Miyakogusa Predicted Gene
- Lj2g3v0571450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0571450.1 tr|G7I4M0|G7I4M0_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_1g042650 PE=4 SV=1,37.86,3e-19,domain in
FBox and BRCT domain containing pl,FBD; FAMILY NOT NAMED,NULL;
FBD,FBD,CUFF.34771.1
(137 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54910.3 | Symbols: | RNI-like superfamily protein | chr3:20... 63 5e-11
AT3G54910.2 | Symbols: | RNI-like superfamily protein | chr3:20... 63 5e-11
AT3G54910.1 | Symbols: | RNI-like superfamily protein | chr3:20... 63 5e-11
AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 62 1e-10
AT5G62970.1 | Symbols: | Protein with RNI-like/FBD-like domains... 59 8e-10
AT5G38580.1 | Symbols: | FBD-like domain family protein | chr5:... 59 1e-09
AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 3e-09
AT3G26920.2 | Symbols: | FBD / Leucine Rich Repeat domains cont... 56 6e-09
AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 56 6e-09
AT3G26920.1 | Symbols: | FBD / Leucine Rich Repeat domains cont... 56 6e-09
AT3G49030.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 56 6e-09
AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 56 8e-09
AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 56 8e-09
AT3G52690.1 | Symbols: | RNI-like superfamily protein | chr3:19... 52 1e-07
AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 52 1e-07
AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 2e-07
AT1G55030.1 | Symbols: | RNI-like superfamily protein | chr1:20... 52 2e-07
AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 2e-07
AT3G26930.1 | Symbols: | Protein with RNI-like/FBD-like domains... 51 2e-07
AT3G49480.1 | Symbols: | Protein with RNI-like/FBD-like domains... 50 3e-07
AT3G51530.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-07
AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 5e-07
AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 5e-07
AT3G52670.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 50 5e-07
AT4G10420.1 | Symbols: | FBD / Leucine Rich Repeat domains cont... 49 7e-07
AT5G56570.1 | Symbols: | Leucine-rich repeat (LRR) family prote... 49 8e-07
AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 8e-07
AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 9e-07
AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 9e-07
AT5G38565.1 | Symbols: | F-box/FBD-like domains containing prot... 49 1e-06
AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 2e-06
AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 2e-06
AT3G49020.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 48 2e-06
AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 47 4e-06
AT4G13965.1 | Symbols: | Protein with RNI-like/FBD-like domains... 46 9e-06
