Miyakogusa Predicted Gene
- Lj2g3v0571350.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0571350.2 tr|F5CAE0|F5CAE0_FUNHY Pentatricopeptide repeat
protein 78 (Fragment) OS=Funaria hygrometrica PE=2 S,24.17,3e-18,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.34734.2
(620 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 697 0.0
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 431 e-120
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 425 e-119
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 421 e-117
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 420 e-117
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 420 e-117
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 419 e-117
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 417 e-116
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 414 e-115
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 407 e-113
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 405 e-113
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-113
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-112
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 403 e-112
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 402 e-112
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 402 e-112
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 401 e-112
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 400 e-111
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-111
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-110
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 396 e-110
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 391 e-109
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 388 e-108
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-108
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-107
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 383 e-106
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-106
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 380 e-105
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 377 e-104
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 375 e-104
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 374 e-103
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 373 e-103
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 373 e-103
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 371 e-103
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 368 e-102
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 362 e-100
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 362 e-100
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 1e-99
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 5e-99
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 357 1e-98
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 1e-98
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 3e-98
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 3e-98
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 352 3e-97
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 4e-97
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 1e-96
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 347 1e-95
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 347 1e-95
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 345 4e-95
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 344 1e-94
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 3e-94
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 8e-94
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 1e-92
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 7e-92
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 6e-91
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 1e-90
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 328 8e-90
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 9e-90
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 4e-89
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 4e-85
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 298 8e-81
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 297 2e-80
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 9e-79
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 3e-78
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 5e-78
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 284 1e-76
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 4e-76
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 280 3e-75
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 3e-75
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 274 1e-73
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 3e-73
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 4e-73
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 4e-73
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 9e-73
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 3e-72
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 5e-72
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 3e-71
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 1e-70
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 2e-70
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 3e-69
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 6e-69
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 258 1e-68
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 2e-67
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 2e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 2e-67
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 2e-67
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 248 7e-66
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 248 8e-66
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 6e-65
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 245 6e-65
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 9e-65
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 3e-64
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 238 7e-63
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 235 6e-62
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 4e-61
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 9e-61
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 5e-58
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 6e-58
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 6e-58
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 7e-58
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 3e-57
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 9e-57
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 213 4e-55
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 2e-54
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 208 1e-53
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 2e-53
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 195 7e-50
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 9e-50
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 191 1e-48
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 7e-48
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 3e-47
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 6e-46
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 2e-45
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 6e-45
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 7e-45
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 3e-41
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 3e-40
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 8e-40
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 5e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 5e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 91 3e-18
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 90 4e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 6e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 85 2e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 84 3e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 4e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 76 7e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 76 9e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 71 2e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 70 4e-12
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 69 7e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 65 2e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 65 2e-10
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 62 1e-09
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 61 2e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 59 8e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 57 4e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 56 7e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 55 1e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 53 5e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 53 8e-07
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 52 9e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 2e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/590 (57%), Positives = 435/590 (73%), Gaps = 4/590 (0%)
Query: 35 RFHSISTYPR--DPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLN 92
RF S S++ D VS+L+ A+KS S+ CR++H +V+KS+ YR GFIGDQLV CYL
Sbjct: 19 RFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLR 78
Query: 93 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFS-VMKSDLDLELNELTFI 151
+G A+ LFDEMP +D VSWNSL+SG+S RG LG C V S +M S++ NE+TF+
Sbjct: 79 LGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFL 138
Query: 152 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
S+ISAC ++EEG+ +H +K G+ +VKVVN IN YGK G + S+ KLF ++ +
Sbjct: 139 SMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK 198
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVH 271
N+VSWN+M+ + QNG + + YF+M R G PD+AT +++L++CE + + RL + +H
Sbjct: 199 NLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIH 258
Query: 272 GVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGT 331
G+I G N I T LL+LYSK+GRL S VF EI+ PD +A TAML+ YA HG G
Sbjct: 259 GLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGR 318
Query: 332 EAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCM 391
+AI+ FE + G+ PDHVTFTHLL+ACSHSGLV+EGKHYF+ MS Y + PRLDHYSCM
Sbjct: 319 DAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCM 378
Query: 392 VDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDP 451
VDLLGR GLL DA LIK MP EP+SGVWGALLGA RVY + +G +AAE L L+P D
Sbjct: 379 VDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDG 438
Query: 452 RNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSD 511
RNY+MLSNIYSASGLW DA+++R LMK K L R GCS+IEHGNKIH+FVV D+SHP+S+
Sbjct: 439 RNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESE 498
Query: 512 KIHKKLEEVMSKIQ-EFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMP 570
KI KKL+E+ K++ E G+ S+TE +LHDV E++K M+N+HSEKIA+A+GLLV + P
Sbjct: 499 KIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEP 558
Query: 571 LVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
++I KNLRIC DCH+TAK +SLIEKR IIIRD+KRFHHF DG CSC DYW
Sbjct: 559 IIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/564 (38%), Positives = 333/564 (59%), Gaps = 24/564 (4%)
Query: 65 RVIHAR-VIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSK 123
+++ AR S++ RD + +++ Y G +A+ LFDE P +D +W ++VSG+ +
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ 293
Query: 124 RGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMEL--- 180
+ +F M E NE+++ ++++ YV +++ EL
Sbjct: 294 NRMVEEARELFDKMP-----ERNEVSWNAMLAG-----------YVQGERMEMAKELFDV 337
Query: 181 ----QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYF 236
V NT+I Y + G + A LF M +++ VSW +M+A +Q+G EA+ F
Sbjct: 338 MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 237 SMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKI 296
M G + ++ S L C + L + +HG + G + + LL +Y K
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 297 GRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLL 356
G + + +F E++ D V+ M++GY+ HG G A++FFE REG++PD T +L
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 357 SACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPN 416
SACSH+GLVD+G+ YF M+ YGV P HY+CMVDLLGR GLL DA L+KNMPFEP+
Sbjct: 518 SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPD 577
Query: 417 SGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRAL 476
+ +WG LLGASRV+ N + + AA+ + A++P + Y++LSN+Y++SG W D K+R
Sbjct: 578 AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVR 637
Query: 477 MKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESI 536
M+ K + + PG S+IE NK H F V D HP+ D+I LEE+ ++++ G+VS+T +
Sbjct: 638 MRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVV 697
Query: 537 LHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKR 596
LHDV EE K MV HSE++A+AYG++ ++ P+ +IKNLR+C DCH K+++ I R
Sbjct: 698 LHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGR 757
Query: 597 TIIIRDAKRFHHFSDGLCSCGDYW 620
II+RD RFHHF DG CSCGDYW
Sbjct: 758 LIILRDNNRFHHFKDGSCSCGDYW 781
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 167/395 (42%), Gaps = 62/395 (15%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
RV K + + ++S YL G A+ LFDEMP +D VSWN ++ G+ + +LG
Sbjct: 85 RVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGK 144
Query: 130 CMSVFSVMKS--------------------------DLDLELNELTFISVIS-------- 155
+F +M D E N++++ +++S
Sbjct: 145 ARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKM 204
Query: 156 --ACALAKAREEGQYVHCCAVKLGMELQVKVV-----------------NTLINMYGKFG 196
AC L K+RE V + G + K+V NT+I Y + G
Sbjct: 205 EEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSG 264
Query: 197 FVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
+D A +LF Q++ +W +MV+ QN EA F M A + +Q
Sbjct: 265 KIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQ 324
Query: 257 ACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVA 316
+ L + + C N++ T++ Y++ G+++ + +F ++ K D V+
Sbjct: 325 GERMEMAKELFD-----VMPC---RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 376
Query: 317 CTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS 376
AM++GY+ G EA++ F + REG + +F+ LS C+ ++ GK +
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Query: 377 DVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
G + + ++ + +CG + +A +L K M
Sbjct: 437 KG-GYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 158/351 (45%), Gaps = 34/351 (9%)
Query: 87 VSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELN 146
+S Y+ G +A +F MP VS+N ++SG+ + G+ +F M + DL
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM-PERDLVSW 129
Query: 147 ELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFW 206
+ + L KARE ++ E V NT+++ Y + G VD A +F
Sbjct: 130 NVMIKGYVRNRNLGKARE--------LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 207 AMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRL 266
M E+N VSWN++++ QN + EA F L + ++ + + R+
Sbjct: 182 RMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQF 241
Query: 267 VEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAM 326
++++ ++ T++ Y++ G+++ + ++F E D TAM+SGY
Sbjct: 242 FDSMN--------VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ 293
Query: 327 HGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQP--R 384
+ EA + F++ E + V++ +L+ ++ K F VM P
Sbjct: 294 NRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVM-------PCRN 342
Query: 385 LDHYSCMVDLLGRCGLLNDAKELIKNMP-FEPNSGVWGALL-GASRVYHNI 433
+ ++ M+ +CG +++AK L MP +P S W A++ G S+ H+
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS--WAAMIAGYSQSGHSF 391
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/580 (37%), Positives = 346/580 (59%), Gaps = 9/580 (1%)
Query: 46 PLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGF-----IGDQLVSCYLNMGATPDAQ 100
P T++ L + S+L V + I R GF I LV Y G+ A+
Sbjct: 234 PSFITIVSVLPAVSALRLISV--GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
LFD M ++ VSWNS++ + + + M +F M D ++ +++ + + ACA
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEGVKPTDVSVMGALHACADL 350
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV 220
E G+++H +V+LG++ V VVN+LI+MY K VD+A +F + + +VSWN+M+
Sbjct: 351 GDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMI 410
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLD 280
QNGRP +A+NYFS MR + PD T VS++ A L + + +HGV+ LD
Sbjct: 411 LGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLD 470
Query: 281 ENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERT 340
+N+ + T L+++Y+K G + + +F +S+ AM+ GY HG G A++ FE
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Query: 341 IREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGL 400
+ ++P+ VTF ++SACSHSGLV+ G F +M + Y ++ +DHY MVDLLGR G
Sbjct: 531 QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGR 590
Query: 401 LNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNI 460
LN+A + I MP +P V+GA+LGA +++ N++ ++AAE L L+P D +++L+NI
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANI 650
Query: 461 YSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEV 520
Y A+ +W +VR M + L + PGCS +E N++H F +HPDS KI+ LE++
Sbjct: 651 YRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
Query: 521 MSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRIC 580
+ I+E G+V +T +L V ++K +++ HSEK+A+++GLL + A + + KNLR+C
Sbjct: 711 ICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVC 769
Query: 581 RDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
DCH K++SL+ R I++RD +RFHHF +G CSCGDYW
Sbjct: 770 ADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 216/447 (48%), Gaps = 25/447 (5%)
Query: 45 DPLVSTLLVALK---SSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
+P+V LK + L + IH ++KS D F L + Y +A+
Sbjct: 132 EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARK 191
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+FD MP +D VSWN++V+G+S+ G + + M + +L+ + +T +SV+ A + +
Sbjct: 192 VFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE-NLKPSFITIVSVLPAVSALR 250
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
G+ +H A++ G + V + L++MY K G +++A +LF M E+N+VSWNSM+
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
QN P EA+ F M G+ P + +++ L AC L +H + GLD
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
N+++V +L+++Y K ++ + +F ++ V+ AM+ G+A +G +A+ +F +
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPR--LDH----YSCMVDLL 395
++PD T+ +++A + + K ++GV R LD + +VD+
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKW-------IHGVVMRSCLDKNVFVTTALVDMY 483
Query: 396 GRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPS--DPRN 453
+CG + A+ LI +M E + W A++ Y GK A E + P
Sbjct: 484 AKCGAIMIAR-LIFDMMSERHVTTWNAMIDG---YGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 454 YIMLSNIY--SASGLWSDAAKVRALMK 478
LS I S SGL K +MK
Sbjct: 540 VTFLSVISACSHSGLVEAGLKCFYMMK 566
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 178/357 (49%), Gaps = 2/357 (0%)
Query: 55 LKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSW 114
L+ SSL R I V K+ Y++ F +LVS + G+ +A +F+ + +K V +
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 115 NSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAV 174
++++ GF+K DL + F M+ D D+E F ++ C G+ +H V
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYD-DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 175 KLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAIN 234
K G L + + L NMY K V+ A K+F M E+++VSWN++VA +QNG A+
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 235 YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
M L P T+VS+L A L L + + +HG G D + I T L+++Y+
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 295 KIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTH 354
K G L + ++F + + + V+ +M+ Y + EA+ F++ + EG++P V+
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 355 LLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
L AC+ G ++ G+ + +S G+ + + ++ + +C ++ A + +
Sbjct: 343 ALHACADLGDLERGR-FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 152/331 (45%), Gaps = 23/331 (6%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P D V L A L R IH ++ R+ + + L+S Y A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F ++ ++ VSWN+++ GF++ G + ++ FS M+S ++ + T++SVI+A A
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR-TVKPDTFTYVSVITAIAELSI 453
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
+++H ++ ++ V V L++MY K G + A +F M+E+++ +WN+M+
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
+G A+ F M+ + P+ T +S++ AC LVEA G+ + EN
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH---SGLVEA--GLKCFYMMKEN 568
Query: 283 ITI------VTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQ 335
+I +++L + GRLN + ++ KP AML +H + +
Sbjct: 569 YSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH----KNVN 624
Query: 336 FFERTIREGME--PD----HVTFTHLLSACS 360
F E+ E PD HV ++ A S
Sbjct: 625 FAEKAAERLFELNPDDGGYHVLLANIYRAAS 655
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/551 (39%), Positives = 324/551 (58%), Gaps = 2/551 (0%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
+V LD R+ + + L+ L G DA LF M KD VSW +++ G ++ G
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKE 253
Query: 130 CMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
+ F MK L++++ F SV+ AC A EG+ +H C ++ + + V + LI
Sbjct: 254 AIECFREMKVQ-GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 190 NMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
+MY K + A +F M ++N+VSW +MV Q GR EA+ F M+ +G+ PD
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
T+ + AC + HG T GL +T+ +L+ LY K G ++ S ++F E+
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 310 SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
+ D V+ TAM+S YA G E IQ F++ ++ G++PD VT T ++SACS +GLV++G+
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 370 HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRV 429
YF++M+ YG+ P + HYSCM+DL R G L +A I MPF P++ W LL A R
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 430 YHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCS 489
N+ IGK AAE+LI LDP P Y +LS+IY++ G W A++R M+ K + + PG S
Sbjct: 553 KGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQS 612
Query: 490 FIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMV 549
+I+ K+H F DD S P D+I+ KLEE+ +KI + G+ +T + HDV E +K M+
Sbjct: 613 WIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKML 672
Query: 550 NKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHF 609
N HSE++A+A+GL+ + P+ + KNLR+C DCH K +S + R I++RDA RFH F
Sbjct: 673 NYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRF 732
Query: 610 SDGLCSCGDYW 620
DG CSCGD+W
Sbjct: 733 KDGTCSCGDFW 743
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 194/439 (44%), Gaps = 71/439 (16%)
Query: 53 VALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFD-------- 104
+ L + + ++IH +I++L Y + F+ + +V Y M ++ A+ +FD
Sbjct: 14 IGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLF 73
Query: 105 -----------------------EMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
++P++D V+WN L+ G+S G +G + ++ M D
Sbjct: 74 SWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDF 133
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
L +T ++++ + G+ +H +KLG E + V + L+ MY G + A
Sbjct: 134 SANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDA 193
Query: 202 FKLFWAMTEQNM------------------------------VSWNSMVAVCTQNGRPNE 231
K+F+ + ++N VSW +M+ QNG E
Sbjct: 194 KKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKE 253
Query: 232 AINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLN 291
AI F M++ GL D+ S+L AC L + +H I ++I + + L++
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 292 LYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVT 351
+Y K L+ + VF + + + V+ TAM+ GY G EA++ F R G++PDH T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 352 FTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY----SCMVDLLGRCGLLNDAKEL 407
+SAC++ ++EG + + L HY + +V L G+CG ++D+ L
Sbjct: 374 LGQAISACANVSSLEEGSQFHG-----KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 408 IKNMPFEPNSGVWGALLGA 426
M ++ W A++ A
Sbjct: 429 FNEMNVR-DAVSWTAMVSA 446
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/577 (36%), Positives = 338/577 (58%), Gaps = 34/577 (5%)
Query: 78 RDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM 137
RD + +++ ++ +G A F++M +D V+WNS++SGF++RG + +FS M
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 138 KSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGF 197
D L + T SV+SACA + G+ +H V G ++ V+N LI+MY + G
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 198 VDSAFKL---------------------------------FWAMTEQNMVSWNSMVAVCT 224
V++A +L F ++ ++++V+W +M+
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENIT 284
Q+G EAIN F M G P+ T+ ++L +L + +HG G +++
Sbjct: 390 QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS 449
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE 343
+ L+ +Y+K G + ++ + F I + D V+ T+M+ A HG EA++ FE + E
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 344 GMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLND 403
G+ PDH+T+ + SAC+H+GLV++G+ YF +M DV + P L HY+CMVDL GR GLL +
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 404 AKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSA 463
A+E I+ MP EP+ WG+LL A RV+ NI +GK AAE L+ L+P + Y L+N+YSA
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSA 629
Query: 464 SGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSK 523
G W +AAK+R MK + + G S+IE +K+H F V+D +HP+ ++I+ ++++ +
Sbjct: 630 CGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDE 689
Query: 524 IQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDC 583
I++ G+V +T S+LHD+ EE+K ++ HSEK+A+A+GL+ + L I+KNLR+C DC
Sbjct: 690 IKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDC 749
Query: 584 HKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
H KF+S + R II+RD RFHHF DG CSC DYW
Sbjct: 750 HTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 174/412 (42%), Gaps = 95/412 (23%)
Query: 54 ALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVS 113
++ S+ + +++H RVIKS ++ + L++ Y G A+ LFDEMP + S
Sbjct: 23 SVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFS 82
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKS---------------------------DL---DL 143
WN+++S +SKRGD+ + F + D+ +
Sbjct: 83 WNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI 142
Query: 144 ELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK--------- 194
E + T +V+++ A + E G+ VH VKLG+ V V N+L+NMY K
Sbjct: 143 EPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 195 ----------------------FGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEA 232
G +D A F M E+++V+WNSM++ Q G A
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 233 INYFS-MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLN 291
++ FS M+R + L PD T+ S+L AC L + + +H I T G D + ++ L++
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 292 LYS---------------------------------KIGRLNASCKVFAEISKPDKVACT 318
+YS K+G +N + +F + D VA T
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 319 AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKH 370
AM+ GY HG EAI F + G P+ T +LS S + GK
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQ 434
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 288 TLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
T+L+ YSK G ++++C+ F ++ + D V+ T M+ GY G +AI+ ++EG+EP
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 348 DHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
T T++L++ + + ++ GK H F V G++ + + ++++ +CG AK
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVK---LGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 406 ELIKNMPFEPNSGVWGALLG 425
+ M S W A++
Sbjct: 202 FVFDRMVVRDISS-WNAMIA 220
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP-NKDFVSWNSLVSGFSK 123
+ IH +KS + + + L++ Y G A FD + +D VSW S++ ++
Sbjct: 433 KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 124 RGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG-QYVHCCAVKLGMELQV 182
G + +F M + L + +T++ V SAC A +G QY M+
Sbjct: 493 HGHAEEALELFETMLME-GLRPDHITYVGVFSACTHAGLVNQGRQYFDM------MKDVD 545
Query: 183 KVVNTL------INMYGKFGFVDSAFKLFWAM-TEQNMVSWNSMVAVC 223
K++ TL ++++G+ G + A + M E ++V+W S+++ C
Sbjct: 546 KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/639 (35%), Positives = 349/639 (54%), Gaps = 77/639 (12%)
Query: 52 LVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKD- 110
L A K ++C + LD D F+ + Y+ G DA+ +FD M +KD
Sbjct: 129 LSAFKVGKQIHC-----VSCVSGLDM-DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 111 ----------------------------------FVSWNSLVSGFSKRGDLGNCMSVFSV 136
VSWN ++SGF++ G + +F
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 137 MKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFG 196
+ L +++T SV+ + ++ G+ +H +K G+ V++ +I+MYGK G
Sbjct: 243 IHH-LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSG 301
Query: 197 -------------------------------FVDSAFKLFWAMTEQ----NMVSWNSMVA 221
VD A ++F EQ N+VSW S++A
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
C QNG+ EA+ F M++ G+ P+ T+ S+L AC + + HG L +
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
N+ + + L+++Y+K GR+N S VF + + V ++++G++MHG E + FE +
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
R ++PD ++FT LLSAC GL DEG YF++MS+ YG++PRL+HYSCMV+LLGR G L
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKL 541
Query: 402 NDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIY 461
+A +LIK MPFEP+S VWGALL + R+ +N+ + + AAE L L+P +P Y++LSNIY
Sbjct: 542 QEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIY 601
Query: 462 SASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVM 521
+A G+W++ +R M++ L +NPGCS+I+ N+++ + D SHP D+I +K++E+
Sbjct: 602 AAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEIS 661
Query: 522 SKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICR 581
++++ G + LHDV E+ + M+ HSEK+A+ +GLL + PL +IKNLRIC
Sbjct: 662 KEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICG 721
Query: 582 DCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
DCH KF+S R I IRD RFHHF DG+CSCGD+W
Sbjct: 722 DCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 169/367 (46%), Gaps = 40/367 (10%)
Query: 68 HARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDL 127
HAR++KS DG+I +L++ Y N DA L+ +P+ S++SL+ +K
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 128 GNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNT 187
+ VFS M S L + ++ CA A + G+ +HC + G+++ V +
Sbjct: 98 TQSIGVFSRMFSH-GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 188 LINMYGKFGFVDSAFKLFWAMT-----------------------------------EQN 212
+ +MY + G + A K+F M+ E N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
+VSWN +++ ++G EA+ F + G PD+ T+ S+L + + + +HG
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 273 VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTE 332
+ GL ++ +++ ++++Y K G + +F + + C A ++G + +G +
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 333 AIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMV 392
A++ FE + ME + V++T +++ C+ +G E F+ M V GV+P ++ +
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKP---NHVTIP 392
Query: 393 DLLGRCG 399
+L CG
Sbjct: 393 SMLPACG 399
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 140/325 (43%), Gaps = 38/325 (11%)
Query: 35 RFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMG 94
+ H + P VS++L ++ S L R+IH VIK +D + ++ Y G
Sbjct: 242 KIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSG 301
Query: 95 ATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVI 154
LF++ + N+ ++G S+ G + + +F + K +ELN +++ S+I
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQ-TMELNVVSWTSII 360
Query: 155 SAC--------ALAKARE---------------------------EGQYVHCCAVKLGME 179
+ C AL RE G+ H AV++ +
Sbjct: 361 AGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL 420
Query: 180 LQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMM 239
V V + LI+MY K G ++ + +F M +N+V WNS++ + +G+ E ++ F +
Sbjct: 421 DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESL 480
Query: 240 RLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF-TCGLDENITIVTTLLNLYSKIGR 298
L PD + SLL AC + L ++ G+ + + ++NL + G+
Sbjct: 481 MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGK 540
Query: 299 LNASCKVFAEIS-KPDKVACTAMLS 322
L + + E+ +PD A+L+
Sbjct: 541 LQEAYDLIKEMPFEPDSCVWGALLN 565
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 118/244 (48%), Gaps = 8/244 (3%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + ++L A + ++L R H ++ + +G L+ Y G +Q++
Sbjct: 386 PNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIV 445
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF-SVMKSDLDLELNELTFISVISACALAK 161
F+ MP K+ V WNSL++GFS G MS+F S+M++ L + ++F S++SAC
Sbjct: 446 FNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDF--ISFTSLLSACGQVG 503
Query: 162 AREEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSM 219
+EG +Y + + G++ +++ + ++N+ G+ G + A+ L M E + W ++
Sbjct: 504 LTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563
Query: 220 VAVCT-QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCG 278
+ C QN I + L P ++S + A + + V+++ + + G
Sbjct: 564 LNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTE--VDSIRNKMESLG 621
Query: 279 LDEN 282
L +N
Sbjct: 622 LKKN 625
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/612 (35%), Positives = 346/612 (56%), Gaps = 34/612 (5%)
Query: 42 YPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
YP L+ A SSL + +H +KS D F+ + L+ CY + G A
Sbjct: 128 YPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACK 187
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+F + KD VSWNS+++GF ++G + +F M+S+ D++ + +T + V+SACA +
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIR 246
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE----------- 210
E G+ V + + + + + N +++MY K G ++ A +LF AM E
Sbjct: 247 NLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 306
Query: 211 --------------------QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLN-GLFPDEA 249
+++V+WN++++ QNG+PNEA+ F ++L + ++
Sbjct: 307 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 366
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
T+VS L AC + L +H I G+ N + + L+++YSK G L S +VF +
Sbjct: 367 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 426
Query: 310 SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
K D +AM+ G AMHGCG EA+ F + ++P+ VTFT++ ACSH+GLVDE +
Sbjct: 427 EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE 486
Query: 370 HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRV 429
F M YG+ P HY+C+VD+LGR G L A + I+ MP P++ VWGALLGA ++
Sbjct: 487 SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 546
Query: 430 YHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCS 489
+ N+++ + A L+ L+P + +++LSNIY+ G W + +++R M+ L + PGCS
Sbjct: 547 HANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606
Query: 490 FIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDV-AEEIKTNM 548
IE IH F+ D +HP S+K++ KL EVM K++ G+ E +L + EE+K
Sbjct: 607 SIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQS 666
Query: 549 VNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHH 608
+N HSEK+A+ YGL+ + A + +IKNLR+C DCH AK +S + R II+RD RFHH
Sbjct: 667 LNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHH 726
Query: 609 FSDGLCSCGDYW 620
F +G CSC D+W
Sbjct: 727 FRNGQCSCNDFW 738
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 213/458 (46%), Gaps = 43/458 (9%)
Query: 60 SLYCCRVIHARVIKSLDYRDGFIGDQL--VSCYLNMGATPDAQLLFDEMPNKDFVSWNSL 117
SL + H +I++ + D + +L ++ + + A+ +FDE+P + +WN+L
Sbjct: 42 SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 118 VSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLG 177
+ ++ D + F M S+ N+ TF +I A A + GQ +H AVK
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 178 MELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFS 237
+ V V N+LI+ Y G +DSA K+F + E+++VSWNSM+ Q G P++A+ F
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 238 MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
M + TMV +L AC + V I ++ N+T+ +L++Y+K G
Sbjct: 222 KMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281
Query: 298 RLNASCKVFAEISKPDKVACTAMLSGYAM------------------------------- 326
+ + ++F + + D V T ML GYA+
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 327 HGCGTEA-IQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRL 385
+G EA I F E +++ M+ + +T LSAC+ G ++ G+ + +G++
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNF 400
Query: 386 DHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIA 445
S ++ + +CG L ++E+ ++ + + VW A++G ++ G EA +
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH---GCGNEAVDMFYK 456
Query: 446 LDPSDPR-NYIMLSNIYSA---SGLWSDAAKVRALMKT 479
+ ++ + N + +N++ A +GL +A + M++
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 494
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/592 (36%), Positives = 349/592 (58%), Gaps = 15/592 (2%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIK--SLDYRDGFIGDQLVSCYLNMGATPDAQ 100
P + +S++L A L + +HA +K SLD + F+G LV Y N +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD-ENSFVGSALVDMYCNCKQVLSGR 358
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
+FD M ++ WN++++G+S+ + +F M+ L N T V+ AC +
Sbjct: 359 RVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV 220
A + +H VK G++ V NTL++MY + G +D A ++F M ++++V+WN+M+
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478
Query: 221 AVCTQNGRPNEAINYFSMMR-----------LNGLFPDEATMVSLLQACETLHLRRLVEA 269
+ +A+ M+ L P+ T++++L +C L +
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 270 VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC 329
+H L ++ + + L+++Y+K G L S KVF +I + + + ++ Y MHG
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 330 GTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS 389
G EAI + +G++P+ VTF + +ACSHSG+VDEG F VM YGV+P DHY+
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 658
Query: 390 CMVDLLGRCGLLNDAKELIKNMPFEPN-SGVWGALLGASRVYHNISIGKEAAENLIALDP 448
C+VDLLGR G + +A +L+ MP + N +G W +LLGASR+++N+ IG+ AA+NLI L+P
Sbjct: 659 CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP 718
Query: 449 SDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHP 508
+ +Y++L+NIYS++GLW A +VR MK + + + PGCS+IEHG+++H+FV D SHP
Sbjct: 719 NVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHP 778
Query: 509 DSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAAD 568
S+K+ LE + ++++ G+V +T +LH+V E+ K ++ HSEK+A+A+G+L ++
Sbjct: 779 QSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPG 838
Query: 569 MPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+ + KNLR+C DCH KF+S I R II+RD +RFH F +G CSCGDYW
Sbjct: 839 TIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 180/384 (46%), Gaps = 27/384 (7%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGF------IGDQLVSCYLNMGAT 96
P + LL A+ + + IHA V Y+ G+ + + LV+ Y G
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHV-----YKFGYGVDSVTVANTLVNLYRKCGDF 149
Query: 97 PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 156
+FD + ++ VSWNSL+S + F M D ++E + T +SV++A
Sbjct: 150 GAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML-DENVEPSSFTLVSVVTA 208
Query: 157 CA---LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM 213
C+ + + G+ VH ++ G EL ++NTL+ MYGK G + S+ L + +++
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 214 VSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGV 273
V+WN++++ QN + EA+ Y M L G+ PDE T+ S+L AC L + R + +H
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 274 IFTCG-LDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTE 332
G LDEN + + L+++Y ++ + +VF + AM++GY+ + E
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKE 387
Query: 333 AIQFF---ERTIREGMEPDHVTFTHLLSACSHSGLVD--EGKHYFQVMSDVYGVQPRLDH 387
A+ F E + G+ + T ++ AC SG E H F V G+
Sbjct: 388 ALLLFIGMEES--AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR---GLDRDRFV 442
Query: 388 YSCMVDLLGRCGLLNDAKELIKNM 411
+ ++D+ R G ++ A + M
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 39 ISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPD 98
+S P + T+L + + S+L + IHA IK+ D +G LV Y G
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 99 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 158
++ +FD++P K+ ++WN ++ + G+ + + +M ++ NE+TFISV +AC+
Sbjct: 571 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ-GVKPNEVTFISVFAACS 629
Query: 159 LAKAREEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE--QNMVS 215
+ +EG + + G+E ++++ G+ G + A++L M +
Sbjct: 630 HSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGA 689
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
W+S++ + N I + L L P+ A+ LL
Sbjct: 690 WSSLLGASRIHN--NLEIGEIAAQNLIQLEPNVASHYVLL 727
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 231 EAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLD-ENITIVTTL 289
EA+ + M + G+ PD +LL+A L L + +H ++ G +++T+ TL
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 290 LNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDH 349
+NLY K G A KVF IS+ ++V+ +++S A++ F + E +EP
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 350 VTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQP-RLDHY--SCMVDLLGRCGLLNDAKE 406
T +++ACS+ + + QV + YG++ L+ + + +V + G+ G L +K
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHA--YGLRKGELNSFIINTLVAMYGKLGKLASSKV 257
Query: 407 LI 408
L+
Sbjct: 258 LL 259
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/553 (38%), Positives = 341/553 (61%), Gaps = 3/553 (0%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
+V +RD L+ Y + G +AQ LFDE+P KD VSWN+++SG+++ G+
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE 249
Query: 130 CMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
+ +F M ++ +E T ++V+SACA + + E G+ VH G +K+VN LI
Sbjct: 250 ALELFKDMMKT-NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308
Query: 190 NMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
++Y K G +++A LF + ++++SWN+++ T EA+ F M +G P++
Sbjct: 309 DLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368
Query: 250 TMVSLLQACETLHLRRLVEAVHGVI--FTCGLDENITIVTTLLNLYSKIGRLNASCKVFA 307
TM+S+L AC L + +H I G+ ++ T+L+++Y+K G + A+ +VF
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 308 EISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDE 367
I + AM+ G+AMHG + F R + G++PD +TF LLSACSHSG++D
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 368 GKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGAS 427
G+H F+ M+ Y + P+L+HY CM+DLLG GL +A+E+I M EP+ +W +LL A
Sbjct: 489 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 548
Query: 428 RVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPG 487
+++ N+ +G+ AENLI ++P +P +Y++LSNIY+++G W++ AK RAL+ K + + PG
Sbjct: 549 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 608
Query: 488 CSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTN 547
CS IE + +H F++ D HP + +I+ LEE+ +++ GFV +T +L ++ EE K
Sbjct: 609 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEG 668
Query: 548 MVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFH 607
+ HSEK+A+A+GL+ + L I+KNLR+CR+CH+ K +S I KR II RD RFH
Sbjct: 669 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 728
Query: 608 HFSDGLCSCGDYW 620
HF DG+CSC DYW
Sbjct: 729 HFRDGVCSCNDYW 741
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 211/451 (46%), Gaps = 52/451 (11%)
Query: 10 MTLTLSPRILHCLPTCCTLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHA 69
+T+ S H LP S + + SI +P L L + +L R+IHA
Sbjct: 8 LTVPSSSYPFHFLP------SSSDPPYDSIRNHPS-------LSLLHNCKTLQSLRIIHA 54
Query: 70 RVIKSLDYRDGFIGDQLVS-CYL--NMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
++IK + + +L+ C L + P A +F + + + WN++ G + D
Sbjct: 55 QMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSD 114
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ + ++ M S L L N TF V+ +CA +KA +EGQ +H +KLG +L + V
Sbjct: 115 PVSALKLYVCMIS-LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHT 173
Query: 187 TLINMY---GKF----------------------------GFVDSAFKLFWAMTEQNMVS 215
+LI+MY G+ G++++A KLF + +++VS
Sbjct: 174 SLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVS 233
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
WN+M++ + G EA+ F M + PDE+TMV+++ AC L VH I
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
G N+ IV L++LYSK G L +C +F + D ++ ++ GY EA+
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSD--VYGVQPRLDHYSCMVD 393
F+ +R G P+ VT +L AC+H G +D G+ + V D + GV + ++D
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR-WIHVYIDKRLKGVTNASSLRTSLID 412
Query: 394 LLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+ +CG + A ++ ++ + S W A++
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSS-WNAMI 442
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/602 (36%), Positives = 352/602 (58%), Gaps = 11/602 (1%)
Query: 30 SETSVRFHSISTYPRDPLVSTLLVALKSSSSLY---CCRVIHARVIKSLDYRDGFIGDQL 86
+E + F S+ P S+ A+K+ SSL+ + H + D F+ L
Sbjct: 58 AEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSAL 117
Query: 87 VSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFS---VMKSDLD- 142
+ Y G DA+ +FDE+P ++ VSW S++ G+ G+ + +S+F V ++D D
Sbjct: 118 IVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDD 177
Query: 143 -LELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFG--FVD 199
+ L+ + +SVISAC+ A+ + +H +K G + V V NTL++ Y K G V
Sbjct: 178 AMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA 237
Query: 200 SAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA-TMVSLLQAC 258
A K+F + +++ VS+NS+++V Q+G NEA F + N + A T+ ++L A
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 259 ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACT 318
R+ + +H + GL++++ + T+++++Y K GR+ + K F + + + T
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWT 357
Query: 319 AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV 378
AM++GY MHG +A++ F I G+ P+++TF +L+ACSH+GL EG +F M
Sbjct: 358 AMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
Query: 379 YGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKE 438
+GV+P L+HY CMVDLLGR G L A +LI+ M +P+S +W +LL A R++ N+ + +
Sbjct: 418 FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEI 477
Query: 439 AAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIH 498
+ L LD S+ Y++LS+IY+ +G W D +VR +MK + L + PG S +E ++H
Sbjct: 478 SVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVH 537
Query: 499 RFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIAL 558
F++ D HP +KI++ L E+ K+ E G+VS T S+ HDV EE K + HSEK+A+
Sbjct: 538 VFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAI 597
Query: 559 AYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGD 618
A+G++ + + ++KNLR+C DCH K +S I R ++RDAKRFHHF DG CSCGD
Sbjct: 598 AFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGD 657
Query: 619 YW 620
YW
Sbjct: 658 YW 659
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 194/394 (49%), Gaps = 28/394 (7%)
Query: 102 LFDEMPNK-DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
LF+ +K D SWNS+++ ++ GD + FS M+ L L +F I AC+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRK-LSLYPTRSSFPCAIKACSSL 89
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV 220
G+ H A G + + V + LI MY G ++ A K+F + ++N+VSW SM+
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 221 AVCTQNGRPNEAINYFSMMRL------NGLFPDEATMVSLLQACETLHLRRLVEAVHGVI 274
NG +A++ F + + + +F D +VS++ AC + + L E++H +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 275 FTCGLDENITIVTTLLNLYSKIGR--LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTE 332
G D +++ TLL+ Y+K G + + K+F +I D+V+ +++S YA G E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 333 AIQFFERTIREGMEP-DHVTFTHLLSACSHSGLVDEGK-HYFQVMSDVYGVQPRLDHYSC 390
A + F R ++ + + +T + +L A SHSG + GK + QV+ G++ + +
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR--MGLEDDVIVGTS 327
Query: 391 MVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSD 450
++D+ +CG + A++ M N W A++ ++ + + +A E A+ S
Sbjct: 328 IIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGHAA---KALELFPAMIDSG 383
Query: 451 PR-NYIMLSNIYSA---SGL------WSDAAKVR 474
R NYI ++ +A +GL W +A K R
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/596 (33%), Positives = 350/596 (58%), Gaps = 7/596 (1%)
Query: 31 ETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCY 90
+ ++R S + P L++ SSL +H ++ + +D F+ +L+ Y
Sbjct: 63 KQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMY 122
Query: 91 LNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTF 150
++G+ A+ +FD+ + WN+L + G + ++ M + + +E + T+
Sbjct: 123 SDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM-NRIGVESDRFTY 181
Query: 151 ISVISACALAKAR----EEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFW 206
V+ AC ++ +G+ +H + G V ++ TL++MY +FG VD A +F
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFG 241
Query: 207 AMTEQNMVSWNSMVAVCTQNGRPNEAINYF-SMMR-LNGLFPDEATMVSLLQACETLHLR 264
M +N+VSW++M+A +NG+ EA+ F MMR P+ TMVS+LQAC +L
Sbjct: 242 GMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAAL 301
Query: 265 RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGY 324
+ +HG I GLD + +++ L+ +Y + G+L +VF + D V+ +++S Y
Sbjct: 302 EQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSY 361
Query: 325 AMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPR 384
+HG G +AIQ FE + G P VTF +L ACSH GLV+EGK F+ M +G++P+
Sbjct: 362 GVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQ 421
Query: 385 LDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLI 444
++HY+CMVDLLGR L++A +++++M EP VWG+LLG+ R++ N+ + + A+ L
Sbjct: 422 IEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF 481
Query: 445 ALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDD 504
AL+P + NY++L++IY+ + +W + +V+ L++ + L + PG ++E K++ FV D
Sbjct: 482 ALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVD 541
Query: 505 YSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLV 564
+P ++IH L ++ ++E G++ +T+ +L+++ E K +V HSEK+ALA+GL+
Sbjct: 542 EFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLIN 601
Query: 565 SAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
++ P+ I KNLR+C DCH KF+S ++ I++RD RFH F +G+CSCGDYW
Sbjct: 602 TSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/553 (36%), Positives = 330/553 (59%), Gaps = 5/553 (0%)
Query: 71 VIKSLDYRDGFIGDQLV---SCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDL 127
V + R GD+ V +C + G + +F+ MP KD VS+N++++G+++ G
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223
Query: 128 GNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNT 187
+ + + M + DL+ + T SV+ + +G+ +H ++ G++ V + ++
Sbjct: 224 EDALRMVREMGT-TDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 188 LINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPD 247
L++MY K ++ + ++F + ++ +SWNS+VA QNGR NEA+ F M + P
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 248 EATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFA 307
S++ AC L L + +HG + G NI I + L+++YSK G + A+ K+F
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402
Query: 308 EISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDE 367
++ D+V+ TA++ G+A+HG G EA+ FE R+G++P+ V F +L+ACSH GLVDE
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 368 GKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGAS 427
YF M+ VYG+ L+HY+ + DLLGR G L +A I M EP VW LL +
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Query: 428 RVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPG 487
V+ N+ + ++ AE + +D + Y+++ N+Y+++G W + AK+R M+ K L + P
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582
Query: 488 CSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTN 547
CS+IE NK H FV D SHP DKI++ L+ VM ++++ G+V++T +LHDV EE K
Sbjct: 583 CSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRE 642
Query: 548 MVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFH 607
++ HSE++A+A+G++ + + + KN+RIC DCH KF+S I +R II+RD RFH
Sbjct: 643 LLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFH 702
Query: 608 HFSDGLCSCGDYW 620
HF+ G CSCGDYW
Sbjct: 703 HFNRGNCSCGDYW 715
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 192/406 (47%), Gaps = 49/406 (12%)
Query: 47 LVSTLLVALKSSSSLYCCRVIHARVIK--SLDYRDGFIGDQLVSCYLNMGATPDAQLLFD 104
L+ TL+ S + +HA+ I+ SL + I ++S Y N+ +A LLF
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI---VISIYTNLKLLHEALLLFK 63
Query: 105 EMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKARE 164
+ + ++W S++ F+ + ++ F M++ + + F SV+ +C +
Sbjct: 64 TLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNV-FPSVLKSCTMMMDLR 122
Query: 165 EGQYVHCCAVKLGMELQVKVVNTLINMYGK------------------------------ 194
G+ VH V+LGM+ + N L+NMY K
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 195 -------FGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPD 247
FG +DS ++F M +++VS+N+++A Q+G +A+ M L PD
Sbjct: 183 AETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 248 EATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF 306
T+ S+L E + + + E +HG + G+D ++ I ++L+++Y+K R+ S +VF
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKE-IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 307 AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
+ + D ++ ++++GY +G EA++ F + + ++P V F+ ++ AC+H +
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 367 EGKH-YFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
GK + V+ +G + S +VD+ +CG + A+++ M
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIA--SALVDMYSKCGNIKAARKIFDRM 404
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 131/265 (49%), Gaps = 7/265 (2%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
IH VI+ D +IG LV Y D++ +F + +D +SWNSLV+G+ + G
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ +F M + ++ + F SVI ACA G+ +H ++ G + + +
Sbjct: 324 YNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
L++MY K G + +A K+F M + VSW +++ +G +EA++ F M+ G+ P
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 247 DEATMVSLLQACETLHLRRLVEA---VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
++ V++L AC H+ + EA + + GL++ + + +L + G+L +
Sbjct: 443 NQVAFVAVLTACS--HVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Query: 304 KVFAEI-SKPDKVACTAMLSGYAMH 327
+++ +P + +LS ++H
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 128/322 (39%), Gaps = 56/322 (17%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P S+++ A ++L+ + +H V++ + FI LV Y G A+ +
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD M D VSW +++ G + G +S+F MK ++ N++ F++V++AC+
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ-GVKPNQVAFVAVLTACS---- 455
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE-----QNMVSWN 217
G VD A+ F +MT+ Q + +
Sbjct: 456 -------------------------------HVGLVDEAWGYFNSMTKVYGLNQELEHYA 484
Query: 218 SMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC 277
++ + + G+ EA N+ S M + P + +LL +C L E V IFT
Sbjct: 485 AVADLLGRAGKLEEAYNFISKMCVE---PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 541
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEISKP---DKVACTAMLSGYAMHGC----- 329
EN+ + N+Y+ GR K+ + K K AC+ + HG
Sbjct: 542 D-SENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600
Query: 330 ---GTEAIQFFERTIREGMEPD 348
+ I F + + E ME +
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKE 622
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/641 (33%), Positives = 363/641 (56%), Gaps = 23/641 (3%)
Query: 1 MIRLIHAK--FMTLTLSPRILHCLPTCCTLLSETSVRFHSISTYPRDPLV---------- 48
+ +LIHA F +T + ++ LP +R +S + + +D L+
Sbjct: 56 ITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARV 115
Query: 49 -------STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
LL A S L R +HA+V + D F+ + L++ Y A+
Sbjct: 116 SPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 102 LFD--EMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACAL 159
+F+ +P + VSW ++VS +++ G+ + +FS M+ +D++ + + +SV++A
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK-MDVKPDWVALVSVLNAFTC 234
Query: 160 AKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSM 219
+ ++G+ +H VK+G+E++ ++ +L MY K G V +A LF M N++ WN+M
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294
Query: 220 VAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL 279
++ +NG EAI+ F M + PD ++ S + AC + +++ +
Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY 354
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFER 339
+++ I + L+++++K G + + VF D V +AM+ GY +HG EAI +
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRA 414
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
R G+ P+ VTF LL AC+HSG+V EG +F M+D + + P+ HY+C++DLLGR G
Sbjct: 415 MERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAG 473
Query: 400 LLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSN 459
L+ A E+IK MP +P VWGALL A + + ++ +G+ AA+ L ++DPS+ +Y+ LSN
Sbjct: 474 HLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSN 533
Query: 460 IYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEE 519
+Y+A+ LW A+VR MK K L ++ GCS++E ++ F V D SHP ++I +++E
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEW 593
Query: 520 VMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRI 579
+ S+++E GFV+ ++ LHD+ +E + HSE+IA+AYGL+ + PL I KNLR
Sbjct: 594 IESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRA 653
Query: 580 CRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
C +CH K +S + R I++RD RFHHF DG+CSCGDYW
Sbjct: 654 CVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 190/366 (51%), Gaps = 13/366 (3%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
+ IHAR++ GF+ +L+ + G A+ +FD++P WN+++ G+S+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
+ + ++S M+ + + TF ++ AC+ + G++VH +LG + V V
Sbjct: 98 NHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 185 VNTLINMYGKFGFVDSAFKLFWA--MTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLN 242
N LI +Y K + SA +F + E+ +VSW ++V+ QNG P EA+ FS MR
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 243 GLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNAS 302
+ PD +VS+L A L + ++H + GL+ ++ +L +Y+K G++ +
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 303 CKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHS 362
+F ++ P+ + AM+SGYA +G EAI F I + + PD ++ T +SAC+
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 363 GLVDEGKHYFQVM--SDVYGVQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMPFEPNSG 418
G +++ + ++ + SD R D + S ++D+ +CG + A+ L+ + + +
Sbjct: 337 GSLEQARSMYEYVGRSDY-----RDDVFISSALIDMFAKCGSVEGAR-LVFDRTLDRDVV 390
Query: 419 VWGALL 424
VW A++
Sbjct: 391 VWSAMI 396
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 267 VEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAM 326
++ +H + GL + ++T L++ S G + + +VF ++ +P A++ GY+
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96
Query: 327 HGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLD 386
+ +A+ + + PD TF HLL ACS + G+ V + V+ + D
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF---VHAQVFRLGFDAD 153
Query: 387 HY--SCMVDLLGRCGLLNDAKELIKNMPFEPNSGV-WGALLGA 426
+ + ++ L +C L A+ + + +P + V W A++ A
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/548 (37%), Positives = 322/548 (58%), Gaps = 2/548 (0%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R++HA +++S+ D +G+ L++ Y G+ +A+ +F++MP +DFV+W +L+SG+S+
Sbjct: 80 RIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
+ + F+ M NE T SVI A A + G +H VK G + V V
Sbjct: 140 DRPCDALLFFNQMLR-FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
+ L+++Y ++G +D A +F A+ +N VSWN+++A + +A+ F M +G
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
P + SL AC + + VH + G TLL++Y+K G ++ + K
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
+F ++K D V+ ++L+ YA HG G EA+ +FE R G+ P+ ++F +L+ACSHSGL
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 365 VDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+DEG HY+++M G+ P HY +VDLLGR G LN A I+ MP EP + +W ALL
Sbjct: 379 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 425 GASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLAR 484
A R++ N +G AAE++ LDP DP +++L NIY++ G W+DAA+VR MK + +
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
Query: 485 NPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEI 544
P CS++E N IH FV +D HP ++I +K EEV++KI+E G+V +T ++ V ++
Sbjct: 498 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 557
Query: 545 KTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAK 604
+ + HSEKIALA+ LL + + I KN+R+C DCH K S + R II+RD
Sbjct: 558 REVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTN 617
Query: 605 RFHHFSDG 612
RFHHF D
Sbjct: 618 RFHHFKDA 625
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/579 (36%), Positives = 337/579 (58%), Gaps = 6/579 (1%)
Query: 46 PLVSTLLVALKSSSSL----YCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
P T+ LK++SSL + +H IK + D F+ L+ Y +A++
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
LF E N D V+WN++++G+++ D + +F++M + ++ T +V C
Sbjct: 474 LF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS-DDFTLATVFKTCGFLF 531
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
A +G+ VH A+K G +L + V + +++MY K G + +A F ++ + V+W +M++
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
C +NG A + FS MRL G+ PDE T+ +L +A L +H
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
+ + T+L+++Y+K G ++ + +F I + A AML G A HG G E +Q F++
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
G++PD VTF +LSACSHSGLV E + + M YG++P ++HYSC+ D LGR GL+
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLV 771
Query: 402 NDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIY 461
A+ LI++M E ++ ++ LL A RV + GK A L+ L+P D Y++LSN+Y
Sbjct: 772 KQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMY 831
Query: 462 SASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVM 521
+A+ W + R +MK + ++PG S+IE NKIH FVVDD S+ ++ I++K+++++
Sbjct: 832 AAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMI 891
Query: 522 SKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICR 581
I++ G+V ET+ L DV EE K + HSEK+A+A+GLL + P+ +IKNLR+C
Sbjct: 892 RDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCG 951
Query: 582 DCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
DCH K+++ + R I++RDA RFH F DG+CSCGDYW
Sbjct: 952 DCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 206/463 (44%), Gaps = 64/463 (13%)
Query: 12 LTLSPRILHCLPTCCTLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARV 71
+TLSP + CL + SE+ + D V+ LV + L +V +V
Sbjct: 146 MTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNI----YLKFGKVKEGKV 201
Query: 72 I-KSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM------PN---------------- 108
+ + + YRD + + ++ YL MG +A L PN
Sbjct: 202 LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD 261
Query: 109 ----KDFVSWNSLVS---------GFSK---RGDLGNCMSVFSVMKSDLDLELNELTFIS 152
K F + N S G S+ G + F+ M + D+E +++TFI
Sbjct: 262 AGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADM-VESDVECDQVTFIL 320
Query: 153 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY---GKFGFVDSAFKLFWAMT 209
+++ + GQ VHC A+KLG++L + V N+LINMY KFGF + F M+
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD---NMS 377
Query: 210 EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQAC----ETLHLRR 265
E++++SWNS++A QNG EA+ F + GL PD+ TM S+L+A E L L +
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK 437
Query: 266 LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYA 325
V VH + D ++ T L++ YS+ R ++ E D VA AM++GY
Sbjct: 438 QVH-VHAIKINNVSDSFVS--TALIDAYSR-NRCMKEAEILFERHNFDLVAWNAMMAGYT 493
Query: 326 MHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQP 383
G + ++ F ++G D T + C +++GK H + + S G
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS---GYDL 550
Query: 384 RLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
L S ++D+ +CG ++ A+ ++P P+ W ++
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISG 592
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 188/399 (47%), Gaps = 18/399 (4%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
+ + L++ Y + A+ +FD M +D +SWNS+++G ++ G + +F +
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-C 410
Query: 142 DLELNELTFISVI-SACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
L+ ++ T SV+ +A +L + + VH A+K+ V LI+ Y + +
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 201 AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACET 260
A LF ++V+WN+M+A TQ+ ++ + F++M G D+ T+ ++ + C
Sbjct: 471 AEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF 529
Query: 261 LHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAM 320
L + VH G D ++ + + +L++Y K G ++A+ F I PD VA T M
Sbjct: 530 LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTM 589
Query: 321 LSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYG 380
+SG +G A F + G+ PD T L A S +++G+ Q+ ++
Sbjct: 590 ISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR---QIHANALK 646
Query: 381 VQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKE 438
+ D + + +VD+ +CG ++DA L K + N W A+L + GKE
Sbjct: 647 LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGE---GKE 702
Query: 439 AAE-----NLIALDPSDPRNYIMLSNIYSASGLWSDAAK 472
+ + + P D +I + + S SGL S+A K
Sbjct: 703 TLQLFKQMKSLGIKP-DKVTFIGVLSACSHSGLVSEAYK 740
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 6/200 (3%)
Query: 57 SSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNS 116
+SS L + HAR++ + + F+ + L+S Y G+ A+ +FD+MP++D VSWNS
Sbjct: 51 TSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 117 LVSGFSKRGD-----LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHC 171
+++ +++ + + +F +++ D+ + + +T ++ C + + H
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDV-VYTSRMTLSPMLKLCLHSGYVWASESFHG 169
Query: 172 CAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNE 231
A K+G++ V L+N+Y KFG V LF M +++V WN M+ + G E
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEE 229
Query: 232 AINYFSMMRLNGLFPDEATM 251
AI+ S +GL P+E T+
Sbjct: 230 AIDLSSAFHSSGLNPNEITL 249
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGR-----PNEAINYFSM 238
++N LI+MY K G + A ++F M ++++VSWNS++A Q+ +A F +
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 239 MRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR 298
+R + ++ T+ +L+ C E+ HG GLD + + L+N+Y K G+
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGK 195
Query: 299 LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTF 352
+ +F E+ D V ML Y G EAI G+ P+ +T
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + ++TL A ++L R IHA +K D F+G LV Y G+ DA L
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F + + +WN+++ G ++ G+ + +F MKS L ++ +++TFI V+SAC+ +
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS-LGIKPDKVTFIGVLSACSHSGL 734
Query: 163 REEGQYVHCCAV--KLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSM 219
E Y H ++ G++ +++ + L + G+ G V A L +M+ E + + ++
Sbjct: 735 VSEA-YKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTL 793
Query: 220 VAVCTQNG 227
+A C G
Sbjct: 794 LAACRVQG 801
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 28/249 (11%)
Query: 266 LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYA 325
L + H I T + ++ L+++YSK G L + +VF ++ D V+ ++L+ YA
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 326 MHG-CGTEAIQ---FFERTIREG-MEPDHVTFTHLLSACSHSGLV--DEGKHYFQVMSDV 378
C E IQ R +R+ + +T + +L C HSG V E H + +
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 379 YGVQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIG 436
G D + +V++ + G + + K L + MP+ + +W +L A Y +
Sbjct: 177 DG-----DEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA---YLEMGFK 227
Query: 437 KEAAENLIALDPS--DPRNYIMLSNIYSASGLWSDAAKVRALMK-------TKVLARNPG 487
+EA + A S +P N I L + SG SDA +V++ ++++ RN G
Sbjct: 228 EEAIDLSSAFHSSGLNP-NEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKG 286
Query: 488 CSFIEHGNK 496
S H +
Sbjct: 287 LSEYLHSGQ 295
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/543 (39%), Positives = 321/543 (59%), Gaps = 10/543 (1%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK 138
D F + ++SCY+ AQ FD MP KD SWN++++G+++RG++ +F M
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM- 181
Query: 139 SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFV 198
+E NE+++ ++IS E+ + A G V +I Y K V
Sbjct: 182 ----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKV 233
Query: 199 DSAFKLFWAMT-EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA 257
+ A +F MT +N+V+WN+M++ +N RP + + F M G+ P+ + + S L
Sbjct: 234 ELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG 293
Query: 258 CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVAC 317
C L +L +H ++ L ++T +T+L+++Y K G L + K+F + K D VA
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAW 353
Query: 318 TAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSD 377
AM+SGYA HG +A+ F I + PD +TF +L AC+H+GLV+ G YF+ M
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
Query: 378 VYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGK 437
Y V+P+ DHY+CMVDLLGR G L +A +LI++MPF P++ V+G LLGA RV+ N+ + +
Sbjct: 414 DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAE 473
Query: 438 EAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKI 497
AAE L+ L+ + Y+ L+NIY++ W D A+VR MK + + PG S+IE NK+
Sbjct: 474 FAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKV 533
Query: 498 HRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIA 557
H F D HP+ D IHKKL+E+ K++ G+ E E LH+V EE K ++ HSEK+A
Sbjct: 534 HHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLA 593
Query: 558 LAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCG 617
+A+G + + + KNLRIC DCHK KF+S IEKR II+RD RFHHF DG CSCG
Sbjct: 594 VAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCG 653
Query: 618 DYW 620
DYW
Sbjct: 654 DYW 656
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P +S+ L+ S+L R IH V KS D L+S Y G DA L
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F+ M KD V+WN+++SG+++ G+ + +F M D + + +TF++V+ AC A
Sbjct: 342 FEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM-IDNKIRPDWITFVAVLLACNHAGL 400
Query: 163 REEGQ-YVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM 208
G Y +E Q ++++ G+ G ++ A KL +M
Sbjct: 401 VNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 151/350 (43%), Gaps = 46/350 (13%)
Query: 181 QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNS-MVAVCTQNGRPNEAINYFSMM 239
Q+ +N +I + G +D A ++F M +N ++WNS ++ + R EA F +
Sbjct: 60 QIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI 119
Query: 240 RLNGLFPDEATM-VSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR 298
P+ T +++ +C ++R + F ++ T++ Y++ G
Sbjct: 120 ------PEPDTFSYNIMLSC---YVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGE 170
Query: 299 LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA 358
+ + ++F + + ++V+ AM+SGY G +A FF+ G+ V +T +++
Sbjct: 171 MEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITG 226
Query: 359 CSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFE---P 415
+ V+ + F+ M+ V L ++ M+ D +L + M E P
Sbjct: 227 YMKAKKVELAEAMFKDMT----VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 416 N-SGVWGALLGAS--------RVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGL 466
N SG+ ALLG S R H I ++ AL L ++Y G
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS--------LISMYCKCGE 334
Query: 467 WSDAAKVRALMKTK-VLARNPGCS-FIEHGNK-----IHRFVVDDYSHPD 509
DA K+ +MK K V+A N S + +HGN + R ++D+ PD
Sbjct: 335 LGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 384
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/540 (36%), Positives = 319/540 (59%), Gaps = 6/540 (1%)
Query: 81 FIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD 140
F+ + L++ Y+ DA LFD+MP ++ +SW +++S +SK + + +M D
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 141 LDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
++ N T+ SV+ +C + + +HC +K G+E V V + LI+++ K G +
Sbjct: 157 -NVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 201 AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACET 260
A +F M + + WNS++ QN R + A+ F M+ G ++AT+ S+L+AC
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 261 LHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAM 320
L L L H + D+++ + L+++Y K G L + +VF ++ + D + + M
Sbjct: 273 LALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 321 LSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYG 380
+SG A +G EA++ FER G +P+++T +L ACSH+GL+++G +YF+ M +YG
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 381 VQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAA 440
+ P +HY CM+DLLG+ G L+DA +L+ M EP++ W LLGA RV N+ + + AA
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 441 ENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRF 500
+ +IALDP D Y +LSNIY+ S W ++R M+ + + + PGCS+IE +IH F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510
Query: 501 VVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAY 560
++ D SHP ++ KKL +++ ++ G+V ET +L D+ E + + HSEK+ALA+
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570
Query: 561 GLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
GL+ + + I KNLRIC DCH K S +E R+I+IRD R+HHF DG CSCGDYW
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 17/286 (5%)
Query: 46 PLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDE 105
P V T L+S + + R++H +IK D F+ L+ + +G DA +FDE
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 106 MPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
M D + WNS++ GF++ + +F MK + T SV+ AC E
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR-AGFIAEQATLTSVLRACTGLALLEL 278
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQ 225
G H VK +L + N L++MY K G ++ A ++F M E+++++W++M++ Q
Sbjct: 279 GMQAHVHIVKYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQAC-------ETLHLRRLVEAVHGVIFTCG 278
NG EA+ F M+ +G P+ T+V +L AC + + R ++ ++G+
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI----- 391
Query: 279 LDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSG 323
D +++L K G+L+ + K+ E+ +PD V +L
Sbjct: 392 -DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/609 (36%), Positives = 341/609 (55%), Gaps = 59/609 (9%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPD--------AQLLFDEMPNKDFVSWNSLV 118
IHA IKS RD ++ L AT D A +F++MP ++ SWN+++
Sbjct: 42 IHAVFIKSGQMRDTLAAAEI----LRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTII 97
Query: 119 SGFSKRGDLGNCMSV--FSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKL 176
GFS+ + +++ F M SD +E N TF SV+ ACA +EG+ +H A+K
Sbjct: 98 RGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKY 157
Query: 177 GMELQVKVVNTLINMYGKFGFVDSAFKLFW------------------------------ 206
G V++ L+ MY GF+ A LF+
Sbjct: 158 GFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDG 217
Query: 207 ---------------AMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATM 251
M ++++VSWN+M++ + NG +A+ F M+ + P+ T+
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 252 VSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK 311
VS+L A L L E +H G+ + + + L+++YSK G + + VF + +
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 312 PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHY 371
+ + +AM++G+A+HG +AI F + + G+ P V + +LL+ACSH GLV+EG+ Y
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 372 FQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYH 431
F M V G++PR++HY CMVDLLGR GLL++A+E I NMP +P+ +W ALLGA R+
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 432 NISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFI 491
N+ +GK A L+ + P D Y+ LSN+Y++ G WS+ +++R MK K + ++PGCS I
Sbjct: 458 NVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Query: 492 EHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNK 551
+ +H FVV+D SHP + +I+ L E+ K++ G+ T +L ++ EE K N+++
Sbjct: 518 DIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHY 577
Query: 552 HSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSD 611
HSEKIA A+GL+ ++ P+ I+KNLRIC DCH + K +S + KR I +RD KRFHHF D
Sbjct: 578 HSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQD 637
Query: 612 GLCSCGDYW 620
G CSC DYW
Sbjct: 638 GSCSCMDYW 646
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 55 LKSSSSLYCCRVIHARVIKSLDYR--DGFI--GDQLVSCYLNMGATPDAQLLFDEMPNKD 110
+K + L+ +I ++ D R DG I + ++ Y+ +G A++LFD+M +
Sbjct: 179 MKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRS 238
Query: 111 FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVH 170
VSWN+++SG+S G + + VF MK D+ N +T +SV+ A + + E G+++H
Sbjct: 239 VVSWNTMISGYSLNGFFKDAVEVFREMKKG-DIRPNYVTLVSVLPAISRLGSLELGEWLH 297
Query: 171 CCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPN 230
A G+ + + + LI+MY K G ++ A +F + +N+++W++M+ +G+
Sbjct: 298 LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAG 357
Query: 231 EAINYFSMMRLNGLFPDEATMVSLLQACETLHL----RRLVEAVHGVIFTCGLDENITIV 286
+AI+ F MR G+ P + ++LL AC L RR ++ GL+ I
Sbjct: 358 DAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ---MVSVDGLEPRIEHY 414
Query: 287 TTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHG 328
+++L + G L+ + + + KPD V A+L M G
Sbjct: 415 GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/579 (34%), Positives = 339/579 (58%), Gaps = 2/579 (0%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P D S +L A+ + +HA + + RD +G+Q++ Y + ++L
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FDEMP DFVS+N ++S +S+ + F M+ + + F +++S A +
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC-MGFDRRNFPFATMLSIAANLSS 366
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
+ G+ +HC A+ + + V N+L++MY K + A +F ++ ++ VSW ++++
Sbjct: 367 LQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISG 426
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
Q G + F+ MR + L D++T ++L+A + L + +H I G EN
Sbjct: 427 YVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLEN 486
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
+ + L+++Y+K G + + +VF E+ + V+ A++S +A +G G AI F + I
Sbjct: 487 VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLN 402
G++PD V+ +L+ACSH G V++G YFQ MS +YG+ P+ HY+CM+DLLGR G
Sbjct: 547 SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFA 606
Query: 403 DAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDP-SDPRNYIMLSNIY 461
+A++L+ MPFEP+ +W ++L A R++ N S+ + AAE L +++ D Y+ +SNIY
Sbjct: 607 EAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666
Query: 462 SASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVM 521
+A+G W V+ M+ + + + P S++E +KIH F +D +HP+ D+I +K+ E+
Sbjct: 667 AAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726
Query: 522 SKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICR 581
++I+ G+ +T S++ DV E++K + HSE++A+A+ L+ + P+V++KNLR CR
Sbjct: 727 AEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACR 786
Query: 582 DCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
DCH K +S I KR I +RD RFHHFS+G+CSCGDYW
Sbjct: 787 DCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 182/404 (45%), Gaps = 36/404 (8%)
Query: 57 SSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNS 116
S ++ R + AR+IK+ D + +V L G A+ ++DEMP+K+ VS N+
Sbjct: 25 SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 117 LVSGFSKRGDLGNCMSVFSVMKS-------------------DLDLEL------------ 145
++SG K GD+ + +F M D +L
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 146 -NELTFISVISACALAKAREEGQYVHCCAVKLGMELQ--VKVVNTLINMYGKFGFVDSAF 202
+ +TF +++ C A + VH AVKLG + + V N L+ Y + +D A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 203 KLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLH 262
LF + E++ V++N+++ ++G E+I+ F MR +G P + T +L+A LH
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 263 LRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLS 322
L + +H + T G + ++ +L+ YSK R+ + +F E+ + D V+ ++S
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 323 GYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQ 382
Y+ ++ FF G + + F +LS ++ + G+ + +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ-LHCQALLATAD 383
Query: 383 PRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
L + +VD+ +C + +A+ + K++P + + W AL+
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISG 426
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/575 (35%), Positives = 339/575 (58%), Gaps = 3/575 (0%)
Query: 48 VSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP 107
V +LL A + IH+ IK + F+ ++L+ Y G D Q +FD M
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
Query: 108 NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQ 167
+D +SWNS++ + +S+F M+ ++ + LT IS+ S + +
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAISLFQEMRLS-RIQPDCLTLISLASILSQLGDIRACR 368
Query: 168 YVHCCAVKLGMELQ-VKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
V ++ G L+ + + N ++ MY K G VDSA +F + +++SWN++++ QN
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 227 GRPNEAINYFSMMRLNG-LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
G +EAI +++M G + ++ T VS+L AC R +HG + GL ++ +
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
VT+L ++Y K GRL + +F +I + + V +++ + HG G +A+ F+ + EG+
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
+PDH+TF LLSACSHSGLVDEG+ F++M YG+ P L HY CMVD+ GR G L A
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 406 ELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASG 465
+ IK+M +P++ +WGALL A RV+ N+ +GK A+E+L ++P +++LSN+Y+++G
Sbjct: 609 KFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Query: 466 LWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQ 525
W ++R++ K L + PG S +E NK+ F + +HP ++++++L + +K++
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Query: 526 EFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHK 585
G+V + +L DV ++ K +++ HSE++A+A+ L+ + A + I KNLR+C DCH
Sbjct: 729 MIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHS 788
Query: 586 TAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
KF+S I +R II+RD+ RFHHF +G+CSCGDYW
Sbjct: 789 VTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 202/376 (53%), Gaps = 17/376 (4%)
Query: 59 SSLYCCR-VIHARVIKSLDYRDGFIGD-----QLVSCYLNMGATPDAQLLFDEMPNKDFV 112
S L CR VI I L + GF+ D L+ Y A +A++LFDEMP +D
Sbjct: 158 SVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG 217
Query: 113 SWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCC 172
SWN+++SG+ + G+ +++ + +++ ++ +T +S++SAC A G +H
Sbjct: 218 SWNAMISGYCQSGNAKEALTLSNGLRA-----MDSVTVVSLLSACTEAGDFNRGVTIHSY 272
Query: 173 AVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEA 232
++K G+E ++ V N LI++Y +FG + K+F M ++++SWNS++ N +P A
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332
Query: 233 INYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCG-LDENITIVTTLLN 291
I+ F MRL+ + PD T++SL L R +V G G E+ITI ++
Sbjct: 333 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 392
Query: 292 LYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG-MEPDHV 350
+Y+K+G ++++ VF + D ++ ++SGYA +G +EAI+ + EG + +
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 351 TFTHLLSACSHSGLVDEG-KHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIK 409
T+ +L ACS +G + +G K + +++ + G+ + + + D+ G+CG L DA L
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 410 NMPFEPNSGVWGALLG 425
+P NS W L+
Sbjct: 511 QIP-RVNSVPWNTLIA 525
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 154/306 (50%), Gaps = 9/306 (2%)
Query: 59 SSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLV 118
++L + +HAR++ S ++ I +LV+ Y +G A+ FD + N+D +WN ++
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 119 SGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGM 178
SG+ + G+ + FS+ L + TF SV+ AC + +G +HC A+K G
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGF 181
Query: 179 ELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSM 238
V V +LI++Y ++ V +A LF M ++M SWN+M++ Q+G EA+ +
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG 241
Query: 239 MRLNGLFPDEATMVSLLQAC-ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
+R D T+VSLL AC E R V +H GL+ + + L++LY++ G
Sbjct: 242 LRA----MDSVTVVSLLSACTEAGDFNRGV-TIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 298 RLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLS 357
RL KVF + D ++ +++ Y ++ AI F+ ++PD +T L S
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
Query: 358 ACSHSG 363
S G
Sbjct: 357 ILSQLG 362
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 341/574 (59%), Gaps = 1/574 (0%)
Query: 47 LVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
LV +L + ++ + H ++I+ D + + L++ Y G A+ +FD M
Sbjct: 63 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 166
+ VSWN+++ +++ + +F M+++ + +E T SV+SAC + E
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNE-GFKFSEFTISSVLSACGVNCDALEC 181
Query: 167 QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
+ +HC +VK ++L + V L+++Y K G + A ++F +M +++ V+W+SMVA QN
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIV 286
EA+ + + L ++ T+ S++ AC L + +H VI G N+ +
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 287 TTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGME 346
++ +++Y+K G L S +F+E+ + + ++SG+A H E + FE+ ++GM
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 347 PDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKE 406
P+ VTF+ LLS C H+GLV+EG+ +F++M YG+ P + HYSCMVD+LGR GLL++A E
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 407 LIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGL 466
LIK++PF+P + +WG+LL + RVY N+ + + AAE L L+P + N+++LSNIY+A+
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481
Query: 467 WSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQE 526
W + AK R L++ + + G S+I+ +K+H F V + HP +I L+ ++ K ++
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRK 541
Query: 527 FGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKT 586
FG+ E LHDV K ++ +HSEK+AL +GL+ P+ I+KNLRIC DCH+
Sbjct: 542 FGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEF 601
Query: 587 AKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
K S+ +R II+RD RFHHFSDG CSCGD+W
Sbjct: 602 MKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/554 (35%), Positives = 323/554 (58%), Gaps = 1/554 (0%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
IH+++IK+ + ++ L+ Y +G A + KD VSW ++++G+++
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNF 571
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
++ F M D + +E+ + +SACA +A +EGQ +H A G + N
Sbjct: 572 DDKALTTFRQML-DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
L+ +Y + G ++ ++ F + ++WN++V+ Q+G EA+ F M G+
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 247 DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF 306
+ T S ++A + + VH VI G D + L+++Y+K G ++ + K F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 307 AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
E+S ++V+ A+++ Y+ HG G+EA+ F++ I + P+HVT +LSACSH GLVD
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 367 EGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
+G YF+ M+ YG+ P+ +HY C+VD+L R GLL+ AKE I+ MP +P++ VW LL A
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Query: 427 SRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNP 486
V+ N+ IG+ AA +L+ L+P D Y++LSN+Y+ S W R MK K + + P
Sbjct: 871 CVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEP 930
Query: 487 GCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKT 546
G S+IE N IH F V D +HP +D+IH+ +++ + E G+V + S+L+++ E K
Sbjct: 931 GQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKD 990
Query: 547 NMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRF 606
++ HSEK+A+++GLL A +P+ ++KNLR+C DCH KFVS + R II+RDA RF
Sbjct: 991 PIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRF 1050
Query: 607 HHFSDGLCSCGDYW 620
HHF G CSC DYW
Sbjct: 1051 HHFEGGACSCKDYW 1064
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 200/430 (46%), Gaps = 7/430 (1%)
Query: 35 RFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMG 94
R H P +++L+VA + +L+ + +HA K + I L++ Y
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 95 ATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVI 154
A F E ++ V WN ++ + DL N +F M+ + ++ N+ T+ S++
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE-EIVPNQYTYPSIL 497
Query: 155 SACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMV 214
C E G+ +H +K +L V + LI+MY K G +D+A+ + +++V
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 557
Query: 215 SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVI 274
SW +M+A TQ ++A+ F M G+ DE + + + AC L + + +H
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 275 FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAI 334
G ++ L+ LYS+ G++ S F + D +A A++SG+ G EA+
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 335 QFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDL 394
+ F R REG++ ++ TF + A S + + +GK V++ G + + ++ +
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISM 736
Query: 395 LGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPR-N 453
+CG ++DA++ + N W A++ A Y G EA ++ + S+ R N
Sbjct: 737 YAKCGSISDAEKQFLEVS-TKNEVSWNAIINA---YSKHGFGSEALDSFDQMIHSNVRPN 792
Query: 454 YIMLSNIYSA 463
++ L + SA
Sbjct: 793 HVTLVGVLSA 802
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 194/428 (45%), Gaps = 16/428 (3%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P S++L A K SL +H V+K D ++ + LVS Y ++G A+ +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F M +D V++N+L++G S+ G M +F M D LE + T S++ AC+
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLASLVVACSADGT 404
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
GQ +H KLG K+ L+N+Y K +++A F +N+V WN M+
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
+ F M++ + P++ T S+L+ C L L E +H I N
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 524
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
+ + L+++Y+K+G+L+ + + + D V+ T M++GY + +A+ F + +
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLN 402
G+ D V T+ +SAC+ + EG+ + V G L + +V L RCG +
Sbjct: 585 RGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 403 DAKELIKNMPFEPNSG----VWGALLGASRVYHNISIGKEAAENLIALDPS--DPRNYIM 456
++ + FE W AL+ + N +EA + ++ D N+
Sbjct: 644 ESY-----LAFEQTEAGDNIAWNALVSGFQQSGN---NEEALRVFVRMNREGIDNNNFTF 695
Query: 457 LSNIYSAS 464
S + +AS
Sbjct: 696 GSAVKAAS 703
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 205/449 (45%), Gaps = 26/449 (5%)
Query: 1 MIRLIHAKFMTLTLSPRILHCLPTCCTLLSETSVRFHSISTY------------------ 42
+R + + F+ + PR L TL F +IS Y
Sbjct: 19 FLRSVSSSFIFIHGVPRKLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVENR 78
Query: 43 ---PRDPLVSTLLVA-LKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPD 98
P + LL LK++ SL R +H++++K +G + ++L YL G
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 99 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC- 157
A +FDEMP + +WN ++ + R +G +F M S+ ++ NE TF V+ AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSE-NVTPNEGTFSGVLEACR 197
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWN 217
+ A + + +H + G+ V N LI++Y + GFVD A ++F + ++ SW
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 218 SMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC 277
+M++ ++N EAI F M + G+ P S+L AC+ + + E +HG++
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFF 337
G + + L++LY +G L ++ +F+ +S+ D V +++G + G G +A++ F
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 338 ERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGR 397
+R +G+EPD T L+ ACS G + G+ + G +++L +
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 398 CGLLNDAKELIKNMPFEPNSGVWGALLGA 426
C + A + E N +W +L A
Sbjct: 437 CADIETALDYFLETEVE-NVVLWNVMLVA 464
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/577 (37%), Positives = 322/577 (55%), Gaps = 43/577 (7%)
Query: 51 LLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKD 110
+L A S ++ R IH K F+G+ LVS Y G +A+L+ DEM +D
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205
Query: 111 FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVH 170
VSWNSLV G+++ + + V M+S + + + T S++ A
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMES-VKISHDAGTMASLLPA-------------- 250
Query: 171 CCAVKLGMELQVKVVNTLIN--MYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGR 228
V NT MY K +F+ M ++++VSWN M+ V +N
Sbjct: 251 -------------VSNTTTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAM 289
Query: 229 PNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTT 288
P EA+ +S M +G PD ++ S+L AC L + +HG I L N+ +
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349
Query: 289 LLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPD 348
L+++Y+K G L + VF + D V+ TAM+S Y G G +A+ F + G+ PD
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409
Query: 349 HVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELI 408
+ F L+ACSH+GL++EG+ F++M+D Y + PRL+H +CMVDLLGR G + +A I
Sbjct: 410 SIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFI 469
Query: 409 KNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWS 468
++M EPN VWGALLGA RV+ + IG AA+ L L P Y++LSNIY+ +G W
Sbjct: 470 QDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWE 529
Query: 469 DAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFG 528
+ +R +MK+K L +NPG S +E IH F+V D SHP SD+I+++L+ ++ K++E G
Sbjct: 530 EVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELG 589
Query: 529 FVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSA-----ADMPLVIIKNLRICRDC 583
+V ++ES LHDV EE K + HSEK+A+ + L+ + ++ + I KNLRIC DC
Sbjct: 590 YVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDC 649
Query: 584 HKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
H AK +S I R IIIRD RFH F G+CSCGDYW
Sbjct: 650 HVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 239 MRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR 298
+ L+ P E T+ L Q +T R + VH I L N ++ L+ Y+ +
Sbjct: 31 LELDQKSPQE-TVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKD 89
Query: 299 LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA 358
+ ++ KVF EI + + + M+ Y +G E ++ F + PDH TF +L A
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 359 CSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
CS SG + G+ + V G+ L + +V + G+CG L++A+ ++ M
