1055

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 63/116 (54%)

Query: 114 LPGANRLIKHLKSHGAPMALASNSPRENIEAKISFHDGWKDSFSVIIGGDEVRKGKPSPE 173
            PGA  L+   K+ G  +A+AS++ R  ++A +         F  I+  D     KP+P+
Sbjct: 162 FPGALELVTECKNKGLKVAVASSADRIKVDANLKAAGLSLTMFDAIVSADAFENLKPAPD 221

Query: 174 IFVEAARRLSIEPSCCLVIEDSIPGVTAGKAAGMEVVAVPSLPKQSHLYTAADEVI 229
           IF+ AA+ L +  S C+VIED++ GV A +AA M  +AV +   ++ L  A   +I
Sbjct: 222 IFLAAAKILGVPTSECVVIEDALAGVQAAQAANMRCIAVKTTLSEAILKDAGPSMI 277


>AT4G11570.2 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr4:7004743-7005864 FORWARD
           LENGTH=373
          Length = 373

 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 1/99 (1%)

Query: 116 GANRLIKHLKSHGAPMALASNSPRENIEAKISFHDGWKDSFSVIIGGDEVRKGKPSPEIF 175
           G+   +  L ++  PMAL S  PRE +E  +    G +  FSVI+  ++V +GKP PE+F
Sbjct: 216 GSQEFVNVLMNNKIPMALVSTRPRETLENAVG-SIGIRKFFSVIVASEDVYRGKPDPEMF 274

Query: 176 VEAARRLSIEPSCCLVIEDSIPGVTAGKAAGMEVVAVPS 214
           + AA+ L   P  C+V  +S   + A     M+ VAV S
Sbjct: 275 IYAAQLLDFIPERCIVFGNSNQTIEAAHDGRMKCVAVAS 313


>AT4G11570.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr4:7004743-7005864 FORWARD
           LENGTH=373
          Length = 373

 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 1/99 (1%)

Query: 116 GANRLIKHLKSHGAPMALASNSPRENIEAKISFHDGWKDSFSVIIGGDEVRKGKPSPEIF 175
           G+   +  L ++  PMAL S  PRE +E  +    G +  FSVI+  ++V +GKP PE+F
Sbjct: 216 GSQEFVNVLMNNKIPMALVSTRPRETLENAVG-SIGIRKFFSVIVASEDVYRGKPDPEMF 274

Query: 176 VEAARRLSIEPSCCLVIEDSIPGVTAGKAAGMEVVAVPS 214
           + AA+ L   P  C+V  +S   + A     M+ VAV S
Sbjct: 275 IYAAQLLDFIPERCIVFGNSNQTIEAAHDGRMKCVAVAS 313


>AT2G38740.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr2:16194639-16195995
           REVERSE LENGTH=244
          Length = 244

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 111 IKALPGANRLIKHLKSHGAPMALASNSPRENIEAKISFHDGWKDSFSVIIGGDEVRKGKP 170
           IK L G  +L K ++  G   A  +N+P+EN E  IS   G  D F  +I G E    KP
Sbjct: 107 IKPLDGLIKLTKWIEDRGLKRAAVTNAPKENAELMIS-KLGLTDFFQAVILGSECEFPKP 165

Query: 171 SPEIFVEAARRLSIEPSCCLVIEDSIPGVTAGKAAGMEVVAVPS 214
            P  +++A   L++     LV EDSI G+ AG AAGM V+ + +
Sbjct: 166 HPGPYLKALEVLNVSKEHTLVFEDSISGIKAGVAAGMPVIGLTT 209


>AT3G48420.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr3:17929743-17931551
           FORWARD LENGTH=319
          Length = 319

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 1/129 (0%)

Query: 115 PGANRLIKHLKSHGAPMALASNSPRENIEAKISFHDGWKDSFSV-IIGGDEVRKGKPSPE 173
           PG  +L+    ++G  +A+ S S  + + A +S   G + +  + I  GD V K KP P 
Sbjct: 178 PGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIKIFAGDVVPKKKPDPA 237

Query: 174 IFVEAARRLSIEPSCCLVIEDSIPGVTAGKAAGMEVVAVPSLPKQSHLYTAADEVINSLL 233
           I+  AA  L ++PS C+V+EDS  G+ A KAAGM  +   S       +  AD V + + 
Sbjct: 238 IYNLAAETLGVDPSKCVVVEDSAIGLAAAKAAGMTCIVTKSGYTADEDFENADAVFDCIG 297

Query: 234 DLQLEKWGL 242
           D   E++ L
Sbjct: 298 DPPEERFDL 306


>AT4G39970.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr4:18536678-18538429
           REVERSE LENGTH=316
          Length = 316

 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 110 NIKALPGANRLIKHLKSHGAPMALASNSPRENI----EAKISFHDGWKDSFSVIIGGDEV 165
           +++  PG  RL+   K+ G  +A+ S + + ++    E  I             + GD+V
Sbjct: 173 SVEPRPGVIRLMDEAKAAGKKLAVCSAATKSSVILCLENLIDIERF--QGLDCFLAGDDV 230

Query: 166 RKGKPSPEIFVEAARRLSIEPSCCLVIEDSIPGVTAGKAAGMEVVAVPSLPKQSHLYTAA 225
           ++ KP P I++ AA +L +    CLV+EDS+ G+ A   AGM  V   +       +  A
Sbjct: 231 KEKKPDPSIYITAAEKLGVSVKDCLVVEDSVIGLQAATKAGMSCVITYTSSTSDQNFNDA 290

Query: 226 DEVINSLLDLQLE 238
             V   L +++L+
Sbjct: 291 IAVYPDLSNVKLK 303