>AT3G54910.3 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
+F+ L H+KL ++ +V LLK LQ L + + D H + ++ W P
Sbjct: 246 VFNQLKHLKLCRCK-GHSSDLLVRLLKDSSNLQALDLSEMDYHEN------HDILYWHQP 298
Query: 61 PCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLK 120
VPEC+LL L+ L+ + GT E + A Y ++ A L+ TI + + ++ + ++LK
Sbjct: 299 STVPECMLLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKSCVFDDE--RFDMLK 356
Query: 121 KFYLCTRGSATCKFTF 136
+ L +R S TC+ F
Sbjct: 357 ELALSSRASTTCQLVF 372
>AT3G54910.2 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
+F+ L H+KL ++ +V LLK LQ L + + D H + ++ W P
Sbjct: 246 VFNQLKHLKLCRCK-GHSSDLLVRLLKDSSNLQALDLSEMDYHEN------HDILYWHQP 298
Query: 61 PCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLK 120
VPEC+LL L+ L+ + GT E + A Y ++ A L+ TI + + ++ + ++LK
Sbjct: 299 STVPECMLLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKSCVFDDE--RFDMLK 356
Query: 121 KFYLCTRGSATCKFTF 136
+ L +R S TC+ F
Sbjct: 357 ELALSSRASTTCQLVF 372
>AT3G54910.1 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
+F+ L H+KL ++ +V LLK LQ L + + D H + ++ W P
Sbjct: 246 VFNQLKHLKLCRCK-GHSSDLLVRLLKDSSNLQALDLSEMDYHEN------HDILYWHQP 298
Query: 61 PCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLK 120
VPEC+LL L+ L+ + GT E + A Y ++ A L+ TI + + ++ + ++LK
Sbjct: 299 STVPECMLLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKSCVFDDE--RFDMLK 356
Query: 121 KFYLCTRGSATCKFTF 136
+ L +R S TC+ F
Sbjct: 357 ELALSSRASTTCQLVF 372
>AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=443
Length = 443
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 19 WAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYPPCVPECILLHLKRCCLNG 78
W + +L+ PKLQ+L + G+D W P CVPEC+L HL++ G
Sbjct: 325 WNLLSRMLESSPKLQILKLTGLSCIEKGLDGQN-----WNPPKCVPECLLFHLEKFLWTG 379
Query: 79 FIGTKG-EFEFARYIMQKARFLQRMTISTG-MD-KNQWGKLELLKKFYLCTRGSATCKFT 135
+ +G E E A YI++ AR L++ T ST +D +N + E+L + R S +C
Sbjct: 380 YEWQRGDEKEVATYILENARLLKKATFSTKRIDLENLEKRREMLNELASVARASDSCHLV 439
Query: 136 F 136
F
Sbjct: 440 F 440
>AT5G62970.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr5:25272033-25273537 FORWARD LENGTH=449
Length = 449
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVE-LLKYCPKLQVLVIDQP---DVHFSGIDEFKEEVGV 56
+F+ L H+ + +N W+E++ LLK PKLQ L D+ D + F
Sbjct: 317 VFNELEHLN--FHIHNAYWSELLYWLLKASPKLQNLEFDEQCSRDGTMGTLAVF------ 368
Query: 57 WQYPPCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTIST--GMDKNQWG 114
W P VP+C+L L+ +G+ G+ + A YI++K+R L+ TIS G+D Q
Sbjct: 369 WNQPNSVPQCLLSTLQTFEWSGYPGSVQGKDLATYILRKSRQLKIATISIGYGLDPQQKL 428
Query: 115 KLELLKKFYLCTRGSATCKFTF 136
K+E+ KF R S TCK F
Sbjct: 429 KMEMDVKFSF--RASPTCKRVF 448
>AT5G38580.1 | Symbols: | FBD-like domain family protein |
chr5:15451164-15451842 REVERSE LENGTH=168
Length = 168
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 24 ELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYPPCVPECILLHLKRCCLNGFIGTK 83