Sbjct: 150 CSCSGTIVIGRKIHGSATKV-GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 106/212 (50%), Gaps = 9/212 (4%)
Query: 48 VSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP 107
++++L A +S+L + IH + + + + + L+ Y G A+ +F+ M
Sbjct: 312 ITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK 371
Query: 108 NKDFVSWNSLVS--GFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
++D VSW +++S GFS RG + +++FS ++ D L + + F++ ++AC+ A EE
Sbjct: 372 SRDVVSWTAMISAYGFSGRG--CDAVALFSKLQ-DSGLVPDSIAFVTTLAACSHAGLLEE 428
Query: 166 GQY-VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSMVAVC 223
G+ + +++ + ++++ G+ G V A++ M+ E N W +++ C
Sbjct: 429 GRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGAC 488
Query: 224 TQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
+ + I + +L L P+++ LL
Sbjct: 489 RVHSDTD--IGLLAADKLFQLAPEQSGYYVLL 518
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/584 (35%), Positives = 341/584 (58%), Gaps = 10/584 (1%)
Query: 46 PLVSTLLVALKSS--SSLYCCRVIHARVIK-SLDYRDGFIGDQLVSCYLNMGATPD---A 99
P+V + L++ SS+ R IHA I+ + D +G L+ +++ + P A
Sbjct: 13 PMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYA 72
Query: 100 QLLFD--EMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 157
+F E P F+ WN+L+ G+++ G+ + S++ M+ +E + T+ +I A
Sbjct: 73 HKVFSKIEKPINVFI-WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWN 217
G+ +H ++ G + V N+L+++Y G V SA+K+F M E+++V+WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 218 SMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC 277
S++ +NG+P EA+ ++ M G+ PD T+VSLL AC + L + VH +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFF 337
GL N+ LL+LY++ GR+ + +F E+ + V+ T+++ G A++G G EAI+ F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 338 ER-TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLG 396
+ EG+ P +TF +L ACSH G+V EG YF+ M + Y ++PR++H+ CMVDLL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 397 RCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIM 456
R G + A E IK+MP +PN +W LLGA V+ + + + A ++ L+P+ +Y++
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 457 LSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKK 516
LSN+Y++ WSD K+R M + + PG S +E GN++H F++ D SHP SD I+ K
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 517 LEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKN 576
L+E+ +++ G+V + ++ DV EE K N V HSEKIA+A+ L+ + P+ ++KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 577 LRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
LR+C DCH K VS + R I++RD RFHHF +G CSC DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/591 (36%), Positives = 328/591 (55%), Gaps = 36/591 (6%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGAT---PDAQLLFDEMPNKDFVSWNSLVSGF 121
+ IHAR++K+ +D + + +S ++ ++ P AQ++FD D WN ++ GF
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 122 SKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQ 181
S + + ++ M N TF S++ AC+ A EE +H KLG E
Sbjct: 91 SCSDEPERSLLLYQRMLCS-SAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149
Query: 182 VKVVNTLINMYG-------------------------------KFGFVDSAFKLFWAMTE 210
V VN+LIN Y K G +D A LF M E
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 211 QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAV 270
+N +SW +M++ Q EA+ F M+ + + PD ++ + L AC L + +
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 271 HGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCG 330
H + + + + L+++Y+K G + + +VF I K A TA++SGYA HG G
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Query: 331 TEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC 390
EAI F + G++P+ +TFT +L+ACS++GLV+EGK F M Y ++P ++HY C
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 391 MVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSD 450
+VDLLGR GLL++AK I+ MP +PN+ +WGALL A R++ NI +G+E E LIA+DP
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYH 449
Query: 451 PRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDS 510
Y+ +NI++ W AA+ R LMK + +A+ PGCS I H F+ D SHP+
Sbjct: 450 GGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEI 509
Query: 511 DKIHKKLEEVMSKIQEFGFVSETESILHD-VAEEIKTNMVNKHSEKIALAYGLLVSAADM 569
+KI K + K++E G+V E E +L D V ++ + +V++HSEK+A+ YGL+ +
Sbjct: 510 EKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGT 569
Query: 570 PLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+ I+KNLR+C+DCHK K +S I KR I++RD RFHHF DG CSCGDYW
Sbjct: 570 IIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 152/326 (46%), Gaps = 44/326 (13%)
Query: 37 HSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGAT 96
H+ T+P +LL A + S+ IHA++ K D + + L++ Y G
Sbjct: 113 HNAYTFP------SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNF 166
Query: 97 PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM----------------KSD 140
A LLFD +P D VSWNS++ G+ K G + +++F M ++D
Sbjct: 167 KLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQAD 226
Query: 141 L--------------DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ D+E + ++ + +SACA A E+G+++H K + + +
Sbjct: 227 MNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGC 286
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
LI+MY K G ++ A ++F + ++++ +W ++++ +G EAI+ F M+ G+ P
Sbjct: 287 VLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP 346
Query: 247 DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTT----LLNLYSKIGRLNAS 302
+ T ++L AC LVE + ++ D N+ +++L + G L+ +
Sbjct: 347 NVITFTAVLTACS---YTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 403
Query: 303 CKVFAEIS-KPDKVACTAMLSGYAMH 327
+ E+ KP+ V A+L +H
Sbjct: 404 KRFIQEMPLKPNAVIWGALLKACRIH 429
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/578 (36%), Positives = 322/578 (55%), Gaps = 11/578 (1%)
Query: 48 VSTLLVALKSSSSLYCCRV---IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFD 104
+TLL L + + L R+ IH+ K+ Y ++ +S Y G LF
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR 280
Query: 105 EMPNKDFVSWNSLVSGFSKRGDLGNCMSVF-SVMKSDLDLELNEL-TFISVISACALAKA 162
E D V++N+++ G++ G+ +S+F +M S L + L + + V L A
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA 340
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
+H +K V L +Y K ++SA KLF E+++ SWN+M++
Sbjct: 341 ------IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
TQNG +AI+ F M+ + P+ T+ +L AC L L + VH ++ + + +
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
I + T L+ +Y+K G + + ++F ++K ++V M+SGY +HG G EA+ F +
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLN 402
G+ P VTF +L ACSH+GLV EG F M YG +P + HY+CMVD+LGR G L
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 403 DAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYS 462
A + I+ M EP S VW LLGA R++ + ++ + +E L LDP + +++LSNI+S
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 463 ASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMS 522
A + AA VR K + LA+ PG + IE G H F D SHP +I++KLE++
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 694
Query: 523 KIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRD 582
K++E G+ ETE LHDV EE + MV HSE++A+A+GL+ + + IIKNLR+C D
Sbjct: 695 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 754
Query: 583 CHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
CH K +S I +R I++RDA RFHHF DG+CSCGDYW
Sbjct: 755 CHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 181/400 (45%), Gaps = 8/400 (2%)
Query: 30 SETSVRFHSISTYPRDPLVSTLLVALKSSSSLY---CCRVIHARVIKSLDYRDGFIGDQL 86
S SV H + P ST A+ ++S RVIH + + + +G +
Sbjct: 101 SSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNI 160
Query: 87 VSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELN 146
V Y DA+ +FD MP KD + WN+++SG+ K + VF + ++ L+
Sbjct: 161 VKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLD 220
Query: 147 ELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFW 206
T + ++ A A + G +H A K G V+ I++Y K G + LF
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR 280
Query: 207 AMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRL 266
+ ++V++N+M+ T NG +++ F + L+G +T+VSL+ L L
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL---ML 337
Query: 267 VEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAM 326
+ A+HG + ++ T L +YSK+ + ++ K+F E + + AM+SGY
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 327 HGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLD 386
+G +AI F + P+ VT T +LSAC+ G + GK ++ + +
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST-DFESSIY 456
Query: 387 HYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
+ ++ + +CG + +A+ L M + N W ++
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISG 495
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 210/497 (42%), Gaps = 53/497 (10%)
Query: 22 LPTCCTLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGF 81
L T + +ET+ S +TY L K S+S+ HA++I D
Sbjct: 3 LRTVSSATAETTAALISKNTY---------LDFFKRSTSISHLAQTHAQIILHGFRNDIS 53
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
+ +L ++GA A+ +F + D +N L+ GFS + +SVF+ ++
Sbjct: 54 LLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKST 113
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
DL+ N T+ ISA + + G+ +H AV G + ++ + + ++ MY KF V+ A
Sbjct: 114 DLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDA 173
Query: 202 FKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYF------SMMRLNGLFPDEATMVSLL 255
K+F M E++ + WN+M++ +N E+I F S RL D T++ +L
Sbjct: 174 RKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL-----DTTTLLDIL 228
Query: 256 QACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKV 315
A L RL +H + G + ++T ++LYSK G++ +F E KPD V
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIV 288
Query: 316 ACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHY---- 371
A AM+ GY +G ++ F+ + G T L+ H L+ Y
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKS 348
Query: 372 ---------------FQVMSDVYGVQPRLDH--------YSCMVDLLGRCGLLNDAKELI 408
+ ++++ + D ++ M+ + GL DA L
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 409 KNM---PFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYI--MLSNIYSA 463
+ M F PN +L A +S+GK +L+ + Y+ L +Y+
Sbjct: 409 REMQKSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRSTDFESSIYVSTALIGMYAK 467
Query: 464 SGLWSDAAKVRALMKTK 480
G ++A ++ LM K
Sbjct: 468 CGSIAEARRLFDLMTKK 484
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/590 (34%), Positives = 343/590 (58%), Gaps = 9/590 (1%)
Query: 39 ISTYPRDPL-VSTLLVALKSSSSLYCCRVIHARVIKS--LDYRDGFIGDQLVSCYLNMGA 95
+S + D +S++ A +L + +H+ I+S +D + + D C + G+
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSAD-GS 320
Query: 96 TPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN-CMSVFSVMKSDLDLELNELTFISVI 154
D + +FD M + +SW +L++G+ K +L +++FS M + +E N TF S
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 155 SACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMV 214
AC G+ V A K G+ V N++I+M+ K ++ A + F +++E+N+V
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV 440
Query: 215 SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVI 274
S+N+ + +N +A S + L T SLL + R E +H +
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV 500
Query: 275 FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAI 334
GL N + L+++YSK G ++ + +VF + + ++ T+M++G+A HG +
Sbjct: 501 VKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVL 560
Query: 335 QFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDL 394
+ F + I EG++P+ VT+ +LSACSH GLV EG +F M + + ++P+++HY+CMVDL
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDL 620
Query: 395 LGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNY 454
L R GLL DA E I MPF+ + VW LGA RV+ N +GK AA ++ LDP++P Y
Sbjct: 621 LCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAY 680
Query: 455 IMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIH 514
I LSNIY+ +G W ++ ++R MK + L + GCS+IE G+KIH+F V D +HP++ +I+
Sbjct: 681 IQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIY 740
Query: 515 KKLEEVMSKIQEFGFVSETESILHDV----AEEIKTNMVNKHSEKIALAYGLLVSAADMP 570
+L+ ++++I+ G+V +T+ +LH + E K ++ +HSEKIA+A+GL+ ++ P
Sbjct: 741 DELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRP 800
Query: 571 LVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+ + KNLR+C DCH K++S + R I++RD RFHHF DG CSC DYW
Sbjct: 801 VRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 173/332 (52%), Gaps = 18/332 (5%)
Query: 43 PRDPLV-STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
P D + S+LL + + +++HAR+I+ D + + L+S Y G + A+
Sbjct: 59 PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 102 LFDEM---PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 158
+F+ M +D VSW+++++ + G + + VF V +L L N+ + +VI AC+
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVF-VEFLELGLVPNDYCYTAVIRACS 177
Query: 159 LAKAREEGQYVHCCAVKLG-MELQVKVVNTLINMY--GKFGFVDSAFKLFWAMTEQNMVS 215
+ G+ +K G E V V +LI+M+ G+ F ++A+K+F M+E N+V+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF-ENAYKVFDKMSELNVVT 236
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
W M+ C Q G P EAI +F M L+G D+ T+ S+ AC L L + +H
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 276 TCGLDENITIVTTLLNLYSKI---GRLNASCKVFAEISKPDKVACTAMLSGYAMHGC--G 330
GL +++ +L+++Y+K G ++ KVF + ++ TA+++GY M C
Sbjct: 297 RSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY-MKNCNLA 353
Query: 331 TEAIQFFERTIREG-MEPDHVTFTHLLSACSH 361
TEAI F I +G +EP+H TF+ AC +
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 169/359 (47%), Gaps = 24/359 (6%)
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
GDL +S +M D ++ +TF S++ +C A+ G+ VH ++ +E +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMT---EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRL 241
N+LI++Y K G A +F M ++++VSW++M+A NGR +AI F
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 242 NGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCG-LDENITIVTTLLNLYSK-IGRL 299
GL P++ ++++AC + G + G + ++ + +L++++ K
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 300 NASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSAC 359
+ KVF ++S+ + V T M++ G EAI+FF + G E D T + + SAC
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 360 SHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSC-MVDLLGRC---GLLNDAKELIKNMPF 413
+ + GK H + + S + +D C +VD+ +C G ++D +++ M
Sbjct: 280 AELENLSLGKQLHSWAIRSGL------VDDVECSLVDMYAKCSADGSVDDCRKVFDRME- 332
Query: 414 EPNSGVWGALLGASRVYHNISIGKEAAE---NLIALDPSDPRNYIMLSNIYSASGLWSD 469
+ + W AL+ + N ++ EA +I +P N+ S+ + A G SD
Sbjct: 333 DHSVMSWTALI--TGYMKNCNLATEAINLFSEMITQGHVEP-NHFTFSSAFKACGNLSD 388
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 335/581 (57%), Gaps = 5/581 (0%)
Query: 44 RDPLVSTLLVAL--KSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
+ PL +L L SSS + IHA V+++ + QL+ + +G A+
Sbjct: 5 QTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQ 64
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+FDEM WN+L G+ + + ++ M+ DL + +E T+ V+ A +
Sbjct: 65 VFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMR-DLGVRPDEFTYPFVVKAISQLG 123
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
G +H VK G V L+ MY KFG + SA LF +M +++V+WN+ +A
Sbjct: 124 DFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA 183
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
VC Q G A+ YF+ M + + D T+VS+L AC L + E ++ +D
Sbjct: 184 VCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC 243
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
NI + L+++ K G A+ +F E+ + + V+ + M+ GYAM+G EA+ F
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVM--SDVYGVQPRLDHYSCMVDLLGRCG 399
EG+ P++VTF +LSACSH+GLV+EGK YF +M S+ ++PR +HY+CMVDLLGR G
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSG 363
Query: 400 LLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSN 459
LL +A E IK MP EP++G+WGALLGA V+ ++ +G++ A+ L+ P +++LSN
Sbjct: 364 LLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSN 423
Query: 460 IYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEE 519
IY+A+G W KVR+ M+ + S +E KIH F D SHP S I++KL+E
Sbjct: 424 IYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDE 483
Query: 520 VMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRI 579
++ KI++ G+V +T S+ HDV E K ++ HSEK+A+A+GL+ P+ ++KNLR
Sbjct: 484 ILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRT 543
Query: 580 CRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
C DCH +KFVS + II+RD RFHHF +G+CSC ++W
Sbjct: 544 CDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/589 (36%), Positives = 333/589 (56%), Gaps = 5/589 (0%)
Query: 33 SVRFHSISTYPRD-PLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYL 91
S+R H + + PLV L A +SS +H+ V+K D L+S Y
Sbjct: 101 SIRKHGLYLHGFTFPLV---LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYS 157
Query: 92 NMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFI 151
G DA LFDE+P++ V+W +L SG++ G + +F M ++ ++ + +
Sbjct: 158 GSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKM-VEMGVKPDSYFIV 216
Query: 152 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
V+SAC + G+++ ++ M+ V TL+N+Y K G ++ A +F +M E+
Sbjct: 217 QVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEK 276
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVH 271
++V+W++M+ N P E I F M L PD+ ++V L +C +L L E
Sbjct: 277 DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGI 336
Query: 272 GVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGT 331
+I N+ + L+++Y+K G + +VF E+ + D V A +SG A +G
Sbjct: 337 SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVK 396
Query: 332 EAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCM 391
+ F +T + G+ PD TF LL C H+GL+ +G +F +S VY ++ ++HY CM
Sbjct: 397 LSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCM 456
Query: 392 VDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDP 451
VDL GR G+L+DA LI +MP PN+ VWGALL R+ + + + + LIAL+P +
Sbjct: 457 VDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNA 516
Query: 452 RNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSD 511
NY+ LSNIYS G W +AA+VR +M K + + PG S+IE K+H F+ DD SHP SD
Sbjct: 517 GNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSD 576
Query: 512 KIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPL 571
KI+ KLE++ ++++ GFV TE + DV EE K ++ HSEK+A+A GL+ + +
Sbjct: 577 KIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVI 636
Query: 572 VIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
++KNLR+C DCH+ K +S I +R I++RD RFH F++G CSC DYW
Sbjct: 637 RVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 182/370 (49%), Gaps = 6/370 (1%)
Query: 46 PLVSTLLVALKSSSSLYCC----RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
P ++ + +K+ S+ C + IH +I + D F+ + L+ L T + L
Sbjct: 7 PSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYL 66
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
LF + +NSL++GF + +F ++ L L+ TF V+ AC A
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKH-GLYLHGFTFPLVLKACTRAS 125
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
+R+ G +H VK G V + +L+++Y G ++ A KLF + ++++V+W ++ +
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
T +GR EAI+ F M G+ PD +V +L AC + E + + + +
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
N + TTL+NLY+K G++ + VF + + D V + M+ GYA + E I+ F + +
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
+E ++PD + LS+C+ G +D G+ ++ D + L + ++D+ +CG +
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLI-DRHEFLTNLFMANALIDMYAKCGAM 364
Query: 402 NDAKELIKNM 411
E+ K M
Sbjct: 365 ARGFEVFKEM 374
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 154/328 (46%), Gaps = 16/328 (4%)
Query: 149 TFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM 208
T ISV AC + ++ +H + + +VN L+ F ++ LF
Sbjct: 18 TLISV--ACTVNHLKQ----IHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHT 71
Query: 209 TEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVE 268
N+ +NS++ N +E ++ F +R +GL+ T +L+AC R+L
Sbjct: 72 QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 269 AVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHG 328
+H ++ CG + ++ +T+LL++YS GRLN + K+F EI V TA+ SGY G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 329 CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY 388
EAI F++ + G++PD +LSAC H G +D G+ + M ++ +Q
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME-MQKNSFVR 250
Query: 389 SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDP 448
+ +V+L +CG + A+ + +M E + W ++ Y + S KE E + +
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG---YASNSFPKEGIELFLQMLQ 306
Query: 449 SDPRNYIMLSNIYSASGLWSDAAKVRAL 476
+ + + +S G S A + AL
Sbjct: 307 ENLK-----PDQFSIVGFLSSCASLGAL 329
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 334/574 (58%), Gaps = 5/574 (0%)
Query: 50 TLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNK 109
LL A +L + +HA +IK+ ++ +L+ Y DA+ + DEMP K
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
+ VSW +++S +S+ G ++VF+ M D + NE TF +V+++C A G+ +
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRS-DGKPNEFTFATVLTSCIRASGLGLGKQI 175
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRP 229
H VK + + V ++L++MY K G + A ++F + E+++VS +++A Q G
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 230 NEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTL 289
EA+ F + G+ P+ T SLL A L L + H + L + +L
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295
Query: 290 LNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG--MEP 347
+++YSK G L+ + ++F + + ++ AML GY+ HG G E ++ F R +R+ ++P
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF-RLMRDEKRVKP 354
Query: 348 DHVTFTHLLSACSHSGLVDEGKHYFQVM-SDVYGVQPRLDHYSCMVDLLGRCGLLNDAKE 406
D VT +LS CSH + D G + F M + YG +P +HY C+VD+LGR G +++A E
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 407 LIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGL 466
IK MP +P +GV G+LLGA RV+ ++ IG+ LI ++P + NY++LSN+Y+++G
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 467 WSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQE 526
W+D VRA+M K + + PG S+I+H +H F +D +HP +++ K++E+ K+++
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Query: 527 FGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKT 586
G+V + +L+DV EE K M+ HSEK+AL +GL+ + +P+ + KNLRIC DCH
Sbjct: 535 AGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNF 594
Query: 587 AKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
AK S + +R + +RD RFH DG+CSCGDYW
Sbjct: 595 AKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 329/558 (58%), Gaps = 6/558 (1%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+HA +I + R + +L++ + A LLF +P D +NS++ SK
Sbjct: 28 VHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRL 87
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+C++ + M S ++ + TF SVI +CA A G+ VHC AV G L V
Sbjct: 88 PLHCVAYYRRMLSS-NVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQA 146
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
L+ Y K G ++ A ++F M E+++V+WNS+V+ QNG +EAI F MR +G P
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 247 DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF 306
D AT VSLL AC L VH I + GLD N+ + T L+NLYS+ G + + +VF
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 307 AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE-GMEPDHVTFTHLLSACSHSGLV 365
++ + + A TAM+S Y HG G +A++ F + + G P++VTF +LSAC+H+GLV
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 366 DEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNS---GVWGA 422
+EG+ ++ M+ Y + P ++H+ CMVD+LGR G L++A + I + + +W A
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTA 386
Query: 423 LLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVL 482
+LGA +++ N +G E A+ LIAL+P +P +++MLSNIY+ SG + + +R M L
Sbjct: 387 MLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNL 446
Query: 483 ARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAE 542
+ G S IE NK + F + D SH ++ +I++ LE ++S+ +E G+ +E ++H V E
Sbjct: 447 RKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEE 506
Query: 543 EIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRD 602
E K + HSEK+A+A+GLL D+ + I+KNLRIC DCH K++S++ R I +RD
Sbjct: 507 EEKEFALRYHSEKLAVAFGLL-KTVDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRD 565
Query: 603 AKRFHHFSDGLCSCGDYW 620
RFHHF +G CSC DYW
Sbjct: 566 KLRFHHFQNGSCSCLDYW 583
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 168/364 (46%), Gaps = 33/364 (9%)
Query: 30 SETSVRFHSISTYPR------DPLVSTLLVALKSSSSLYCCRV---IHARVIKSLDYRDG 80
S+ + H ++ Y R P T +KS + L R+ +H + S D
Sbjct: 83 SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDT 142
Query: 81 FIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD 140
++ LV+ Y G A+ +FD MP K V+WNSLVSGF + G + VF M+
Sbjct: 143 YVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRES 202
Query: 141 LDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
E + TF+S++SACA A G +VH + G++L VK+ LIN+Y + G V
Sbjct: 203 -GFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 201 AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLN-GLFPDEATMVSLLQACE 259
A ++F M E N+ +W +M++ +G +A+ F+ M + G P+ T V++L AC
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 260 TLHLRRLVEAVHGVI-----FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDK 314
L +V+ + G++ ++ +V L + G L+ + K ++ K
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDML----GRAGFLDEAYKFIHQLDATGK 377
Query: 315 VAC----TAMLSGYAMHGCGTEAIQFFERTIREGMEPD----HVTFTHLLSACSHSGLVD 366
TAML MH ++ +R I +EPD HV +++ + SG D
Sbjct: 378 ATAPALWTAMLGACKMHRNYDLGVEIAKRLI--ALEPDNPGHHVMLSNIYAL---SGKTD 432
Query: 367 EGKH 370
E H
Sbjct: 433 EVSH 436
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/562 (36%), Positives = 324/562 (57%), Gaps = 18/562 (3%)
Query: 67 IHARVIKSLDYRDGFIGDQ-----LVSCYLNMGATPDAQLLFDEMP-NKDFVSWNSLVSG 120
+H V+K GF+ DQ L+ Y A DA LF E+ + VSW +++SG
Sbjct: 317 LHCSVVKY-----GFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Query: 121 FSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMEL 180
F + + +FS MK + NE T+ +++A + E VH VK E
Sbjct: 372 FLQNDGKEEAVDLFSEMKRK-GVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYER 426
Query: 181 QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMR 240
V L++ Y K G V+ A K+F + ++++V+W++M+A Q G AI F +
Sbjct: 427 SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT 486
Query: 241 LNGLFPDEATMVSLLQACETLHLRR-LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRL 299
G+ P+E T S+L C + + HG LD ++ + + LL +Y+K G +
Sbjct: 487 KGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNI 546
Query: 300 NASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSAC 359
++ +VF + D V+ +M+SGYA HG +A+ F+ + ++ D VTF + +AC
Sbjct: 547 ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606
Query: 360 SHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGV 419
+H+GLV+EG+ YF +M + P +H SCMVDL R G L A ++I+NMP S +
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI 666
Query: 420 WGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKT 479
W +L A RV+ +G+ AAE +IA+ P D Y++LSN+Y+ SG W + AKVR LM
Sbjct: 667 WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 726
Query: 480 KVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHD 539
+ + + PG S+IE NK + F+ D SHP D+I+ KLE++ +++++ G+ +T +L D
Sbjct: 727 RNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQD 786
Query: 540 VAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTII 599
+ +E K ++ +HSE++A+A+GL+ + PL+IIKNLR+C DCH K ++ IE+R I+
Sbjct: 787 IDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIV 846
Query: 600 IRDAKRFHHF-SDGLCSCGDYW 620
+RD+ RFHHF SDG+CSCGD+W
Sbjct: 847 VRDSNRFHHFSSDGVCSCGDFW 868
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 2/295 (0%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R +H + IK D +G LV Y+ D + +FDEM ++ V+W +L+SG+++
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
+++F M+++ + N TF + + A G VH VK G++ + V
Sbjct: 173 SMNDEVLTLFMRMQNE-GTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
N+LIN+Y K G V A LF +++V+WNSM++ NG EA+ F MRLN +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
E++ S+++ C L R E +H + G + I T L+ YSK + + +
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 305 VFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA 358
+F EI + V+ TAM+SG+ + EA+ F R+G+ P+ T++ +L+A
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 161/352 (45%), Gaps = 14/352 (3%)
Query: 98 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 157
+A LFD+ P +D S+ SL+ GFS+ G +F + L +E++ F SV+
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR-LGMEMDCSIFSSVLKVS 103
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWN 217
A G+ +HC +K G V V +L++ Y K K+F M E+N+V+W
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWT 163
Query: 218 SMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ--ACETLHLRRLVEAVHGVIF 275
++++ +N +E + F M+ G P+ T + L A E + R L VH V+
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL--QVHTVVV 221
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
GLD+ I + +L+NLY K G + + +F + V +M+SGYA +G EA+
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV--YGVQPRLDHYSCMVD 393
F + +F ++ C++ + E + Q+ V YG + + ++
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCAN---LKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 394 LLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIA 445
+C + DA L K + N W A++ S N GKE A +L +
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMI--SGFLQN--DGKEEAVDLFS 386
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 6/219 (2%)
Query: 195 FGFVDS-----AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
FG V S A LF ++ S+ S++ +++GR EA F + G+ D +
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
S+L+ TL +H G +++++ T+L++ Y K KVF E+
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 310 SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
+ + V T ++SGYA + E + F R EG +P+ TF L + G+ G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 370 HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELI 408
V+ G+ + + +++L +CG + A+ L
Sbjct: 215 QVHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILF 252
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/532 (36%), Positives = 317/532 (59%), Gaps = 17/532 (3%)
Query: 94 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
G +A+ +FDEM + ++W ++V+G+ + + + +F VM E E+++ S+
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP-----EKTEVSWTSM 240
Query: 154 ISACALAKAREEGQYVHCCAVKLGMELQVKVV---NTLINMYGKFGFVDSAFKLFWAMTE 210
+ E+ + +L + VK V N +I+ G+ G + A ++F +M E
Sbjct: 241 LMGYVQNGRIEDAE-------ELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKE 293
Query: 211 QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAV 270
+N SW +++ + +NG EA++ F +M+ G+ P T++S+L C +L + V
Sbjct: 294 RNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQV 353
Query: 271 HGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCG 330
H + C D ++ + + L+ +Y K G L S +F D + +++SGYA HG G
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413
Query: 331 TEAIQFF-ERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS 389
EA++ F E + +P+ VTF LSACS++G+V+EG ++ M V+GV+P HY+
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 390 CMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPS 449
CMVD+LGR G N+A E+I +M EP++ VWG+LLGA R + + + + A+ LI ++P
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPE 533
Query: 450 DPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDY-SHP 508
+ YI+LSN+Y++ G W+D A++R LMKT+++ ++PGCS+ E NK+H F SHP
Sbjct: 534 NSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHP 593
Query: 509 DSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAAD 568
+ + I K L+E+ ++E G+ + LHDV EE K N + HSE++A+AY LL +
Sbjct: 594 EQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEG 653
Query: 569 MPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+P+ ++KNLR+C DCH K +S +++R II+RDA RFHHF +G CSC DYW
Sbjct: 654 IPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 144/341 (42%), Gaps = 89/341 (26%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL 143
+ +V+ Y DA+ LFDEMP+++ +SWN LVSG+ K G++ VF +M
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER--- 108
Query: 144 ELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFK 203
+V+S AL K YVH G VD A
Sbjct: 109 --------NVVSWTALVKG-----YVHN------------------------GKVDVAES 131
Query: 204 LFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHL 263
LFW M E+N VSW M+ Q+GR ++A + M+ PD+ +
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI------PDKDNIAR---------- 175
Query: 264 RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSG 323
T++++ K GR++ + ++F E+S+ + T M++G
Sbjct: 176 -----------------------TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTG 212
Query: 324 YAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQP 383
Y + +A + F+ E V++T +L +G +++ + F+VM V+P
Sbjct: 213 YGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP----VKP 264
Query: 384 RLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+ + M+ LG+ G + A+ + +M E N W ++
Sbjct: 265 VI-ACNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI 303
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P P + ++L S +SL+ + +HA++++ D ++ L++ Y+ G ++L+
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD P+KD + WNS++SG++ G + VF M + NE+TF++ +SAC+ A
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 163 REEGQYVH-CCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSMV 220
EEG ++ G++ +++M G+ G + A ++ +MT E + W S++
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 221 AVC 223
C
Sbjct: 509 GAC 511
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 24/294 (8%)
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
N I + G + A KLF + +++ SWNSMVA N P +A F M +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
+ ++ E R+ +F + N+ T L+ Y G+++ + +
Sbjct: 81 SWNGLVSGYMKNGEIDEARK--------VFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
F ++ + +KV+ T ML G+ G +A + +E + D++ T ++ G V
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEGRV 188
Query: 366 DEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLG 425
DE + F MS+ + ++ MV G+ ++DA+++ MP E W ++L
Sbjct: 189 DEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLM 242
Query: 426 ASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKT 479
N I E AE L + P P I + + S G + AK R + +
Sbjct: 243 G--YVQNGRI--EDAEELFEVMPVKP--VIACNAMISGLGQKGEIAKARRVFDS 290
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/557 (35%), Positives = 314/557 (56%), Gaps = 2/557 (0%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R++H V+ S + + IG+ LVS Y +G +++ + +MP +D V+WN+L+ G+++
Sbjct: 382 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 441
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACAL-AKAREEGQYVHCCAVKLGMELQVK 183
D ++ F M+ + + N +T +SV+SAC L E G+ +H V G E
Sbjct: 442 EDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 500
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG 243
V N+LI MY K G + S+ LF + +N+++WN+M+A +G E + S MR G
Sbjct: 501 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 560
Query: 244 LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
+ D+ + L A L + + +HG+ G + + I ++YSK G +
Sbjct: 561 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 620
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
K+ + ++S HG E F + G++P HVTF LL+ACSH G
Sbjct: 621 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 680
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGAL 423
LVD+G Y+ +++ +G++P ++H C++DLLGR G L +A+ I MP +PN VW +L
Sbjct: 681 LVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 740
Query: 424 LGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLA 483
L + +++ N+ G++AAENL L+P D Y++ SN+++ +G W D VR M K +
Sbjct: 741 LASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 800
Query: 484 RNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEE 543
+ CS+++ +K+ F + D +HP + +I+ KLE++ I+E G+V++T L D EE
Sbjct: 801 KKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEE 860
Query: 544 IKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDA 603
K + + HSE++ALAY L+ + + I KNLRIC DCH KFVS + R I++RD
Sbjct: 861 QKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQ 920
Query: 604 KRFHHFSDGLCSCGDYW 620
RFHHF GLCSC DYW
Sbjct: 921 YRFHHFERGLCSCKDYW 937
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 227/466 (48%), Gaps = 36/466 (7%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRV-IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
P ++++L+ A S S++ V +H V KS D ++ ++ Y G ++
Sbjct: 56 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 115
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+F+EMP+++ VSW SL+ G+S +G+ + ++ M+ + + NE + VIS+C L K
Sbjct: 116 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLK 174
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
G+ + VK G+E ++ V N+LI+M G G VD A +F M+E++ +SWNS+ A
Sbjct: 175 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 234
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDE---ATMVSLLQACETLHLRRLVEAVHGVIFTCG 278
QNG E+ FS+MR F DE T+ +LL + ++ +HG++ G
Sbjct: 235 AYAQNGHIEESFRIFSLMR---RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 291
Query: 279 LDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
D + + TLL +Y+ GR + VF ++ D ++ ++++ + G +A+
Sbjct: 292 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 351
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLG 396
I G ++VTFT L+AC ++G+ H V+S ++ Q + +V + G
Sbjct: 352 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN---ALVSMYG 408
Query: 397 RCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIM 456
+ G +++++ ++ MP + W AL+G AE+ DP +
Sbjct: 409 KIGEMSESRRVLLQMP-RRDVVAWNALIGG------------YAED------EDPDKALA 449
Query: 457 LSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVV 502
G+ S+ V +++ +L PG +E G +H ++V
Sbjct: 450 AFQTMRVEGVSSNYITVVSVLSACLL---PG-DLLERGKPLHAYIV 491
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 241/516 (46%), Gaps = 29/516 (5%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R I +V+KS + + L+S +MG A +FD+M +D +SWNS+ + +++
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G + +FS+M+ D E+N T +++S ++ G+ +H VK+G + V V
Sbjct: 240 GHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
NTL+ MY G A +F M ++++SWNS++A +GR +A+ M +G
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
+ T S L AC T +HG++ GL N I L+++Y KIG ++ S +
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG- 363
V ++ + D VA A++ GYA +A+ F+ EG+ +++T +LSAC G
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 364 LVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWG 421
L++ GK H + V + G + + ++ + +CG L+ +++L + N W
Sbjct: 479 LLERGKPLHAYIVSA---GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWN 534
Query: 422 ALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKV 481
A+L A+ +H E ++ L S R++ + + +S S S AAK+ L + +
Sbjct: 535 AML-AANAHHG------HGEEVLKL-VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 586
Query: 482 LARNPGCSFIEHGNKIHRFVVDDYSH------------PDSDKIHKKLEEVMSKIQEFGF 529
L EH + I D YS P ++ ++S + G+
Sbjct: 587 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 646
Query: 530 VSETESILHDVAE-EIKTNMVNKHSEKIALAYGLLV 564
E + H++ E IK V S A ++G LV
Sbjct: 647 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLV 682
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 159/328 (48%), Gaps = 11/328 (3%)
Query: 90 YLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELT 149
Y G A+ LFD MP ++ VSWN+++SG + G M F M DL ++ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFV 60
Query: 150 FISVISACALAKAR-EEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM 208
S+++AC + + EG VH K G+ V V ++++YG +G V + K+F M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 209 TEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVE 268
++N+VSW S++ + G P E I+ + MR G+ +E +M ++ +C L L
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 269 AVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHG 328
+ G + GL+ + + +L+++ +G ++ + +F ++S+ D ++ ++ + YA +G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 329 CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY 388
E+ + F R E + T + LLS H VD K + V V+ D
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH---VDHQKWGRGIHGLV--VKMGFDSV 295
Query: 389 SCMVDLLGR----CGLLNDAKELIKNMP 412
C+ + L R G +A + K MP
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 158/370 (42%), Gaps = 40/370 (10%)
Query: 47 LVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
+VS L L L + +HA ++ + D + + L++ Y G +Q LF+ +
Sbjct: 466 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 525
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 166
N++ ++WN++++ + G + + S M+S + L++ +F +SA A EEG
Sbjct: 526 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS-FGVSLDQFSFSEGLSAAAKLAVLEEG 584
Query: 167 QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
Q +H AVKLG E + N +MY K G + K+ +++ SWN +++ ++
Sbjct: 585 QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRH 644
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT-CGLDENITI 285
G E F M G+ P T VSLL AC L A + +I GL+ I
Sbjct: 645 GYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEH 704
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
+++L + GRL EA F + M
Sbjct: 705 CICVIDLLGRSGRL-------------------------------AEAETFISKM---PM 730
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH-YSCMVDLLGRCGLLNDA 404
+P+ + + LL++C G +D G+ + +S ++P D Y ++ G D
Sbjct: 731 KPNDLVWRSLLASCKIHGNLDRGRKAAENLSK---LEPEDDSVYVLSSNMFATTGRWEDV 787
Query: 405 KELIKNMPFE 414
+ + K M F+
Sbjct: 788 ENVRKQMGFK 797
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 121/239 (50%), Gaps = 7/239 (2%)
Query: 191 MYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
MY KFG V A LF M +N VSWN+M++ + G E + +F M G+ P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 251 MVSLLQAC-ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
+ SL+ AC + + R VHG + GL ++ + T +L+LY G ++ S KVF E+
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 310 SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
+ V+ T+++ GY+ G E I ++ EG+ + + + ++S+C GL+ +
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDES 177
Query: 370 HYFQVMSDVY--GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
Q++ V G++ +L + ++ +LG G ++ A + M E ++ W ++ A
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAA 235
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/536 (35%), Positives = 323/536 (60%), Gaps = 2/536 (0%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
L++ Y+ G +A+ +FDEMP++ +WN++++G + +S+F M L
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHG-LGFSP 89
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF 205
+E T SV S A ++ GQ +H +K G+EL + V ++L +MY + G + +
Sbjct: 90 DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 149
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRR 265
+M +N+V+WN+++ QNG P + + MM+++G P++ T V++L +C L +R
Sbjct: 150 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRG 209
Query: 266 LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYA 325
+ +H G + +V++L+++YSK G L + K F+E D+V ++M+S Y
Sbjct: 210 QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYG 269
Query: 326 MHGCGTEAIQFFERTIRE-GMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPR 384
HG G EAI+ F + ME + V F +LL ACSHSGL D+G F +M + YG +P
Sbjct: 270 FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329
Query: 385 LDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLI 444
L HY+C+VDLLGR G L+ A+ +I++MP + + +W LL A ++ N + + + ++
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 389
Query: 445 ALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDD 504
+DP+D Y++L+N+++++ W D ++VR M+ K + + G S+ EH ++H+F + D
Sbjct: 390 QIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGD 449
Query: 505 YSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLV 564
S S +I+ L+E+ +++ G+ +T S+LHD+ EE K + + +HSEK+A+A+ L++
Sbjct: 450 RSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMI 509
Query: 565 SAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
P+ IIKNLR+C DCH K++S+I+ R I +RD RFHHF +G CSCGDYW
Sbjct: 510 LPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 149/309 (48%), Gaps = 4/309 (1%)
Query: 37 HSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGAT 96
H + P + + ++ S+ + IH IK D + L Y+ G
Sbjct: 83 HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL 142
Query: 97 PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 156
D +++ MP ++ V+WN+L+ G ++ G + ++ +MK N++TF++V+S+
Sbjct: 143 QDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKIS-GCRPNKITFVTVLSS 201
Query: 157 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSW 216
C+ R +GQ +H A+K+G V VV++LI+MY K G + A K F +++ V W
Sbjct: 202 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 261
Query: 217 NSMVAVCTQNGRPNEAINYF-SMMRLNGLFPDEATMVSLLQACETLHLR-RLVEAVHGVI 274
+SM++ +G+ +EAI F +M + +E ++LL AC L+ + +E ++
Sbjct: 262 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 321
Query: 275 FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEA 333
G + T +++L + G L+ + + + K D V +LS +H A
Sbjct: 322 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 381
Query: 334 IQFFERTIR 342
+ F+ ++
Sbjct: 382 QRVFKEILQ 390
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 118/256 (46%), Gaps = 5/256 (1%)
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
N LIN Y + G + +A K+F M ++ + +WN+M+A Q E ++ F M G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
PDE T+ S+ L + + +HG GL+ ++ + ++L ++Y + G+L V
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
+ + VA ++ G A +GC + ++ G P+ +TF +LS+CS +
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 366 DEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLG 425
+G+ + G + S ++ + +CG L DA + E + +W +++
Sbjct: 209 GQGQQIHAEAIKI-GASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE-DEVMWSSMIS 266
Query: 426 ASRVYHNISIGKEAAE 441
A Y G EA E
Sbjct: 267 A---YGFHGQGDEAIE 279
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/603 (33%), Positives = 345/603 (57%), Gaps = 20/603 (3%)
Query: 27 TLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSL---YCCRVIHARVIKSLDYRDGFIG 83
+L SE+ + S+ P + LKS +SL + +H V K + F+
Sbjct: 32 SLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVL 91
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNKDFVS--WNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
L+S Y G DA+ +F+E P +S +N+L+SG++ + + +F MK +
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMK-ET 150
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
+ ++ +T + ++ C + + G+ +H VK G++ +V V+N+ I MY K G V++
Sbjct: 151 GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAG 210
Query: 202 FKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL 261
+LF M + +++WN++++ +QNG + + + M+ +G+ PD T+VS+L +C L
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHL 270
Query: 262 HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAML 321
+++ V ++ + G N+ + +++Y++ G L + VF + V+ TAM+
Sbjct: 271 GAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMI 330
Query: 322 SGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGV 381
Y MHG G + F+ I+ G+ PD F +LSACSHSGL D+G F+ M Y +
Sbjct: 331 GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 390
Query: 382 QPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAE 441
+P +HYSC+VDLLGR G L++A E I++MP EP+ VWGALLGA +++ N+ + + A
Sbjct: 391 EPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFA 450
Query: 442 NLIALDPSDPRNYIMLSNIYSAS----GLWSDAAKVRALMKTKVLARNPGCSFIEHGNKI 497
+I +P++ Y+++SNIYS S G+W ++R +M+ + + PG S++EH ++
Sbjct: 451 KVIEFEPNNIGYYVLMSNIYSDSKNQEGIW----RIRVMMRERAFRKKPGYSYVEHKGRV 506
Query: 498 HRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIA 557
H F+ D SH ++++H+ L+E+ + + E ++ D EE+ + +HSE++A
Sbjct: 507 HLFLAGDRSHEQTEEVHRMLDELETSVMEL-----AGNMDCDRGEEVSST-TREHSERLA 560
Query: 558 LAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCG 617
+A+G+L S +++IKNLR+C DCH K VS I R ++RDA RFH+F DG+CSC
Sbjct: 561 IAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCK 620
Query: 618 DYW 620
DYW
Sbjct: 621 DYW 623
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
WN + +E+I+ + M +G PD + +L++C +L L + +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVAC--TAMLSGYAMHGCGTEA 333
G + ++T L+++Y K G + + KVF E + +++ A++SGY + T+A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 334 IQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYG--VQPRLDH---- 387
F R G+ D VT L+ C+ V E Y + ++G V+ LD
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT----VPE---YLWLGRSLHGQCVKGGLDSEVAV 193
Query: 388 YSCMVDLLGRCGLLNDAKELIKNMP 412
+ + + +CG + + L MP
Sbjct: 194 LNSFITMYMKCGSVEAGRRLFDEMP 218
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/559 (35%), Positives = 324/559 (57%), Gaps = 1/559 (0%)
Query: 63 CCRVIHAR-VIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGF 121
C ++ AR V + RD + +V+ Y +G +A+ LFDEM KD SW ++V+G+
Sbjct: 133 CGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGY 192
Query: 122 SKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQ 181
K+ + ++S+M+ + N T ++A A K G+ +H V+ G++
Sbjct: 193 VKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSD 252
Query: 182 VKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRL 241
+ ++L++MYGK G +D A +F + E+++VSW SM+ ++ R E + FS +
Sbjct: 253 EVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 312
Query: 242 NGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNA 301
+ P+E T +L AC L L + VHG + G D ++L+++Y+K G + +
Sbjct: 313 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIES 372
Query: 302 SCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSH 361
+ V KPD V+ T+++ G A +G EA+++F+ ++ G +PDHVTF ++LSAC+H
Sbjct: 373 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 432
Query: 362 SGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWG 421
+GLV++G +F +++ + + DHY+C+VDLL R G K +I MP +P+ +W
Sbjct: 433 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 492
Query: 422 ALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKV 481
++LG Y NI + +EAA+ L ++P +P Y+ ++NIY+A+G W + K+R M+
Sbjct: 493 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552
Query: 482 LARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVA 541
+ + PG S+ E K H F+ D SHP ++I + L E+ K++E G+V T +LHDV
Sbjct: 553 VTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVE 612
Query: 542 EEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIR 601
+E K + HSEK+A+A+ +L + + + KNLR C DCH KF+S I KR I +R
Sbjct: 613 DEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVR 672
Query: 602 DAKRFHHFSDGLCSCGDYW 620
D+ RFH F +G CSCGDYW
Sbjct: 673 DSTRFHCFENGQCSCGDYW 691
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 173/347 (49%), Gaps = 14/347 (4%)
Query: 46 PLVSTLLVALKSSSSLYCCRV---IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + T+ +A+ +++++ C R IH ++++ D + L+ Y G +A+ +
Sbjct: 216 PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNI 275
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD++ KD VSW S++ + K S+FS + + NE TF V++ACA
Sbjct: 276 FDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE-RPNEYTFAGVLNACADLTT 334
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
E G+ VH ++G + ++L++MY K G ++SA + + ++VSW S++
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHL-RRLVEAVHGVIFTCGLDE 281
C QNG+P+EA+ YF ++ +G PD T V++L AC L + +E + + L
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSH 454
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQFFERT 340
T L++L ++ GR V +E+ KP K ++L G + +G I E
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYG----NIDLAEEA 510
Query: 341 IRE--GMEPDH-VTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPR 384
+E +EP++ VT+ + + + +G +E + M ++ GV R
Sbjct: 511 AQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEI-GVTKR 556
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 34/310 (10%)
Query: 149 TFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK-------------- 194
T+ ++I C+ +A EEG+ VH G + + N L+ MY K
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 195 -----------------FGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFS 237
G ++ A KLF MTE++ SW +MV + +P EA+ +S
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 238 MM-RLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKI 296
+M R+ P+ T+ + A + R + +HG I GLD + + ++L+++Y K
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 297 GRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLL 356
G ++ + +F +I + D V+ T+M+ Y E F + P+ TF +L
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 357 SACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPN 416
+AC+ + GK M+ V G P S +VD+ +CG + AK ++ P +P+
Sbjct: 327 NACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPD 384
Query: 417 SGVWGALLGA 426
W +L+G
Sbjct: 385 LVSWTSLIGG 394
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 40/214 (18%)
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
P +T +L+Q C + VH I T G I I LL +Y+K G L + KV
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
F E+ D + M++GYA G EA + F+ E E D ++T +++
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD----EMTEKDSYSWTAMVTGYVKKDQP 198
Query: 366 DEGKHYFQVMSDVYGVQPR-------------------------------LDH----YSC 390
+E + +M V +P LD +S
Sbjct: 199 EEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSS 258
Query: 391 MVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
++D+ G+CG +++A+ + + E + W +++
Sbjct: 259 LMDMYGKCGCIDEARNIFDKI-VEKDVVSWTSMI 291
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 348/587 (59%), Gaps = 13/587 (2%)
Query: 39 ISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPD 98
+STY D LV + LKS + C + ++ ++ + + ++ ++++ ++ G D
Sbjct: 123 VSTY--DALVEAC-IRLKS---IRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIID 176
Query: 99 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL-DLELNELTFISVISAC 157
A+ LFDE+P ++ S+ S++SGF G+ +F +M +L D E + TF ++ A
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETH--TFAVMLRAS 234
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWN 217
A + G+ +H CA+KLG+ V LI+MY K G ++ A F M E+ V+WN
Sbjct: 235 AGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWN 294
Query: 218 SMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC 277
+++A +G EA+ MR +G+ D+ T+ +++ L L + H +
Sbjct: 295 NVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN 354
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFF 337
G + I T L++ YSK GR++ + VF ++ + + ++ A++ GYA HG GT+A++ F
Sbjct: 355 GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLF 414
Query: 338 ERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGR 397
E+ I + P+HVTF +LSAC++SGL ++G F MS+V+G++PR HY+CM++LLGR
Sbjct: 415 EKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGR 474
Query: 398 CGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIML 457
GLL++A I+ P + +W ALL A R+ N+ +G+ AE L + P NY+++
Sbjct: 475 DGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVM 534
Query: 458 SNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFV----VDDYSHPDSDKI 513
N+Y++ G ++AA V +++K L+ P C+++E G++ H F+ D Y+ +I
Sbjct: 535 YNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQI 594
Query: 514 HKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVI 573
++K++E+M +I E+G+ E + +L DV E+ + + HSEK+A+AYGL+ + PL I
Sbjct: 595 YQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQI 654
Query: 574 IKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+N RIC++CHK +F+SL+ R +++RDA RFHHF +G CSCG YW
Sbjct: 655 TQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 151/351 (43%), Gaps = 8/351 (2%)
Query: 100 QLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACAL 159
Q+L D +K V+ S + +F +++ ++ T+ +++ AC
Sbjct: 76 QILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIR 135
Query: 160 AKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSM 219
K+ + V+ + G E + ++N ++ M+ K G + A +LF + E+N+ S+ S+
Sbjct: 136 LKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSI 195
Query: 220 VAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL 279
++ G EA F MM + T +L+A L + + +H G+
Sbjct: 196 ISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGV 255
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFER 339
+N + L+++YSK G + + F + + VA +++GYA+HG EA+
Sbjct: 256 VDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYD 315
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
G+ D T + ++ + ++ K + G + + + +VD + G
Sbjct: 316 MRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIR-NGFESEIVANTALVDFYSKWG 374
Query: 400 LLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAA---ENLIALD 447
++ A+ + +P N W AL+G Y N G +A E +IA +
Sbjct: 375 RVDTARYVFDKLP-RKNIISWNALMGG---YANHGRGTDAVKLFEKMIAAN 421
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/602 (34%), Positives = 334/602 (55%), Gaps = 46/602 (7%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
+ +H + S ++ F+G+ LV Y G +A +F M KD VSWN++V+G+S+
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 125 GDLGNCMSVFSVMKSD---LD-------------------------------LELNELTF 150
G + + +F M+ + +D ++ NE+T
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 151 ISVISACALAKAREEGQYVHCCAVKLGMELQVK-------VVNTLINMYGKFGFVDSAFK 203
ISV+S CA A G+ +HC A+K ++L+ V+N LI+MY K VD+A
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 204 LFWAMT--EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG--LFPDEATMVSLLQACE 259
+F +++ E+++V+W M+ +Q+G N+A+ S M P+ T+ L AC
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 260 TLHLRRLVEAVHGVIFTCGLDENITIVTT-LLNLYSKIGRLNASCKVFAEISKPDKVACT 318
+L R+ + +H + V+ L+++Y+K G ++ + VF + ++V T
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 319 AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV 378
++++GY MHG G EA+ F+ R G + D VT +L ACSHSG++D+G YF M V
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608
Query: 379 YGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKE 438
+GV P +HY+C+VDLLGR G LN A LI+ MP EP VW A L R++ + +G+
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEY 668
Query: 439 AAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIH 498
AAE + L + +Y +LSN+Y+ +G W D ++R+LM+ K + + PGCS++E
Sbjct: 669 AAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT 728
Query: 499 RFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIAL 558
F V D +HP + +I++ L + M +I++ G+V ET LHDV +E K +++ +HSEK+AL
Sbjct: 729 TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLAL 788
Query: 559 AYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGD 618
AYG+L + + I KNLR+C DCH ++S I II+RD+ RFHHF +G CSC
Sbjct: 789 AYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKG 848
Query: 619 YW 620
YW
Sbjct: 849 YW 850
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 206/437 (47%), Gaps = 53/437 (12%)
Query: 37 HSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGAT 96
HS+S P + + A SS+ C HA + + + F+G+ LV+ Y +
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSL 178
Query: 97 PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 156
DA+ +FDEM D VSWNS++ ++K G + +FS M ++ + +T ++V+
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238
Query: 157 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSW 216
CA G+ +HC AV M + V N L++MY K G +D A +F M+ +++VSW
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 217 NSMVAVCTQNGRPNEAINYFSMMR-----------------------------------L 241
N+MVA +Q GR +A+ F M+
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 242 NGLFPDEATMVSLLQACETLHLRRLVEAVH--GVIFTCGL------DENITIVTTLLNLY 293
+G+ P+E T++S+L C ++ + +H + + L DEN+ ++ L+++Y
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENM-VINQLIDMY 417
Query: 294 SKIGRLNASCKVFAEIS--KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGME--PDH 349
+K +++ + +F +S + D V T M+ GY+ HG +A++ E + P+
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 350 VTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL 407
T + L AC+ + GK H + + + V L +C++D+ +CG ++DA+ +
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVP--LFVSNCLIDMYAKCGSISDARLV 535
Query: 408 IKNMPFEPNSGVWGALL 424
NM N W +L+
Sbjct: 536 FDNM-MAKNEVTWTSLM 551
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 142/283 (50%), Gaps = 4/283 (1%)
Query: 85 QLVSCYLNMGATPDAQLLFDEMPNKD--FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD 142
L+S Y+++G A L P D WNSL+ + G C+ +F +M S L
Sbjct: 64 HLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS-LS 122
Query: 143 LELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAF 202
+ TF V AC + G+ H ++ G V V N L+ MY + + A
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 203 KLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLN-GLFPDEATMVSLLQACETL 261
K+F M+ ++VSWNS++ + G+P A+ FS M G PD T+V++L C +L
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 262 HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAML 321
L + +H T + +N+ + L+++Y+K G ++ + VF+ +S D V+ AM+
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 322 SGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
+GY+ G +A++ FE+ E ++ D VT++ +S + GL
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 164/370 (44%), Gaps = 27/370 (7%)
Query: 180 LQVKVVNTLINMYGKFGFVDSAFKLF--WAMTEQNMVSWNSMVAVCTQNGRPNEAINYFS 237
L + + + LI+ Y G + A L + ++ + WNS++ NG N+ + F
Sbjct: 57 LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG 116
Query: 238 MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
+M PD T + +AC + R E+ H + G N+ + L+ +YS+
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 298 RLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE-GMEPDHVTFTHLL 356
L+ + KVF E+S D V+ +++ YA G A++ F R E G PD++T ++L
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 357 SACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFE 414
C+ G GK H F V S++ +Q +C+VD+ +CG++++A + NM +
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEM--IQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 415 PNSGVWGALLGA----SRVYHNISIGKEAAENLIALD----PSDPRNYIMLSNIYSASG- 465
+ W A++ R + + ++ E I +D + Y Y A G
Sbjct: 294 -DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 466 ---LWSDAAKVRALMKTKVLARNPGCSFIEHGNKIH----RFVVD--DYSHPDSDKIHKK 516
+ S K + VL+ + HG +IH ++ +D H D + + +
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ 412
Query: 517 LEEVMSKIQE 526
L ++ +K ++
Sbjct: 413 LIDMYAKCKK 422
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/628 (33%), Positives = 340/628 (54%), Gaps = 39/628 (6%)
Query: 30 SETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSC 89
S S F IS ++ LVS+L+ L +L + IH V++ + +I +L+
Sbjct: 32 SNNSGTFSEISN-QKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRT 90
Query: 90 YLNMGAT--PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNE 147
+G P A+ + + + ++ W +++ G++ G ++++ M+ + ++
Sbjct: 91 LTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKE-EITPVS 149
Query: 148 LTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWA 207
TF +++ AC K G+ H +L V V NT+I+MY K +D A K+F
Sbjct: 150 FTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDE 209
Query: 208 MTE-------------------------------QNMVSWNSMVAVCTQNGRPNEAINYF 236
M E ++MV+W +MV QN +P EA+ YF
Sbjct: 210 MPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYF 269
Query: 237 SMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLD--ENITIVTTLLNLYS 294
M +G+ DE T+ + AC L + + + G +++ I + L+++YS
Sbjct: 270 DRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYS 329
Query: 295 KIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG-MEPDHVTFT 353
K G + + VF ++ + ++M+ G A HG EA+ F + + ++P+ VTF
Sbjct: 330 KCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFV 389
Query: 354 HLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPF 413
L ACSHSGLVD+G+ F M +GVQP DHY+CMVDLLGR G L +A ELIK M
Sbjct: 390 GALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSV 449
Query: 414 EPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKV 473
EP+ GVWGALLGA R+++N I + AAE+L L+P NYI+LSN+Y+++G W +V
Sbjct: 450 EPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRV 509
Query: 474 RALMKTKVLARNPGCSFIEHGN-KIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSE 532
R L+K K L + P S++ N ++H+F + +HP S+KI KLEE++ ++ G+ +
Sbjct: 510 RKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPD 569
Query: 533 TESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSL 592
S+ +DV++ K ++ +H+EK+ALA+ LL + D + I+KNLR+C DCHK + S
Sbjct: 570 LSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASE 629
Query: 593 IEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+ + II+RD RFHHF G CSCGD+W
Sbjct: 630 VTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/525 (36%), Positives = 313/525 (59%), Gaps = 6/525 (1%)
Query: 99 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL--NELTFISVISA 156
A+ LF+ M D V +NS+ G+S+ N + VFS+ L+ + + TF S++ A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSR---FTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 157 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSW 216
CA+AKA EEG+ +HC ++KLG++ V V TLINMY + VDSA +F + E +V +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT 276
N+M+ + RPNEA++ F M+ L P+E T++S+L +C L L + +H
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 277 CGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQF 336
+ + + T L+++++K G L+ + +F ++ D A +AM+ YA HG +++
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 337 FERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLG 396
FER E ++PD +TF LL+ACSH+G V+EG+ YF M +G+ P + HY MVDLL
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 397 RCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIM 456
R G L DA E I +P P +W LL A ++N+ + ++ +E + LD S +Y++
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVI 438
Query: 457 LSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKK 516
LSN+Y+ + W +R +MK + + PGCS IE N +H F D + K+H+
Sbjct: 439 LSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRA 498
Query: 517 LEEVMSKIQEFGFVSETESILH-DVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIK 575
L+E++ +++ G+V +T ++H ++ ++ K + HSEK+A+ +GLL + + ++K
Sbjct: 499 LDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVK 558
Query: 576 NLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
NLR+CRDCH AK +SLI R +++RD +RFHHF DG CSCGD+W
Sbjct: 559 NLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 6/260 (2%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + +LL A + +L R +H +K + ++ L++ Y A+ +
Sbjct: 127 PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCV 186
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD + V +N++++G+++R +S+F M+ L+ NE+T +SV+S+CAL +
Sbjct: 187 FDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY-LKPNEITLLSVLSSCALLGS 245
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
+ G+++H A K VKV LI+M+ K G +D A +F M ++ +W++M+
Sbjct: 246 LDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVA 305
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA---VHGVIFTCGL 279
+G+ +++ F MR + PDE T + LL AC H R+ E ++ G+
Sbjct: 306 YANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACS--HTGRVEEGRKYFSQMVSKFGI 363
Query: 280 DENITIVTTLLNLYSKIGRL 299
+I ++++L S+ G L
Sbjct: 364 VPSIKHYGSMVDLLSRAGNL 383
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
+ L+ + G+ DA +F++M KD +W++++ ++ G M +F M+S+
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE- 325
Query: 142 DLELNELTFISVISACALAKAREEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
+++ +E+TF+ +++AC+ EEG +Y K G+ +K +++++ + G ++
Sbjct: 326 NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLED 385
Query: 201 AFKLFWAMT-EQNMVSWNSMVAVCTQNG 227
A++ + + W ++A C+ +
Sbjct: 386 AYEFIDKLPISPTPMLWRILLAACSSHN 413
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/579 (34%), Positives = 330/579 (56%), Gaps = 5/579 (0%)
Query: 46 PLVSTLLVALKSSSSLYC---CRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P T ALK+S L + +H +++K+ D +G L+ Y +G DA +
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F+EMP D V W+ +++ F + G + +F M+ + NE T S+++ CA+ K
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP-NEFTLSSILNGCAIGKC 363
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
G+ +H VK+G +L + V N LI++Y K +D+A KLF ++ +N VSWN+++
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
G +A + F N + E T S L AC +L L VHG+ +
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
+ + +L+++Y+K G + + VF E+ D + A++SGY+ HG G +A++ +
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLN 402
+P+ +TF +LS CS++GL+D+G+ F+ M +G++P L+HY+CMV LLGR G L+
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 403 DAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYS 462
A +LI+ +P+EP+ +W A+L AS +N + +AE ++ ++P D Y+++SN+Y+
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA 663
Query: 463 ASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMS 522
+ W++ A +R MK + + PG S+IEH +H F V HPD I+ LE +
Sbjct: 664 GAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNM 723
Query: 523 KIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLL-VSAADMPLVIIKNLRICR 581
K G+V + ++L D+ +E K + HSE++ALAYGL+ + ++ ++I+KNLRIC
Sbjct: 724 KATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICS 783
Query: 582 DCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
DCH K +S I +R ++IRD RFHHF G+CSCGD+W
Sbjct: 784 DCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 186/382 (48%), Gaps = 18/382 (4%)
Query: 64 CRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSK 123
C +H+ ++K + F+G L++ Y G+ A+ +F+ + KD V W +VS + +
Sbjct: 165 CPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVE 224
Query: 124 RGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVK 183
G + + + S M+ N TF + + A A + + VH +K L +
Sbjct: 225 NGYFEDSLKLLSCMRM-AGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG 243
V L+ +Y + G + AFK+F M + ++V W+ M+A QNG NEA++ F MR
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 244 LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
+ P+E T+ S+L C L E +HG++ G D +I + L+++Y+K +++ +
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
K+FAE+S ++V+ ++ GY G G +A F +R + VTF+ L AC+
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHY------SCMVDLLGRCGLLNDAKELIKNMPFEPNS 417
+D G V+G+ + ++ + ++D+ +CG + A+ + M +
Sbjct: 464 SMDLGVQ-------VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDV 515
Query: 418 GVWGALLGASRVYHNISIGKEA 439
W AL+ Y +G++A
Sbjct: 516 ASWNALISG---YSTHGLGRQA 534
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 180/379 (47%), Gaps = 18/379 (4%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
+ IH ++K D F + L++ Y+ G DA LFDEMP ++ VS+ +L G++ +
Sbjct: 69 KAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ 128
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
+G ++S + + ELN F S + E ++H VKLG + V
Sbjct: 129 DPIG----LYSRLHRE-GHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFV 183
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
LIN Y G VDSA +F + +++V W +V+ +NG +++ S MR+ G
Sbjct: 184 GAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF 243
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIF-TCG-LDENITIVTTLLNLYSKIGRLNAS 302
P+ T + L+A L + VHG I TC LD + + LL LY+++G ++ +
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV--GLLQLYTQLGDMSDA 301
Query: 303 CKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHS 362
KVF E+ K D V + M++ + +G EA+ F R + P+ T + +L+ C+
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361
Query: 363 GLVDEGKHYFQVMSDVYGVQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVW 420
G+ Q+ V V LD Y + ++D+ +C ++ A +L + N W
Sbjct: 362 KCSGLGE---QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEVSW 417
Query: 421 GALLGASRVYHNISIGKEA 439
++ Y N+ G +A
Sbjct: 418 NTVIVG---YENLGEGGKA 433
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/600 (36%), Positives = 344/600 (57%), Gaps = 12/600 (2%)
Query: 31 ETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRV---IHARVIKSLDYRDGFIGDQLV 87
E R+ S+ + P TL+ +L S +SL ++ IH +K + + + L+
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALM 457
Query: 88 SCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSK-RGDLGNCMSVFSVMKSDLDLELN 146
+ Y G + + +F MP D VSWNS++ ++ L + F + +LN
Sbjct: 458 TLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF-LNAQRAGQKLN 516
Query: 147 ELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFW 206
+TF SV+SA + E G+ +H A+K + + N LI YGK G +D K+F
Sbjct: 517 RITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFS 576
Query: 207 AMTEQ-NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLH-LR 264
M E+ + V+WNSM++ N +A++ M G D ++L A ++ L
Sbjct: 577 RMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLE 636
Query: 265 RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGY 324
R +E VH L+ ++ + + L+++YSK GRL+ + + F + + + +M+SGY
Sbjct: 637 RGME-VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGY 695
Query: 325 AMHGCGTEAIQFFERTIREGMEP-DHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQP 383
A HG G EA++ FE +G P DHVTF +LSACSH+GL++EG +F+ MSD YG+ P
Sbjct: 696 ARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAP 755
Query: 384 RLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA--SRVYHNISIGKEAAE 441
R++H+SCM D+LGR G L+ ++ I+ MP +PN +W +LGA +GK+AAE
Sbjct: 756 RIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAE 815
Query: 442 NLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFV 501
L L+P + NY++L N+Y+A G W D K R MK + + G S++ + +H FV
Sbjct: 816 MLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFV 875
Query: 502 VDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYG 561
D SHPD+D I+KKL+E+ K+++ G+V +T L+D+ +E K +++ HSEK+A+A+
Sbjct: 876 AGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFV 935
Query: 562 LLVS-AADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
L ++ +P+ I+KNLR+C DCH K++S IE R II+RD+ RFHHF DG CSC D+W
Sbjct: 936 LAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 198/421 (47%), Gaps = 24/421 (5%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK 138
D F+G LVS + G+ A+ +F++M ++ V+ N L+ G ++ +F M
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 139 SDLDLE-------LNELTFISVISACALAKAREEGQYVHCCAVKLGM-ELQVKVVNTLIN 190
S +D+ L+ S+ L K RE VH + G+ + V + N L+N
Sbjct: 302 SMIDVSPESYVILLSSFPEYSLAEEVGLKKGRE----VHGHVITTGLVDFMVGIGNGLVN 357
Query: 191 MYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
MY K G + A ++F+ MT+++ VSWNSM+ QNG EA+ + MR + + P T
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 251 MVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
++S L +C +L +L + +HG G+D N+++ L+ LY++ G LN K+F+ +
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 311 KPDKVACTAMLSGYAMHGCG-TEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
+ D+V+ +++ A EA+ F R G + + +TF+ +LSA S + GK
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537
Query: 370 HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRV 429
++ + + ++ G+CG ++ +++ M ++ W +++ S
Sbjct: 538 Q-IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI--SGY 594
Query: 430 YHNISIGKEAAENLIALDPSDPRNYIMLSNIYSA--------SGLWSDAAKVRALMKTKV 481
HN + K L + M + + SA G+ A VRA +++ V
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 482 L 482
+
Sbjct: 655 V 655
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 180/370 (48%), Gaps = 13/370 (3%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R H+R+ K+ +D ++ + L++ YL G + A+ +FDEMP ++ VSW +VSG+S+
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKARE--EGQYVHCCAVKLGMELQV 182
G+ + M + + N+ F+SV+ AC + G+ +H KL +
Sbjct: 81 GEHKEALVFLRDMVKE-GIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 183 KVVNTLINMYGK-FGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRL 241
V N LI+MY K G V A F + +N VSWNS+++V +Q G A FS M+
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 242 NGLFPDEATMVSLL-QACE-TLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRL 299
+G P E T SL+ AC T RL+E + I GL ++ + + L++ ++K G L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 300 NASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSAC 359
+ + KVF ++ + V ++ G G EA + F + ++ ++ LLS+
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF-MDMNSMIDVSPESYVILLSSF 318
Query: 360 SHSGLVDE-----GKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFE 414
L +E G+ + V + + +V++ +CG + DA+ + M +
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-D 377
Query: 415 PNSGVWGALL 424
+S W +++
Sbjct: 378 KDSVSWNSMI 387
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 17/316 (5%)
Query: 151 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE 210
+S + +C R ++ H K ++ V + N LIN Y + G SA K+F M
Sbjct: 7 LSFVQSCV--GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 211 QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLV--E 268
+N VSW +V+ ++NG EA+ + M G+F ++ VS+L+AC+ + ++
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 269 AVHGVIFTCGLDENITIVTTLLNLYSK-IGRLNASCKVFAEISKPDKVACTAMLSGYAMH 327
+HG++F + + L+++Y K IG + + F +I + V+ +++S Y+
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 328 GCGTEAIQFFERTIREGMEPDHVTFTHLL-SACSHSGLVDEGKHYFQVMSDVY--GVQPR 384
G A + F +G P TF L+ +ACS + + + Q+M + G+
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLT--EPDVRLLEQIMCTIQKSGLLTD 242
Query: 385 LDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLI 444
L S +V + G L+ A+++ M + G ++G R G+EA + +
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ----KWGEEATKLFM 298
Query: 445 ALDP---SDPRNYIML 457
++ P +Y++L
Sbjct: 299 DMNSMIDVSPESYVIL 314
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/557 (33%), Positives = 326/557 (58%), Gaps = 2/557 (0%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R +H+ +K+ R+ + L+ Y G A+ +F EM ++ VS+ S+++G+++
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G G + +F M+ + + + T +V++ CA + +EG+ VH + + + V
Sbjct: 376 GLAGEAVKLFEEMEEE-GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
N L++MY K G + A +F M ++++SWN+++ ++N NEA++ F+++
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 245 F-PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
F PDE T+ +L AC +L +HG I G + + +L+++Y+K G L +
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
+F +I+ D V+ T M++GY MHG G EAI F + + G+E D ++F LL ACSHSG
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGAL 423
LVDEG +F +M ++P ++HY+C+VD+L R G L A I+NMP P++ +WGAL
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Query: 424 LGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLA 483
L R++H++ + ++ AE + L+P + Y++++NIY+ + W ++R + + L
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 734
Query: 484 RNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEE 543
+NPGCS+IE +++ FV D S+P+++ I L +V +++ E G+ T+ L D E
Sbjct: 735 KNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEM 794
Query: 544 IKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDA 603
K + HSEK+A+A G++ S + + KNLR+C DCH+ AKF+S + +R I++RD+
Sbjct: 795 EKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDS 854
Query: 604 KRFHHFSDGLCSCGDYW 620
RFH F DG CSC +W
Sbjct: 855 NRFHQFKDGHCSCRGFW 871
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 180/349 (51%), Gaps = 5/349 (1%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK 138
D +G +L Y N G +A +FDE+ + + WN L++ +K GD + +F M
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 139 SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFV 198
S +E++ TF V + + ++ G+ +H +K G + V N+L+ Y K V
Sbjct: 188 SS-GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRV 246
Query: 199 DSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQAC 258
DSA K+F MTE++++SWNS++ NG + ++ F M ++G+ D AT+VS+ C
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGC 306
Query: 259 ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACT 318
L L AVH + TLL++YSK G L+++ VF E+S V+ T
Sbjct: 307 ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYT 366
Query: 319 AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQ-VMSD 377
+M++GYA G EA++ FE EG+ PD T T +L+ C+ L+DEGK + + +
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426
Query: 378 VYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
G + + ++D+ +CG + +A+ + M + + W ++G
Sbjct: 427 DLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGG 472
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 183/368 (49%), Gaps = 20/368 (5%)
Query: 54 ALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVS 113
+ S S++ +H ++KS +G+ LV+ YL A+ +FDEM +D +S
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCA 173
WNS+++G+ G +SVF M +E++ T +SV + CA ++ G+ VH
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 174 VKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAI 233
VK + + NTL++MY K G +DSA +F M+++++VS+ SM+A + G EA+
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 234 NYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLY 293
F M G+ PD T+ ++L C L + VH I L +I + L+++Y
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 294 SKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG-MEPDHVTF 352
+K G + + VF+E+ D ++ ++ GY+ + EA+ F + E PD T
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 353 THLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS------CMVDLLGRCGLLNDAKE 406
+L AC+ D+G+ +++G R ++S +VD+ +CG L
Sbjct: 503 ACVLPACASLSAFDKGR-------EIHGYIMRNGYFSDRHVANSLVDMYAKCGAL----- 550
Query: 407 LIKNMPFE 414
L+ +M F+
Sbjct: 551 LLAHMLFD 558
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 144/299 (48%), Gaps = 8/299 (2%)
Query: 115 NSLVSGFSKRGDLGNCMSVFSVM-KSDLDLELNELTFISVISACALAKAREEGQYVHCCA 173
N+ + F + G+L N + + V K D+D T SV+ CA +K+ ++G+ V
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR----TLCSVLQLCADSKSLKDGKEVDNFI 120
Query: 174 VKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAI 233
G + + + L MY G + A ++F + + + WN ++ ++G + +I
Sbjct: 121 RGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSI 180
Query: 234 NYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLY 293
F M +G+ D T + ++ +L E +HG I G E ++ +L+ Y
Sbjct: 181 GLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY 240
Query: 294 SKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFT 353
K R++++ KVF E+++ D ++ ++++GY +G + + F + + G+E D T
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 354 HLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY-SCMVDLLGRCGLLNDAKELIKNM 411
+ + C+ S L+ G+ + V R D + + ++D+ +CG L+ AK + + M
Sbjct: 301 SVFAGCADSRLISLGRAVHSI--GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 357
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 95/183 (51%), Gaps = 3/183 (1%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + V+ +L A S S+ R IH ++++ + D + + LV Y GA A +L
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD++ +KD VSW +++G+ G +++F+ M+ +E +E++F+S++ AC+ +
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ-AGIEADEISFVSLLYACSHSGL 615
Query: 163 REEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM-TEQNMVSWNSMV 220
+EG ++ + + +E V+ +++M + G + A++ M + W +++
Sbjct: 616 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 675
Query: 221 AVC 223
C
Sbjct: 676 CGC 678
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/581 (35%), Positives = 328/581 (56%), Gaps = 13/581 (2%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + +TLL +L + +L R IHA VI++ + I +V+ Y+ G A+ +
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD+M K V+ L+ G+++ G + + +F + ++ +E + F V+ ACA +
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTE-GVEWDSFVFSVVLKACASLEE 300
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
G+ +H C KLG+E +V V L++ Y K +SA + F + E N VSW+++++
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 223 CTQNGRPNEAINYFSMMR-LNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
Q + EA+ F +R N + T S+ QAC L + VH L
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
+ + L+ +YSK G L+ + +VF + PD VA TA +SG+A +G +EA++ FE+ +
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
GM+P+ VTF +L+ACSH+GLV++GKH M Y V P +DHY CM+D+ R GLL
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 402 NDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIY 461
++A + +KNMPFEP++ W L + N+ +G+ A E L LDP D Y++ N+Y
Sbjct: 541 DEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLY 600
Query: 462 SASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVM 521
+ +G W +AA++ LM ++L + CS+I+ KIHRF+V D HP + +I++KL
Sbjct: 601 TWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKL---- 656
Query: 522 SKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLV--SAADMPLVIIKNLRI 579
+EF E + ++ E + + HSE++A+A+GL+ A P+ + KNLR
Sbjct: 657 ---KEFDGFMEGDMFQCNMTE--RREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRA 711
Query: 580 CRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
C DCH+ AK VSL+ I+IRD++RFHHF +G CSC DYW
Sbjct: 712 CPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 196/412 (47%), Gaps = 14/412 (3%)
Query: 38 SISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATP 97
S+S+Y L A + SL R++H R+ ++ + + ++ Y +
Sbjct: 80 SVSSYS----YQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLE 135
Query: 98 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 157
DA LFDEM + VS +++S ++++G L + +FS M + D + + + +++ +
Sbjct: 136 DADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM-YTTLLKSL 194
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWN 217
+A + G+ +H ++ G+ + ++NMY K G++ A ++F M + V+
Sbjct: 195 VNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACT 254
Query: 218 SMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC 277
++ TQ GR +A+ F + G+ D +L+AC +L L + +H +
Sbjct: 255 GLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKL 314
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFF 337
GL+ +++ T L++ Y K ++C+ F EI +P+ V+ +A++SGY EA++ F
Sbjct: 315 GLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTF 374
Query: 338 ERTIREGMEP--DHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY--SCMVD 393
+++R + T+T + ACS + G QV +D Y S ++
Sbjct: 375 -KSLRSKNASILNSFTYTSIFQACSVLADCNIGG---QVHADAIKRSLIGSQYGESALIT 430
Query: 394 LLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIA 445
+ +CG L+DA E+ ++M P+ W A + Y N S E +++
Sbjct: 431 MYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVS 481
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 224 TQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENI 283
+++ + NEA + M G+ + L +AC L +H + + ++
Sbjct: 59 SKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSV 118
Query: 284 TIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE 343
+ +L +Y + L + K+F E+S+ + V+ T M+S YA G +A+ F +
Sbjct: 119 LLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLAS 178
Query: 344 GMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVY--GVQPRLDHYSCMVDLLGRCGLL 401
G +P +T LL + + +D G+ Q+ + V G+ + +V++ +CG L
Sbjct: 179 GDKPPSSMYTTLLKSLVNPRALDFGR---QIHAHVIRAGLCSNTSIETGIVNMYVKCGWL 235
Query: 402 NDAKELIKNMPFEPNSGVWGALLGASRV 429
AK + M + G ++G ++
Sbjct: 236 VGAKRVFDQMAVKKPVACTGLMVGYTQA 263
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/607 (32%), Positives = 334/607 (55%), Gaps = 38/607 (6%)
Query: 51 LLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKD 110
+L A+ S+L+ +H K D F+ + Y + G A+ +FDEM ++D
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRD 176
Query: 111 FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVH 170
V+WN+++ + + G + +F MK D ++ +E+ +++SAC + ++
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMK-DSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 171 CCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM----------------- 213
++ + + ++ L+ MY G +D A + F M+ +N+
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 295
Query: 214 --------------VSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACE 259
V W +M++ ++ P EA+ F M +G+ PD +M S++ AC
Sbjct: 296 DAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA 355
Query: 260 TLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTA 319
L + + VH I GL+ ++I L+N+Y+K G L+A+ VF ++ + + V+ ++
Sbjct: 356 NLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSS 415
Query: 320 MLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVY 379
M++ +MHG ++A+ F R +E +EP+ VTF +L CSHSGLV+EGK F M+D Y
Sbjct: 416 MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 380 GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEA 439
+ P+L+HY CMVDL GR LL +A E+I++MP N +WG+L+ A R++ + +GK A
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFA 535
Query: 440 AENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHR 499
A+ ++ L+P +++SNIY+ W D +R +M+ K + + G S I+ K H
Sbjct: 536 AKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHE 595
Query: 500 FVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALA 559
F++ D H S++I+ KL+EV+SK++ G+V + S+L DV EE K ++V HSEK+AL
Sbjct: 596 FLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALC 655
Query: 560 YGLLVSAADMP------LVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGL 613
+GL+ + + I+KNLR+C DCH K VS + +R II+RD RFH + +GL
Sbjct: 656 FGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGL 715
Query: 614 CSCGDYW 620
CSC DYW
Sbjct: 716 CSCRDYW 722
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 174/371 (46%), Gaps = 46/371 (12%)
Query: 145 LNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKL 204
L++ +F+ ++ A + A EG +H A K+ V ++MY G ++ A +
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV 168
Query: 205 FWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLR 264
F M+ +++V+WN+M+ + G +EA F M+ + + PDE + +++ AC
Sbjct: 169 FDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228
Query: 265 RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGY 324
R A++ + + + ++T L+ +Y+ G ++ + + F ++S + TAM+SGY
Sbjct: 229 RYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGY 288
Query: 325 AMHG------------------CGT-------------EAIQFFERTIREGMEPDHVTFT 353
+ G C T EA++ FE G++PD V+
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 354 HLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPF 413
++SAC++ G++D+ K + V G++ L + ++++ +CG L+ +++ + MP
Sbjct: 349 SVISACANLGILDKAK-WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP- 406
Query: 414 EPNSGVWGALLGASRVYHNISIGKEAAENL-----IALDPSDPRNYIMLSNIY--SASGL 466
N W +++ A +S+ EA++ L + + +P + +Y S SGL
Sbjct: 407 RRNVVSWSSMINA------LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGL 460
Query: 467 WSDAAKVRALM 477
+ K+ A M
Sbjct: 461 VEEGKKIFASM 471
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 156/342 (45%), Gaps = 40/342 (11%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + ++ ++ A + ++ R I+ +I++ D + LV+ Y G A+
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF-SVMKSDL-------------------- 141
F +M ++ ++VSG+SK G L + +F K DL
Sbjct: 270 FRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEAL 329
Query: 142 ---------DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 192
++ + ++ SVISACA ++ ++VH C G+E ++ + N LINMY
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 193 GKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMV 252
K G +D+ +F M +N+VSW+SM+ + +G ++A++ F+ M+ + P+E T V
Sbjct: 390 AKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 253 SLLQACETLHLRRLVEAVHGVIFTCGLDENITI----VTTLLNLYSKIGRLNASCKVFAE 308
+L C LVE + + + NIT +++L+ + L + +V
Sbjct: 450 GVLYGCSH---SGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIES 506
Query: 309 ISKPDKVAC-TAMLSGYAMHGCGTEAIQFFERTIREGMEPDH 349
+ V +++S +HG E +F + I E +EPDH
Sbjct: 507 MPVASNVVIWGSLMSACRIHG-ELELGKFAAKRILE-LEPDH 546
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/594 (34%), Positives = 334/594 (56%), Gaps = 5/594 (0%)
Query: 31 ETSVR--FHSISTYPRDPL-VSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLV 87
E SVR ++ + D L VS++L A L + I+ ++K+ + + + L+
Sbjct: 290 EESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILI 349
Query: 88 SCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNE 147
Y G A+ +F+ M KD VSWNS++SG+ + GDL M +F +M ++ + +
Sbjct: 350 DVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI-MEEQADH 408
Query: 148 LTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWA 207
+T++ +IS + G+ +H +K G+ + + V N LI+MY K G V + K+F +
Sbjct: 409 ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSS 468
Query: 208 MTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLV 267
M + V+WN++++ C + G + + MR + + PD AT + L C +L +RL
Sbjct: 469 MGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLG 528
Query: 268 EAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMH 327
+ +H + G + + I L+ +YSK G L S +VF +S+ D V T M+ Y M+
Sbjct: 529 KEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMY 588
Query: 328 GCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH 387
G G +A++ F + G+ PD V F ++ ACSHSGLVDEG F+ M Y + P ++H
Sbjct: 589 GEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEH 648
Query: 388 YSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALD 447
Y+C+VDLL R ++ A+E I+ MP +P++ +W ++L A R ++ + + +I L+
Sbjct: 649 YACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELN 708
Query: 448 PSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSH 507
P DP I+ SN Y+A W + +R +K K + +NPG S+IE G +H F D S
Sbjct: 709 PDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSA 768
Query: 508 PDSDKIHKKLEEVMSKIQEFGFVSETESILHDV-AEEIKTNMVNKHSEKIALAYGLLVSA 566
P S+ I+K LE + S + + G++ + + ++ EE K ++ HSE++A+A+GLL +
Sbjct: 769 PQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTE 828
Query: 567 ADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
PL ++KNLR+C DCH+ K +S I R I++RDA RFH F DG CSC D W
Sbjct: 829 PGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 203/420 (48%), Gaps = 20/420 (4%)
Query: 39 ISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIK-SLDYRDGFIGDQLVSCYLNMGATP 97
+ T P +S AL SSS+L R IHA VI LD D F G +L+ Y +
Sbjct: 1 MQTRVSSPFISR---ALSSSSNLNELRRIHALVISLGLDSSDFFSG-KLIDKYSHFREPA 56
Query: 98 DAQLLFDEM-PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 156
+ +F + P K+ WNS++ FSK G + + ++ + ++ TF SVI A
Sbjct: 57 SSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRES-KVSPDKYTFPSVIKA 115
Query: 157 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSW 216
CA E G V+ + +G E + V N L++MY + G + A ++F M +++VSW
Sbjct: 116 CAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSW 175
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT 276
NS+++ + +G EA+ + ++ + + PD T+ S+L A L + + + +HG