+LLK P L++L I H G DE V W P VPEC+L L+ + + G +
Sbjct: 54 QLLKDSPNLRILDISVVKDH--GTDERNGMVS-WNQPNFVPECLLSSLQTLLWSRYFGRQ 110
Query: 84 GEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLKKFYLCTRGSATCKFTF 136
+ + A YI++ A L+ TI D++ L+++K+ L R S C+ F
Sbjct: 111 QDRDIAVYILKNACHLKTATILADTDEHDVPNLQMIKELALSLRTSVICQLVF 163
>AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15449279-15450601 REVERSE LENGTH=379
Length = 379
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
+F++L H+KL ++++ + +LLK P LQVL I + + ++ W P
Sbjct: 250 IFNHLEHLKLCMCPFDSS-NLLGQLLKGSPNLQVLDI---------FEMKRNDIVCWNQP 299
Query: 61 PCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLK 120
V EC+L LK + + G + + A YI++ A L+ T T N +L+++K
Sbjct: 300 SSVLECLLSSLKILNWSAYFGRPQDRDIAVYILKNACHLKTATFLTDKRINDVRRLKMIK 359
Query: 121 KFYLCTRGSATCKFTF 136
+ L R S+TC+ F
Sbjct: 360 ELRLSPRASSTCQLVF 375
>AT3G26920.2 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr3:9921241-9922429 FORWARD
LENGTH=301
Length = 301
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 2 FHNLTHIKLVYSNYNNNWAEVVEL-LKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
F++LT+++L S Y W ++ L L P LQVL I F E + W P
Sbjct: 172 FYHLTYLEL--STYKPKWWNLLTLMLDTSPNLQVLKI----FDFMTSQE-QRPWEKWNEP 224
Query: 61 PCVPECILLHLKRCCLNGFIGT-KGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELL 119
VPEC+LLHL+ + G + E E A+YI++ AR L++ T S ++ N ++E++
Sbjct: 225 KNVPECLLLHLETFVWTCYEGKLENEIELAKYILRNARRLKKATFSI-IEINPDKRVEMV 283
Query: 120 KKFYLCTRGSATCKFTF 136
+ R S +C+ F
Sbjct: 284 GELKSVVRASNSCQLVF 300
>AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:63465-65365 FORWARD
LENGTH=453
Length = 453
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHF--SGIDEFKEEVGVWQ 58
+F+ L +++ Y+ + W + +L++ PKLQVL + V F +G+ G W
Sbjct: 304 IFYQLVSLEM-YTREIDWWDLLTLMLEHSPKLQVLKLTDNCVKFHKNGLPG-----GKWN 357
Query: 59 YPPCVPECILLHLKRCCLNGFI-GTKGEFEFARYIMQKARFLQRMTISTG-MDKNQWGKL 116
P VPEC+L HL+ F G + E E A YI++ AR L + T ST ++ + KL
Sbjct: 358 EPKYVPECLLSHLETFVWRRFDWGREEEKEIATYILKNARRLNKATFSTNPVNSEELDKL 417
Query: 117 ELLKKFYL----CTRGSATCKFTF 136
+ +K + R S +C+F F
Sbjct: 418 KERRKVHNELDGVVRASNSCQFVF 441
>AT3G26920.1 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr3:9921241-9922429 FORWARD
LENGTH=340
Length = 340
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 2 FHNLTHIKLVYSNYNNNWAEVVEL-LKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
F++LT+++L S Y W ++ L L P LQVL I F E + W P
Sbjct: 211 FYHLTYLEL--STYKPKWWNLLTLMLDTSPNLQVLKI----FDFMTSQE-QRPWEKWNEP 263
Query: 61 PCVPECILLHLKRCCLNGFIGT-KGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELL 119
VPEC+LLHL+ + G + E E A+YI++ AR L++ T S ++ N ++E++
Sbjct: 264 KNVPECLLLHLETFVWTCYEGKLENEIELAKYILRNARRLKKATFSI-IEINPDKRVEMV 322
Query: 120 KKFYLCTRGSATCKFTF 136
+ R S +C+ F
Sbjct: 323 GELKSVVRASNSCQLVF 339
>AT3G49030.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=417
Length = 417
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 57 WQYPPCVPECILLHLKRCCLNGFIGTKG-EFEFARYIMQKARFLQRMTISTG-MD-KNQW 113
W P CVPEC+L HL++ G+ +G E E A YI++ AR L++ T ST +D +N
Sbjct: 332 WNPPKCVPECLLFHLEKFLWTGYEWQRGDEKEVATYILENARLLKKATFSTKRIDLENLE 391
Query: 114 GKLELLKKFYLCTRGSATCKFTF 136
+ E+L + R S +C F
Sbjct: 392 KRREMLNELASVARASDSCHLVF 414
>AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 76/140 (54%), Gaps = 16/140 (11%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKL-QVLVIDQPDVHFSGIDEFKEEVGV--W 57
+F++L + L ++ Y++N +V LK P L +++++ + D H E +G+ W
Sbjct: 283 IFNHLEELTL-WNKYSSNL--LVWFLKNSPNLRELMLVSETDDH--------ENLGMLSW 331
Query: 58 QYPPCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLE 117
P VPEC+L L++ ++G + + A YI++ A L+ TI + D + KLE
Sbjct: 332 NQPSIVPECMLSSLQKFTWFKYLGRPQDRDIAVYILKNACRLRTATIKS--DTRLFTKLE 389
Query: 118 LLKKFYLCTRGSATCKFTFS 137
++ + L ++ S+TC+ FS
Sbjct: 390 MITELRLSSQASSTCELNFS 409
>AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 76/140 (54%), Gaps = 16/140 (11%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKL-QVLVIDQPDVHFSGIDEFKEEVGV--W 57
+F++L + L ++ Y++N +V LK P L +++++ + D H E +G+ W
Sbjct: 283 IFNHLEELTL-WNKYSSNL--LVWFLKNSPNLRELMLVSETDDH--------ENLGMLSW 331
Query: 58 QYPPCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLE 117
P VPEC+L L++ ++G + + A YI++ A L+ TI + D + KLE
Sbjct: 332 NQPSIVPECMLSSLQKFTWFKYLGRPQDRDIAVYILKNACRLRTATIKS--DTRLFTKLE 389
Query: 118 LLKKFYLCTRGSATCKFTFS 137
++ + L ++ S+TC+ FS
Sbjct: 390 MITELRLSSQASSTCELNFS 409
>AT3G52690.1 | Symbols: | RNI-like superfamily protein |
chr3:19530736-19531811 FORWARD LENGTH=299
Length = 299
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
+F+ L H++ +Y+ W + +L PKLQVL + ++ F + G W P
Sbjct: 160 IFYQLVHLE-IYTCKEEWWNLLKLMLDSSPKLQVLKLIGKNLDFKKVGMVG---GKWNEP 215
Query: 61 PCVPECILLHLKRCCLNGF-IGTKGEFEFARYIMQKARFLQRMTIST-GMDKNQWGKLE- 117
VPEC+L LK + ++ E E A YI++ AR L+ ++ ST + + KLE
Sbjct: 216 KNVPECLLSQLKMFVWTSYHWESEVEKEVATYILKNARQLKNVSFSTRPIHSKEHNKLEE 275
Query: 118 ---LLKKFYLCTRGSATCKFTF 136
+LK+ R S++C F
Sbjct: 276 KCKMLKELDGVVRASSSCHLVF 297
>AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:1447025-1448678
REVERSE LENGTH=448
Length = 448
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 19 WAEVVELLKYCPKLQVLVIDQPDVHF--SGIDEFKEEVGVWQYPPCVPECILLHLKRCCL 76
W + +L PKLQ+L + +H + DE K W P C PEC+L HL+
Sbjct: 325 WNLLSIMLDSSPKLQILKLTDVYLHDNKTNPDERK-----WNPPKCAPECLLFHLETFLW 379
Query: 77 NGFIGTKG-EFEFARYIMQKARFLQRMTIST---GMDKNQ--WGKLELLKKFYLCTRGSA 130
G+ +G E E A YI++ AR L++ T ST G +K + + E+L + + S
Sbjct: 380 IGYEWQRGDEKEVATYILENARRLKKATFSTKRIGREKLEDFEKRREMLNELAIVLWDSN 439
Query: 131 TCKFTF 136