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
Query: 277 CGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQF 336
G++ + + L+ +Y K R + +VF E+ D V+ M+ GY E+++
Sbjct: 236 SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM 295
Query: 337 FERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLG 396
F + + +PD +T + +L AC H + K+ + M G + ++D+
Sbjct: 296 FLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYA 353
Query: 397 RCGLLNDAKELIKNMPFEPNSGVW----------GALLGASRVYHNISIGKEAAENLIAL 446
+CG + A+++ +M + ++ W G L+ A +++ + I +E A+++ L
Sbjct: 354 KCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYL 412
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/456 (39%), Positives = 282/456 (61%), Gaps = 1/456 (0%)
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQ 225
G+ +H ++ G + V N+L+++Y G V SA+K+F M E+++V+WNS++ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
NG+P EA+ ++ M G+ PD T+VSLL AC + L + VH + GL N+
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFER-TIREG 344
LL+LY++ GR+ + +F E+ + V+ T+++ G A++G G EAI+ F+ EG
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
+ P +TF +L ACSH G+V EG YF+ M + Y ++PR++H+ CMVDLL R G + A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 405 KELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSAS 464
E IK+MP +PN +W LLGA V+ + + + A ++ L+P+ +Y++LSN+Y++
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 306
Query: 465 GLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKI 524
WSD K+R M + + PG S +E GN++H F++ D SHP SD I+ KL+E+ ++
Sbjct: 307 QRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRL 366
Query: 525 QEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCH 584
+ G+V + ++ DV EE K N V HSEKIA+A+ L+ + P+ ++KNLR+C DCH
Sbjct: 367 RSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCH 426
Query: 585 KTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
K VS + R I++RD RFHHF +G CSC DYW
Sbjct: 427 LAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 147/301 (48%), Gaps = 20/301 (6%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
IH+ VI+S ++ + L+ Y N G A +FD+MP KD V+WNS+++GF++ G
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+++++ M S ++ + T +S++SACA A G+ VH +K+G+ + N
Sbjct: 70 PEEALALYTEMNSK-GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 128
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMR-LNGLF 245
L+++Y + G V+ A LF M ++N VSW S++ NG EAI F M GL
Sbjct: 129 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 188
Query: 246 PDEATMVSLLQACETL--------HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
P E T V +L AC + RR+ E ++ I +++L ++ G
Sbjct: 189 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYK-------IEPRIEHFGCMVDLLARAG 241
Query: 298 RLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLL 356
++ + + + +P+ V +L +H G + F R +EP+H LL
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPNHSGDYVLL 299
Query: 357 S 357
S
Sbjct: 300 S 300
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 5/177 (2%)
Query: 265 RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGY 324
RL E +H V+ G I + +LL+LY+ G + ++ KVF ++ + D VA ++++G+
Sbjct: 5 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 325 AMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPR 384
A +G EA+ + +G++PD T LLSAC+ G + GK M V G+
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRN 123
Query: 385 LDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAE 441
L + ++DL RCG + +AK L M + NS W +L+ V GKEA E
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVN---GFGKEAIE 176
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 4/215 (1%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + +LL A +L + +H +IK R+ + L+ Y G +A+ L
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FDEM +K+ VSW SL+ G + G + +F M+S L E+TF+ ++ AC+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 163 REEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ-NMVSWNSMV 220
+EG +Y + +E +++ ++++ + G V A++ +M Q N+V W +++
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
CT +G + A F+ +++ L P+ + LL
Sbjct: 267 GACTVHGDSDLA--EFARIQILQLEPNHSGDYVLL 299
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/552 (35%), Positives = 309/552 (55%), Gaps = 4/552 (0%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
R+ + +D + +V YL G DA LF +MP K+ +SW +++ G + G
Sbjct: 149 RLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGE 208
Query: 130 CMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
+ +F M ++ F VI+ACA A A G VH +KLG + V +LI
Sbjct: 209 ALDLFKNMLRCC-IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLI 267
Query: 190 NMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
Y + + K+F + + W ++++ + N + +A++ FS M N + P+++
Sbjct: 268 TFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQS 327
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
T S L +C L + +HGV GL+ + + +L+ +YS G +N + VF +I
Sbjct: 328 TFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI 387
Query: 310 SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
K V+ +++ G A HG G A F + IR EPD +TFT LLSACSH G +++G+
Sbjct: 388 FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGR 447
Query: 370 HYFQVMSD-VYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASR 428
F MS + + ++ HY+CMVD+LGRCG L +A+ELI+ M +PN VW ALL A R
Sbjct: 448 KLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACR 507
Query: 429 VYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGC 488
++ ++ G++AA + LD Y++LSNIY+++G WS+ +K+R MK + + PG
Sbjct: 508 MHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGS 567
Query: 489 SFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNM 548
S++ K H F D P +I++KLE + K++E G+ + S LHDV +E K M
Sbjct: 568 SWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEM 625
Query: 549 VNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHH 608
+ HSE++A+A+GL+ + + ++KNLR+C DCH K +S + R I++RD RFHH
Sbjct: 626 LWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHH 685
Query: 609 FSDGLCSCGDYW 620
F +G CSCGDYW
Sbjct: 686 FKNGTCSCGDYW 697
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 156/323 (48%), Gaps = 16/323 (4%)
Query: 85 QLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLE 144
++++ Y DA LFDEMP +D VSWNS++SG + GD+ + +F M E
Sbjct: 71 KMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP-----E 125
Query: 145 LNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVK---VVNTLINMYGKFGFVDSA 201
+ +++ ++++ C + ++ + +L ++ VK N++++ Y +FG VD A
Sbjct: 126 RSVVSWTAMVNGCFRSGKVDQAE-------RLFYQMPVKDTAAWNSMVHGYLQFGKVDDA 178
Query: 202 FKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL 261
KLF M +N++SW +M+ QN R EA++ F M + ++ AC
Sbjct: 179 LKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Query: 262 HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAML 321
+ VHG+I G + +L+ Y+ R+ S KVF E TA+L
Sbjct: 239 PAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALL 298
Query: 322 SGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGV 381
SGY+++ +A+ F +R + P+ TF L++CS G +D GK V + G+
Sbjct: 299 SGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL-GL 357
Query: 382 QPRLDHYSCMVDLLGRCGLLNDA 404
+ + +V + G +NDA
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDA 380
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 138/267 (51%), Gaps = 10/267 (3%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+H +IK + ++ L++ Y N D++ +FDE ++ W +L+SG+S
Sbjct: 247 VHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKK 306
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ +S+FS M + L N+ TF S +++C+ + G+ +H AVKLG+E V N
Sbjct: 307 HEDALSIFSGMLRNSILP-NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYF-SMMRLNGLF 245
+L+ MY G V+ A +F + ++++VSWNS++ C Q+GR A F M+RLN
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE- 424
Query: 246 PDEATMVSLLQACETLHL----RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNA 301
PDE T LL AC R+L + I +D I T ++++ + G+L
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH--IDRKIQHYTCMVDILGRCGKLKE 482
Query: 302 SCKVFAE-ISKPDKVACTAMLSGYAMH 327
+ ++ + KP+++ A+LS MH
Sbjct: 483 AEELIERMVVKPNEMVWLALLSACRMH 509
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 51/276 (18%)
Query: 46 PLVSTLLVALKSSSSLYCC---RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P ST L S S+L + +H +K D F+G+ LV Y + G DA +
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F ++ K VSWNS++ G ++ G +F M L+ E +E+TF ++SAC+
Sbjct: 384 FIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR-LNKEPDEITFTGLLSACS---- 438
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT------EQNMVSW 216
HC GF++ KLF+ M+ ++ + +
Sbjct: 439 -------HC------------------------GFLEKGRKLFYYMSSGINHIDRKIQHY 467
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT 276
MV + + G+ EA M + P+E ++LL AC E IF
Sbjct: 468 TCMVDILGRCGKLKEAEELIERMVVK---PNEMVWLALLSACRMHSDVDRGEKAAAAIFN 524
Query: 277 CGLDENITIVTTLL-NLYSKIGRLNASCKVFAEISK 311
LD + LL N+Y+ GR + K+ ++ K
Sbjct: 525 --LDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKK 558
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 125/288 (43%), Gaps = 21/288 (7%)
Query: 181 QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMR 240
V + +I Y + + A LF M +++VSWNSM++ C + G N A+ F M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 241 LNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
+ A + ++ + RL F ++ ++++ Y + G+++
Sbjct: 125 ERSVVSWTAMVNGCFRSGKVDQAERL--------FYQMPVKDTAAWNSMVHGYLQFGKVD 176
Query: 301 ASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
+ K+F ++ + ++ T M+ G + EA+ F+ +R ++ FT +++AC+
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Query: 361 HSGLVDEGKHYFQVMSDVYGVQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMPFEPNSG 418
++ G QV + + + Y + ++ C + D++++ E
Sbjct: 237 NAPAFHMG---IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE-QVA 292
Query: 419 VWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGL 466
VW ALL S+ K+ E+ +++ RN I+ + ASGL
Sbjct: 293 VWTALLSG------YSLNKK-HEDALSIFSGMLRNSILPNQSTFASGL 333
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/642 (33%), Positives = 338/642 (52%), Gaps = 49/642 (7%)
Query: 15 SPRILHCLPTCCTLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKS 74
SP + LP L + + RF R P L V + S S+ IHA +++
Sbjct: 4 SPLLATSLPQN-QLSTTATARF-------RLPPPEKLAVLIDKSQSVDEVLQIHAAILRH 55
Query: 75 ---LDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCM 131
L R + +L Y + G + LF + + D + + ++ S G
Sbjct: 56 NLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAF 115
Query: 132 SVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINM 191
++ + S ++ NE TF S++ +C+ + G+ +H +K G+ + V L+++
Sbjct: 116 LLYVQLLSS-EINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDV 170
Query: 192 YGKFGFVDSAFK-------------------------------LFWAMTEQNMVSWNSMV 220
Y K G V SA K LF +M E+++VSWN M+
Sbjct: 171 YAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMI 230
Query: 221 AVCTQNGRPNEAINYFSMMRLNGL-FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL 279
Q+G PN+A+ F + G PDE T+V+ L AC + +H + + +
Sbjct: 231 DGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRI 290
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFF-E 338
N+ + T L+++YSK G L + VF + + D VA AM++GYAMHG +A++ F E
Sbjct: 291 RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNE 350
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC 398
G++P +TF L AC+H+GLV+EG F+ M YG++P+++HY C+V LLGR
Sbjct: 351 MQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRA 410
Query: 399 GLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLS 458
G L A E IKNM + +S +W ++LG+ +++ + +GKE AE LI L+ + Y++LS
Sbjct: 411 GQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLS 470
Query: 459 NIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLE 518
NIY++ G + AKVR LMK K + + PG S IE NK+H F D H S +I+ L
Sbjct: 471 NIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLR 530
Query: 519 EVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLR 578
++ +I+ G+V T ++L D+ E K + HSE++A+AYGL+ + PL I KNLR
Sbjct: 531 KISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLR 590
Query: 579 ICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+C DCH K +S I R I++RD RFHHF+DG CSCGD+W
Sbjct: 591 VCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 305/526 (57%), Gaps = 5/526 (0%)
Query: 99 AQLLFDEMPNKDFVS---WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS 155
A+ +FD++ + ++ W ++ G+S+ G + + V+ M +E + +
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSF-IEPGNFSISVALK 244
Query: 156 ACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVS 215
AC K G+ +H VK ++ V N L+ +Y + G D A K+F M+E+N+V+
Sbjct: 245 ACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVT 304
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
WNS+++V ++ R +E N F M+ + AT+ ++L AC + + +H I
Sbjct: 305 WNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQIL 364
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
++ ++ +L+++Y K G + S +VF + D + ML+ YA++G E I
Sbjct: 365 KSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVIN 424
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
FE I G+ PD +TF LLS CS +GL + G F+ M + V P L+HY+C+VD+L
Sbjct: 425 LFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDIL 484
Query: 396 GRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYI 455
GR G + +A ++I+ MPF+P++ +WG+LL + R++ N+S+G+ AA+ L L+P +P NY+
Sbjct: 485 GRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYV 544
Query: 456 MLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVV-DDYSHPDSDKIH 514
M+SNIY+ + +W + K+R +MK + + + GCS+++ +KI FV Y +SD+
Sbjct: 545 MVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYK 604
Query: 515 KKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVII 574
K E+ I++ G+ T +LHDV EE K N V HSE++A Y L+ + +P+ I
Sbjct: 605 KVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRIT 664
Query: 575 KNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
KNLR+C DCH K VS + +R I++RD KRFHHF DG+CSC DYW
Sbjct: 665 KNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 147/289 (50%), Gaps = 6/289 (2%)
Query: 45 DPLVSTLLVALKSSSSLYCCRV---IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
+P ++ VALK+ L RV IHA+++K + D + + L+ Y+ G DA+
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+FD M ++ V+WNSL+S SK+ + ++F M+ ++ + + T +++ AC+
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM-IGFSWATLTTILPACSRVA 351
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
A G+ +H +K + V ++N+L++MYGK G V+ + ++F M +++ SWN M+
Sbjct: 352 ALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLN 411
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT-CGLD 280
NG E IN F M +G+ PD T V+LL C L ++ + T +
Sbjct: 412 CYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVS 471
Query: 281 ENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHG 328
+ L+++ + G++ + KV + KP ++L+ +HG
Sbjct: 472 PALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 315/563 (55%), Gaps = 2/563 (0%)
Query: 59 SSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLV 118
S L + +H +K + + + V+ Y G+ AQ +F + +K SWN+L+
Sbjct: 409 SFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI 468
Query: 119 SGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGM 178
G ++ D + MK L + T S++SAC+ K+ G+ VH ++ +
Sbjct: 469 GGHAQSNDPRLSLDAHLQMKIS-GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 527
Query: 179 ELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSM 238
E + V +++++Y G + + LF AM ++++VSWN+++ QNG P+ A+ F
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 239 MRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR 298
M L G+ +M+ + AC L RL H L+++ I +L+++Y+K G
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 299 LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA 358
+ S KVF + + + AM+ GY +HG EAI+ FE R G PD +TF +L+A
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Query: 359 CSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELI-KNMPFEPNS 417
C+HSGL+ EG Y M +G++P L HY+C++D+LGR G L+ A ++ + M E +
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767
Query: 418 GVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALM 477
G+W +LL + R++ N+ +G++ A L L+P P NY++LSN+Y+ G W D KVR M
Sbjct: 768 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 827
Query: 478 KTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESIL 537
L ++ GCS+IE K+ FVV + ++I + KI + G+ +T S+
Sbjct: 828 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 887
Query: 538 HDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRT 597
HD++EE K + HSEK+AL YGL+ ++ + + KNLRIC DCH AK +S + +R
Sbjct: 888 HDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMERE 947
Query: 598 IIIRDAKRFHHFSDGLCSCGDYW 620
I++RD KRFHHF +G+CSCGDYW
Sbjct: 948 IVVRDNKRFHHFKNGVCSCGDYW 970
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 204/479 (42%), Gaps = 58/479 (12%)
Query: 51 LLVALKSSSSLYCCRVIHARVIKSLDYR-DGFIGDQLVSCYLNMGATPDAQLLFDEMPNK 109
LL A + R IH V S R D + ++++ Y G+ D++ +FD + +K
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
+ WN+++S +S+ + F M S DL + T+ VI ACA G V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRP 229
H VK G+ V V N L++ YG GFV A +LF M E+N+VSWNSM+ V + NG
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 230 NEAINYFS-MMRLNG---LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
E+ MM NG PD AT+V++L C L + VHG LD+ + +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG- 344
L+++YSK G + + +F + + V+ M+ G++ G + + G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 345 -MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLND 403
++ D VT + + C H + P L C L + + N
Sbjct: 390 DVKADEVTILNAVPVCFHESFL-----------------PSLKELHCYS--LKQEFVYN- 429
Query: 404 AKELIKNMPFEPNSGVWGALLGASRVYHNIS----------IGKEAAENLIALDPSDPRN 453
EL+ N F + G+L A RV+H I IG A N DPR
Sbjct: 430 --ELVAN-AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN-------DPRL 479
Query: 454 YIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEH---GNKIHRFVVDDYSHPD 509
+ SGL D+ V +L+ CS ++ G ++H F++ ++ D
Sbjct: 480 SLDAHLQMKISGLLPDSFTVCSLL--------SACSKLKSLRLGKEVHGFIIRNWLERD 530
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 152/321 (47%), Gaps = 19/321 (5%)
Query: 6 HAKFMTLTLSPRILHCLPTCCTLLSETSVRFHSISTYPRDPL-----------------V 48
+AK +L+ + R+ H + + + H+ S PR L V
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 49 STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPN 108
+LL A SL + +H +I++ RD F+ ++S Y++ G Q LFD M +
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 109 KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQY 168
K VSWN++++G+ + G + VF M ++L ++ + V AC+L + G+
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVL-YGIQLCGISMMPVFGACSLLPSLRLGRE 618
Query: 169 VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGR 228
H A+K +E + +LI+MY K G + + K+F + E++ SWN+M+ +G
Sbjct: 619 AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 678
Query: 229 PNEAINYFSMMRLNGLFPDEATMVSLLQACETLHL-RRLVEAVHGVIFTCGLDENITIVT 287
EAI F M+ G PD+ T + +L AC L + + + + GL N+
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 738
Query: 288 TLLNLYSKIGRLNASCKVFAE 308
++++ + G+L+ + +V AE
Sbjct: 739 CVIDMLGRAGQLDKALRVVAE 759
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 310/554 (55%), Gaps = 4/554 (0%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R IHA VI + D + + L YLN G+ +A+ LF M KD VSW +++SG+
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
+ + +M D ++ +E+T +V+SACA + G +H A+K + V V
Sbjct: 377 FLPDKAIDTYRMMDQD-SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
N LINMY K +D A +F + +N++SW S++A N R EA+ + M++ L
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-L 494
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
P+ T+ + L AC + + +H + G+ + + LL++Y + GR+N +
Sbjct: 495 QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWS 554
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
F K D + +L+GY+ G G+ ++ F+R ++ + PD +TF LL CS S +
Sbjct: 555 QFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQM 613
Query: 365 VDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
V +G YF M D YGV P L HY+C+VDLLGR G L +A + I+ MP P+ VWGALL
Sbjct: 614 VRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
Query: 425 GASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLAR 484
A R++H I +G+ +A+++ LD YI+L N+Y+ G W + AKVR +MK L
Sbjct: 673 NACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTV 732
Query: 485 NPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEI 544
+ GCS++E K+H F+ DD HP + +I+ LE K+ E G +ES D E
Sbjct: 733 DAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEIS 792
Query: 545 KTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAK 604
+ + HSE+ A+A+GL+ + MP+ + KNL +C +CH T KF+S +R I +RDA+
Sbjct: 793 RDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAE 852
Query: 605 RFHHFSDGLCSCGD 618
FHHF DG CSCGD
Sbjct: 853 HFHHFKDGECSCGD 866
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 181/352 (51%), Gaps = 10/352 (2%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
+G+ ++ ++ G DA +F +M ++ SWN LV G++K+G M ++ M
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
++ + TF V+ C G+ VH V+ G EL + VVN LI MY K G V SA
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 202 FKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL 261
LF M ++++SWN+M++ +NG +E + F MR + PD T+ S++ ACE L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 262 HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAML 321
RRL +H + T G +I++ +L +Y G + K+F+ + + D V+ T M+
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 322 SGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGV 381
SGY + +AI + ++ ++PD +T +LSAC+ G +D G ++ +
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL-----AI 425
Query: 382 QPRLDHY----SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRV 429
+ RL Y + ++++ +C ++ A ++ N+P N W +++ R+
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRL 476
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 181/340 (53%), Gaps = 7/340 (2%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+H V++ D + + L++ Y+ G A+LLFD MP +D +SWN+++SG+ + G
Sbjct: 218 VHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGM 277
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ +F M+ L ++ + +T SVISAC L R G+ +H + G + + V N
Sbjct: 278 CHEGLELFFAMRG-LSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
+L MY G A KLF M +++VSW +M++ N P++AI+ + MM + + P
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396
Query: 247 DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF 306
DE T+ ++L AC TL +H + L + + L+N+YSK ++ + +F
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 307 AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
I + + ++ T++++G ++ EA+ F R ++ ++P+ +T T L+AC+ G +
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEALIFL-RQMKMTLQPNAITLTAALAACARIGALM 515
Query: 367 EGKHYFQVMSDVYGVQPRLDHY--SCMVDLLGRCGLLNDA 404
GK ++ + V LD + + ++D+ RCG +N A
Sbjct: 516 CGK---EIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA 552
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 128/245 (52%), Gaps = 2/245 (0%)
Query: 120 GFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGME 179
G G L M + + M+ +L + ++E F++++ C +A+EEG V+ A+
Sbjct: 68 GLCANGKLEEAMKLLNSMQ-ELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS 126
Query: 180 LQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAIN-YFSM 238
L V++ N + M+ +FG + A+ +F M+E+N+ SWN +V + G +EA+ Y M
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 239 MRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR 298
+ + G+ PD T +L+ C + + VH + G + +I +V L+ +Y K G
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 299 LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA 358
+ ++ +F + + D ++ AM+SGY +G E ++ F ++PD +T T ++SA
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 359 CSHSG 363
C G
Sbjct: 307 CELLG 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 130/289 (44%), Gaps = 4/289 (1%)
Query: 40 STYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDA 99
S P + V+ +L A + L +H IK+ + + L++ Y A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 100 QLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACAL 159
+F +P K+ +SW S+++G + MK + L+ N +T + ++ACA
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK--MTLQPNAITLTAALAACAR 510
Query: 160 AKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSM 219
A G+ +H ++ G+ L + N L++MY + G +++A+ F ++++ SWN +
Sbjct: 511 IGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNIL 569
Query: 220 VAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL 279
+ ++ G+ + + F M + + PDE T +SLL C + R + G+
Sbjct: 570 LTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGV 629
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMH 327
N+ +++L + G L + K ++ PD A+L+ +H
Sbjct: 630 TPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH 678
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 100/248 (40%), Gaps = 39/248 (15%)
Query: 59 SSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLV 118
+L C + IHA V+++ D F+ + L+ Y+ G A F+ KD SWN L+
Sbjct: 512 GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILL 570
Query: 119 SGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGM 178
+G+S+RG + +F M + +E+TFIS++ C+ ++ +G G+
Sbjct: 571 TGYSERGQGSMVVELFDRMVKS-RVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGV 629
Query: 179 ELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSM 238
+K ++++ G+ G + A K M
Sbjct: 630 TPNLKHYACVVDLLGRAGELQEAHKFIQKMP----------------------------- 660
Query: 239 MRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLD-ENITIVTTLLNLYSKIG 297
+ PD A +LL AC H L E IF LD +++ L NLY+ G
Sbjct: 661 -----VTPDPAVWGALLNACRIHHKIDLGELSAQHIFE--LDKKSVGYYILLCNLYADCG 713
Query: 298 RLNASCKV 305
+ KV
Sbjct: 714 KWREVAKV 721
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/554 (34%), Positives = 309/554 (55%), Gaps = 2/554 (0%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R++H V+ S + + IG+ LVS Y +G +++ + +MP +D V+WN+L+ G+++
Sbjct: 365 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 424
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACAL-AKAREEGQYVHCCAVKLGMELQVK 183
D ++ F M+ + + N +T +SV+SAC L E G+ +H V G E
Sbjct: 425 EDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 483
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG 243
V N+LI MY K G + S+ LF + +N+++WN+M+A +G E + S MR G
Sbjct: 484 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 543
Query: 244 LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
+ D+ + L A L + + +HG+ G + + I ++YSK G +
Sbjct: 544 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 603
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
K+ + ++S HG E F + G++P HVTF LL+ACSH G
Sbjct: 604 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 663
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGAL 423
LVD+G Y+ +++ +G++P ++H C++DLLGR G L +A+ I MP +PN VW +L
Sbjct: 664 LVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 723
Query: 424 LGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLA 483
L + +++ N+ G++AAENL L+P D Y++ SN+++ +G W D VR M K +
Sbjct: 724 LASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 783
Query: 484 RNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEE 543
+ CS+++ +K+ F + D +HP + +I+ KLE++ I+E G+V++T L D EE
Sbjct: 784 KKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEE 843
Query: 544 IKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDA 603
K + + HSE++ALAY L+ + + I KNLRIC DCH KFVS + R I++RD
Sbjct: 844 QKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQ 903
Query: 604 KRFHHFSDGLCSCG 617
RFHHF GL G
Sbjct: 904 YRFHHFERGLFGKG 917
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 227/466 (48%), Gaps = 36/466 (7%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRV-IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
P ++++L+ A S S++ V +H V KS D ++ ++ Y G ++
Sbjct: 39 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 98
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+F+EMP+++ VSW SL+ G+S +G+ + ++ M+ + + NE + VIS+C L K
Sbjct: 99 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLK 157
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
G+ + VK G+E ++ V N+LI+M G G VD A +F M+E++ +SWNS+ A
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDE---ATMVSLLQACETLHLRRLVEAVHGVIFTCG 278
QNG E+ FS+MR F DE T+ +LL + ++ +HG++ G
Sbjct: 218 AYAQNGHIEESFRIFSLMR---RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 274
Query: 279 LDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
D + + TLL +Y+ GR + VF ++ D ++ ++++ + G +A+
Sbjct: 275 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 334
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLG 396
I G ++VTFT L+AC ++G+ H V+S ++ Q + +V + G
Sbjct: 335 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN---ALVSMYG 391
Query: 397 RCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIM 456
+ G +++++ ++ MP + W AL+G AE+ DP +
Sbjct: 392 KIGEMSESRRVLLQMP-RRDVVAWNALIGG------------YAED------EDPDKALA 432
Query: 457 LSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVV 502
G+ S+ V +++ +L PG +E G +H ++V
Sbjct: 433 AFQTMRVEGVSSNYITVVSVLSACLL---PG-DLLERGKPLHAYIV 474
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 241/516 (46%), Gaps = 29/516 (5%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R I +V+KS + + L+S +MG A +FD+M +D +SWNS+ + +++
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G + +FS+M+ D E+N T +++S ++ G+ +H VK+G + V V
Sbjct: 223 GHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 281
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
NTL+ MY G A +F M ++++SWNS++A +GR +A+ M +G
Sbjct: 282 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 341
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
+ T S L AC T +HG++ GL N I L+++Y KIG ++ S +
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG- 363
V ++ + D VA A++ GYA +A+ F+ EG+ +++T +LSAC G
Sbjct: 402 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 461
Query: 364 LVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWG 421
L++ GK H + V + G + + ++ + +CG L+ +++L + N W
Sbjct: 462 LLERGKPLHAYIVSA---GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWN 517
Query: 422 ALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKV 481
A+L A+ +H E ++ L S R++ + + +S S S AAK+ L + +
Sbjct: 518 AML-AANAHHG------HGEEVLKL-VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 569
Query: 482 LARNPGCSFIEHGNKIHRFVVDDYSH------------PDSDKIHKKLEEVMSKIQEFGF 529
L EH + I D YS P ++ ++S + G+
Sbjct: 570 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 629
Query: 530 VSETESILHDVAE-EIKTNMVNKHSEKIALAYGLLV 564
E + H++ E IK V S A ++G LV
Sbjct: 630 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLV 665
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 152/312 (48%), Gaps = 11/312 (3%)
Query: 106 MPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAR-E 164
MP ++ VSWN+++SG + G M F M DL ++ + S+++AC + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACGRSGSMFR 59
Query: 165 EGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCT 224
EG VH K G+ V V ++++YG +G V + K+F M ++N+VSW S++ +
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENIT 284
G P E I+ + MR G+ +E +M ++ +C L L + G + GL+ +
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
+ +L+++ +G ++ + +F ++S+ D ++ ++ + YA +G E+ + F R
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGR----CGL 400
E + T + LLS H VD K + V V+ D C+ + L R G
Sbjct: 240 DEVNSTTVSTLLSVLGH---VDHQKWGRGIHGLV--VKMGFDSVVCVCNTLLRMYAGAGR 294
Query: 401 LNDAKELIKNMP 412
+A + K MP
Sbjct: 295 SVEANLVFKQMP 306
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 158/370 (42%), Gaps = 40/370 (10%)
Query: 47 LVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
+VS L L L + +HA ++ + D + + L++ Y G +Q LF+ +
Sbjct: 449 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 508
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 166
N++ ++WN++++ + G + + S M+S + L++ +F +SA A EEG
Sbjct: 509 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS-FGVSLDQFSFSEGLSAAAKLAVLEEG 567
Query: 167 QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
Q +H AVKLG E + N +MY K G + K+ +++ SWN +++ ++
Sbjct: 568 QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRH 627
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT-CGLDENITI 285
G E F M G+ P T VSLL AC L A + +I GL+ I
Sbjct: 628 GYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEH 687
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
+++L + GRL EA F + M
Sbjct: 688 CICVIDLLGRSGRL-------------------------------AEAETFISKMP---M 713
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH-YSCMVDLLGRCGLLNDA 404
+P+ + + LL++C G +D G+ + +S ++P D Y ++ G D
Sbjct: 714 KPNDLVWRSLLASCKIHGNLDRGRKAAENLSK---LEPEDDSVYVLSSNMFATTGRWEDV 770
Query: 405 KELIKNMPFE 414
+ + K M F+
Sbjct: 771 ENVRKQMGFK 780
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/624 (32%), Positives = 333/624 (53%), Gaps = 68/624 (10%)
Query: 64 CRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPD----AQLLFDEMPNKDFVSWNSLVS 119
C HA +KS + + LVS Y ++P A+ +FDE+ KD SW ++++
Sbjct: 168 CVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMT 227
Query: 120 GFSKRG--DLGN----------CMSVFSVMKSDL-------------------DLELNEL 148
G+ K G DLG + ++ M S +EL+E
Sbjct: 228 GYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 149 TFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM 208
T+ SVI ACA A + G+ VH ++ + N+L+++Y K G D A +F M
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKM 346
Query: 209 TEQNMVSWNS-------------------------------MVAVCTQNGRPNEAINYFS 237
+++VSWN+ M++ +NG E + FS
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406
Query: 238 MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
M+ G P + +++C L + H + G D +++ L+ +Y+K G
Sbjct: 407 CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 466
Query: 298 RLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLS 357
+ + +VF + D V+ A+++ HG G EA+ +E +++G+ PD +T +L+
Sbjct: 467 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Query: 358 ACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNS 417
ACSH+GLVD+G+ YF M VY + P DHY+ ++DLL R G +DA+ +I+++PF+P +
Sbjct: 527 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 586
Query: 418 GVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALM 477
+W ALL RV+ N+ +G AA+ L L P Y++LSN+++A+G W + A+VR LM
Sbjct: 587 EIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLM 646
Query: 478 KTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESIL 537
+ + + + CS+IE ++H F+VDD SHP+++ ++ L+++ +++ G+V +T +L
Sbjct: 647 RDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVL 706
Query: 538 HDV-AEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKR 596
HDV ++ K +M+ HSEKIA+A+GL+ + I KNLR C DCH +F+S + +R
Sbjct: 707 HDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQR 766
Query: 597 TIIIRDAKRFHHFSDGLCSCGDYW 620
II+RD KRFHHF +G CSCG++W
Sbjct: 767 DIILRDRKRFHHFRNGECSCGNFW 790
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 160/354 (45%), Gaps = 51/354 (14%)
Query: 41 TYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQ 100
TYP +++ A ++ L + +HA V++ D+ F + LVS Y G +A+
Sbjct: 288 TYP------SVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEAR 340
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNC------------------------------ 130
+F++MP KD VSWN+L+SG+ G +G
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 131 -MSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
+ +FS MK + E + F I +CA+ A GQ H +K+G + + N LI
Sbjct: 401 GLKLFSCMKRE-GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALI 459
Query: 190 NMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
MY K G V+ A ++F M + VSWN+++A Q+G EA++ + M G+ PD
Sbjct: 460 TMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 250 TMVSLLQACETLHL----RRLVEAVHGVI-FTCGLDENITIVTTLLNLYSKIGRLNASCK 304
T++++L AC L R+ +++ V G D L++L + G+ + +
Sbjct: 520 TLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH----YARLIDLLCRSGKFSDAES 575
Query: 305 VFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLS 357
V + KP A+LSG +HG I ++ G+ P+H LLS
Sbjct: 576 VIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GLIPEHDGTYMLLS 627
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 59/135 (43%), Gaps = 37/135 (27%)
Query: 261 LHLRR----LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVA 316
L LRR L AVHG I T G I+ L+++Y K LN + ++F EIS+PDK+A
Sbjct: 23 LPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIA 82
Query: 317 CTAMLSGYAMHG--------------C-------------------GTEAIQFFERTIRE 343
T M+SGY G C G AI F + E
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 344 GMEPDHVTFTHLLSA 358
G +PD+ TF +L+
Sbjct: 143 GFKPDNFTFASVLAG 157
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/567 (36%), Positives = 310/567 (54%), Gaps = 33/567 (5%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
LV Y+ A A+ LFDE + N++ S + ++G + VF++M D +
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM-DSGVRP 335
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF 205
+ ++ +S IS+C+ + G+ H ++ G E + N LI+MY K D+AF++F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPN-------------------------------EAIN 234
M+ + +V+WNS+VA +NG + EAI
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 235 YF-SMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLY 293
F SM G+ D TM+S+ AC L L + ++ I G+ ++ + TTL++++
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 294 SKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFT 353
S+ G ++ +F ++ D A TA + AM G AI+ F+ I +G++PD V F
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 354 HLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPF 413
L+ACSH GLV +GK F M ++GV P HY CMVDLLGR GLL +A +LI++MP
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 414 EPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKV 473
EPN +W +LL A RV N+ + AAE + L P +Y++LSN+Y+++G W+D AKV
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 695
Query: 474 RALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSET 533
R MK K L + PG S I+ K H F D SHP+ I L+EV + G V +
Sbjct: 696 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 755
Query: 534 ESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLI 593
++L DV E+ K M+++HSEK+A+AYGL+ S + I+KNLR+C DCH AKF S +
Sbjct: 756 SNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 815
Query: 594 EKRTIIIRDAKRFHHFSDGLCSCGDYW 620
R II+RD RFH+ G CSCGD+W
Sbjct: 816 YNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 33/365 (9%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
IH ++K +D F+ + LV Y G A+ +FDEM ++ VSW S++ G+++R
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ + +F M D ++ N +T + VISACA + E G+ V+ G+E+ +V+
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
L++MY K +D A +LF N+ N+M + + G EA+ F++M +G+ P
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 247 DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF 306
D +M+S + +C L ++ HG + G + I L+++Y K R + + ++F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 307 AEISKPDKVACTAMLSGYAMHGCGTEAIQFFE----------RTI--------------- 341
+S V ++++GY +G A + FE TI
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 342 -------REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDL 394
+EG+ D VT + SAC H G +D K + + + G+Q + + +VD+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLVDM 514
Query: 395 LGRCG 399
RCG
Sbjct: 515 FSRCG 519
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 132/249 (53%), Gaps = 2/249 (0%)
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCA 173
+NSL+ G++ G + +F M + + ++ TF +SACA ++A+ G +H
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNS-GISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 174 VKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAI 233
VK+G + V N+L++ Y + G +DSA K+F M+E+N+VSW SM+ + +A+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 234 N-YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNL 292
+ +F M+R + P+ TMV ++ AC L E V+ I G++ N +V+ L+++
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 293 YSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTF 352
Y K ++ + ++F E + C AM S Y G EA+ F + G+ PD ++
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 353 THLLSACSH 361
+S+CS
Sbjct: 341 LSAISSCSQ 349
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 35/334 (10%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
R+ + + + +V+ Y+ G A F+ MP K+ VSWN+++SG +
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 130 CMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
+ VF M+S + + +T +S+ SAC A + ++++ K G++L V++ TL+
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 190 NMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
+M+ + G +SA +F ++T +++ +W + + G AI F M GL PD
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
V L AC HG + G + I ++L L+
Sbjct: 573 AFVGALTACS-----------HGGLVQQGKE----IFYSMLKLHG--------------- 602
Query: 310 SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
P+ V M+ G EA+Q E MEP+ V + LL+AC G V+
Sbjct: 603 VSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 370 HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLND 403
+ + + + R Y + ++ G ND
Sbjct: 660 YAAEKIQVL--APERTGSYVLLSNVYASAGRWND 691
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 253 SLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKP 312
S L+ C+T+ ++ H + GLD +++ +T L+ ++G S E+ +
Sbjct: 37 SSLKNCKTIDELKMF---HRSLTKQGLDNDVSTITKLVARSCELG-TRESLSFAKEVFEN 92
Query: 313 DKVACT-----AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDE 367
+ T +++ GYA G EAI F R + G+ PD TF LSAC+ S
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 368 GKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
G ++ + G L + +V CG L+ A+++ M E N W +++
Sbjct: 153 GIQIHGLIVKM-GYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVVSWTSMI 207
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/585 (34%), Positives = 315/585 (53%), Gaps = 1/585 (0%)
Query: 36 FHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGA 95
F S + P + + + + + +S + + H +K F+ + LV Y
Sbjct: 127 FFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSG 186
Query: 96 TPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS 155
+A + D++P D ++S +SG+ + G + V ++ D N LT++S +
Sbjct: 187 NGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANE-DFVWNNLTYLSSLR 245
Query: 156 ACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVS 215
+ + VH V+ G +V+ LINMYGK G V A ++F QN+
Sbjct: 246 LFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFL 305
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
+++ Q+ EA+N FS M + P+E T LL + L L + + +HG++
Sbjct: 306 NTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVL 365
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
G ++ + L+N+Y+K G + + K F+ ++ D V M+SG + HG G EA++
Sbjct: 366 KSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALE 425
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
F+R I G P+ +TF +L ACSH G V++G HYF + + VQP + HY+C+V LL
Sbjct: 426 AFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLL 485
Query: 396 GRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYI 455
+ G+ DA++ ++ P E + W LL A V N +GK+ AE I P+D Y+
Sbjct: 486 SKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYV 545
Query: 456 MLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHK 515
+LSNI++ S W AKVR+LM + + + PG S+I N+ H F+ +D HP+ I+
Sbjct: 546 LLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYA 605
Query: 516 KLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIK 575
K++EVMSKI+ G+ + HDV EE + + ++ HSEK+A+AYGL+ + PL + K
Sbjct: 606 KVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTK 665
Query: 576 NLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
N+RIC DCH K +S I KR I+IRD+ RFHHF DG CSC DYW
Sbjct: 666 NVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 175/407 (42%), Gaps = 13/407 (3%)
Query: 40 STYPRDPLVSTLLVALKSSSSLYCCRVIHARVI---KSLDYRDGFIGDQLVSCYLNMGAT 96
+ +P D L + LL +SS L IHA +I +S D + + L++ Y+ T
Sbjct: 27 TPFPIDRL-NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRET 85
Query: 97 PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 156
A+ LFD MP ++ VSW +++ G+ G + +F M + NE V +
Sbjct: 86 VRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKS 145
Query: 157 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSW 216
C+ + EEG+ H C +K G+ V NTL+ MY A ++ + ++ +
Sbjct: 146 CSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVF 205
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT 276
+S ++ + G E ++ + T +S L+ L L VH +
Sbjct: 206 SSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR 265
Query: 277 CGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQF 336
G + + L+N+Y K G++ + +VF + + T ++ Y EA+
Sbjct: 266 FGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNL 325
Query: 337 FERTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDL 394
F + + + P+ TF LL++ + L+ +G H + S G + + + +V++
Sbjct: 326 FSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS---GYRNHVMVGNALVNM 382
Query: 395 LGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAE 441
+ G + DA++ M F + W ++ + +G+EA E
Sbjct: 383 YAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHH---GLGREALE 425
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/508 (36%), Positives = 293/508 (57%), Gaps = 2/508 (0%)
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCA 173
+N+++ G+ + ++ M + E + T+ ++ AC K+ EG+ +H
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGN-EPDNFTYPCLLKACTRLKSIREGKQIHGQV 158
Query: 174 VKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAI 233
KLG+E V V N+LINMYG+ G ++ + +F + + SW+SMV+ G +E +
Sbjct: 159 FKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECL 218
Query: 234 NYF-SMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNL 292
F M L +E+ MVS L AC L ++HG + + NI + T+L+++
Sbjct: 219 LLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDM 278
Query: 293 YSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTF 352
Y K G L+ + +F ++ K + + +AM+SG A+HG G A++ F + I+EG+EPDHV +
Sbjct: 279 YVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVY 338
Query: 353 THLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP 412
+L+ACSHSGLV EG+ F M V+P +HY C+VDLLGR GLL +A E I+++P
Sbjct: 339 VSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIP 398
Query: 413 FEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAK 472
E N +W L RV NI +G+ AA+ L+ L +P +Y+++SN+YS +W D A+
Sbjct: 399 IEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVAR 458
Query: 473 VRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSE 532
R + K L + PG S +E K HRFV D SHP +I+K L ++ +++ G+ +
Sbjct: 459 TRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPD 518
Query: 533 TESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSL 592
IL +V EE K + HS+K+A+A+GLL + + I +NLR+C DCH K +S+
Sbjct: 519 LTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISM 578
Query: 593 IEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
I +R I++RD RFH F G CSC DYW
Sbjct: 579 IYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 6/218 (2%)
Query: 41 TYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQ 100
TYP LL A S+ + IH +V K D F+ + L++ Y G +
Sbjct: 134 TYP------CLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSS 187
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
+F+++ +K SW+S+VS + G C+ +F M S+ +L+ E +S + ACA
Sbjct: 188 AVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANT 247
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV 220
A G +H ++ EL + V +L++MY K G +D A +F M ++N +++++M+
Sbjct: 248 GALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMI 307
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQAC 258
+ +G A+ FS M GL PD VS+L AC
Sbjct: 308 SGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNAC 345
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 210/584 (35%), Positives = 329/584 (56%), Gaps = 16/584 (2%)
Query: 51 LLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKD 110
L+ L S++ ++H +K D F + LV Y+ + A+ LFDEM +
Sbjct: 35 LVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPN 94
Query: 111 FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC-ALAKAREEGQYV 169
VSW S++SG++ G N +S+F M D + NE TF SV AC ALA++R G+ +
Sbjct: 95 VVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRI-GKNI 153
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE--QNMVSWNSMVAVCTQNG 227
H G+ + V ++L++MYGK V++A ++F +M +N+VSW SM+ QN
Sbjct: 154 HARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNA 213
Query: 228 RPNEAINYFSMMRLNGLFPDEAT---MVSLLQACETLHLRRLVEAVHGVIFTCGLDENIT 284
R +EAI F L D A + S++ AC +L + + HG++ G + N
Sbjct: 214 RGHEAIELFRSFNA-ALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTV 272
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
+ T+LL++Y+K G L+ + K+F I ++ T+M+ A HG G A++ F+ +
Sbjct: 273 VATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGR 332
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
+ P++VT +L ACSHSGLV+EG Y +M++ YGV P HY+C+VD+LGR G +++A
Sbjct: 333 INPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEA 392
Query: 405 KELIKNMPFEPNSG--VWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYS 462
EL K + G +WGALL A R++ + I EA++ LI + YI LSN Y+
Sbjct: 393 YELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYA 452
Query: 463 ASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMS 522
SG W D+ +R MK + CS+IE+ + ++ F D S +S +I + L+++
Sbjct: 453 VSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEK 512
Query: 523 KIQEFGF------VSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKN 576
+++E G ++ + S+ DV EE K MV+ H E++ALAYGLL A + I+ N
Sbjct: 513 RMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNN 572
Query: 577 LRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
LR+CRDCH+ K +S I +R I++RD RFH F +G C+C DYW
Sbjct: 573 LRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 305/529 (57%), Gaps = 12/529 (2%)
Query: 94 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
G +A+L+FDEM ++ V+W ++++G+ + + +F VM E E+++ S+
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP-----EKTEVSWTSM 240
Query: 154 ISACALAKAREEGQ-YVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQN 212
+ L+ E+ + + +K V N +I +G+ G + A ++F M +++
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPMK-----PVIACNAMIVGFGEVGEISKARRVFDLMEDRD 295
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
+W M+ + G EA++ F+ M+ G+ P +++S+L C TL + VH
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 273 VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTE 332
+ C D+++ + + L+ +Y K G L + VF S D + +++SGYA HG G E
Sbjct: 356 HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEE 415
Query: 333 AIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMV 392
A++ F G P+ VT +L+ACS++G ++EG F+ M + V P ++HYSC V
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTV 475
Query: 393 DLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPR 452
D+LGR G ++ A ELI++M +P++ VWGALLGA + + + + + AA+ L +P +
Sbjct: 476 DMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAG 535
Query: 453 NYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDY-SHPDSD 511
Y++LS+I ++ W D A VR M+T +++ PGCS+IE G K+H F +HP+
Sbjct: 536 TYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQA 595
Query: 512 KIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPL 571
I LE+ ++E G+ + +LHDV EE K + +++HSE++A+AYGLL +P+
Sbjct: 596 MILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPI 655
Query: 572 VIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
++KNLR+C DCH K +S + +R II+RDA RFHHF++G CSC DYW
Sbjct: 656 RVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 128/308 (41%), Gaps = 52/308 (16%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
+ SL ++ + +VS Y + G +A+ LFDEM ++ VSWN LVSG+ K +
Sbjct: 38 KFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVE 97
Query: 130 CMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
+VF +M +V+S A+ K
Sbjct: 98 ARNVFELMPER-----------NVVSWTAMVKG--------------------------- 119
Query: 190 NMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
Y + G V A LFW M E+N VSW M +GR ++A + MM + +
Sbjct: 120 --YMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTN 177
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
+ L + R +IF + N+ TT++ Y + R++ + K+F +
Sbjct: 178 MIGGLCREGRVDEAR--------LIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM 229
Query: 310 SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
+ +V+ T+ML GY + G +A +FFE M+P + ++ G + + +
Sbjct: 230 PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMKP-VIACNAMIVGFGEVGEISKAR 285
Query: 370 HYFQVMSD 377
F +M D
Sbjct: 286 RVFDLMED 293
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 97/188 (51%), Gaps = 3/188 (1%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P P + ++L + +SL R +HA +++ D ++ L++ Y+ G A+L+
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD +KD + WNS++SG++ G + +F M S + N++T I++++AC+ A
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMP-NKVTLIAILTACSYAGK 447
Query: 163 REEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSMV 220
EEG + K + V+ + ++M G+ G VD A +L +MT + + W +++
Sbjct: 448 LEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Query: 221 AVCTQNGR 228
C + R
Sbjct: 508 GACKTHSR 515
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 100/252 (39%), Gaps = 36/252 (14%)
Query: 189 INMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMM------RLN 242
I+ + G ++ A K F ++ + + SWNS+V+ NG P EA F M N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 243 GL---FPDEATMVSLLQACETLHLRRLVEAVHGV--------------IFTCGLDENITI 285
GL + +V E + R +V V +F + N
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
T + GR++ + K++ + D VA T M+ G G EA F+ E
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFD----EMR 199
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC--GLLND 403
E + VT+T +++ + VD + F+VM P S LLG G + D
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVM-------PEKTEVSWTSMLLGYTLSGRIED 252
Query: 404 AKELIKNMPFEP 415
A+E + MP +P
Sbjct: 253 AEEFFEVMPMKP 264
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 206/566 (36%), Positives = 309/566 (54%), Gaps = 33/566 (5%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
LV Y+ A A+ LFDE + N++ S + ++G + VF++M D +
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM-DSGVRP 335
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF 205
+ ++ +S IS+C+ + G+ H ++ G E + N LI+MY K D+AF++F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPN-------------------------------EAIN 234
M+ + +V+WNS+VA +NG + EAI
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 235 YF-SMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLY 293
F SM G+ D TM+S+ AC L L + ++ I G+ ++ + TTL++++
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 294 SKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFT 353
S+ G ++ +F ++ D A TA + AM G AI+ F+ I +G++PD V F
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 354 HLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPF 413
L+ACSH GLV +GK F M ++GV P HY CMVDLLGR GLL +A +LI++MP
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 414 EPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKV 473
EPN +W +LL A RV N+ + AAE + L P +Y++LSN+Y+++G W+D AKV
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 695
Query: 474 RALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSET 533
R MK K L + PG S I+ K H F D SHP+ I L+EV + G V +
Sbjct: 696 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 755
Query: 534 ESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLI 593
++L DV E+ K M+++HSEK+A+AYGL+ S + I+KNLR+C DCH AKF S +
Sbjct: 756 SNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 815
Query: 594 EKRTIIIRDAKRFHHFSDGLCSCGDY 619
R II+RD RFH+ G CSCGD+
Sbjct: 816 YNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 33/365 (9%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
IH ++K +D F+ + LV Y G A+ +FDEM ++ VSW S++ G+++R
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ + +F M D ++ N +T + VISACA + E G+ V+ G+E+ +V+
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
L++MY K +D A +LF N+ N+M + + G EA+ F++M +G+ P
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 247 DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF 306
D +M+S + +C L ++ HG + G + I L+++Y K R + + ++F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 307 AEISKPDKVACTAMLSGYAMHGCGTEAIQFFE----------RTI--------------- 341
+S V ++++GY +G A + FE TI
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 342 -------REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDL 394
+EG+ D VT + SAC H G +D K + + + G+Q + + +VD+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLVDM 514
Query: 395 LGRCG 399
RCG
Sbjct: 515 FSRCG 519
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 132/249 (53%), Gaps = 2/249 (0%)
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCA 173
+NSL+ G++ G + +F M + + ++ TF +SACA ++A+ G +H
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNS-GISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 174 VKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAI 233
VK+G + V N+L++ Y + G +DSA K+F M+E+N+VSW SM+ + +A+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 234 N-YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNL 292
+ +F M+R + P+ TMV ++ AC L E V+ I G++ N +V+ L+++
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 293 YSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTF 352
Y K ++ + ++F E + C AM S Y G EA+ F + G+ PD ++
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 353 THLLSACSH 361
+S+CS
Sbjct: 341 LSAISSCSQ 349
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 35/334 (10%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
R+ + + + +V+ Y+ G A F+ MP K+ VSWN+++SG +
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 130 CMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
+ VF M+S + + +T +S+ SAC A + ++++ K G++L V++ TL+
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 190 NMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
+M+ + G +SA +F ++T +++ +W + + G AI F M GL PD
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
V L AC HG + G + I ++L L+
Sbjct: 573 AFVGALTACS-----------HGGLVQQGKE----IFYSMLKLHG--------------- 602
Query: 310 SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
P+ V M+ G EA+Q E MEP+ V + LL+AC G V+
Sbjct: 603 VSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 370 HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLND 403
+ + + + R Y + ++ G ND
Sbjct: 660 YAAEKIQVL--APERTGSYVLLSNVYASAGRWND 691
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 253 SLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKP 312
S L+ C+T+ ++ H + GLD +++ +T L+ ++G S E+ +
Sbjct: 37 SSLKNCKTIDELKMF---HRSLTKQGLDNDVSTITKLVARSCELG-TRESLSFAKEVFEN 92
Query: 313 DKVACT-----AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDE 367
+ T +++ GYA G EAI F R + G+ PD TF LSAC+ S
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 368 GKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
G ++ + G L + +V CG L+ A+++ M E N W +++
Sbjct: 153 GIQIHGLIVKM-GYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVVSWTSMI 207
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 357 bits (916), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 307/548 (56%), Gaps = 10/548 (1%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPN-KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD 140
+ + V+ Y G +A +F M +D VSWNS++ + + + ++++ M
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 141 LDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
+++ T SV++A G+ H +K G V + LI+ Y K G D
Sbjct: 235 -GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDG 293
Query: 201 AF---KLFWAMTEQNMVSWNSMVAVCTQNGR-PNEAINYFSMMRLNGLFPDEATMVSLLQ 256
+ K+F + ++V WN+M++ + N EA+ F M+ G PD+ + V +
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTS 353
Query: 257 ACETLHLRRLVEAVHGVIFTCGLDEN-ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKV 315
AC L + +HG+ + N I++ L++LY K G L + VF + + + V
Sbjct: 354 ACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAV 413
Query: 316 ACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVM 375
+ M+ GYA HG GTEA+ ++R + G+ P+ +TF +LSAC+H G VDEG+ YF M
Sbjct: 414 SFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTM 473
Query: 376 SDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISI 435
+ + ++P +HYSCM+DLLGR G L +A+ I MP++P S W ALLGA R + N+++
Sbjct: 474 KETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMAL 533
Query: 436 GKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGN 495
+ AA L+ + P Y+ML+N+Y+ + W + A VR M+ K + + PGCS+IE
Sbjct: 534 AERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKK 593
Query: 496 KIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNM---VNKH 552
K H FV +D+SHP ++++ LEE+M K+++ G+V + + + E + + + H
Sbjct: 594 KKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHH 653
Query: 553 SEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDG 612
SEK+A+A+GL+ + LV++KNLRIC DCH KF+S + R II+RD RFH F DG
Sbjct: 654 SEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDG 713
Query: 613 LCSCGDYW 620
CSCGDYW
Sbjct: 714 KCSCGDYW 721
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 168/356 (47%), Gaps = 9/356 (2%)
Query: 63 CCRVIHARV-IKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGF 121
C R+ +AR S + + F + +V Y A+ LFDE+P D VS+N+L+SG+
Sbjct: 56 CGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGY 115
Query: 122 SKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQ 181
+ + M +F M+ L E++ T +I+AC + + +HC +V G +
Sbjct: 116 ADARETFAAMVLFKRMRK-LGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSY 172
Query: 182 VKVVNTLINMYGKFGFVDSAFKLFWAMTE-QNMVSWNSMVAVCTQNGRPNEAINYFSMMR 240
V N + Y K G + A +F+ M E ++ VSWNSM+ Q+ +A+ + M
Sbjct: 173 SSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMI 232
Query: 241 LNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
G D T+ S+L A +L HG + G +N + + L++ YSK G +
Sbjct: 233 FKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCD 292
Query: 301 A---SCKVFAEISKPDKVACTAMLSGYAMH-GCGTEAIQFFERTIREGMEPDHVTFTHLL 356
S KVF EI PD V M+SGY+M+ EA++ F + R G PD +F +
Sbjct: 293 GMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVT 352
Query: 357 SACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP 412
SACS+ + K + + R+ + ++ L + G L DA+ + MP
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 198/597 (33%), Positives = 329/597 (55%), Gaps = 38/597 (6%)
Query: 60 SLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVS 119
+L + +HA ++K + + + LV+ Y GA A +FDEMP++D ++W S+++
Sbjct: 18 TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLT 77
Query: 120 GFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGME 179
++ G +SVFS + S L ++ F +++ ACA + + G+ VHC +
Sbjct: 78 ALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYA 137
Query: 180 LQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMM 239
V ++L++MY K G ++SA +F ++ +N +SW +MV+ ++GR EA+ F ++
Sbjct: 138 NDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRIL 197
Query: 240 RLNGLFP--------------------------------DEATMVSLLQACETLHLRRLV 267
+ L+ D + S++ AC L
Sbjct: 198 PVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAG 257
Query: 268 EAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMH 327
VHG++ G D + I L+++Y+K + A+ +F+ + D V+ T+++ G A H
Sbjct: 258 RQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQH 317
Query: 328 GCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH 387
G +A+ ++ + G++P+ VTF L+ ACSH G V++G+ FQ M+ YG++P L H
Sbjct: 318 GQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQH 377
Query: 388 YSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLI-AL 446
Y+C++DLLGR GLL++A+ LI MPF P+ W ALL A + +G A++L+ +
Sbjct: 378 YTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSF 437
Query: 447 DPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYS 506
DP YI+LSNIY+++ LW ++ R + + ++PG S +E + F + S
Sbjct: 438 KLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETS 497
Query: 507 HP---DSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLL 563
HP D ++ KKLEE M +I+ G+V +T ILHD+ E+ K ++ HSE+ A+AYGLL
Sbjct: 498 HPLKEDIFRLLKKLEEEM-RIRN-GYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLL 555
Query: 564 VSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+ P+ I+KNLR+C DCH K +S I +R II+RDA R+HHF G CSC D+W
Sbjct: 556 KAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 157/336 (46%), Gaps = 8/336 (2%)
Query: 39 ISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPD 98
+S Y D +V + LV + + L V S+ ++ +VS Y G +
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSA---KAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 99 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 158
A LF +P K+ SW +L+SGF + G SVF+ M+ + L+ L S++ ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 159 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNS 218
A G+ VH + LG + V + N LI+MY K V +A +F M +++VSW S
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 219 MVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL-HLRRLVEAVHGVIFTC 277
++ Q+G+ +A+ + M +G+ P+E T V L+ AC + + + E +
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQF 336
G+ ++ T LL+L + G L+ + + + PD+ A+LS G G I+
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 337 FERTIREGMEPDHVTF---THLLSACSHSGLVDEGK 369
+ + D T+ +++ ++ S G V E +
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR 465
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 12/255 (4%)
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
++ + CA + + +H VKLG+ + NTL+N+YGK G A ++F M
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 210 EQNMVSWNSMVAVCTQNGRPNEAI-NYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVE 268
++ ++W S++ Q + + + S+ +GL PD+ +L++AC L
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 269 AVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHG 328
VH + + ++L+++Y+K G LN++ VF I + ++ TAM+SGYA G
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 329 CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY 388
EA++ F + + ++T L+S SG +G F V +++ + R+D
Sbjct: 186 RKEEALELFRILPVKNL----YSWTALISGFVQSG---KGLEAFSVFTEMR--RERVDIL 236
Query: 389 SCMV--DLLGRCGLL 401
+V ++G C L
Sbjct: 237 DPLVLSSIVGACANL 251
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 310/551 (56%), Gaps = 5/551 (0%)
Query: 71 VIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNC 130
VI L+ + F+G LV Y+ G T +A+L+ D + KD V +L+ G+S++G+
Sbjct: 192 VILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEA 251
Query: 131 MSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLIN 190
+ F M + ++ NE T+ SV+ +C K G+ +H VK G E + +L+
Sbjct: 252 VKAFQSMLVE-KVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLT 310
Query: 191 MYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
MY + VD + ++F + N VSW S+++ QNGR A+ F M + + P+ T
Sbjct: 311 MYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFT 370
Query: 251 MVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
+ S L+ C L + +HG++ G D + + L++LY K G + + VF +S
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS 430
Query: 311 KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKH 370
+ D ++ M+ YA +G G EA+ FER I G++P+ VT +L AC++S LV+EG
Sbjct: 431 EVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCE 490
Query: 371 YFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVY 430
F + DHY+CMVDLLGR G L +A E++ P+ +W LL A +V+
Sbjct: 491 LFDSFRK-DKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVH 548
Query: 431 HNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSF 490
+ + + ++ ++P D I++SN+Y+++G W+ ++++ MK L +NP S+
Sbjct: 549 RKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSW 608
Query: 491 IEHGNKIHRFVVDD-YSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMV 549
+E + H F+ D +SHP+S++I + LEE++ K ++ G+V + + D+ E K +
Sbjct: 609 VEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSL 668
Query: 550 NKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHF 609
++HSEK+A+A+ + + + I+KNLR+C DCH K VS + KR II RD+KRFHHF
Sbjct: 669 HQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHF 727
Query: 610 SDGLCSCGDYW 620
DG CSCGDYW
Sbjct: 728 RDGSCSCGDYW 738
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 176/352 (50%), Gaps = 4/352 (1%)
Query: 49 STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPN 108
S LL S+ + I A ++KS + G +LV L G A+ +FD M
Sbjct: 69 SQLLRQCIDERSISGIKTIQAHMLKS-GFPAEISGSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 109 KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQY 168
+ V+WNSL++ K + ++ +M ++ ++ +E T SV A + +E Q
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN-NVLPDEYTLSSVFKAFSDLSLEKEAQR 186
Query: 169 VHCCAVKLGMEL-QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNG 227
H AV LG+E+ V V + L++MY KFG A + + E+++V +++ +Q G
Sbjct: 187 SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 228 RPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVT 287
EA+ F M + + P+E T S+L +C L + +HG++ G + + T
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQT 306
Query: 288 TLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
+LL +Y + ++ S +VF I P++V+ T+++SG +G A+ F + +R+ ++P
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKP 366
Query: 348 DHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
+ T + L CS+ + +EG+ +++ YG S ++DL G+CG
Sbjct: 367 NSFTLSSALRGCSNLAMFEEGRQIHGIVTK-YGFDRDKYAGSGLIDLYGKCG 417
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 131/242 (54%), Gaps = 7/242 (2%)
Query: 188 LINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPD 247
L++ K G +D A ++F M+E+++V+WNS++A ++ R EA+ + +M N + PD
Sbjct: 105 LVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPD 164
Query: 248 EATMVSLLQACETLHLRRLVEAVHGVIFTCGLD-ENITIVTTLLNLYSKIGRLNASCKVF 306
E T+ S+ +A L L + + HG+ GL+ N+ + + L+++Y K G+ + V
Sbjct: 165 EYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVL 224
Query: 307 AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
+ + D V TA++ GY+ G TEA++ F+ + E ++P+ T+ +L +C + +
Sbjct: 225 DRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIG 284
Query: 367 EGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
GK H V S G + L + ++ + RC L++D+ + K + + PN W +L+
Sbjct: 285 NGKLIHGLMVKS---GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLI 340
Query: 425 GA 426
Sbjct: 341 SG 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 4/193 (2%)
Query: 34 VRFHSISTYPRDPLVSTLLVALKSSSSLYC---CRVIHARVIKSLDYRDGFIGDQLVSCY 90
+ F + P TL AL+ S+L R IH V K RD + G L+ Y
Sbjct: 354 IEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLY 413
Query: 91 LNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTF 150
G + A+L+FD + D +S N+++ +++ G + +F M +L L+ N++T
Sbjct: 414 GKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM-INLGLQPNDVTV 472
Query: 151 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE 210
+SV+ AC ++ EEG + K + L ++++ G+ G ++ A L +
Sbjct: 473 LSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVIN 532
Query: 211 QNMVSWNSMVAVC 223
++V W ++++ C
Sbjct: 533 PDLVLWRTLLSAC 545
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 308/576 (53%), Gaps = 6/576 (1%)
Query: 50 TLLVALKSSSSL---YCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
T A K+ +SL + IHA +K D F+G Y DA+ LFDE+
Sbjct: 110 TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 169
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 166
P ++ +WN+ +S G + F + +D N +TF + ++AC+ G
Sbjct: 170 PERNLETWNAFISNSVTDGRPREAIEAFIEFRR-IDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 167 QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
+H ++ G + V V N LI+ YGK + S+ +F M +N VSW S+VA QN
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIV 286
+A + R + + + + S+L AC + L ++H ++ I +
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 287 TTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM- 345
+ L+++Y K G + S + F E+ + + V +++ GYA G A+ FE G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 346 -EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
P+++TF LLSACS +G V+ G F M YG++P +HYSC+VD+LGR G++ A
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468
Query: 405 KELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSAS 464
E IK MP +P VWGAL A R++ +G AAENL LDP D N+++LSN ++A+
Sbjct: 469 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 528
Query: 465 GLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKI 524
G W++A VR +K + + G S+I N++H F D SH + +I L ++ +++
Sbjct: 529 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 588
Query: 525 QEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCH 584
+ G+ + + L+D+ EE K V+ HSEK+ALA+GLL +P+ I KNLRIC DCH
Sbjct: 589 EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCH 648
Query: 585 KTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
KFVS KR II+RD RFH F DG+CSC DYW
Sbjct: 649 SFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 201/411 (48%), Gaps = 10/411 (2%)
Query: 57 SSSSLYCCRVIHARVIKSLDYRDG-FIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWN 115
S+SS+ RV+HAR++K+LD F+ + L++ Y + A+L+ P ++ VSW
Sbjct: 18 SASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWT 77
Query: 116 SLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVK 175
SL+SG ++ G + F M+ + + N+ TF A A + G+ +H AVK
Sbjct: 78 SLISGLAQNGHFSTALVEFFEMRRE-GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVK 136
Query: 176 LGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINY 235
G L V V + +MY K D A KLF + E+N+ +WN+ ++ +GRP EAI
Sbjct: 137 CGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEA 196
Query: 236 FSMMRLNGLFPDEATMVSLLQAC-ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
F R P+ T + L AC + LHL L +HG++ G D ++++ L++ Y
Sbjct: 197 FIEFRRIDGHPNSITFCAFLNACSDWLHL-NLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 255
Query: 295 KIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTH 354
K ++ +S +F E+ + V+ ++++ Y + +A + R+ ++ +E +
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISS 315
Query: 355 LLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP 412
+LSAC+ ++ G+ H V + V+ + S +VD+ G+CG + D+++ MP
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKA---CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 413 FEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSA 463
E N +L+G + + E + NY+ ++ SA
Sbjct: 373 -EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 422
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
Query: 45 DPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFD 104
D ++S++L A + L R IHA +K+ R F+G LV Y G D++ FD
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFD 369
Query: 105 EMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS-DLDLELNELTFISVISACALAKAR 163
EMP K+ V+ NSL+ G++ +G + +++F M N +TF+S++SAC+ A A
Sbjct: 370 EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429
Query: 164 EEGQYV-HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVS-WNSMVA 221
E G + G+E + + +++M G+ G V+ A++ M Q +S W ++
Sbjct: 430 ENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQN 489
Query: 222 VCTQNGRPN 230
C +G+P
Sbjct: 490 ACRMHGKPQ 498
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 3/230 (1%)
Query: 31 ETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCY 90
E + F I +P L A L +H V++S D + + L+ Y
Sbjct: 195 EAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFY 254
Query: 91 LNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTF 150
++++F EM K+ VSW SLV+ + + + ++ + D+ +E ++
Sbjct: 255 GKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI-VETSDFMI 313
Query: 151 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE 210
SV+SACA E G+ +H AVK +E + V + L++MYGK G ++ + + F M E
Sbjct: 314 SSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE 373
Query: 211 QNMVSWNSMVAVCTQNGRPNEAINYFSMM--RLNGLFPDEATMVSLLQAC 258
+N+V+ NS++ G+ + A+ F M R G P+ T VSLL AC
Sbjct: 374 KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSAC 423
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 352 bits (903), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 195/608 (32%), Positives = 324/608 (53%), Gaps = 40/608 (6%)
Query: 52 LVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVS-CYLNMGATPDAQLL------FD 104
L L+S SS ++IH ++++ D F+ +L++ C + LL F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 105 EMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKARE 164
++ N + +N L+ FS + ++ M + + +TF +I A + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKS-RIWPDNITFPFLIKASSEMECVL 134
Query: 165 EGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA-VC 223
G+ H V+ G + V V N+L++MY GF+ +A ++F M +++VSW SMVA C
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 224 ----TQNGRP--------------------------NEAINYFSMMRLNGLFPDEATMVS 253
+N R +AI+ F M+ G+ +E MVS
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 254 LLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPD 313
++ +C L E + + + N+ + T L++++ + G + + VF + + D
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 314 KVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQ 373
++ ++++ G A+HG +A+ +F + I G P VTFT +LSACSH GLV++G ++
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 374 VMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNI 433
M +G++PRL+HY C+VD+LGR G L +A+ I M +PN+ + GALLGA ++Y N
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 434 SIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEH 493
+ + LI + P Y++LSNIY+ +G W +R +MK K++ + PG S IE
Sbjct: 435 EVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEI 494
Query: 494 GNKIHRFVV-DDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKH 552
KI++F + DD HP+ KI +K EE++ KI+ G+ T DV EE K + ++ H
Sbjct: 495 DGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMH 554
Query: 553 SEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDG 612
SEK+A+AYG++ + + I+KNLR+C DCH K +S + R +I+RD RFHHF +G
Sbjct: 555 SEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNG 614
Query: 613 LCSCGDYW 620
+CSC DYW
Sbjct: 615 VCSCRDYW 622
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/591 (31%), Positives = 321/591 (54%), Gaps = 17/591 (2%)
Query: 42 YPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGF-----IGDQLVSCYLNMGAT 96
YP + ST L A ++L IH +K GF +G+ LV Y G
Sbjct: 104 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKI-----GFEMMVEVGNSLVDMYSKCGRI 158
Query: 97 PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK-SDLDLELNELTFISVIS 155
+A+ +F + ++ +SWN++++GF G + F +M+ +++ +E T S++
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 156 ACALAKAREEGQYVHCCAVKLGMEL--QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM 213
AC+ G+ +H V+ G + +L+++Y K G++ SA K F + E+ M
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Query: 214 VSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGV 273
+SW+S++ Q G EA+ F ++ D + S++ L R + + +
Sbjct: 279 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 338
Query: 274 IFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEA 333
+++ +++++Y K G ++ + K FAE+ D ++ T +++GY HG G ++
Sbjct: 339 AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 398
Query: 334 IQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVD 393
++ F +R +EPD V + +LSACSHSG++ EG+ F + + +G++PR++HY+C+VD
Sbjct: 399 VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 458
Query: 394 LLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRN 453
LLGR G L +AK LI MP +PN G+W LL RV+ +I +GKE + L+ +D +P N
Sbjct: 459 LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPAN 518
Query: 454 YIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKI 513
Y+M+SN+Y +G W++ R L K L + G S++E ++H F + SHP + I
Sbjct: 519 YVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVI 578
Query: 514 HKKLEEVMSKI-QEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMP-- 570
+ L+E ++ +E G+V + LHD+ +E K + HSEK+A+ L +
Sbjct: 579 QETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGK 638
Query: 571 -LVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+ + KNLR+C DCH+ K +S I K ++RDA RFH F DG CSCGDYW
Sbjct: 639 TIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 195/375 (52%), Gaps = 7/375 (1%)
Query: 44 RDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLF 103
R LVS L V + S +V H ++KS + + L+ Y A +F
Sbjct: 6 RQNLVSILRVCTRKGLSDQGGQV-HCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 104 DEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAR 163
D MP ++ VSW++L+SG GDL +S+FS M + NE TF + + AC L A
Sbjct: 65 DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ-GIYPNEFTFSTNLKACGLLNAL 123
Query: 164 EEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVC 223
E+G +H +K+G E+ V+V N+L++MY K G ++ A K+F + +++++SWN+M+A
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Query: 224 TQNGRPNEAINYFSMMRLNGL--FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL-- 279
G ++A++ F MM+ + PDE T+ SLL+AC + + + +HG + G
Sbjct: 184 VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFER 339
+ TI +L++LY K G L ++ K F +I + ++ ++++ GYA G EA+ F+R
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
+ D + ++ + L+ +GK Q ++ + +VD+ +CG
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQ-MQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 400 LLNDAKELIKNMPFE 414
L+++A++ M +
Sbjct: 363 LVDEAEKCFAEMQLK 377
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 144/282 (51%), Gaps = 10/282 (3%)
Query: 149 TFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM 208
+S++ C ++G VHC +K G L + N LI+MY K A+K+F +M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 209 TEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVE 268
E+N+VSW+++++ NG +++ FS M G++P+E T + L+AC L+
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 269 AVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHG 328
+HG G + + + +L+++YSK GR+N + KVF I ++ AM++G+ G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 329 CGTEAIQFF----ERTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQ 382
G++A+ F E I+E PD T T LL ACS +G++ GK H F V S +
Sbjct: 188 YGSKALDTFGMMQEANIKE--RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH-CP 244
Query: 383 PRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+VDL +CG L A++ + E W +L+
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLI 285
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/605 (31%), Positives = 320/605 (52%), Gaps = 44/605 (7%)
Query: 55 LKSSSSLYCCRVIHARVIKSLDYRDGFI-GDQLVSCYLNMGATPD------AQLLFDEMP 107
L S + R IHA++ Y DG + D LV ++ A D A + D
Sbjct: 13 LDSGITFKEVRQIHAKL-----YVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSE 67
Query: 108 NKDFVSWNSLVSGFSKRGDLGNCMSVFS-VMKSDLDLELNELTFISVISACALAKAREEG 166
+ NS++ K + ++ S DL+ + T ++ AC + RE G
Sbjct: 68 KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETG 127
Query: 167 QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS-------------------------- 200
VH ++ G + V LI++Y + G +DS
Sbjct: 128 LQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 201 -----AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
A KLF M E++ ++WN+M++ Q G EA+N F +M+L G+ + M+S+L
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 256 QACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKV 315
AC L H I + + + TTL++LY+K G + + +VF + + +
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 316 ACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVM 375
++ L+G AM+G G + ++ F ++G+ P+ VTF +L CS G VDEG+ +F M
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 376 SDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISI 435
+ +G++P+L+HY C+VDL R G L DA +I+ MP +P++ VW +LL ASR+Y N+ +
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLEL 427
Query: 436 GKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGN 495
G A++ ++ L+ ++ Y++LSNIY+ S W + + VR MK+K + + PGCS +E
Sbjct: 428 GVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNG 487
Query: 496 KIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEK 555
++H F V D SHP +I +++ +++ G+ ++T ++ D+ EE K + + HSEK
Sbjct: 488 EVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEK 547
Query: 556 IALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCS 615
A+A+G++ D+P+ I+KNLR+C DCH+ + +S I R II+RD RFHHF DG CS
Sbjct: 548 AAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCS 607
Query: 616 CGDYW 620
C +W
Sbjct: 608 CNGFW 612
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 168/316 (53%), Gaps = 17/316 (5%)
Query: 22 LPTCCTLLS--ETSVRFHSIST---YPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLD 76
L CT L ET ++ H ++ + DP V T L++L + L C H +V S+
Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISL--YAELGCLDSCH-KVFNSIP 170
Query: 77 YRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSV 136
D +V+ G A+ LF+ MP +D ++WN+++SG+++ G+ ++VF +
Sbjct: 171 CPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHL 230
Query: 137 MKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFG 196
M+ + +++N + ISV+SAC A ++G++ H + +++ V++ TL+++Y K G
Sbjct: 231 MQLE-GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCG 289
Query: 197 FVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
++ A ++FW M E+N+ +W+S + NG + + FS+M+ +G+ P+ T VS+L+
Sbjct: 290 DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR 349
Query: 257 ACETLHL----RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-K 311
C + +R +++ G++ + L++LY++ GRL + + ++ K
Sbjct: 350 GCSVVGFVDEGQRHFDSMRNEF---GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMK 406
Query: 312 PDKVACTAMLSGYAMH 327
P +++L M+
Sbjct: 407 PHAAVWSSLLHASRMY 422
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 274/442 (61%), Gaps = 7/442 (1%)
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRL---N 242
N+++N Y K G +D A KLF M E+N++SW+ ++ G+ EA++ F M+L N
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 243 GLF--PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
F P+E TM ++L AC L + VH I ++ +I + T L+++Y+K G L
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 301 ASCKVFAEI-SKPDKVACTAMLSGYAMHGCGTEAIQFF-ERTIREGMEPDHVTFTHLLSA 358
+ +VF + SK D A +AM+ AM+G E Q F E T + + P+ VTF +L A
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 359 CSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSG 418
C H GL++EGK YF++M + +G+ P + HY CMVDL GR GL+ +A+ I +MP EP+
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 419 VWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMK 478
+WG+LL SR+ +I + A + LI LDP + Y++LSN+Y+ +G W + +R M+
Sbjct: 372 IWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEME 431
Query: 479 TKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILH 538
K + + PGCS++E +H FVV D S +S++I+ L+E+M +++E G+V++T+ +L
Sbjct: 432 VKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLL 491
Query: 539 DVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTI 598
D+ E+ K ++ HSEK+A+A+ L+ + P+ IIKNLRIC DCH K +S + R I
Sbjct: 492 DLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREI 551
Query: 599 IIRDAKRFHHFSDGLCSCGDYW 620
++RD RFHHF DG CSC D+W
Sbjct: 552 VVRDCNRFHHFRDGSCSCRDFW 573
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 149/296 (50%), Gaps = 17/296 (5%)
Query: 44 RDPLVSTLLVALKSSSSLYCCRVIHA-RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
+DP V T L+ + SS C + A RV +D + +V+ Y G DA+ L
Sbjct: 95 KDPFVRTSLLNMYSS----CGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKL 150
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK----SDLDLELNELTFISVISACA 158
FDEMP ++ +SW+ L++G+ G + +F M+ ++ + NE T +V+SAC
Sbjct: 151 FDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACG 210
Query: 159 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM-TEQNMVSWN 217
A E+G++VH K +E+ + + LI+MY K G ++ A ++F A+ +++++ +++
Sbjct: 211 RLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYS 270
Query: 218 SMVAVCTQNGRPNEAINYFSMMRL-NGLFPDEATMVSLLQACETLHLRRLVEA---VHGV 273
+M+ G +E FS M + + P+ T V +L AC +H + E +
Sbjct: 271 AMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC--VHRGLINEGKSYFKMM 328
Query: 274 IFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHG 328
I G+ +I +++LY + G + + A + +PD + ++LSG M G
Sbjct: 329 IEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 42/249 (16%)
Query: 216 WNSMVAVCTQN---GRPNEAINYFSMMRLNGLFPDEATMVSLLQACET-LHLRRLVEAVH 271
WN ++ N + + I+ + MR + + PD T LL + LHL L + H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLP-LGQRTH 85
Query: 272 GVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGT 331
I GLD++ + T+LLN+YS G L ++ +VF + D A ++++ YA G
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 332 EAIQFF----ERTI----------------REGME----------------PDHVTFTHL 355
+A + F ER + +E ++ P+ T + +
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 356 LSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEP 415
LSAC G +++GK + D Y V+ + + ++D+ +CG L AK + + +
Sbjct: 206 LSACGRLGALEQGK-WVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 416 NSGVWGALL 424
+ + A++
Sbjct: 265 DVKAYSAMI 273
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 211/584 (36%), Positives = 314/584 (53%), Gaps = 48/584 (8%)
Query: 81 FIGDQLVSCYLNMGATPDAQLLFDEMP--NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK 138
++ + L Y + G AQ LFDE+P KD V W +L+S FS+ G L N M +F M+
Sbjct: 44 YLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR 103
Query: 139 SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFV 198
+E+++++ + + CA + Q H AVK+G+ VKV N L++MYGK G V
Sbjct: 104 RK-RVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLV 162
Query: 199 DSAFKLF----------WA---------------------MTEQNMVSWNSMVAVCTQNG 227
++F W M E+N V+W MVA G
Sbjct: 163 SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Query: 228 RPNEAINYFSMMRLN-GLFPDEATMVSLLQACE---TLHLRRLVEAVHGVIFTCGLDE-- 281
E + + M G + T+ S+L AC L + R V V+ + + E
Sbjct: 223 FTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVH-VYALKKEMMMGEEA 281
Query: 282 ---NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
++ + T L+++Y+K G +++S VF + K + V A+ SG AMHG G I F
Sbjct: 282 SYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFP 341
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC 398
+ IRE ++PD +TFT +LSACSHSG+VDEG F + YG++P++DHY+CMVDLLGR
Sbjct: 342 QMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRA 399
Query: 399 GLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLS 458
GL+ +A+ L++ MP PN V G+LLG+ V+ + I + LI + P + I++S
Sbjct: 400 GLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMS 459
Query: 459 NIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLE 518
N+Y A G A +R ++ + + + PG S I + +HRF D SHP + +I+ KL
Sbjct: 460 NMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLN 519
Query: 519 EVMSKIQEFGFVSETESIL-HDVAE-EIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKN 576
EV+ +I+ G+V + ++ H + E K + HSEK+A+ +GLL + PL++ KN
Sbjct: 520 EVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKN 579
Query: 577 LRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
LRICRDCH K VS + R IIIRD RFH F G CSC DYW
Sbjct: 580 LRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 10/187 (5%)
Query: 50 TLLVALKSSSSLYCCRVIHARVIK-------SLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
++L A S +L R +H +K Y D +G LV Y G + +
Sbjct: 249 SMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F M ++ V+WN+L SG + G + +F M +++ ++LTF +V+SAC+ +
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR--EVKPDDLTFTAVLSACSHSGI 366
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM-TEQNMVSWNSMVA 221
+EG G+E +V ++++ G+ G ++ A L M N V S++
Sbjct: 367 VDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLG 426
Query: 222 VCTQNGR 228
C+ +G+
Sbjct: 427 SCSVHGK 433
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 306/582 (52%), Gaps = 40/582 (6%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P +S+LL A+ L + IH ++++ + D ++ L+ Y+ G P A+++
Sbjct: 223 PSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMV 282
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD M K+ V+WNSLVSG S AC L A
Sbjct: 283 FDMMDAKNIVAWNSLVSGLS--------------------------------YACLLKDA 310
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNS 218
+ + K G++ N+L + Y G + A + M E+ N+VSW +
Sbjct: 311 ----EALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 219 MVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCG 278
+ + C++NG A+ F M+ G+ P+ ATM +LL+ L L + VHG
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 279 LDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
L + + T L+++Y K G L ++ ++F I + ML GYAM G G E I F
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC 398
+ GMEPD +TFT +LS C +SGLV EG YF +M YG+ P ++H SCMVDLLGR
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRS 546
Query: 399 GLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLS 458
G L++A + I+ M +P++ +WGA L + +++ ++ + + A + L L+P + NY+M+
Sbjct: 547 GYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMI 606
Query: 459 NIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLE 518
N+YS W D ++R LM+ + S+I+ +H F + +HPD I+ +L
Sbjct: 607 NLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELY 666
Query: 519 EVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLR 578
+++S++++ G+V +T I D+++ K ++ H+EK+A+ YGL+ P+ ++KN
Sbjct: 667 KLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTN 726
Query: 579 ICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
IC D H AK++S++ R I++++ R HHF DG CSC D W
Sbjct: 727 ICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 182/414 (43%), Gaps = 75/414 (18%)
Query: 66 VIHARVIK-SLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
IH +IK LD D + + Y + A LFDEMP +D ++WN +V +
Sbjct: 8 TIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRS 67
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G+ + +F M+ + + T + ++ C+ + EG+ +H ++LG+E V +
Sbjct: 68 GNWEKAVELFREMQFS-GAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSM 126
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
N+LI MY + G ++ + K+F +M ++N+ SWNS+++ T+ G ++AI M + GL
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 245 FPD-----------------------------------EATMVSLLQA-CETLHLRRLVE 268