+C F
Sbjct: 440 SCHLVF 445
>AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:11679230-11680679
FORWARD LENGTH=422
Length = 422
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVE-LLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQY 59
+FH L ++L W ++ +L+ PKL+ L + + V+ S + W
Sbjct: 293 VFHCL--VRLTICTCETEWLNLLMCVLRDSPKLRELKLVKNHVYRS-----HQPRPCWNE 345
Query: 60 PPCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTIST-GMDKNQWGKLEL 118
P VPEC+L L+ + GT+ E E A +I++ L+++TIS+ D N+ K E+
Sbjct: 346 PSAVPECLLTSLETLEWVKYEGTEEEKEVAAFILRSGSCLKKVTISSKSTDINK--KFEM 403
Query: 119 LKKFYLCTRGSATCKFTF 136
LK+ L R S TC+ F
Sbjct: 404 LKELSLLFRRSPTCQIAF 421
>AT1G55030.1 | Symbols: | RNI-like superfamily protein |
chr1:20530417-20531768 REVERSE LENGTH=422
Length = 422
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVL-VIDQPDVHFSGIDEFKEEVGVWQY 59
+F+ L +++ + +N + W + +L PKLQVL +ID D G++ + E G W
Sbjct: 292 IFNQLVYLE-ICTNKTSWWKLLPLMLHSSPKLQVLKLIDDTD----GMN-YVEASGEWNQ 345
Query: 60 PPCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTG--MDKNQWGKLE 117
P VPEC L HL++ G+ + E E A+YI++ L+R S +++ +E
Sbjct: 346 PKNVPEC-LHHLEKFIWEGYKWKREEIEVAKYILKNTNRLKRAIFSLKGISSEDRLVVVE 404
Query: 118 LLKKFYLCTRGSATCKFTF 136
LK + T S C+F F
Sbjct: 405 DLKSVVMATTNS--CQFQF 421
>AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13324130-13325559
FORWARD LENGTH=419
Length = 419
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVV-ELLKYCPKLQVL-VIDQPDVHFSGIDEFKEEVGVWQ 58
+F L H+ L S W +++ +L+ PKLQ L +ID+ H SG+ + +G W+
Sbjct: 287 IFSQLVHLNL--STVVKGWWDLLTSMLQDSPKLQSLKLIDKQ--HESGLCGIETPIG-WK 341
Query: 59 YPPCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTIS-TGMDKNQWGKLE 117
P VPEC+L L+ G+ G +G+ E A Y+++ A L+ S D + K
Sbjct: 342 LPSSVPECLLFSLEAFEWIGYKGRRGDREVATYVLKNAACLRTAKFSPESTDVGE--KYH 399
Query: 118 LLKKFYLCTRGSATCKFTF 136
+LK+ S + K F
Sbjct: 400 MLKELASVPTASTSSKLLF 418
>AT3G26930.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr3:9925931-9927351 FORWARD LENGTH=409
Length = 409
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
+F+ L ++L Y+N W +V +L PKLQVL ++ SG + + W P
Sbjct: 261 IFYQLVSLEL-YTNKAEWWNLLVLMLDSSPKLQVLKLNG---KLSGENNHLASMN-WDQP 315
Query: 61 PCVPECILLHLKRCCLNG--FIGTKGEFEFARYIMQKARFLQRMTISTGM-----DKNQW 113
+P C+L +L+ G IG + E E A+YI++ L+R T + + ++ +
Sbjct: 316 KNIPGCLLFNLETFIWKGCKRIG-EDEKEVAKYILRNTNRLKRATFTREIYEENNSQDMF 374
Query: 114 GKLELLKKFYLCTRGSATCKFTF 136
LE++++ R S +CK F
Sbjct: 375 ENLEMVEELESVVRASKSCKLVF 397
>AT3G49480.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr3:18342544-18343473 REVERSE LENGTH=309
Length = 309
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 29 CPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYPPCVPECILLHLKRCCLNGFIGTKGEFEF 88
C KL+V ++D S I + + +W P +P C+ HL+ +G++G + E +
Sbjct: 202 CSKLKVFLVD------SDIPRWNHDPALWNQPSSIPRCLSSHLEIFEWDGYVGREDEKKI 255
Query: 89 ARYIMQKARFLQRMTIS-----TGMDKNQWGKLELLKK 121
RYI++ +++L+ IS +G +K + +LE + +
Sbjct: 256 IRYILENSKYLKTAGISPNSTFSGEEKQKMEELESMHR 293
>AT3G51530.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19112873-19114497
REVERSE LENGTH=455
Length = 455
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVL-VIDQPDVHFS-GIDEFKEEVGVWQ 58
M+H L ++++ +++ W + +L PKLQVL +ID+ H + D+ ++ G W
Sbjct: 314 MYHQLVYLEM-HTHKVEWWNLLTHMLDSSPKLQVLKLIDRETRHENLEFDKKYKDQGKWN 372
Query: 59 YPPCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTIST 106
P VPEC+ + R C G + E E A YI++ AR L++ T ST
Sbjct: 373 QPKYVPECLETFMWRNC---NWGREEEKEVATYILRNARQLKKATFST 417
>AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQ--PDVHFSGIDEFKEEVGVWQ 58
MF+ L +++ Y+ W + +L+ PKLQVL + + H G+ G W
Sbjct: 307 MFYQLVSLEM-YTREAEWWNLLTLMLENSPKLQVLKLTDRSQNFHKDGLVS-----GKWN 360
Query: 59 YPPCVPECILLHLKRCCLNGFI-GTKGEFEFARYIMQKARFLQRMTISTG-MDKNQWGKL 116
P VPEC+L L+ F G + E E A YI++ R L++ T ST ++ + KL
Sbjct: 361 EPKDVPECLLSQLETFVWRRFDWGREEEKEIATYILKNGRRLKKATFSTNPIESEELNKL 420
Query: 117 ----ELLKKFYLCTRGSATCKFTF 136
++L R S +C+ F
Sbjct: 421 KERRKVLNGLDGVVRASNSCQLVF 444
>AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQ--PDVHFSGIDEFKEEVGVWQ 58
MF+ L +++ Y+ W + +L+ PKLQVL + + H G+ G W
Sbjct: 307 MFYQLVSLEM-YTREAEWWNLLTLMLENSPKLQVLKLTDRSQNFHKDGLVS-----GKWN 360
Query: 59 YPPCVPECILLHLKRCCLNGFI-GTKGEFEFARYIMQKARFLQRMTISTG-MDKNQWGKL 116
P VPEC+L L+ F G + E E A YI++ R L++ T ST ++ + KL
Sbjct: 361 EPKDVPECLLSQLETFVWRRFDWGREEEKEIATYILKNGRRLKKATFSTNPIESEELNKL 420
Query: 117 ----ELLKKFYLCTRGSATCKFTF 136
++L R S +C+ F
Sbjct: 421 KERRKVLNGLDGVVRASNSCQLVF 444
>AT3G52670.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr3:19525247-19526737 FORWARD LENGTH=384
Length = 384
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 19 WAEVVELLKYCPKLQVL-VIDQPDVHFSGIDEFKEEVGVWQYPPCVPECILLHLKRCCLN 77
W + +L PKLQVL +ID H + + W P VPEC+L HL+
Sbjct: 261 WNLLTVMLDSSPKLQVLKLID----HTQDVSKDNVVSEKWNEPKYVPECLLSHLETFVWI 316
Query: 78 GFIGTKGEF-EFARYIMQKARFLQRMTISTG-MDKNQWGKLE----LLKKFYLCTRGSAT 131
+ + E E A YI++ AR+L++ TIST ++ KLE +L + R S +
Sbjct: 317 RYDWEREEEKEVATYILRNARWLKKGTISTNPIESKDLEKLEERRKMLNELDSVVRASNS 376
Query: 132 CKFTF 136
C F
Sbjct: 377 CNLVF 381
>AT4G10420.1 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr4:6453085-6454209 REVERSE
LENGTH=322
Length = 322
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 24 ELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGV--WQYPPCVPECILLHLKRCCLNGFIG 81
+ LK P LQ L +FS +D+ E + + W P VPEC+L L++ + ++G
Sbjct: 215 QFLKDSPNLQELE------YFSELDDSYENMRMFPWNQPSIVPECLLSSLQKFTWSQYLG 268
Query: 82 TKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLKKFYLCTRGSATCKFTFS 137
+ + A YI++ A L+ TI + +L+++K+ +R S TC+ FS