PD +++ SLLQA E HL +L +
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL-KLGK 245
Query: 269 AVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF---------------------- 306
A+HG I L ++ + TTL+++Y K G L + VF
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 307 -------------AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFT 353
E KPD + ++ SGYA G +A+ + +G+ P+ V++T
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 354 HLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL 407
+ S CS +G F M + GV P S ++ +LG LL+ KE+
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQE-EGVGPNAATMSTLLKILGCLSLLHSGKEV 418
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/554 (33%), Positives = 312/554 (56%), Gaps = 2/554 (0%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+H V+KS + + L++ Y D++ F++ P K +W+S++S F++
Sbjct: 37 LHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNEL 96
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ M + +L ++ S +CA+ + G+ VHC ++K G + V V +
Sbjct: 97 PWMSLEFLKKMMAG-NLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGS 155
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
+L++MY K G + A K+F M ++N+V+W+ M+ Q G EA+ F L
Sbjct: 156 SLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV 215
Query: 247 DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF 306
++ + S++ C L L +HG+ D + + ++L++LYSK G + +VF
Sbjct: 216 NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275
Query: 307 AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
E+ + AML YA H + I+ F+R GM+P+ +TF ++L+ACSH+GLVD
Sbjct: 276 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335
Query: 367 EGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
EG++YF M + ++P HY+ +VD+LGR G L +A E+I NMP +P VWGALL +
Sbjct: 336 EGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 394
Query: 427 SRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNP 486
V+ N + AA+ + L P +I LSN Y+A G + DAAK R L++ + +
Sbjct: 395 CTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKET 454
Query: 487 GCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKT 546
G S++E NK+H F + H S +I++KL E+ ++++ G++++T +L +V + K
Sbjct: 455 GLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKN 514
Query: 547 NMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRF 606
+ HSE++A+A+GL+ AD P+ ++KNLR+C DCH KF+S+ +R II+RD RF
Sbjct: 515 QTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRF 574
Query: 607 HHFSDGLCSCGDYW 620
H F DG CSC DYW
Sbjct: 575 HRFEDGKCSCNDYW 588
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 141/286 (49%), Gaps = 5/286 (1%)
Query: 46 PLVSTLLVALKSSSSLYCC---RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P L A KS + L C R +H +K+ D F+G LV Y G A+ +
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKM 173
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FDEMP ++ V+W+ ++ G+++ G+ + +F + +L +N+ +F SVIS CA +
Sbjct: 174 FDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE-NLAVNDYSFSSVISVCANSTL 232
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
E G+ +H ++K + V ++L+++Y K G + A+++F + +N+ WN+M+
Sbjct: 233 LELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKA 292
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
Q+ + I F M+L+G+ P+ T +++L AC L + ++
Sbjct: 293 YAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPT 352
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMH 327
+L+++ + GRL + +V + P + A+L+ +H
Sbjct: 353 DKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 135/271 (49%), Gaps = 2/271 (0%)
Query: 156 ACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVS 215
+ A ++ +G +H VK G+ L V N LIN Y K + + F +++ +
Sbjct: 24 SSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTT 83
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
W+S+++ QN P ++ + M L PD+ + S ++C L + +VH +
Sbjct: 84 WSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSM 143
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
G D ++ + ++L+++Y+K G + + K+F E+ + + V + M+ GYA G EA+
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALW 203
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
F+ + E + + +F+ ++S C++S L++ G+ +S S +V L
Sbjct: 204 LFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIKSSFDSSSFVGSSLVSLY 262
Query: 396 GRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
+CG+ A ++ +P + N G+W A+L A
Sbjct: 263 SKCGVPEGAYQVFNEVPVK-NLGIWNAMLKA 292
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 177/437 (40%), Positives = 263/437 (60%), Gaps = 4/437 (0%)
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYF-SMMRLNG 243
+N +I K G A K+ ++QN+++WN M+ +N + EA+ +M+
Sbjct: 101 INLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 244 LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
+ P++ + S L AC L + VH ++ G++ N + + L+++Y+K G + S
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
+VF + + D AM++G+A HG TEAI+ F E + PD +TF LL+ CSH G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGAL 423
L++EGK YF +MS + +QP+L+HY MVDLLGR G + +A ELI++MP EP+ +W +L
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 424 LGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLA 483
L +SR Y N +G+ A +NL D Y++LSNIYS++ W A KVR LM + +
Sbjct: 341 LSSSRTYKNPELGEIAIQNLSKAKSGD---YVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 484 RNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEE 543
+ G S++E G IHRF D SH ++ I+K LE ++ K + GFVS+T+ +L DV+EE
Sbjct: 398 KAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEE 457
Query: 544 IKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDA 603
K +N HSEK+ALAY +L S+ + I KN+R+C DCH K VS + R II+RD
Sbjct: 458 EKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDR 517
Query: 604 KRFHHFSDGLCSCGDYW 620
RFH F DGLCSC DYW
Sbjct: 518 IRFHRFEDGLCSCRDYW 534
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 129/278 (46%), Gaps = 9/278 (3%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
++ + +G + A+ + +++ ++WN ++ G+ + + M S D++
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF 205
N+ +F S ++ACA ++VH + G+EL + + L+++Y K G + ++ ++F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRR 265
+++ ++ WN+M+ +G EAI FS M + PD T + LL C L
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 266 LVEAVHGVIF-TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSG 323
+ G++ + + +++L + GR+ + ++ + +PD V ++LS
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 324 ---YAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA 358
Y G AIQ + + D+V +++ S+
Sbjct: 344 SRTYKNPELGEIAIQ----NLSKAKSGDYVLLSNIYSS 377
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 341 bits (875), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 204/592 (34%), Positives = 324/592 (54%), Gaps = 13/592 (2%)
Query: 38 SISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATP 97
SIS+ D + +L+V SS+ R IHA ++++ R+ + +S L + P
Sbjct: 4 SISSSSGDDHLLSLIV---SSTGKLHLRQIHALLLRTSLIRNSDVFHHFLS-RLALSLIP 59
Query: 98 D----AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
+ +F + N N+++ FS +F ++ + L N L+
Sbjct: 60 RDINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFA 119
Query: 154 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM 213
+ C + G +H G ++ TL+++Y A K+F + +++
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 214 VSWNSMVAVCTQNGRPNEAINYFSMMR--LNG-LFPDEATMVSLLQACETLHLRRLVEAV 270
VSWN + + +N R + + F M+ ++G + PD T + LQAC L + V
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 271 HGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCG 330
H I GL + + TL+++YS+ G ++ + +VF + + + V+ TA++SG AM+G G
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Query: 331 TEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVM-SDVYGVQPRLDHYS 389
EAI+ F ++ G+ P+ T T LLSACSHSGLV EG +F M S + ++P L HY
Sbjct: 300 KEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYG 359
Query: 390 CMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPS 449
C+VDLLGR LL+ A LIK+M +P+S +W LLGA RV+ ++ +G+ +LI L
Sbjct: 360 CVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAE 419
Query: 450 DPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPD 509
+ +Y++L N YS G W ++R+LMK K + PGCS IE +H F+VDD SHP
Sbjct: 420 EAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPR 479
Query: 510 SDKIHKKLEEVMSKIQEFGFVSETESILHDV-AEEIKTNMVNKHSEKIALAYGLLVSAAD 568
++I+K L E+ +++ G+V+E S LH++ +EE K + HSEK+A+A+G+LV+
Sbjct: 480 KEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPG 539
Query: 569 MPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+ + KNLR C DCH AKFVS + R +I+RD RFHHF G CSC D+W
Sbjct: 540 TTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 196/578 (33%), Positives = 304/578 (52%), Gaps = 47/578 (8%)
Query: 50 TLLVALKSSSSL---YCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
T LKS+S L + R +HA +K+ D F+ LV Y G A +F+E
Sbjct: 128 TFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEES 187
Query: 107 PNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
P++ + WN L++G+ + D+ ++F M
Sbjct: 188 PDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPE----------------------- 224
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
R G + +TLI Y G ++ A +LF M E+N+VSW +++
Sbjct: 225 RNSGSW-----------------STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLING 267
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
+Q G AI+ + M GL P+E T+ ++L AC +HG I G+ +
Sbjct: 268 FSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLD 327
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
I T L+++Y+K G L+ + VF+ ++ D ++ TAM+ G+A+HG +AIQ F + +
Sbjct: 328 RAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMY 387
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLN 402
G +PD V F +L+AC +S VD G ++F M Y ++P L HY +VDLLGR G LN
Sbjct: 388 SGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLN 447
Query: 403 DAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYS 462
+A EL++NMP P+ W AL A + + + ++NL+ LDP +YI L ++
Sbjct: 448 EAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHA 507
Query: 463 ASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMS 522
+ G D K R ++ ++ R+ G S+IE ++++F DYSH + +I KL+E++S
Sbjct: 508 SKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIIS 567
Query: 523 KIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRD 582
+ G+ + +HD+ EE K N+ HSEK+AL G L +A + IIKNLRIC D
Sbjct: 568 LAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGD 627
Query: 583 CHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
CH K+VS I +R I++RDA++FHHF DG CSCGDYW
Sbjct: 628 CHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 335 bits (858), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 312/576 (54%), Gaps = 16/576 (2%)
Query: 55 LKSSSSLYCCRVIHARVI-KSLDYRDGFIGDQLVSCYLNM-GATPDAQLLFDEMPNKDFV 112
L+ +S+ R IH+ VI L + L C +++ G+ AQLLFD +
Sbjct: 12 LQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPST 71
Query: 113 S-WNSLVSGFSKRGD------LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
S WN L+ GFS N M + SV + DL TF + +C K+ +
Sbjct: 72 SDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDL------FTFNFALKSCERIKSIPK 125
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQ 225
+H ++ G V +L+ Y G V+ A K+F M +++VSWN M+ +
Sbjct: 126 CLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSH 185
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
G N+A++ + M G+ D T+V+LL +C + + +H + + + +
Sbjct: 186 VGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFV 245
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
L+++Y+K G L + VF + K D + +M+ GY +HG G EAI FF + + G+
Sbjct: 246 SNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV 305
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
P+ +TF LL CSH GLV EG +F++MS + + P + HY CMVDL GR G L ++
Sbjct: 306 RPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSL 365
Query: 406 ELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASG 465
E+I + +W LLG+ +++ N+ +G+ A + L+ L+ + +Y+++++IYSA+
Sbjct: 366 EMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAAN 425
Query: 466 LWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQ 525
A +R L+++ L PG S+IE G+++H+FVVDD HP+S I+ +L EV+++
Sbjct: 426 DAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAI 485
Query: 526 EFGFVSE-TESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCH 584
G+ E + +++ + HSEK+A+AYGL+ + A L I KNLR+CRDCH
Sbjct: 486 LAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCH 545
Query: 585 KTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
K+VS R II+RD RFHHF+DG+CSC DYW
Sbjct: 546 SFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 332 bits (850), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 321/577 (55%), Gaps = 11/577 (1%)
Query: 50 TLLVALKSSSSLYCCRV---IHARVIKS-LDYRDGFIGDQLVSCYLNMGATPDAQLLFDE 105
+ + AL + S +Y ++ IH ++S ++ D + ++ Y G A+ +F+
Sbjct: 233 STMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNG 292
Query: 106 MPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
M ++ V+WN ++ +++ G + + F M L+ + +T I+++ A A+ E
Sbjct: 293 MIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----E 348
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQ 225
G+ +H A++ G + + LI+MYG+ G + SA +F M E+N++SWNS++A Q
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENIT 284
NG+ A+ F + + L PD T+ S+L A E+L L E +H I N
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE-IHAYIVKSRYWSNTI 467
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
I+ +L+++Y+ G L + K F I D V+ +++ YA+HG G ++ F I
Sbjct: 468 ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASR 527
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
+ P+ TF LL+ACS SG+VDEG YF+ M YG+ P ++HY CM+DL+GR G + A
Sbjct: 528 VNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAA 587
Query: 405 KELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSAS 464
K ++ MPF P + +WG+LL ASR + +I+I + AAE + ++ + Y++L N+Y+ +
Sbjct: 588 KRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEA 647
Query: 465 GLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKI 524
G W D +++ LM++K ++R S +E K H F D SH ++KI++ L+ V +
Sbjct: 648 GRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMV 707
Query: 525 -QEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDC 583
+E +V + + + ++N +HS ++A +GL+ + + + N RICR C
Sbjct: 708 GEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKC 767
Query: 584 HKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
H+ + S + +R I++ D+K FHHFS+G CSCG+YW
Sbjct: 768 HEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 195/370 (52%), Gaps = 18/370 (4%)
Query: 41 TYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQ 100
TYP ++ ++ SSL + IHA VIK D ++ + L+S Y+ +G DA+
Sbjct: 132 TYP------FVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
+F+EMP +D VSWNS++SG+ GD + + +F M + + + +S + AC+
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK-CGFKPDRFSTMSALGACSHV 244
Query: 161 KAREEGQYVHCCAVKLGMEL-QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSM 219
+ + G+ +HC AV+ +E V V+ ++++MY K+G V A ++F M ++N+V+WN M
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 220 VAVCTQNGRPNEAINYFSMM-RLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCG 278
+ +NGR +A F M NGL PD T ++LL A L R +HG G
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGR----TIHGYAMRRG 360
Query: 279 LDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
++ + T L+++Y + G+L ++ +F +++ + ++ ++++ Y +G A++ F+
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQ 420
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLG 396
+ PD T +L A + S + EG+ H + V S + L+ +V +
Sbjct: 421 ELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILN---SLVHMYA 477
Query: 397 RCGLLNDAKE 406
CG L DA++
Sbjct: 478 MCGDLEDARK 487
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 172/333 (51%), Gaps = 13/333 (3%)
Query: 98 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 157
DA LFDEM D WN ++ GF+ G + +S M ++ + T+ VI +
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVF-AGVKADTFTYPFVIKSV 140
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWN 217
A + EEG+ +H +KLG V V N+LI++Y K G A K+F M E+++VSWN
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200
Query: 218 SMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC 277
SM++ G ++ F M G PD + +S L AC ++ ++ + +H
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 278 GLDE-NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQF 336
++ ++ ++T++L++YSK G ++ + ++F + + + VA M+ YA +G T+A
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320
Query: 337 FER-TIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVD 393
F++ + + G++PD +T +LL A + + EG+ H + + G P + + ++D
Sbjct: 321 FQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR---GFLPHMVLETALID 373
Query: 394 LLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
+ G CG L A+ + M E N W +++ A
Sbjct: 374 MYGECGQLKSAEVIFDRMA-EKNVISWNSIIAA 405
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 16/240 (6%)
Query: 196 GFVDS-----AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
GF DS A +LF M + + WN M+ T G EA+ ++S M G+ D T
Sbjct: 73 GFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFT 132
Query: 251 MVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
++++ + + +H ++ G ++ + +L++LY K+G + KVF E+
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 311 KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKH 370
+ D V+ +M+SGY G G ++ F+ ++ G +PD + L ACSH GK
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 371 YFQVMSDVYGVQPRLDHYSCMV-----DLLGRCGLLNDAKELIKNMPFEPNSGVWGALLG 425
+ V+ R++ MV D+ + G ++ A+ + M + N W ++G
Sbjct: 253 I-----HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIG 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
Query: 40 STYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDA 99
S P ++++L A S SL R IHA ++KS + + I + LV Y G DA
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Query: 100 QLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACAL 159
+ F+ + KD VSWNS++ ++ G + +FS M + + N+ TF S+++AC++
Sbjct: 486 RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS-RVNPNKSTFASLLAACSI 544
Query: 160 AKAREEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM 208
+ +EG +Y + G++ ++ ++++ G+ G +A + M
Sbjct: 545 SGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 298/545 (54%), Gaps = 40/545 (7%)
Query: 50 TLLVALKSSSSLYCCRV---IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
T L + +S+ CRV +H ++KS + ++ L+ Y A+ L + M
Sbjct: 229 TFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM 288
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE- 165
D VSWNS++ G ++G +G +S+F M + D+++++ T S+++ AL++ +
Sbjct: 289 EVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH-ERDMKIDDFTIPSILNCFALSRTEMKI 347
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQ 225
HC VK G V N L++MY K G +DSA K+F M E++++SW ++V T
Sbjct: 348 ASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTH 407
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
NG +EA+ F MR+ G+ PD+ S+L A L L + VHG G ++++
Sbjct: 408 NGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSV 467
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
+L+ +Y+K G L + +F + D + T ++ GYA
Sbjct: 468 NNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA-------------------- 507
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
+GL+++ + YF M VYG+ P +HY+CM+DL GR G +
Sbjct: 508 ---------------KNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVE 552
Query: 406 ELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASG 465
+L+ M EP++ VW A+L ASR + NI G+ AA+ L+ L+P++ Y+ LSN+YSA+G
Sbjct: 553 QLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAG 612
Query: 466 LWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQ 525
+AA VR LMK++ +++ PGCS++E K+H F+ +D HP +I+ K++E+M I+
Sbjct: 613 RQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIK 672
Query: 526 EFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHK 585
E G+ ++ LHD+ +E K + HSEK+A+A+GLLV + P+ IIKNLR+C DCH
Sbjct: 673 EAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHS 732
Query: 586 TAKFV 590
K +
Sbjct: 733 AMKLL 737
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 178/350 (50%), Gaps = 10/350 (2%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPN-KDFVSWNSLVSGFSKRG 125
IH IK+ D + + L++ Y +A+ LF+ M K+ V+W S+++G+S+ G
Sbjct: 147 IHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNG 206
Query: 126 DLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVV 185
+ F ++ + + + N+ TF SV++ACA A G VHCC VK G + + V
Sbjct: 207 FAFKAIECFRDLRREGN-QSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ 265
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
+ LI+MY K ++SA L M ++VSWNSM+ C + G EA++ F M +
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 246 PDEATMVSLLQACETLHLR--RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
D+ T+ S+L C L ++ + H +I G + L+++Y+K G ++++
Sbjct: 326 IDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSAL 384
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
KVF + + D ++ TA+++G +G EA++ F G+ PD + +LSA +
Sbjct: 385 KVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELT 444
Query: 364 LVDEGKHYFQVMSDVY--GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
L++ G+ QV + G L + +V + +CG L DA + +M
Sbjct: 445 LLEFGQ---QVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSM 491
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 184/385 (47%), Gaps = 12/385 (3%)
Query: 44 RDPLVSTLLVALKSSSSLYCCRVIHAR-VIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
R L S LL+ S S RV AR + + RD F + ++ Y N DA+ L
Sbjct: 26 RTKLHSNLLLGDLSKSG----RVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKL 81
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F P K+ +SWN+L+SG+ K G ++F M+SD ++ NE T SV+ C
Sbjct: 82 FRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD-GIKPNEYTLGSVLRMCTSLVL 140
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSMVA 221
G+ +H +K G +L V VVN L+ MY + + A LF M E+N V+W SM+
Sbjct: 141 LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
+QNG +AI F +R G ++ T S+L AC ++ R+ VH I G
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
NI + + L+++Y+K + ++ + + D V+ +M+ G G EA+ F R
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 342 REGMEPDHVTFTHLLS--ACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
M+ D T +L+ A S + + + ++ Y +++ +VD+ + G
Sbjct: 321 ERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN--ALVDMYAKRG 378
Query: 400 LLNDAKELIKNMPFEPNSGVWGALL 424
+++ A ++ + M E + W AL+
Sbjct: 379 IMDSALKVFEGM-IEKDVISWTALV 402
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 328 bits (840), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/537 (34%), Positives = 296/537 (55%), Gaps = 21/537 (3%)
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL---ELNELTFISVISACA 158
+FD + N WN+L+ + D+ F + + L+ ++ TF V+ ACA
Sbjct: 105 VFDSIENHSSFMWNTLIRACAH--DVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACA 162
Query: 159 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNS 218
EG+ VHC VK G V V N LI++YG G +D A K+F M E+++VSWNS
Sbjct: 163 YIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNS 222
Query: 219 MVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF-TC 277
M+ + G + A+ F M+ PD TM S+L AC L L H + C
Sbjct: 223 MIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC 281
Query: 278 GLD--ENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
+D ++ + +L+ +Y K G L + +VF + K D + AM+ G+A HG EA+
Sbjct: 282 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMN 341
Query: 336 FFERTI--REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVD 393
FF+R + RE + P+ VTF LL AC+H G V++G+ YF +M Y ++P L+HY C+VD
Sbjct: 342 FFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVD 401
Query: 394 LLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA-SRVYHNISIGKEAAENLIALDPSDPR 452
L+ R G + +A +++ +MP +P++ +W +LL A + ++ + +E A N+I +
Sbjct: 402 LIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNES 461
Query: 453 N-------YIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDY 505
+ Y++LS +Y+++ W+D VR LM + + PGCS IE H F D
Sbjct: 462 SNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDT 521
Query: 506 SHPDSDKIHKKLEEVMSKIQEFGFVSE-TESILHDVAEE-IKTNMVNKHSEKIALAYGLL 563
SHP + +I+++L+ + +++ G++ + +++ L D + K + HSE++A+A+GL+
Sbjct: 522 SHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLI 581
Query: 564 VSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
P+ I KNLR+C DCH+ K +S + II+RD RFHHF DG CSC DYW
Sbjct: 582 NLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 11/201 (5%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
+ +H +++K D ++ + L+ Y + G A+ +FDEMP + VSWNS++ +
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHC-----CAVKLGME 179
G+ + + +F M+ E + T SV+SACA + G + H C V + M+
Sbjct: 231 GEYDSALQLFREMQR--SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 180 LQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMM 239
+ VK N+LI MY K G + A ++F M ++++ SWN+M+ +GR EA+N+F M
Sbjct: 289 VLVK--NSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 240 --RLNGLFPDEATMVSLLQAC 258
+ + P+ T V LL AC
Sbjct: 347 VDKRENVRPNSVTFVGLLIAC 367
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 6/241 (2%)
Query: 188 LINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN-GRPNEAIN-YFSMMRLNGLF 245
++ + F V+ AF++F ++ + WN+++ C + R EA Y M+
Sbjct: 89 ILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS 148
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
PD+ T +L+AC + + VH I G ++ + L++LY G L+ + KV
Sbjct: 149 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKV 208
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
F E+ + V+ +M+ G A+Q F R ++ EPD T +LSAC+ G +
Sbjct: 209 FDEMPERSLVSWNSMIDALVRFGEYDSALQLF-REMQRSFEPDGYTMQSVLSACAGLGSL 267
Query: 366 DEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGAL 423
G H F + V + + ++++ +CG L A+++ + M + + W A+
Sbjct: 268 SLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAM 326
Query: 424 L 424
+
Sbjct: 327 I 327
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 328 bits (840), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 193/630 (30%), Positives = 316/630 (50%), Gaps = 60/630 (9%)
Query: 11 TLTLSPRILHCLPTCCTLLSETSVRFHSISTYPRDPLV------------------STLL 52
L + R+L C P + T VR +S S P + + + ++
Sbjct: 54 ALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVI 113
Query: 53 VALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFV 112
A+++ SL +H + +K F+G L+ Y G A+ +FDEM + V
Sbjct: 114 KAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLV 173
Query: 113 SWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCC 172
+WN++++ + D+ +F M L N ++
Sbjct: 174 AWNAVITACFRGNDVAGAREIFDKM-----LVRNHTSW---------------------- 206
Query: 173 AVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEA 232
N ++ Y K G ++SA ++F M ++ VSW++M+ NG NE+
Sbjct: 207 -------------NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNES 253
Query: 233 INYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNL 292
YF ++ G+ P+E ++ +L AC + +HG + G +++ L+++
Sbjct: 254 FLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDM 313
Query: 293 YSKIGRLNASCKVFAEISKPD-KVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVT 351
YS+ G + + VF + + V+ T+M++G AMHG G EA++ F G+ PD ++
Sbjct: 314 YSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGIS 373
Query: 352 FTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
F LL ACSH+GL++EG+ YF M VY ++P ++HY CMVDL GR G L A + I M
Sbjct: 374 FISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQM 433
Query: 412 PFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAA 471
P P + VW LLGA + NI + ++ + L LDP++ + ++LSN Y+ +G W D A
Sbjct: 434 PIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVA 493
Query: 472 KVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQ-EFGFV 530
+R M + + + S +E G +++F + + H+KL+E++ +++ E G+
Sbjct: 494 SIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYT 553
Query: 531 SETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFV 590
E S L+DV EE K + V+KHSEK+ALA+ L + + I+KNLRICRDCH K
Sbjct: 554 PEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLT 613
Query: 591 SLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
S + I++RD RFH F DG CSC DYW
Sbjct: 614 SKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 159/362 (43%), Gaps = 42/362 (11%)
Query: 52 LVALKSSSSLYCCRVIHARVIK-SLDYRDGFIGDQLVSCYLNMG-ATPDAQLLFDEMPNK 109
L L S +L IH IK +D F G ++ C +++ A P A+ L P
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
D +N+LV G+S+ + N ++VF M + + +F VI A ++ G +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRP 229
HC A+K G+E + V TLI MYG G V+ A K+F M + N+V+WN+++ C +
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 230 NEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTL 289
A F M L N T +
Sbjct: 189 AGAREIFDKM---------------------------------------LVRNHTSWNVM 209
Query: 290 LNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDH 349
L Y K G L ++ ++F+E+ D V+ + M+ G A +G E+ +F R GM P+
Sbjct: 210 LAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNE 269
Query: 350 VTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIK 409
V+ T +LSACS SG + GK + G + + ++D+ RCG + A+ + +
Sbjct: 270 VSLTGVLSACSQSGSFEFGK-ILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 328
Query: 410 NM 411
M
Sbjct: 329 GM 330
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/528 (34%), Positives = 297/528 (56%), Gaps = 14/528 (2%)
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL-----ELNELTFISVISA 156
+F +P WN+++ GF+ S + M ++ LT + A
Sbjct: 59 IFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKA 118
Query: 157 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSW 216
CA A +HC + G+ + TL++ Y K G + SA+KLF M +++ SW
Sbjct: 119 CARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASW 178
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT 276
N+++A R +EA+ + M G+ E T+V+ L AC HL + E + IF
Sbjct: 179 NALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACS--HLGDVKEGEN--IFH 234
Query: 277 CGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQ 335
++N+ + +++YSK G ++ + +VF + + K V M++G+A+HG A++
Sbjct: 235 GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALE 294
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
F++ G++PD V++ L+AC H+GLV+ G F M+ GV+ + HY C+VDLL
Sbjct: 295 IFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLL 353
Query: 396 GRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYI 455
R G L +A ++I +M P+ +W +LLGAS +Y ++ + + A+ + + ++ +++
Sbjct: 354 SRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFV 413
Query: 456 MLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHK 515
+LSN+Y+A G W D +VR M++K + + PG S+IE IH F D SH +I++
Sbjct: 414 LLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYE 473
Query: 516 KLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLV---SAADMPLV 572
K++E+ KI+E G+V++T +LHD+ EE K N + HSEK+A+AYGL++ + + P+
Sbjct: 474 KIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVR 533
Query: 573 IIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+I NLRIC DCH K +S I KR II+RD RFH F DG CSC D+W
Sbjct: 534 VINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 144/309 (46%), Gaps = 30/309 (9%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK 138
D + L+ Y G A LFDEMP +D SWN+L++G M ++ M+
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 139 SDLDLELNELTFISVISACA-LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGF 197
++ + +E+T ++ + AC+ L +E H + V V N I+MY K GF
Sbjct: 203 TE-GIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND-----NVIVSNAAIDMYSKCGF 256
Query: 198 VDSAFKLFWAMT-EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
VD A+++F T ++++V+WN+M+ +G + A+ F + NG+ PD+ + ++ L
Sbjct: 257 VDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALT 316
Query: 257 ACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK-PDKV 315
AC L +V + G++ N+ +++L S+ GRL + + +S PD V
Sbjct: 317 ACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPV 376
Query: 316 ACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVM 375
++L ++ E + R I+E G+ ++G F ++
Sbjct: 377 LWQSLLGASEIYS-DVEMAEIASREIKE------------------MGVNNDGD--FVLL 415
Query: 376 SDVYGVQPR 384
S+VY Q R
Sbjct: 416 SNVYAAQGR 424
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 183/512 (35%), Positives = 285/512 (55%), Gaps = 45/512 (8%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+H+ + KS D +IG LV Y G DAQ +FDEM +++ VSWNSL++ F + G
Sbjct: 174 VHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGP 233
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLG-MELQVKVV 185
+ VF +M +E +E+T SVISACA A + GQ VH VK + + +
Sbjct: 234 AVEALDVFQMMLES-RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 186 NTLINMYGK--------FGF-----------------------VDSAFKLFWAMTEQNMV 214
N ++MY K F F +A +F M E+N+V
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 215 SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACE---TLHLRRLVEA-- 269
SWN+++A TQNG EA++ F +++ + P + ++L+AC LHL
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 270 -VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHG 328
HG F G +++I + +L+++Y K G + VF ++ + D V+ AM+ G+A +G
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 329 CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY 388
G EA++ F + G +PDH+T +LSAC H+G V+EG+HYF M+ +GV P DHY
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 389 SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDP 448
+CMVDLLGR G L +AK +I+ MP +P+S +WG+LL A +V+ NI++GK AE L+ ++P
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEP 592
Query: 449 SDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHP 508
S+ Y++LSN+Y+ G W D VR M+ + + + PGCS+I+ H F+V D SHP
Sbjct: 593 SNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHP 652
Query: 509 DSDKIHKKLEEVMSKIQ------EFGFVSETE 534
+IH L+ ++++++ E G +S E
Sbjct: 653 RKKQIHSLLDILIAEMRPEQDHTEIGSLSSEE 684
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 221/491 (45%), Gaps = 78/491 (15%)
Query: 46 PLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDE 105
P L +KS S R +HA VIKS + FI ++L+ Y G+ D + +FD+
Sbjct: 21 PFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDK 80
Query: 106 MPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS-------------------------- 139
MP ++ +WNS+V+G +K G L S+F M
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 140 ----DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKF 195
LNE +F SV+SAC+ +G VH K V + + L++MY K
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 196 GFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
G V+ A ++F M ++N+VSWNS++ QNG EA++ F MM + + PDE T+ S++
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 256 QACETLHLRRLVEAVHG-VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDK 314
AC +L ++ + VHG V+ L +I + +++Y+K R+ + +F + +
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 315 VACTAMLSGYAM-------------------------------HGCGTEAIQFFERTIRE 343
+A T+M+SGYAM +G EA+ F RE
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 344 GMEPDHVTFTHLLSACS-----HSGL---VDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
+ P H +F ++L AC+ H G+ V KH F+ S G + + + ++D+
Sbjct: 381 SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS---GEEDDIFVGNSLIDMY 437
Query: 396 GRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIA-LDPSDPRNY 454
+CG + + + + M E + W A++ + G EA E L+ + ++
Sbjct: 438 VKCGCVEEGYLVFRKM-MERDCVSWNAMIIG---FAQNGYGNEALELFREMLESGEKPDH 493
Query: 455 IMLSNIYSASG 465
I + + SA G
Sbjct: 494 ITMIGVLSACG 504
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 155/330 (46%), Gaps = 51/330 (15%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDG---------------------F 81
P + +++++ A S S++ + +H RV+K+ R+ F
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 82 IGD-----------QLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNC 130
I D ++S Y +T A+L+F +M ++ VSWN+L++G+++ G+
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 131 MSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQ------VKV 184
+S+F ++K + + +F +++ ACA G H +K G + Q + V
Sbjct: 371 LSLFCLLKRE-SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFV 429
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
N+LI+MY K G V+ + +F M E++ VSWN+M+ QNG NEA+ F M +G
Sbjct: 430 GNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE 489
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIV------TTLLNLYSKIGR 298
PD TM+ +L AC H + E H + + + + T +++L + G
Sbjct: 490 KPDHITMIGVLSACG--HAGFVEEGRH---YFSSMTRDFGVAPLRDHYTCMVDLLGRAGF 544
Query: 299 LNASCKVFAEIS-KPDKVACTAMLSGYAMH 327
L + + E+ +PD V ++L+ +H
Sbjct: 545 LEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/477 (35%), Positives = 262/477 (54%), Gaps = 10/477 (2%)
Query: 58 SSSLYCCRV---------IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPN 108
S+ + CC V +HA + K I L++ Y G PDA L+F M
Sbjct: 377 SNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE 436
Query: 109 KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD-LELNELTFISVISACALAKAREEGQ 167
KD V+W SL+SG K G + VF MK D D L+ + SV +ACA +A G
Sbjct: 437 KDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGL 496
Query: 168 YVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNG 227
VH +K G+ L V V ++LI++Y K G + A K+F +M+ +NMV+WNSM++ ++N
Sbjct: 497 QVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNN 556
Query: 228 RPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVT 287
P +I+ F++M G+FPD ++ S+L A + +++HG G+ + +
Sbjct: 557 LPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKN 616
Query: 288 TLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
L+++Y K G + +F ++ + M+ GY HG A+ F+ + G P
Sbjct: 617 ALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESP 676
Query: 348 DHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL 407
D VTF L+SAC+HSG V+EGK+ F+ M YG++P ++HY+ MVDLLGR GLL +A
Sbjct: 677 DDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSF 736
Query: 408 IKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLW 467
IK MP E +S +W LL ASR +HN+ +G +AE L+ ++P Y+ L N+Y +GL
Sbjct: 737 IKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLK 796
Query: 468 SDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKI 524
++AAK+ LMK K L + PGCS+IE ++ + F S P +I L + S +
Sbjct: 797 NEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 190/389 (48%), Gaps = 12/389 (3%)
Query: 31 ETSVRFHSISTYPRDPLVST----LLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQL 86
E+S+ + ++ LVST L A S + R IH V+K + D ++ L
Sbjct: 254 ESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSL 313
Query: 87 VSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELN 146
+S Y G +A+ +F + +K WN++V+ +++ + + +F M+ L +
Sbjct: 314 LSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP-D 372
Query: 147 ELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFW 206
T +VIS C++ G+ VH K ++ + + L+ +Y K G A+ +F
Sbjct: 373 SFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFK 432
Query: 207 AMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMR--LNGLFPDEATMVSLLQACETLHLR 264
+M E++MV+W S+++ +NG+ EA+ F M+ + L PD M S+ AC L
Sbjct: 433 SMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEAL 492
Query: 265 RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGY 324
R VHG + GL N+ + ++L++LYSK G + KVF +S + VA +M+S Y
Sbjct: 493 RFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCY 552
Query: 325 AMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQ 382
+ + +I F + +G+ PD V+ T +L A S + + +GK H + + G+
Sbjct: 553 SRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR---LGIP 609
Query: 383 PRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
+ ++D+ +CG A+ + K M
Sbjct: 610 SDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 181/365 (49%), Gaps = 10/365 (2%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNK-DFVSWNSLVSGFSK 123
+ IH ++++ D F+ L+ Y G + DA +F E+ +K + V WN ++ GF
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 124 RGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVK 183
G + + ++ + K++ ++L +F + AC+ ++ G+ +HC VK+G+
Sbjct: 250 SGICESSLDLYMLAKNN-SVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY 308
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG 243
V +L++MY K G V A +F + ++ + WN+MVA +N A++ F MR
Sbjct: 309 VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKS 368
Query: 244 LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
+ PD T+ +++ C L L ++VH +F + TI + LL LYSK G +
Sbjct: 369 VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAY 428
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE--RTIREGMEPDHVTFTHLLSACSH 361
VF + + D VA +++SG +G EA++ F + + ++PD T + +AC+
Sbjct: 429 LVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG 488
Query: 362 SGLVDEGKHYFQVMSDVYGVQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMPFEPNSGV 419
++ + QV + L+ + S ++DL +CGL A ++ +M E N
Sbjct: 489 ---LEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVA 544
Query: 420 WGALL 424
W +++
Sbjct: 545 WNSMI 549
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 184/408 (45%), Gaps = 29/408 (7%)
Query: 32 TSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYR-DGFIGDQLVSCY 90
+S + S+ T+P +LL A + ++L + IH V+ L +R D FI LV+ Y
Sbjct: 53 SSPFWTSVFTFP------SLLKACSALTNLSYGKTIHGSVV-VLGWRYDPFIATSLVNMY 105
Query: 91 LNMGATPDAQLLFDEMPN-------KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL 143
+ G A +FD +D WNS++ G+ K + F M L
Sbjct: 106 VKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRM---LVF 162
Query: 144 ELNELTFISVISACALAKA----REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ F I + K REEG+ +H ++ ++ + LI+MY KFG
Sbjct: 163 GVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222
Query: 200 SAFKLFWAMTEQ-NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQAC 258
A+++F + ++ N+V WN M+ +G +++ + + + N + + L AC
Sbjct: 223 DAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGAC 282
Query: 259 ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACT 318
+H + GL + + T+LL++YSK G + + VF+ +
Sbjct: 283 SQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWN 342
Query: 319 AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV 378
AM++ YA + G A+ F ++ + PD T ++++S CS GL + GK V +++
Sbjct: 343 AMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK---SVHAEL 399
Query: 379 YG--VQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+ +Q S ++ L +CG DA + K+M E + WG+L+
Sbjct: 400 FKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLI 446
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 150/326 (46%), Gaps = 16/326 (4%)
Query: 113 SWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCC 172
S NS + ++G+ + ++S + TF S++ AC+ G+ +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 173 AVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF--WAMTE-----QNMVSWNSMVAVCTQ 225
V LG + +L+NMY K GF+D A ++F W+ ++ +++ WNSM+ +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLV-EAVHGVIFTCGLDENI 283
R E + F M + G+ PD ++ ++ C+ + RR + +HG + LD +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 284 TIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
+ T L+++Y K G + +VF EI K + V M+ G+ G ++ +
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC--MVDLLGRCGL 400
++ +FT L ACS S G+ Q+ DV + D Y C ++ + +CG+
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGR---QIHCDVVKMGLHNDPYVCTSLLSMYSKCGM 322
Query: 401 LNDAKELIKNMPFEPNSGVWGALLGA 426
+ +A E + + + +W A++ A
Sbjct: 323 VGEA-ETVFSCVVDKRLEIWNAMVAA 347
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query: 38 SISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATP 97
S +P ++++LVA+ S++SL + +H ++ D + + L+ Y+ G +
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 98 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 157
A+ +F +M +K ++WN ++ G+ GD +S+F MK + +++TF+S+ISAC
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE-SPDDVTFLSLISAC 688
Query: 158 ALAKAREEGQYV-HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM 208
+ EEG+ + G+E ++ ++++ G+ G ++ A+ AM
Sbjct: 689 NHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 266/485 (54%), Gaps = 8/485 (1%)
Query: 50 TLLVALKSSSSLYCCRVIHARVIKSLDYRDGFI-----GDQLVSCYLNMGATPDAQLLFD 104
T +ALK+ + L +V + + I + GF+ + L + Y G D LF+
Sbjct: 211 TFAIALKACAGLR--QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFE 268
Query: 105 EMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKARE 164
M +D VSW SL+ + + G + F M++ + NE TF S+ SACA
Sbjct: 269 NMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNS-QVPPNEQTFASMFSACASLSRLV 327
Query: 165 EGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCT 224
G+ +HC + LG+ + V N+++ MY G + SA LF M ++++SW++++
Sbjct: 328 WGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYC 387
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENIT 284
Q G E YFS MR +G P + + SLL + + VH + GL++N T
Sbjct: 388 QAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNST 447
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
+ ++L+N+YSK G + + +F E + D V+ TAM++GYA HG EAI FE++++ G
Sbjct: 448 VRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG 507
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
PD VTF +L+AC+HSG +D G HYF +M + Y ++P +HY CMVDLL R G L+DA
Sbjct: 508 FRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDA 567
Query: 405 KELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSAS 464
+++I M ++ + VW LL A + +I G+ AAE ++ LDP+ + L+NIYS++
Sbjct: 568 EKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSST 627
Query: 465 GLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKI 524
G +AA VR MK K + + PG S I+ + + FV D HP S+ I+ LE +S
Sbjct: 628 GNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVSGA 687
Query: 525 QEFGF 529
+ F
Sbjct: 688 EAHRF 692
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 186/377 (49%), Gaps = 4/377 (1%)
Query: 28 LLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLV 87
L S V H++S P ++S +L A SS++ +HA +K+ ++G L+
Sbjct: 93 LFSAMRVVDHAVS--PDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLL 150
Query: 88 SCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNE 147
Y +G + +F EMP ++ V+W ++++G G ++ FS M +L +
Sbjct: 151 DMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-DT 209
Query: 148 LTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWA 207
TF + ACA + + G+ +H + G + V N+L MY + G + LF
Sbjct: 210 YTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFEN 269
Query: 208 MTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLV 267
M+E+++VSW S++ + G+ +A+ F MR + + P+E T S+ AC +L
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG 329
Query: 268 EAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMH 327
E +H + + GL++++++ +++ +YS G L ++ +F + D ++ + ++ GY
Sbjct: 330 EQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQA 389
Query: 328 GCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH 387
G G E ++F + G +P LLS + +++ G+ ++ +G++
Sbjct: 390 GFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTV 448
Query: 388 YSCMVDLLGRCGLLNDA 404
S ++++ +CG + +A
Sbjct: 449 RSSLINMYSKCGSIKEA 465
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 154/323 (47%), Gaps = 4/323 (1%)
Query: 91 LNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS-DLDLELNELT 149
+N G A+ +FD+MP+ D VSW S++ + + + +FS M+ D + +
Sbjct: 51 INAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSV 110
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
V+ AC + G+ +H AVK + V V ++L++MY + G +D + ++F M
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 210 EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA 269
+N V+W +++ GR E + YFS M + D T L+AC L + +A
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 270 VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC 329
+H + G + + +L +Y++ G + +F +S+ D V+ T+++ Y G
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 330 GTEAIQFFERTIREGMEPDHVTFTHLLSAC-SHSGLVDEGKHYFQVMSDVYGVQPRLDHY 388
+A++ F + + P+ TF + SAC S S LV + + V+S G+ L
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLS--LGLNDSLSVS 348
Query: 389 SCMVDLLGRCGLLNDAKELIKNM 411
+ M+ + CG L A L + M
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGM 371
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/515 (30%), Positives = 292/515 (56%), Gaps = 5/515 (0%)
Query: 28 LLSETSVRFH---SISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGD 84
L+ E+ F+ S P S+LL ++ +L C+ IH +++ D F+
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 85 QLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLE 144
L+ Y AQ +F + + D V + +++SG+ G + + +F + + +
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL-VKVKIS 438
Query: 145 LNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKL 204
NE+T +S++ + A + G+ +H +K G + + + +I+MY K G ++ A+++
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 205 FWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLR 264
F ++++++VSWNSM+ C Q+ P+ AI+ F M ++G+ D ++ + L AC L
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE 558
Query: 265 RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGY 324
+A+HG + L ++ +TL+++Y+K G L A+ VF + + + V+ ++++
Sbjct: 559 SFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAAC 618
Query: 325 AMHGCGTEAIQFFERTI-REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQP 383
HG +++ F + + G+ PD +TF ++S+C H G VDEG +F+ M++ YG+QP
Sbjct: 619 GNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQP 678
Query: 384 RLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENL 443
+ +HY+C+VDL GR G L +A E +K+MPF P++GVWG LLGA R++ N+ + + A+ L
Sbjct: 679 QQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKL 738
Query: 444 IALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVD 503
+ LDPS+ Y+++SN ++ + W KVR+LMK + + + PG S+IE + H FV
Sbjct: 739 MDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSG 798
Query: 504 DYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILH 538
D +HP+S I+ L ++ +++ G++ + LH
Sbjct: 799 DVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 166/333 (49%), Gaps = 6/333 (1%)
Query: 81 FIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD 140
F+ L+ YL G LFD + KD V WN +++G++K G L + + FSVM+ D
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 141 LDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
+ N +TF V+S CA + G +H V G++ + + N+L++MY K G D
Sbjct: 234 -QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 201 AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACET 260
A KLF M+ + V+WN M++ Q+G E++ +F M +G+ PD T SLL +
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 261 LHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAM 320
+ +H I + +I + + L++ Y K ++ + +F++ + D V TAM
Sbjct: 353 FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 321 LSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDV 378
+SGY +G ++++ F ++ + P+ +T +L + G+ H F +
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-- 470
Query: 379 YGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
G R + ++D+ +CG +N A E+ + +
Sbjct: 471 -GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 160/322 (49%), Gaps = 5/322 (1%)
Query: 41 TYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQ 100
T PR +S LL A + + L + +HA +I + D + ++++ Y G+ D
Sbjct: 33 TIPRR--LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCG 90
Query: 101 LLFD--EMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 158
+F ++ WNS++S F + G L ++ + M + + TF ++ AC
Sbjct: 91 KMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLC-FGVSPDVSTFPCLVKACV 149
Query: 159 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNS 218
K + ++ LGM+ V ++LI Y ++G +D KLF + +++ V WN
Sbjct: 150 ALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNV 209
Query: 219 MVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCG 278
M+ + G + I FS+MR++ + P+ T +L C + L L +HG++ G
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG 269
Query: 279 LDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
+D +I +LL++YSK GR + + K+F +S+ D V M+SGY G E++ FF
Sbjct: 270 VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFY 329
Query: 339 RTIREGMEPDHVTFTHLLSACS 360
I G+ PD +TF+ LL + S
Sbjct: 330 EMISSGVLPDAITFSSLLPSVS 351
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 176/362 (48%), Gaps = 16/362 (4%)
Query: 71 VIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNC 130
V+ +D+ +G I + L+S Y G DA LF M D V+WN ++SG+ + G +
Sbjct: 266 VVSGVDF-EGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEES 324
Query: 131 MSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLIN 190
++ F M S L + +TF S++ + + + E + +HC ++ + L + + + LI+
Sbjct: 325 LTFFYEMISSGVLP-DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID 383
Query: 191 MYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
Y K V A +F ++V + +M++ NG +++ F + + P+E T
Sbjct: 384 AYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEIT 443
Query: 251 MVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
+VS+L L +L +HG I G D I ++++Y+K GR+N + ++F +S
Sbjct: 444 LVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS 503
Query: 311 KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK- 369
K D V+ +M++ A + AI F + G+ D V+ + LSAC++ GK
Sbjct: 504 KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKA 563
Query: 370 -HYFQV----MSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
H F + SDVY S ++D+ +CG L A + K M E N W +++
Sbjct: 564 IHGFMIKHSLASDVYS-------ESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSII 615
Query: 425 GA 426
A
Sbjct: 616 AA 617
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 130/276 (47%), Gaps = 4/276 (1%)
Query: 153 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM--TE 210
++ AC+ +G+ VH + + ++ MY G K+F+ +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 211 QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAV 270
++ WNS+++ +NG N+A+ ++ M G+ PD +T L++AC L + ++ +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 271 HGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCG 330
+ + G+D N + ++L+ Y + G+++ K+F + + D V ML+GYA G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 331 TEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC 390
I+ F + + P+ VTF +LS C+ L+D G ++ V GV +
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV-VSGVDFEGSIKNS 279
Query: 391 MVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
++ + +CG +DA +L + M ++ W ++
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 298 bits (763), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 297/549 (54%), Gaps = 7/549 (1%)
Query: 78 RDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM 137
+D ++++ Y++ G A +F + K+ +++N+L++GF + G + +F+ M
Sbjct: 349 QDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDM 408
Query: 138 KSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGF 197
+EL + + S + AC L ++ + +H +K G + L++M +
Sbjct: 409 LQR-GVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCER 467
Query: 198 VDSAFKLF--WAMTEQNMVSWNSMVAVCTQNGRPNEAINYF-SMMRLNGLFPDEATMVSL 254
+ A ++F W + + S++ +NG P++A++ F + LF DE ++ +
Sbjct: 468 MADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLI 527
Query: 255 LQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDK 314
L C TL R + +H G +I++ +L+++Y+K + + K+F + + D
Sbjct: 528 LAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDV 587
Query: 315 VACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSAC--SHSGLVDEGKHYF 372
++ +++S Y + G EA+ + R + ++PD +T T ++SA + S + + F
Sbjct: 588 ISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLF 647
Query: 373 QVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHN 432
M +Y ++P +HY+ V +LG GLL +A++ I +MP +P V ALL + R++ N
Sbjct: 648 LSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSN 707
Query: 433 ISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIE 492
S+ K A+ +++ P P YI+ SNIYSASG W + +R M+ + ++P S+I
Sbjct: 708 TSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWII 767
Query: 493 HGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKH 552
H NKIH F D SHP I++ LE ++ + + G+ TE +L +V E +K + + H
Sbjct: 768 HENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHH 827
Query: 553 SEKIALAYGLLVS-AADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSD 611
S K+A+ YG+L S P+ ++KN+ +C DCH+ K++S++ KR I++RD+ FHHF +
Sbjct: 828 SAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVN 887
Query: 612 GLCSCGDYW 620
G CSC D W
Sbjct: 888 GKCSCRDLW 896
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 205/441 (46%), Gaps = 46/441 (10%)
Query: 11 TLTLSPRILHCLPTCCTLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLY---CCRVI 67
+L+LSP +H C + S +S F T + ++ L+ S+ + + +
Sbjct: 46 SLSLSPATIH---ECSSSSSSSSSSFDKEETEDIESVIDGFFYLLRLSAQYHDVEVTKAV 102
Query: 68 HARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDL 127
HA +K L +G+ L+S YL +G +A L+F + + VS+ +L+SGFS+
Sbjct: 103 HASFLK-LREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLE 161
Query: 128 GNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNT 187
+ VF M+ ++ NE TF+++++AC G +H VK G V V N+
Sbjct: 162 IEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNS 221
Query: 188 LINMYGK--FGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAIN-YFSMMRLNGL 244
L+++Y K D KLF + ++++ SWN++V+ + G+ ++A + ++ M R+ G
Sbjct: 222 LMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGF 281
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSK--------- 295
D T+ +LL +C + +HG GL + +++ L+ YSK
Sbjct: 282 GVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVES 341
Query: 296 ----------------------IGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEA 333
G ++++ ++FA +++ + + A+++G+ +G G +A
Sbjct: 342 LYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKA 401
Query: 334 IQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQV--MSDVYGVQPRLDHYSCM 391
++ F ++ G+E + T + AC GLV E K Q+ +G + +
Sbjct: 402 LKLFTDMLQRGVELTDFSLTSAVDAC---GLVSEKKVSEQIHGFCIKFGTAFNPCIQTAL 458
Query: 392 VDLLGRCGLLNDAKELIKNMP 412
+D+ RC + DA+E+ P
Sbjct: 459 LDMCTRCERMADAEEMFDQWP 479
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 162/338 (47%), Gaps = 36/338 (10%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCY-LNMGATPDAQL-LFDEMPNKDFVSWNSLVSGFSKR 124
IH ++KS F+ + L+S Y + G++ D L LFDE+P +D SWN++VS K
Sbjct: 203 IHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKE 262
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G +F M ++ T +++S+C + G+ +H A+++G+ ++ V
Sbjct: 263 GKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSV 322
Query: 185 VNTLINMYGK-------------------------------FGFVDSAFKLFWAMTEQNM 213
N LI Y K FG VDSA ++F +TE+N
Sbjct: 323 NNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNT 382
Query: 214 VSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGV 273
+++N+++A +NG +A+ F+ M G+ + ++ S + AC + +++ E +HG
Sbjct: 383 ITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGF 442
Query: 274 IFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK--PDKVACTAMLSGYAMHGCGT 331
G N I T LL++ ++ R+ + ++F + A T+++ GYA +G
Sbjct: 443 CIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPD 502
Query: 332 EAIQFFERTI-REGMEPDHVTFTHLLSACSHSGLVDEG 368
+A+ F RT+ + + D V+ T +L+ C G + G
Sbjct: 503 KAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/482 (36%), Positives = 263/482 (54%), Gaps = 21/482 (4%)
Query: 41 TYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGA--TPD 98
TYP LL A S L +++H + K D ++ + L+ CY G D
Sbjct: 119 TYP------FLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRD 172
Query: 99 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC- 157
A LF++M +D VSWNS++ G K G+L + +F M + N T + + C
Sbjct: 173 AMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWN--TMLDGYARCR 230
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT--EQNMVS 215
++KA E + + E +T++ Y K G ++ A +F M +N+V+
Sbjct: 231 EMSKAFELFEKMP--------ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVT 282
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
W ++A + G EA M +GL D A ++S+L AC L L +H ++
Sbjct: 283 WTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILK 342
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
L N ++ LL++Y+K G L + VF +I K D V+ ML G +HG G EAI+
Sbjct: 343 RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIE 402
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
F R REG+ PD VTF +L +C+H+GL+DEG YF M VY + P+++HY C+VDLL
Sbjct: 403 LFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLL 462
Query: 396 GRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYI 455
GR G L +A ++++ MP EPN +WGALLGA R+++ + I KE +NL+ LDP DP NY
Sbjct: 463 GRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYS 522
Query: 456 MLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHK 515
+LSNIY+A+ W A +R+ MK+ + + G S +E + IH F V D SHP SD+I++
Sbjct: 523 LLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQ 582
Query: 516 KL 517
L
Sbjct: 583 ML 584
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 179/400 (44%), Gaps = 30/400 (7%)
Query: 52 LVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDF 111
L L ++L + +HA++I+ + D I +L+S T A +F+++ +
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 112 VSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHC 171
NSL+ ++ VFS M+ L + T+ ++ AC+ + +H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQR-FGLFADNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 172 CAVKLGMELQVKVVNTLINMYGKFG--FVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRP 229
KLG+ + V N LI+ Y + G V A KLF M+E++ VSWNSM+ + G
Sbjct: 142 HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGEL 201
Query: 230 NEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTL 289
+A F M L TM+ C R + +A +F + N +T+
Sbjct: 202 RDARRLFDEMPQRDLI-SWNTMLDGYARC-----REMSKAFE--LFEKMPERNTVSWSTM 253
Query: 290 LNLYSKIGRLNASCKVFAEISKPDK--VACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
+ YSK G + + +F ++ P K V T +++GYA G EA + ++ + G++
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 348 DHVTFTHLLSACSHSGLVDEGKHYFQVM------SDVYGVQPRLDHYSCMVDLLGRCGLL 401
D +L+AC+ SGL+ G ++ S+ Y + LD Y+ +CG L
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYA-------KCGNL 366
Query: 402 NDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAE 441
A ++ ++P + + W +L V+ + GKEA E
Sbjct: 367 KKAFDVFNDIP-KKDLVSWNTMLHGLGVHGH---GKEAIE 402
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 19/292 (6%)
Query: 201 AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACET 260
A ++F + E N+ NS++ QN +P +A FS M+ GLF D T LL+AC
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 261 LHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNA--SCKVFAEISKPDKVACT 318
+V+ +H I GL +I + L++ YS+ G L + K+F ++S+ D V+
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 319 AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV 378
+ML G G +A + F+ E + D +++ +L + + + F+ M +
Sbjct: 190 SMLGGLVKAGELRDARRLFD----EMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER 245
Query: 379 YGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGV-WGALLGASRVYHNISIGK 437
V +S MV + G + A+ + MP + V W ++ Y + K
Sbjct: 246 NTVS-----WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG---YAEKGLLK 297
Query: 438 EAAENLIALDPS----DPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARN 485
EA + + S D I + + SGL S ++ +++K L N
Sbjct: 298 EADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 349
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 254/455 (55%), Gaps = 32/455 (7%)
Query: 94 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
G +A+ +FDE P +D VSWN L++G+ K G+ + V+ +M+S+ ++ +++T I +
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESE-GVKPDDVTMIGL 263
Query: 154 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINM---------------------- 191
+S+C++ G+ + + G+ + + +VN L++M
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI 323
Query: 192 ---------YGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLN 242
Y + G +D + KLF M E+++V WN+M+ Q R +A+ F M+ +
Sbjct: 324 VSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS 383
Query: 243 GLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNAS 302
PDE TM+ L AC L + +H I L N+ + T+L+++Y+K G ++ +
Sbjct: 384 NTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEA 443
Query: 303 CKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHS 362
VF I + + TA++ G A+HG + AI +F I G+ PD +TF LLSAC H
Sbjct: 444 LSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHG 503
Query: 363 GLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGA 422
G++ G+ YF M + + P+L HYS MVDLLGR GLL +A L+++MP E ++ VWGA
Sbjct: 504 GMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGA 563
Query: 423 LLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVL 482
LL R++ N+ +G++AA+ L+ LDPSD Y++L +Y + +W DA + R +M + +
Sbjct: 564 LLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGV 623
Query: 483 ARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKL 517
+ PGCS IE + F+V D S P+S+KI+ +L
Sbjct: 624 EKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 182/415 (43%), Gaps = 37/415 (8%)
Query: 47 LVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVS-CYLNMGATPDAQL-LFD 104
L + LL L+ L + I A++I + D F +L++ C L+ D + +
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 105 EMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD--LDLELNELTFISVISACALAKA 162
+ N + SWN + GFS+ + ++ M + + T+ + CA +
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
G + +KL +EL V N I+M+ G +++A K+F +++VSWN ++
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
+ G +AI + +M G+ PD+ TM+ L+ +C L + + + GL
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC------------- 329
I +V L++++SK G ++ + ++F + K V+ T M+SGYA G
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEE 351
Query: 330 ------------------GTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHY 371
G +A+ F+ +PD +T H LSACS G +D G +
Sbjct: 352 KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI-W 410
Query: 372 FQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
+ Y + + + +VD+ +CG +++A + + NS + A++G
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGG 464
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 187/588 (31%), Positives = 316/588 (53%), Gaps = 32/588 (5%)
Query: 58 SSSLYCCRVIHARVIKSLDYRDG-----FIGDQLVSCY---LNMGATPDAQLLFDEMPNK 109
SS L CR + + L + G ++ + ++S Y + A +A +F+ + K
Sbjct: 165 SSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFK 224
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
+ V+WNS+++ F + VF M SD + + T +++ S+ + +
Sbjct: 225 NLVTWNSMIAAFQCCNLGKKAIGVFMRMHSD-GVGFDRATLLNICSSLYKSSDLVPNEVS 283
Query: 170 HCC------AVKLGMELQVKVVNTLINMYGKF--GFVDSAFKLFWAMTE-QNMVSWNSMV 220
CC VK G+ Q +V LI +Y + + D +KLF M+ +++V+WN ++
Sbjct: 284 KCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTD-CYKLFMEMSHCRDIVAWNGII 342
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLD 280
P AI+ F +R L PD T S+L+AC L R ++H + G
Sbjct: 343 TAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFL 401
Query: 281 ENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERT 340
+ + +L++ Y+K G L+ +VF ++ D V+ +ML Y++HG + F++
Sbjct: 402 ADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM 461
Query: 341 IREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGL 400
+ PD TF LLSACSH+G V+EG F+ M + P+L+HY+C++D+L R
Sbjct: 462 ---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAER 518
Query: 401 LNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIAL-DPSDPRNYIMLSN 459
+A+E+IK MP +P++ VW ALLG+ R + N +GK AA+ L L +P++ +YI +SN
Sbjct: 519 FAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSN 578
Query: 460 IYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEE 519
IY+A G +++A M+T + + P S+ E GNK+H F PD + ++++L+
Sbjct: 579 IYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKR 638
Query: 520 VMSKIQEFGFVSE--TESILHDVAEEIKTNMVNKHSEKIALAYGLL----VSAADMPLV- 572
++S ++E G+V E + S + E+ + N+++ HSEK+ALA+ ++ S + L+
Sbjct: 639 LISWLKEMGYVPEMRSASQDIEDEEQEEDNLLH-HSEKLALAFAVMEGRKSSDCGVNLIQ 697
Query: 573 IIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
I+KN RIC DCH K S + + I++RD+ RFHHF D CSC DYW
Sbjct: 698 IMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 158/313 (50%), Gaps = 31/313 (9%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
+ + L++ Y G A+ +FD MP ++ VSW +L++G+ + G+ +FS M S
Sbjct: 98 LANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS-- 155
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK---FGFV 198
NE T SV+++C E G+ VH A+KLG+ + V N +I+MYG+
Sbjct: 156 HCFPNEFTLSSVLTSCRY----EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAA 211
Query: 199 DSAFKLFWAMTEQNMVSWNSMVAV--CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
A+ +F A+ +N+V+WNSM+A C G+ +AI F M +G+ D AT LL
Sbjct: 212 YEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGK--KAIGVFMRMHSDGVGFDRAT---LLN 266
Query: 257 ACETLH---------LRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC-KVF 306
C +L+ + + +H + GL + T L+ +YS++ C K+F
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLF 326
Query: 307 AEISK-PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
E+S D VA +++ +A++ AI F + +E + PD TF+ +L AC +GLV
Sbjct: 327 MEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLV 383
Query: 366 DEGKHYFQVMSDV 378
+H + + V
Sbjct: 384 T-ARHALSIHAQV 395
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 16/243 (6%)
Query: 123 KRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG--QYVHCCAVKLGMEL 180
+ GD+ +S+F +L ++ + ++ ACA + +G + H +
Sbjct: 38 RSGDIRRAVSLFYSAPVELQ---SQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQ 94
Query: 181 QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMR 240
V + N LINMY K G + A ++F M E+N+VSW +++ Q G E FS M
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM- 153
Query: 241 LNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
L+ FP+E T+ S+L +C ++ VHG+ GL +I + ++++Y +
Sbjct: 154 LSHCFPNEFTLSSVLTSCRYEPGKQ----VHGLALKLGLHCSIYVANAVISMYGRCHDGA 209
Query: 301 ASCK---VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLS 357
A+ + VF I + V +M++ + G +AI F R +G+ D T LL+
Sbjct: 210 AAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT---LLN 266
Query: 358 ACS 360
CS
Sbjct: 267 ICS 269
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/486 (33%), Positives = 270/486 (55%), Gaps = 3/486 (0%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + TL+ A S+ R +H VI+ D + + L++CY A +A L
Sbjct: 161 PDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNL 220
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F + KD +SW+++++ + + G + VF+ M D E N T + V+ ACA A
Sbjct: 221 FKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD-GTEPNVATVLCVLQACAAAHD 279
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
E+G+ H A++ G+E +VKV L++MY K + A+ +F + +++VSW ++++
Sbjct: 280 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 339
Query: 223 CTQNGRPNEAINYFSMMRL-NGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
T NG + +I FS+M L N PD MV +L +C L + H + G D
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
N I +L+ LYS+ G L + KVF I+ D V T++++GY +HG GT+A++ F +
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 459
Query: 342 REG-MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGL 400
+ ++P+ VTF +LSACSH+GL+ EG F++M + Y + P L+HY+ +VDLLGR G
Sbjct: 460 KSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGD 519
Query: 401 LNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNI 460
L+ A E+ K MPF P + G LLGA R++ N + + A+ L L+ + Y+++SN+
Sbjct: 520 LDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNV 579
Query: 461 YSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEV 520
Y G W + K+R +K + + + S IE K+HRFV DD HP+ + ++ L+E+
Sbjct: 580 YGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Query: 521 MSKIQE 526
++E
Sbjct: 640 DLHMKE 645
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 211/435 (48%), Gaps = 9/435 (2%)
Query: 50 TLLVALKSSSSLYCC---RVIHARVIKSLDY-RDGFIGDQLVSCYLNMGATPDAQLLFDE 105
TL VALK+ L +IH V K + D ++G L+ Y+ G +A +FDE
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 106 MPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
+ D V+W+S+VSGF K G + F M D+ + +T I+++SAC
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQ 225
G+ VH ++ G + +VN+L+N Y K A LF + E++++SW++++A Q
Sbjct: 182 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
NG EA+ F+ M +G P+ AT++ +LQAC H H + GL+ + +
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV 301
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE-G 344
T L+++Y K + VF+ I + D V+ A++SG+ ++G +I+ F + E
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 361
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
PD + +L +CS G +++ K + + YG + +V+L RCG L +A
Sbjct: 362 TRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 405 KELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSAS 464
++ + + ++ VW +L+ ++ + E +++ P LS + + S
Sbjct: 421 SKVFNGIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Query: 465 --GLWSDAAKVRALM 477
GL + ++ LM
Sbjct: 480 HAGLIHEGLRIFKLM 494
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 205/442 (46%), Gaps = 32/442 (7%)
Query: 95 ATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVI 154
++ DA+ +F EM + WN+L+ S+ + FS M D + + + T +
Sbjct: 9 SSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRD-EEKPDNFTLPVAL 67
Query: 155 SACALAKAREEGQYVHCCA---VKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
AC + G+ +H V LG +L V ++LI MY K G + A ++F + +
Sbjct: 68 KACGELREVNYGEMIHGFVKKDVTLGSDLYVG--SSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRL-NGLFPDEATMVSLLQACETLHLRRLVEAV 270
++V+W+SMV+ +NG P +A+ +F M + + + PD T+++L+ AC L RL V
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 271 HGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCG 330
HG + G ++++V +LLN Y+K + +F I++ D ++ + +++ Y +G
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 331 TEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC 390
EA+ F + +G EP+ T +L AC+ + +++G+ + ++ G++ + +
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LAIRKGLETEVKVSTA 304
Query: 391 MVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSD 450
+VD+ +C +A + +P + W AL+ + N +A +
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTL------------NGMAHRSIE 351
Query: 451 PRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDS 510
+ ++L N + A++ KVL F+E H +V+ Y +
Sbjct: 352 EFSIMLLEN----------NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVI-KYGFDSN 400
Query: 511 DKIHKKLEEVMSKIQEFGFVSE 532
I L E+ S+ G S+
Sbjct: 401 PFIGASLVELYSRCGSLGNASK 422
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Query: 194 KFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVS 253
KF A ++F MT++++ WN+++ ++ + E + +FS M + PD T+
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 254 LLQACETLHLRRLVEAVHGVIFT-CGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKP 312
L+AC L E +HG + L ++ + ++L+ +Y K GR+ + ++F E+ KP
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 313 DKVACTAMLSGYAMHGCGTEAIQFFERTIREG-MEPDHVTFTHLLSACS 360
D V ++M+SG+ +G +A++FF R + + PD VT L+SAC+
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 5/179 (2%)
Query: 29 LSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVS 88
+ E S+ +T P L+ +L + L + H+ VIK + FIG LV
Sbjct: 350 IEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVE 409
Query: 89 CYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNEL 148
Y G+ +A +F+ + KD V W SL++G+ G + F+ M +++ NE+
Sbjct: 410 LYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEV 469
Query: 149 TFISVISACALAKAREEGQYVHCCAV---KLGMELQVKVVNTLINMYGKFGFVDSAFKL 204
TF+S++SAC+ A EG + V +L L+ V L+++ G+ G +D+A ++
Sbjct: 470 TFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAV--LVDLLGRVGDLDTAIEI 526
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/494 (32%), Positives = 279/494 (56%), Gaps = 17/494 (3%)
Query: 36 FHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGA 95
F + T DP+ LL + +HA+V+K + I + ++S Y + G+
Sbjct: 206 FAPLLTLLDDPMFCNLL------------KQVHAKVLKLGLQHEITICNAMISSYADCGS 253
Query: 96 TPDAQLLFDEMP-NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVI 154
DA+ +FD + +KD +SWNS+++GFSK + +F M+ +E + T+ ++
Sbjct: 254 VSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW-VETDIYTYTGLL 312
Query: 155 SACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKF--GFVDSAFKLFWAMTEQN 212
SAC+ + + G+ +H +K G+E N LI+MY +F G ++ A LF ++ ++
Sbjct: 313 SACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKD 372
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
++SWNS++ Q G +A+ +FS +R + + D+ +LL++C L +L + +H
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA 432
Query: 273 VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGT 331
+ G N ++++L+ +YSK G + ++ K F +IS K VA AM+ GYA HG G
Sbjct: 433 LATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQ 492
Query: 332 EAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCM 391
++ F + + ++ DHVTFT +L+ACSH+GL+ EG +M VY +QPR++HY+
Sbjct: 493 VSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAA 552
Query: 392 VDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDP 451
VDLLGR GL+N AKELI++MP P+ V LG R I + + A +L+ ++P D
Sbjct: 553 VDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDH 612
Query: 452 RNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSD 511
Y+ LS++YS W + A V+ +MK + + + PG S+IE N++ F +D S+P
Sbjct: 613 FTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQ 672
Query: 512 KIHKKLEEVMSKIQ 525
I+ ++++ ++Q
Sbjct: 673 DIYMMIKDLTQEMQ 686
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 152/300 (50%), Gaps = 9/300 (3%)
Query: 66 VIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRG 125
+ H IK D ++ ++++ Y+ G A +LFDEMP +D VSWN+++SG++ G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 126 DLGNCMSVFSVMK---SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQV 182
L + +F+ MK SD+D +F ++ A K + G+ VH +K G E V
Sbjct: 81 KLEDAWCLFTCMKRSGSDVD----GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 183 KVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLN 242
V ++L++MY K V+ AF+ F ++E N VSWN+++A Q A +M +
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 243 GLFP-DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNA 301
D T LL + L++ VH + GL ITI +++ Y+ G ++
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSD 256
Query: 302 SCKVFAEI-SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
+ +VF + D ++ +M++G++ H A + F + R +E D T+T LLSACS
Sbjct: 257 AKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 149/303 (49%), Gaps = 14/303 (4%)
Query: 169 VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGR 228
HC A+K G + V N +++ Y KFGF+ A LF M +++ VSWN+M++ T G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 229 PNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTT 288
+A F+ M+ +G D + LL+ ++ L E VHG++ G + N+ + ++
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 289 LLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYA-MHGCGTEAIQFFERTIREGMEP 347
L+++Y+K R+ + + F EIS+P+ V+ A+++G+ + T ++ +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 348 DHVTFTHLLSACSHSGLVDEGKHYFQVMSDV--YGVQPRLDHYSCMVDLLGRCGLLNDAK 405
D TF LL+ + K QV + V G+Q + + M+ CG ++DAK
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLK---QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 406 ELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASG 465
+ + + W +++ + + + A E I + R+++ ++IY+ +G
Sbjct: 259 RVFDGLGGSKDLISWNSMIAG---FSKHELKESAFELFIQMQ----RHWVE-TDIYTYTG 310
Query: 466 LWS 468
L S
Sbjct: 311 LLS 313
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 291 bits (745), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 273/481 (56%), Gaps = 10/481 (2%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P V TL+ + SL +HA I+ + + +S Y G A+L+
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 103 FDEMPNKD--FVSWNSLVSGFSKRGDLGNCMSVFSVM-KSDLDLELNELTFISVISACAL 159
F+ + D VSWNS+ +S G+ + ++ +M + + +L+ TFI++ ++C
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS--TFINLAASCQN 268
Query: 160 AKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSM 219
+ +G+ +H A+ LG + ++ +NT I+MY K SA LF MT + VSW M
Sbjct: 269 PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 328
Query: 220 VAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACE---TLHLRRLVEAVHGVIFT 276
++ + G +EA+ F M +G PD T++SL+ C +L + ++A I+
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA-RADIYG 387
Query: 277 CGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQF 336
C D N+ I L+++YSK G ++ + +F + V T M++GYA++G EA++
Sbjct: 388 CKRD-NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKL 446
Query: 337 FERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLG 396
F + I +P+H+TF +L AC+HSG +++G YF +M VY + P LDHYSCMVDLLG
Sbjct: 447 FSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLG 506
Query: 397 RCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIM 456
R G L +A ELI+NM +P++G+WGALL A +++ N+ I ++AAE+L L+P Y+
Sbjct: 507 RKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVE 566
Query: 457 LSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKK 516
++NIY+A+G+W A++R++MK + + + PG S I+ K H F V ++ H +++ I+
Sbjct: 567 MANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFT 626
Query: 517 L 517
L
Sbjct: 627 L 627
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 199/371 (53%), Gaps = 14/371 (3%)
Query: 63 CCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFS 122
CC ++HA +IKS + D F+G V ++ + A +F+ MP +D +WN+++SGF
Sbjct: 70 CCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFC 129
Query: 123 KRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQV 182
+ G S+F M+ + ++ + +T +++I + + K+ + + +H ++LG+++QV
Sbjct: 130 QSGHTDKAFSLFREMRLN-EITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV 188
Query: 183 KVVNTLINMYGKFGFVDSAFKLFWAMT--EQNMVSWNSMVAVCTQNGRPNEAINYFSMMR 240
V NT I+ YGK G +DSA +F A+ ++ +VSWNSM + G +A + +M
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLML 248
Query: 241 LNGLFPDEATMVSLLQAC---ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
PD +T ++L +C ETL RL +H G D++I + T +++YSK
Sbjct: 249 REEFKPDLSTFINLAASCQNPETLTQGRL---IHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 298 RLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLS 357
++ +F ++ V+ T M+SGYA G EA+ F I+ G +PD VT L+S
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 358 ACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC--MVDLLGRCGLLNDAKELIKNMPFEP 415
C G ++ GK + +D+YG + R + C ++D+ +CG +++A+++ N P E
Sbjct: 366 GCGKFGSLETGK-WIDARADIYGCK-RDNVMICNALIDMYSKCGSIHEARDIFDNTP-EK 422
Query: 416 NSGVWGALLGA 426
W ++
Sbjct: 423 TVVTWTTMIAG 433
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 130/259 (50%), Gaps = 3/259 (1%)
Query: 113 SWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCC 172
+WN + R D + +F MK E N TF V ACA + VH
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRG-GFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 173 AVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEA 232
+K V V ++M+ K VD A K+F M E++ +WN+M++ Q+G ++A
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 233 INYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNL 292
+ F MRLN + PD T+++L+Q+ +L+EA+H V G+D +T+ T ++
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 293 YSKIGRLNASCKVFAEISKPDK--VACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHV 350
Y K G L+++ VF I + D+ V+ +M Y++ G +A + +RE +PD
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 351 TFTHLLSACSHSGLVDEGK 369
TF +L ++C + + +G+
Sbjct: 258 TFINLAASCQNPETLTQGR 276
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 291/521 (55%), Gaps = 18/521 (3%)
Query: 36 FHSI---STYPRDPLVSTLLVALKSSSSLYCCRVIHARVIK-----SLDYRDGFIGDQLV 87
FH + T P + +S++L + ++ L ++H V+K SL Y D + +
Sbjct: 99 FHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSL-YVDNAMMNMYA 157
Query: 88 SCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNE 147
+C + M A A L+F ++ K+ V+W +L++GF+ GD + ++ M + + E+
Sbjct: 158 TCSVTMEA---ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLE-NAEVTP 213
Query: 148 LTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWA 207
+ A A + G+ +H +K G + + V+N+++++Y + G++ A F
Sbjct: 214 YCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHE 273
Query: 208 MTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLV 267
M ++++++WN++++ + +EA+ F G P+ T SL+ AC +
Sbjct: 274 MEDKDLITWNTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCG 332
Query: 268 EAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI-SKPDKVACTAMLSGYAM 326
+ +HG IF G ++N+ + L+++Y+K G + S +VF EI + + V+ T+M+ GY
Sbjct: 333 QQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGS 392
Query: 327 HGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLD 386
HG G EA++ F++ + G+ PD + F +LSAC H+GLV++G YF VM YG+ P D
Sbjct: 393 HGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRD 452
Query: 387 HYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVY-HNISIGKEAAENLIA 445
Y+C+VDLLGR G + +A EL++ MPF+P+ WGA+LGA + + HN I + AA ++
Sbjct: 453 IYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVME 512
Query: 446 LDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDY 505
L P Y+MLS IY+A G W D A+VR +M+ + G S+I N++ F V D
Sbjct: 513 LKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDK 572
Query: 506 SHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKT 546
P++ ++ L ++ + +E G+V E +S+++D +E+ T
Sbjct: 573 MCPNASSVYSVLGLLIEETREAGYVPELDSLVND--QEVGT 611
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 167/363 (46%), Gaps = 11/363 (3%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
+ L+ Y G +A+ LFDEMP++D V+W ++++G++ F M
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ- 105
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGF-VDS 200
NE T SV+ +C K G VH VKLGME + V N ++NMY +++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 201 AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACET 260
A +F + +N V+W +++ T G + + M L + ++A +
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 261 LHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAM 320
+ + +H + G N+ ++ ++L+LY + G L+ + F E+ D + +
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 321 LSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVY- 379
+S +EA+ F+R +G P+ TFT L++AC++ ++ G+ Q+ ++
Sbjct: 286 ISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQ---QLHGRIFR 341
Query: 380 -GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKE 438
G ++ + ++D+ +CG + D++ + + N W +++ Y + G E
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIG---YGSHGYGAE 398
Query: 439 AAE 441
A E
Sbjct: 399 AVE 401
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 35 RFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMG 94
RF S P ++L+ A + ++L C + +H R+ + ++ + + L+ Y G
Sbjct: 303 RFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCG 362
Query: 95 ATPDAQLLFDEMPN-KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
PD+Q +F E+ + ++ VSW S++ G+ G + +F M S + + + F++V
Sbjct: 363 NIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS-GIRPDRIVFMAV 421
Query: 154 ISACALAKAREEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQ 211
+SAC A E+G +Y + + G+ + N ++++ G+ G + A++L M +
Sbjct: 422 LSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKP 481
Query: 212 NMVSWNSMVAVC 223
+ +W +++ C
Sbjct: 482 DESTWGAILGAC 493
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 270/483 (55%), Gaps = 25/483 (5%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
I+ IKS D + + + Y A +A +FDEM +D VSWN++++ + G
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 127 LGNCMSVF-SVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVV 185
+ +F S+++S + E +E TF S++ AC + G +H VK GM V
Sbjct: 464 GYETLFLFVSMLRSRI--EPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 186 NTLINMYGKFGFVDSAFKL---FW-------AMTE---------QNM-VSWNSMVAVCTQ 225
+LI+MY K G ++ A K+ F+ M E Q M VSWNS+++
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
+ +A F+ M G+ PD+ T ++L C L L + +H + L ++ I
Sbjct: 581 KEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYI 640
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
+TL+++YSK G L+ S +F + + D V AM+ GYA HG G EAIQ FER I E +
Sbjct: 641 CSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI 700
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
+P+HVTF +L AC+H GL+D+G YF +M YG+ P+L HYS MVD+LG+ G + A
Sbjct: 701 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 760
Query: 406 ELIKNMPFEPNSGVWGALLGASRVY-HNISIGKEAAENLIALDPSDPRNYIMLSNIYSAS 464
ELI+ MPFE + +W LLG ++ +N+ + +EA L+ LDP D Y +LSN+Y+ +
Sbjct: 761 ELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADA 820
Query: 465 GLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKI 524
G+W + +R M+ L + PGCS++E +++H F+V D +HP ++I+++L + S++
Sbjct: 821 GMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEM 880
Query: 525 QEF 527
+ F
Sbjct: 881 KPF 883
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 192/395 (48%), Gaps = 31/395 (7%)
Query: 55 LKSSSSLYCCRV---IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDF 111
L+S ++L R+ +HA +KS DG + + Y DAQ+LFD N +
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 112 VSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHC 171
S+N++++G+S+ + +F + S L +E++ V ACAL K EG ++
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRLMSS-GLGFDEISLSGVFRACALVKGLSEGLQIYG 406
Query: 172 CAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNE 231
A+K + L V V N I+MYGK + AF++F M ++ VSWN+++A QNG+ E
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466
Query: 232 AINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLN 291
+ F M + + PDE T S+L+AC L +E +H I G+ N ++ +L++
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGME-IHSSIVKSGMASNSSVGCSLID 525
Query: 292 LYSKIGRLNASCKVFAEISKPDKVACT--------------------AMLSGYAMHGCGT 331
+YSK G + + K+ + + V+ T +++SGY M
Sbjct: 526 MYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 585
Query: 332 EAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC- 390
+A F R + G+ PD T+ +L C++ GK Q+ + V + + D Y C
Sbjct: 586 DAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK---QIHAQVIKKELQSDVYICS 642
Query: 391 -MVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+VD+ +CG L+D++ L+ + W A++
Sbjct: 643 TLVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNAMI 676
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 169/362 (46%), Gaps = 15/362 (4%)
Query: 71 VIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNC 130
V + RD +++++ Y A F+ MP +D VSWNS++SG+ + G+
Sbjct: 105 VFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKS 164
Query: 131 MSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLIN 190
+ VF M + +E + TF ++ C+ + G +H V++G + V + L++
Sbjct: 165 IEVFVDMGRE-GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLD 223
Query: 191 MYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
MY K + ++F + E+N VSW++++A C QN + A+ +F M+ ++
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 251 MVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
S+L++C L RL +H + + T L++Y+K + + +F
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 311 KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKH 370
++ + AM++GY+ G +A+ F R + G+ D ++ + + AC+ + EG
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 371 YFQVMSDVYG--VQPRLDHYSCM----VDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+YG ++ L C+ +D+ G+C L +A + M ++ W A++
Sbjct: 404 -------IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAII 455
Query: 425 GA 426
A
Sbjct: 456 AA 457
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 161/344 (46%), Gaps = 9/344 (2%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
IH V++ D L+ Y ++ +F +P K+ VSW+++++G +
Sbjct: 202 IHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNL 261
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISAC-ALAKAREEGQYVHCCAVKLGMELQVKVV 185
L + F M+ ++ +++ + SV+ +C AL++ R GQ +H A+K V
Sbjct: 262 LSLALKFFKEMQK-VNAGVSQSIYASVLRSCAALSELRLGGQ-LHAHALKSDFAADGIVR 319
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
++MY K + A LF N S+N+M+ +Q +A+ F + +GL
Sbjct: 320 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 379
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
DE ++ + +AC + ++G+ L ++ + +++Y K L + +V
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 439
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
F E+ + D V+ A+++ + +G G E + F +R +EPD TF +L AC+ L
Sbjct: 440 FDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL- 498
Query: 366 DEGKHYFQVMSDVY--GVQPRLDHYSCMVDLLGRCGLLNDAKEL 407
+ ++ S + G+ ++D+ +CG++ +A+++
Sbjct: 499 ---GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 114/224 (50%), Gaps = 4/224 (1%)
Query: 34 VRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNM 93
R + P +T+L + +S + IHA+VIK D +I LV Y
Sbjct: 592 TRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKC 651
Query: 94 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
G D++L+F++ +DFV+WN+++ G++ G + +F M + +++ N +TFIS+
Sbjct: 652 GDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE-NIKPNHVTFISI 710
Query: 154 ISACALAKAREEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQ 211
+ ACA ++G +Y + G++ Q+ + ++++ GK G V A +L M E
Sbjct: 711 LRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA 770
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
+ V W +++ VCT + R N + + L L P +++ +LL
Sbjct: 771 DDVIWRTLLGVCTIH-RNNVEVAEEATAALLRLDPQDSSAYTLL 813
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 277/509 (54%), Gaps = 13/509 (2%)
Query: 45 DPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIG-----DQLVSCYLNMGATPDA 99
D + + +L +L ++ + R IH IK +G +G + LV+ Y + +A
Sbjct: 221 DYVFTAVLSSLAATIYVGLGRQIHCITIK-----NGLLGFVALSNALVTMYSKCESLNEA 275
Query: 100 QLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACAL 159
+FD +++ ++W+++V+G+S+ G+ + +FS M S ++ +E T + V++AC+
Sbjct: 276 CKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS-AGIKPSEYTIVGVLNACSD 334
Query: 160 AKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSM 219
EEG+ +H +KLG E + L++MY K G + A K F + E+++ W S+
Sbjct: 335 ICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSL 394