Sbjct: 269 RTQDRDIAVYILKNACCLRNATIDSY--TCLVPELKMIKELTRSSRASTTCELNFS 322
>AT5G56570.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr5:22902736-22904404 FORWARD LENGTH=439
Length = 439
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 18/139 (12%)
Query: 2 FHNLTHIKLVYSNYNNNWAEVVE-LLKYCPKLQVLVI---DQPDVHFSGIDEFKEEVGVW 57
F NL H+KL + W ++ +L P L+ L + + DV+ VW
Sbjct: 314 FSNLVHLKLCTCSAG--WQNLLACMLNDAPNLRSLTLKLRQKSDVN---------PKKVW 362
Query: 58 QYPPCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLE 117
+ P VPEC+ L+ + GT+ E + YI+ A FLQR T ST D+NQ
Sbjct: 363 EKPTVVPECLSTRLEILKWRDYEGTEHEKDMVGYILANATFLQRATFSTK-DRNQCD--S 419
Query: 118 LLKKFYLCTRGSATCKFTF 136
+ R S C+F F
Sbjct: 420 RFSELQSMERVSEICEFVF 438
>AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18177676-18179339 FORWARD LENGTH=415
Length = 415
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 19 WAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYPPCVPECILLHLKRCCLNG 78
W + +L+ PKLQ+L + ++ + ++ ++ W P CVPEC+L HL+ G
Sbjct: 292 WNLLTFMLEASPKLQILKLTDLNMSSTKGNQIGQK---WIQPKCVPECLLFHLETFVWTG 348
Query: 79 F-IGTKGEFEFARYIMQKARFLQRMTIST 106
+ + E E ARYI++ L++ T ST
Sbjct: 349 YEWQRRDEKEVARYILRNTTSLKKATFST 377
>AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
+F L H++L + W + L++ PKL+VL + Q + + W+
Sbjct: 293 IFSQLVHLELC-TCAPRWWDLLTRLIEDSPKLRVLKLRQKHIRRA-----PSPRASWK-Q 345
Query: 61 PCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLK 120
P +P+C+L HL+ + G++ + E A +I++ A L+ IS K E+LK
Sbjct: 346 PALPKCLLFHLETFKWELYEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEMLK 405
Query: 121 KFYLCTRGSATCKFTF 136
RGS+TC+ F
Sbjct: 406 DLSSSPRGSSTCELLF 421
>AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
+F L H++L + W + L++ PKL+VL + Q + + W+
Sbjct: 293 IFSQLVHLELC-TCAPRWWDLLTRLIEDSPKLRVLKLRQKHIRRA-----PSPRASWK-Q 345
Query: 61 PCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLK 120
P +P+C+L HL+ + G++ + E A +I++ A L+ IS K E+LK
Sbjct: 346 PALPKCLLFHLETFKWELYEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEMLK 405
Query: 121 KFYLCTRGSATCKFTF 136
RGS+TC+ F
Sbjct: 406 DLSSSPRGSSTCELLF 421
>AT5G38565.1 | Symbols: | F-box/FBD-like domains containing protein
| chr5:15444571-15446009 REVERSE LENGTH=349
Length = 349
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
+ ++T +K + + + +LLK P L+VL I + H + V W P
Sbjct: 212 LIGSITSVKRLNHMFREKSKILGQLLKDSPNLRVLNIFKVQGHVT----LSTGVDCWNQP 267
Query: 61 PCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLK 120
VPEC+L L+ L+ + G + + +F YI++ A L+ TI ++ LK
Sbjct: 268 ISVPECLLESLQIFNLSHYFGKQQDLDFVVYILKNACHLKTATILADEPEHLVPN---LK 324
Query: 121 KFYLCTRGSATCKFTF 136
+ L R S+TC+ +
Sbjct: 325 ELTLSPRASSTCQLSI 340
>AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
+FH L H++ + + W ++ +LK+ PKL+ L +++ H I + + W+ P
Sbjct: 281 IFHQLEHLE--FCSCCTEWDILMFMLKHSPKLRSLKLNE--THGYTIVSQSDPMFHWEEP 336