Query: 220 VAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL 279
++ QN EA+ + M+ G+ P++ TM S+L+AC +L L + VHG G
Sbjct: 395 ISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGF 454
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFER 339
+ I + L +YSK G L VF D V+ AM+SG + +G G EA++ FE
Sbjct: 455 GLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEE 514
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
+ EGMEPD VTF +++SACSH G V+ G YF +MSD G+ P++DHY+CMVDLL R G
Sbjct: 515 MLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAG 574
Query: 400 LLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSN 459
L +AKE I++ + +W LL A + + +G A E L+AL + Y+ LS
Sbjct: 575 QLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSG 634
Query: 460 IYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEE 519
IY+A G D +V M+ +++ GCS+IE N+ H FVV D HP ++ +
Sbjct: 635 IYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCL 694
Query: 520 VMSKIQEFGFVSETESILHDVAEEIKTNM 548
V ++ E GFV+ +S V EE T +
Sbjct: 695 VSRQMIEEGFVTVLDSSF--VEEEEGTQL 721
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 209/428 (48%), Gaps = 20/428 (4%)
Query: 46 PLVSTLLVALKSSSSLYCC---RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P TL K+ SSL R HA V+K + D ++ LV Y G D +
Sbjct: 116 PNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKV 175
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSV-MKSDLDLELNELTFISVISACALAK 161
F MP ++ +W+++VSG++ RG + + VF++ ++ + ++ F +V+S+ A
Sbjct: 176 FAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATI 235
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
G+ +HC +K G+ V + N L+ MY K ++ A K+F + ++N ++W++MV
Sbjct: 236 YVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 295
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
+QNG EA+ FS M G+ P E T+V +L AC + + +H + G +
Sbjct: 296 GYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFER 355
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
++ T L+++Y+K G L + K F + + D T+++SGY + EA+ + R
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKH-YFQVMSDVYGVQPRLDHYSCMVDLLGRCGL 400
G+ P+ T +L ACS ++ GK + + +G++ + S + + +CG
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGS 473
Query: 401 LNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAA---ENLIA--LDPSDPRNYI 455
L D + + P + W A++ S + HN G EA E ++A ++P D +
Sbjct: 474 LEDGNLVFRRTP-NKDVVSWNAMI--SGLSHN-GQGDEALELFEEMLAEGMEPDD----V 525
Query: 456 MLSNIYSA 463
NI SA
Sbjct: 526 TFVNIISA 533
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 188/389 (48%), Gaps = 13/389 (3%)
Query: 45 DPLVSTLLVALKSSS---SLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
+P STLL L S +L R +H ++I++ + LV+ Y G A
Sbjct: 11 NPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHS 70
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGN---CMSVFSVMKSDLDLELNELTFISVISACA 158
+F+ + KD VSWNSL++G+S+ G + + M +F M++ D+ N T + A +
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ-DILPNAYTLAGIFKAES 129
Query: 159 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNS 218
++ G+ H VK+ + V +L+ MY K G V+ K+F M E+N +W++
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 219 MVAVCTQNGRPNEAINYFSMM---RLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
MV+ GR EAI F++ + G D L T+++ L +H +
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYV-GLGRQIHCITI 248
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
GL + + L+ +YSK LN +CK+F + + +AM++GY+ +G EA++
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
F R G++P T +L+ACS ++EGK + + G + L + +VD+
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMY 367
Query: 396 GRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+ G L DA++ + E + +W +L+
Sbjct: 368 AKAGCLADARKGFDCLQ-ERDVALWTSLI 395
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 140/302 (46%), Gaps = 15/302 (4%)
Query: 35 RFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMG 94
R S P + + +L A L + +H+ ++K R F LV Y G
Sbjct: 312 RMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAG 371
Query: 95 ATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVI 154
DA+ FD + +D W SL+SG+ + D + ++ MK+ + N+ T SV+
Sbjct: 372 CLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT-AGIIPNDPTMASVL 430
Query: 155 SACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMV 214
AC+ E G+ VH +K G L+V + + L MY K G ++ +F +++V
Sbjct: 431 KACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 490
Query: 215 SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVI 274
SWN+M++ + NG+ +EA+ F M G+ PD+ T V+++ AC + VE G
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH---KGFVE--RGWF 545
Query: 275 F------TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVAC--TAMLSGYAM 326
+ GLD + +++L S+ G+L + K F E + D C +LS
Sbjct: 546 YFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA-KEFIESANIDHGLCLWRILLSACKN 604
Query: 327 HG 328
HG
Sbjct: 605 HG 606
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 243/415 (58%), Gaps = 5/415 (1%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
+ + LV+ YL G +A+ +FD M +D ++W +++G+++ GD+ N + + +M+ +
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE- 313
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
+ N +T S++S C A +G+ +H AV+ + + + +LI+MY K VD
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 202 FKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL 261
F++F ++ + W++++A C QN ++A+ F MR + P+ AT+ SLL A L
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL 433
Query: 262 HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKP----DKVAC 317
R +H + G ++ T L+++YSK G L ++ K+F I + D V
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 318 TAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSD 377
A++SGY MHG G A+Q F +R G+ P+ +TFT L+ACSHSGLV+EG F+ M +
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
Query: 378 VYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGK 437
Y R +HY+C+VDLLGR G L++A LI +PFEP S VWGALL A + N+ +G+
Sbjct: 554 HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGE 613
Query: 438 EAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIE 492
AA L L+P + NY++L+NIY+A G W D KVR++M+ L + PG S IE
Sbjct: 614 MAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIE 668
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 159/334 (47%), Gaps = 4/334 (1%)
Query: 49 STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPN 108
+LL ++ S+ + +H VI G I L Y G A+ LF+EMP
Sbjct: 19 QSLLNHFAATQSISKTKALHCHVITG-GRVSGHILSTLSVTYALCGHITYARKLFEEMPQ 77
Query: 109 KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD-LDLELNELTFISVISACALAKAREEGQ 167
+S+N ++ + + G + +SVF M S+ + + T+ V A K+ + G
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 168 YVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNG 227
VH ++ V N L+ MY FG V+ A +F M ++++SWN+M++ +NG
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 228 RPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVT 287
N+A+ F M + D AT+VS+L C L + VH ++ L + I +
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 288 TLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
L+N+Y K GR++ + VF + + D + T M++GY G A++ EG+ P
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRP 317
Query: 348 DHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVY 379
+ VT L+S C + V++GK H + V VY
Sbjct: 318 NAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY 351
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 254/456 (55%), Gaps = 3/456 (0%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
HA ++K D F+ + L+S Y + G A LFD +KD V+W +++ GF + G
Sbjct: 125 FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS 184
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLG-MELQVKVV 185
M F MK + NE+T +SV+ A + G+ VH ++ G ++ V +
Sbjct: 185 ASEAMVYFVEMKKT-GVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
++L++MYGK D A K+F M +N+V+W +++A Q+ ++ + F M + +
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
P+E T+ S+L AC + VH + ++ N T TTL++LY K G L + V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
F + + + TAM++G+A HG +A F + + P+ VTF +LSAC+H GLV
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 366 DEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLG 425
+EG+ F M + ++P+ DHY+CMVDL GR GLL +AK LI+ MP EP + VWGAL G
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 426 ASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARN 485
+ ++ + +GK AA +I L PS Y +L+N+YS S W + A+VR MK + + ++
Sbjct: 484 SCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKS 543
Query: 486 PGCSFIEHGNKIHRFVVDDYSHP-DSDKIHKKLEEV 520
PG S+IE K+ F+ D P +SD ++K L+ V
Sbjct: 544 PGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 5/215 (2%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + +S++L A +L+ R +H +IK+ + G L+ Y+ G +A L+
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F+ + K+ +W ++++GF+ G + +F M S + NE+TF++V+SACA
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS-HVSPNEVTFMAVLSACAHGGL 422
Query: 163 REEGQYVHCCAV-KLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSMV 220
EEG+ + + ME + +++++G+ G ++ A L M E V W ++
Sbjct: 423 VEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
C + + + ++ R+ L P + +LL
Sbjct: 483 GSCLLH--KDYELGKYAASRVIKLQPSHSGRYTLL 515
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/478 (31%), Positives = 271/478 (56%), Gaps = 2/478 (0%)
Query: 48 VSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP 107
+++++ A S+L +HA VIK + +G+ L+ Y T F M
Sbjct: 389 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH 448
Query: 108 NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQ 167
+KD +SW ++++G+++ + +F + +E++E+ S++ A ++ K+ +
Sbjct: 449 DKDLISWTTVIAGYAQNDCHVEALELFRDVAKK-RMEIDEMILGSILRASSVLKSMLIVK 507
Query: 168 YVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNG 227
+HC ++ G+ L + N L+++YGK + A ++F ++ +++VSW SM++ NG
Sbjct: 508 EIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG 566
Query: 228 RPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVT 287
+EA+ F M GL D ++ +L A +L +H + G +I
Sbjct: 567 NESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV 626
Query: 288 TLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
++++Y+ G L ++ VF I + + T+M++ Y MHGCG A++ F++ E + P
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 686
Query: 348 DHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL 407
DH++F LL ACSH+GL+DEG+ + ++M Y ++P +HY C+VD+LGR + +A E
Sbjct: 687 DHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEF 746
Query: 408 IKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLW 467
+K M EP + VW ALL A R + IG+ AA+ L+ L+P +P N +++SN+++ G W
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 806
Query: 468 SDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQ 525
+D KVRA MK + ++PGCS+IE K+H+F D SHP+S +I++KL EV K++
Sbjct: 807 NDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 174/340 (51%), Gaps = 7/340 (2%)
Query: 65 RVIHARVIKSL-DYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSK 123
R +H+R+ K+ + F+ +LV Y G+ DA+ +FDEMP++ +WN+++ +
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 124 RGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVK 183
G+ + ++++ M+ + + L +F +++ ACA + G +H VKLG
Sbjct: 160 NGEPASALALYWNMRVE-GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQ-NMVSWNSMVAVCTQNGRPNEAINYFSMMRLN 242
+VN L++MY K + +A +LF E+ + V WNS+++ + +G+ E + F M +
Sbjct: 219 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 278
Query: 243 GLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL-DENITIVTTLLNLYSKIGRLNA 301
G P+ T+VS L AC+ +L + +H + + + L+ +Y++ G++
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338
Query: 302 SCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSH 361
+ ++ +++ D V +++ GY + EA++FF I G + D V+ T +++A
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Query: 362 -SGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGL 400
S L+ + + V+ +G L + ++D+ +C L
Sbjct: 399 LSNLLAGMELHAYVIK--HGWDSNLQVGNTLIDMYSKCNL 436
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 154/322 (47%), Gaps = 13/322 (4%)
Query: 37 HSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYR-DGFIGDQLVSCYLNMGA 95
H P + + L A S + IHA V+KS + + ++ + L++ Y G
Sbjct: 276 HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGK 335
Query: 96 TPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM-----KSDLDLELNELTF 150
P A+ + +M N D V+WNSL+ G+ + + FS M KSD E++
Sbjct: 336 MPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD------EVSM 389
Query: 151 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE 210
S+I+A G +H +K G + ++V NTLI+MY K + F M +
Sbjct: 390 TSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 449
Query: 211 QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAV 270
++++SW +++A QN EA+ F + + DE + S+L+A L +V+ +
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 271 HGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCG 330
H I GL + + I L+++Y K + + +VF I D V+ T+M+S A++G
Sbjct: 510 HCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 331 TEAIQFFERTIREGMEPDHVTF 352
+EA++ F R + G+ D V
Sbjct: 569 SEAVELFRRMVETGLSADSVAL 590
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 147/326 (45%), Gaps = 11/326 (3%)
Query: 149 TFISVISACALAKAREEGQYVHCCAVKLGMELQVK-VVNTLINMYGKFGFVDSAFKLFWA 207
F V+ C +A +G+ +H K ++ + L+ MYGK G +D A K+F
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 208 MTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLV 267
M ++ +WN+M+ NG P A+ + MR+ G+ ++ +LL+AC L R
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 268 EAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAM 326
+H ++ G IV L+++Y+K L+A+ ++F K D V ++LS Y+
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 327 HGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLD 386
G E ++ F G P+ T L+AC GK + L
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 387 HYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAE---NL 443
+ ++ + RCG + A+ +++ M + W +L+ + Y + KEA E ++
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI---KGYVQNLMYKEALEFFSDM 377
Query: 444 IALDPSDPRNYIMLSNIYSASGLWSD 469
IA + + +++I +ASG S+
Sbjct: 378 IA--AGHKSDEVSMTSIIAASGRLSN 401
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/588 (29%), Positives = 309/588 (52%), Gaps = 17/588 (2%)
Query: 32 TSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGF-IGDQLVSCY 90
T + S+ P + S +L + SL + IH++ IK + + D +G+ LV Y
Sbjct: 312 TFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK-VGFEDSTDVGNALVDMY 370
Query: 91 LNMGATP-DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELT 149
+ A+ +A +F M + + VSW +L+ G G + +C + M ++E N +T
Sbjct: 371 MKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR-EVEPNVVT 429
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
V+ AC+ + +H ++ ++ ++ V N+L++ Y VD A+ + +M
Sbjct: 430 LSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK 489
Query: 210 EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA 269
++ +++ S+V + G+ A++ + M +G+ D+ ++ + A L +
Sbjct: 490 RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKH 549
Query: 270 VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC 329
+H G +++ +L+++YSK G L + KVF EI+ PD V+ ++SG A +G
Sbjct: 550 LHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGF 609
Query: 330 GTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS 389
+ A+ FE + EPD VTF LLSACS+ L D G YFQVM +Y ++P+++HY
Sbjct: 610 ISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYV 669
Query: 390 CMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPS 449
+V +LGR G L +A +++ M +PN+ ++ LL A R N+S+G++ A +AL PS
Sbjct: 670 HLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPS 729
Query: 450 DPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPD 509
DP YI+L+++Y SG A K R LM K L++ G S +E K+H FV +D + D
Sbjct: 730 DPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVD 789
Query: 510 -SDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAAD 568
++ I+ ++E + +I+ FG + + HS K A+ YG + ++ +
Sbjct: 790 KTNGIYAEIESIKEEIKRFG------------SPYRGNENASFHSAKQAVVYGFIYASPE 837
Query: 569 MPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSC 616
P+ ++KN +C+DCH+ ++ + + I +RD + H F +G CSC
Sbjct: 838 APVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 173/361 (47%), Gaps = 8/361 (2%)
Query: 64 CRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSK 123
C VI ++++LD + + L+S YL +A+ LFDEM ++ +W ++S F+K
Sbjct: 47 CPVIKFGLLENLD-----LCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 124 RGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVK 183
+ + +S+F M + NE TF SV+ +CA + G VH +K G E
Sbjct: 102 SQEFASALSLFEEMMAS-GTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG 243
V ++L ++Y K G A +LF ++ + +SW M++ + EA+ ++S M G
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 244 LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
+ P+E T V LL A L L + +H I G+ N+ + T+L++ YS+ ++ +
Sbjct: 221 VPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
+V + D T+++SG+ + EA+ F G++P++ T++ +LS CS
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGAL 423
+D GK V G + D + +VD+ +C + PN W L
Sbjct: 340 SLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTL 398
Query: 424 L 424
+
Sbjct: 399 I 399
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 160/326 (49%), Gaps = 12/326 (3%)
Query: 151 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE 210
I ++S C +R G ++HC +K G+ + + N L+++Y K + +A KLF M+
Sbjct: 28 IRILSFCESNSSRI-GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 211 QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAV 270
+ + +W M++ T++ A++ F M +G P+E T S++++C L V
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146
Query: 271 HGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCG 330
HG + G + N + ++L +LYSK G+ +C++F+ + D ++ T M+S
Sbjct: 147 HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKW 206
Query: 331 TEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC 390
EA+QF+ ++ G+ P+ TF LL A S GL + ++ V G+ + +
Sbjct: 207 REALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNII--VRGIPLNVVLKTS 264
Query: 391 MVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSD 450
+VD + + DA ++ N E + +W +++ S N+ KEA + +
Sbjct: 265 LVDFYSQFSKMEDAVRVL-NSSGEQDVFLWTSVV--SGFVRNLR-AKEAVGTFLEM---- 316
Query: 451 PRNYIMLSNIYSASGLWSDAAKVRAL 476
R+ + N ++ S + S + VR+L
Sbjct: 317 -RSLGLQPNNFTYSAILSLCSAVRSL 341
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/535 (31%), Positives = 283/535 (52%), Gaps = 44/535 (8%)
Query: 35 RFHSISTYPR-DPLVSTLLVALKSSSSLYCCRVIHA-RVIKSLDYRDGFIGDQLVSCYLN 92
R I+ + R + L+S L+ + + C + I A +V + R+ + + +VS Y+
Sbjct: 70 RHLKITGFKRPNTLLSNHLIGM----YMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVK 125
Query: 93 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 152
G A+++FD MP +D VSWN++V G+++ G+L + + + ++ NE +F
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS-GIKFNEFSFAG 184
Query: 153 VISACALAKAREEGQYVH--------------CCAV-----KLGM---------ELQVK- 183
+++AC ++ + + H C++ K G E+ VK
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 184 --VVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRL 241
+ TLI+ Y K G +++A KLF M E+N VSW +++A + G N A++ F M
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 242 NGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNA 301
G+ P++ T S L A ++ R + +HG + + N ++++L+++YSK G L A
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEA 364
Query: 302 SCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
S +VF K D V M+S A HG G +A++ + I+ ++P+ T +L+ACS
Sbjct: 365 SERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS 424
Query: 361 HSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVW 420
HSGLV+EG +F+ M+ +G+ P +HY+C++DLLGR G + I+ MPFEP+ +W
Sbjct: 425 HSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIW 484
Query: 421 GALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTK 480
A+LG R++ N +GK+AA+ LI LDP YI+LS+IY+ G W K+R +MK +
Sbjct: 485 NAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKR 544
Query: 481 VLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETES 535
+ + S+IE K+ F V D SH H + EE+ + V E E+
Sbjct: 545 RVNKEKAVSWIEIEKKVEAFTVSDGSHA-----HARKEEIYFILHNLAAVIEEEA 594
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 278/496 (56%), Gaps = 8/496 (1%)
Query: 36 FHSISTYPRDPLV---STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLN 92
F S+S + P + S++L + S +L +HA IK+ D ++ + L+ Y
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAK 397
Query: 93 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRG---DLGNCMSVFSVMKSDLDLELNELT 149
DA+ +FD D V +N+++ G+S+ G +L +++F M+ L + + LT
Sbjct: 398 CDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL-IRPSLLT 456
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
F+S++ A A + + +H K G+ L + + LI++Y + + +F M
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 210 EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA 269
+++V WNSM A Q EA+N F ++L+ PDE T +++ A L +L +
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 270 VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC 329
H + GL+ N I LL++Y+K G + K F + D V +++S YA HG
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 330 GTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS 389
G +A+Q E+ + EG+EP+++TF +LSACSH+GLV++G F++M +G++P +HY
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYV 695
Query: 390 CMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPS 449
CMV LLGR G LN A+ELI+ MP +P + VW +LL N+ + + AAE I DP
Sbjct: 696 CMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPK 755
Query: 450 DPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPD 509
D ++ MLSNIY++ G+W++A KVR MK + + + PG S+I ++H F+ D SH
Sbjct: 756 DSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCK 815
Query: 510 SDKIHKKLEEVMSKIQ 525
+++I++ L++++ +I+
Sbjct: 816 ANQIYEVLDDLLVQIR 831
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 192/403 (47%), Gaps = 10/403 (2%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+ + ++KS RD ++G L+ YL G A+L+FD +P K V+W +++SG K G
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ +F + D ++ + +V+SAC++ E G+ +H ++ G+E+ ++N
Sbjct: 230 SYVSLQLFYQLMED-NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
LI+ Y K G V +A KLF M +N++SW ++++ QN EA+ F+ M GL P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 247 DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF 306
D S+L +C +LH VH L + + +L+++Y+K L + KVF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 307 AEISKPDKVACTAMLSGYAMHGCGT---EAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
+ D V AM+ GY+ G EA+ F + P +TF LL A +
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGAL 423
+ K +M YG+ + S ++D+ C L D++ + M + + +W ++
Sbjct: 469 SLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSM 526
Query: 424 LGASRVYHNISIGKEAAENLIALDPSDPR-NYIMLSNIYSASG 465
Y S +EA + L S R + +N+ +A+G
Sbjct: 527 FAG---YVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 209/444 (47%), Gaps = 17/444 (3%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P ++ST+L A L + IHA +++ D + + L+ Y+ G A L
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKL 306
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F+ MPNK+ +SW +L+SG+ + M +F+ M S L+ + S++++CA A
Sbjct: 307 FNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILTSCASLHA 365
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
G VH +K + V N+LI+MY K + A K+F ++V +N+M+
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 223 CTQNGRP---NEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL 279
++ G +EA+N F MR + P T VSLL+A +L L + +HG++F GL
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFER 339
+ +I + L+++YS L S VF E+ D V +M +GY EA+ F
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE 545
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYF-QVMSDVYGVQPRLDHYSCMVDLLGRC 398
PD TF ++++A + V G+ + Q++ P + + ++D+ +C
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKC 603
Query: 399 GLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIAL--DPSDPRNYIM 456
G DA + + + W +++ + Y N GK+A + L + + +P NYI
Sbjct: 604 GSPEDAHKAFDSAA-SRDVVCWNSVISS---YANHGEGKKALQMLEKMMSEGIEP-NYIT 658
Query: 457 LSNIYSA---SGLWSDAAKVRALM 477
+ SA +GL D K LM
Sbjct: 659 FVGVLSACSHAGLVEDGLKQFELM 682
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 180/366 (49%), Gaps = 16/366 (4%)
Query: 52 LVALKSSSSL-YCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKD 110
L+ L++S L + V+H ++I D ++ + L++ Y G A+ +F++MP ++
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109
Query: 111 FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQY-- 168
VSW+++VS + G + VF NE S I AC+ R G++
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR--GRWMV 167
Query: 169 --VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
+ VK G + V V LI+ Y K G +D A +F A+ E++ V+W +M++ C +
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM 227
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIV 286
GR ++ F + + + PD + ++L AC L + +H I GL+ + +++
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 287 TTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGME 346
L++ Y K GR+ A+ K+F + + ++ T +LSGY + EA++ F + G++
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 347 PDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRL--DHY--SCMVDLLGRCGLLN 402
PD + +L++C+ + F Y ++ L D Y + ++D+ +C L
Sbjct: 348 PDMYACSSILTSCASLHALG-----FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT 402
Query: 403 DAKELI 408
DA+++
Sbjct: 403 DARKVF 408
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 151/313 (48%), Gaps = 17/313 (5%)
Query: 169 VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGR 228
VH + G+EL + N LIN+Y + G + A K+F M E+N+VSW++MV+ C +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 229 PNEAINYF-SMMRLNGLFPDEATMVSLLQACETL--HLRRLVEAVHGVIFTCGLDENITI 285
E++ F R P+E + S +QAC L R +V + + G D ++ +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
T L++ Y K G ++ + VF + + V T M+SG G ++Q F + + + +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV--YGVQPRLDHYSCMVDLLGRCGLLND 403
PD + +LSACS ++ GK Q+ + + YG++ + ++D +CG +
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGK---QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 404 AKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSA 463
A +L MP N W LL Y ++ KEA E ++ + + ++Y+
Sbjct: 303 AHKLFNGMP-NKNIISWTTLLSG---YKQNALHKEAMELFTSMS-----KFGLKPDMYAC 353
Query: 464 SGLWSDAAKVRAL 476
S + + A + AL
Sbjct: 354 SSILTSCASLHAL 366
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 275 bits (703), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 148/473 (31%), Positives = 264/473 (55%), Gaps = 1/473 (0%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
++IHA I S ++ +G++L++ Y G + + +FD M +++ ++ +++SG +
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
+ + +FS+M+ L + N +T++S ++AC+ ++ EGQ +H K G+E ++ +
Sbjct: 235 ELHEDGLRLFSLMRRGL-VHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCI 293
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
+ L++MY K G ++ A+ +F + TE + VS ++ QNG EAI +F M G+
Sbjct: 294 ESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGV 353
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
D + ++L + L + +H ++ N + L+N+YSK G L S
Sbjct: 354 EIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQT 413
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
VF + K + V+ +M++ +A HG G A++ +E ++P VTF LL ACSH GL
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGL 473
Query: 365 VDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+D+G+ M +V+G++PR +HY+C++D+LGR GLL +AK I ++P +P+ +W ALL
Sbjct: 474 IDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533
Query: 425 GASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLAR 484
GA + + +G+ AAE L P +I+++NIYS+ G W + AK MK + +
Sbjct: 534 GACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTK 593
Query: 485 NPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESIL 537
G S IE +K H FVV+D HP ++ I+ L + + + G+ + IL
Sbjct: 594 ETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFIL 646
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 219/453 (48%), Gaps = 32/453 (7%)
Query: 22 LPTC-CTLLSETSVRF-----HSISTYPRDPLVSTLLVALKSSSSLY--CCRVIHARVIK 73
LP+C T+LS + + + +ST+ + + +LL+++ + +HA +IK
Sbjct: 14 LPSCLSTVLSPSKILIRQSPNYQVSTFLLNHVDMSLLLSICGREGWFPHLGPCLHASIIK 73
Query: 74 SLDYRDGFIGD----------QLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSK 123
+ ++ + D L+S Y G DA LFDEMP +D +S N + GF +
Sbjct: 74 NPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLR 133
Query: 124 RGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVK 183
+ + + M + LT V+S C + + +H A+ G + ++
Sbjct: 134 NRETESGFVLLKRMLGSGGFDHATLTI--VLSVCDTPEFCLVTKMIHALAILSGYDKEIS 191
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG 243
V N LI Y K G S +F M+ +N+++ ++++ +N + + FS+MR
Sbjct: 192 VGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGL 251
Query: 244 LFPDEATMVSLLQACETLHLRRLVEA--VHGVIFTCGLDENITIVTTLLNLYSKIGRLNA 301
+ P+ T +S L AC +R+VE +H +++ G++ + I + L+++YSK G +
Sbjct: 252 VHPNSVTYLSALAACSG--SQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIED 309
Query: 302 SCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSH 361
+ +F ++ D+V+ T +L G A +G EAIQFF R ++ G+E D + +L
Sbjct: 310 AWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFI 369
Query: 362 SGLVDEGKHYFQVMSDVYGVQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMPFEPNSGV 419
+ GK Q+ S V + + + + ++++ +CG L D++ + + MP + N
Sbjct: 370 DNSLGLGK---QLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVS 425
Query: 420 WGALLGA-SRVYHNISIGKEAAE-NLIALDPSD 450
W +++ A +R H ++ K E + + P+D
Sbjct: 426 WNSMIAAFARHGHGLAALKLYEEMTTLEVKPTD 458
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 47 LVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
+VS +L +SL + +H+ VIK + F+ + L++ Y G D+Q +F M
Sbjct: 359 VVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRM 418
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA----LAKA 162
P +++VSWNS+++ F++ G + ++ M + L+++ ++TF+S++ AC+ + K
Sbjct: 419 PKRNYVSWNSMIAAFARHGHGLAALKLYEEMTT-LEVKPTDVTFLSLLHACSHVGLIDKG 477
Query: 163 RE---EGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNS 218
RE E + VH G+E + + +I+M G+ G + A ++ + + W +
Sbjct: 478 RELLNEMKEVH------GIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQA 531
Query: 219 MVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
++ C+ +G + + ++ +L PD ++
Sbjct: 532 LLGACSFHG--DTEVGEYAAEQLFQTAPDSSS 561
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 276/527 (52%), Gaps = 45/527 (8%)
Query: 40 STYPRDPLVSTLLVALKSS--SSLYCCR------VIHARVIKSLDYRDGFIGDQLVSCYL 91
ST+ RDP +TL ++ + + S L C+ IHA++I++ +D F+ +L+
Sbjct: 13 STFRRDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS 72
Query: 92 NMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFI 151
+ + A +F + N + + +++ GF G + +S++ M + L N
Sbjct: 73 TLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDN-YVIT 131
Query: 152 SVISACALAKAREEGQYVHCCAVKLG-----------MELQVK---VVNT---------- 187
SV+ AC L RE +H +KLG ME+ K +VN
Sbjct: 132 SVLKACDLKVCRE----IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDR 187
Query: 188 -------LINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMR 240
+IN Y + GF+ A +LF + ++ V W +M+ +N N+A+ F M+
Sbjct: 188 DHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQ 247
Query: 241 LNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
+ + +E T V +L AC L L VH + ++ + + L+N+YS+ G +N
Sbjct: 248 MENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDIN 307
Query: 301 ASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
+ +VF + D ++ M+SG AMHG EAI F + G P+ VT LL+ACS
Sbjct: 308 EARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACS 367
Query: 361 HSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVW 420
H GL+D G F M V+ V+P+++HY C+VDLLGR G L +A I+N+P EP+ +
Sbjct: 368 HGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIML 427
Query: 421 GALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTK 480
G LL A +++ N+ +G++ A+ L + D Y++LSN+Y++SG W ++ ++R M+
Sbjct: 428 GTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDS 487
Query: 481 VLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEF 527
+ + PGCS IE N+IH F+V D +HP + I+++L+E +++I F
Sbjct: 488 GIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQE-LNRILRF 533
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/539 (30%), Positives = 268/539 (49%), Gaps = 75/539 (13%)
Query: 64 CRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSK 123
CR H +VI+ + + ++L++ Y G DA LF EMP ++ +SWN ++ GFS+
Sbjct: 177 CRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQ 236
Query: 124 RGDLGNCMSVFSVMKSDLDLELNELTFISVIS---------------------------- 155
D + + +F M+ + + + +E+T+ SV+S
Sbjct: 237 EYDCESAVKIFEWMQRE-EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE 295
Query: 156 -------ACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFV---------- 198
CA +A + VH +K G E + N LI++YGK G V
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355
Query: 199 ---------------------DSAFKLFWAMTEQN--------MVSWNSMVAVCTQNGRP 229
D A LF + E N +V+W S++ C GR
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415
Query: 230 NEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTL 289
++++ YF M+ + + + T+ +L C L L +HG + + ENI + L
Sbjct: 416 DDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNAL 475
Query: 290 LNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDH 349
+N+Y+K G L+ VF I D ++ +++ GY MHG +A+ F+R I G PD
Sbjct: 476 VNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG 535
Query: 350 VTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIK 409
+ +LSACSH+GLV++G+ F MS +G++P+ +HY+C+VDLLGR G L +A E++K
Sbjct: 536 IALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVK 595
Query: 410 NMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSD 469
NMP EP V GALL + R++ N+ I + A L L+P +Y++LSNIYSA G W +
Sbjct: 596 NMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEE 655
Query: 470 AAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFG 528
+A VRAL K K L + G S+IE K ++F + + I+ LE+++S + + G
Sbjct: 656 SANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG 714
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 150/361 (41%), Gaps = 56/361 (15%)
Query: 64 CRVIHARVIKS-LDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPN---KDFVSWNSLVS 119
CR +HA+V+ S +R G + L+S Y +G DA+ +F+ + D WNS++
Sbjct: 72 CRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILK 131
Query: 120 GFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCA-----V 174
G N + ++ M+ LT I L R G++ C A +
Sbjct: 132 ANVSHGLYENALELYRGMRQ------RGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 175 KLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAIN 234
++G++ + VVN L+ +Y K G + A+ LF M +N +SWN M+ +Q A+
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 235 YFSMMRLNGLFPDEATMVSLL-----------------------------------QACE 259
F M+ PDE T S+L C
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 260 TLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTA 319
L + E VHG + G +E + L+++Y K G++ + +F +I + +
Sbjct: 306 ELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNS 365
Query: 320 MLSGYAMHGCGTEAIQFFERTIRE-----GMEPDHVTFTHLLSACSHSGLVDEGKHYFQV 374
+++ + G EA+ F + E ++ + VT+T ++ C+ G D+ YF+
Sbjct: 366 LITSFVDAGKLDEALSLFSE-LEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQ 424
Query: 375 M 375
M
Sbjct: 425 M 425
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 266/472 (56%), Gaps = 10/472 (2%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R +H+ + K RD I L+ Y G A+ LFDE+ +D VSWNS++SG+S+
Sbjct: 152 RSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEA 211
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G + M +F M+ + E +E T +S++ AC+ G+ + A+ + L +
Sbjct: 212 GYAKDAMDLFRKMEEE-GFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFL 270
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
+ LI+MYGK G +DSA ++F M +++ V+W +M+ V +QNG+ +EA F M G+
Sbjct: 271 GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 330
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
PD T+ ++L AC ++ L + + L NI + T L+++Y K GR+ + +
Sbjct: 331 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
VF + ++ AM++ YA G EA+ F+R + P +TF +LSAC H+GL
Sbjct: 391 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGL 447
Query: 365 VDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
V +G YF MS ++G+ P+++HY+ ++DLL R G+L++A E ++ P +P+ + A+L
Sbjct: 448 VHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAIL 507
Query: 425 GASRVYHNISIGKEAAENLIAL-DPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLA 483
GA +++I ++A L+ + + + NY++ SN+ + +W ++AK+RALM+ + +
Sbjct: 508 GACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVV 567
Query: 484 RNPGCSFIEHGNKIHRFVV-DDY---SHPDSDKIHKKLEEVMSKIQ-EFGFV 530
+ PGCS+IE ++ F+ DY DS + L E M + + EFG++
Sbjct: 568 KTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERYEFGYI 619
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 208/410 (50%), Gaps = 13/410 (3%)
Query: 44 RDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLF 103
R L L LK S+ R I A+++ + F L+ + +G + LF
Sbjct: 33 RGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNF----LIPKAVELGDFNYSSFLF 88
Query: 104 DEMPNKDFVSWNSLVSGFSKR-GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
+ S+N ++ G + D +S++ MK L+ ++ T+ V ACA +
Sbjct: 89 SVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFS-GLKPDKFTYNFVFIACAKLEE 147
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
G+ VH K+G+E V + ++LI MY K G V A KLF +TE++ VSWNSM++
Sbjct: 148 IGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISG 207
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
++ G +A++ F M G PDE T+VS+L AC L R + + T + +
Sbjct: 208 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS 267
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
+ + L+++Y K G L+++ +VF ++ K D+VA TAM++ Y+ +G +EA + F +
Sbjct: 268 TFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLN 402
G+ PD T + +LSAC G ++ GK + + +Q + + +VD+ G+CG +
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQ-IETHASELSLQHNIYVATGLVDMYGKCGRVE 386
Query: 403 DAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAE--NLIALDPSD 450
+A + + MP + N W A++ A Y + KEA + +++ PSD
Sbjct: 387 EALRVFEAMPVK-NEATWNAMITA---YAHQGHAKEALLLFDRMSVPPSD 432
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 143/306 (46%), Gaps = 10/306 (3%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + + ++L A L R++ I F+G +L+S Y G A+ +
Sbjct: 231 PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 290
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F++M KD V+W ++++ +S+ G +F M+ + + T +V+SAC A
Sbjct: 291 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT-GVSPDAGTLSTVLSACGSVGA 349
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
E G+ + A +L ++ + V L++MYGK G V+ A ++F AM +N +WN+M+
Sbjct: 350 LELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITA 409
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHL-RRLVEAVHGVIFTCGLDE 281
G EA+ F M + P + T + +L AC L + H + GL
Sbjct: 410 YAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVP 466
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEI-SKPDKVACTAMLSGYAMHGCGTEAIQFFERT 340
I T +++L S+ G L+ + + KPD++ A+L A H AI+ E+
Sbjct: 467 KIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILG--ACHKRKDVAIR--EKA 522
Query: 341 IREGME 346
+R ME
Sbjct: 523 MRMLME 528
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 275/524 (52%), Gaps = 33/524 (6%)
Query: 51 LLVALK-SSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNK 109
LL LK +L C + +H V+K + ++ + LV Y G A+ +FD +
Sbjct: 140 LLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE 199
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
D SWN ++SG+++ + + + M+ +L + +T + V+SAC+ K ++ + V
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNL-VSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGR- 228
H + E +++ N L+N Y G +D A ++F +M ++++SW S+V + G
Sbjct: 259 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 229 ----------P--------------------NEAINYFSMMRLNGLFPDEATMVSLLQAC 258
P NE++ F M+ G+ PDE TMVS+L AC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 259 ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACT 318
L + E + I + ++ + L+++Y K G + KVF ++ + DK T
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWT 438
Query: 319 AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV 378
AM+ G A +G G EAI+ F + ++PD +T+ +LSAC+HSG+VD+ + +F M
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 379 YGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKE 438
+ ++P L HY CMVD+LGR GL+ +A E+++ MP PNS VWGALLGASR++++ + +
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAEL 558
Query: 439 AAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIH 498
AA+ ++ L+P + Y +L NIY+ W D +VR + + + PG S IE H
Sbjct: 559 AAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAH 618
Query: 499 RFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAE 542
FV D SH S++I+ KLEE+ + ++ +T +L + +
Sbjct: 619 EFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 189/423 (44%), Gaps = 44/423 (10%)
Query: 94 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
G A LF ++P D V WN+++ G+SK G + ++ M + + + TF +
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKE-GVTPDSHTFPFL 140
Query: 154 ISACAL-AKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQN 212
++ A G+ +HC VK G+ + V N L+ MY G +D A +F +++
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
+ SWN M++ + E+I M N + P T++ +L AC + + L + VH
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 273 VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFA------------------------- 307
+ C + ++ + L+N Y+ G ++ + ++F
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 308 ------EISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSH 361
++ D+++ T M+ GY GC E+++ F GM PD T +L+AC+H
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 362 SGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWG 421
G ++ G+ + + D ++ + + ++D+ +CG A+++ +M + + W
Sbjct: 381 LGSLEIGE-WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWT 438
Query: 422 ALLGASRVYHNISIGKEAAENL-----IALDPSDPRNYIMLSNIYSASGLWSDAAKVRAL 476
A++ N G+EA + +++ P D Y+ + + + SG+ A K A
Sbjct: 439 AMVVG---LANNGQGQEAIKVFFQMQDMSIQPDDI-TYLGVLSACNHSGMVDQARKFFAK 494
Query: 477 MKT 479
M++
Sbjct: 495 MRS 497
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 21/272 (7%)
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGME----LQVKVVNTLINMYGKFGFVDSAFKLF 205
FIS++ C K ++ + +H ++ G+ Q K+ + G G V A+KLF
Sbjct: 37 FISILGVC---KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLG--GHVSYAYKLF 91
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRR 265
+ E ++V WN+M+ ++ E + + M G+ PD T LL L+R
Sbjct: 92 VKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNG-----LKR 146
Query: 266 LVEA------VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTA 319
A +H + GL N+ + L+ +YS G ++ + VF K D +
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 320 MLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVY 379
M+SGY E+I+ R + P VT +LSACS D K + +S+
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC- 265
Query: 380 GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
+P L + +V+ CG ++ A + ++M
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRSM 297
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 247 DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLY-SKIG-RLNASCK 304
D + +S+L C+T + +H T G+ N T L + S++G ++ + K
Sbjct: 33 DYSRFISILGVCKTTDQ---FKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYK 89
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG- 363
+F +I +PD V M+ G++ C E ++ + ++EG+ PD TF LL+ G
Sbjct: 90 LFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG 149
Query: 364 -LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
L K + V+ +G+ L + +V + CGL++ A+
Sbjct: 150 ALACGKKLHCHVVK--FGLGSNLYVQNALVKMYSLCGLMDMAR 190
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/487 (32%), Positives = 259/487 (53%), Gaps = 8/487 (1%)
Query: 46 PLVSTLLVALKSSSSLYCCRV--IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLF 103
P T LK S ++ V +H K D ++G LV+ Y + DAQ +F
Sbjct: 159 PDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVF 218
Query: 104 DEMPNKD-FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
DE+P++D V WN+LV+G+S+ + + VFS M+ + + ++ T SV+SA ++
Sbjct: 219 DELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE-GVGVSRHTITSVLSAFTVSGD 277
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
+ G+ +H AVK G + V N LI+MYGK +++ A +F AM E+++ +WNS++ V
Sbjct: 278 IDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCV 337
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL--- 279
G + + F M +G+ PD T+ ++L C L R +HG + GL
Sbjct: 338 HDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNR 397
Query: 280 -DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
N I +L+++Y K G L + VF + D + M++GY + CG A+ F
Sbjct: 398 KSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFS 457
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC 398
R G++PD +TF LL ACSHSG ++EG+++ M VY + P DHY+C++D+LGR
Sbjct: 458 CMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRA 517
Query: 399 GLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLS 458
L +A EL + P N VW ++L + R++ N + A + L L+P Y+++S
Sbjct: 518 DKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMS 577
Query: 459 NIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLE 518
N+Y +G + + VR M+ + + + PGCS+I N +H F + +HP+ IH L
Sbjct: 578 NVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLS 637
Query: 519 EVMSKIQ 525
V+S +
Sbjct: 638 LVISHMH 644
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 143/283 (50%), Gaps = 10/283 (3%)
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLG-MELQVKVVNTLINMYGKFGFVDSAFKL 204
N T I+ + CA K GQ +H V+ G ++ + +L+NMY K G + A +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 205 FWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLR 264
F +E+++ +N++++ NG P +A+ + MR NG+ PD+ T SLL+ + + L
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 265 RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI-SKPDKVACTAMLSG 323
V+ VHG+ F G D + + + L+ YSK + + KVF E+ + D V A+++G
Sbjct: 178 D-VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Query: 324 YAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGV 381
Y+ +A+ F + EG+ T T +LSA + SG +D G+ H V + G
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKT---GS 293
Query: 382 QPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+ + ++D+ G+ L +A + + M E + W ++L
Sbjct: 294 GSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVL 335
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 172/373 (46%), Gaps = 14/373 (3%)
Query: 67 IHARVIKSLDYRDGFI------GDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSG 120
+ + I R GF+ G LV+ Y G A L+F +D +N+L+SG
Sbjct: 77 VSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISG 135
Query: 121 FSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMEL 180
F G + M + M+++ L ++ TF S++ + A + + VH A KLG +
Sbjct: 136 FVVNGSPLDAMETYREMRANGILP-DKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDS 193
Query: 181 QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ-NMVSWNSMVAVCTQNGRPNEAINYFSMM 239
V + L+ Y KF V+ A K+F + ++ + V WN++V +Q R +A+ FS M
Sbjct: 194 DCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKM 253
Query: 240 RLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRL 299
R G+ T+ S+L A ++HG+ G +I + L+++Y K L
Sbjct: 254 REEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWL 313
Query: 300 NASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSAC 359
+ +F + + D ++L + G + FER + G+ PD VT T +L C
Sbjct: 314 EEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTC 373
Query: 360 SHSGLVDEGK--HYFQVMSDVYGVQPRLDH-YSCMVDLLGRCGLLNDAKELIKNMPFEPN 416
+ +G+ H + ++S + + + ++ ++D+ +CG L DA+ + +M + +
Sbjct: 374 GRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK-D 432
Query: 417 SGVWGALLGASRV 429
S W ++ V
Sbjct: 433 SASWNIMINGYGV 445
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 248/431 (57%), Gaps = 7/431 (1%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
+ IH V K Y D ++ + LV Y G + +A +F EMP +D VSW +++GF++
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G + FS M D+E N T++ V+ + G+ +H +K + ++
Sbjct: 186 GLYKEALDTFSKM----DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLET 241
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLN-G 243
N LI+MY K + A ++F + +++ VSWNSM++ R EAI+ FS+M+ + G
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 244 LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
+ PD + S+L AC +L VH I T G+ + I T ++++Y+K G + +
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
++F I + A+L G A+HG G E++++FE ++ G +P+ VTF L+AC H+G
Sbjct: 362 EIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTG 421
Query: 364 LVDEGKHYFQVM-SDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGA 422
LVDEG+ YF M S Y + P+L+HY CM+DLL R GLL++A EL+K MP +P+ + GA
Sbjct: 422 LVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGA 481
Query: 423 LLGASRVYHNI-SIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKV 481
+L A + + + KE ++ + ++ D Y++LSNI++A+ W D A++R LMK K
Sbjct: 482 ILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKG 541
Query: 482 LARNPGCSFIE 492
+++ PG S+IE
Sbjct: 542 ISKVPGSSYIE 552
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 178/387 (45%), Gaps = 15/387 (3%)
Query: 46 PLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPD-----AQ 100
P S LL + SSL + I ++I RD I +++V+ +G + D +
Sbjct: 4 PEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTF---LGKSADFASYSSV 60
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
+L S+N+L+S ++ + + S+ + TF V AC
Sbjct: 61 ILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSN-GFSPDMFTFPPVFKACGKF 119
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV 220
EG+ +H K+G + V N+L++ YG G +A K+F M +++VSW ++
Sbjct: 120 SGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGII 179
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLD 280
T+ G EA++ FS M + P+ AT V +L + + L + +HG+I
Sbjct: 180 TGFTRTGLYKEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL 236
Query: 281 ENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE-R 339
++ L+++Y K +L+ + +VF E+ K DKV+ +M+SG EAI F
Sbjct: 237 ISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLM 296
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
G++PD T +LSAC+ G VD G+ + + G++ + +VD+ +CG
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCG 355
Query: 400 LLNDAKELIKNMPFEPNSGVWGALLGA 426
+ A E+ + N W ALLG
Sbjct: 356 YIETALEIFNGIR-SKNVFTWNALLGG 381
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 148/307 (48%), Gaps = 13/307 (4%)
Query: 27 TLLSETSVRFHSISTYPR---DPLVSTLLVALKSSSSLYCCRV---IHARVIKSLDYRDG 80
T + T + ++ T+ + +P ++T + L SS + C + IH ++K
Sbjct: 180 TGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISL 239
Query: 81 FIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD 140
G+ L+ Y+ DA +F E+ KD VSWNS++SG + +FS+M++
Sbjct: 240 ETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTS 299
Query: 141 LDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
++ + SV+SACA A + G++VH + G++ + +++MY K G++++
Sbjct: 300 SGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIET 359
Query: 201 AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACET 260
A ++F + +N+ +WN+++ +G E++ YF M G P+ T ++ L AC
Sbjct: 360 ALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCH 419
Query: 261 LHL----RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKV 315
L RR + + L + +++L + G L+ + ++ + KPD
Sbjct: 420 TGLVDEGRRYFHKMKSREYN--LFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVR 477
Query: 316 ACTAMLS 322
C A+LS
Sbjct: 478 ICGAILS 484
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 127/288 (44%), Gaps = 27/288 (9%)
Query: 215 SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVI 274
S+N++++ +P I + NG PD T + +AC R + +HG++
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 275 FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAI 334
G ++I + +L++ Y G +CKVF E+ D V+ T +++G+ G EA+
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 335 QFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDL 394
F + +EP+ T+ +L + G + GK ++ + L+ + ++D+
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS-LETGNALIDM 248
Query: 395 LGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNY 454
+C L+DA + + + + W +++ S + H KEA +
Sbjct: 249 YVKCEQLSDAMRVFGELE-KKDKVSWNSMI--SGLVH-CERSKEAID------------- 291
Query: 455 IMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVV 502
+ S + ++SG+ D + T VL+ ++HG +H +++
Sbjct: 292 -LFSLMQTSSGIKPDGH-----ILTSVLSACASLGAVDHGRWVHEYIL 333
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/459 (32%), Positives = 246/459 (53%), Gaps = 2/459 (0%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
IH IKS + G L Y G A+ +FD++ D SWN +++G + G
Sbjct: 292 IHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGY 351
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+SVFS M+S + + ++ S++ A A +G +H +K G + V N
Sbjct: 352 ADEAVSVFSQMRSSGFIP-DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCN 410
Query: 187 TLINMYGKFGFVDSAFKLFWAM-TEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
+L+ MY + F LF + VSWN+++ C Q+ +P E + F +M ++
Sbjct: 411 SLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE 470
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
PD TM +LL+ C + +L VH GL I L+++Y+K G L + ++
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
F + D V+ + ++ GYA G G EA+ F+ G+EP+HVTF +L+ACSH GLV
Sbjct: 531 FDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLV 590
Query: 366 DEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLG 425
+EG + M +G+ P +H SC+VDLL R G LN+A+ I M EP+ VW LL
Sbjct: 591 EEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLS 650
Query: 426 ASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARN 485
A + N+ + ++AAEN++ +DP + +++L +++++SG W +AA +R+ MK + +
Sbjct: 651 ACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKI 710
Query: 486 PGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKI 524
PG S+IE +KIH F +D HP+ D I+ L + S++
Sbjct: 711 PGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 168/320 (52%), Gaps = 2/320 (0%)
Query: 50 TLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNK 109
+L+ A SS SL R IH ++ S D + + ++S Y G+ DA+ +FD MP +
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
+ VS+ S+++G+S+ G + ++ M + DL ++ F S+I ACA + G+ +
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQE-DLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRP 229
H +KL + N LI MY +F + A ++F+ + ++++SW+S++A +Q G
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 230 NEAINYFSMMRLNGLF-PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTT 288
EA+++ M G+F P+E S L+AC +L +HG+ L N +
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCS 310
Query: 289 LLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPD 348
L ++Y++ G LN++ +VF +I +PD + +++G A +G EA+ F + G PD
Sbjct: 311 LCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPD 370
Query: 349 HVTFTHLLSACSHSGLVDEG 368
++ LL A + + +G
Sbjct: 371 AISLRSLLCAQTKPMALSQG 390
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 174/378 (46%), Gaps = 36/378 (9%)
Query: 131 MSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLIN 190
+ F + + ++ T+IS+I AC+ +++ +G+ +H + + + N +++
Sbjct: 51 LEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILS 110
Query: 191 MYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
MYGK G + A ++F M E+N+VS+ S++ +QNG+ EAI + M L PD+
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 251 MVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
S+++AC + L + +H + ++ L+ +Y + +++ + +VF I
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 311 KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM-EPDHVTFTHLLSACSHSGLVDEGK 369
D ++ +++++G++ G EA+ + + G+ P+ F L ACS D G
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 370 --HYFQVMSDVYGVQPRLDHYSC-MVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
H + S++ G C + D+ RCG LN A+ + + P++ W ++
Sbjct: 291 QIHGLCIKSELAGNAIA----GCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAG 345
Query: 427 SRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALM--KTKVLAR 484
N EA + S + S SG DA +R+L+ +TK +A
Sbjct: 346 ---LANNGYADEAVS--------------VFSQMRS-SGFIPDAISLRSLLCAQTKPMA- 386
Query: 485 NPGCSFIEHGNKIHRFVV 502
+ G +IH +++
Sbjct: 387 ------LSQGMQIHSYII 398
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + LL SSL +H +K+ + FI + L+ Y G+ A+ +
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD M N+D VSW++L+ G+++ G + +F MKS +E N +TF+ V++AC+
Sbjct: 531 FDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKS-AGIEPNHVTFVGVLTACSHVGL 589
Query: 163 REEGQYVHCC-AVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSMV 220
EEG ++ + G+ + + ++++ + G ++ A + M E ++V W +++
Sbjct: 590 VEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLL 649
Query: 221 AVCTQNG 227
+ C G
Sbjct: 650 SACKTQG 656
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 175/587 (29%), Positives = 285/587 (48%), Gaps = 53/587 (9%)
Query: 47 LVSTLLVALKSSSSLYCCRVI-HARVIKSLDYRDGFI-----GDQLVSCYLNMGATPDAQ 100
+V + + + S+ C +VI + S+ + GFI G+ LV Y G DA+
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
+FD + NKD +WNS+++G+ + G G +F+ M+ D +L N +T+
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ-DANLRPNIITW---------- 456
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM-----TEQNMVS 215
NT+I+ Y K G A LF M ++N +
Sbjct: 457 -------------------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
WN ++A QNG+ +EA+ F M+ + P+ T++SLL AC L ++V +HG +
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL 551
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
LD + L + Y+K G + S +F + D + +++ GY +HG A+
Sbjct: 552 RRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALA 611
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
F + +G+ P+ T + ++ A G VDEGK F +++ Y + P L+H S MV L
Sbjct: 612 LFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLY 671
Query: 396 GRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYI 455
GR L +A + I+ M + + +W + L R++ +I + AAENL +L+P +
Sbjct: 672 GRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATES 731
Query: 456 MLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHK 515
++S IY+ + + + +L + G S+IE N IH F D S +D ++
Sbjct: 732 IVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLY- 790
Query: 516 KLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVS--AADMPLVI 573
L E MS++ E + EE + HSEK A+A+GL+ S A+ + I
Sbjct: 791 PLVEKMSRLDNRSDQYNGELW---IEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRI 847
Query: 574 IKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+KNLR+CRDCH TAK+VS I++ D + HHF +G CSC DYW
Sbjct: 848 LKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 170/367 (46%), Gaps = 45/367 (12%)
Query: 49 STLLVALKS---SSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDE 105
ST L L+S S S++ R++HAR D F+ +L+S Y G DA+ +FD
Sbjct: 82 STYLKLLESCIDSGSIHLGRILHAR-FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 106 MPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
M ++ +W++++ +S+ +F +M D L ++ F ++ CA E
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLP-DDFLFPKILQGCANCGDVEA 199
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQ 225
G+ +H +KLGM ++V N+++ +Y K G +D A K F M E+++++WNS++ Q
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
NG+ EA+ M G+ P T NI
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTW------------------------------NI-- 287
Query: 286 VTTLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
L+ Y+++G+ +A+ + ++ D TAM+SG +G +A+ F +
Sbjct: 288 ---LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
G+ P+ VT +SACS ++++G + + + L S +VD+ +CG L
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS-LVDMYSKCGKL 403
Query: 402 NDAKELI 408
DA+++
Sbjct: 404 EDARKVF 410
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 161/391 (41%), Gaps = 43/391 (10%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P D L +L + + +VIH+ VIK + + +++ Y G A
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F M +D ++WNS++ + + G + + M+
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME------------------------ 274
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE----QNMVSWNS 218
K G+ + N LI Y + G D+A L M ++ +W +
Sbjct: 275 ------------KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTA 322
Query: 219 MVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCG 278
M++ NG +A++ F M L G+ P+ T++S + AC L + VH + G
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 279 LDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
+++ + +L+++YSK G+L + KVF + D +M++GY G +A + F
Sbjct: 383 FIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC 398
R + P+ +T+ ++S +G E FQ M VQ ++ ++ +
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 399 GLLNDAKELIKNMPFE---PNSGVWGALLGA 426
G ++A EL + M F PNS +LL A
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIK-SLDYRDGFIGDQLVSCYLNMGATPDAQL 101
P + +LL A + R IH V++ +LD + + L Y G ++
Sbjct: 522 PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHA-VKNALTDTYAKSGDIEYSRT 580
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+F M KD ++WNSL+ G+ G G +++F+ MK+ + N T S+I A L
Sbjct: 581 IFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQ-GITPNRGTLSSIILAHGLMG 639
Query: 162 AREEGQYV-HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVS-WNSM 219
+EG+ V + A + ++ + ++ +YG+ ++ A + M Q+ W S
Sbjct: 640 NVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESF 699
Query: 220 VAVCTQNGRPNEAI----NYFSM 238
+ C +G + AI N FS+
Sbjct: 700 LTGCRIHGDIDMAIHAAENLFSL 722
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 237/438 (54%), Gaps = 6/438 (1%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN-----CMSVFSVMKSD 140
L+ Y G+ +A LF MP+K+ V++N+++SGF + ++ + +F M+
Sbjct: 293 LLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR 352
Query: 141 LDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
LE + TF V+ AC+ AK E G+ +H K + + + LI +Y G +
Sbjct: 353 -GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTED 411
Query: 201 AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACET 260
+ F + ++Q++ SW SM+ QN + A + F + + + P+E T+ ++ AC
Sbjct: 412 GMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACAD 471
Query: 261 LHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAM 320
E + G G+D ++ T+ +++Y+K G + + +VF E+ PD +AM
Sbjct: 472 FAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAM 531
Query: 321 LSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYG 380
+S A HG EA+ FE G++P+ F +L AC H GLV +G YFQ M + Y
Sbjct: 532 ISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYR 591
Query: 381 VQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAA 440
+ P H++C+VDLLGR G L+DA+ LI + F+ + W ALL + RVY + IGK A
Sbjct: 592 INPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVA 651
Query: 441 ENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRF 500
E L+ L+P +Y++L NIY+ SG+ S A +VR LM+ + + + P S+I GN+ H F
Sbjct: 652 ERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSF 711
Query: 501 VVDDYSHPDSDKIHKKLE 518
V D SHP S I+ LE
Sbjct: 712 AVADLSHPSSQMIYTMLE 729
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 174/349 (49%), Gaps = 14/349 (4%)
Query: 35 RFHSISTYPRDPLVST-----LLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSC 89
RF S P++ + + L S S+ ++ H +IKS ++ + L++
Sbjct: 32 RFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNM 91
Query: 90 YLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELT 149
Y A+ LFD MP ++ +S+NSL+SG+++ G M +F + + +L+L++ T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELF-LEAREANLKLDKFT 150
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
+ + C + G+ +H V G+ QV ++N LI+MY K G +D A LF
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 210 EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVE- 268
E++ VSWNS+++ + G E +N + M +GL + S+L+AC +E
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 269 --AVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAM 326
A+H G++ +I + T LL++Y+K G L + K+F+ + + V AM+SG+
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 327 HG-----CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKH 370
+EA + F R G+EP TF+ +L ACS + ++ G+
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQ 379
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 131/286 (45%), Gaps = 27/286 (9%)
Query: 30 SETSVRFHSISTYPRDPLVSTLLVALKSSS---SLYCCRVIHARVIKSLDYRDGFIGDQL 86
SE F + +P ST V LK+ S +L R IHA + K+ D FIG L
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 399
Query: 87 VSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELN 146
+ Y MG+T D F +D SW S++ + L + +F + S +
Sbjct: 400 IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS-HIRPE 458
Query: 147 ELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFW 206
E T ++SACA A G+ + A+K G++ V + I+MY K G + A ++F
Sbjct: 459 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 207 AMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRL 266
+ ++ ++++M++ Q+G NEA+N F M+ +G+ P++ + +L AC
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC-------- 570
Query: 267 VEAVHGVIFTCGL------------DENITIVTTLLNLYSKIGRLN 300
HG + T GL + N T L++L + GRL+
Sbjct: 571 ---CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLS 613
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 159/533 (29%), Positives = 267/533 (50%), Gaps = 34/533 (6%)
Query: 36 FHSISTYPRDPLVSTLLVALKSSSSLYC---CRVIHARVIKSLDYRDGFIGDQLVSCYLN 92
+ S + P +S +L AL + R +H VI+ D F+G+ +++ Y
Sbjct: 120 YSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTK 179
Query: 93 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 152
A+ +FDEM +D VSWNS++SG+S+ G +C ++ M + D + N +T IS
Sbjct: 180 CDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVIS 239
Query: 153 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQN 212
V AC + G VH ++ +++ + + N +I Y K G +D A LF M+E++
Sbjct: 240 VFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKD 299
Query: 213 MVS-------------------------------WNSMVAVCTQNGRPNEAINYFSMMRL 241
V+ WN+M++ QN E IN F M
Sbjct: 300 SVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIR 359
Query: 242 NGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNA 301
G P+ T+ SLL + + + +H G D NI + T++++ Y+K+G L
Sbjct: 360 CGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLG 419
Query: 302 SCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSH 361
+ +VF +A TA+++ YA+HG A F++ G +PD VT T +LSA +H
Sbjct: 420 AQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAH 479
Query: 362 SGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWG 421
SG D +H F M Y ++P ++HY+CMV +L R G L+DA E I MP +P + VWG
Sbjct: 480 SGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWG 539
Query: 422 ALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKV 481
ALL + V ++ I + A + L ++P + NY +++N+Y+ +G W +A VR MK
Sbjct: 540 ALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIG 599
Query: 482 LARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETE 534
L + PG S+IE + F+ D S S ++++ +E ++ + + ++ + E
Sbjct: 600 LKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYIRKQE 652
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 174/386 (45%), Gaps = 46/386 (11%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+HAR++ D F+ +L+S Y A +FDE+ ++ S+N+L+ ++ R
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 127 LGNCMSVF------SVMKSDLDL--ELNELTFISVISACALAKAREEGQYVHCCAVKLGM 178
+ S+F S SD ++ + +S C + VH ++ G
Sbjct: 104 YFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGF 163
Query: 179 ELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAIN-YFS 237
+ V V N +I Y K ++SA K+F M+E+++VSWNSM++ +Q+G + Y +
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 238 MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
M+ + P+ T++S+ QAC VH + + ++++ ++ Y+K G
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 298 RLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEA------------------------ 333
L+ + +F E+S+ D V A++SGY HG EA
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQ 343
Query: 334 -------IQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVM----SDVYG 380
I F IR G P+ VT + LL + ++S + GK H F + +++Y
Sbjct: 344 NNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYV 403
Query: 381 VQPRLDHYSCMVDLLGRCGLLNDAKE 406
+D+Y+ + LLG + ++ K+
Sbjct: 404 TTSIIDNYAKLGFLLGAQRVFDNCKD 429
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 267/476 (56%), Gaps = 5/476 (1%)
Query: 48 VSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP 107
+++ L A LY + +H +K RD G L+ Y G DA+ +F +P
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 108 NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQ 167
VS N+L++G+S+ +L + +F M + + +E+TF +++ AC ++ G
Sbjct: 592 EWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTR-GVNPSEITFATIVEACHKPESLTLGT 649
Query: 168 YVHCCAVKLGMELQVKVVN-TLINMYGKFGFVDSAFKLFWAMTE-QNMVSWNSMVAVCTQ 225
H K G + + + +L+ MY + A LF ++ +++V W M++ +Q
Sbjct: 650 QFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQ 709
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
NG EA+ ++ MR +G+ PD+AT V++L+ C L R A+H +IF D +
Sbjct: 710 NGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISK-PDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
TL+++Y+K G + S +VF E+ + + V+ ++++GYA +G +A++ F+ +
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH 829
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
+ PD +TF +L+ACSH+G V +G+ F++M YG++ R+DH +CMVDLLGR G L +A
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA 889
Query: 405 KELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSAS 464
+ I+ +P++ +W +LLGA R++ + G+ +AE LI L+P + Y++LSNIY++
Sbjct: 890 DDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQ 949
Query: 465 GLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEV 520
G W A +R +M+ + + + PG S+I+ + H F D SH + KI LE++
Sbjct: 950 GCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 173/340 (50%), Gaps = 2/340 (0%)
Query: 20 HCLPTCCTLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRD 79
H C T+ E S + ++L A+ ++L V+HA IK +
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 80 GFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
++G LVS Y A +F+ + K+ V WN+++ G++ G+ M +F MKS
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+++ TF S++S CA + E G H +K + + V N L++MY K G ++
Sbjct: 422 S-GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 480
Query: 200 SAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACE 259
A ++F M +++ V+WN+++ Q+ +EA + F M L G+ D A + S L+AC
Sbjct: 481 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 540
Query: 260 TLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTA 319
+H + VH + CGLD ++ ++L+++YSK G + + KVF+ + + V+ A
Sbjct: 541 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600
Query: 320 MLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSAC 359
+++GY+ + EA+ F+ + G+ P +TF ++ AC
Sbjct: 601 LIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 166/327 (50%), Gaps = 2/327 (0%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
+++ Y+ +G DA+LLF EM + D V+WN ++SG KRG + F M+ ++
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS-SVKS 325
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF 205
T SV+SA + + G VH A+KLG+ + V ++L++MY K +++A K+F
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRR 265
A+ E+N V WN+M+ NG ++ + F M+ +G D+ T SLL C H
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 266 LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYA 325
+ H +I L +N+ + L+++Y+K G L + ++F + D V ++ Y
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 326 MHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRL 385
+EA F+R G+ D L AC+H + +GK +S G+ L
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKCGLDRDL 564
Query: 386 DHYSCMVDLLGRCGLLNDAKELIKNMP 412
S ++D+ +CG++ DA+++ ++P
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 171/389 (43%), Gaps = 46/389 (11%)
Query: 42 YPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
+P S +L +++ R IH +IK R+ + G LV Y DA+
Sbjct: 157 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+F+ + + + V W L SG+ K G + VF M+ D + L F+
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR-DEGHRPDHLAFV---------- 265
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
T+IN Y + G + A LF M+ ++V+WN M++
Sbjct: 266 -------------------------TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 300
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
+ G AI YF MR + + +T+ S+L A + L VH GL
Sbjct: 301 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 360
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
NI + ++L+++YSK ++ A+ KVF + + + V AM+ GYA +G + ++ F
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY----SCMVDLLGR 397
G D TFT LLS C+ S ++ G + ++ ++ +L + +VD+ +
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSII-----IKKKLAKNLFVGNALVDMYAK 475
Query: 398 CGLLNDAKELIKNMPFEPNSGVWGALLGA 426
CG L DA+++ + M N W ++G+
Sbjct: 476 CGALEDARQIFERMCDRDNV-TWNTIIGS 503
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 160/366 (43%), Gaps = 41/366 (11%)
Query: 60 SLYCCRVIHAR-VIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLV 118
+L + +H++ +I +D +G +G+ +V Y A+ FD + KD +WNS++
Sbjct: 75 ALRIGKAVHSKSLILGID-SEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSML 132
Query: 119 SGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGM 178
S +S G G + F + + + N+ TF V+S CA E G+ +HC +K+G+
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFEN-QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 179 ELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSM 238
E L++MY K + A ++F + + N V W + + + G P EA+ F
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 239 MRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR 298
MR G PD V T++N Y ++G+
Sbjct: 252 MRDEGHRPDHLAFV-----------------------------------TVINTYIRLGK 276
Query: 299 LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA 358
L + +F E+S PD VA M+SG+ GC T AI++F + ++ T +LSA
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 359 CSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSG 418
+D G + G+ + S +V + +C + A ++ + + E N
Sbjct: 337 IGIVANLDLGL-VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKNDV 394
Query: 419 VWGALL 424
W A++
Sbjct: 395 FWNAMI 400
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 150/326 (46%), Gaps = 20/326 (6%)
Query: 159 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNS 218
LA A G+ VH ++ LG++ + ++ N ++++Y K V A K F E+++ +WNS
Sbjct: 72 LALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNS 130
Query: 219 MVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCG 278
M+++ + G+P + + F + N +FP++ T +L C +H + G
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 279 LDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
L+ N L+++Y+K R++ + +VF I P+ V T + SGY G EA+ FE
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC 398
R EG PDH+ F +++ G + + + F MS P + ++ M+ G+
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKR 305
Query: 399 GLLNDAKELIKNM---PFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYI 455
G A E NM + G++L A + N+ +G I L
Sbjct: 306 GCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG-------- 357
Query: 456 MLSNIYSASGL---WSDAAKVRALMK 478
+ SNIY S L +S K+ A K
Sbjct: 358 LASNIYVGSSLVSMYSKCEKMEAAAK 383
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 250/474 (52%), Gaps = 28/474 (5%)
Query: 59 SSLYCCRV------------IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
SSLY C I R+ + RD + +++CY + G +A LFD+M
Sbjct: 177 SSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKM 236
Query: 107 ----PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
++WN + G + G+ + + S M+ + L+ + I + AC+L A
Sbjct: 237 WFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR-NFPTSLDPVAMIIGLKACSLIGA 295
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
G+ +H A+ + V NTLI MY K + A +F E ++ +WNS+++
Sbjct: 296 IRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISG 355
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL--- 279
Q + EA + M + G P+ T+ S+L C R+ HG F C +
Sbjct: 356 YAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCA-----RIANLQHGKEFHCYILRR 410
Query: 280 ---DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQF 336
+ + +L+++Y+K G++ A+ +V +SK D+V T+++ GY G G A+
Sbjct: 411 KCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
Query: 337 FERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLG 396
F+ R G++PDHVT +LSACSHS LV EG+ F M YG++P L H+SCMVDL G
Sbjct: 471 FKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYG 530
Query: 397 RCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIM 456
R G L AK++I NMP++P+ W LL A ++ N IGK AAE L+ + P +P Y++
Sbjct: 531 RAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVL 590
Query: 457 LSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDS 510
++N+Y+A+G WS A+VR +M+ + ++PGC++I+ + F V D S P++
Sbjct: 591 IANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEA 644
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 6/248 (2%)
Query: 121 FSKRGDLGNCMSVFSVMK----SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKL 176
+ G L + FS+++ S + +L + S++SAC +A G VH +
Sbjct: 13 LASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISS 72
Query: 177 GMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYF 236
G+E +V L+ Y F + A + + + WN ++A +N E I +
Sbjct: 73 GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAY 132
Query: 237 SMMRLNGLFPDEATMVSLLQAC-ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSK 295
M G+ PD T S+L+AC ETL + VHG I ++ + L+++Y +
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACGETLDV-AFGRVVHGSIEVSSYKSSLYVCNALISMYKR 191
Query: 296 IGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHL 355
+ + ++F + + D V+ A+++ YA G +EA + F++ G+E +T+ +
Sbjct: 192 FRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNII 251
Query: 356 LSACSHSG 363
C +G
Sbjct: 252 SGGCLQTG 259
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 218/357 (61%), Gaps = 2/357 (0%)
Query: 152 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
S + +C L + G HC A+K G V + ++L+ +Y G V++A+K+F M E+
Sbjct: 125 SAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPER 184
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVH 271
N+VSW +M++ Q R + + +S MR + P++ T +LL AC +VH
Sbjct: 185 NVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVH 244
Query: 272 GVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGT 331
GL + I +L+++Y K G L + ++F + S D V+ +M++GYA HG
Sbjct: 245 CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAM 304
Query: 332 EAIQFFERTI-REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC 390
+AI+ FE + + G +PD +T+ +LS+C H+GLV EG+ +F +M++ +G++P L+HYSC
Sbjct: 305 QAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSC 363
Query: 391 MVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSD 450
+VDLLGR GLL +A ELI+NMP +PNS +WG+LL + RV+ ++ G AAE + L+P
Sbjct: 364 LVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDC 423
Query: 451 PRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSH 507
++ L+N+Y++ G W +AA VR LMK K L NPGCS+IE N + F +D S+
Sbjct: 424 AATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSN 480
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 157/301 (52%), Gaps = 9/301 (2%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
H +K D ++G LV Y + G +A +F+EMP ++ VSW +++SGF++
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWR 201
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ C+ ++S M+ + N+ TF +++SAC + A +G+ VHC + +G++ + + N
Sbjct: 202 VDICLKLYSKMRKSTS-DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISN 260
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFS-MMRLNGLF 245
+LI+MY K G + AF++F + +++VSWNSM+A Q+G +AI F MM +G
Sbjct: 261 SLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTK 320
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
PD T + +L +C L + ++ GL + + L++L + G L + ++
Sbjct: 321 PDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALEL 380
Query: 306 FAEIS-KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPD----HVTFTHLLSACS 360
+ KP+ V ++L +HG I+ E + +EPD HV +L ++
Sbjct: 381 IENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM--LEPDCAATHVQLANLYASVG 438
Query: 361 H 361
+
Sbjct: 439 Y 439
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 237 SMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKI 296
S ++ +G D + S +++C R H + G ++ + ++L+ LY
Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS 168
Query: 297 GRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLL 356
G + + KVF E+ + + V+ TAM+SG+A ++ + + + +P+ TFT LL
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 357 SACSHSGLVDEGKH-YFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
SAC+ SG + +G+ + Q + G++ L + ++ + +CG L DA
Sbjct: 229 SACTGSGALGQGRSVHCQTLH--MGLKSYLHISNSLISMYCKCGDLKDA 275
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/476 (33%), Positives = 249/476 (52%), Gaps = 5/476 (1%)
Query: 19 LHCLPTCCTLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYR 78
LHC T L R +S P + + AL + +L + +H +
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLS--PNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK 138
D + ++ Y A+ +FD K+ V+W++++ G+ + + VF M
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 139 SDLDLELNELTFISVI-SACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGF 197
+ ++ + I +I CA G+ VHC AVK G L + V NT+I+ Y K+G
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 198 VDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA 257
+ AF+ F + ++++S+NS++ C N RP E+ F MR +G+ PD T++ +L A
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 258 CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVAC 317
C L + HG G N +I L+++Y+K G+L+ + +VF + K D V+
Sbjct: 419 CSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSW 478
Query: 318 TAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS- 376
ML G+ +HG G EA+ F G+ PD VT +LSACSHSGLVDEGK F MS
Sbjct: 479 NTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538
Query: 377 DVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIG 436
+ V PR+DHY+CM DLL R G L++A + + MPFEP+ V G LL A Y N +G
Sbjct: 539 GDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELG 598
Query: 437 KEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIE 492
E ++ + +L + + ++LSN YSA+ W DAA++R + K + L + PG S+++
Sbjct: 599 NEVSKKMQSLGET-TESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 177/383 (46%), Gaps = 19/383 (4%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
++IH+ V S D ++ LV Y G A +FDEMP +D V+WN+++SGFS
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
L + + +F M+ L N T + + A A A EG+ VH ++G + V
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
++++Y K + A ++F ++N V+W++M+ +N EA F M +N
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN-- 300
Query: 245 FPDEATMVS------LLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR 298
D MV+ +L C VH G ++T+ T+++ Y+K G
Sbjct: 301 --DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 299 LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA 358
L + + F+EI D ++ ++++G ++ E+ + F G+ PD T +L+A
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 359 CSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPN 416
CSH + G H + V V+G + ++D+ +CG L+ AK + M + +
Sbjct: 419 CSHLAALGHGSSCHGYCV---VHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM-HKRD 474
Query: 417 SGVWGALLGASRVYHNISIGKEA 439
W +L ++ +GKEA
Sbjct: 475 IVSWNTMLFGFGIH---GLGKEA 494
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 25/304 (8%)
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVK-VVNTLINMYGKFGFVDSAFKLFWAM 208
F+S++ C ++ GQ +H +K + L V+ L +Y V+ A +F +
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 209 TEQ--NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRL 266
N ++W+ M+ N +A++ + M +G+ P + T +L+AC L
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 267 VEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAM 326
+ +H + ++ + T L++ Y+K G L + KVF E+ K D VA AM+SG+++
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 327 HGCGTEAIQFFERTIR-EGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRL 385
H C T+ I F R +G+ P+ T + A +G + EGK V+G R+
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKA-------VHGYCTRM 234
Query: 386 DHYSCMVDLLGRCGLLN---DAKELIK-----NMPFEPNSGVWGALLGASRVYHNISIGK 437
+ DL+ + G+L+ +K +I ++ F+ N W A++G Y + K
Sbjct: 235 GFSN---DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGG---YVENEMIK 288
Query: 438 EAAE 441
EA E
Sbjct: 289 EAGE 292
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 213/346 (61%), Gaps = 2/346 (0%)
Query: 182 VKVVNTLINMYGKFGFVDSAFKLFWAMT--EQNMVSWNSMVAVCTQNGRPNEAINYFSMM 239
V V N L+ YGK G +D A L M +N VSW +++ ++GR +EAI F M
Sbjct: 182 VNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM 241
Query: 240 RLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRL 299
+ + PDE T++++L AC L L E + + G++ +++ ++++Y+K G +
Sbjct: 242 LMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNI 301
Query: 300 NASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSAC 359
+ VF +++ + V T +++G A HG G EA+ F R ++ G+ P+ VTF +LSAC
Sbjct: 302 TKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSAC 361
Query: 360 SHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGV 419
SH G VD GK F M YG+ P ++HY CM+DLLGR G L +A E+IK+MPF+ N+ +
Sbjct: 362 SHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAI 421
Query: 420 WGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKT 479
WG+LL AS V+H++ +G+ A LI L+P++ NY++L+N+YS G W ++ +R +MK
Sbjct: 422 WGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKG 481
Query: 480 KVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQ 525
+ + G S IE N++++F+ D +HP ++IH+ L+E+ +IQ
Sbjct: 482 IGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 156/311 (50%), Gaps = 18/311 (5%)
Query: 78 RDGFIGDQLVSCYLNMGATPDAQLLFDEMP--NKDFVSWNSLVSGFSKRGDLGNCMSVFS 135
+D + + L++ Y +G +A+ L + MP ++ VSW ++SG++K G + VF
Sbjct: 180 KDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQ 239
Query: 136 VMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKF 195
M + ++E +E+T ++V+SACA + E G+ + GM V + N +I+MY K
Sbjct: 240 RMLME-NVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKS 298
Query: 196 GFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
G + A +F + E+N+V+W +++A +G EA+ F+ M G+ P++ T +++L
Sbjct: 299 GNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAIL 358
Query: 256 QACETLHL----RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS- 310
AC + +RL ++ G+ NI +++L + G+L + +V +
Sbjct: 359 SACSHVGWVDLGKRLFNSMRS---KYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPF 415
Query: 311 KPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE--GMEPDHVTFTHLLSAC-SHSGLVDE 367
K + ++L+ +H ++ ER + E +EP++ LL+ S+ G DE
Sbjct: 416 KANAAIWGSLLAASNVH----HDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDE 471
Query: 368 GKHYFQVMSDV 378
+ +M +
Sbjct: 472 SRMMRNMMKGI 482
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 111/276 (40%), Gaps = 37/276 (13%)
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRP 229
HC + G+ V I G + A+ +F N N+M+ + P
Sbjct: 35 HCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEP 94
Query: 230 NE---AINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIV 286
N AI + + PD T +L+ + +HG + G D ++ +V
Sbjct: 95 NAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVV 154
Query: 287 TTLLNLYSKIGRLNASCKVFAEISKPD--------------------------------- 313
T L+ +Y G L + K+F E+ D
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 314 KVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQ 373
+V+ T ++SGYA G +EAI+ F+R + E +EPD VT +LSAC+ G ++ G+
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 374 VMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIK 409
+ D G+ + + ++D+ + G + A ++ +
Sbjct: 275 YV-DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE 309
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 166/568 (29%), Positives = 278/568 (48%), Gaps = 88/568 (15%)
Query: 28 LLSETSVRFHSISTYPRDPLVSTLLVA--LKSSSSLYCCRVIHARVIKSLDYRDGFIGDQ 85
L +ET V+F RD + S +L++ L++ RV +K +
Sbjct: 166 LYAETPVKF-------RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVK-----------E 207
Query: 86 LVSC------YLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
+VSC Y MG DA+ LFD M ++ ++W +++ G+ K G + +F M+
Sbjct: 208 VVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQ 267
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ D+++N T + AC EG +H ++ +E + + N+L++MY K G++
Sbjct: 268 EGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMG 327
Query: 200 SAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMM-------------------- 239
A +F M ++ VSWNS++ Q + +EA F M
Sbjct: 328 EAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGE 387
Query: 240 -----RLNGLFP--DEATMVSLLQA---------------------------------CE 259
L G+ P D T +++ A
Sbjct: 388 ISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Query: 260 TLHLRRLVEA--VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVAC 317
T L L+E +HG + + ++++ +L+++Y K G N + K+F+ IS+P+ V+
Sbjct: 448 TASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSY 507
Query: 318 TAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSD 377
M+SGY+ +G G +A++ F G EP+ VTF LLSAC H G VD G YF+ M
Sbjct: 508 NTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKS 567
Query: 378 VYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGK 437
Y ++P DHY+CMVDLLGR GLL+DA LI MP +P+SGVWG+LL AS+ + + + +
Sbjct: 568 SYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAE 627
Query: 438 EAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKI 497
AA+ LI L+P Y++LS +YS G D ++ + K+K + ++PG S+I ++
Sbjct: 628 LAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEV 687
Query: 498 HRFVVDDYSHPDSDKIHKKLEEVMSKIQ 525
H F+ D S + ++I L+ + +++
Sbjct: 688 HNFLAGDESQLNLEEIGFTLKMIRKEME 715
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 172/380 (45%), Gaps = 56/380 (14%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSK-RGDLGNCMSVFSVMKSDLDLE 144
++S Y G A +FDEMP + S+N++++ K + DLG +F + E
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP-----E 141
Query: 145 LNELTFISVISACALAKAREEGQYVHCC--------------------------AVKLGM 178
N +++ ++I+ A +E ++++ AV++
Sbjct: 142 KNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQ 201
Query: 179 ELQVKVV---NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINY 235
+ VK V +++++ Y K G + A LF MTE+N+++W +M+ + G +
Sbjct: 202 GMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGL 261
Query: 236 FSMMRLNG-LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
F MR G + + T+ + +AC R +HG++ L+ ++ + +L+++YS
Sbjct: 262 FLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYS 321
Query: 295 KIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTH 354
K+G + + VF + D V+ ++++G +EA + FE+ + D V++T
Sbjct: 322 KLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTD 377
Query: 355 LLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH--YSCMVDLLGRCGLLNDA-----KEL 407
++ S G + + +++G+ P D+ ++ M+ G +A K L
Sbjct: 378 MIKGFSGKGEISK-------CVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKML 430
Query: 408 IKNMPFEPNSGVWGALLGAS 427
K + PNS + ++L A+
Sbjct: 431 QKEVC--PNSYTFSSVLSAT 448
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 131/306 (42%), Gaps = 31/306 (10%)
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
N+ I+ + + G + A +F M+ +++VSW +M++ +NG+ ++A F M +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 246 PDEATMVSLLQ-ACETLHLRRLVEAVHGVIFTCGLDE-NITIVTTLLNLYSKIGRLNASC 303
A + ++++ C+ L C + E N T++ + + GR + +
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELF---------CDIPEKNAVSYATMITGFVRAGRFDEAE 164
Query: 304 KVFAE--ISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGME-PDHVTFTHLLSACS 360
++AE + D VA +LSGY G EA++ F +GM + V+ + ++
Sbjct: 165 FLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVF-----QGMAVKEVVSCSSMVHGYC 219
Query: 361 HSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEP----N 416
G + + + F M+ + + ++ M+D + G D L M E N
Sbjct: 220 KMGRIVDARSLFDRMT-----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVN 274
Query: 417 SGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYI--MLSNIYSASGLWSDAAKVR 474
S + A R + G + L++ P + ++ L ++YS G +A V
Sbjct: 275 SNTLAVMFKACRDFVRYREGSQ-IHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 475 ALMKTK 480
+MK K
Sbjct: 334 GVMKNK 339
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 258/461 (55%), Gaps = 8/461 (1%)
Query: 36 FHSISTYPRDPLVSTLLVALKSSSSLYCCRV---IHARVIKSLDYRDGFIGDQLVSCYLN 92
F + ++ D TL A+K+ S L R+ H VI + FI L Y
Sbjct: 151 FVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGV 210
Query: 93 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 152
DA+ +FDEMP D + W +++S FSK + +F M L + TF +
Sbjct: 211 NREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGT 270
Query: 153 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQN 212
V++AC + ++G+ +H + G+ V V ++L++MYGK G V A ++F M+++N
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
VSW++++ QNG +AI F M L+ ++L+AC L RL + +HG
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----CFGTVLKACAGLAAVRLGKEIHG 386
Query: 273 VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTE 332
G N+ + + L++LY K G ++++ +V++++S + + AMLS A +G G E
Sbjct: 387 QYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEE 446
Query: 333 AIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMV 392
A+ FF +++G++PD+++F +L+AC H+G+VDEG++YF +M+ YG++P +HYSCM+
Sbjct: 447 AVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMI 506
Query: 393 DLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNIS-IGKEAAENLIALDPSDP 451
DLLGR GL +A+ L++ ++ +WG LLG + S + + A+ ++ L+P
Sbjct: 507 DLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYH 566