Query: 61 PCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTG--------MDKNQ 112
VPE ++ L+ + G K E E A ++++ +R L+ T S +
Sbjct: 337 SSVPETLMFVLETLEWRNYRGLKMENELASFLLKHSRRLKIATFSPADCKQVRIELRTTV 396
Query: 113 WGKLELLKKFYLCTRGSATCKFTF 136
K +L + RGSA C+ F
Sbjct: 397 GMKYRILMELARLPRGSAECELVF 420
>AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
+FH L H++ + + W ++ +LK+ PKL+ L +++ H I + + W+ P
Sbjct: 281 IFHQLEHLE--FCSCCTEWDILMFMLKHSPKLRSLKLNE--THGYTIVSQSDPMFHWEEP 336
Query: 61 PCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTG--------MDKNQ 112
VPE ++ L+ + G K E E A ++++ +R L+ T S +
Sbjct: 337 SSVPETLMFVLETLEWRNYRGLKMENELASFLLKHSRRLKIATFSPADCKQVRIELRTTV 396
Query: 113 WGKLELLKKFYLCTRGSATCKFTF 136
K +L + RGSA C+ F
Sbjct: 397 GMKYRILMELARLPRGSAECELVF 420
>AT3G49020.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18169079-18170660
FORWARD LENGTH=447
Length = 447
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 26/150 (17%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGV---W 57
+F+ L ++L +Y W + +L PKLQ+L + P F KE+ V W
Sbjct: 307 IFYQLLSLELRAYSYEW-WNLLWFMLDSSPKLQILKLVDP-YQFP-----KEDCSVGWEW 359
Query: 58 QYPPCVPECILLHLKRCCLNGFIGTKGEFE------FARYIMQKARFLQRMTISTG-MDK 110
P CVPEC+L HL+ F+ T+ E++ A YI++ AR L++ T+ST +
Sbjct: 360 SRPKCVPECLLFHLE-----TFVWTRYEWQREDEKAVATYILKNARCLKKATLSTKPIGS 414
Query: 111 NQWGKL----ELLKKFYLCTRGSATCKFTF 136
+ KL E+L + S +C F
Sbjct: 415 EELEKLGKRREMLNELATQASPSNSCNLVF 444
>AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22976334-22977838
FORWARD LENGTH=435
Length = 435
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 28/150 (18%)
Query: 1 MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVL---------VIDQPDVHFSGIDEFK 51
+FH L +++L + + N ++ LLK+ P LQ L + DQP++
Sbjct: 290 IFHQLLYLEL-HLHKRLNGDRILSLLKHSPNLQTLKLNEKPLRSIKDQPNISV------- 341
Query: 52 EEVGVWQYPPCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTI-----ST 106
+ P VPEC+ HL+ G+ G + E A YI+ A L TI S+
Sbjct: 342 ------RKPNSVPECLTFHLETLEWQGYAGRPEDKEIAVYILGNALRLNTATISRYFSSS 395
Query: 107 GMDKNQWGKLELLKKFYLCTRGSATCKFTF 136
+Q L+++++ T+ S +C+
Sbjct: 396 RFRHHQKKDLKIVEELKSITKASTSCQLVL 425
>AT4G13965.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr4:8066138-8067435 REVERSE LENGTH=376
Length = 376
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 9 KLVYSNYNNNWAEVVELLKY----CPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYPPCVP 64
+LVY + AE + LL PKLQ+L + P K+ VG W P VP
Sbjct: 248 QLVYLELLTHEAECLNLLTLMLNSSPKLQILKLLSPKYQ----SWKKDVVGKWNKPKIVP 303
Query: 65 ECILLHLKRCCLNGFIGTKG-EFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLKKFY 123
EC+L HL+ G+ + E E A+YI+ L+R T + ++ +++++K
Sbjct: 304 ECLLFHLETFMWKGYEWKRNDETEVAKYILSNTNRLKRATFFSKPISSE-ERVKMVKNLN 362
Query: 124 LCTRGSATCKF 134
R +C+
Sbjct: 363 SVVRALNSCQL 373