Query: 452 RNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIE 492
+Y++LSN+Y A G DA +R LM + +A+ G S+I+
Sbjct: 567 MSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 208/441 (47%), Gaps = 35/441 (7%)
Query: 7 AKFMTLTLSPRILHCLPT-------CCTLLSET-SVRF----HSISTYPRDP-LVSTLLV 53
++ +L L+P I PT C L T ++R HS S P P L ++LL
Sbjct: 11 SQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHS-SEIPATPKLYASLLQ 69
Query: 54 ALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMG-ATPDAQLLFDEMPNKDFV 112
S HA V+KS D +G+ L+S Y +G + + +FD KD +
Sbjct: 70 TCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAI 129
Query: 113 SWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCC 172
SW S++SG+ + + VF M S L+ NE T S + AC+ G+ H
Sbjct: 130 SWTSMMSGYVTGKEHVKALEVFVEMVS-FGLDANEFTLSSAVKACSELGEVRLGRCFHGV 188
Query: 173 AVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEA 232
+ G E + +TL +YG A ++F M E +++ W ++++ ++N EA
Sbjct: 189 VITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEA 248
Query: 233 IN-YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLN 291
+ +++M R GL PD +T ++L AC L + + +HG + T G+ N+ + ++LL+
Sbjct: 249 LGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLD 308
Query: 292 LYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVT 351
+Y K G + + +VF +SK + V+ +A+L GY +G +AI+ F RE E D
Sbjct: 309 MYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIF----REMEEKDLYC 364
Query: 352 FTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY------SCMVDLLGRCGLLNDAK 405
F +L AC+ V GK +++G R + S ++DL G+ G ++ A
Sbjct: 365 FGTVLKACAGLAAVRLGK-------EIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 406 ELIKNMPFEPNSGVWGALLGA 426
+ M N W A+L A
Sbjct: 418 RVYSKMSIR-NMITWNAMLSA 437
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 234/425 (55%), Gaps = 1/425 (0%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
+ +H +KS D +G L + Y G+ ++ LF +P KD W S++SGF++
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G L + +FS M D +E T +V++ C+ + G+ +H ++ G++ + +
Sbjct: 530 GYLREAIGLFSEMLDD-GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
+ L+NMY K G + A +++ + E + VS +S+++ +Q+G + F M ++G
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF 648
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
D + S+L+A L VH I GL ++ ++LL +YSK G ++ CK
Sbjct: 649 TMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCK 708
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
F++I+ PD +A TA+++ YA HG EA+Q + +G +PD VTF +LSACSH GL
Sbjct: 709 AFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGL 768
Query: 365 VDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
V+E + M YG++P HY CMVD LGR G L +A+ I NM +P++ VWG LL
Sbjct: 769 VEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLL 828
Query: 425 GASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLAR 484
A +++ + +GK AA+ I L+PSD YI LSNI + G W + + R LMK + +
Sbjct: 829 AACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQK 888
Query: 485 NPGCS 489
PG S
Sbjct: 889 EPGWS 893
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 190/390 (48%), Gaps = 19/390 (4%)
Query: 28 LLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLV 87
L E V F +Y S++L A S L +V+ ARVIK D F+ +V
Sbjct: 238 LFHEMCVGFQKPDSYT----YSSVLAACASLEKLRFGKVVQARVIK-CGAEDVFVCTAIV 292
Query: 88 SCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNE 147
Y G +A +F +PN VSW ++SG++K D + + +F M+ +E+N
Sbjct: 293 DLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHS-GVEINN 351
Query: 148 LTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWA 207
T SVISAC E VH K G L V LI+MY K G +D + ++F
Sbjct: 352 CTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411
Query: 208 MTE---QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLR 264
+ + QN+V N M+ +Q+ +P +AI F+ M GL DE ++ SLL + L+L
Sbjct: 412 LDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG 469
Query: 265 RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGY 324
+ VHG GL ++T+ ++L LYSK G L S K+F I D +M+SG+
Sbjct: 470 K---QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526
Query: 325 AMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQ 382
+G EAI F + +G PD T +L+ CS + GK H + + + G+
Sbjct: 527 NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA---GID 583
Query: 383 PRLDHYSCMVDLLGRCGLLNDAKELIKNMP 412
+D S +V++ +CG L A+++ +P
Sbjct: 584 KGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 169/335 (50%), Gaps = 7/335 (2%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK 138
D F+ L+S Y N G+ DA LFD +P D VS N ++SG+ + + FS M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 139 SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFV 198
L E NE+++ SVISAC+ +A + V C +K+G V + LI+++ K
Sbjct: 143 F-LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 199 DSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQAC 258
+ A+K+F N+ WN+++A +N + F M + PD T S+L AC
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 259 ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACT 318
+L R + V + CG E++ + T +++LY+K G + + +VF+ I P V+ T
Sbjct: 262 ASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWT 320
Query: 319 AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV 378
MLSGY A++ F+ G+E ++ T T ++SAC +V E QV + V
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEAS---QVHAWV 377
Query: 379 YGVQPRLDH--YSCMVDLLGRCGLLNDAKELIKNM 411
+ LD + ++ + + G ++ ++++ +++
Sbjct: 378 FKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 19/255 (7%)
Query: 178 MELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFS 237
+ V + +L++ Y G + A KLF + + ++VS N M++ Q+ E++ +FS
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 238 MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
M G +E + S++ AC L E V G + + L++++SK
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 298 RLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLS 357
R + KVF + + +++G + F +PD T++ +L+
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 358 ACSHSGLVDEGKHYFQVMSDVYGVQPRL------DHYSC--MVDLLGRCGLLNDAKELIK 409
AC+ + GK VQ R+ D + C +VDL +CG + +A E+
Sbjct: 260 ACASLEKLRFGKV----------VQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 410 NMPFEPNSGVWGALL 424
+P P+ W +L
Sbjct: 310 RIP-NPSVVSWTVML 323
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 259/485 (53%), Gaps = 5/485 (1%)
Query: 45 DPLVSTLLVALKSSSSLYCCRVIHARVIKSLDY---RDGFIGDQLVSCYLNMGATPDAQL 101
P ST + +K+ S A K++D+ D F+ +++ Y+ G +A++
Sbjct: 113 QPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEV 172
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
LF +M +D + W ++V+GF++ G + + M+++ + + + ++ A
Sbjct: 173 LFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE-GFGRDRVVMLGLLQASGDLG 231
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
+ G+ VH + G+ + V V +L++MY K GF++ A ++F M + VSW S+++
Sbjct: 232 DTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLIS 291
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
QNG N+A M+ G PD T+V +L AC + + VH I + +
Sbjct: 292 GFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLD 351
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
+T T L+++YSK G L++S ++F + + D V M+S Y +HG G E + F +
Sbjct: 352 RVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMT 410
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
+EPDH TF LLSA SHSGLV++G+H+F VM + Y +QP HY C++DLL R G +
Sbjct: 411 ESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRV 470
Query: 402 NDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIY 461
+A ++I + + +W ALL + N+S+G AA ++ L+P ++SN +
Sbjct: 471 EEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFF 530
Query: 462 SASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVM 521
+ + W + AKVR LM+ + + PG S IE ++ F+++D SH + + + L +
Sbjct: 531 ATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLK 590
Query: 522 SKIQE 526
++I++
Sbjct: 591 TEIRD 595
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 206/409 (50%), Gaps = 20/409 (4%)
Query: 67 IHARVIKSLDYRDGF-IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRG 125
IHA VI + + +G I L++ +G A+ +FDE+P + +NS++ +S+
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 126 DLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVV 185
+ + ++ M ++ ++ + TF I AC E+G+ V C AV G + V V
Sbjct: 96 NPDEVLRLYDQMIAE-KIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
++++N+Y K G +D A LF M +++++ W +MV Q G+ +A+ ++ M+ G
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
D M+ LLQA L ++ +VHG ++ GL N+ + T+L+++Y+K+G + + +V
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
F+ + V+ +++SG+A +G +A + G +PD VT +L ACS G +
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 366 DEGK--HYFQVMSDVYGVQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWG 421
G+ H + + V LD + ++D+ +CG L+ ++E+ +++ + W
Sbjct: 335 KTGRLVHCYILKRHV------LDRVTATALMDMYSKCGALSSSREIFEHVG-RKDLVCWN 387
Query: 422 ALLGASRVYHNISIGKEAAENLIALDPS----DPRNYIMLSNIYSASGL 466
++ ++ N G+E + + S D + L + S SGL
Sbjct: 388 TMISCYGIHGN---GQEVVSLFLKMTESNIEPDHATFASLLSALSHSGL 433
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 158 ALAKAREEGQYVHCCAVKLGMELQ-VKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSW 216
+++K + +H + G L + LI G+ G + A K+F + ++ + +
Sbjct: 25 SISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVY 84
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT 276
NSM+ V ++ P+E + + M + PD +T ++AC + + EAV
Sbjct: 85 NSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVD 144
Query: 277 CGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQF 336
G ++ + +++LNLY K G+++ + +F +++K D + T M++G+A G +A++F
Sbjct: 145 FGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEF 204
Query: 337 FERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLG 396
+ EG D V LL A G G+ + G+ + + +VD+
Sbjct: 205 YREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT-GLPMNVVVETSLVDMYA 263
Query: 397 RCGLLNDAKELIKNMPFEPNSGVWGALL 424
+ G + A + M F+ WG+L+
Sbjct: 264 KVGFIEVASRVFSRMMFKTAVS-WGSLI 290
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 106/227 (46%), Gaps = 6/227 (2%)
Query: 31 ETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCY 90
E V S+ P + +LVA SL R++H ++K D L+ Y
Sbjct: 304 EAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR-HVLDRVTATALMDMY 362
Query: 91 LNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTF 150
GA ++ +F+ + KD V WN+++S + G+ +S+F M ++ ++E + TF
Sbjct: 363 SKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKM-TESNIEPDHATF 421
Query: 151 ISVISACALAKAREEGQYVHCCAV-KLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
S++SA + + E+GQ+ + K ++ K LI++ + G V+ A + +
Sbjct: 422 ASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEK 481
Query: 210 EQNMVS-WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
N + W ++++ C + N ++ + ++ L PD + +L+
Sbjct: 482 LDNALPIWVALLSGCINH--RNLSVGDIAANKILQLNPDSIGIQTLV 526
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 269/526 (51%), Gaps = 38/526 (7%)
Query: 37 HSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIK-SLDYRDGFIGDQLVSCYLNMGA 95
H P + ++L + L + IH+ +++ S D +G+ L+S Y G
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381
Query: 96 TPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS 155
T A F M KD +SWN+++ F+ +++ + ++ + L+ +T +S++
Sbjct: 382 TSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEA-ITLDSVTILSLLK 440
Query: 156 ACALAKAREEGQYVHCCAVKLGM---ELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ- 211
C + + + VH +VK G+ E + K+ N L++ Y K G V+ A K+F ++E+
Sbjct: 441 FCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERR 500
Query: 212 -------------------------------NMVSWNSMVAVCTQNGRPNEAINYFSMMR 240
++ +W+ MV + ++ PNEAI F ++
Sbjct: 501 TLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQ 560
Query: 241 LNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
G+ P+ T+++LL C L LV HG I GL + I + TLL++Y+K G L
Sbjct: 561 ARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLK 619
Query: 301 ASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
+ VF ++ D V TAM++GYA+HG G EA+ + ++PDHV T +L+AC
Sbjct: 620 HAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACC 679
Query: 361 HSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVW 420
H+GL+ +G + + V+G++P ++ Y+C VDL+ R G L+DA + MP EPN+ +W
Sbjct: 680 HAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIW 739
Query: 421 GALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTK 480
G LL A Y+ + +G A +L+ + D N++++SN+Y+A W ++R LMK K
Sbjct: 740 GTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKK 799
Query: 481 VLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQE 526
+ + GCS++E + + FV D SHP D I + + +++E
Sbjct: 800 EMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 181/414 (43%), Gaps = 51/414 (12%)
Query: 43 PRDPLVSTLLVALKSSSSL---YCCRV---IHARVI-KSLDYRDGFIGDQLVSCYLNMGA 95
P +P +T+ L +S+ CR IH+ V+ +S F+ + LVS YL +G
Sbjct: 219 PTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGR 278
Query: 96 TPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS 155
+A LF M +KD VSWN +++G++ + +F + D+ + +T IS++
Sbjct: 279 IEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILP 338
Query: 156 ACALAKAREEGQYVHCCAVKLGMELQ-VKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMV 214
CA G+ +H ++ L+ V N LI+ Y +FG +A+ F M+ ++++
Sbjct: 339 VCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDII 398
Query: 215 SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVI 274
SWN+++ + + + +N + + D T++SLL+ C + V+ VHG
Sbjct: 399 SWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYS 458
Query: 275 FTCGL---DENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHG-- 328
GL +E + LL+ Y+K G + + K+F +S + V+ ++LSGY G
Sbjct: 459 VKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSH 518
Query: 329 -----------------------------CGTEAIQFFERTIREGMEPDHVTFTHLLSAC 359
C EAI F GM P+ VT +LL C
Sbjct: 519 DDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVC 578
Query: 360 SHSG---LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKN 410
+ LV + Y + G + ++D+ +CG L A + ++
Sbjct: 579 AQLASLHLVRQCHGYI-----IRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQS 627
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 150/322 (46%), Gaps = 7/322 (2%)
Query: 54 ALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVS 113
A S S L R +H V K + +++ Y D Q +F +M + D V
Sbjct: 30 ACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVV 89
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCA 173
WN +++G S M F M + + + +TF V+ C G+ +H
Sbjct: 90 WNIVLTGLSVSCGR-ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYI 148
Query: 174 VKLGMELQVKVVNTLINMYGKFGFV-DSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEA 232
+K G+E V N L++MY KFGF+ A+ F + ++++VSWN+++A ++N +A
Sbjct: 149 IKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADA 208
Query: 233 INYFSMMRLNGLFPDEATMVSLLQACETLHLR---RLVEAVHG-VIFTCGLDENITIVTT 288
F +M P+ AT+ ++L C ++ R +H V+ L ++ + +
Sbjct: 209 FRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNS 268
Query: 289 LLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG-MEP 347
L++ Y ++GR+ + +F + D V+ +++GYA + +A Q F + +G + P
Sbjct: 269 LVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSP 328
Query: 348 DHVTFTHLLSACSHSGLVDEGK 369
D VT +L C+ + GK
Sbjct: 329 DSVTIISILPVCAQLTDLASGK 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
F+ V+ ACA G+ +H C KLG +V +++NMY K +D K+F M
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 210 EQNMVSWN-SMVAVCTQNGRPNEAINYFSMMRL-NGLFPDEATMVSLLQACETLHLRRLV 267
+ V WN + + GR E + +F M + P T +L C L
Sbjct: 84 SLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141
Query: 268 EAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC-KVFAEISKPDKVACTAMLSGYAM 326
+++H I GL+++ + L+++Y+K G + F I+ D V+ A+++G++
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 327 HGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
+ +A + F ++E EP++ T ++L C+
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 241 LNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
L+G D + +++AC ++ A+HG +F G + ++LN+Y+K R++
Sbjct: 14 LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD 73
Query: 301 ASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERT-IREGMEPDHVTFTHLLSAC 359
K+F ++ D V +L+G ++ CG E ++FF+ + +P VTF +L C
Sbjct: 74 DCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 360 SHSGLVDEGK 369
G GK
Sbjct: 133 VRLGDSYNGK 142
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 160/419 (38%), Positives = 241/419 (57%), Gaps = 28/419 (6%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL 143
+ L+ YL G +A+ +FD++P KD VSWN ++S ++K+GD+GN S+FS M
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPA 233
Query: 144 ELNELTFISVISACALAKAREEGQYVHCCAVKLGMEL-----QVKVVN--TLINMYGKFG 196
N L G YV+C +KL Q V+ T+I+ Y K G
Sbjct: 234 SWNILI----------------GGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLG 277
Query: 197 FVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMM--RLNGLFPDEATMVSL 254
V SA +LF M++++ + +++M+A TQNG+P +A+ F+ M R + + PDE T+ S+
Sbjct: 278 DVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSV 337
Query: 255 LQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDK 314
+ A L V I G+ + + T+L++LY K G + K+F+ ++K D
Sbjct: 338 VSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDT 397
Query: 315 VACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQV 374
V+ +AM+ G ++G TEA F I + + P+ VTFT LLSA SHSGLV EG F
Sbjct: 398 VSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNS 457
Query: 375 MSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNIS 434
M D + ++P DHY MVD+LGR G L +A ELIK+MP +PN+GVWGALL AS +++N+
Sbjct: 458 MKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVE 516
Query: 435 IGKEAAENLIALDPSDPRNYIM-LSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIE 492
G+ A + + L+ +DP Y+ L+ IYS+ G W DA VR +K K L + GCS++E
Sbjct: 517 FGEIACSHCVKLE-TDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 142/327 (43%), Gaps = 27/327 (8%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
D SW LV S+ + V+ M + + + SV+ AC + +G+ +
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNS-GIPPSSHAVTSVLRACGKMENMVDGKPI 126
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRP 229
H A+K G+ V V L+ +Y + G+++ A K F + E+N VSWNS++ ++G
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 230 NEAINYFSMM------RLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL---- 279
+EA F + N + A + AC L I G
Sbjct: 187 DEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCR 246
Query: 280 -------------DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAM 326
+N T+++ Y+K+G + ++ ++F +SK DK+ AM++ Y
Sbjct: 247 EMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQ 306
Query: 327 HGCGTEAIQFFERTIREG--MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPR 384
+G +A++ F + + ++PD +T + ++SA S G G +++ +G++
Sbjct: 307 NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITE-HGIKID 365
Query: 385 LDHYSCMVDLLGRCGLLNDAKELIKNM 411
+ ++DL + G A ++ N+
Sbjct: 366 DLLSTSLIDLYMKGGDFAKAFKMFSNL 392
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 17/271 (6%)
Query: 215 SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVI 274
SW +V +Q+ + E ++ + M +G+ P + S+L+AC + + +H
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 275 FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAI 334
GL + + T L+ LYS++G + + K F +I++ + V+ ++L GY G EA
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 335 QFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDL 394
+ F++ E D V++ ++S+ + G + F M ++ ++
Sbjct: 191 RVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAMP-----LKSPASWNILIGG 241
Query: 395 LGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNY 454
C + A+ MP + N W ++ Y + + A E + D Y
Sbjct: 242 YVNCREMKLARTYFDAMP-QKNGVSWITMISG---YTKLGDVQSAEELFRLMSKKDKLVY 297
Query: 455 IMLSNIYSASGLWSDAAKVRALMKTKVLARN 485
+ Y+ +G DA K+ A M L RN
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQM----LERN 324
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 249/484 (51%), Gaps = 23/484 (4%)
Query: 52 LVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSC-----YLNMGATPDAQLLFDEM 106
L S SL C V + S +R GF D VS Y G A+ FDEM
Sbjct: 81 FTTLTKSCSLSMC-VYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEM 139
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 166
P++ VSW +L+SG+ + G+L +F M D+ + + + + AR
Sbjct: 140 PHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSAR--- 196
Query: 167 QYVHCCAVKLGMELQVKVV---NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVC 223
+L E+ K V T+I+ Y +D+A KLF AM E+N+VSWN+M+
Sbjct: 197 --------RLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGY 248
Query: 224 TQNGRPNEAINYFSMMR-LNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
QN +P E I F M+ L PD+ T++S+L A L E H + LD+
Sbjct: 249 CQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKK 308
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
+ + T +L++YSK G + + ++F E+ + + AM+ GYA++G A+ F +
Sbjct: 309 VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMI 368
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLN 402
E +PD +T +++AC+H GLV+EG+ +F VM ++ G+ +++HY CMVDLLGR G L
Sbjct: 369 EE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLK 426
Query: 403 DAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYS 462
+A++LI NMPFEPN + + L A Y +I + + + L+P + NY++L N+Y+
Sbjct: 427 EAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYA 486
Query: 463 ASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMS 522
A W D V+ +M+ + GCS IE + F+ D +HP IH L +++
Sbjct: 487 ADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLM 546
Query: 523 KIQE 526
+ E
Sbjct: 547 HMNE 550
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 152/331 (45%), Gaps = 17/331 (5%)
Query: 99 AQLLFDEMPNKD--FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 156
A+ LFD+ P +D F+S NS++ + + + +++ ++ + + TF ++ +
Sbjct: 29 ARKLFDQRPQRDDSFLS-NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKS 87
Query: 157 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSW 216
C+L+ +G +H + G + V +++MY KFG + A F M ++ VSW
Sbjct: 88 CSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSW 147
Query: 217 NSMVAVCTQNGRPNEAINYFSMM-RLNGLFPDEATMVSLLQACETLHLRRLV-EAVHGVI 274
++++ + G + A F M + + A M +++ + RRL E H +
Sbjct: 148 TALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV 207
Query: 275 FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAI 334
T TT+++ Y I ++A+ K+F + + + V+ M+ GY + E I
Sbjct: 208 ITW---------TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGI 258
Query: 335 QFF-ERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVD 393
+ F E ++PD VT +L A S +G + G+ + + ++ + ++D
Sbjct: 259 RLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE-WCHCFVQRKKLDKKVKVCTAILD 317
Query: 394 LLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+ +CG + AK + MP E W A++
Sbjct: 318 MYSKCGEIEKAKRIFDEMP-EKQVASWNAMI 347
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 261/514 (50%), Gaps = 37/514 (7%)
Query: 42 YPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
YP + + +L ++ + +H +K+ D ++ + L+ Y ++G
Sbjct: 43 YPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHK 102
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+FDEMP +D VSWN L+S + G + + VF M + +L+ +E T +S +SAC+ K
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
E G+ ++ V E+ V++ N L++M+ K G +D A +F +M ++N+ W SMV
Sbjct: 163 NLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVF 221
Query: 222 VCTQNGRPNEA-------------------------------INYFSMMRLNGLFPDEAT 250
GR +EA + F M+ G+ PD
Sbjct: 222 GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 251 MVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
+VSLL C + +HG I + + + T L+++Y+K G + + +VF EI
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 311 KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKH 370
+ D + T+++ G AM+G A+ + G+ D +TF +L+AC+H G V EG+
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 371 YFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSG---VWGALLGAS 427
F M++ + VQP+ +H SC++DLL R GLL++A+ELI M E + V+ +LL A+
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAA 461
Query: 428 RVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPG 487
R Y N+ I + AE L ++ SD + +L+++Y+++ W D VR MK + + PG
Sbjct: 462 RNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPG 521
Query: 488 CSFIEHGNKIHRFVVDD--YSHPDSDKIHKKLEE 519
CS IE H F+V D SHP D+I+ L +
Sbjct: 522 CSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQ 555
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 145/306 (47%), Gaps = 26/306 (8%)
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA-- 269
+++ +N M+ + + F +R GL+PD T+ +L++ LR+++E
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIG--RLRKVIEGEK 67
Query: 270 VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC 329
VHG GL+ + + +L+ +Y+ +G++ + KVF E+ + D V+ ++S Y +G
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGR 127
Query: 330 GTEAIQFFERTIRE-GMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY 388
+AI F+R +E ++ D T LSACS ++ G+ ++ + + + R+ +
Sbjct: 128 FEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN- 186
Query: 389 SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGK-EAAENLIALD 447
+VD+ +CG L+ A+ + +M + N W S V+ +S G+ + A L
Sbjct: 187 -ALVDMFCKCGCLDKARAVFDSMR-DKNVKCW-----TSMVFGYVSTGRIDEARVLFERS 239
Query: 448 P-SDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARN--------PGCS---FIEHGN 495
P D + + N Y + +A ++ M+T + + GC+ +E G
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
Query: 496 KIHRFV 501
IH ++
Sbjct: 300 WIHGYI 305
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 240/430 (55%), Gaps = 2/430 (0%)
Query: 66 VIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRG 125
+IH +K+ +D ++ LV Y +G AQ +FDE+P ++ V W L+ G+ K
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 126 DLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVV 185
+F +M+ D L L+ LT I ++ AC A + G+ VH +++ Q +
Sbjct: 190 KDPEVFRLFCLMR-DTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 186 N-TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
++I+MY K +D+A KLF ++N+V W ++++ + R EA + F M +
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
P++ T+ ++L +C +L R ++VHG + G++ + T+ +++Y++ G + +
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
VF + + + ++ ++M++ + ++G EA+ F + + + P+ VTF LLSACSHSG
Sbjct: 369 VFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGN 428
Query: 365 VDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
V EG F+ M+ YGV P +HY+CMVDLLGR G + +AK I NMP +P + WGALL
Sbjct: 429 VKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
Query: 425 GASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLAR 484
A R++ + + E AE L++++P Y++LSNIY+ +G+W VR M K +
Sbjct: 489 SACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRK 548
Query: 485 NPGCSFIEHG 494
+ G S E G
Sbjct: 549 HVGQSATEVG 558
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 187/384 (48%), Gaps = 12/384 (3%)
Query: 50 TLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP-- 107
LL L + +L + +HA+VI + +G L + Y+ A F+ +P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 108 NKDFVSWNSLVSGFSKRGD--LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
++ SWN+++SG+SK + + +++ M+ D ++ + I AC E
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCD-GVDSFNLVFAIKACVGLGLLEN 127
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQ 225
G +H A+K G++ V +L+ MY + G ++SA K+F + +N V W ++ +
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGV-IFTCGLDENIT 284
+ E F +MR GL D T++ L++AC + ++ + VHGV I +D++
Sbjct: 188 YSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY 247
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
+ +++++Y K L+ + K+F + V T ++SG+A EA F + +RE
Sbjct: 248 LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES 307
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLN 402
+ P+ T +L +CS G + GK H + + + G++ +++ +D+ RCG +
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN---GIEMDAVNFTSFIDMYARCGNIQ 364
Query: 403 DAKELIKNMPFEPNSGVWGALLGA 426
A+ + MP E N W +++ A
Sbjct: 365 MARTVFDMMP-ERNVISWSSMINA 387
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 3/186 (1%)
Query: 40 STYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDA 99
S P ++ +LV+ S SL + +H +I++ D + Y G A
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 100 QLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACAL 159
+ +FD MP ++ +SW+S+++ F G + F MKS ++ N +TF+S++SAC+
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQ-NVVPNSVTFVSLLSACSH 425
Query: 160 AKAREEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVS-WN 217
+ +EG + G+ + + ++++ G+ G + A M + M S W
Sbjct: 426 SGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWG 485
Query: 218 SMVAVC 223
++++ C
Sbjct: 486 ALLSAC 491
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 237/435 (54%), Gaps = 10/435 (2%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+H V+K+ + ++ L+ Y+ G +F+++P + V+W SL+SGF
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGME------- 179
+ + F M+S+ ++ NE + ++ AC K G++ H LG +
Sbjct: 189 FSDAIEAFREMQSN-GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKV 247
Query: 180 -LQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSM 238
V + +LI+MY K G + +A LF M E+ +VSWNS++ +QNG EA+ F
Sbjct: 248 GFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLD 307
Query: 239 MRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR 298
M G+ PD+ T +S+++A +L +++H + G ++ IV L+N+Y+K G
Sbjct: 308 MLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGD 367
Query: 299 LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG-MEPDHVTFTHLLS 357
++ K F ++ K D +A T ++ G A HG G EA+ F+R +G PD +T+ +L
Sbjct: 368 AESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLY 427
Query: 358 ACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNS 417
ACSH GLV+EG+ YF M D++G++P ++HY CMVD+L R G +A+ L+K MP +PN
Sbjct: 428 ACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNV 487
Query: 418 GVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALM 477
+WGALL ++ N+ + + + Y++LSNIY+ +G W+D +R M
Sbjct: 488 NIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESM 547
Query: 478 KTKVLARNPGCSFIE 492
K+K + + G S +E
Sbjct: 548 KSKRVDKVLGHSSVE 562
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 156/331 (47%), Gaps = 14/331 (4%)
Query: 51 LLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLV----SCYLNMGATPDAQLLFDEM 106
+L L++ SL +H +IKS R+ +L+ +C M + A+ +F+ +
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSY-ARSVFESI 67
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 166
WNS++ G+S + + + M + TF V+ AC+ + + G
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRK-GYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 167 QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
VH VK G E+ + V L++MY G V+ ++F + + N+V+W S+++ N
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE----- 281
R ++AI F M+ NG+ +E MV LL AC + HG + G D
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 282 ---NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
N+ + T+L+++Y+K G L + +F + + V+ ++++GY+ +G EA+ F
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
+ G+ PD VTF ++ A G G+
Sbjct: 307 DMLDLGIAPDKVTFLSVIRASMIQGCSQLGQ 337
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
WNSM+ + + P++A+ ++ M G PD T +L+AC L + VHG +
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
G + N+ + T LL++Y G +N +VF +I + + VA +++SG+ + ++AI+
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH-------- 387
F G++ + LL AC + GK +F G P
Sbjct: 195 AFREMQSNGVKANETIMVDLLVACGRCKDIVTGK-WFHGFLQGLGFDPYFQSKVGFNVIL 253
Query: 388 YSCMVDLLGRCGLLNDAKELIKNMP 412
+ ++D+ +CG L A+ L MP
Sbjct: 254 ATSLIDMYAKCGDLRTARYLFDGMP 278
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 246/441 (55%), Gaps = 4/441 (0%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
LV Y G D + + + +++ V+WNSL+S ++ RG + + +F M + ++
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQ-RIKP 403
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF 205
+ T S ISAC A G+ +H ++ + + V N+LI+MY K G VDSA +F
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVF 462
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRR 265
+ +++V+WNSM+ +QNG EAI+ F M + L +E T ++++QAC ++
Sbjct: 463 NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
Query: 266 LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYA 325
+ VH + GL + T T L+++Y+K G LNA+ VF +S V+ ++M++ Y
Sbjct: 523 KGKWVHHKLIISGLKDLFTD-TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYG 581
Query: 326 MHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRL 385
MHG AI F + + G +P+ V F ++LSAC HSG V+EGK+YF +M +GV P
Sbjct: 582 MHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNS 640
Query: 386 DHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIA 445
+H++C +DLL R G L +A IK MPF ++ VWG+L+ R++ + I K +L
Sbjct: 641 EHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSD 700
Query: 446 LDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDY 505
+ D Y +LSNIY+ G W + ++R+ MK+ L + PG S IE K+ RF +
Sbjct: 701 IVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEE 760
Query: 506 SHPDSDKIHKKLEEVMSKIQE 526
+ +D+I++ L + + E
Sbjct: 761 NRIQTDEIYRFLGNLQNLTNE 781
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 235/494 (47%), Gaps = 49/494 (9%)
Query: 55 LKSSSSLYCCRVIHARV-IKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVS 113
+S SSL +HA + + RD +L+ Y MG+ ++L+F+ P D
Sbjct: 8 FRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFM 67
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE---GQYVH 170
+ L+ L + ++ + S+ ++++ F SV+ ACA +RE G VH
Sbjct: 68 YGVLIKCNVWCHLLDAAIDLYHRLVSETT-QISKFVFPSVLRACA--GSREHLSVGGKVH 124
Query: 171 CCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPN 230
+K G++ + +L+ MYG+ G + A K+F M +++V+W+++V+ C +NG
Sbjct: 125 GRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVV 184
Query: 231 EAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLL 290
+A+ F M +G+ PD TM+S+++ C L R+ +VHG I D + T+ +LL
Sbjct: 185 KALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLL 244
Query: 291 NLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHV 350
+YSK G L +S ++F +I+K + V+ TAM+S Y +A++ F I+ G+EP+ V
Sbjct: 245 TMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLV 304
Query: 351 TFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYS-CMVDLLGRCGLLNDAKEL 407
T +LS+C GL+ EGK H F V + + P + S +V+L CG L+D + +
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRE---LDPNYESLSLALVELYAECGKLSDCETV 361
Query: 408 IK----------------------------------NMPFEPNSGVWGALLGASRVYHNI 433
++ +P++ + + A +
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Query: 434 SIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTK--VLARNPGCSFI 491
+GK+ ++I D SD L ++YS SG A+ V +K + V + C F
Sbjct: 422 PLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 492 EHGNKIHRFVVDDY 505
++GN + + DY
Sbjct: 482 QNGNSVEAISLFDY 495
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 164/326 (50%), Gaps = 27/326 (8%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
+ IH VI++ D D F+ + L+ Y G+ A +F+++ ++ V+WNS++ GFS+
Sbjct: 425 KQIHGHVIRT-DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G+ +S+F M LE+NE+TF++VI AC+ + E+G++VH + G++ +
Sbjct: 484 GNSVEAISLFDYMYHSY-LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFT 541
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
LI+MY K G +++A +F AM+ +++VSW+SM+ +GR AI+ F+ M +G
Sbjct: 542 DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT 601
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVH--GVIFTCGLDENITIVTTLLNLYSKIGRLNAS 302
P+E +++L AC H + E + ++ + G+ N ++L S+ G L +
Sbjct: 602 KPNEVVFMNVLSACG--HSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEA 659
Query: 303 CKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHS 362
+ E+ A + G ++GC + I+ + S
Sbjct: 660 YRTIKEM----PFLADASVWGSLVNGCRIHQKMDIIKAIKNDL----------------S 699
Query: 363 GLVDEGKHYFQVMSDVYGVQPRLDHY 388
+V + Y+ ++S++Y + + +
Sbjct: 700 DIVTDDTGYYTLLSNIYAEEGEWEEF 725
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/361 (36%), Positives = 217/361 (60%), Gaps = 6/361 (1%)
Query: 171 CCAVKLGMEL---QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNG 227
CCA ++ E+ V V N +I Y + G + +A +LF +M +N+ SW ++++ +QNG
Sbjct: 134 CCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNG 193
Query: 228 RPNEAINYF-SMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIV 286
+EA+ F M + + P+ T+VS+L AC L + + G G +NI +
Sbjct: 194 NYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVC 253
Query: 287 TTLLNLYSKIGRLNASCKVFAEISKPDKV-ACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
+ +YSK G ++ + ++F E+ + + +M+ A HG EA+ F + +REG
Sbjct: 254 NATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGE 313
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
+PD VTF LL AC H G+V +G+ F+ M +V+ + P+L+HY CM+DLLGR G L +A
Sbjct: 314 KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAY 373
Query: 406 ELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASG 465
+LIK MP +P++ VWG LLGA + N+ I + A+E L L+P++P N +++SNIY+A+
Sbjct: 374 DLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANE 433
Query: 466 LWSDAAKVRALMKTKVLARNPGCS-FIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKI 524
W ++R LMK + + + G S F+E G +H+F V+D SHP S +I++ LEE+ ++
Sbjct: 434 KWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRM 493
Query: 525 Q 525
+
Sbjct: 494 K 494
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 19/289 (6%)
Query: 49 STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPN 108
+TL+ A +L C R RV + RD + + +++ Y G A LFD MP
Sbjct: 121 TTLITAYAKLGALCCAR----RVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 109 KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQY 168
K+ SW +++SGFS+ G+ + +F M+ D ++ N +T +SV+ ACA E G+
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 169 VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ-NMVSWNSMVAVCTQNG 227
+ A + G + V N I MY K G +D A +LF + Q N+ SWNSM+ +G
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 228 RPNEAINYFSMMRLNGLFPDEATMVSLLQAC-------ETLHLRRLVEAVHGVIFTCGLD 280
+ +EA+ F+ M G PD T V LL AC + L + +E VH +
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI------S 350
Query: 281 ENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHG 328
+ +++L ++G+L + + + KPD V +L + HG
Sbjct: 351 PKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
+N ++ + +P+E+I ++++ +GL P T + A + R + +H F
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
G + + TTL+ Y+K+G L + +VF E+SK D AM++GY G A++
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 336 FFERTIREG--------------------------------MEPDHVTFTHLLSACSHSG 363
F+ R+ ++P+H+T +L AC++ G
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGAL 423
++ G+ + + G + + +++ +CG+++ AK L + + + N W ++
Sbjct: 230 ELEIGRR-LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSM 288
Query: 424 LGA 426
+G+
Sbjct: 289 IGS 291
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 260/463 (56%), Gaps = 21/463 (4%)
Query: 69 ARVIKSLDYRDGF-----IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSK 123
AR I L + G+ +G+ L+S Y G + +F +M ++ VSW +++S S
Sbjct: 295 ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--SN 352
Query: 124 RGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVK 183
+ D +S+F M+ D + NE+TF+ +I+A + +EG +H +K G +
Sbjct: 353 KDD---AVSIFLNMRFD-GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG 243
V N+ I +Y KF ++ A K F +T + ++SWN+M++ QNG +EA+ F +
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF-LSAAAE 467
Query: 244 LFPDEATMVSLLQA---CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
P+E T S+L A E + +++ + H + GL+ + + LL++Y+K G ++
Sbjct: 468 TMPNEYTFGSVLNAIAFAEDISVKQ-GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNID 526
Query: 301 ASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
S KVF E+S+ ++ T+++S Y+ HG + F + I+E + PD VTF +L+AC+
Sbjct: 527 ESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN 586
Query: 361 HSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVW 420
G+VD+G F +M +VY ++P +HYSCMVD+LGR G L +A+EL+ +P P +
Sbjct: 587 RKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESML 646
Query: 421 GALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTK 480
++LG+ R++ N+ +G + AE + + P +Y+ + NIY+ W AA++R M+ K
Sbjct: 647 QSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKK 706
Query: 481 VLARNPGCSFIEHGN-----KIHRFVVDDYSHPDSDKIHKKLE 518
+++ G S+I+ G+ + F D SHP SD+I++ +E
Sbjct: 707 NVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVE 749
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 192/374 (51%), Gaps = 34/374 (9%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+ + V+K+ D +G+ ++ Y G+ A+ +FDEM KD +SWNSL+SG S+ G
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 127 LG-NCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVV 185
G + +F M + +EL+ ++F SVI+ C + + +H +K G E ++V
Sbjct: 256 FGFEAVVIFRDMMRE-GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
N L++ Y K G +++ +F M+E+N+VSW +M++ ++A++ F MR +G++
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVY 369
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
P+E T V L+ A + + +HG+ G ++ + + LY+K L + K
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS----- 360
F +I+ + ++ AM+SG+A +G EA++ F E M P+ TF +L+A +
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDI 488
Query: 361 --------HSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP 412
H+ L+ G + V+S S ++D+ + G +++++++ M
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVS------------SALLDMYAKRGNIDESEKVFNEMS 536
Query: 413 FEPNSGVWGALLGA 426
+ N VW +++ A
Sbjct: 537 -QKNQFVWTSIISA 549
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 153/300 (51%), Gaps = 8/300 (2%)
Query: 33 SVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLN 92
++RF + YP + L+ A+K + + IH IK+ + +G+ ++ Y
Sbjct: 362 NMRFDGV--YPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 419
Query: 93 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 152
A DA+ F+++ ++ +SWN+++SGF++ G + +F + + + NE TF S
Sbjct: 420 FEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGS 477
Query: 153 VISACALAK--AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE 210
V++A A A+ + ++GQ H +KLG+ V + L++MY K G +D + K+F M++
Sbjct: 478 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 537
Query: 211 QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHL-RRLVEA 269
+N W S+++ + +G +N F M + PD T +S+L AC + + E
Sbjct: 538 KNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEI 597
Query: 270 VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI-SKPDKVACTAMLSGYAMHG 328
+ +I L+ + + ++++ + GRL + ++ +E+ P + +ML +HG
Sbjct: 598 FNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHG 657
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 158/334 (47%), Gaps = 13/334 (3%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
+ + ++ Y G +A +F+ + + D VSWN+++SGF D F V
Sbjct: 113 VSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF----DDNQIALNFVVRMKSA 168
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
+ + T+ + +S C ++ G + VK G+E + V N+ I MY + G A
Sbjct: 169 GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGA 228
Query: 202 FKLFWAMTEQNMVSWNSMVAVCTQNGRPN-EAINYFSMMRLNGLFPDEATMVSLLQACET 260
++F M+ ++M+SWNS+++ +Q G EA+ F M G+ D + S++ C
Sbjct: 229 RRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Query: 261 LHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAM 320
+L +HG+ G + + + L++ YSK G L A VF ++S+ + V+ T M
Sbjct: 289 ETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTM 348
Query: 321 LSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEG-KHYFQVMSDVY 379
+S +A+ F +G+ P+ VTF L++A + + EG K + + +
Sbjct: 349 ISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGF 403
Query: 380 GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPF 413
+P + + + L + L DAK+ +++ F
Sbjct: 404 VSEPSVGN--SFITLYAKFEALEDAKKAFEDITF 435
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 155/337 (45%), Gaps = 17/337 (5%)
Query: 99 AQLLFDEMPNKD-FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL-----ELNELTFIS 152
A LFD ++ S N +S +R +S+F K +L L ++E+T
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIF---KENLQLGYFGRHMDEVTLCL 83
Query: 153 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQN 212
+ AC R G +H + G V V N ++ MY K G D+A +F + + +
Sbjct: 84 ALKACRGDLKR--GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
+VSWN++++ N A+N+ M+ G+ D T + L C L +
Sbjct: 142 VVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 198
Query: 273 VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC-GT 331
+ GL+ ++ + + + +YS+ G + +VF E+S D ++ ++LSG + G G
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGF 258
Query: 332 EAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCM 391
EA+ F +REG+E DHV+FT +++ C H + + + G + L+ + +
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQ-IHGLCIKRGYESLLEVGNIL 317
Query: 392 VDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASR 428
+ +CG+L K + M E N W ++ +++
Sbjct: 318 MSRYSKCGVLEAVKSVFHQMS-ERNVVSWTTMISSNK 353
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 228/413 (55%), Gaps = 7/413 (1%)
Query: 81 FIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD 140
F LV Y G +A+ +F+ + ++D V WN+LVS + G + + +M SD
Sbjct: 178 FPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSD 237
Query: 141 LD-LELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ + TF S++SAC + E+G+ +H K+ + + V L+NMY K +
Sbjct: 238 KNRFRGDYFTFSSLLSACRI----EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLS 293
Query: 200 SAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACE 259
A + F +M +N+VSWN+M+ QNG EA+ F M L L PDE T S+L +C
Sbjct: 294 DARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCA 353
Query: 260 TLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTA 319
++ V ++ G + +++ +L++ YS+ G L+ + F I +PD V+ T+
Sbjct: 354 KFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTS 413
Query: 320 MLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVY 379
++ A HG E++Q FE +++ ++PD +TF +LSACSH GLV EG F+ M++ Y
Sbjct: 414 VIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFY 472
Query: 380 GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEA 439
++ +HY+C++DLLGR G +++A +++ +MP EP++ A G ++ K
Sbjct: 473 KIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWG 532
Query: 440 AENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVL-ARNPGCSFI 491
A+ L+ ++P+ P NY +LSN Y + G W+ AA +R + + PGCS++
Sbjct: 533 AKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 186/365 (50%), Gaps = 12/365 (3%)
Query: 68 HARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR-GD 126
H ++K Y F+ ++L+ Y + DA LFDEMP ++ V+WN L+ G +R GD
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 127 LGNCMSV-FSVMKSDL--DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVK 183
+ + F + L D+ L+ ++F+ +I C + + G +HC VK G+E
Sbjct: 119 TNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCF 178
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMM--RL 241
+L++ YGK G + A ++F A+ ++++V WN++V+ NG +EA +M
Sbjct: 179 PSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDK 238
Query: 242 NGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNA 301
N D T SLL AC ++ +H ++F +I + T LLN+Y+K L+
Sbjct: 239 NRFRGDYFTFSSLLSACRIEQGKQ----IHAILFKVSYQFDIPVATALLNMYAKSNHLSD 294
Query: 302 SCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSH 361
+ + F + + V+ AM+ G+A +G G EA++ F + + E ++PD +TF +LS+C+
Sbjct: 295 ARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAK 354
Query: 362 SGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWG 421
+ E K Q M G L + ++ R G L++A ++ EP+ W
Sbjct: 355 FSAIWEIKQ-VQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWT 412
Query: 422 ALLGA 426
+++GA
Sbjct: 413 SVIGA 417
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/494 (31%), Positives = 258/494 (52%), Gaps = 35/494 (7%)
Query: 59 SSLYCCRVIHARVIKSLDYRDGFIGDQLVS-CYLNMGATPDAQLLFDEMPNKDFVSWNSL 117
S++ + IHA +IK+ D ++++ C + A L+F + +K+ WN++
Sbjct: 36 STMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTI 95
Query: 118 VSGFSKRGDLGNCMSVF-SVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKL 176
+ GFS+ +S+F ++ S ++ LT+ SV A +G+ +H +K
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 177 GMELQVKVVNTLINMY-------------------------------GKFGFVDSAFKLF 205
G+E + NT+++MY K G +D A LF
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRR 265
M ++N VSWNSM++ +NGR +A++ F M+ + PD TMVSLL AC L
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASE 275
Query: 266 LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVAC-TAMLSGY 324
+H I + N +VT L+++Y K G + VF E + +++C +M+ G
Sbjct: 276 QGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF-ECAPKKQLSCWNSMILGL 334
Query: 325 AMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPR 384
A +G A+ F R G+EPD V+F +L+AC+HSG V +F++M + Y ++P
Sbjct: 335 ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPS 394
Query: 385 LDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLI 444
+ HY+ MV++LG GLL +A+ LIKNMP E ++ +W +LL A R N+ + K AA+ L
Sbjct: 395 IKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLK 454
Query: 445 ALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDD 504
LDP + Y++LSN Y++ GL+ +A + R LMK + + + GCS IE ++H F+
Sbjct: 455 KLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCG 514
Query: 505 YSHPDSDKIHKKLE 518
+HP S +I+ L+
Sbjct: 515 GTHPKSAEIYSLLD 528
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 246/457 (53%), Gaps = 13/457 (2%)
Query: 52 LVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPD---AQLLFDEMPN 108
L+ LK SS+ IH ++ S D FI +LV ++ D A+ L +
Sbjct: 17 LIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVS-SLSLAKDLAFARTLLLHSSD 75
Query: 109 KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQY 168
+WN L G+S + V+S MK ++ N+LTF ++ ACA G+
Sbjct: 76 STPSTWNMLSRGYSSSDSPVESIWVYSEMKRR-GIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 169 VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGR 228
+ +K G + V V N LI++YG A K+F MTE+N+VSWNS++ +NG+
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 229 PNEAINYFSMMRLNGLFPDEATMVSLLQACE-TLHLRRLVEAVHGVIFTCGLDENITIVT 287
N F M PDE TMV LL AC L L +LV H + L+ N + T
Sbjct: 195 LNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLV---HSQVMVRELELNCRLGT 251
Query: 288 TLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG-ME 346
L+++Y+K G L + VF + + +AM+ G A +G EA+Q F + ++E +
Sbjct: 252 ALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 347 PDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKE 406
P++VTF +L ACSH+GLVD+G YF M ++ ++P + HY MVD+LGR G LN+A +
Sbjct: 312 PNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYD 371
Query: 407 LIKNMPFEPNSGVWGALLGASRVYH---NISIGKEAAENLIALDPSDPRNYIMLSNIYSA 463
IK MPFEP++ VW LL A ++H + IG++ + LI L+P N ++++N ++
Sbjct: 372 FIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAE 431
Query: 464 SGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRF 500
+ +W++AA+VR +MK + + G S +E G HRF
Sbjct: 432 ARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRF 468
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 142/334 (42%), Gaps = 50/334 (14%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIK-SLDYRDGFIGDQLVSCYLNMGATPDAQL 101
P LL A S L R I V+K D+ D ++G+ L+ Y T DA+
Sbjct: 111 PNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDF-DVYVGNNLIHLYGTCKKTSDARK 169
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+FDEM ++ VSWNS+++ + G L F M +E T + ++SAC
Sbjct: 170 VFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGK-RFCPDETTMVVLLSAC--GG 226
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
G+ VH + +EL ++ L++MY K G ++ A +F M ++N+ +W++M+
Sbjct: 227 NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIV 286
Query: 222 VCTQNGRPNEAINYFS-MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLD 280
Q G EA+ FS MM+ + + P+ T + +L AC
Sbjct: 287 GLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC---------------------- 324
Query: 281 ENITIVTTLLNLYSKIGRLNASCKVFAEIS-----KPDKVACTAMLSGYAMHGCGTEAIQ 335
S G ++ K F E+ KP + AM+ G EA
Sbjct: 325 -------------SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYD 371
Query: 336 FFERTIREGMEPDHVTFTHLLSACS-HSGLVDEG 368
F ++ EPD V + LLSACS H DEG
Sbjct: 372 FIKKM---PFEPDAVVWRTLLSACSIHHDEDDEG 402
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 263/498 (52%), Gaps = 16/498 (3%)
Query: 50 TLLVALKSSSSLYCC---RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
T L+A + S+L R H V K+ I + L+ Y G+ + +F M
Sbjct: 320 TYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSM 379
Query: 107 PNKDFVSWNSLVSGFSKRG-DLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
+D VSWN+++S F + G D M V+ + K ++ +T +++SA + + +E
Sbjct: 380 RERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDY--ITVTALLSAASNLRNKEI 437
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWA--MTEQNMVSWNSMVAVC 223
G+ H ++ G++ + + + LI+MY K G + + KLF E++ +WNSM++
Sbjct: 438 GKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGY 496
Query: 224 TQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENI 283
TQNG + F M + P+ T+ S+L AC + L + +HG LD+N+
Sbjct: 497 TQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNV 556
Query: 284 TIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE 343
+ + L+++YSK G + + +F++ + + V T M+ GY HG G AI F
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES 616
Query: 344 GMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLND 403
G++PD +TF +LSACS+SGL+DEG F+ M +VY +QP +HY C+ D+LGR G +N+
Sbjct: 617 GIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNE 676
Query: 404 AKELIKNMPFEPN-SGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNY----IMLS 458
A E +K + E N + +WG+LLG+ +++ + + + +E L D +N+ ++LS
Sbjct: 677 AYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKG--KNFSGYEVLLS 734
Query: 459 NIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLE 518
N+Y+ W KVR M+ K L + G S IE ++ FV D HP S +I+ ++
Sbjct: 735 NMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVID 794
Query: 519 EVMSKIQEFGFVSETESI 536
+ ++ F++ ++
Sbjct: 795 GLAKDMRGDSFLTTLPTV 812
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 206/438 (47%), Gaps = 24/438 (5%)
Query: 54 ALKSSSSLYCCRVIHARVIKSLD--YRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDF 111
A+ S S+ V + ++K D +D F+ +S Y +G ++ +FD ++
Sbjct: 223 AVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNI 282
Query: 112 VSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHC 171
WN+++ + + L + +F ++ +E+T++ SA + + E G+ H
Sbjct: 283 EVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHG 342
Query: 172 CAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNE 231
K EL + +VN+L+ MY + G V +F +F +M E+++VSWN+M++ QNG +E
Sbjct: 343 FVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDE 402
Query: 232 AINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLD-ENITIVTTLL 290
+ M+ G D T+ +LL A L + + + H + G+ E + + L+
Sbjct: 403 GLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMN--SYLI 460
Query: 291 NLYSKIGRLNASCKVF--AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPD 348
++YSK G + S K+F + ++ D+ +M+SGY +G + F + + + + P+
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPN 520
Query: 349 HVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH----YSCMVDLLGRCGLLNDA 404
VT +L ACS G VD GK + ++ LD S +VD+ + G + A
Sbjct: 521 AVTVASILPACSQIGSVDLGKQLHG-----FSIRQYLDQNVFVASALVDMYSKAGAIKYA 575
Query: 405 KELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPS----DPRNYIMLSNI 460
+++ E NS + ++ Y +G+ A +++ S D ++ + +
Sbjct: 576 EDMFSQTK-ERNSVTYTTMILG---YGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
Query: 461 YSASGLWSDAAKVRALMK 478
S SGL + K+ M+
Sbjct: 632 CSYSGLIDEGLKIFEEMR 649
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 194/391 (49%), Gaps = 19/391 (4%)
Query: 49 STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPD------AQLL 102
S+ L A + +L + +H +I+ L + + L++ Y++ PD + +
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD M K+ V+WN+L+S + K G F +M ++++ + ++F++V A +++++
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMR-MEVKPSPVSFVNVFPAVSISRS 229
Query: 163 REEGQYVHCCAVKLGMEL--QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV 220
++ + +KLG E + VV++ I+MY + G ++S+ ++F + E+N+ WN+M+
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 221 AVCTQNGRPNEAINYF-SMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL 279
V QN E+I F + + DE T + A L L HG +
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFER 339
+ I IV +L+ +YS+ G ++ S VF + + D V+ M+S + +G E +
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYE 409
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQ-PRLDHYSCMVDLLG 396
++G + D++T T LLSA S+ + GK H F + G+Q ++ Y ++D+
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ---GIQFEGMNSY--LIDMYS 464
Query: 397 RCGLLNDAKELIKNMPF-EPNSGVWGALLGA 426
+ GL+ +++L + + E + W +++
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATWNSMISG 495
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 145/312 (46%), Gaps = 13/312 (4%)
Query: 99 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL-ELNELTFISVISAC 157
A+ LFD +P V WN+++ GF + +S MK + T+ S + AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK-------FGFVDSAFKLFWAMTE 210
A K + G+ VHC ++ V N+L+NMY F + D K+F M
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEY-DVVRKVFDNMRR 176
Query: 211 QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAV 270
+N+V+WN++++ + GR EA F +M + P + V++ A +
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVF 236
Query: 271 HGVIFTCGLD--ENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHG 328
+G++ G + +++ +V++ +++Y+++G + +S +VF + + M+ Y +
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 329 CGTEAIQFFERTI-REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH 387
C E+I+ F I + + D VT+ SA S V+ G+ + +S + P +
Sbjct: 297 CLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIV 356
Query: 388 YSCMVDLLGRCG 399
S MV + RCG
Sbjct: 357 NSLMV-MYSRCG 367
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/453 (32%), Positives = 243/453 (53%), Gaps = 8/453 (1%)
Query: 42 YPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
+P ++S L+ L + + H VI+ D + + L+S Y A+
Sbjct: 328 HPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEK 387
Query: 102 LF---DEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 158
LF E NK+ +WN+++ G+ K C+ +F ++ +L +E++ + SVIS+C+
Sbjct: 388 LFCRISEEGNKE--AWNTMLKGYGKMKCHVKCIELFRKIQ-NLGIEIDSASATSVISSCS 444
Query: 159 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNS 218
A G+ +HC VK ++L + VVN+LI++YGK G + A+++F + N+++WN+
Sbjct: 445 HIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNA 503
Query: 219 MVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCG 278
M+A + +AI F M P T+V+LL AC + +H I
Sbjct: 504 MIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETE 563
Query: 279 LDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
+ N+++ L+++Y+K G L S ++F ++ D V M+SGY MHG AI F+
Sbjct: 564 HEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFD 623
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC 398
+ ++P TF LLSAC+H+GLV++GK F M Y V+P L HYSC+VDLL R
Sbjct: 624 QMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRS 682
Query: 399 GLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLS 458
G L +A+ + +MPF P+ +WG LL + + +G AE +A DP + YIML+
Sbjct: 683 GNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLA 742
Query: 459 NIYSASGLWSDAAKVRALMKTKVLARNPGCSFI 491
N+YSA+G W +A + R +M+ + + G S +
Sbjct: 743 NMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 206/446 (46%), Gaps = 40/446 (8%)
Query: 67 IHARVIKSLDY-RDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRG 125
+H V+K + R+ +G V Y G DA L+FDEMP++D V+W +++SG + G
Sbjct: 147 VHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNG 206
Query: 126 DLGNCMSVFSVMKS---DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQV 182
+ + M S D+D + N T AC+ A +EG+ +H AVK G+
Sbjct: 207 ESEGGLGYLCKMHSAGSDVD-KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSK 265
Query: 183 KVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLN 242
V +++ + Y K G A+ F + +++M SW S++A ++G E+ + F M+
Sbjct: 266 FVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNK 325
Query: 243 GLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNAS 302
G+ PD + L+ + L +A HG + + T+ +LL++Y K L+ +
Sbjct: 326 GMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVA 385
Query: 303 CKVFAEISKP-DKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSH 361
K+F IS+ +K A ML GY C + I+ F + G+E D + T ++S+CSH
Sbjct: 386 EKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSH 445
Query: 362 SGLVDEGKHYFQVMSDVYGVQPRLDH----YSCMVDLLGRCGLLNDAKELIKNMPFEPNS 417
G V GK Y V+ LD + ++DL G+ G L A + + N
Sbjct: 446 IGAVLLGKSL-----HCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA--DTNV 498
Query: 418 GVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALM 477
W A++ AS V+ E +E IAL M+S + S + L+
Sbjct: 499 ITWNAMI-ASYVH------CEQSEKAIALFDR------MVSENFKPSSI--------TLV 537
Query: 478 KTKVLARNPGCSFIEHGNKIHRFVVD 503
+ N G +E G IHR++ +
Sbjct: 538 TLLMACVNTGS--LERGQMIHRYITE 561
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 182/378 (48%), Gaps = 7/378 (1%)
Query: 35 RFHSISTYPRDPLVSTLLVALKSSSSLYCC---RVIHARVIKSLDYRDGFIGDQLVSCYL 91
+ HS + P TL ++ S+L R +H +K+ F+ + S Y
Sbjct: 217 KMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYS 276
Query: 92 NMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFI 151
G +A L F E+ ++D SW S+++ ++ GD+ +F M++ + + +
Sbjct: 277 KSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNK-GMHPDGVVIS 335
Query: 152 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
+I+ +G+ H ++ L V N+L++MY KF + A KLF ++E+
Sbjct: 336 CLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEE 395
Query: 212 -NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAV 270
N +WN+M+ + + I F ++ G+ D A+ S++ +C + L +++
Sbjct: 396 GNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL 455
Query: 271 HGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCG 330
H + LD I++V +L++LY K+G L + ++F E + + + AM++ Y
Sbjct: 456 HCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQS 514
Query: 331 TEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC 390
+AI F+R + E +P +T LL AC ++G ++ G+ + +++ + L +
Sbjct: 515 EKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAA 573
Query: 391 MVDLLGRCGLLNDAKELI 408
++D+ +CG L ++EL
Sbjct: 574 LIDMYAKCGHLEKSRELF 591
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 160/377 (42%), Gaps = 18/377 (4%)
Query: 58 SSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSL 117
S SL R +A +I + F+ +L+S Y + G + +F + +D WNS+
Sbjct: 37 SLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSI 96
Query: 118 VSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKL- 176
+ GD + F M + T V+SACA G +VH +K
Sbjct: 97 IKAHFSNGDYARSLCFFFSMLLS-GQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG 155
Query: 177 GMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYF 236
G + V + + Y K GF+ A +F M ++++V+W ++++ QNG + Y
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 237 SMMRLNGL---FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLY 293
M G P+ T+ QAC L + +HG GL + + +++ + Y
Sbjct: 216 CKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFY 275
Query: 294 SKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFT 353
SK G + + F E+ D + T++++ A G E+ F +GM PD V +
Sbjct: 276 SKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVIS 335
Query: 354 HLLSACSHSGLVDEGKHYFQVMSDVYGVQPR----LDHYSC--MVDLLGRCGLLNDAKEL 407
L++ LV +GK + +G R LD C ++ + + LL+ A++L
Sbjct: 336 CLINELGKMMLVPQGKAF-------HGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL 388
Query: 408 IKNMPFEPNSGVWGALL 424
+ E N W +L
Sbjct: 389 FCRISEEGNKEAWNTML 405
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 16/180 (8%)
Query: 252 VSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK 311
+S++ ++L L L + + +I T GL ENI + + L++ Y+ G+ N S +VF +++
Sbjct: 29 ISVILCDQSLSLESLRKH-NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTR 87
Query: 312 PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHY 371
D +++ + +G ++ FF + G PDH T ++SAC+ +
Sbjct: 88 RDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAE-------LLW 140
Query: 372 FQVMSDVYGVQPRLDHY-------SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
F V + V+G+ + + + V +CG L DA + MP + + W A++
Sbjct: 141 FHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAII 199
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 226/432 (52%), Gaps = 11/432 (2%)
Query: 93 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 152
MG A +F EM K+ V W S+++G+ DL + F + + D+ L
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD-LSPERDIVLWNTMISG 99
Query: 153 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQN 212
I + +AR + C V NT++ Y G +++ ++F M E+N
Sbjct: 100 YIEMGNMLEARSLFDQMPC--------RDVMSWNTVLEGYANIGDMEACERVFDDMPERN 151
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNG-LFPDEATMVSLLQACETLHLRRLVEAVH 271
+ SWN ++ QNGR +E + F M G + P++ATM +L AC L + VH
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 272 GVIFTCGLDE-NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCG 330
T G ++ ++ + L+++Y K G + + +VF I + D ++ M++G A HG G
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 331 TEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC 390
TEA+ F G+ PD VTF +L AC H GLV++G YF M + + P ++H C
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC 331
Query: 391 MVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSD 450
+VDLL R G L A E I MP + ++ +W LLGAS+VY + IG+ A E LI L+P +
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRN 391
Query: 451 PRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDS 510
P N++MLSNIY +G + DAA+++ M+ + G S+IE + + +F HP +
Sbjct: 392 PANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRT 451
Query: 511 DKIHKKLEEVMS 522
+++ + L E+ S
Sbjct: 452 EELQRILRELKS 463
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 167/347 (48%), Gaps = 41/347 (11%)
Query: 78 RDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM 137
RD + ++ Y N+G + +FD+MP ++ SWN L+ G+++ G + + F M
Sbjct: 119 RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRM 178
Query: 138 KSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGM-ELQVKVVNTLINMYGKFG 196
+ + N+ T V+SACA A + G++VH LG ++ V V N LI+MYGK G
Sbjct: 179 VDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCG 238
Query: 197 FVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
++ A ++F + ++++SWN+M+ +G EA+N F M+ +G+ PD+ T V +L
Sbjct: 239 AIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLC 298
Query: 257 ACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVA 316
AC+ + L +++ + ++ +S + P+
Sbjct: 299 ACKHMGL---------------VEDGLAYFNSMFTDFSIM---------------PEIEH 328
Query: 317 CTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS 376
C ++ + G T+A++F + ++ D V + LL A VD G+ +
Sbjct: 329 CGCVVDLLSRAGFLTQAVEFINKM---PVKADAVIWATLLGASKVYKKVDIGE---VALE 382
Query: 377 DVYGVQPR-LDHYSCMVDLLGRCGLLNDAKEL---IKNMPFEPNSGV 419
++ ++PR ++ + ++ G G +DA L +++ F+ +GV
Sbjct: 383 ELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGV 429
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 155 SACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMV 214
S+ +A++RE + C L L M G + SA K+F M E+N+V
Sbjct: 8 SSLLVAESRELITHAKCSTESLNQMF-------LFGMLCLMGVIASANKVFCEMVEKNVV 60
Query: 215 SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVI 274
W SM+ N A YF + + + ++ L R L + +
Sbjct: 61 LWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM---- 116
Query: 275 FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAI 334
C ++ T+L Y+ IG + A +VF ++ + + + ++ GYA +G +E +
Sbjct: 117 -PC---RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVL 172
Query: 335 QFFERTIREG-MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVD 393
F+R + EG + P+ T T +LSAC+ G D GK + + + ++ + ++D
Sbjct: 173 GSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALID 232
Query: 394 LLGRCGLLNDAKELIKNM 411
+ G+CG + A E+ K +
Sbjct: 233 MYGKCGAIEIAMEVFKGI 250
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 250/477 (52%), Gaps = 5/477 (1%)
Query: 45 DPLVSTLLVALKSSSSLYCC---RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
+P +L VA+ + S L + IH + +K D ++ LV Y A+
Sbjct: 205 EPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVARE 264
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+F +MP K V+WNS++ G+ +GD +C+ + + M + ++ T S++ AC+ ++
Sbjct: 265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE-GTRPSQTTLTSILMACSRSR 323
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
G+++H ++ + + V +LI++Y K G + A +F + SWN M++
Sbjct: 324 NLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMIS 383
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
G +A+ + M G+ PD T S+L AC L + +H I L+
Sbjct: 384 SYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLET 443
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
+ +++ LL++YSK G + ++F I K D V+ T M+S Y HG EA+ F+
Sbjct: 444 DELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQ 503
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
+ G++PD VT +LSAC H+GL+DEG +F M YG++P ++HYSCM+D+LGR G L
Sbjct: 504 KFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRL 563
Query: 402 NDAKELIKNMP-FEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNI 460
+A E+I+ P N+ + L A ++ S+G A L+ P D Y++L N+
Sbjct: 564 LEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNL 623
Query: 461 YSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKL 517
Y++ W A +VR MK L + PGCS+IE +K+ F +D SH ++ +++ L
Sbjct: 624 YASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 171/364 (46%), Gaps = 10/364 (2%)
Query: 47 LVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
L+S L S+ SL +++H R++ RD + L++ Y A+ +F+
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 107 P-NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
D WNSL+SG+SK + + VF + + + TF +VI A
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQ 225
G+ +H VK G V V ++L+ MY KF +++ ++F M E+++ SWN++++ Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
+G +A+ F M +G P+ ++ + AC L + +H G + + +
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
+ L+++Y K L + +VF ++ + VA +M+ GY G ++ R I EG
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 346 EPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHY-SC-MVDLLGRCGLL 401
P T T +L ACS S + GK H + + S V D Y +C ++DL +CG
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA-----DIYVNCSLIDLYFKCGEA 360
Query: 402 NDAK 405
N A+
Sbjct: 361 NLAE 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 38 SISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATP 97
S+ P +++L A ++L + IH + +S D + L+ Y G
Sbjct: 403 SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEK 462
Query: 98 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 157
+A +F+ +P KD VSW ++S + G + F M+ L+ + +T ++V+SAC
Sbjct: 463 EAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQK-FGLKPDGVTLLAVLSAC 521
Query: 158 ALAKAREEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE 210
A +EG ++ K G+E ++ + +I++ G+ G + A+++ E
Sbjct: 522 GHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE 575
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 245/445 (55%), Gaps = 4/445 (0%)
Query: 50 TLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNK 109
TL++A S+L+ + H ++KS + L+ Y+ G +A+ +F+E +
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV 306
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
D V W +++ G++ G + +S+F MK ++++ N +T SV+S C L + E G+ V
Sbjct: 307 DLVMWTAMIVGYTHNGSVNEALSLFQKMKG-VEIKPNCVTIASVLSGCGLIENLELGRSV 365
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRP 229
H ++K+G+ V N L++MY K A +F +E+++V+WNS+++ +QNG
Sbjct: 366 HGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSI 424
Query: 230 NEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL--DENITIVT 287
+EA+ F M + P+ T+ SL AC +L + ++H G ++ + T
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGT 484
Query: 288 TLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
LL+ Y+K G ++ +F I + + + +AM+ GY G +++ FE +++ +P
Sbjct: 485 ALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKP 544
Query: 348 DHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL 407
+ TFT +LSAC H+G+V+EGK YF M Y P HY+CMVD+L R G L A ++
Sbjct: 545 NESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDI 604
Query: 408 IKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLW 467
I+ MP +P+ +GA L ++ +G+ + ++ L P D Y+++SN+Y++ G W
Sbjct: 605 IEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRW 664
Query: 468 SDAAKVRALMKTKVLARNPGCSFIE 492
+ A +VR LMK + L++ G S +E
Sbjct: 665 NQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 181/358 (50%), Gaps = 20/358 (5%)
Query: 79 DGFIGD-----QLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSV 133
+G +GD +LVS Y G T DA+L+FD++P DF W ++ + + + +
Sbjct: 70 NGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKL 129
Query: 134 FSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYG 193
+ ++ +++ F + AC + + G+ +HC VK+ V V+ L++MY
Sbjct: 130 YDLLMKH-GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYA 187
Query: 194 KFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVS 253
K G + SA K+F +T +N+V W SM+A +N E + F+ MR N + +E T +
Sbjct: 188 KCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGT 247
Query: 254 LLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPD 313
L+ AC L + HG + G++ + +VT+LL++Y K G ++ + +VF E S D
Sbjct: 248 LIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVD 307
Query: 314 KVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQ 373
V TAM+ GY +G EA+ F++ ++P+ VT +LS C GL++ +
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIEN----LE 360
Query: 374 VMSDVYGVQPRLDHY-----SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
+ V+G+ ++ + + +V + +C DAK + + M E + W +++
Sbjct: 361 LGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFE-MESEKDIVAWNSIISG 417
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 235/442 (53%), Gaps = 33/442 (7%)
Query: 99 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF-SVMKSDLDLELNELTFISVISAC 157
A LF+++ N + +NS++ ++ + + ++ +++ +L + TF + +C
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELP-DRFTFPFMFKSC 119
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWN 217
A + G+ VH K G V N LI+MY KF + A K+F M E++++SWN
Sbjct: 120 ASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWN 179
Query: 218 SMVAVCTQNGRPN-------------------------------EAINYFSMMRLNGLFP 246
S+++ + G+ EA+++F M+L G+ P
Sbjct: 180 SLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEP 239
Query: 247 DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF 306
DE +++S+L +C L L + +H G + + L+ +YSK G ++ + ++F
Sbjct: 240 DEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF 299
Query: 307 AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
++ D ++ + M+SGYA HG AI+ F R ++P+ +TF LLSACSH G+
Sbjct: 300 GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQ 359
Query: 367 EGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
EG YF +M Y ++P+++HY C++D+L R G L A E+ K MP +P+S +WG+LL +
Sbjct: 360 EGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 419
Query: 427 SRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNP 486
R N+ + A ++L+ L+P D NY++L+NIY+ G W D +++R +++ + + + P
Sbjct: 420 CRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTP 479
Query: 487 GCSFIEHGNKIHRFVVDDYSHP 508
G S IE N + FV D S P
Sbjct: 480 GGSLIEVNNIVQEFVSGDNSKP 501
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 128/257 (49%), Gaps = 7/257 (2%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
+V + RD + L+S Y +G A+ LF M +K VSW +++SG++ G
Sbjct: 165 KVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVE 224
Query: 130 CMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
M F M+ +E +E++ ISV+ +CA + E G+++H A + G Q V N LI
Sbjct: 225 AMDFFREMQL-AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALI 283
Query: 190 NMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
MY K G + A +LF M ++++SW++M++ +G + AI F+ M+ + P+
Sbjct: 284 EMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFT---CGLDENITIVTTLLNLYSKIGRLNASCKVF 306
T + LL AC H+ E + ++ I L+++ ++ G+L + ++
Sbjct: 344 TFLGLLSACS--HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEIT 401
Query: 307 AEIS-KPDKVACTAMLS 322
+ KPD ++LS
Sbjct: 402 KTMPMKPDSKIWGSLLS 418
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 152/352 (43%), Gaps = 37/352 (10%)
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV 220
K+R E + ++ + G+ +V +++ K +D A +LF ++ N+ +NS++
Sbjct: 21 KSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSII 80
Query: 221 AVCTQNGRPNEAIN-YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL 279
T N + I Y ++R + PD T + ++C +L L + VHG + G
Sbjct: 81 RAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGP 140
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYA-----------MH- 327
++ L+++Y K L + KVF E+ + D ++ ++LSGYA H
Sbjct: 141 RFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHL 200
Query: 328 -------------------GCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEG 368
GC EA+ FF G+EPD ++ +L +C+ G ++ G
Sbjct: 201 MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260
Query: 369 KHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASR 428
K + + ++ G + + ++++ +CG+++ A +L M E + + + +
Sbjct: 261 K-WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM--EGKDVISWSTMISGY 317
Query: 429 VYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSAS--GLWSDAAKVRALMK 478
YH + G N + P L + + S G+W + + +M+
Sbjct: 318 AYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMR 369
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 78 RDGFIG-----DQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMS 132
R GF+ + L+ Y G A LF +M KD +SW++++SG++ G+ +
Sbjct: 269 RRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIE 328
Query: 133 VFSVMKSDLDLELNELTFISVISACALAKAREEG-QYVHCCAVKLGMELQVKVVNTLINM 191
F+ M+ ++ N +TF+ ++SAC+ +EG +Y +E +++ LI++
Sbjct: 329 TFNEMQR-AKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 192 YGKFGFVDSAFKLFWAMT-EQNMVSWNSMVAVCTQNGRPNEAI 233
+ G ++ A ++ M + + W S+++ C G + A+
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 252/474 (53%), Gaps = 37/474 (7%)
Query: 95 ATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVI 154
A P Q ++ ++ VSW S ++ ++ G L FS M + +E N +TFI+++
Sbjct: 21 ANPKIQR-HNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDM-TLAGVEPNHITFIALL 78
Query: 155 SACALAKAREE--GQYVHCCAVKLGMELQVKVV--------------------------- 185
S C + E G +H A KLG++ +V
Sbjct: 79 SGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK 138
Query: 186 -----NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMR 240
NT+I+ Y + G VD+A K+F M E++++SW +M+ + G EA+ +F M+
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQ 198
Query: 241 LNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
++G+ PD +++ L AC L VH + + N+ + +L++LY + G +
Sbjct: 199 ISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVE 258
Query: 301 ASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
+ +VF + K V+ +++ G+A +G E++ +F + +G +PD VTFT L+ACS
Sbjct: 259 FARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 361 HSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVW 420
H GLV+EG YFQ+M Y + PR++HY C+VDL R G L DA +L+++MP +PN V
Sbjct: 319 HVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVI 378
Query: 421 GALLGA-SRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKT 479
G+LL A S +NI + + ++L L+ NY++LSN+Y+A G W A+K+R MK
Sbjct: 379 GSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKG 438
Query: 480 KVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSET 533
L + PG S IE + +H F+ D +H ++ I + LE + S ++ G V ET
Sbjct: 439 LGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 175/361 (48%), Gaps = 36/361 (9%)
Query: 47 LVSTLLVALKSSSSLYCCRVIHARVIKSLDY---RDGFIGDQLVSCYLNMGATPDAQLLF 103
+V T ++ + S R AR++ DY ++ + ++ Y+ G +A +F
Sbjct: 110 MVGTAIIGMYSKRG----RFKKARLV--FDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMF 163
Query: 104 DEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAR 163
D+MP +D +SW ++++GF K+G + F M+ ++ + + I+ ++AC A
Sbjct: 164 DKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS-GVKPDYVAIIAALNACTNLGAL 222
Query: 164 EEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVC 223
G +VH + + V+V N+LI++Y + G V+ A ++F+ M ++ +VSWNS++
Sbjct: 223 SFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGF 282
Query: 224 TQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAV-HGVIFTCG--LD 280
NG +E++ YF M+ G PD T L AC H+ + E + + I C +
Sbjct: 283 AANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS--HVGLVEEGLRYFQIMKCDYRIS 340
Query: 281 ENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQFFER 339
I L++LYS+ GRL + K+ + KP++V ++L+ + HG I ER
Sbjct: 341 PRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG---NNIVLAER 397
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
++ H+T L+ SHS V ++S++Y + + S M + G
Sbjct: 398 LMK------HLTD---LNVKSHSNYV--------ILSNMYAADGKWEGASKMRRKMKGLG 440
Query: 400 L 400
L
Sbjct: 441 L 441
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 250/492 (50%), Gaps = 40/492 (8%)
Query: 76 DYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFS 135
D R+ L+ Y+N A +F EMP + +WN ++SG + G L +C+S+F
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 136 VMKSDLDLELNELTFISVISACALAKARE-EGQYVHCCAVKLGMELQVKVVNTLINMYGK 194
M + + + TF S+++AC+ + G+ VH +K G V+ N++++ Y K
Sbjct: 194 EMLES-EFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTK 252
Query: 195 FGFVDSAFK-------------------------------LFWAMTEQNMVSWNSMVAVC 223
G D A + +F E+N+V+W +M+
Sbjct: 253 LGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGY 312
Query: 224 TQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENI 283
+NG +A+ +F M +G+ D ++L AC L L + +HG + CG
Sbjct: 313 GRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA 372
Query: 284 TIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE 343
+ L+NLY+K G + + + F +I+ D V+ ML + +HG +A++ ++ I
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 344 GMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLND 403
G++PD+VTF LL+ CSHSGLV+EG F+ M Y + +DH +CM+D+ GR G L +
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAE 492
Query: 404 AKELIKN----MPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSN 459
AK+L + N+ W LLGA + + +G+E ++ L +PS+ ++++LSN
Sbjct: 493 AKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSN 552
Query: 460 IYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKK--- 516
+Y ++G W + VR M + + + PGCS+IE GN++ FVV D SHP +++ +
Sbjct: 553 LYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNC 612
Query: 517 LEEVMSKIQEFG 528
L+ M + FG
Sbjct: 613 LQHEMRNPETFG 624
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 188/440 (42%), Gaps = 71/440 (16%)
Query: 94 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
G A+ +FD MP D V+WN++++ +S+ G +++F+ ++ D + ++ +F ++
Sbjct: 18 GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS-DAKPDDYSFTAI 76
Query: 154 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK------------------- 194
+S CA + G+ + ++ G + V N+LI+MYGK
Sbjct: 77 LSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSR 136
Query: 195 ---------FGFV-----DSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMR 240
F ++ ++A +F M ++ +WN M++ G+ ++ F M
Sbjct: 137 NEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEML 196
Query: 241 LNGLFPDEATMVSLLQACETLHLRRLV-EAVHGVIFTCGLDENITIVTTLLNLYSKIG-- 297
+ PD T SL+ AC + VH V+ G + ++L+ Y+K+G
Sbjct: 197 ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSR 256
Query: 298 ----RLNASCKVFAEIS-----------------------KPDK--VACTAMLSGYAMHG 328
R S +V ++S P+K V T M++GY +G
Sbjct: 257 DDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNG 316
Query: 329 CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY 388
G +A++FF ++ G++ DH + +L ACS L+ GK + G Q
Sbjct: 317 DGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHC-GFQGYAYVG 375
Query: 389 SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIA--L 446
+ +V+L +CG + +A ++ + W +L A V+ + +N+IA +
Sbjct: 376 NALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGI 434
Query: 447 DPSDPRNYIMLSNIYSASGL 466
P D +I L S SGL
Sbjct: 435 KP-DNVTFIGLLTTCSHSGL 453
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
R ++S++ + ++ + +G T A +F P K+ V+W ++++G+ + GD
Sbjct: 261 RELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQ 320
Query: 130 CMSVF-SVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTL 188
+ F +MKS +D + + +V+ AC+ G+ +H C + G + V N L
Sbjct: 321 ALRFFVEMMKSGVDSD--HFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNAL 378
Query: 189 INMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDE 248
+N+Y K G + A + F + +++VSWN+M+ +G ++A+ + M +G+ PD
Sbjct: 379 VNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDN 438
Query: 249 ATMVSLLQAC 258
T + LL C
Sbjct: 439 VTFIGLLTTC 448
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 95/216 (43%), Gaps = 34/216 (15%)
Query: 178 MELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFS 237
M + V++ + + ++ K G + SA ++F M E + V+WN+M+ ++ G EAI F+
Sbjct: 1 MSVLVRLTSKIASL-AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFT 59
Query: 238 MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
+R + PD+ + ++L C +L + + ++ G ++ + +L+++Y K
Sbjct: 60 QLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCS 119
Query: 298 ---------------------------------RLNASCKVFAEISKPDKVACTAMLSGY 324
+ A+ VF E+ K A M+SG+
Sbjct: 120 DTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGH 179
Query: 325 AMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
A G + F+ + +PD TF+ L++ACS
Sbjct: 180 AHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
++IH +I ++G+ LV+ Y G +A F ++ NKD VSWN+++ F
Sbjct: 357 KMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVH 416
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVK-LGMELQVK 183
G + ++ M + ++ + +TFI +++ C+ + EEG + VK + L+V
Sbjct: 417 GLADQALKLYDNMIAS-GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVD 475
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQNMV-------SWNSMVAVCT 224
V +I+M+G+ G + A L A T ++V SW +++ C+
Sbjct: 476 HVTCMIDMFGRGGHLAEAKDL--ATTYSSLVTDSSNNSSWETLLGACS 521
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 286 VTTLLNLYSKI------GRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFER 339
++ L+ L SKI GR+ ++ +VF + + D VA ML+ Y+ G EAI F +
Sbjct: 1 MSVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ 60
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
+PD +FT +LS C+ G V G+ Q + G L + ++D+ G+C
Sbjct: 61 LRFSDAKPDDYSFTAILSTCASLGNVKFGRK-IQSLVIRSGFCASLPVNNSLIDMYGKCS 119
Query: 400 LLNDAKELIKNMPFEP-NSGVWGALLGA 426
A ++ ++M + N W +LL A
Sbjct: 120 DTLSANKVFRDMCCDSRNEVTWCSLLFA 147
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/438 (31%), Positives = 232/438 (52%), Gaps = 33/438 (7%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
L+S Y N G +++ LFD N+ + WNS++SG+ + +F+ M+++
Sbjct: 259 LISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNET--RE 316
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGF-------- 197
+ T +VI+AC E G+ +HC A K G+ + V +TL++MY K G
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 198 -----------------------VDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAIN 234
+D A ++F + ++++SWNSM +QNG E +
Sbjct: 377 SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLE 436
Query: 235 YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
YF M L DE ++ S++ AC ++ L E V GLD + + ++L++LY
Sbjct: 437 YFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYC 496
Query: 295 KIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTH 354
K G + +VF + K D+V +M+SGYA +G G EAI F++ G+ P +TF
Sbjct: 497 KCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMV 556
Query: 355 LLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFE 414
+L+AC++ GLV+EG+ F+ M +G P +H+SCMVDLL R G + +A L++ MPF+
Sbjct: 557 VLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFD 616
Query: 415 PNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVR 474
+ +W ++L ++GK+AAE +I L+P + Y+ LS I++ SG W +A VR
Sbjct: 617 VDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVR 676
Query: 475 ALMKTKVLARNPGCSFIE 492
LM+ + +NPG S+ +
Sbjct: 677 KLMRENNVTKNPGSSWTD 694
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 155/308 (50%), Gaps = 28/308 (9%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
++ ++ D + + ++ Y + G DA+ +F+ + NK +SWNS+ +GFS+ G
Sbjct: 374 KLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVE 433
Query: 130 CMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
+ F M LDL +E++ SVISACA + E G+ V A +G++ V ++LI
Sbjct: 434 TLEYFHQMHK-LDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLI 492
Query: 190 NMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
++Y K GFV+ ++F M + + V WNSM++ NG+ EAI+ F M + G+ P +
Sbjct: 493 DLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQI 552
Query: 250 TMVSLLQACETLHL----RRLVEAV---HGVI-----FTCGLDENITIVTTLLNLYSKIG 297
T + +L AC L R+L E++ HG + F+C +++L ++ G
Sbjct: 553 TFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSC-----------MVDLLARAG 601
Query: 298 RLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDH-VTFTHL 355
+ + + E+ D +++L G +G + E+ I +EP++ V + L
Sbjct: 602 YVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIE--LEPENSVAYVQL 659
Query: 356 LSACSHSG 363
+ + SG
Sbjct: 660 SAIFATSG 667
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/508 (21%), Positives = 201/508 (39%), Gaps = 139/508 (27%)
Query: 40 STYPRDPLVSTLLVALKSSSSLYCCRVIHA----------RVIKSLDYRDGF------IG 83
S+Y R L S+ L A++ Y R++ + R L + GF +
Sbjct: 7 SSY-RFYLSSSFLQAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVA 65
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSL-------------------------- 117
+ L+ Y G A+ LFDEMP++++ SWN++
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGY 125
Query: 118 -----VSGFSKRGDLGNCMSVFSVMKSDLDLELNEL------------------------ 148
VSGF+K G+L +F+ M + LN L
Sbjct: 126 SWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA 185
Query: 149 ---TFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK----------- 194
T +V+ ACA +A + G+ +H + G+E K+ ++L+N+Y K
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 195 --------------------FGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAIN 234
G V+ + LF + + ++ WNSM++ N EA+
Sbjct: 246 EQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALV 305
Query: 235 YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
F+ MR N D T+ +++ AC L + +H GL ++I + +TLL++YS
Sbjct: 306 LFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 295 KIGRLNASCKVFAEISKPDKVACTAML-------------------------------SG 323
K G +CK+F+E+ D + +M+ +G
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNG 424
Query: 324 YAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQP 383
++ +GC E +++F + + + D V+ + ++SAC+ ++ G+ F + + G+
Sbjct: 425 FSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDS 483
Query: 384 RLDHYSCMVDLLGRCGLLNDAKELIKNM 411
S ++DL +CG + + + M
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTM 511
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 216/413 (52%), Gaps = 2/413 (0%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+H V+K D + LV Y G A+ L+ V S+VS ++++GD
Sbjct: 268 LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGD 327
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ + FS + L ++++ + + ++ C + + G +H A+K G+ + VVN
Sbjct: 328 MDIAVVYFSKTR-QLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN 386
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYF-SMMRLNGLF 245
LI MY KF V++ LF + E ++SWNS+++ C Q+GR + A F MM GL
Sbjct: 387 GLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLL 446
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
PD T+ SLL C L L + +HG + + T L+++Y+K G + V
Sbjct: 447 PDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESV 506
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
F I P +M+SGY++ G A+ + +G++PD +TF +LSAC+H G V
Sbjct: 507 FKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFV 566
Query: 366 DEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLG 425
DEGK F+ M +G+ P L HY+ MV LLGR L +A LI M +P+S VWGALL
Sbjct: 567 DEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLS 626
Query: 426 ASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMK 478
A ++ + +G+ A + LD + Y+++SN+Y+ +W D +VR +MK
Sbjct: 627 ACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMK 679
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 169/331 (51%), Gaps = 9/331 (2%)
Query: 40 STYPRDPLVSTLLVALKSSSSLYCCRV--IHARVIKSLDYRDGFIGDQLVSCYLNMGATP 97
S P +S L A +S + + +V + + KS R ++ L++ YL G
Sbjct: 43 SLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVT 102
Query: 98 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 157
AQ+LFDEMP +D V WN+L+ G+S+ G + +F VM + T ++++ C
Sbjct: 103 SAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ-GFSPSATTLVNLLPFC 161
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWN 217
+G+ VH A K G+EL +V N LI+ Y K + SA LF M +++ VSWN
Sbjct: 162 GQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWN 221
Query: 218 SMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC 277
+M+ +Q+G EAI F M + T+++LL A H+ E +H ++ C
Sbjct: 222 TMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA----HVSH--EPLHCLVVKC 275
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFF 337
G+ +I++VT+L+ YS+ G L ++ +++A + V T+++S YA G A+ +F
Sbjct: 276 GMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYF 335
Query: 338 ERTIREGMEPDHVTFTHLLSACSHSGLVDEG 368
+T + M+ D V +L C S +D G
Sbjct: 336 SKTRQLCMKIDAVALVGILHGCKKSSHIDIG 366
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 4/218 (1%)
Query: 211 QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL--HLRRLVE 268
+++ ++S++ C + I F + + L P+ TM LQA T + VE
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 269 AVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHG 328
V + GLD + + T+LLNLY K G + ++ +F E+ + D V A++ GY+ +G
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 329 CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY 388
+A + F +++G P T +LL C G V +G+ V + G++
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS-GLELDSQVK 189
Query: 389 SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
+ ++ +C L A+ L + M + ++ W ++GA
Sbjct: 190 NALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGA 226
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
Query: 52 LVALKSSSSLYCC----RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP 107
+ +L + S CC + +H +++ + F+ L+ Y G A+ +F +
Sbjct: 452 IASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK 511
Query: 108 NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQ 167
+WNS++SG+S G +S + M+ L+ +E+TF+ V+SAC +EG+
Sbjct: 512 APCTATWNSMISGYSLSGLQHRALSCYLEMREK-GLKPDEITFLGVLSACNHGGFVDEGK 570
Query: 168 YVHCCAVK-LGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM-TEQNMVSWNSMVAVC 223
+K G+ ++ ++ + G+ A L W M + + W ++++ C
Sbjct: 571 ICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSAC 628
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 212/348 (60%), Gaps = 4/348 (1%)
Query: 179 ELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFS- 237
E V +++ Y + G + +A LF M E+++ SWN+++A CTQNG EA++ F
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRR 249
Query: 238 MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
M+ + P+E T+V +L AC +L + +H + L ++ + +L++LY K G
Sbjct: 250 MINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCG 309
Query: 298 RLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR---EGMEPDHVTFTH 354
L + VF SK A +M++ +A+HG EAI FE ++ ++PDH+TF
Sbjct: 310 NLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIG 369
Query: 355 LLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFE 414
LL+AC+H GLV +G+ YF +M++ +G++PR++HY C++DLLGR G ++A E++ M +
Sbjct: 370 LLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMK 429
Query: 415 PNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVR 474
+ +WG+LL A +++ ++ + + A +NL+AL+P++ M++N+Y G W +A + R
Sbjct: 430 ADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRAR 489
Query: 475 ALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMS 522
++K + + PG S IE N++H+F D SHP++++I+ L+ ++S
Sbjct: 490 KMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 130/248 (52%), Gaps = 5/248 (2%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
++S Y G +A LF++MP +D SWN++++ ++ G +S+F M ++ +
Sbjct: 199 MLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRP 258
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF 205
NE+T + V+SACA + + +H A + + V V N+L+++YGK G ++ A +F
Sbjct: 259 NEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF 318
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPNEAINYF-SMMRL--NGLFPDEATMVSLLQACETLH 262
+++++ +WNSM+ +GR EAI F MM+L N + PD T + LL AC
Sbjct: 319 KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGG 378
Query: 263 LRRLVEAVHGVIFT-CGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAM 320
L ++ G++ I L++L + GR + + +V + + K D+ ++
Sbjct: 379 LVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSL 438
Query: 321 LSGYAMHG 328
L+ +HG
Sbjct: 439 LNACKIHG 446
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 51/254 (20%)
Query: 270 VHGVIFTCGLDENITIVTTLLNLY-SKIGRLNASCKVFAEISKPDKVACTAMLSGYA--- 325
VH +F G + + T LL+ Y S + + + ++F E+S+ + V+ TAMLSGYA
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 326 ----------------------------MHGCGTEAIQFFERTIRE-GMEPDHVTFTHLL 356
+G EA+ F R I E + P+ VT +L
Sbjct: 208 DISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVL 267
Query: 357 SACSHSGLVD--EGKHYF----QVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKN 410
SAC+ +G + +G H F + SDV+ + +VDL G+CG L +A + K
Sbjct: 268 SACAQTGTLQLAKGIHAFAYRRDLSSDVFVS-------NSLVDLYGKCGNLEEASSVFK- 319
Query: 411 MPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPR----NYIMLSNIYSASGL 466
M + + W +++ ++ E ++ L+ +D + +I L N + GL
Sbjct: 320 MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGL 379
Query: 467 WSDAAKVRALMKTK 480
S LM +
Sbjct: 380 VSKGRGYFDLMTNR 393
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 233/456 (51%), Gaps = 41/456 (8%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
I L+ Y G +A+ +FDEMP +D ++W ++VS + + D+ + S+ + M
Sbjct: 906 IQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMS--- 962
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
E NE T N LIN Y G ++ A
Sbjct: 963 --EKNEAT-----------------------------------SNCLINGYMGLGNLEQA 985
Query: 202 FKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL 261
LF M ++++SW +M+ +QN R EAI F M G+ PDE TM +++ AC L
Sbjct: 986 ESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHL 1045
Query: 262 HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAML 321
+ + + VH G ++ I + L+++YSK G L + VF + K + +++
Sbjct: 1046 GVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSII 1105
Query: 322 SGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGV 381
G A HG EA++ F + E ++P+ VTF + +AC+H+GLVDEG+ ++ M D Y +
Sbjct: 1106 EGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSI 1165
Query: 382 QPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAE 441
++HY MV L + GL+ +A ELI NM FEPN+ +WGALL R++ N+ I + A
Sbjct: 1166 VSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFN 1225
Query: 442 NLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARN-PGCSFIEHGNKIHRF 500
L+ L+P + Y +L ++Y+ W D A++R M+ + + PG S I + H F
Sbjct: 1226 KLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLF 1285
Query: 501 VVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESI 536
D SH SD++ L+E+ ++ G+V ETE++
Sbjct: 1286 AAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + +ST++ A L + +H +++ D +IG LV Y G+ A L+
Sbjct: 1030 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 1089
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F +P K+ WNS++ G + G + +F+ M+ + ++ N +TF+SV +AC A
Sbjct: 1090 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEME-SVKPNAVTFVSVFTACTHAGL 1148
Query: 163 REEGQYVHCCAV-KLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSMV 220
+EG+ ++ + + V+ +++++ K G + A +L M E N V W +++
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 221 AVC 223
C
Sbjct: 1209 DGC 1211
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 5/172 (2%)
Query: 153 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQN 212
+I C+ K E +K + +++N I F +D A M E N
Sbjct: 779 IIKQCSTPKLLESAL---AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPN 835
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
+ +N++ P ++ + M + + P T SL++A R E++
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQA 893
Query: 273 VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGY 324
I+ G ++ I TTL++ YS GR+ + KVF E+ + D +A T M+S Y
Sbjct: 894 HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAY 945
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 245/470 (52%), Gaps = 6/470 (1%)
Query: 45 DPLVSTLLVALKSSSSL---YCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL 101
DP T + L S L ++IHAR+I S D + + L+ Y + G +A
Sbjct: 297 DPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFY 356
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
+F + N + VSWNS++SG S+ G M ++ + +E TF + ISA A +
Sbjct: 357 VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPE 416
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVA 221
G+ +H KLG E V V TL++MY K +SA K+F M E+++V W M+
Sbjct: 417 RFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIV 476
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
++ G A+ +F M D ++ S++ AC + + R E H + G D
Sbjct: 477 GHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDC 536
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
+++ L+++Y K G+ + +F+ S PD +ML Y+ HG +A+ FFE+ +
Sbjct: 537 VMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL 596
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
G PD VT+ LL+ACSH G +GK + M + G++ HYSCMV+L+ + GL+
Sbjct: 597 ENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLV 655
Query: 402 NDAKELIKNMPFEPNSG-VWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNI 460
++A ELI+ P N +W LL A N+ IG AAE ++ LDP D +I+LSN+
Sbjct: 656 DEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNL 715
Query: 461 YSASGLWSDAAKVRALMKTKVLARNPGCSFIE-HGNKIHRFVVDDYSHPD 509
Y+ +G W D A++R ++ +++PG S+IE + N F D S+P+
Sbjct: 716 YAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 167/341 (48%), Gaps = 7/341 (2%)
Query: 36 FHSISTYPRDPLVSTLLVALK---SSSSLYCCRVIHARVIKS---LDYRDGFIGDQLVSC 89
F I P + + S+++ + S + L R IHA V+ + + + L+S
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 90 YLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELT 149
Y+ G+ A+ +FD+MP+++ VS+N+L S +S+ D + + + ++ N T
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
F S++ CA+ + G ++ +KLG V V +++ MY G ++SA ++F +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 210 EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA 269
++ V+WN+M+ +N + + + +F M ++G+ P + T +L C L L +
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKL 321
Query: 270 VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC 329
+H I ++ + LL++Y G + + VF I P+ V+ +++SG + +G
Sbjct: 322 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGF 381
Query: 330 GTEAIQFFERTIREGM-EPDHVTFTHLLSACSHSGLVDEGK 369
G +A+ + R +R PD TF+ +SA + GK
Sbjct: 382 GEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK 422
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 174/364 (47%), Gaps = 29/364 (7%)
Query: 81 FIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGF----------SKRGDLGNC 130
+ + L+S Y+ + A+ +FD+MP ++ V+ L + F S+ LG+
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 131 MSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVK---VVNT 187
+F + +++ + ELT +S L +AR+ +H + G + N
Sbjct: 83 QMIFFMPLNEIASSVVELT-RKCVSITVLKRARQ----IHALVLTAGAGAATESPYANNN 137
Query: 188 LINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSM---MRLNGL 244
LI+MY + G ++ A K+F M +N+VS+N++ + ++N P+ A F + M +
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRN--PDFASYAFPLTTHMAFEYV 195
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
P+ +T SL+Q C L + +++ I G +N+ + T++L +YS G L ++ +
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
+F ++ D VA M+ G + + + FF + G++P T++ +L+ CS G
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 365 VDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGA 422
GK H ++SD P LD+ ++D+ CG + +A + + PN W +
Sbjct: 316 YSLGKLIHARIIVSDSLADLP-LDN--ALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNS 371
Query: 423 LLGA 426
++
Sbjct: 372 IISG 375
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 215/380 (56%)
Query: 143 LELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAF 202
L++ T+ ++ C K +G+ +H +G L + L+ +Y G + +A
Sbjct: 104 LQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAG 163
Query: 203 KLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLH 262
LF ++ ++++ WN+M++ Q G E + + MR N + PD+ T S+ +AC L
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 223
Query: 263 LRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLS 322
+ H V+ + NI + + L+++Y K + +VF ++S + + T+++S
Sbjct: 224 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 283
Query: 323 GYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQ 382
GY HG +E ++ FE+ EG P+ VTF +L+AC+H GLVD+G +F M YG++
Sbjct: 284 GYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIE 343
Query: 383 PRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAEN 442
P HY+ MVD LGR G L +A E + P + + VWG+LLGA R++ N+ + + AA
Sbjct: 344 PEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATK 403
Query: 443 LIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVV 502
+ LDP++ NY++ +N Y++ GL A+KVR M+ + ++PG S IE ++HRF+
Sbjct: 404 FLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMK 463
Query: 503 DDYSHPDSDKIHKKLEEVMS 522
DD SH S+KI+KK+ E+ S
Sbjct: 464 DDTSHRLSEKIYKKVHEMTS 483
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 49 STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPN 108
+ LL K + IHA++ + ++ +L+ Y G A +LF +
Sbjct: 112 AVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKI 171
Query: 109 KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQY 168
+D + WN+++SG+ ++G + ++ M+ + + ++ TF SV AC+ E G+
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN-RIVPDQYTFASVFRACSALDRLEHGKR 230
Query: 169 VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGR 228
H +K ++ + V + L++MY K ++F ++ +N+++W S+++ +G+
Sbjct: 231 AHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK 290
Query: 229 PNEAINYFSMMRLNGLFPDEATMVSLLQAC 258
+E + F M+ G P+ T + +L AC
Sbjct: 291 VSEVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 68 HARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDL 127
HA +IK + + LV Y + D +FD++ ++ ++W SL+SG+ G +
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 291
Query: 128 GNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG-QYVHCCAVKLGMELQVKVVN 186
+ F MK + N +TF+ V++AC ++G ++ + G+E + +
Sbjct: 292 SEVLKCFEKMKEE-GCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYA 350
Query: 187 TLINMYGKFGFVDSAFKLFW-AMTEQNMVSWNSMVAVCTQNG 227
+++ G+ G + A++ + +++ W S++ C +G
Sbjct: 351 AMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 228/452 (50%), Gaps = 46/452 (10%)
Query: 42 YPRDPLVSTLLVALKSSSSLYCCRVIHAR-VIKSLDYRDGFIGDQLVSCYLNMGATPDAQ 100
+ +D +V T V C + AR V + R+ LV Y+ G +A+
Sbjct: 141 FDKDVVVGTSFVDFYGK----CKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAK 196
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
+FD MP ++ SWN+LV G K GDL N +F +E+ +IS
Sbjct: 197 SMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLF-----------DEMPKRDIIS----- 240
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV 220
++I+ Y K G + SA LF ++ +W++++
Sbjct: 241 ------------------------YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALI 276
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT-CGL 279
QNG+PNEA FS M + PDE MV L+ AC + L E V +
Sbjct: 277 LGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNK 336
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFER 339
+ +V L+++ +K G ++ + K+F E+ + D V+ +M+ G A+HGCG+EAI+ FE+
Sbjct: 337 FSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEK 396
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
+ EG+ PD V FT +L C S LV+EG YF++M Y + DHYSC+V+LL R G
Sbjct: 397 MVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTG 456
Query: 400 LLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSN 459
L +A ELIK+MPFE ++ WG+LLG ++ N I + A +L L+P +Y++LSN
Sbjct: 457 KLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSN 516
Query: 460 IYSASGLWSDAAKVRALMKTKVLARNPGCSFI 491
IY+A W+D A +R M + + G S+I
Sbjct: 517 IYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 164/352 (46%), Gaps = 19/352 (5%)
Query: 67 IHARVI-KSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRG 125
IHAR+I K L+ I + S + + + +F+ +P+ WN L+ G+S +
Sbjct: 29 IHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNKF 88
Query: 126 DLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVV 185
+S+ M +E TF V+ C+ G VH +++G + V V
Sbjct: 89 LFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVG 148
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
+ ++ YGK + SA K+F M E+N VSW ++V ++G EA + F +M L
Sbjct: 149 TSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLG 208
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
A + L+++ + ++ ++L + + +I T++++ Y+K G + ++ +
Sbjct: 209 SWNALVDGLVKSGDLVNAKKLFDEMP--------KRDIISYTSMIDGYAKGGDMVSARDL 260
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG-- 363
F E D A +A++ GYA +G EA + F + ++PD L+SACS G
Sbjct: 261 FEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCF 320
Query: 364 -LVDEGKHYFQVMSDVYGVQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMP 412
L ++ Y + + HY ++D+ +CG ++ A +L + MP
Sbjct: 321 ELCEKVDSYLHQRMNKFS-----SHYVVPALIDMNAKCGHMDRAAKLFEEMP 367
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 242/446 (54%), Gaps = 12/446 (2%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL 143
+ +V + G +A LF+ MP +D VSW ++V G +K G + +F M
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP----- 229
Query: 144 ELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFK 203
E N +++ ++I+ A +E + ++ E NT+I + + ++ A
Sbjct: 230 ERNIISWNAMITGYAQNNRIDEADQL----FQVMPERDFASWNTMITGFIRNREMNKACG 285
Query: 204 LFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFS-MMRLNGLFPDEATMVSLLQACETLH 262
LF M E+N++SW +M+ +N EA+N FS M+R + P+ T VS+L AC L
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 263 LRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAE--ISKPDKVACTAM 320
+ +H +I +N + + LLN+YSK G L A+ K+F + + D ++ +M
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSM 405
Query: 321 LSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYG 380
++ YA HG G EAI+ + + + G +P VT+ +LL ACSH+GLV++G +F+ +
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Query: 381 VQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAA 440
+ R +HY+C+VDL GR G L D I + +GA+L A V++ +SI KE
Sbjct: 466 LPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVV 525
Query: 441 ENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRF 500
+ ++ D Y+++SNIY+A+G +AA++R MK K L + PGCS+++ G + H F
Sbjct: 526 KKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLF 585
Query: 501 VVDDYSHPDSDKIHKKLEEVMSKIQE 526
VV D SHP + + L ++ +K+++
Sbjct: 586 VVGDKSHPQFEALDSILSDLRNKMRK 611
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 182/393 (46%), Gaps = 61/393 (15%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
L+ +G +A+ LFD +P +D V+W +++G+ K GD+ +F +D
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD----RVDSRK 107
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVV---NTLINMYGKFGFVDSAF 202
N +T+ +++S +K A L E+ + V NT+I+ Y + G +D A
Sbjct: 108 NVVTWTAMVSGYLRSKQ-------LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKAL 160
Query: 203 KLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLH 262
+LF M E+N+VSWNSMV Q GR +EA+N F M + A + L + +
Sbjct: 161 ELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDE 220
Query: 263 LRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR------------------------ 298
RRL F C + NI ++ Y++ R
Sbjct: 221 ARRL--------FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMIT 272
Query: 299 -------LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG-MEPDHV 350
+N +C +F + + + ++ T M++GY + EA+ F + +R+G ++P+
Sbjct: 273 GFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVG 332
Query: 351 TFTHLLSACSH-SGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIK 409
T+ +LSACS +GLV EG+ Q++S + + S ++++ + G L A+++
Sbjct: 333 TYVSILSACSDLAGLV-EGQQIHQLISKSVHQKNEI-VTSALLNMYSKSGELIAARKMFD 390
Query: 410 N-MPFEPNSGVWGALLGASRVYHNISIGKEAAE 441
N + + + W +++ VY + GKEA E
Sbjct: 391 NGLVCQRDLISWNSMIA---VYAHHGHGKEAIE 420
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 229/405 (56%), Gaps = 12/405 (2%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDF--VSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
I +LV Y + G A +FD M +D +WNSL+SG+++ G + M+++ M
Sbjct: 129 ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE 188
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
D ++ + TF V+ AC + + G+ +H VK G V V+N L+ MY K G +
Sbjct: 189 D-GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIV 247
Query: 200 SAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACE 259
A +F + ++ VSWNSM+ +G +EA++ F +M NG+ PD+ + S+L
Sbjct: 248 KARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVL 307
Query: 260 TL-HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACT 318
+ H R+L HG + G++ +++ L+ LYSK G+L +C +F ++ + D V+
Sbjct: 308 SFKHGRQL----HGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWN 363
Query: 319 AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV 378
A++S H + +++FE+ R +PD +TF +LS C+++G+V++G+ F +MS
Sbjct: 364 AIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE 420
Query: 379 YGVQPRLDHYSCMVDLLGRCGLLNDAKELI-KNMPFEPNSGVWGALLGASRVYHNISIGK 437
YG+ P+++HY+CMV+L GR G++ +A +I + M E VWGALL A ++ N IG+
Sbjct: 421 YGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGE 480
Query: 438 EAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVL 482
AA+ L L+P + N+ +L IYS + D +VR +M + L
Sbjct: 481 VAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 162/345 (46%), Gaps = 27/345 (7%)
Query: 41 TYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQ 100
T+PR +L A S+ IH ++K D ++ + LV Y G A+
Sbjct: 197 TFPR------VLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
+FD +P+KD+VSWNS+++G+ G L + +F +M + +E +++ SV++
Sbjct: 251 NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQN-GIEPDKVAISSVLARVLSF 309
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV 220
K G+ +H ++ GME ++ V N LI +Y K G + A +F M E++ VSWN+++
Sbjct: 310 K---HGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII 366
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT-CGL 279
+ ++N + + YF M PD T VS+L C + E + ++ G+
Sbjct: 367 SAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGI 423
Query: 280 DENITIVTTLLNLYSKIGRL-NASCKVFAEIS-KPDKVACTAMLSGYAMHG---CGTEAI 334
D + ++NLY + G + A + E+ + A+L +HG G A
Sbjct: 424 DPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAA 483
Query: 335 Q-FFERTIREGMEPDHV-TFTHLLSACSHSGLVDEGKHYFQVMSD 377
Q FE +EPD+ F L+ S + ++ + Q+M D
Sbjct: 484 QRLFE------LEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVD 522
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 25/173 (14%)
Query: 253 SLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKP 312
SLL+ C +L VH +I L N+ I + L+ LY+ G + +VF +SK
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 313 DK--VACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS---------- 360
D A +++SGYA G +A+ + + +G++PD TF +L AC
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 361 -HSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP 412
H LV EG Y DVY + + +V + +CG + A+ + +P
Sbjct: 217 IHRDLVKEGFGY-----DVYVL-------NALVVMYAKCGDIVKARNVFDMIP 257
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 241/468 (51%), Gaps = 36/468 (7%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
IH + K+ + D F+ + L+ YL G ++ +FD MP +D VS+NS++ G+ K G
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACA------------LAKAREEG-------- 166
+ + +F +M ++ N +++ S+IS A A E+
Sbjct: 203 IVSARELFDLMPMEMK---NLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMI 259
Query: 167 -QYVHCCAVKLGMEL-------QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNS 218
YV ++ L V T+I+ Y K GFV A LF M +++V++NS
Sbjct: 260 DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNS 319
Query: 219 MVAVCTQNGRPNEAINYFS-MMRLNGLFPDEATMVSLLQACETLHLRRLVEAV--HGVIF 275
M+A QN EA+ FS M + + L PD+ T+V +L A L RL +A+ H I
Sbjct: 320 MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIA--QLGRLSKAIDMHLYIV 377
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
+ L+++YSK G + + VF I AM+ G A+HG G A
Sbjct: 378 EKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFD 437
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
+ R ++PD +TF +L+ACSHSGLV EG F++M + ++PRL HY CMVD+L
Sbjct: 438 MLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDIL 497
Query: 396 GRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYI 455
R G + AK LI+ MP EPN +W L A + G+ A++LI +P +Y+
Sbjct: 498 SRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYV 557
Query: 456 MLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVD 503
+LSN+Y++ G+W D +VR +MK + + + PGCS+IE ++H F VD
Sbjct: 558 LLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFVD 605
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 39/229 (17%)
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
WN+++ + P +A+ +M NG+ D+ ++ +L+AC L + +HG +
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
GL ++ + L+ LY K G L S ++F + K D V+ +M+ GY G A +
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 336 FFE------------------------------RTIREGMEPDHVTFTHLLSACSHSGLV 365
F+ + + E D +++ ++ G +
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 268
Query: 366 DEGKHYFQVMSDVYGVQPRLD--HYSCMVDLLGRCGLLNDAKELIKNMP 412
++ K F VM PR D ++ M+D + G ++ AK L MP
Sbjct: 269 EDAKGLFDVM-------PRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 172/404 (42%), Gaps = 49/404 (12%)
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCA 173
WN+++ S D + + +M + + +++ + V+ AC+ + G +H
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLEN-GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 174 VKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAI 233
K G+ + + N LI +Y K G + + ++F M +++ VS+NSM+ + G A
Sbjct: 148 KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAR 207
Query: 234 NYFSMMRL-------------------------NGLFPD--EATMVSLLQACETLHLRRL 266
F +M + + LF D E ++S +
Sbjct: 208 ELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGR 267
Query: 267 VEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAM 326
+E G +F ++ T+++ Y+K+G ++ + +F ++ D VA +M++GY
Sbjct: 268 IEDAKG-LFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 326
Query: 327 HGCGTEAIQFFERTIREG-MEPDHVTFTHLLSACSHSGLVDEG--KHYFQVMSDVYGVQP 383
+ EA++ F +E + PD T +L A + G + + H + V Y +
Sbjct: 327 NKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFY-LGG 385
Query: 384 RLDHYSCMVDLLGRCGLLNDAK---ELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAA 440
+L ++D+ +CG + A E I+N + W A++G ++ +G+ A
Sbjct: 386 KLG--VALIDMYSKCGSIQHAMLVFEGIENKSIDH----WNAMIGGLAIH---GLGESAF 436
Query: 441 ENLIALD----PSDPRNYIMLSNIYSASGLWSDAAKVRALMKTK 480
+ L+ ++ D ++ + N S SGL + LM+ K
Sbjct: 437 DMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRK 480
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P D + +L A+ L +H +++ Y G +G L+ Y G+ A L+
Sbjct: 348 PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLV 407
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F+ + NK WN+++ G + G LG + L L+ +++TF+ V++AC+ +
Sbjct: 408 FEGIENKSIDHWNAMIGGLAIHG-LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGL 466
Query: 163 REEGQY-VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM-TEQNMVSWNSMV 220
+EG K +E +++ ++++ + G ++ A L M E N V W + +
Sbjct: 467 VKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFL 526
Query: 221 AVCTQN 226
C+ +
Sbjct: 527 TACSHH 532
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 246/468 (52%), Gaps = 41/468 (8%)
Query: 98 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 157
+A +FDE+P D +S +++ F K F + L + NE TF +VI +
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLC-LGIRPNEFTFGTVIGSS 103
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKF---------------------- 195
++ + G+ +HC A+K+G+ V V + ++N Y K
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSIT 163
Query: 196 ----GFV-----DSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYF-SMMRLNGLF 245
G++ + A LF AM E+++V+WN+++ +Q GR EA+N F M+R +
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 223
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHG-VIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
P+E+T + A + +++H I G N+ + +L++ YSK G + S
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLL 283
Query: 305 VFAEISKPDK--VACTAMLSGYAMHGCGTEAIQFFERTIRE-GMEPDHVTFTHLLSACSH 361
F ++ + + V+ +M+ GYA +G G EA+ FE+ +++ + P++VT +L AC+H
Sbjct: 284 AFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNH 343
Query: 362 SGLVDEGKHYFQVMSDVYGVQP---RLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSG 418
+GL+ EG YF + Y P L+HY+CMVD+L R G +A+ELIK+MP +P G
Sbjct: 344 AGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 419 VWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMK 478
W ALLG +++ N + K AA ++ LDP D +Y+MLSN YSA W + + +R MK
Sbjct: 403 FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 479 TKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQE 526
L R GCS+IE ++I FV D ++ D++++ L V ++E
Sbjct: 463 ETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEE 510
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 4/178 (2%)
Query: 85 QLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLE 144
L+S YL +A LF MP + V+WN+++ GFS+ G ++ F M + +
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 223
Query: 145 LNELTFISVISACALAKAREEGQYVHCCAVK-LGMELQVKVVNTLINMYGKFGFVDSAFK 203
NE TF I+A + + G+ +H CA+K LG V V N+LI+ Y K G ++ +
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLL 283
Query: 204 LFWAMTEQ--NMVSWNSMVAVCTQNGRPNEAINYFS-MMRLNGLFPDEATMVSLLQAC 258
F + E+ N+VSWNSM+ NGR EA+ F M++ L P+ T++ +L AC
Sbjct: 284 AFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 8/232 (3%)
Query: 197 FVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
+ +A K+F + E +++S +++ + R EA F + G+ P+E T +++
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 257 ACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVA 316
+ T +L + +H GL N+ + + +LN Y K+ L + + F + P+ V+
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 317 CTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS 376
T ++SGY EA+ F R E VT+ ++ S +G +E + F M
Sbjct: 162 ITNLISGYLKKHEFEEALSLF----RAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDML 217
Query: 377 DVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL----IKNMPFEPNSGVWGALL 424
V P + C + + K + IK + N VW +L+
Sbjct: 218 REGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLI 269
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 217/425 (51%), Gaps = 6/425 (1%)
Query: 71 VIKSLDYRDGFIGDQLVSCYLN-MGATPDAQLLFDEMP-NKDFVSWNSLVSGFSKRGDLG 128
++ S D D I + V C+L +G A L + M +D SWNS++SG + G
Sbjct: 503 ILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHL 562
Query: 129 NCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTL 188
+ F M + + + +T + ISA +G+ H A+K EL ++ NTL
Sbjct: 563 ESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTL 622
Query: 189 INMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDE 248
I MYG+ ++SA K+F +++ N+ SWN +++ +QN E F ++L P+E
Sbjct: 623 ITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNE 679
Query: 249 ATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAE 308
T V LL A L H + G N + L+++YS G L KVF
Sbjct: 680 ITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRN 739
Query: 309 ISKPDKVACTAMLSGYAMHGCGTEAIQFF-ERTIREGMEPDHVTFTHLLSACSHSGLVDE 367
A +++S + HG G +A++ F E + MEP+ +F LLSACSHSG +DE
Sbjct: 740 SGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDE 799
Query: 368 GKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGAS 427
G Y++ M + +GV+P +H +VD+LGR G L +A E I + +GVWGALL A
Sbjct: 800 GLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSAC 859
Query: 428 RVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPG 487
+ + +GKE AE L ++P + YI L+N Y G W +A ++R +++ L + PG
Sbjct: 860 NYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPG 919
Query: 488 CSFIE 492
S I+
Sbjct: 920 YSVID 924
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 175/351 (49%), Gaps = 10/351 (2%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R +H +K +D +L++ Y G + LFDE+ KD + WNS+++ ++
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G + +F M + E + T + SA + + +HC A++ G+ +
Sbjct: 167 GRYIAAVGLFIEMIHKGN-EFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
N L+N+Y K + SA +F M +++VSWN+++ C NG P +++ YF M +G
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL--DENITIVTTLLNLYSKIGRLNAS 302
D T ++ AC ++ L E++HG++ G + ++++ +++++YSK G A+
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 303 CKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR-EGMEPDHVTFTHLLSACSH 361
VF E+ D ++ A+L+G+A +G EA + + ++PD T + S C
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405
Query: 362 SGLVDEGK--HYFQVMSDVYGVQPR-LDHYSCMVDLLGRCGLLNDAKELIK 409
EG+ H + V + +Q R L+ + ++D+ G+CGL A+ L K
Sbjct: 406 LSFSREGRAVHGYTVRME---MQSRALEVINSVIDMYGKCGLTTQAELLFK 453
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 132/544 (24%), Positives = 240/544 (44%), Gaps = 57/544 (10%)
Query: 49 STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFI--GDQLVSCYLNMGATPDAQLLFDEM 106
S ++ A S L +H VIKS + + G+ ++S Y G T A+ +F+E+
Sbjct: 293 SCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL 352
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 166
+D +S N++++GF+ G + + M+S ++ + T +S+ S C EG
Sbjct: 353 VCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG 412
Query: 167 QYVHCCAVKLGMELQ-VKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQ 225
+ VH V++ M+ + ++V+N++I+MYGK G A LF T +++VSWNSM++ +Q
Sbjct: 413 RAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQ 472
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
NG ++A N LF + + S C L V ++ +C +++
Sbjct: 473 NGFTHKAKN---------LFKEVVSEYS----CSKFSL----STVLAILTSCDSSDSLIF 515
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKP-DKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
++ K+G L ++ +S+ D + +++SG A G E+++ F+ REG
Sbjct: 516 GKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREG 575
Query: 345 -MEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMS------------------------- 376
+ D +T +SA + GLV +G+ H + S
Sbjct: 576 KIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESA 635
Query: 377 -DVYGV--QPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNI 433
V+G+ P L ++C++ L + + +L +N+ EPN + LL AS +
Sbjct: 636 VKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGST 695
Query: 434 SIGKEAAENLIALD-PSDPRNYIMLSNIYSASGLWSDAAKV-RALMKTKVLARNPGCS-- 489
S G +A +LI ++P L ++YS+ G+ KV R + A N S
Sbjct: 696 SYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAH 755
Query: 490 -FIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNM 548
F G K + S+ + + ++S GF+ E S + E+
Sbjct: 756 GFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKP 815
Query: 549 VNKH 552
V +H
Sbjct: 816 VTEH 819
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 143/317 (45%), Gaps = 30/317 (9%)
Query: 96 TPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS 155
TP LFDE+P ++ + +E + + V+
Sbjct: 65 TPIVHNLFDELPERE-----------------------------NRTMESSFMFLRDVLR 95
Query: 156 ACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVS 215
+ + E + VHC A+K G+ + + L+ YG+ G + S+ LF + E++++
Sbjct: 96 SFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIV 155
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
WNSM+ QNGR A+ F M G D T++ A +LHL R +H +
Sbjct: 156 WNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAI 215
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ 335
GL + ++ L+NLY+K L+++ VF + D V+ +++ +G +++Q
Sbjct: 216 ETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQ 275
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKH-YFQVMSDVYGVQPRLDHYSCMVDL 394
+F+ G E D VTF+ ++SACS + G+ + V+ Y + + + ++ +
Sbjct: 276 YFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISM 335
Query: 395 LGRCGLLNDAKELIKNM 411
+CG A+ + + +
Sbjct: 336 YSKCGDTEAAETVFEEL 352
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 36 FHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGA 95
F ++ P + LL A S H +I+ + F+ LV Y + G
Sbjct: 670 FRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGM 729
Query: 96 TPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS 155
+F +WNS++S G M +F + S+ ++E N+ +FIS++S
Sbjct: 730 LETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLS 789
Query: 156 ACALAKAREEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE-QNM 213
AC+ + +EG Y K G++ + +++M G+ G + A++ + E Q
Sbjct: 790 ACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKA 849
Query: 214 VSWNSMVAVCTQNG---------------RPNEAINYFSMMRLNGLFPDEATMVSLLQAC 258
W ++++ C +G P+ A Y S+ T V L
Sbjct: 850 GVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLAN---------TYVGLGGWE 900
Query: 259 ETLHLRRLVE 268
E + LR++VE
Sbjct: 901 EAVRLRKMVE 910
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 217/410 (52%), Gaps = 42/410 (10%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL 143
+ ++ YL +G A+LLFD+M ++D +SWN+++ G+ + + ++FS M +
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN---- 340
Query: 144 ELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFK 203
R+ + N +++ Y G V+ A
Sbjct: 341 -------------------RDAHSW-----------------NMMVSGYASVGNVELARH 364
Query: 204 LFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHL 263
F E++ VSWNS++A +N EA++ F M + G PD T+ SLL A L
Sbjct: 365 YFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVN 424
Query: 264 RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLS 322
RL +H ++ + + + + L+ +YS+ G + S ++F E+ K + + AM+
Sbjct: 425 LRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIG 483
Query: 323 GYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQ 382
GYA HG +EA+ F G+ P H+TF +L+AC+H+GLVDE K F M VY ++
Sbjct: 484 GYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIE 543
Query: 383 PRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAEN 442
P+++HYS +V++ G +A +I +MPFEP+ VWGALL A R+Y+N+ + AAE
Sbjct: 544 PQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEA 603
Query: 443 LIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIE 492
+ L+P Y++L N+Y+ GLW +A++VR M++K + + G S+++
Sbjct: 604 MSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 172/382 (45%), Gaps = 32/382 (8%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
++ + RD F + ++S Y +A LLF++MP ++ VSW+++++GF + G++ +
Sbjct: 126 KLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDS 185
Query: 130 CMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
+ +F M L L + + A GQY + G E V NTLI
Sbjct: 186 AVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVS---GREDLVYAYNTLI 242
Query: 190 NMYGKFGFVDSAFKLFWAMTE---------------QNMVSWNSMVAVCTQNGRPNEAIN 234
YG+ G V++A LF + + +N+VSWNSM+ + G A
Sbjct: 243 VGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARL 302
Query: 235 YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
F M+ D T+ +H+ R+ +A +F+ + + +++ Y+
Sbjct: 303 LFDQMK------DRDTISWNTMIDGYVHVSRMEDAF--ALFSEMPNRDAHSWNMMVSGYA 354
Query: 295 KIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTH 354
+G + + F + + V+ ++++ Y + EA+ F R EG +PD T T
Sbjct: 355 SVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 355 LLSACSHSGLVD--EGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP 412
LLSA +GLV+ G Q++ V V P + ++ ++ + RCG + +++ + M
Sbjct: 415 LLSAS--TGLVNLRLGMQMHQIV--VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 413 FEPNSGVWGALLGASRVYHNIS 434
+ W A++G + N S
Sbjct: 471 LKREVITWNAMIGGYAFHGNAS 492
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 255/468 (54%), Gaps = 6/468 (1%)
Query: 43 PRDPLVSTLL-VALKSSSSLYCCRVIHARVIKSLDYRDG-FIGDQLVSCYLNMGATPDAQ 100
P+ LV++LL + + SS R+ HA V+ ++ + LV YL A
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA-L 159
+FD+M K+ VSW +++SG + + +F M+ + +L N +T +SV+ AC L
Sbjct: 206 HVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE-NLRPNRVTLLSVLPACVEL 264
Query: 160 AKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSM 219
+ +H + + G ++ + MY + G V + LF +++V W+SM
Sbjct: 265 NYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSM 324
Query: 220 VAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL 279
++ + G +E +N + MR G+ + T+++++ AC L VH I CG
Sbjct: 325 ISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGF 384
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFER 339
+I + L+++Y+K G L+A+ +VF E+++ D V+ ++M++ Y +HG G+EA++ F+
Sbjct: 385 MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKG 444
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
I+ G E D + F +LSAC+H+GLV+E + F + Y + L+HY+C ++LLGR G
Sbjct: 445 MIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFG 503
Query: 400 LLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISI-GKEAAENLIALDPSDPRNYIMLS 458
++DA E+ NMP +P++ +W +LL A + + + GK A L+ +P +P NY++LS
Sbjct: 504 KIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLS 563
Query: 459 NIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYS 506
I++ SG + A +VR +M+ + L + G S IE +I + +S
Sbjct: 564 KIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDYQGKSWS 611
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 177/368 (48%), Gaps = 13/368 (3%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK 138
D + + L+S Y + +FDEM ++D VS+ S+++ + G L M + M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 139 SDLDLELNELTFISVISACA-LAKAREEGQYVHCCA-VKLGMELQVKVVNTLINMYGKFG 196
+ +EL S+++ C + + + + H V M+ V + L++MY KF
Sbjct: 141 FYGFIPKSELV-ASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFD 199
Query: 197 FVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
+AF +F M +N VSW +M++ C N ++ F M+ L P+ T++S+L
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLP 259
Query: 257 ACETLHL-RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKV 315
AC L+ LV+ +HG F G + + + +Y + G ++ S +F D V
Sbjct: 260 ACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVV 319
Query: 316 ACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVM 375
++M+SGYA G +E + + +EG+E + VT ++SAC++S L+ V
Sbjct: 320 MWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAS---TVH 376
Query: 376 SDVY--GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNI 433
S + G + + ++D+ +CG L+ A+E+ + E + W +++ A ++ +
Sbjct: 377 SQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHGH- 434
Query: 434 SIGKEAAE 441
G EA E
Sbjct: 435 --GSEALE 440
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 13/216 (6%)
Query: 152 SVISACALAKAREE----GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWA 207
SVI ACA ++E G +HC +K G + V N+LI+MY KF + K+F
Sbjct: 51 SVIKACAF---QQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDE 107
Query: 208 MTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL----HL 263
M ++ VS+ S++ C Q+G EA+ M G P + SLL C + +
Sbjct: 108 MLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKV 167
Query: 264 RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSG 323
R+ A+ V+ + E++ + T L+++Y K A+ VF ++ ++V+ TAM+SG
Sbjct: 168 ARMFHAL--VLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISG 225
Query: 324 YAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSAC 359
+ + F RE + P+ VT +L AC
Sbjct: 226 CVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 240/462 (51%), Gaps = 39/462 (8%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+H +KS + ++G LVS Y G A +F+++P+K V++N+ +SG + G
Sbjct: 151 LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGV 210
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ SVF++M+ E N++TF++ I+ACA + G+ +H +K + + V
Sbjct: 211 MNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT 270
Query: 187 TLINMYGKFGFVDSAFKLFWAMTE-QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
LI+MY K SA+ +F + + +N++SWNS+++ NG+ A+ F + GL
Sbjct: 271 ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLK 330
Query: 246 PDEAT-----------------------------------MVSLLQACETLHLRRLVEAV 270
PD AT + SLL AC + + + +
Sbjct: 331 PDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEI 390
Query: 271 HGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KP-DKVACTAMLSGYAMHG 328
HG + + +I ++T+L+++Y K G + + ++F KP D V M+SGY HG
Sbjct: 391 HGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHG 450
Query: 329 CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY 388
AI+ FE E +EP TFT +LSACSH G V++G F++M + YG +P +H
Sbjct: 451 ECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHI 510
Query: 389 SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDP 448
CM+DLLGR G L +AKE+I M +S +LLG+ R + + +G+EAA L L+P
Sbjct: 511 GCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEP 569
Query: 449 SDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSF 490
+P +++LS+IY+A W D +R ++ K L + PG S
Sbjct: 570 ENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 225/471 (47%), Gaps = 33/471 (7%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R++HA+V+K+ + D F LVS Y+ + DA + DEMP + S N+ VSG +
Sbjct: 51 RILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLEN 110
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G + +F + +N +T SV+ C E G +HC A+K G E++V V
Sbjct: 111 GFCRDAFRMFGDARVS-GSGMNSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYV 166
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMR-LNG 243
+L++MY + G A ++F + +++V++N+ ++ +NG N + F++MR +
Sbjct: 167 GTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSS 226
Query: 244 LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
P++ T V+ + AC +L + +HG++ + T L+++YSK ++
Sbjct: 227 EEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAY 286
Query: 304 KVFAEISKP-DKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHS 362
VF E+ + ++ +++SG ++G A++ FE+ EG++PD T+ L+S S
Sbjct: 287 IVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQL 346
Query: 363 GLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG---LLNDAKEL---IKNMPFEPN 416
G V E +F+ M V V P L C+ LL C L + KE+ + E +
Sbjct: 347 GKVIEAFKFFERMLSVVMV-PSL---KCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERD 402
Query: 417 SGVWGALLGASRVYHNISIGKEAAE--NLIALDPSDPRNYIMLSNIYSASGLWSDAAKVR 474
V +L+ +Y + A + P DP + ++ + Y G A ++
Sbjct: 403 IFVLTSLID---MYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIF 459
Query: 475 ALMK-----------TKVLARNPGCSFIEHGNKIHRFVVDDYSH-PDSDKI 513
L++ T VL+ C +E G++I R + ++Y + P ++ I
Sbjct: 460 ELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHI 510
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 4/216 (1%)
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF 205
N+ TF ++ +CA +G+ +H VK G + V L++MY K V A K+
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRR 265
M E+ + S N+ V+ +NG +A F R++G + T+ S+L C +
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGM 149
Query: 266 LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYA 325
+H + G + + + T+L+++YS+ G + ++F ++ V A +SG
Sbjct: 150 ---QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLM 206
Query: 326 MHGCGTEAIQFFERTIR-EGMEPDHVTFTHLLSACS 360
+G F + EP+ VTF + ++AC+
Sbjct: 207 ENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 7/244 (2%)
Query: 35 RFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMG 94
R S+ P +++LL A +L + IH VIK+ RD F+ L+ Y+ G
Sbjct: 358 RMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCG 417
Query: 95 ATPDAQLLFD--EMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 152
+ A+ +FD E KD V WN ++SG+ K G+ + + +F +++ + +E + TF +
Sbjct: 418 LSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREE-KVEPSLATFTA 476
Query: 153 VISACALAKAREEG-QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
V+SAC+ E+G Q + G + + + +I++ G+ G + A ++ M+E
Sbjct: 477 VLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEP 536
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDE-ATMVSLLQACETLHLRRLVEAV 270
+ ++S++ C Q+ P + + M+L L P+ A V L L VE++
Sbjct: 537 SSSVYSSLLGSCRQHLDP--VLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESI 594
Query: 271 HGVI 274
VI
Sbjct: 595 RQVI 598
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/532 (29%), Positives = 267/532 (50%), Gaps = 47/532 (8%)
Query: 36 FHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDG-FIGDQLVSCYLNMG 94
+ S+ + P T L +K+SS L + IH +I S G ++ + LV Y+ +G
Sbjct: 121 YSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELG 180
Query: 95 ATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVI 154
A+ +F MP+ D S+N ++ G++K+G + ++ M SD +E +E T +S++
Sbjct: 181 NFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSD-GIEPDEYTVLSLL 239
Query: 155 SACALAKAREEGQYVHCCAVKLGMELQVKVV--NTLINMYGK------------------ 194
C G+ VH + G ++ N L++MY K
Sbjct: 240 VCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKD 299
Query: 195 --------FGFV-----DSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAIN--YFSMM 239
GFV ++A +F M ++++VSWNS++ ++ G + ++ M
Sbjct: 300 MRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMT 359
Query: 240 RLNGLFPDEATMVSLLQAC----ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSK 295
+ + PD TMVSL+ E H R VHG++ L + + + L+++Y K
Sbjct: 360 IVEKVKPDRVTMVSLISGAANNGELSHGR----WVHGLVIRLQLKGDAFLSSALIDMYCK 415
Query: 296 IGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHL 355
G + + VF ++ D T+M++G A HG G +A+Q F R EG+ P++VT +
Sbjct: 416 CGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAV 475
Query: 356 LSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELI-KNMPFE 414
L+ACSHSGLV+EG H F M D +G P +HY +VDLL R G + +AK+++ K MP
Sbjct: 476 LTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMR 535
Query: 415 PNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVR 474
P+ +WG++L A R +I + A L+ L+P Y++LSNIY+ G W + K R
Sbjct: 536 PSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTR 595
Query: 475 ALMKTKVLARNPGCSFIEHGNKIHRFV-VDDYSHPDSDKIHKKLEEVMSKIQ 525
M+ + + + G S + +HRFV + +HP +I + L+ + ++++
Sbjct: 596 EAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 194/425 (45%), Gaps = 56/425 (13%)
Query: 99 AQLLF-DEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 157
A+LLF + PN + +N+++S S + C ++S M + + TF+ ++ A
Sbjct: 87 AKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRH-RVSPDRQTFLYLMKAS 143
Query: 158 ALAKAREEGQYVHCCAVKLG-MELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSW 216
+ E + +HC + G + L + N+L+ Y + G A K+F M ++ S+
Sbjct: 144 SFL---SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSF 200
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT 276
N M+ + G EA+ + M +G+ PDE T++SLL C L RL + VHG I
Sbjct: 201 NVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIER 260
Query: 277 CG--LDENITIVTTLLNLYSK-------------------------------IGRLNASC 303
G N+ + LL++Y K +G + A+
Sbjct: 261 RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQ 320
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQ--FFERTIREGMEPDHVTFTHLLSACSH 361
VF ++ K D V+ ++L GY+ GC ++ F+E TI E ++PD VT L+S ++
Sbjct: 321 AVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAAN 380
Query: 362 SGLVDEGKHYFQVMSDVYGVQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMPFEPNSGV 419
+G + G+ V V +Q + D + S ++D+ +CG++ A + K E + +
Sbjct: 381 NGELSHGR---WVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT-EKDVAL 436
Query: 420 WGALLGASRVYHNISIGKEAAE--NLIALDPSDPRNYIMLSNIY--SASGLWSDAAKVRA 475
W +++ + N G++A + + + P N +L+ + S SGL + V
Sbjct: 437 WTSMITGLAFHGN---GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFN 493
Query: 476 LMKTK 480
MK K
Sbjct: 494 HMKDK 498
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 7/174 (4%)
Query: 198 VDSAFKLFWAMTEQ-NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
+D A LF T N+ +N+M++ + + NE +S M + + PD T + L++
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSS--KNECFGLYSSMIRHRVSPDRQTFLYLMK 141
Query: 257 ACETLHLRRLVEAVHGVIFTCG-LDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKV 315
A L V+ +H I G L + +L+ Y ++G + KVFA + PD
Sbjct: 142 ASSFLSE---VKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS 198
Query: 316 ACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
+ M+ GYA G EA++ + + + +G+EPD T LL C H + GK
Sbjct: 199 SFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 233/449 (51%), Gaps = 8/449 (1%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R++H +++K+ D + L++ YL G + + + +PNKD V W ++SG +
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRL 324
Query: 125 GDLGNCMSVFSVM---KSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQ 181
G + VFS M SDL E SV+++CA + + G VH ++ G L
Sbjct: 325 GRAEKALIVFSEMLQSGSDLSSE----AIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 182 VKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRL 241
+N+LI MY K G +D + +F M E+++VSWN++++ QN +A+ F M+
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 242 NGLFP-DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
+ D T+VSLLQAC + + + +H ++ + + T L+++YSK G L
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLE 500
Query: 301 ASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
A+ + F IS D V+ +++GY HG G A++ + + GMEP+HV F +LS+CS
Sbjct: 501 AAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCS 560
Query: 361 HSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVW 420
H+G+V +G F M +GV+P +H +C+VDLL R + DA + K P+ V
Sbjct: 561 HNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVL 620
Query: 421 GALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTK 480
G +L A R + E++I L P D +Y+ L + ++A W D ++ M++
Sbjct: 621 GIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSL 680
Query: 481 VLARNPGCSFIEHGNKIHRFVVDDYSHPD 509
L + PG S IE K F ++ SH D
Sbjct: 681 GLKKLPGWSKIEMNGKTTTFFMNHTSHSD 709
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 212/441 (48%), Gaps = 14/441 (3%)
Query: 26 CTLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHA-RVIKSLDYRDGFIGD 84
C+L++E +RF I P TLL L + + +H VI D D + +
Sbjct: 132 CSLVNE--MRFQGIKPGP-----VTLLEMLSGVLEITQLQCLHDFAVIYGFDC-DIAVMN 183
Query: 85 QLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLE 144
+++ Y DA+ LFD+M +D VSWN+++SG++ G++ + + M+ D L
Sbjct: 184 SMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD-GLR 242
Query: 145 LNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKL 204
++ TF + +S E G+ +HC VK G ++ + + LI MY K G ++++++
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 205 FWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLR 264
+ +++V W M++ + GR +A+ FS M +G + S++ +C L
Sbjct: 303 LETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 265 RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGY 324
L +VHG + G + + +L+ +Y+K G L+ S +F +++ D V+ A++SGY
Sbjct: 363 DLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGY 422
Query: 325 AMHGCGTEAIQFFER-TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQP 383
A + +A+ FE + + D T LL ACS +G + GK ++ + ++P
Sbjct: 423 AQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRP 481
Query: 384 RLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENL 443
+ +VD+ +CG L A+ ++ ++ + WG L+ + I E
Sbjct: 482 CSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEF 540
Query: 444 IALDPSDPRNYIMLSNIYSAS 464
+ +P + I L+ + S S
Sbjct: 541 LH-SGMEPNHVIFLAVLSSCS 560
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 178/386 (46%), Gaps = 10/386 (2%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P +LL A S L IH +V+ + D +I LV+ Y G A+ +
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKV 103
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F+EM +D V W +++ +S+ G +G S+ + M+ ++ +T + ++S
Sbjct: 104 FEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQ-GIKPGPVTLLEMLSGVL---E 159
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
+ Q +H AV G + + V+N+++N+Y K V A LF M +++MVSWN+M++
Sbjct: 160 ITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
G +E + MR +GL PD+ T + L T+ + +H I G D +
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVD 279
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
+ + T L+ +Y K G+ AS +V I D V T M+SG G +A+ F ++
Sbjct: 280 MHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGL 400
G + ++++C+ G D G H + + P L+ ++ + +CG
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN---SLITMYAKCGH 396
Query: 401 LNDAKELIKNMPFEPNSGVWGALLGA 426
L+ + + + M E + W A++
Sbjct: 397 LDKSLVIFERMN-ERDLVSWNAIISG 421
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 149/300 (49%), Gaps = 7/300 (2%)
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCA 173
+NS ++ S GD +S FS M ++ L + TF S++ ACA + G +H
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLAN-KLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 174 VKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAI 233
+ G + ++L+N+Y KFG + A K+F M E+++V W +M+ ++ G EA
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 234 NYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLY 293
+ + MR G+ P T++ +L L + +L + +H G D +I ++ ++LNLY
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSG--VLEITQL-QCLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 294 SKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFT 353
K + + +F ++ + D V+ M+SGYA G +E ++ R +G+ PD TF
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 354 HLLSACSHSGLVDEGKH-YFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP 412
LS ++ G+ + Q++ + V L + ++ + +CG + +++ +P
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK--TALITMYLKCGKEEASYRVLETIP 307
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 242/465 (52%), Gaps = 34/465 (7%)
Query: 28 LLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLV 87
++ +S +S R+ L++TLL + +SL R IH + +S I DQ
Sbjct: 30 FVTTSSSSVTPLSPQDRNKLLATLL---SNCTSLARVRRIHGDIFRSR------ILDQYP 80
Query: 88 SCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNE 147
+L WN+++ + + + + V+ M L +
Sbjct: 81 IAFL----------------------WNNIMRSYIRHESPLDAIQVYLGMVRSTVLP-DR 117
Query: 148 LTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWA 207
+ VI A G+ +H AV+LG + I +Y K G ++A K+F
Sbjct: 118 YSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDE 177
Query: 208 MTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLV 267
E+ + SWN+++ GR NEA+ F M+ +GL PD+ TMVS+ +C L L
Sbjct: 178 NPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLA 237
Query: 268 EAVHGVIFTCGLDE--NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYA 325
+H + +E +I ++ +L+++Y K GR++ + +F E+ + + V+ ++M+ GYA
Sbjct: 238 FQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYA 297
Query: 326 MHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRL 385
+G EA++ F + G+ P+ +TF +LSAC H GLV+EGK YF +M + ++P L
Sbjct: 298 ANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGL 357
Query: 386 DHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIA 445
HY C+VDLL R G L +AK++++ MP +PN VWG L+G + ++ + + A ++
Sbjct: 358 SHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVE 417
Query: 446 LDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSF 490
L+P + Y++L+N+Y+ G+W D +VR LMKTK +A+ P S+
Sbjct: 418 LEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 138/450 (30%), Positives = 231/450 (51%), Gaps = 50/450 (11%)
Query: 68 HARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDL 127
H +V++ + ++ + L+ + N G A LFD+ V+W+S+ SG++KRG +
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 128 GNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNT 187
M +F M +++ + +I+ C K
Sbjct: 195 DEAMRLFDEMPYK-----DQVAWNVMITGCLKCKE------------------------- 224
Query: 188 LINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPD 247
+DSA +LF TE+++V+WN+M++ G P EA+ F MR G PD
Sbjct: 225 ----------MDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPD 274
Query: 248 EATMVSLLQACETLHLRRLVEAVHGVIF-TCGLDENITIVT----TLLNLYSKIGRLNAS 302
T++SLL AC L + +H I T + +I + T L+++Y+K G ++ +
Sbjct: 275 VVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRA 334
Query: 303 CKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHS 362
+VF + D ++ G A+H +I+ FE R + P+ VTF ++ ACSHS
Sbjct: 335 IEVFRGVKDRDLSTWNTLIVGLALHHA-EGSIEMFEEMQRLKVWPNEVTFIGVILACSHS 393
Query: 363 GLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGA 422
G VDEG+ YF +M D+Y ++P + HY CMVD+LGR G L +A +++M EPN+ VW
Sbjct: 394 GRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRT 453
Query: 423 LLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVL 482
LLGA ++Y N+ +GK A E L+++ + +Y++LSNIY+++G W KVR + +
Sbjct: 454 LLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRV 513
Query: 483 ARNPGCSFIEHGNK--IHRFVVDDYSHPDS 510
+ G S IE + + R+++ S P+S
Sbjct: 514 KKPTGVSLIEEDDDKLMMRYLLS--SEPES 541
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 14/276 (5%)
Query: 167 QYVHCCAVKLGMELQVKVVNTLI--NMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCT 224
+ +H V G+ + VV LI G + A KLF + + ++ N ++
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENIT 284
Q+ +P + ++ ++ M G+ PD T +L+AC L R A HG + G N
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
+ L+ ++ G L + ++F + +K KVA ++M SGYA G EA++ F+ E
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFD----EM 204
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
D V + +++ C +D + F ++ V ++ M+ CG +A
Sbjct: 205 PYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVT-----WNAMISGYVNCGYPKEA 259
Query: 405 KELIKNM---PFEPNSGVWGALLGASRVYHNISIGK 437
+ K M P+ +LL A V ++ GK
Sbjct: 260 LGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGK 295
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 247/499 (49%), Gaps = 41/499 (8%)
Query: 56 KSSSSLYCCRVIHARVIK-SLDYRDGFIGDQLVSCYLNMGATPD-AQLLFDEMPNKDFVS 113
KS S LY IH +I L + F+ L L+ D A ++ +
Sbjct: 19 KSMSELY---KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYG 75
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCA 173
WN ++ GFS + +SV+ M L + +T+ ++ + + R+ G +HC
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLR-FGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSV 134
Query: 174 VKLGMELQVKVVNTLINMYGKFGFVDSAFKLF----------W----------------- 206
VK G+E + + NTLI+MYG F SA KLF W
Sbjct: 135 VKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSAR 194
Query: 207 ----AMTEQNMVSWNSMVAVCTQNGRPNEAINYF-SMMRLNGLFPDEATMVSLLQACETL 261
M+E+++V+W+SM+ + G N+A+ F MMR+ +E TMVS++ AC L
Sbjct: 195 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 262 HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF--AEISKPDKVACTA 319
+ VH I L + + T+L+++Y+K G + + VF A + + D + A
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 320 MLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVY 379
++ G A HG E++Q F + ++PD +TF LL+ACSH GLV E H+F+ + +
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES- 373
Query: 380 GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEA 439
G +P+ +HY+CMVD+L R GL+ DA + I MP +P + GALL + N+ + +
Sbjct: 374 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV 433
Query: 440 AENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHR 499
+ LI L P + Y+ L+N+Y+ + + A +R M+ K + + G S ++ HR
Sbjct: 434 GKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHR 493
Query: 500 FVVDDYSHPDSDKIHKKLE 518
F+ D +H SDKI+ L+
Sbjct: 494 FIAHDKTHFHSDKIYAVLQ 512
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 230/430 (53%), Gaps = 9/430 (2%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+H IK+ + + + ++ Y + A +F+ + KD V+WN+++S +++
Sbjct: 310 VHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKL 369
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+ MSV+ M + ++ +E TF S+++ E V C +K G+ ++++ N
Sbjct: 370 GKSAMSVYKRMHI-IGVKPDEFTFGSLLATSLDLDVLE---MVQACIIKFGLSSKIEISN 425
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG--L 244
LI+ Y K G ++ A LF +N++SWN++++ NG P E + FS + + +
Sbjct: 426 ALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRI 485
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
PD T+ +LL C + L H + G + I L+N+YS+ G + S +
Sbjct: 486 LPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLE 545
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG-MEPDHVTFTHLLSACSHSG 363
VF ++S+ D V+ +++S Y+ HG G A+ ++ EG + PD TF+ +LSACSH+G
Sbjct: 546 VFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAG 605
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIK--NMPFEPNSGVWG 421
LV+EG F M + +GV +DH+SC+VDLLGR G L++A+ L+K VW
Sbjct: 606 LVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWW 665
Query: 422 ALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKV 481
AL A + ++ +GK A+ L+ + DP Y+ LSNIY+ +G+W +A + R +
Sbjct: 666 ALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIG 725
Query: 482 LARNPGCSFI 491
+ GCS++
Sbjct: 726 AMKQRGCSWM 735
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 188/376 (50%), Gaps = 24/376 (6%)
Query: 60 SLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDE--MPNKDFVSWNSL 117
SL + +H+ VIK+ + + + L++ Y N DA L+F+E + +D V++N +
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 118 VSGFS--KRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVK 175
+ G + KR + + VF M + L +LTF+SV+ +C+ A G VH A+K
Sbjct: 264 IDGLAGFKRDE---SLLVFRKML-EASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIK 316
Query: 176 LGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINY 235
G E V N + MY F +A K+F ++ E+++V+WN+M++ Q A++
Sbjct: 317 TGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSV 376
Query: 236 FSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSK 295
+ M + G+ PDE T SLL L + +V+A I GL I I L++ YSK
Sbjct: 377 YKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQA---CIIKFGLSSKIEISNALISAYSK 433
Query: 296 IGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFF----ERTIREGMEPDHVT 351
G++ + +F + + ++ A++SG+ +G E ++ F E +R + PD T
Sbjct: 434 NGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR--ILPDAYT 491
Query: 352 FTHLLSAC-SHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKN 410
+ LLS C S S L+ + + V+ +G + ++++ +CG + ++ E+
Sbjct: 492 LSTLLSICVSTSSLMLGSQTHAYVLR--HGQFKETLIGNALINMYSQCGTIQNSLEVFNQ 549
Query: 411 MPFEPNSGVWGALLGA 426
M E + W +L+ A
Sbjct: 550 MS-EKDVVSWNSLISA 564
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 178/406 (43%), Gaps = 20/406 (4%)
Query: 75 LDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVS-WNSLVSGFSKRGDLGNCMSV 133
+D D + L+S +G A +FD+MP +D V+ WN++++G + G + +
Sbjct: 118 IDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVEL 177
Query: 134 FSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYG 193
F M L + ++ F +++S C + + G+ VH +K G + VVN LI MY
Sbjct: 178 FREMHK-LGVRHDKFGFATILSMCDYG-SLDFGKQVHSLVIKAGFFIASSVVNALITMYF 235
Query: 194 KFGFVDSAFKLFWA--MTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATM 251
V A +F + ++ V++N ++ R +E++ F M L P + T
Sbjct: 236 NCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTF 294
Query: 252 VSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK 311
VS++ +C + VHG+ G ++ + + +YS A+ KVF + +
Sbjct: 295 VSVMGSCSCAAMGH---QVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEE 351
Query: 312 PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHY 371
D V M+S Y G A+ ++R G++PD TF LL+ +++
Sbjct: 352 KDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE----M 407
Query: 372 FQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYH 431
Q +G+ +++ + ++ + G + A +L+ N W A++ S YH
Sbjct: 408 VQACIIKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAII--SGFYH 464
Query: 432 NISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALM 477
N E E L S+ R +L + Y+ S L S +LM
Sbjct: 465 N-GFPFEGLERFSCLLESEVR---ILPDAYTLSTLLSICVSTSSLM 506
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P +STLL S+SSL HA V++ +++ IG+ L++ Y G ++ +
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F++M KD VSWNSL+S +S+ G+ N ++ + M+ + + + TF +V+SAC+ A
Sbjct: 547 FNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGL 606
Query: 163 REEGQYVHCCAVKL-GMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVS----WN 217
EEG + V+ G+ V + L+++ G+ G +D A L ++E+ + S W
Sbjct: 607 VEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV-KISEKTIGSRVDVWW 665
Query: 218 SMVAVCTQNG 227
++ + C +G
Sbjct: 666 ALFSACAAHG 675
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 217/400 (54%), Gaps = 16/400 (4%)
Query: 102 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD-----LELNELTFISVISA 156
+ ++PN +N+L+S + FS+ L + NE T+ S+ A
Sbjct: 62 ILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA 121
Query: 157 CAL-AKAREEGQYVHCCAVKLGMELQVK--VVNTLINMYGKFGFVDSAFKLFWAMTEQNM 213
A+ G+ +H +K + V L+ Y G + A LF + E ++
Sbjct: 122 SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDL 181
Query: 214 VSWNSMVAVCTQNGRPN---EAINYFSMMRLNGLFPDEATMVSLLQACETL-HLRRLVEA 269
+WN+++A + + E + F M++ P+E ++V+L+++C L R V A
Sbjct: 182 ATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWA 238
Query: 270 VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC 329
H + L N + T+L++LYSK G L+ + KVF E+S+ D AM+ G A+HG
Sbjct: 239 -HVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGF 297
Query: 330 GTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS 389
G E I+ ++ I +G+ PD TF +SACSHSGLVDEG F M VYG++P+++HY
Sbjct: 298 GQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYG 357
Query: 390 CMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPS 449
C+VDLLGR G L +A+E IK MP +PN+ +W + LG+S+ + + G+ A ++L+ L+
Sbjct: 358 CLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFE 417
Query: 450 DPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCS 489
+ NY++LSNIY+ W+D K R LMK + ++PG S
Sbjct: 418 NSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 38/326 (11%)
Query: 65 RVIHARVIKSLD--YRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFS 122
R +HA V+K L+ D F+ LV Y N G +A+ LF+ + D +WN+L++ ++
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYA 192
Query: 123 KRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQV 182
++ + V ++ + + NEL+ +++I +CA G + H +K + L
Sbjct: 193 NSEEIDSDEEVL-LLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQ 251
Query: 183 KVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLN 242
V +LI++Y K G + A K+F M+++++ +N+M+ +G E I + +
Sbjct: 252 FVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQ 311
Query: 243 GLFPDEATMVSLLQAC-------ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSK 295
GL PD AT V + AC E L + ++AV+G+ + + L++L +
Sbjct: 312 GLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGI------EPKVEHYGCLVDLLGR 365
Query: 296 IGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTH 354
GRL + + ++ KP+ + L HG FER + H
Sbjct: 366 SGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGD-------FER--------GEIALKH 410
Query: 355 LLSACSHSGLVDEGKHYFQVMSDVYG 380
LL GL E + ++S++Y
Sbjct: 411 LL------GLEFENSGNYVLLSNIYA 430
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 225/418 (53%), Gaps = 12/418 (2%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
L +C+ + G + +F +P +WN+++SG+S +S F M+ +L+
Sbjct: 357 LGACFRS-GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ-NLKP 414
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF 205
++ T ++S+CA + E G+ +H ++ + +V+ LI +Y + ++ + +F
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIF 474
Query: 206 W-AMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF-PDEATMVSLLQACETL-- 261
+ E ++ WNSM++ N +A+ F M + P+E + ++L +C L
Sbjct: 475 DDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCS 534
Query: 262 --HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTA 319
H R+ HG++ G + + T L ++Y K G ++++ + F + + + V
Sbjct: 535 LLHGRQF----HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNE 590
Query: 320 MLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVY 379
M+ GY +G G EA+ + + I G +PD +TF +L+ACSHSGLV+ G M ++
Sbjct: 591 MIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIH 650
Query: 380 GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEA 439
G++P LDHY C+VD LGR G L DA++L + P++ +S +W LL + RV+ ++S+ +
Sbjct: 651 GIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRV 710
Query: 440 AENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKI 497
AE L+ LDP Y++LSN YS+ W D+A ++ LM + + PG S+ +GN +
Sbjct: 711 AEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 171/355 (48%), Gaps = 16/355 (4%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
+V + RD + + ++ +G +A +FD MP +D VSWN+++S ++G
Sbjct: 62 KVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEK 121
Query: 130 CMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
+ V+ M D L + T SV+SAC+ G H AVK G++ + V N L+
Sbjct: 122 ALVVYKRMVCDGFLP-SRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALL 180
Query: 190 NMYGKFGF-VDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDE 248
+MY K GF VD ++F ++++ N VS+ +++ + + EA+ F +M G+ D
Sbjct: 181 SMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDS 240
Query: 249 ATMVSLL------QACETL---HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRL 299
+ ++L + C++L + L + +H + G ++ + +LL +Y+K +
Sbjct: 241 VCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDM 300
Query: 300 NASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSAC 359
N + +FAE+ + + V+ M+ G+ ++++F R G +P+ VT +L AC
Sbjct: 301 NGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC 360
Query: 360 SHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFE 414
SG V+ G+ F + QP + ++ M+ +A + M F+
Sbjct: 361 FRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ 410
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 149/318 (46%), Gaps = 46/318 (14%)
Query: 68 HARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQL-LFDEMPNKDFVSWNSLVSGFSKRGD 126
H +K+ ++ F+G+ L+S Y G D + +F+ + + VS+ +++ G ++
Sbjct: 161 HGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENK 220
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKA---------REEGQYVHCCAVKLG 177
+ + +F +M + ++++ + +++S A + E G+ +HC A++LG
Sbjct: 221 VLEAVQMFRLM-CEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLG 279
Query: 178 MELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFS 237
+ + N+L+ +Y K ++ A +F M E N+VSWN M+ Q R ++++ + +
Sbjct: 280 FGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLT 339
Query: 238 MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
MR +G P+E T +S+L AC + G
Sbjct: 340 RMRDSGFQPNEVTCISVLGAC-----------------------------------FRSG 364
Query: 298 RLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLS 357
+ ++F+ I +P A AMLSGY+ + EAI F + + ++PD T + +LS
Sbjct: 365 DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILS 424
Query: 358 ACSHSGLVDEGKHYFQVM 375
+C+ ++ GK V+
Sbjct: 425 SCARLRFLEGGKQIHGVV 442
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 4/196 (2%)
Query: 35 RFHSISTY-PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNM 93
R H + P + +T+L + SL R H V+KS D F+ L Y
Sbjct: 508 RMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKC 567
Query: 94 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
G A+ FD + K+ V WN ++ G+ G + ++ M S + + + +TF+SV
Sbjct: 568 GEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSV 626
Query: 154 ISACALAKAREEGQYVHCCAVKL-GMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQ 211
++AC+ + E G + ++ G+E ++ +++ G+ G ++ A KL A +
Sbjct: 627 LTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKS 686
Query: 212 NMVSWNSMVAVCTQNG 227
+ V W +++ C +G
Sbjct: 687 SSVLWEILLSSCRVHG 702
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 220/416 (52%), Gaps = 2/416 (0%)
Query: 77 YRDGFIGDQLVSCYLNMGAT-PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFS 135
Y + + +LV Y + P + +F MP ++ SWN ++ FS+ G + +F
Sbjct: 63 YSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFL 122
Query: 136 VMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKF 195
M + + ++ T ++ AC+ ++ + G +H +KLG + V + L+ MY
Sbjct: 123 RMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDM 182
Query: 196 GFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
G + A KLF M ++ V + +M Q G + F M +G D MVSLL
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 242
Query: 256 QACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKV 315
AC L + ++VHG + + + ++Y K L+ + VF +S+ D +
Sbjct: 243 MACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVI 302
Query: 316 ACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVM 375
+ ++++ GY + G + + F+ ++EG+EP+ VTF +LSAC+H GLV++ YF++M
Sbjct: 303 SWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM 362
Query: 376 SDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISI 435
+ Y + P L HY+ + D + R GLL +A++ +++MP +P+ V GA+L +VY N+ +
Sbjct: 363 QE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEV 421
Query: 436 GKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFI 491
G+ A LI L P Y+ L+ +YSA+G + +A +R MK K +++ PGCS I
Sbjct: 422 GERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 150/529 (28%), Positives = 266/529 (50%), Gaps = 63/529 (11%)
Query: 9 FMTLTLSPRILHCLPTCCTLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLY------ 62
F ++SPRIL P+ + ST+P VS+L A + +L
Sbjct: 4 FRFTSISPRIL---PS------------NHYSTFPLKQNVSSLSPAKYIAGALQEHINSP 48
Query: 63 ---CCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVS 119
+ IHA +IK+ D I +L+ +L G A+ +FDE+P ++N ++S
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 120 GFSKRGDLGNCMSV-----FSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAV 174
G+ K G + + + +S K+D L+ + S + R + VH +
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKAD-GYTLSMVLKASNSRGSTMILPRSLCRLVHARII 167
Query: 175 KLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQN---------------------- 212
K +EL ++ L++ Y K G ++SA +F M ++N
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 213 ---------MVSWNSMVAVCTQNGR-PNEAINYFSMMRLNGLFPDEATMVSLLQACETLH 262
+V +N+MV +++G +++ + M+ G P+ +T S++ AC L
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 263 LRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLS 322
+ + VH I G+ +I + ++LL++Y+K G +N + +VF ++ + + + T+M+
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 323 GYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQ 382
GY +G EA++ F R +EP++VTF LSACSHSGLVD+G F+ M Y ++
Sbjct: 348 GYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMK 407
Query: 383 PRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAEN 442
P+++HY+C+VDL+GR G LN A E + MP P+S +W ALL + ++ N+ + AA
Sbjct: 408 PKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASE 467
Query: 443 LIALDPSD-PRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSF 490
L L+ P Y+ LSN+Y+++ W + +K+R +MK + +++ G S+
Sbjct: 468 LFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 222/424 (52%), Gaps = 11/424 (2%)
Query: 50 TLLVALKSSSSLYCCRVIHARVIKSLDYRDGF-----IGDQLVSCYLNMGATPDAQLLFD 104
+ + LKS S C + + + R GF + + L+ Y G DA+ +FD
Sbjct: 127 SFITTLKSCSRELCVSI--GEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFD 184
Query: 105 EMPNK-DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAR 163
EMP D V++++L++G+ + + +F +M+ ++ +N T +S +SA +
Sbjct: 185 EMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS-EVVVNVSTLLSFLSAISDLGDL 243
Query: 164 EEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVC 223
+ H +K+G++L + ++ LI MYGK G + SA ++F +++V+WN M+
Sbjct: 244 SGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQY 303
Query: 224 TQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENI 283
+ G E + M+ + P+ +T V LL +C + V ++ + +
Sbjct: 304 AKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDA 363
Query: 284 TIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE 343
+ T L+++Y+K+G L + ++F + D + TAM+SGY HG EA+ F + E
Sbjct: 364 ILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEE 423
Query: 344 G--MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
+ P+ +TF +L+ACSH GLV EG F+ M + Y P+++HY C+VDLLGR G L
Sbjct: 424 NCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQL 483
Query: 402 NDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIY 461
+A ELI+N+P +S W ALL A RVY N +G+ L + + P + I+L+ +
Sbjct: 484 EEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTH 543
Query: 462 SASG 465
+ +G
Sbjct: 544 AVAG 547
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 185/382 (48%), Gaps = 9/382 (2%)
Query: 46 PLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDE 105
P L+ L+S IH ++K+ +D F +L++ + ++ A +F+
Sbjct: 26 PQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEH 84
Query: 106 MPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
+ N + +N+++ G+S + SVF+ +++ L L+ +FI+ + +C+
Sbjct: 85 VSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAK-GLTLDRFSFITTLKSCSRELCVSI 143
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ-NMVSWNSMVAVCT 224
G+ +H A++ G + + N LI+ Y G + A K+F M + + V++++++
Sbjct: 144 GEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYL 203
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENIT 284
Q + A++ F +MR + + + +T++S L A L E+ H + GLD ++
Sbjct: 204 QVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLH 263
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
++T L+ +Y K G ++++ ++F + D V M+ YA G E + + E
Sbjct: 264 LITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEK 323
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY--SCMVDLLGRCGLLN 402
M+P+ TF LLS+C++S G+ ++ + + LD + +VD+ + GLL
Sbjct: 324 MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEE---ERIALDAILGTALVDMYAKVGLLE 380
Query: 403 DAKELIKNMPFEPNSGVWGALL 424
A E+ M + + W A++
Sbjct: 381 KAVEIFNRMK-DKDVKSWTAMI 401
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 250/481 (51%), Gaps = 11/481 (2%)
Query: 37 HSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIK-SLDYRDGFIGDQLVSCYLNMGA 95
H T P V+++L A + R +H I+ D D F+ + L+ Y
Sbjct: 218 HEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFD 277
Query: 96 TPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS 155
A +FDE ++ VSWNS+++GF + +F +M + +E++E+T +S++
Sbjct: 278 VDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA-VEVDEVTVVSLLR 336
Query: 156 ACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVS 215
C + + +H ++ G E +++LI+ Y VD A + +MT +++VS
Sbjct: 337 VCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVS 396
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
++M++ GR +EAI+ F MR P+ T++SLL AC R + HG+
Sbjct: 397 CSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAI 453
Query: 276 TCGLDEN-ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAI 334
L N I++ T++++ Y+K G + + + F +I++ + ++ T ++S YA++G +A+
Sbjct: 454 RRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKAL 513
Query: 335 QFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDL 394
F+ ++G P+ VT+ LSAC+H GLV +G F+ M + +P L HYSC+VD+
Sbjct: 514 ALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVE-EDHKPSLQHYSCIVDM 572
Query: 395 LGRCGLLNDAKELIKNMPFEPNSG--VWGALLGASR-VYHNISIGKEAAENLIALDPSDP 451
L R G ++ A ELIKN+P + +G WGA+L R + + I E ++ L+P
Sbjct: 573 LSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCS 632
Query: 452 RNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVV-DDYSHPDS 510
Y++ S+ ++A W D A +R L+K + + G S + GN RF+ D S DS
Sbjct: 633 SGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDS 692
Query: 511 D 511
+
Sbjct: 693 E 693
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 200/397 (50%), Gaps = 15/397 (3%)
Query: 36 FHSISTYPRDPLVSTLLVALKSSSSLYC-CRVIHARVIKSLDYRDGFIG-DQLVSCYLNM 93
F + + +P STL++ + + SL+ IH VI+S GF G + + L M
Sbjct: 115 FSKLRVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRS-----GFCGISSVQNSILCM 169
Query: 94 GATPD---AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTF 150
A D A+ LFDEM +D +SW+ ++ + + + + +F M + E + +T
Sbjct: 170 YADSDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTV 229
Query: 151 ISVISACALAKAREEGQYVHCCAVKLGMEL-QVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
SV+ AC + + + G+ VH +++ G +L V V N+LI+MY K VDSAF++F T
Sbjct: 230 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 289
Query: 210 EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA 269
+N+VSWNS++A N R +EA+ F +M + DE T+VSLL+ C+ ++
Sbjct: 290 CRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS 349
Query: 270 VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC 329
+HGVI G + N +++L++ Y+ ++ + V ++ D V+C+ M+SG A G
Sbjct: 350 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGR 409
Query: 330 GTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS 389
EAI F +R+ P+ +T LL+ACS S + K + + +
Sbjct: 410 SDEAISIFCH-MRD--TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGT 466
Query: 390 CMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
+VD +CG + A+ + E N W ++ A
Sbjct: 467 SIVDAYAKCGAIEMARRTFDQIT-EKNIISWTVIISA 502
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
N++ + Y K G + S + F M ++ VSWN +V G E + +FS +R+ G
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
P+ +T+V ++ AC +L E +HG + G ++ ++L +Y+ L+A K+
Sbjct: 125 PNTSTLVLVIHACRSLWFDG--EKIHGYVIRSGFCGISSVQNSILCMYADSDSLSAR-KL 181
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG-MEPDHVTFTHLLSACSHSGL 364
F E+S+ D ++ + ++ Y ++ F+ + E EPD VT T +L AC+
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 365 VDEGK--HYFQV-----MSDVYGVQPRLDHYSCMVDL 394
+D G+ H F + ++DV+ +D YS D+
Sbjct: 242 IDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDV 278
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 207/373 (55%), Gaps = 20/373 (5%)
Query: 152 SVISACALAKARE----EGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWA 207
SV+ A ++ A++ +G+ +H KLG +++ +L+ Y G VD A ++F
Sbjct: 66 SVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDE 125
Query: 208 MTE-QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRL 266
E QN+V W +M++ T+N EAI F M + D + L AC L ++
Sbjct: 126 TPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQM 185
Query: 267 VEAVHG--VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGY 324
E ++ + L ++T+ +LLN+Y K G + K+F E + D T+M+ GY
Sbjct: 186 GEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGY 245
Query: 325 AMHGCGTEAIQFFER--TIREGME----PDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV 378
A++G E+++ F++ TI + + P+ VTF +L ACSHSGLV+EGK +F+ M
Sbjct: 246 ALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMD 305
Query: 379 YGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKE 438
Y ++PR H+ CMVDL R G L DA E I MP +PN+ +W LLGA ++ N+ +G+E
Sbjct: 306 YNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEE 365
Query: 439 AAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIH 498
+ LD +Y+ LSNIY++ G+W + +K+R ++ + R PG S+IE G+ I+
Sbjct: 366 VQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKR---RMPGKSWIELGSIIN 422
Query: 499 RFVVDDYSHPDSD 511
FV S PD++
Sbjct: 423 EFV----SGPDNN 431
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 165/340 (48%), Gaps = 31/340 (9%)
Query: 50 TLLVALKSSSSLYCCRVIHARVIKSLDYRDGF-----IGDQLVSCYLNMGATPDAQLLFD 104
++L A+K SS+ + R I +L + GF I LV Y ++G A+ +FD
Sbjct: 66 SVLFAIKVSSAQKASS-LDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFD 124
Query: 105 EMPNK-DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAR 163
E P K + V W +++S +++ + + +F M+++ +EL+ + +SACA A
Sbjct: 125 ETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAE-KIELDGVIVTVALSACADLGAV 183
Query: 164 EEGQYVHCCAVK----LGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSM 219
+ G+ ++ ++K L M+L ++ N+L+NMY K G + A KLF +++ ++ SM
Sbjct: 184 QMGEEIYSRSIKRKRRLAMDLTLR--NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSM 241
Query: 220 VAVCTQNGRPNEAINYFSMMRL------NGLFPDEATMVSLLQACETLHLRRLVEAVHGV 273
+ NG+ E++ F M+ + P++ T + +L AC LVE
Sbjct: 242 IFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSH---SGLVEEGKRH 298
Query: 274 IFTCGLDENITIVTT----LLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHG 328
+ +D N+ +++L+ + G L + + ++ KP+ V +L ++HG
Sbjct: 299 FKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHG 358
Query: 329 CGTEAIQFFERTIREGMEPDHV-TFTHLLSACSHSGLVDE 367
E + +R I E ++ DHV + L + + G+ DE
Sbjct: 359 -NVELGEEVQRRIFE-LDRDHVGDYVALSNIYASKGMWDE 396
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 229/451 (50%), Gaps = 18/451 (3%)
Query: 46 PLVSTLLVALKSSSSLYCCRV---IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P TL L+ + + R+ IH IK+ + ++S Y G A
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKA 458
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F+ +P KD V++N+L G+++ GD V+ MK + + T + ++ CA
Sbjct: 459 FERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH-GVCPDSRTMVGMLQTCAFCSD 517
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSMVA 221
G V+ +K G + + V + LINM+ K + +A LF E++ VSWN M+
Sbjct: 518 YARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMN 577
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
+G+ EA+ F M++ P+ T V++++A L R+ +VH + CG
Sbjct: 578 GYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCS 637
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
+ +L+++Y+K G + +S K F EIS V+ MLS YA HG + A+ F
Sbjct: 638 QTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQ 697
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
++PD V+F +LSAC H+GLV+EGK F+ M + + ++ ++HY+CMVDLLG+ GL
Sbjct: 698 ENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLF 757
Query: 402 NDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIY 461
+A E+++ M + + GVWGALL +SR++ N+ + A L+ L+P +P +Y
Sbjct: 758 GEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY------- 810
Query: 462 SASGLWSDAAKVRALMKTKVLARNPGCSFIE 492
S ++ + + + P CS+IE
Sbjct: 811 ------SQDRRLGEVNNVSRIKKVPACSWIE 835
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 198/412 (48%), Gaps = 28/412 (6%)
Query: 18 ILHCLPTCCTLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDY 77
+ H + +CC V +S Y P VS L KS CR +H VIK
Sbjct: 188 LFHDMRSCC-------VDIDHVSLYNLIPAVSKLE---KSD----VCRCLHGLVIKK--- 230
Query: 78 RDGFI---GDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF 134
GFI L+ Y N A+ +F+E+ KD SW ++++ ++ G + +F
Sbjct: 231 --GFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF 288
Query: 135 SVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK 194
+M+ + D+ +N++ S + A A +G +H AV+ G+ V V +L++MY K
Sbjct: 289 DLMR-NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSK 347
Query: 195 FGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYF-SMMRLNGLFPDEATMVS 253
G ++ A +LF + ++++VSW++M+A Q G+ +EAI+ F MMR++ + P+ T+ S
Sbjct: 348 CGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH-IKPNAVTLTS 406
Query: 254 LLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPD 313
+LQ C + RL +++H ++ + T ++++Y+K GR + + K F + D
Sbjct: 407 VLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKD 466
Query: 314 KVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK-HYF 372
VA A+ GY G +A ++ G+ PD T +L C+ G Y
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 373 QVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
Q++ + + + H ++++ +C L A L FE ++ W ++
Sbjct: 527 QIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 181/381 (47%), Gaps = 14/381 (3%)
Query: 49 STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIG-DQLVSCYLNMGATPDAQLLFDEMP 107
+ LL+ L+ + C +H +I S G +QL++ Y ++++FD +
Sbjct: 6 TNLLLMLRECKNFRCLLQVHGSLIVS-----GLKPHNQLINAYSLFQRQDLSRVIFDSVR 60
Query: 108 NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQ 167
+ V WNS++ G+++ G + F M + ++ ++ +F + ACA + ++G
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 168 YVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNG 227
+H ++G+E V + L+ MY K + SA ++F M +++V+WN+MV+ QNG
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 228 RPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVT 287
+ A+ F MR + D ++ +L+ A L + +HG++ G +
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSS 238
Query: 288 TLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
L+++Y L A+ VF E+ + D+ + M++ YA +G E ++ F+ +
Sbjct: 239 GLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 298
Query: 348 DHVTFTHLLSACSHSGLVDEG--KHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
+ V L A ++ G + +G H + V + G + + ++ + +CG L A+
Sbjct: 299 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIG---DVSVATSLMSMYSKCGELEIAE 355
Query: 406 ELIKNMPFEPNSGVWGALLGA 426
+L N+ + + W A++ +
Sbjct: 356 QLFINIE-DRDVVSWSAMIAS 375
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 245/446 (54%), Gaps = 32/446 (7%)
Query: 47 LVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
+V +LL A ++ ++IH V+K D FI L+ Y G +A+ +F ++
Sbjct: 119 IVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDL 178
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 166
+D V +N+++SG++ +++ MK L ++ + +T+ ++IS + + E+
Sbjct: 179 GEQDLVVFNAMISGYANNSQADEALNLVKDMKL-LGIKPDVITWNALISGFSHMRNEEK- 236
Query: 167 QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
V+ ++ + G+ + ++VSW S+++ N
Sbjct: 237 ------------------VSEILELMCLDGY------------KPDVVSWTSIISGLVHN 266
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIV 286
+ +A + F M +GL+P+ AT+++LL AC TL + + +HG GL+++ +
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVR 326
Query: 287 TTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGME 346
+ LL++Y K G ++ + +F + K V +M+ YA HG +A++ F++ G +
Sbjct: 327 SALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEK 386
Query: 347 PDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKE 406
DH+TFT +L+ACSH+GL D G++ F +M + Y + PRL+HY+CMVDLLGR G L +A E
Sbjct: 387 LDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYE 446
Query: 407 LIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGL 466
+IK M EP+ VWGALL A R + N+ + + AA++L L+P + N ++L+++Y+ +G
Sbjct: 447 MIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGS 506
Query: 467 WSDAAKVRALMKTKVLARNPGCSFIE 492
W +++ ++K K R G S++E
Sbjct: 507 WESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 181/384 (47%), Gaps = 45/384 (11%)
Query: 32 TSVRFHSISTYPRDPLVSTLLVALKSSSSLYC-CRVIHARVIKSLDYRDGFIGDQLVSCY 90
+S R SI +Y L+ L+C RV+HA ++ S R I +LV+ Y
Sbjct: 9 SSFRLLSIGSYVE-------LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFY 61
Query: 91 LNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTF 150
+ G DA+ +FDEMP +D ++ ++ G + F M D L+L+
Sbjct: 62 VECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKD-GLKLDAFIV 120
Query: 151 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE 210
S++ A RE G+ +HC +K E +V++LI+MY KFG V +A K+F + E
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 211 QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAV 270
Q++V +N+M++ N + +EA+N M+L G+ PD T +L+ H+R
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFS--HMRN----- 233
Query: 271 HGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCG 330
+E ++ + L+ L + KPD V+ T+++SG +
Sbjct: 234 ---------EEKVSEILELMCL---------------DGYKPDVVSWTSIISGLVHNFQN 269
Query: 331 TEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHY 388
+A F++ + G+ P+ T LL AC+ + GK H + V V G++
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV---VTGLEDHGFVR 326
Query: 389 SCMVDLLGRCGLLNDAKELIKNMP 412
S ++D+ G+CG +++A L + P
Sbjct: 327 SALLDMYGKCGFISEAMILFRKTP 350
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 140/293 (47%), Gaps = 4/293 (1%)
Query: 149 TFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM 208
+++ +I A + G+ +H V G+ ++ L+ Y + G V A K+F M
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 209 TEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVE 268
++++ M+ C +NG E++++F M +GL D + SLL+A L R +
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGK 137
Query: 269 AVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHG 328
+H ++ + + IV++L+++YSK G + + KVF+++ + D V AM+SGYA +
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNS 197
Query: 329 CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY 388
EA+ + G++PD +T+ L+S SH ++ ++M + G +P + +
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC-LDGYKPDVVSW 256
Query: 389 SCMVDLLGRCGLLNDAKELIKNM---PFEPNSGVWGALLGASRVYHNISIGKE 438
+ ++ L A + K M PNS LL A + GKE
Sbjct: 257 TSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKE 309
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 236/458 (51%), Gaps = 34/458 (7%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
IHA +++ + + +S ++ + A +F + N + + +N+++ +S G
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGP 82
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGM-------- 178
+S FS MKS + +E T+ ++ +C+ G+ VH ++ G
Sbjct: 83 PLESLSFFSSMKSR-GIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRI 141
Query: 179 -----------------------ELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVS 215
E V V N +I + G V+ LF M+E+++VS
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS 201
Query: 216 WNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
WNSM++ ++ GR EA+ F M G PDEAT+V++L +L + + +H
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 276 TCGLDEN-ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAI 334
+ GL ++ IT+ L++ Y K G L A+ +F ++ + + V+ ++SG A++G G I
Sbjct: 262 SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGI 321
Query: 335 QFFERTIREG-MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVD 393
F+ I EG + P+ TF +L+ CS++G V+ G+ F +M + + ++ R +HY MVD
Sbjct: 322 DLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVD 381
Query: 394 LLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRN 453
L+ R G + +A + +KNMP N+ +WG+LL A R + ++ + + AA L+ ++P + N
Sbjct: 382 LMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGN 441
Query: 454 YIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFI 491
Y++LSN+Y+ G W D KVR LMK L ++ G S I
Sbjct: 442 YVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 138/314 (43%), Gaps = 34/314 (10%)
Query: 49 STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPN 108
+ LL + S S L + +H +I++ +R G I +V Y + G DAQ +FDEM
Sbjct: 106 APLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSE 165
Query: 109 KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS----------------------------- 139
++ V WN ++ GF GD+ + +F M
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 140 -DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQ-VKVVNTLINMYGKFGF 197
D + +E T ++V+ A + G+++H A G+ + V N L++ Y K G
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD 285
Query: 198 VDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG-LFPDEATMVSLLQ 256
+++A +F M +N+VSWN++++ NG+ I+ F M G + P+EAT + +L
Sbjct: 286 LEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLA 345
Query: 257 ACE-TLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDK 314
C T + R E ++ L+ +++L S+ GR+ + K + +
Sbjct: 346 CCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANA 405
Query: 315 VACTAMLSGYAMHG 328
++LS HG
Sbjct: 406 AMWGSLLSACRSHG 419
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 218/422 (51%), Gaps = 41/422 (9%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R IH IKS D F+ + LV+ Y G A+ + D MP +D VSWNSL+S + ++
Sbjct: 160 RQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEK 219
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G + ++F M+ E V+
Sbjct: 220 GLVDEARALFDEME----------------------------------------ERNVES 239
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFS-MMRLNG 243
N +I+ Y G V A ++F +M +++VSWN+MV G NE + F+ M+ +
Sbjct: 240 WNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDST 299
Query: 244 LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
PD T+VS+L AC +L E VH I G++ + T L+++YSK G+++ +
Sbjct: 300 EKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKAL 359
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
+VF SK D +++S ++HG G +A++ F + EG +P+ +TF +LSAC+H G
Sbjct: 360 EVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVG 419
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGAL 423
++D+ + F++MS VY V+P ++HY CMVDLLGR G + +A+EL+ +P + S + +L
Sbjct: 420 MLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESL 479
Query: 424 LGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLA 483
LGA + + + + A L+ L+ D Y +SN+Y++ G W R M+ + +
Sbjct: 480 LGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVN 539
Query: 484 RN 485
R+
Sbjct: 540 RS 541
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 188/419 (44%), Gaps = 55/419 (13%)
Query: 28 LLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLV 87
LL + +++ S+ + P++S + + SL + HA ++K+ + D F +LV
Sbjct: 23 LLQKENLKKMSVCSSTPVPILSFT----ERAKSLTEIQQAHAFMLKTGLFHDTFSASKLV 78
Query: 88 SCYLNMGATPD----AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL 143
+ + P A + + + + + + NS++ ++ ++VF M
Sbjct: 79 A-FAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVF 137
Query: 144 ELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFK 203
++ +F V+ ACA EEG+ +H +K G+ V V NTL+N+YG+ G+ + A K
Sbjct: 138 P-DKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARK 196
Query: 204 LFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHL 263
+ M ++ VSWNS+++ + G +EA F M
Sbjct: 197 VLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME----------------------- 233
Query: 264 RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSG 323
+ N+ +++ Y+ G + + +VF + D V+ AM++
Sbjct: 234 ----------------ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTA 277
Query: 324 YAMHGCGTEAIQFFERTIREGME-PDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQ 382
YA GC E ++ F + + + E PD T +LSAC+ G + +G+ + V D +G++
Sbjct: 278 YAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE-WVHVYIDKHGIE 336
Query: 383 PRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAE 441
+ +VD+ +CG ++ A E+ + + + W +++ V+ +GK+A E
Sbjct: 337 IEGFLATALVDMYSKCGKIDKALEVFRATS-KRDVSTWNSIISDLSVH---GLGKDALE 391
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 236/445 (53%), Gaps = 9/445 (2%)
Query: 55 LKSSSSLYCCR---VIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDF 111
LKS L C + IH V K + + L+S Y G +A+L FD M +D
Sbjct: 120 LKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDL 179
Query: 112 VSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHC 171
VSWN+++ G++ S+F +M ++ + + TF S++ A + K E +H
Sbjct: 180 VSWNAMIDGYTANACADTSFSLFQLMLTE-GKKPDCFTFGSLLRASIVVKCLEIVSELHG 238
Query: 172 CAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV-AVCTQNGRPN 230
A+KLG ++ +L+N Y K G + +A+KL +++++S +++ QN +
Sbjct: 239 LAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTS 298
Query: 231 EAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG-VIFTCGLDENITIVTTL 289
+A + F M DE + S+L+ C T+ + +HG + + + ++ + +L
Sbjct: 299 DAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSL 358
Query: 290 LNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDH 349
+++Y+K G + + F E+ + D + T++++GY HG +AI + R E ++P+
Sbjct: 359 IDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPND 418
Query: 350 VTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIK 409
VTF LLSACSH+G + G + M + +G++ R +H SC++D+L R G L +A LI+
Sbjct: 419 VTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR 478
Query: 410 NMP--FEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLW 467
+ +S WGA L A R + N+ + K AA L++++P P NYI L+++Y+A+G W
Sbjct: 479 SKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAW 538
Query: 468 SDAAKVRALMK-TKVLARNPGCSFI 491
+A R LMK + + PG S +
Sbjct: 539 DNALNTRKLMKESGSCNKAPGYSLV 563
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 173/350 (49%), Gaps = 11/350 (3%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
+ D L+ YL G A+ LFD + +D VSW +++S FS+ G + + +F M +
Sbjct: 49 LKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRE- 107
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
D++ N+ T+ SV+ +C +EG +H K + V + L+++Y + G ++ A
Sbjct: 108 DVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEA 167
Query: 202 FKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL 261
F +M E+++VSWN+M+ T N + + + F +M G PD T SLL+A +
Sbjct: 168 RLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVV 227
Query: 262 HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAML 321
+V +HG+ G + ++ +L+N Y K G L + K+ K D ++CTA++
Sbjct: 228 KCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALI 287
Query: 322 SGYAMH-GCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK--HYFQVMSDV 378
+G++ C ++A F+ IR + D V + +L C+ V G+ H F + S
Sbjct: 288 TGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSS- 346
Query: 379 YGVQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
Q R D + ++D+ + G + DA + M E + W +L+
Sbjct: 347 ---QIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAG 392
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 109/209 (52%)
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
++ + C+ +++ +H ++ G +++ + LI++Y K G V A KLF ++
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS 74
Query: 210 EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA 269
++++VSW +M++ ++ G +A+ F M + ++ T S+L++C+ L +
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 270 VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC 329
+HG + N+ + + LL+LY++ G++ + F + + D V+ AM+ GY + C
Sbjct: 135 IHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
Query: 330 GTEAIQFFERTIREGMEPDHVTFTHLLSA 358
+ F+ + EG +PD TF LL A
Sbjct: 195 ADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 147/522 (28%), Positives = 248/522 (47%), Gaps = 61/522 (11%)
Query: 11 TLTLSPRILHCLPTCCTLLSET-SVRFH-SISTYPRDPLVSTLLVALKSSSSLYCC---- 64
T+T + ILH LP + S + RF S+S Y R S + C
Sbjct: 139 TITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALL 198
Query: 65 -----RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVS 119
RV+H + S + ++ + L+S Y G A+ LFD M +D VSWN++++
Sbjct: 199 DFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIIN 258
Query: 120 GFSKRGDLGNCMSVFSVM----------------------------------KSDLDLEL 145
++ LG + M + ++ +
Sbjct: 259 CYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRI 318
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVK---LGMELQVKVVNTLINMYGKFGFVDSAF 202
+ I+ + AC+ A + G+ HC ++ ++ V N+LI MY + + AF
Sbjct: 319 GSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAF 377
Query: 203 KLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLH 262
+F + ++ +WNS+++ N R E M L+G P+ T+ S+L
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL----- 432
Query: 263 LRRLVEAVHGVIFTC------GLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVA 316
R+ HG F C + + + +L+++Y+K G + A+ +VF + K DKV
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVT 492
Query: 317 CTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS 376
T+++ GY G G A+ +F+ R G++PDHVT +LSACSHS LV EG F M
Sbjct: 493 YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Query: 377 DVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIG 436
V+G++ RL+HYSCMVDL R G L+ A+++ +P+EP+S + LL A ++ N +IG
Sbjct: 553 HVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIG 612
Query: 437 KEAAEN-LIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALM 477
+ AA+ L+ P +Y++L+++Y+ +G WS V+ L+
Sbjct: 613 EWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLL 654
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 157/382 (41%), Gaps = 38/382 (9%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+HA I S D + +LV+ Y +AQ + + + WN L+ + +
Sbjct: 105 LHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKR 164
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+SV+ M S + +E T+ SVI ACA G+ VH + V N
Sbjct: 165 FQESVSVYKRMMSK-GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
LI+MY +FG VD A +LF M+E++ VSWN+++ T + EA M L+G+
Sbjct: 224 ALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEA 283
Query: 247 DEAT-----------------------------------MVSLLQACETLHLRRLVEAVH 271
T M++ L+AC + + + H
Sbjct: 284 SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFH 343
Query: 272 G-VIFTCGLDENI-TIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC 329
VI +C +I + +L+ +YS+ L + VF ++ +++SG+A +
Sbjct: 344 CLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNER 403
Query: 330 GTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS 389
E + + G P+H+T +L + G + GK + + + L ++
Sbjct: 404 SEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWN 463
Query: 390 CMVDLLGRCGLLNDAKELIKNM 411
+VD+ + G + AK + +M
Sbjct: 464 SLVDMYAKSGEIIAAKRVFDSM 485
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%)
Query: 152 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
S++S C GQ +H + G+E +V L+ Y F +D A +
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVH 271
+ + WN ++ +N R E+++ + M G+ DE T S+++AC L VH
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 272 GVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGT 331
G I N+ + L+++Y + G+++ + ++F +S+ D V+ A+++ Y
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 332 EAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
EA + +R G+E VT+ + C +G
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 147/522 (28%), Positives = 248/522 (47%), Gaps = 61/522 (11%)
Query: 11 TLTLSPRILHCLPTCCTLLSET-SVRFH-SISTYPRDPLVSTLLVALKSSSSLYCC---- 64
T+T + ILH LP + S + RF S+S Y R S + C
Sbjct: 139 TITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALL 198
Query: 65 -----RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVS 119
RV+H + S + ++ + L+S Y G A+ LFD M +D VSWN++++
Sbjct: 199 DFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIIN 258
Query: 120 GFSKRGDLGNCMSVFSVM----------------------------------KSDLDLEL 145
++ LG + M + ++ +
Sbjct: 259 CYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRI 318
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVK---LGMELQVKVVNTLINMYGKFGFVDSAF 202
+ I+ + AC+ A + G+ HC ++ ++ V N+LI MY + + AF
Sbjct: 319 GSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAF 377
Query: 203 KLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLH 262
+F + ++ +WNS+++ N R E M L+G P+ T+ S+L
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL----- 432
Query: 263 LRRLVEAVHGVIFTC------GLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVA 316
R+ HG F C + + + +L+++Y+K G + A+ +VF + K DKV
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVT 492
Query: 317 CTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS 376
T+++ GY G G A+ +F+ R G++PDHVT +LSACSHS LV EG F M
Sbjct: 493 YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Query: 377 DVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIG 436
V+G++ RL+HYSCMVDL R G L+ A+++ +P+EP+S + LL A ++ N +IG
Sbjct: 553 HVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIG 612
Query: 437 KEAAEN-LIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALM 477
+ AA+ L+ P +Y++L+++Y+ +G WS V+ L+
Sbjct: 613 EWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLL 654
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 157/382 (41%), Gaps = 38/382 (9%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+HA I S D + +LV+ Y +AQ + + + WN L+ + +
Sbjct: 105 LHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKR 164
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
+SV+ M S + +E T+ SVI ACA G+ VH + V N
Sbjct: 165 FQESVSVYKRMMSK-GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
LI+MY +FG VD A +LF M+E++ VSWN+++ T + EA M L+G+
Sbjct: 224 ALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEA 283
Query: 247 DEAT-----------------------------------MVSLLQACETLHLRRLVEAVH 271
T M++ L+AC + + + H
Sbjct: 284 SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFH 343
Query: 272 G-VIFTCGLDENI-TIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGC 329
VI +C +I + +L+ +YS+ L + VF ++ +++SG+A +
Sbjct: 344 CLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNER 403
Query: 330 GTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS 389
E + + G P+H+T +L + G + GK + + + L ++
Sbjct: 404 SEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWN 463
Query: 390 CMVDLLGRCGLLNDAKELIKNM 411
+VD+ + G + AK + +M
Sbjct: 464 SLVDMYAKSGEIIAAKRVFDSM 485
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%)
Query: 152 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
S++S C GQ +H + G+E +V L+ Y F +D A +
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVH 271
+ + WN ++ +N R E+++ + M G+ DE T S+++AC L VH
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 272 GVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGT 331
G I N+ + L+++Y + G+++ + ++F +S+ D V+ A+++ Y
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 332 EAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
EA + +R G+E VT+ + C +G
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 242/498 (48%), Gaps = 65/498 (13%)
Query: 48 VSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP 107
++T++ A ++ CR++ + IK F+ L+ Y DA+ LFDEMP
Sbjct: 176 LATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 108 NKDFVSWNSLVSGFSKRGDLGNCMSVFS-----------------VMKSDLDLEL----- 145
++ V+WN +++G+SK G + +F + K+ LD L
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 146 --------NELTFISVISACALAKAREEGQYVHCCAVKLGME----LQVKVV-------- 185
+E+ + ++SA A + +G +H VK G + LQ ++
Sbjct: 296 MLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 355
Query: 186 -------------------NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
N LI + K G V+ A ++F ++++ SWN+M++ Q+
Sbjct: 356 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQS 415
Query: 227 GRPNEAINYF-SMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
P A++ F M+ + + PD TMVS+ A +L + H + + N +
Sbjct: 416 LSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNL 475
Query: 286 VTTLLNLYSKIGRLNASCKVFAE---ISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
++++Y+K G + + +F + IS A++ G A HG A+ +
Sbjct: 476 TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQS 535
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLN 402
++P+ +TF +LSAC H+GLV+ GK YF+ M +G++P + HY CMVDLLG+ G L
Sbjct: 536 LPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLE 595
Query: 403 DAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYS 462
+AKE+IK MP + + +WG LL ASR + N+ I + AA L A+DPS +MLSN+Y+
Sbjct: 596 EAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYA 655
Query: 463 ASGLWSDAAKVRALMKTK 480
+G W D A VR M+T+
Sbjct: 656 DAGRWEDVALVREEMRTR 673
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/535 (23%), Positives = 219/535 (40%), Gaps = 101/535 (18%)
Query: 25 CCTLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGD 84
C + S T F S+ LVS L + SS+ + C R IH RV+KS +G+I +
Sbjct: 22 CFSAPSRTHFDFSGESSDTERALVSAL-GSCASSNDVTCGRQIHCRVLKSGLDSNGYICN 80
Query: 85 QLVSCYLNMGATPDAQ-------------------------------LLFDEMPNKDFVS 113
+++ Y DA+ LFD MP + VS
Sbjct: 81 SVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVS 140
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCA 173
+ +L+ G+++ M +F M+ +L + LNE+T +VISAC+ + + + A
Sbjct: 141 YTTLIKGYAQNNQWSEAMELFREMR-NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 174 VKLGMELQVKVV-------------------------------NTLINMYGKFGFVDSAF 202
+KL +E +V V N ++N Y K G ++ A
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAE 259
Query: 203 KLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLH 262
+LF +TE+++VSW +M+ C + + +EA+ Y++ M G+ P E MV LL A
Sbjct: 260 ELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSV 319
Query: 263 LRRLVEAVHGVIFTCGLDENITIVTTLLNLYS---------------------------- 294
+HG I G D + T+++ Y+
Sbjct: 320 GSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIA 379
Query: 295 ---KIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG-MEPDHV 350
K G + + +VF + D + AM+SGYA A+ F I ++PD +
Sbjct: 380 GFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAI 439
Query: 351 TFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKN 410
T + SA S G ++EGK + + + P + + ++D+ +CG + A +
Sbjct: 440 TMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQ 498
Query: 411 MPFEPNSGV--WGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSA 463
+S + W A++ S + + + + +L +L P P N I + SA
Sbjct: 499 TKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSL-PIKP-NSITFVGVLSA 551
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 218/441 (49%), Gaps = 13/441 (2%)
Query: 55 LKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP---NKDF 111
L L+CC V+KS F L+ Y N G+ A +F + N
Sbjct: 254 LTMGKQLHCC------VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 112 VSWNSLVSGF-SKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVH 170
WNS++SGF + + + +SDL + T + C G VH
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFD--SYTLSGALKICINYVNLRLGLQVH 365
Query: 171 CCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPN 230
V G EL V + L++++ G + A KLF + +++++++ ++ C ++G +
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNS 425
Query: 231 EAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLL 290
A F + GL D+ + ++L+ C +L + +HG+ G + T L+
Sbjct: 426 LAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALV 485
Query: 291 NLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHV 350
++Y K G ++ +F + + D V+ T ++ G+ +G EA ++F + I G+EP+ V
Sbjct: 486 DMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKV 545
Query: 351 TFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKN 410
TF LLSAC HSGL++E + + M YG++P L+HY C+VDLLG+ GL +A ELI
Sbjct: 546 TFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINK 605
Query: 411 MPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDA 470
MP EP+ +W +LL A + N + AE L+ P DP Y LSN Y+ G+W
Sbjct: 606 MPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQL 665
Query: 471 AKVRALMKTKVLARNPGCSFI 491
+KVR K K+ A+ G S+I
Sbjct: 666 SKVREAAK-KLGAKESGMSWI 685
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 170/385 (44%), Gaps = 46/385 (11%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
I A VIK ++ FI + ++S Y++ DA +FDEM ++ V+W ++VSG++ G
Sbjct: 27 IQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGK 86
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGME-LQVKVV 185
+ ++ M + NE + +V+ AC L + G V+ ++G E L+ VV
Sbjct: 87 PNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY---ERIGKENLRGDVV 143
Query: 186 ---------------------------------NTLINMYGKFGFVDSAFKLFWAMTEQN 212
NTLI+ Y K G +D A LF M + N
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN 203
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
+VSWN +++ G P A+ + M+ GL D + L+AC L + + +H
Sbjct: 204 VVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHC 262
Query: 273 VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAE--ISKPDKVAC-TAMLSGYAMHGC 329
+ GL+ + ++ L+++YS G L + VF + ++ VA +MLSG+ ++
Sbjct: 263 CVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEE 322
Query: 330 GTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY- 388
A+ + + + D T + L C + + G QV S V LD+
Sbjct: 323 NEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLG---LQVHSLVVVSGYELDYIV 379
Query: 389 -SCMVDLLGRCGLLNDAKELIKNMP 412
S +VDL G + DA +L +P
Sbjct: 380 GSILVDLHANVGNIQDAHKLFHRLP 404
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 163/370 (44%), Gaps = 20/370 (5%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL 143
+ L+S Y G +A LF MP + VSWN L+SGF +G + M+ + L
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQRE-GL 234
Query: 144 ELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFK 203
L+ + AC+ G+ +HCC VK G+E ++ LI+MY G + A
Sbjct: 235 VLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAAD 294
Query: 204 LFWA---MTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACET 260
+F ++ WNSM++ N A+ + + L D T+ L+ C
Sbjct: 295 VFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICIN 354
Query: 261 LHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAM 320
RL VH ++ G + + + + L++L++ +G + + K+F + D +A + +
Sbjct: 355 YVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGL 414
Query: 321 LSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQV-MSDVY 379
+ G G + A F I+ G++ D +++L CS + GK + + Y
Sbjct: 415 IRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGY 474
Query: 380 GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVW-GALLG---------ASRV 429
+P + +VD+ +CG +++ L M E + W G ++G A R
Sbjct: 475 ESEPVTA--TALVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEAFRY 531
Query: 430 YHN-ISIGKE 438
+H I+IG E
Sbjct: 532 FHKMINIGIE 541
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 136/303 (44%), Gaps = 38/303 (12%)
Query: 157 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSW 216
C +A + G+ + +K G+ V + N +I+MY F + A K+F M+E+N+V+W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 217 NSMVAVCTQNGRPNEAIN-YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIF 275
+MV+ T +G+PN+AI Y M+ +E ++L+AC + +L V+ I
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 276 TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAI- 334
L ++ ++ +++++Y K GRL + F EI +P + ++SGY G EA+
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 335 -----------------------------QFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
+F R REG+ D L ACS GL+
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 366 DEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNS--GVWG 421
GK H V S G++ S ++D+ CG L A ++ NS VW
Sbjct: 255 TMGKQLHCCVVKS---GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWN 311
Query: 422 ALL 424
++L
Sbjct: 312 SML 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 35/259 (13%)
Query: 47 LVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM 106
+VS +L S +SL + IH IK + LV Y+ G + +LFD M
Sbjct: 445 IVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM 504
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 166
+D VSW ++ GF + G + F M ++ +E N++TF+ ++SAC + EE
Sbjct: 505 LERDVVSWTGIIVGFGQNGRVEEAFRYFHKM-INIGIEPNKVTFLGLLSACRHSGLLEEA 563
Query: 167 QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
+ +TL M ++G E + + +V + Q
Sbjct: 564 R------------------STLETMKSEYGL------------EPYLEHYYCVVDLLGQA 593
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIV 286
G EA + M L PD+ SLL AC T LV + + G ++ ++
Sbjct: 594 GLFQEANELINKMPLE---PDKTIWTSLLTACGTHKNAGLVTVIAEKLLK-GFPDDPSVY 649
Query: 287 TTLLNLYSKIGRLNASCKV 305
T+L N Y+ +G + KV
Sbjct: 650 TSLSNAYATLGMWDQLSKV 668
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 255 LQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDK 314
L+ C + + E++ + G+ +N+ I ++++Y L+ + KVF E+S+ +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 315 VACTAMLSGYAMHGCGTEAIQFFERTI-REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQ 373
V T M+SGY G +AI+ + R + E + ++ +L AC G + G ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 374 VMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+ ++ + + +VD+ + G L +A K + P+S W L+
Sbjct: 132 RIGK-ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLI 180
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 249/473 (52%), Gaps = 22/473 (4%)
Query: 55 LKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPD----AQLLFD--EMPN 108
+KS+ SL+ +H R+ + +L++ +L++ A +FD E+PN
Sbjct: 27 IKSTHSLFIIHGLH---------RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPN 77
Query: 109 KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQY 168
+ S + LG + V + + D+ + LTF +I AC A G+
Sbjct: 78 SFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQ 137
Query: 169 VHCCAVKLGMELQVKVVNT-LINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNG 227
+HC VK G+ L V T ++ +Y + + A K+F + + ++V W+ ++ + G
Sbjct: 138 IHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 228 RPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT-CGLDENITIV 286
+E + F M + GL PDE ++ + L AC + + +H + ++ ++ +
Sbjct: 198 LGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVG 257
Query: 287 TTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE-GM 345
T L+++Y+K G + + +VF ++++ + + A++ GYA +G +A+ ER RE G+
Sbjct: 258 TALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGI 317
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
+PD V +L+AC+H G ++EG+ + M Y + P+ +HYSC+VDL+ R G L+DA
Sbjct: 318 KPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 406 ELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRN----YIMLSNIY 461
LI+ MP +P + VWGALL R + N+ +G+ A +NL+ L+ + + LSNIY
Sbjct: 378 NLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIY 437
Query: 462 SASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIH 514
+ +A+KVR +++ + + + PG S +E + +FV D SHP+ +IH
Sbjct: 438 FSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIH 490
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 231/434 (53%), Gaps = 11/434 (2%)
Query: 65 RVIHARVIKS-LDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSK 123
+ +H+ V+KS + + F+ + LV Y G + F+ +P KD +SWNS+VS +
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 124 RGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQ-V 182
G + + + +FS M+ + F+S ++ C+ + G+ +HC +K+G ++ +
Sbjct: 293 YGSVLDSLDLFSKMQF-WGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSL 351
Query: 183 KVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLN 242
V + LI+MYGK ++++ L+ ++ N+ NS++ G + I F +M
Sbjct: 352 HVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDE 411
Query: 243 GLFPDEATMVSLLQAC-----ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG 297
G DE T+ ++L+A E+LH LV H G ++ + +L++ Y+K G
Sbjct: 412 GTGIDEVTLSTVLKALSLSLPESLHSCTLV---HCCAIKSGYAADVAVSCSLIDAYTKSG 468
Query: 298 RLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLS 357
+ S KVF E+ P+ T++++GYA +G GT+ ++ R + PD VT +LS
Sbjct: 469 QNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLS 528
Query: 358 ACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNS 417
CSHSGLV+EG+ F + YG+ P Y+CMVDLLGR GL+ A+ L+ + +
Sbjct: 529 GCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADC 588
Query: 418 GVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALM 477
W +LL + R++ N +IG+ AAE L+ L+P + YI +S Y G + + ++R +
Sbjct: 589 VAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIA 648
Query: 478 KTKVLARNPGCSFI 491
++ L R G S +
Sbjct: 649 ASRELMREIGYSSV 662
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 4/321 (1%)
Query: 94 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
G A FDEM +D V++N L+SG S+ G + +++ M S L + TF SV
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS-CGLRESASTFPSV 118
Query: 154 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM 213
+S C+ EG VHC + LG + V + L+ +Y VD A KLF M ++N+
Sbjct: 119 LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 214 VSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGV 273
N ++ Q G + M L G+ + T +++ C L + +H +
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 274 IFTCGLD-ENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTE 332
+ G + NI + L++ YS G L+ S + F + + D ++ +++S A +G +
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLD 298
Query: 333 AIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKH-YFQVMSDVYGVQPRLDHYSCM 391
++ F + G P F L+ CS + + GK + V+ + V L S +
Sbjct: 299 SLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS-LHVQSAL 357
Query: 392 VDLLGRCGLLNDAKELIKNMP 412
+D+ G+C + ++ L +++P
Sbjct: 358 IDMYGKCNGIENSALLYQSLP 378
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 17/209 (8%)
Query: 48 VSTLLVALKSS--SSLYCCRVIHARVIKSLDYRDGFIGDQLVSC-----YLNMGATPDAQ 100
+ST+L AL S SL+ C ++H IKS G+ D VSC Y G ++
Sbjct: 420 LSTVLKALSLSLPESLHSCTLVHCCAIKS-----GYAADVAVSCSLIDAYTKSGQNEVSR 474
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
+FDE+ + S+++G+++ G +C+ + M ++L +E+T +SV+S C+ +
Sbjct: 475 KVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDR-MNLIPDEVTILSVLSGCSHS 533
Query: 161 KAREEGQYV-HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFW-AMTEQNMVSWNS 218
EEG+ + K G+ K+ ++++ G+ G V+ A +L A + + V+W+S
Sbjct: 534 GLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSS 593
Query: 219 MVAVCTQNGRPNEAINYFSMMRLNGLFPD 247
++ C + NE I + L L P+
Sbjct: 594 LLQSCRIH--RNETIGRRAAEVLMNLEPE 620
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 249/473 (52%), Gaps = 22/473 (4%)
Query: 55 LKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPD----AQLLFD--EMPN 108
+KS+ SL+ +H R+ + +L++ +L++ A +FD E+PN
Sbjct: 27 IKSTHSLFIIHGLH---------RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPN 77
Query: 109 KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQY 168
+ S + LG + V + + D+ + LTF +I AC A G+
Sbjct: 78 SFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQ 137
Query: 169 VHCCAVKLGMELQVKVVNT-LINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNG 227
+HC VK G+ L V T ++ +Y + + A K+F + + ++V W+ ++ + G
Sbjct: 138 IHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 228 RPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC-GLDENITIV 286
+E + F M + G+ PDE ++ + L AC + + +H + ++ ++ +
Sbjct: 198 LGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVG 257
Query: 287 TTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE-GM 345
T L+++Y+K G + + +VF ++++ + + A++ GYA +G +A +R RE G+
Sbjct: 258 TALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGI 317
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
+PD V +L+AC+H G ++EG+ + M YG+ P+ +HYSC+VDL+ R G L+DA
Sbjct: 318 KPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 406 ELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRN----YIMLSNIY 461
+LI+ MP +P + VWGALL R + N+ +G+ A +NL+ L+ + + LSNIY
Sbjct: 378 DLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIY 437
Query: 462 SASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIH 514
+ +A KVR +++ + + + PG S +E + +FV D SHP+ +IH
Sbjct: 438 FSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIH 490
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 202/402 (50%), Gaps = 16/402 (3%)
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLD 280
A C ++G+ +A+ ++ D + ++ L + C + + VHG I
Sbjct: 228 AFC-KHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSH 286
Query: 281 ENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERT 340
+++ LL +YS G N + VF ++S+ + ++ +A +G G +AI F R
Sbjct: 287 LDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRF 346
Query: 341 IREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGL 400
EG PD F + AC G VDEG +F+ MS YG+ P ++ Y +V++ G
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 401 LNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNI 460
L++A E ++ MP EPN VW L+ SRV+ N+ +G AE + LDP+ N
Sbjct: 407 LDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRL-------NK 459
Query: 461 YSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNK--IHRFVVDDYSHPDSDKIHKKLE 518
S G K + K + R S I HG K + F D + P++D++ + L
Sbjct: 460 QSREGFI--PVKASDVEKESLKKR----SGILHGVKSSMQEFRAGDTNLPENDELFQLLR 513
Query: 519 EVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLR 578
+ + E G+V+ET LHD+ +E K ++ HSE+IA A +L SA P +IKNLR
Sbjct: 514 NLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLR 573
Query: 579 ICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+C DCH K +S I R +I RD KRFH +G C+C DYW
Sbjct: 574 VCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 28/256 (10%)
Query: 58 SSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSL 117
+ L + +H ++ S+ + D L+ Y N G +A +F++M K+ +W +
Sbjct: 267 AEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCII 326
Query: 118 VSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG-QYVHCCAVKL 176
+ F+K G + + +FS K + ++ +L F + AC + +EG + +
Sbjct: 327 IRCFAKNGFGEDAIDMFSRFKEEGNIPDGQL-FRGIFYACGMLGDVDEGLLHFESMSRDY 385
Query: 177 GMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSMVAVCTQNGRPN----- 230
G+ ++ +L+ MY GF+D A + M E N+ W +++ + +G
Sbjct: 386 GIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYC 445
Query: 231 -EAINYFSMMRLN-----GLFPDEATMVSLLQACETLHLRRLVEAVHGVI-----FTCG- 278
E + + RLN G P +A+ V E L++ +HGV F G
Sbjct: 446 AEVVEFLDPTRLNKQSREGFIPVKASDV------EKESLKKRSGILHGVKSSMQEFRAGD 499
Query: 279 --LDENITIVTTLLNL 292
L EN + L NL
Sbjct: 500 TNLPENDELFQLLRNL 515
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 108/262 (41%), Gaps = 46/262 (17%)
Query: 120 GFSKRGDLGNCMSVFSVMKS-DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGM 178
F K G + + ++ S + ++L+ L ++ I C A+ +E + VH
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKI--CGEAEGLQEAKTVHGKISASVS 285
Query: 179 ELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSM 238
L + + L+ MY G + A +F M+E+N+ +W ++ +NG +AI+ FS
Sbjct: 286 HLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSR 345
Query: 239 MRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR 298
+ G PD + G+ + CG+ +G
Sbjct: 346 FKEEGNIPDG-------------------QLFRGIFYACGM----------------LGD 370
Query: 299 LNASCKVFAEISKPDKVACT-----AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFT 353
++ F +S+ +A + +++ YA+ G EA++F ER MEP+ +
Sbjct: 371 VDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERM---PMEPNVDVWE 427
Query: 354 HLLSACSHSGLVDEGKHYFQVM 375
L++ G ++ G + +V+
Sbjct: 428 TLMNLSRVHGNLELGDYCAEVV 449
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/548 (25%), Positives = 254/548 (46%), Gaps = 74/548 (13%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P VST L A + + + HA I + D +G L++ Y +G A+++
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMV 331
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD M KD V+WN ++SG+ ++G + + + + +M+ + L+ + +T +++SA A +
Sbjct: 332 FDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE-KLKYDCVTLATLMSAAARTEN 390
Query: 163 REEGQYVHCCAVKLGMELQVKVV-------------------------------NTLINM 191
+ G+ V C ++ E + + NTL+
Sbjct: 391 LKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAA 450
Query: 192 YGKFGFVDSAFKLFWAMTEQ---------------------------------------N 212
Y + G A +LF+ M + N
Sbjct: 451 YAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPN 510
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
++SW +M+ QNG EAI + M+ +GL P+ ++ L AC L + +HG
Sbjct: 511 LISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHG 570
Query: 273 -VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGT 331
+I ++I T+L+++Y+K G +N + KVF + AM+S YA++G
Sbjct: 571 YIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLK 630
Query: 332 EAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCM 391
EAI + G++PD++T T++LSAC+H+G +++ F + ++P L+HY M
Sbjct: 631 EAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLM 690
Query: 392 VDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDP 451
VDLL G A LI+ MPF+P++ + +L+ + + + L+ +P +
Sbjct: 691 VDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENS 750
Query: 452 RNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNK--IHRFVVDDYSHPD 509
NY+ +SN Y+ G W + K+R +MK K L + PGCS+I+ + +H FV +D +H
Sbjct: 751 GNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTR 810
Query: 510 SDKIHKKL 517
++I L
Sbjct: 811 INEIQMML 818
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 136/518 (26%), Positives = 238/518 (45%), Gaps = 37/518 (7%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R +H V+KS F+ L Y G DA +FDE+P+++ V+WN+L+ G+ +
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G + +FS M+ +E +T + +SA A EEG+ H A+ GMEL +
Sbjct: 253 GKNEEAIRLFSDMRKQ-GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL 311
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
+L+N Y K G ++ A +F M E+++V+WN +++ Q G +AI +MRL L
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKL 371
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
D T+ +L+ A +L + V + +I + +T++++Y+K G + + K
Sbjct: 372 KYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKK 431
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
VF + D + +L+ YA G EA++ F EG+ P+ +T+ ++ + +G
Sbjct: 432 VFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ 491
Query: 365 VDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP---FEPNSGVWG 421
VDE K F M G+ P L ++ M++ + + G +A ++ M PN+
Sbjct: 492 VDEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550
Query: 422 ALLGA---------SRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSA-----SGLW 467
L A R H I +L++++ S Y +I A S L+
Sbjct: 551 VALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLY 610
Query: 468 SDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEF 527
S+ A++ L N ++ ++R + PD+ I V+S
Sbjct: 611 SELPLSNAMISAYALYGN-----LKEAIALYRSLEGVGLKPDNITITN----VLSACNHA 661
Query: 528 GFVSETESILHDVAEEIKTNMVNKHSEKIALA-YGLLV 564
G +++ A EI T++V+K S K L YGL+V
Sbjct: 662 GDINQ--------AIEIFTDIVSKRSMKPCLEHYGLMV 691
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 183/366 (50%), Gaps = 9/366 (2%)
Query: 65 RVIHARVIKSLDY--RDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFS 122
+ IHAR++K+ D+ R+ +I +LV Y A A++LF ++ ++ SW +++ G
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII-GVK 148
Query: 123 KRGDLGNCMSVFSVMKSDLDLELNELTFI--SVISACALAKAREEGQYVHCCAVKLGMEL 180
R +G C L+ E+ F+ +V AC K G+ VH VK G+E
Sbjct: 149 CR--IGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLED 206
Query: 181 QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMR 240
V V ++L +MYGK G +D A K+F + ++N V+WN+++ QNG+ EAI FS MR
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR 266
Query: 241 LNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
G+ P T+ + L A + + H + G++ + + T+LLN Y K+G +
Sbjct: 267 KQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIE 326
Query: 301 ASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
+ VF + + D V ++SGY G +AI + E ++ D VT L+SA +
Sbjct: 327 YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Query: 361 HSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVW 420
+ + GK Q + + + S ++D+ +CG + DAK++ + E + +W
Sbjct: 387 RTENLKLGKE-VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILW 444
Query: 421 GALLGA 426
LL A
Sbjct: 445 NTLLAA 450
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 154/311 (49%), Gaps = 9/311 (2%)
Query: 118 VSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLG 177
VS K G++ +S+ + M +L + + ++ C + G+ +H +K G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFR-NLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG 100
Query: 178 --MELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINY 235
+ L+ Y K ++ A LF + +N+ SW +++ V + G A+
Sbjct: 101 DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMG 160
Query: 236 FSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSK 295
F M N +FPD + ++ +AC L R VHG + GL++ + + ++L ++Y K
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 296 IGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHL 355
G L+ + KVF EI + VA A++ GY +G EAI+ F ++G+EP VT +
Sbjct: 221 CGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTC 280
Query: 356 LSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY--SCMVDLLGRCGLLNDAKELIKNMPF 413
LSA ++ G V+EGK ++ V G++ LD+ + +++ + GL+ A E++ + F
Sbjct: 281 LSASANMGGVEEGKQS-HAIAIVNGME--LDNILGTSLLNFYCKVGLIEYA-EMVFDRMF 336
Query: 414 EPNSGVWGALL 424
E + W ++
Sbjct: 337 EKDVVTWNLII 347
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/448 (31%), Positives = 222/448 (49%), Gaps = 54/448 (12%)
Query: 25 CCTLLSETSVR----FHSISTYPRDPLVSTLLVALKSSSS---LYCCRVIHARVIKSLDY 77
C T SE ++ F S+ + P T + L SS L C R IH +IK+
Sbjct: 289 CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 78 RDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM 137
+G+ L+ Y G D++L FD + +K+ V WN+L+SG++ + D C+S+F M
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQM 407
Query: 138 KSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGF 197
+ E TF + + +C + E Q +H V++G E V+++L+ Y K
Sbjct: 408 L-QMGFRPTEYTFSTALKSCCVT----ELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQL 462
Query: 198 VDSAFKLF-WA-------------------------------MTEQNMVSWNSMVAVCTQ 225
++ A L WA + + + VSWN +A C++
Sbjct: 463 MNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSR 522
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVI----FTCGLDE 281
+ E I F M + + PD+ T VS+L C L L ++HG+I F+C
Sbjct: 523 SDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCA--- 579
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
+ + L+++Y K G + + KVF E + + + TA++S +HG G EA++ F+ T+
Sbjct: 580 DTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETL 639
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
G +PD V+F +L+AC H G+V EG FQ M D YGV+P +DHY C VDLL R G L
Sbjct: 640 SLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYL 698
Query: 402 NDAKELIKNMPFEPNSGVWGALL-GASR 428
+A+ LI+ MPF ++ VW L G +R
Sbjct: 699 KEAEHLIREMPFPADAPVWRTFLDGCNR 726
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 139/281 (49%), Gaps = 2/281 (0%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK 138
D F+G L+ Y + A+ +F++MP K +WN ++S RG L CM F +
Sbjct: 148 DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELV 207
Query: 139 SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFV 198
+ L E +F+ V+ + K + + +HC A K G++ ++ VVN+LI+ YGK G
Sbjct: 208 R-MGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNT 266
Query: 199 DSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQAC 258
A ++F ++VSWN+++ ++ P +A+ F M +G P++ T VS+L
Sbjct: 267 HMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVS 326
Query: 259 ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACT 318
+ L +HG++ G + I + L++ Y+K G L S F I + V
Sbjct: 327 SLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWN 386
Query: 319 AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSAC 359
A+LSGYA G + F + ++ G P TF+ L +C
Sbjct: 387 ALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 184/382 (48%), Gaps = 8/382 (2%)
Query: 48 VSTLLVALKSSSSLYCCRVIHARVIK--SLDYRDGFIGDQLVSCYLNMGATPDAQLLFDE 105
V +LL + + S + +HA I S+ + ++ + ++S Y +G A +FD+
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 106 MPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
MP ++ VS+N+++ G+SK GD+ VFS M+ L N+ T +S + +CA R
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLP-NQST-VSGLLSCASLDVRA- 131
Query: 166 GQYVHCCAVKLGMELQVKVVNT-LINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCT 224
G +H ++K G+ + V T L+ +YG+ ++ A ++F M +++ +WN M+++
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENIT 284
G E + +F + G E++ + +L+ + + + +H GLD I+
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
+V +L++ Y K G + + ++F + D V+ A++ A +A++ F G
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
P+ T+ +L S L+ G+ ++ G + + + ++D +CG L D+
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK-NGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 405 KELIKNMPFEPNSGVWGALLGA 426
+ L + + N W ALL
Sbjct: 371 R-LCFDYIRDKNIVCWNALLSG 391
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/462 (29%), Positives = 231/462 (50%), Gaps = 46/462 (9%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
+++H+ IK D +G L+S Y G A+ +FDEMP ++ +WN+++ G+
Sbjct: 66 KLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSN 125
Query: 125 GDLGNCMSVFSVMKSDLDLEL----NELTFISVISACA----LAKARE-------EGQYV 169
GD +V+ S L E+ N +T+I +I + KARE E + V
Sbjct: 126 GD--------AVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNV 177
Query: 170 HCCAVKLGM------------------ELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
+V LG+ E V + +++ Y + G V A +F+ + +
Sbjct: 178 KAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFAR 237
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVH 271
++V WN+++A QNG ++AI+ F M+ G PD T+ S+L AC + VH
Sbjct: 238 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 272 GVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGT 331
+I G++ N + L+++Y+K G L + VF IS C +M+S A+HG G
Sbjct: 298 SLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGK 357
Query: 332 EAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCM 391
EA++ F ++PD +TF +L+AC H G + EG F M V+P + H+ C+
Sbjct: 358 EALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMK-TQDVKPNVKHFGCL 416
Query: 392 VDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAA---ENLIALDP 448
+ LLGR G L +A L+K M +PN V GALLGA +V+ + + ++ E ++
Sbjct: 417 IHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITN 476
Query: 449 SDPRNYIM-LSNIYSASGLWSDAAKVRALMKTKVLARNPGCS 489
S N++ +SN+Y+ + W A +R M+ + L ++PG S
Sbjct: 477 SYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 139/288 (48%), Gaps = 32/288 (11%)
Query: 153 VISACALAKAREE-GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
++ ACA R G+ +H ++K G+ V V ++LI+MYGK G V SA K+F M E+
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 212 NMVSWNSMVAVCTQNGRP-------------NEAINYFSMMRLNG----------LF--- 245
N+ +WN+M+ NG + + M++ G LF
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM 170
Query: 246 PDEATMVSLLQACETLHL--RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
P E V +++ R++ +A F ++N + + +++ Y +IG ++ +
Sbjct: 171 PFELKNVKAWSVMLGVYVNNRKMEDARK--FFEDIPEKNAFVWSLMMSGYFRIGDVHEAR 228
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
+F + D V +++GYA +G +AI F EG EPD VT + +LSAC+ SG
Sbjct: 229 AIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSG 288
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
+D G+ +++ G++ + ++D+ +CG L +A + +++
Sbjct: 289 RLDVGREVHSLINH-RGIELNQFVSNALIDMYAKCGDLENATSVFESI 335
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 206/413 (49%), Gaps = 33/413 (7%)
Query: 111 FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVH 170
+S +S ++ +G+ +++F M S L L+ F + +CA A G VH
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 171 CCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPN 230
+VK V L++MYGK V A KLF + ++N V WN+M++ T G+
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 231 EAINYFSMMR-----------LNGLF----------------------PDEATMVSLLQA 257
EA+ + M + GL P+ T+++L+ A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 258 CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVAC 317
C + RL++ +H F ++ + + + L+ Y + G + VF + D VA
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 318 TAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSD 377
++++S YA+HG A++ F+ + PD + F ++L ACSH+GL DE YF+ M
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 378 VYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGK 437
YG++ DHYSC+VD+L R G +A ++I+ MP +P + WGALLGA R Y I + +
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAE 371
Query: 438 EAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSF 490
AA L+ ++P +P NY++L IY + G +A ++R MK + +PG S+
Sbjct: 372 IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 160/359 (44%), Gaps = 53/359 (14%)
Query: 34 VRFHSISTYPRDPLVSTLLVALKSSSSLY---CCRVIHARVIKSLDYRDGFIGDQLVSCY 90
++ HS P D V +L ALKS ++ + +HA +KS + F+G L+ Y
Sbjct: 36 LQMHSSFALPLDAHVFSL--ALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMY 93
Query: 91 LNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS----------- 139
+ A+ LFDE+P ++ V WN+++S ++ G + + ++ M
Sbjct: 94 GKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAII 153
Query: 140 ---------------------DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGM 178
+ + N +T ++++SAC+ A + +H A + +
Sbjct: 154 KGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLI 213
Query: 179 ELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSM 238
E ++ + L+ YG+ G + +F +M ++++V+W+S+++ +G A+ F
Sbjct: 214 EPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQE 273
Query: 239 MRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT-----CGLDENITIVTTLLNLY 293
M L + PD+ +++L+AC H EA+ V F GL + + L+++
Sbjct: 274 MELAKVTPDDIAFLNVLKACS--HAGLADEAL--VYFKRMQGDYGLRASKDHYSCLVDVL 329
Query: 294 SKIGRLNASCKVFAEI-SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM--EPDH 349
S++GR + KV + KP A+L +G I+ E RE + EP++
Sbjct: 330 SRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG----EIELAEIAARELLMVEPEN 384
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 235/486 (48%), Gaps = 35/486 (7%)
Query: 75 LDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPN-KDFVSWNSLVSGFSKRGDLGNCMSV 133
+++ D + +++ Y G A +F P D +SWN+L++G+++ G + +
Sbjct: 188 VEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKM 247
Query: 134 FSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYG 193
M+ + L+ +E +F +V++ + K+ + G+ VH +K G V + ++++Y
Sbjct: 248 AVSMEEN-GLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYC 306
Query: 194 K-------------FGFVD------------------SAFKLFWAMTEQNMVSWNSMVAV 222
K +GF + A +LF +++E+N+V W +M
Sbjct: 307 KCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLG 366
Query: 223 CTQNGRPNEAINYFSMMRLNGL-FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE 281
+P+ + N PD MVS+L AC + +HG G+
Sbjct: 367 YLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILM 426
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
+ +VT +++YSK G + + ++F + D V AM++G A HG ++ Q FE
Sbjct: 427 DKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT 486
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
G +PD +TF LLSAC H GLV EG+ YF+ M + Y + P HY+CM+DL G+ L
Sbjct: 487 EGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRL 546
Query: 402 NDAKELIKNM-PFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNI 460
+ A EL++ + E ++ + GA L A N + KE E L+ ++ S+ YI ++N
Sbjct: 547 DKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANA 606
Query: 461 YSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEV 520
Y++SG W + ++R M+ K L GCS+ + H F D SH +++ I+ L V
Sbjct: 607 YASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFV 666
Query: 521 MSKIQE 526
+ E
Sbjct: 667 TKDLSE 672
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 162/359 (45%), Gaps = 49/359 (13%)
Query: 50 TLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYL---NM------------- 93
+L L S SL + +HARV+K+ Y + F+ +V Y NM
Sbjct: 265 AVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFG 324
Query: 94 ---------------GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK 138
G +A+ LFD + K+ V W ++ G+ +L SV + +
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL---NLRQPDSVLELAR 381
Query: 139 SDLDLELN---ELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKF 195
+ + E N L +SV+ AC+L E G+ +H +++ G+ + K+V ++MY K
Sbjct: 382 AFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKC 441
Query: 196 GFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
G V+ A ++F + E++ V +N+M+A C +G ++ +F M G PDE T ++LL
Sbjct: 442 GNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALL 501
Query: 256 QACETLHLRRLVEA---VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKP 312
AC H ++E +I + T +++LY K RL+ + ++ I
Sbjct: 502 SACR--HRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGI--- 556
Query: 313 DKVACTAMLSGYAMHGC----GTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDE 367
D+V A++ G ++ C TE ++ E + + + + +A + SG DE
Sbjct: 557 DQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDE 615
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 183/449 (40%), Gaps = 77/449 (17%)
Query: 49 STLLVALKSSSSLYCCRVIHAR-VIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFD-EM 106
S LV L S S L + AR V + R+ + + +++ Y+ +A+ LF+ +
Sbjct: 26 SNQLVNLYSKSGL----LREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDN 81
Query: 107 PNKDFVSWNSLVSGFSKR-GDLGNCMSVFSVM--KSDLDLELNELTFISVISACALAKAR 163
+D +++N+L+SGF+K G + +F M K D+ +++ T +++ A
Sbjct: 82 CERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNV 141
Query: 164 EEGQYVHCCAVKLGMELQVKVVNTLINMY---GKF------------------------- 195
G+ +H VK G + V++LI+MY GKF
Sbjct: 142 FYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIA 201
Query: 196 -----GFVDSAFKLFWAMTEQN-MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
G +D A +FW E N +SWN+++A QNG EA+ M NGL DE
Sbjct: 202 AYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEH 261
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
+ ++L +L ++ + VH + G N + + ++++Y K G + +
Sbjct: 262 SFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLY 321
Query: 310 SKPDKVACTAMLSGYAMHGCGTEAIQFFER------------------------------ 339
+ + ++M+ GY+ G EA + F+
Sbjct: 322 GFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELAR 381
Query: 340 --TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGR 397
E PD + +L ACS ++ GK S G+ + VD+ +
Sbjct: 382 AFIANETNTPDSLVMVSVLGACSLQAYMEPGKE-IHGHSLRTGILMDKKLVTAFVDMYSK 440
Query: 398 CGLLNDAKELIKNMPFEPNSGVWGALLGA 426
CG + A E I + FE ++ ++ A++
Sbjct: 441 CGNVEYA-ERIFDSSFERDTVMYNAMIAG 468
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 195/387 (50%), Gaps = 34/387 (8%)
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF 205
+ TF+S+IS + G+ H A+K G + + V N+L++MY G +D A KLF
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLF 176
Query: 206 WAMTEQNMVSWNSMVAVCTQNG-------------------------------RPNEAIN 234
+ ++++VSWNS++A +NG P +I+
Sbjct: 177 VEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSIS 236
Query: 235 YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
F M G +E+T+V LL AC + +VH + L+ ++ I T L+++Y
Sbjct: 237 LFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYG 296
Query: 295 KIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTH 354
K + + ++F +S +KV M+ + +HG ++ FE I + PD VTF
Sbjct: 297 KCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVG 356
Query: 355 LLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFE 414
+L C+ +GLV +G+ Y+ +M D + ++P H CM +L G +A+E +KN+P E
Sbjct: 357 VLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDE 416
Query: 415 ---PNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAA 471
P S W LL +SR N ++G+ A++LI DP + + Y +L NIYS +G W D
Sbjct: 417 DVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVN 476
Query: 472 KVRALMKTKVLARNPGCSFIEHGNKIH 498
+VR ++K + + R PGC ++ +H
Sbjct: 477 RVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 164/375 (43%), Gaps = 60/375 (16%)
Query: 63 CCRVIH--ARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSG 120
CC + ++ + RD + +++ + G A LFDEMP+K+ +SWN ++S
Sbjct: 165 CCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISA 224
Query: 121 FSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMEL 180
+ + G +S+F M + NE T + +++AC + +EG+ VH ++ +
Sbjct: 225 YLGANNPGVSISLFREMVR-AGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNS 283
Query: 181 QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMR 240
V + LI+MYGK V A ++F +++ +N V+WN M+ +GRP + F M
Sbjct: 284 SVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM- 342
Query: 241 LNGLF-PDEATMVSLLQACETLHLRRLVEAVHGVIF-TCGLDENITIVTTLLNLYSKIGR 298
+NG+ PDE T V +L C L ++ + ++ + N + NLYS G
Sbjct: 343 INGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAG- 401
Query: 299 LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA 358
F E EA + + E + P+ + +LLS+
Sbjct: 402 -------FPE-----------------------EAEEALKNLPDEDVTPESTKWANLLSS 431
Query: 359 CSHSGLVDEGK--------------HYFQVMSDVYGVQPRLDHYSCMVDL-----LGR-- 397
+G G+ Y+ ++ ++Y V R + + + ++ +GR
Sbjct: 432 SRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIP 491
Query: 398 -CGLLNDAKELIKNM 411
CGL+ D KE++ +
Sbjct: 492 GCGLV-DLKEIVHGL 505
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 102/248 (41%), Gaps = 35/248 (14%)
Query: 229 PNEAIN-YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVT 287
P +A+ YF ++R G PD T VSL+ E + HG G D+ + +
Sbjct: 99 PKQALGFYFDILRF-GFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 288 TLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEA-------------- 333
+L+++Y+ G L+ + K+F EI K D V+ ++++G +G A
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 334 -----------------IQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS 376
I F +R G + + T LL+AC S + EG+ +
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 377 DVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIG 436
+ + + + ++D+ G+C + A+ + ++ N W ++ A ++ G
Sbjct: 278 RTF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMILAHCLHGRPEGG 335
Query: 437 KEAAENLI 444
E E +I
Sbjct: 336 LELFEAMI 343
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 41/278 (14%)
Query: 51 LLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKD 110
LL A S+ L R +HA +I++ I L+ Y A+ +FD + ++
Sbjct: 256 LLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRN 315
Query: 111 FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVH 170
V+WN ++ G + +F M + + L +E+TF+ V+ CA A +GQ +
Sbjct: 316 KVTWNVMILAHCLHGRPEGGLELFEAMINGM-LRPDEVTFVGVLCGCARAGLVSQGQSYY 374
Query: 171 CCAVKLGMELQVKV----VNTLINMYGKFGFVDSAFKLFWAMTEQNM----VSWNSMVAV 222
V E Q+K + N+Y GF + A + + ++++ W ++++
Sbjct: 375 SLMVD---EFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSS 431
Query: 223 CTQNGRP------------NEAINY------FSMMRLNGLFPD--------EATMVSLLQ 256
G P + +NY ++ + G + D + + +
Sbjct: 432 SRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIP 491
Query: 257 ACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
C + L+ E VHG+ C E + T+L YS
Sbjct: 492 GCGLVDLK---EIVHGLRLGCKEAEKVFTETSLEKCYS 526
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 190/382 (49%), Gaps = 44/382 (11%)
Query: 149 TFISVISACALAKAREEG-----QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFK 203
TF V ACA A++ G + +HC A++ G+ + +NTLI +Y +DSA +
Sbjct: 117 TFPFVFKACA---AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQ 173
Query: 204 LFW-------------------------------AMTEQNMVSWNSMVAVCTQNGRPNEA 232
LF +M +++VSWNS+++ Q EA
Sbjct: 174 LFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREA 233
Query: 233 INYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNL 292
I F M GL PD +VS L AC + +A+H L + + T L++
Sbjct: 234 IKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDF 293
Query: 293 YSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTF 352
Y+K G ++ + ++F S AM++G AMHG G + +F + + G++PD VTF
Sbjct: 294 YAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTF 353
Query: 353 THLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP 412
+L CSHSGLVDE ++ F M +Y V + HY CM DLLGR GL+ +A E+I+ MP
Sbjct: 354 ISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMP 413
Query: 413 FEPNSG----VWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWS 468
+ + W LLG R++ NI I ++AA + AL P D Y ++ +Y+ + W
Sbjct: 414 KDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWE 473
Query: 469 DAAKVRALM-KTKVLARNPGCS 489
+ KVR ++ + K + +N G S
Sbjct: 474 EVVKVREIIDRDKKVKKNVGFS 495
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Query: 99 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 158
A+ LFD MP +D VSWNSL+SG+++ + +F M + L L+ + + +S +SACA
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVA-LGLKPDNVAIVSTLSACA 260
Query: 159 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNS 218
+ ++G+ +H + + + + L++ Y K GF+D+A ++F +++ + +WN+
Sbjct: 261 QSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNA 320
Query: 219 MVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQAC 258
M+ +G ++YF M +G+ PD T +S+L C
Sbjct: 321 MITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGC 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 97/219 (44%), Gaps = 9/219 (4%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + + + L A S + IH + + D F+ LV Y G A +
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F+ +K +WN++++G + G+ + F M S ++ + +TFISV+ C+ +
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSS-GIKPDGVTFISVLVGCSHSGL 365
Query: 163 REEGQYVHCCAVKL-GMELQVKVVNTLINMYGKFGFVDSAFKLFWAM-----TEQNMVSW 216
+E + + L + ++K + ++ G+ G ++ A ++ M + +++W
Sbjct: 366 VDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
+ ++ C +G N I + R+ L P++ + ++
Sbjct: 426 SGLLGGCRIHG--NIEIAEKAANRVKALSPEDGGVYKVM 462
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 231/501 (46%), Gaps = 73/501 (14%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD-LE 144
+V Y G +A LF EMP ++ VSW +++SGF+ + +F MK D+D +
Sbjct: 237 MVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVS 296
Query: 145 LNELTFISVISACA--LAKAREEGQYVHCCAVKLGME----------------------- 179
N T IS+ AC + R G+ +H + G E
Sbjct: 297 PNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIA 356
Query: 180 ---------LQVKVVNTLINMYGKFGFVDSAFKLFWAMTE-QNMVSWNSMVAVCTQNGRP 229
++ N +IN Y K G ++ A LF + + VSW SM+ + G
Sbjct: 357 SAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDV 416
Query: 230 NEAINYF---------------SMMRLNGLFPDEATMVSLLQACETLHLRRLVEA----- 269
+ A F S + N LF + A+++S + C L
Sbjct: 417 SRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSA 476
Query: 270 -----------VHGVI--FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVA 316
+H VI T D ++ + +L+++Y+K G + + ++FA++ + D V+
Sbjct: 477 GATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVS 536
Query: 317 CTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS 376
+M+ G + HG +A+ F+ + G +P+ VTF +LSACSHSGL+ G F+ M
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK 596
Query: 377 DVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGAS----RVYHN 432
+ Y +QP +DHY M+DLLGR G L +A+E I +PF P+ V+GALLG R
Sbjct: 597 ETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDA 656
Query: 433 ISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIE 492
I + AA L+ LDP + ++ L N+Y+ G ++R M K + + PGCS++
Sbjct: 657 EGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVV 716
Query: 493 HGNKIHRFVVDDYSHPDSDKI 513
+ + F+ D S ++ ++
Sbjct: 717 VNGRANVFLSGDKSASEAAQM 737
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 204/471 (43%), Gaps = 95/471 (20%)
Query: 94 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
G + DA LFDEMP ++ VSWN+LV+G + GD+ VF M S V
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR-----------DV 200
Query: 154 ISACALAKAREEGQYVHCCAVKLG--MELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
+S A+ K E + + G E V +++ Y ++G V A++LF M E+
Sbjct: 201 VSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER 260
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMR--LNGLFPDEATMVSLLQACETL--HLRRLV 267
N+VSW +M++ N EA+ F M+ ++ + P+ T++SL AC L RRL
Sbjct: 261 NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLG 320
Query: 268 EAVHGVIFTCG------------------------------LDENITIVT--TLLNLYSK 295
E +H + + G L+E+ + + ++N Y K
Sbjct: 321 EQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLK 380
Query: 296 IGRLNASCKVFAEI-SKPDKVACTAMLSGYAMHGCGTEAIQFFER--------------- 339
G L + +F + S DKV+ T+M+ GY G + A F++
Sbjct: 381 NGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISG 440
Query: 340 ----------------TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYG-VQ 382
+R G++P + T++ LLS+ + +D+GKH V++
Sbjct: 441 LVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYD 500
Query: 383 PRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGAL-LGASRVYHNISIGKEAAE 441
P L + +V + +CG + DA E+ M + ++ W ++ +G S +H ++ + A
Sbjct: 501 PDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLS--HHGLA---DKAL 554
Query: 442 NLIA--LDPSDPRNYIMLSNIYSA---SGLWSDAAKVRALMKTKVLARNPG 487
NL LD N + + SA SGL + ++ MK + + PG
Sbjct: 555 NLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK-ETYSIQPG 604
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 157/350 (44%), Gaps = 22/350 (6%)
Query: 39 ISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYR-------------DGFIGDQ 85
+ Y L+++ L S L C +I R +K+ D D
Sbjct: 346 VHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTS 405
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
++ YL G A LF ++ +KD V+W ++SG + S+ S M L
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPL 465
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGM--ELQVKVVNTLINMYGKFGFVDSAFK 203
N T+ ++S+ ++G+++HC K + + + N+L++MY K G ++ A++
Sbjct: 466 NS-TYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 204 LFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHL 263
+F M +++ VSWNSM+ + +G ++A+N F M +G P+ T + +L AC L
Sbjct: 525 IFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGL 584
Query: 264 -RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAML 321
R +E + T + I ++++L + G+L + + + + PD A+L
Sbjct: 585 ITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALL 644
Query: 322 SGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS-HSGLVDEGKH 370
++ +A ER +E D V ++ C+ ++GL G+H
Sbjct: 645 GLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGL---GRH 691
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 68/294 (23%)
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQNM------------------------------VSW 216
+L++ Y K G++D A LF M E+N+ VSW
Sbjct: 82 SLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSW 141
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA------- 269
M+ +GR +A+ F M + + L++ + +++ +A
Sbjct: 142 TVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVV 201
Query: 270 -----VHGVIFTCGLDE-----------NITIVTTLLNLYSKIGRLNASCKVFAEISKPD 313
+ G I G++E N+ T+++ Y + G + + ++F E+ + +
Sbjct: 202 SWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERN 261
Query: 314 KVACTAMLSGYAMHGCGTEAIQFFERTIR--EGMEPDHVTFTHLLSACSHSGL----VDE 367
V+ TAM+SG+A + EA+ F + + + P+ T L AC G+ + E
Sbjct: 262 IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGE 321
Query: 368 GKHYFQVMSDVYGVQPRLDH----YSCMVDLLGRCGLLNDAKELIKNMPFEPNS 417
H QV+S+ + +DH +V + GL+ A+ L+ N F+ S
Sbjct: 322 QLHA-QVISNGW---ETVDHDGRLAKSLVHMYASSGLIASAQSLL-NESFDLQS 370
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 221/428 (51%), Gaps = 4/428 (0%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R IH I S D G +V Y G +A LF +P+ D WN ++ G+
Sbjct: 126 RCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCC 185
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G +++F++M+ + N T +++ S VH +K+ ++ V
Sbjct: 186 GFWDKGINLFNLMQHR-GHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYV 244
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
L+NMY + + SA +F +++E ++V+ +S++ ++ G EA++ F+ +R++G
Sbjct: 245 GCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK 304
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
PD + +L +C L + VH + GL+ +I + + L+++YSK G L +
Sbjct: 305 KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMS 364
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
+FA I + + V+ +++ G +HG + A + F + G+ PD +TF+ LL C HSGL
Sbjct: 365 LFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGL 424
Query: 365 VDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+++G+ F+ M +G++P+ +HY MV L+G G L +A E + ++ +SG+ GALL
Sbjct: 425 LNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALL 484
Query: 425 GASRVYHNISIGKEAAENLIALDPSDPRNY--IMLSNIYSASGLWSDAAKVRALMKTKVL 482
V+ N + + AEN I + + R+ +MLSN+Y+ G W + ++R +
Sbjct: 485 SCCEVHENTHLAEVVAEN-IHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYG 543
Query: 483 ARNPGCSF 490
+ PG S+
Sbjct: 544 GKLPGISW 551
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 165/349 (47%), Gaps = 8/349 (2%)
Query: 67 IHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD 126
+H+ V KS RD + QL Y A+ LFD P + WNS++ ++K
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQ 86
Query: 127 LGNCMSVFS-VMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVV 185
+S+FS +++S D + T+ + + + + + +H A+ G+
Sbjct: 87 FTTVLSLFSQILRS--DTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
+ ++ Y K G + A KLF ++ + ++ WN M+ G ++ IN F++M+ G
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
P+ TMV+L L + +VH LD + + L+N+YS+ + ++C V
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
F IS+PD VAC+++++GY+ G EA+ F G +PD V +L +C+
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 366 DEGKHYFQVMSDVYGVQPRLDHYSC--MVDLLGRCGLLNDAKELIKNMP 412
GK +V S V + LD C ++D+ +CGLL A L +P
Sbjct: 325 VSGK---EVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 10/260 (3%)
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV 220
+ R Q +H K + L Y + SA KLF E+++ WNS++
Sbjct: 19 QTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSII 78
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLD 280
+ + ++ FS + + PD T L + + + +HG+ GL
Sbjct: 79 RAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLG 138
Query: 281 ENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERT 340
+ + ++ YSK G + + K+F I PD M+ GY G + I F
Sbjct: 139 FDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
Query: 341 IREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS----CMVDLLG 396
G +P+ T L SGL+D + ++ LD +S +V++
Sbjct: 199 QHRGHQPNCYTMVALT-----SGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYS 253
Query: 397 RCGLLNDAKELIKNMPFEPN 416
RC + A + ++ EP+
Sbjct: 254 RCMCIASACSVFNSIS-EPD 272
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 217/436 (49%), Gaps = 19/436 (4%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R +HA +IK L+ Y G D+ +F+ + KD VSWN+L+SGF +
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRN 163
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G + VF+ M + +E++E T SV+ CA K ++G+ VH V G +L V +
Sbjct: 164 GKGKEALGVFAAMYRE-RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVV-L 221
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMT-EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG 243
+I+ Y G ++ A K++ ++ + V NS+++ C +N EA S R
Sbjct: 222 GTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR--- 278
Query: 244 LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
P+ + S L C + + +H V G + + L+++Y K G++ +
Sbjct: 279 --PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG--MEPDHVTFTHLLSACSH 361
+F I V+ T+M+ YA++G G +A++ F EG + P+ VTF ++SAC+H
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH 396
Query: 362 SGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNS---- 417
+GLV EGK F +M + Y + P +HY C +D+L + G + L++ M N
Sbjct: 397 AGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPC 456
Query: 418 GVWGALLGASRVYHNISIGKEAAENLIALDPSDPRN---YIMLSNIYSASGLWSDAAKVR 474
+W A+L A + +++ G+ A L ++ + P N Y+++SN Y+A G W ++R
Sbjct: 457 AIWVAVLSACSLNMDLTRGEYVARRL--MEETGPENASIYVLVSNFYAAMGKWDVVEELR 514
Query: 475 ALMKTKVLARNPGCSF 490
+K K L + G S
Sbjct: 515 GKLKNKGLVKTAGHSL 530
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 194/389 (49%), Gaps = 19/389 (4%)
Query: 99 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF-SVMKSDLDLELNELTFISVISAC 157
A LFDE+P +D S NS +S + G+ + +++F + ++ DL + TF V+ AC
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSH--TFTPVLGAC 94
Query: 158 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWN 217
+L E G+ VH +K G E LI+MY K+G + + ++F ++ E+++VSWN
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 218 SMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC 277
++++ +NG+ EA+ F+ M + E T+ S+++ C +L + + + VH ++
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT 214
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-KPDKVACTAMLSGYAMHGCGTEAIQF 336
G D + + T +++ YS +G +N + KV+ ++ D+V +++SG + EA
Sbjct: 215 GRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLL 273
Query: 337 FERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQV-MSDVYGVQPRLDHYSCMVDLL 395
R P+ + L+ CS + + GK V + + + +L + ++D+
Sbjct: 274 MSR-----QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKL--CNGLMDMY 326
Query: 396 GRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHN----ISIGKEAAENLIALDPSDP 451
G+CG + A+ + + +P + W +++ A V + + I +E E + P+
Sbjct: 327 GKCGQIVQARTIFRAIPSKSVVS-WTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSV 385
Query: 452 RNYIMLSNIYSASGLWSDAAKVRALMKTK 480
+++S A GL + + +MK K
Sbjct: 386 TFLVVISACAHA-GLVKEGKECFGMMKEK 413
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 27/201 (13%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQ-----LVSCYLNMGATP 97
P ++S+ L +S L+ + IH + R+GF+ D L+ Y G
Sbjct: 279 PNVRVLSSSLAGCSDNSDLWIGKQIHCVAL-----RNGFVSDSKLCNGLMDMYGKCGQIV 333
Query: 98 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL-NELTFISVISA 156
A+ +F +P+K VSW S++ ++ GD + +F M + L N +TF+ VISA
Sbjct: 334 QARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISA 393
Query: 157 CALAKAREEGQYVHCCAVKLGMELQVKVVNT------LINMYGKFGFVDSAFKLFWAMTE 210
CA A +EG+ C + M+ + ++V I++ K G + ++L M E
Sbjct: 394 CAHAGLVKEGK--ECFGM---MKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMME 448
Query: 211 QNMVS-----WNSMVAVCTQN 226
+ S W ++++ C+ N
Sbjct: 449 NDNQSIPCAIWVAVLSACSLN 469
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 146/479 (30%), Positives = 246/479 (51%), Gaps = 36/479 (7%)
Query: 40 STYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDA 99
S +P +S L ++S +L + IHA+++ + + + G +L+ Y + +T +
Sbjct: 3 SVFPGPRFLSLLQ---QNSKTLIQAKQIHAQLVINGCHDNSLFG-KLIGHYCSKPSTESS 58
Query: 100 Q-----LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFS--VMKSDLDLELNELTFIS 152
L+F + D +N+L+ SK D + +F+ KS L L LNE TF+
Sbjct: 59 SKLAHLLVFPRFGHPDKFLFNTLLK-CSKPED---SIRIFANYASKSSL-LYLNERTFVF 113
Query: 153 VISACALAKAREE---GQYVHCCAVKLGMELQVKVVNT-LINMYGKFGFVDSAFKLFWAM 208
V+ ACA + + G+ VH KLG + +++ T L++ Y K G + A K+F M
Sbjct: 114 VLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEM 173
Query: 209 TEQNMVSWNSMVA-VCTQNGRPN----EAINYFSMMRL--NGLFPDEATMVSLLQACETL 261
E+ V+WN+M+ C+ + N +A+ F +G+ P + TMV +L A
Sbjct: 174 PERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQT 233
Query: 262 HLRRLVEAVHGVIFTCGL--DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTA 319
L + VHG I G + ++ I T L+++YSK G LN + VF + + T+
Sbjct: 234 GLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTS 293
Query: 320 MLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVY 379
M +G A++G G E R G++P+ +TFT LLSA H GLV+EG F+ M +
Sbjct: 294 MATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRF 353
Query: 380 GVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEA 439
GV P ++HY C+VDLLG+ G + +A + I MP +P++ + +L A +Y +G+E
Sbjct: 354 GVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEI 413
Query: 440 AENLIALDPSDPR-------NYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFI 491
+ L+ ++ D + +Y+ LSN+ + G W + K+R MK + + PG SF+
Sbjct: 414 GKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 190/378 (50%), Gaps = 29/378 (7%)
Query: 243 GLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNAS 302
G PD V L ++C L + VH + + +++++ + + +
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 303 CKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHS 362
+VF + D + M+ Y+ +G G +A+ FE + G++P+ TF + AC+
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 363 GLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGA 422
G ++E +F M + +G+ P+ +HY ++ +LG+CG L +A++ I+++PFEP + W A
Sbjct: 351 GGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEA 410
Query: 423 LLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVL 482
+ +R++ +I + E ++ +DPS +A++ +
Sbjct: 411 MRNYARLHGDIDLEDYMEELMVDVDPS------------------------KAVINK--I 444
Query: 483 ARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGFVSETESILHDVAE 542
P SF E + + ++ + +K + M+ + +V +T +LHD+ +
Sbjct: 445 PTPPPKSFKETNMVTSKSRILEFR---NLTFYKDEAKEMAAKKGVVYVPDTRFVLHDIDQ 501
Query: 543 EIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRD 602
E K + HSE++A+AYG++ + L IIKNLR+C DCH K +S I R +I+RD
Sbjct: 502 EAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRD 561
Query: 603 AKRFHHFSDGLCSCGDYW 620
KRFHHF DG CSCGDYW
Sbjct: 562 NKRFHHFKDGKCSCGDYW 579
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 63/112 (56%)
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
F+ + +CA K+ E + VH ++ K+ N +I+M+G+ + A ++F M
Sbjct: 239 FVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMV 298
Query: 210 EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL 261
+++M SW+ M+ + NG ++A++ F M +GL P+E T +++ AC T+
Sbjct: 299 DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 217/438 (49%), Gaps = 34/438 (7%)
Query: 39 ISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIG----DQLVSC----- 89
++ P + VS++++A S +L +VIHA +K D + D V C
Sbjct: 257 LNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLES 316
Query: 90 ----------------------YLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDL 127
Y G T +A+ LFD MP ++ VSWN+++ G+ +
Sbjct: 317 ARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEW 376
Query: 128 GNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNT 187
+ ++M+ +++ ++ +T + +++ C+ + G+ H + G + V V N
Sbjct: 377 DEALDFLTLMRQEIE-NIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANA 435
Query: 188 LINMYGKFGFVDSAFKLFWAMTE-QNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFP 246
L++MYGK G + SA F M+E ++ VSWN+++ + GR +A+++F M++ P
Sbjct: 436 LLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAK-P 494
Query: 247 DEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF 306
+ T+ +LL C + L +A+HG + G ++ I ++++YSK + + +VF
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVF 554
Query: 307 AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
E + D + +++ G +G E + F EG++PDHVTF +L AC G V+
Sbjct: 555 KEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVE 614
Query: 367 EGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
G YF MS Y + P+++HY CM++L + G L+ +E + MPF+P + + A
Sbjct: 615 LGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDA 674
Query: 427 SRVYHNISIGKEAAENLI 444
+ Y +G AA+ L+
Sbjct: 675 CQRYRWSKLGAWAAKRLM 692
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 176/384 (45%), Gaps = 40/384 (10%)
Query: 81 FIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD 140
F+ ++ + Y G DA+ LF+EMP +D SWN++++ ++ G +F M D
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 141 LDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
+ E +F V+ +C L + +HC VK G V + +++++YGK +
Sbjct: 157 -GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 201 AFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEA-INYFSMMRLNGLFPDEATMVSLLQACE 259
A ++F + + VSWN +V + G +EA + +F M+ LN + P T+ S++ AC
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELN-VRPLNHTVSSVMLACS 274
Query: 260 TLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTA 319
+ + +H + + + + T++ ++Y K RL ++ +VF + D + T+
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTS 334
Query: 320 MLSGYAMHGCGTEAIQFF----ERTI--------------------------REGMEP-D 348
+SGYAM G EA + F ER I R+ +E D
Sbjct: 335 AMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 349 HVTFTHLLSACSHSGLVDEGKHYFQVMSDVY--GVQPRLDHYSCMVDLLGRCGLLNDAKE 406
+VT +L+ CS V GK Q +Y G + + ++D+ G+CG L A
Sbjct: 395 NVTLVWILNVCSGISDVQMGK---QAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANI 451
Query: 407 LIKNMPFEPNSGVWGALL-GASRV 429
+ M + W ALL G +RV
Sbjct: 452 WFRQMSELRDEVSWNALLTGVARV 475
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 145/332 (43%), Gaps = 35/332 (10%)
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G++ +SV + L E F S S + +AR+ V V + +
Sbjct: 43 GNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARK----VQSHLVTFSPLPPIFL 98
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
+N I YGK G VD A +LF M E++ SWN+++ C QNG +E F M +G+
Sbjct: 99 LNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGV 158
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
E + +L++C + RL+ +H + G N+ + T+++++Y K ++ + +
Sbjct: 159 RATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARR 218
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
VF EI P V+ ++ Y G EA+ F + + + P + T + ++ ACS S
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 365 VDEGK--HYFQV-------------MSDVYGVQPRLD---------------HYSCMVDL 394
++ GK H V + D+Y RL+ ++ +
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSG 338
Query: 395 LGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
GL +A+EL MP E N W A+LG
Sbjct: 339 YAMSGLTREARELFDLMP-ERNIVSWNAMLGG 369
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 213/423 (50%), Gaps = 3/423 (0%)
Query: 82 IGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
+ + ++ Y +G A +F M ++D VSWN L+ S G+ + F +M+ ++
Sbjct: 171 VWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMR-EM 229
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
+++ +E T V+S C+ + +G+ +K+G V+ I+M+ K +D +
Sbjct: 230 EIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDS 289
Query: 202 FKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL 261
KLF + + + V NSM+ + + +A+ F + + PD+ T S+L + +
Sbjct: 290 VKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV 349
Query: 262 HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAML 321
L + VH ++ G D + + T+L+ +Y K G ++ + VFA+ D + ++
Sbjct: 350 MLDHGAD-VHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVI 408
Query: 322 SGYAMHGCGTEAIQFFERTI-REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYG 380
G A + E++ F + + + ++PD VT +L AC ++G V+EG F M +G
Sbjct: 409 MGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHG 468
Query: 381 VQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAA 440
V P +HY+C+++LL R G++N+AK++ +PFEP+S +W +L AS + + + A
Sbjct: 469 VNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVA 528
Query: 441 ENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRF 500
+ ++ +P Y++L IY + W ++ K+R M L G S I + + F
Sbjct: 529 KTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Query: 501 VVD 503
D
Sbjct: 589 EAD 591
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 164/333 (49%), Gaps = 36/333 (10%)
Query: 58 SSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDA-QL--------------- 101
S S +++HA+++++ R + G++ + Y G+ +A QL
Sbjct: 17 SKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVC 76
Query: 102 ---------------LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELN 146
LFDEMP +D VSWN+++SG G + VF M+ ++
Sbjct: 77 LKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQR-WEIRPT 135
Query: 147 ELTFISVISACALAKAREEGQYVHCCAVKLGM-ELQVKVVNTLINMYGKFGFVDSAFKLF 205
E TF S+++ +L G+ +H A+ G+ + V N++++MY + G D A +F
Sbjct: 136 EFTF-SILA--SLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVF 192
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRR 265
M ++++VSWN ++ C+ +G A++ F +MR + PDE T+ ++ C L
Sbjct: 193 LTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELS 252
Query: 266 LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYA 325
+ + G N ++ ++++SK RL+ S K+F E+ K D V C +M+ Y+
Sbjct: 253 KGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYS 312
Query: 326 MHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA 358
H CG +A++ F + + + PD TF+ +LS+
Sbjct: 313 WHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 5/219 (2%)
Query: 194 KFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVS 253
K G++++A LF M E+++VSWN+M++ G I F M+ + P E T S
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF-S 140
Query: 254 LLQACETLHLRRLVEAVHGVIFTCGLDE-NITIVTTLLNLYSKIGRLNASCKVFAEISKP 312
+L + T R E +HG G+ N+ + +++++Y ++G + + VF +
Sbjct: 141 ILASLVT--CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 313 DKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYF 372
D V+ ++ + G A+ F ++PD T + ++S CS + +GK
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 373 QVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
+ + G +D+ +C L+D+ +L + +
Sbjct: 259 ALCIKM-GFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 202/414 (48%), Gaps = 37/414 (8%)
Query: 114 WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCA 173
+N+L+ + G+ +++F+ M + ++ N LTF S+I A + + G +H A
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLAS-HVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 174 VKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAI 233
+K G V + + YG+ G ++S+ K+F + +V+ NS++ C +NG + A
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 234 NYFSMMR----------LNG------------------------LFPDEATMVSLLQACE 259
YF M +NG + P+EAT VS+L +C
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 260 TLHLR--RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVAC 317
RL + +HG + + + T+ T LL++Y K G L + +F +I A
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 318 TAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSD 377
A++S A +G +A++ FE + P+ +T +L+AC+ S LVD G F +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 378 VYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGK 437
Y + P +HY C+VDL+GR GLL DA I+++PFEP++ V GALLGA +++ N +G
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 438 EAAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFI 491
+ LI L P Y+ LS + WS+A K+R M + + P S +
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 40/286 (13%)
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD--LELNELTFISVISACAL- 159
F MP D VSW ++++GFSK+G + VF M + + NE TF+SV+S+CA
Sbjct: 175 FQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANF 234
Query: 160 -AKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNS 218
G+ +H + + L + L++MYGK G ++ A +F + ++ + +WN+
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 219 MVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCG 278
+++ NGRP +A+ F MM+ + + P+ T++++L AC L
Sbjct: 295 IISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKL--------------- 339
Query: 279 LDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
V + L+S I C + I + C L G A G +A F +
Sbjct: 340 -------VDLGIQLFSSI------CSEYKIIPTSEHYGCVVDLIGRA--GLLVDAANFIQ 384
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPR 384
EPD LL AC + G V + G+QP+
Sbjct: 385 SL---PFEPDASVLGALLGACKIHENTELGN---TVGKQLIGLQPQ 424
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 190/382 (49%), Gaps = 9/382 (2%)
Query: 27 TLLSETSVRFHSISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDY-RDGFIGDQ 85
T++SE + YP +++T+L L +L + +HA V+KS +Y F+
Sbjct: 305 TMISEEKI-------YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG 357
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
L+ Y G + +F ++ +SW +L+SG++ G + M+ +
Sbjct: 358 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE-GFRP 416
Query: 146 NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLF 205
+ +T +V+ CA +A ++G+ +HC A+K V +V +L+ MY K G + +LF
Sbjct: 417 DVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLF 476
Query: 206 WAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRR 265
+ ++N+ +W +M+ +N I F +M L+ PD TM +L C L +
Sbjct: 477 DRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALK 536
Query: 266 LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYA 325
L + +HG I + + ++ +Y K G L ++ F ++ + TA++ Y
Sbjct: 537 LGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYG 596
Query: 326 MHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRL 385
+ +AI FE+ + G P+ TFT +LS CS +G VDE +F +M +Y +QP
Sbjct: 597 CNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSE 656
Query: 386 DHYSCMVDLLGRCGLLNDAKEL 407
+HYS +++LL RCG + +A+ L
Sbjct: 657 EHYSLVIELLNRCGRVEEAQRL 678
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 191/382 (50%), Gaps = 11/382 (2%)
Query: 49 STLLVALKSSSSLYCCRVIHARV-IKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP 107
S LL A SL + +H + I L+ + F+ +LV Y G+ DAQ +FDE
Sbjct: 115 SALLEACVRRKSLLHGKQVHVHIRINGLESNE-FLRTKLVHMYTACGSVKDAQKVFDEST 173
Query: 108 NKDFVSWNSLVSG--FSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
+ + SWN+L+ G S + + +S F+ M+ +L ++LN + +V + A A A +
Sbjct: 174 SSNVYSWNALLRGTVISGKKRYQDVLSTFTEMR-ELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQ 225
G H A+K G+ V + +L++MY K G V A ++F + E+++V W +M+A
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 226 NGRPNEAINYF-SMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG-VIFTCGLDENI 283
N R EA+ F +M+ ++P+ + ++L + +L + VH V+ + E
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 284 TIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE 343
+ + L++LY K G + + +VF + + ++ TA++SGYA +G +A++ +E
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE 412
Query: 344 GMEPDHVTFTHLLSACSHSGLVDEGKH-YFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLN 402
G PD VT +L C+ + +GK + + +++ P + + ++ + +CG+
Sbjct: 413 GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF--LPNVSLVTSLMVMYSKCGVPE 470
Query: 403 DAKELIKNMPFEPNSGVWGALL 424
L + + N W A++
Sbjct: 471 YPIRLFDRLE-QRNVKAWTAMI 491
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 179/386 (46%), Gaps = 15/386 (3%)
Query: 48 VSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP 107
+S + + +S+L HA IK+ + F+ LV Y G A+ +FDE+
Sbjct: 217 LSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIV 276
Query: 108 NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQ 167
+D V W ++++G + + +F M S+ + N + +++ KA + G+
Sbjct: 277 ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGK 336
Query: 168 YVHCCAVKLGMELQVKVVNT-LINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
VH +K ++ V++ LI++Y K G + S ++F+ ++N +SW ++++ N
Sbjct: 337 EVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAAN 396
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIV 286
GR ++A+ M+ G PD T+ ++L C L + + +H N+++V
Sbjct: 397 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 456
Query: 287 TTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEA-IQFFERTIREGM 345
T+L+ +YSK G ++F + + + A TAM+ Y + C A I+ F +
Sbjct: 457 TSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCY-VENCDLRAGIEVFRLMLLSKH 515
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKH-YFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
PD VT +L+ CS + GK + ++ + P + + ++ + G+CG L A
Sbjct: 516 RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSA 573
Query: 405 KELIKNMPFEP----NSGVWGALLGA 426
N F+ S W A++ A
Sbjct: 574 -----NFSFDAVAVKGSLTWTAIIEA 594
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 147/311 (47%), Gaps = 9/311 (2%)
Query: 121 FSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMEL 180
F+++ +L +++ ++ + +N TF +++ AC K+ G+ VH G+E
Sbjct: 86 FARQNNLEVALTILDYLEQR-GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLES 144
Query: 181 QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMV--AVCTQNGRPNEAINYFSM 238
+ L++MY G V A K+F T N+ SWN+++ V + R + ++ F+
Sbjct: 145 NEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTE 204
Query: 239 MRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR 298
MR G+ + ++ ++ ++ R H + GL ++ + T+L+++Y K G+
Sbjct: 205 MRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGK 264
Query: 299 LNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTI-REGMEPDHVTFTHLLS 357
+ + +VF EI + D V AM++G A + EA+ F I E + P+ V T +L
Sbjct: 265 VGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILP 324
Query: 358 ACSHSGLVDEGK--HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEP 415
+ GK H + S Y QP + +S ++DL +CG + + + +
Sbjct: 325 VLGDVKALKLGKEVHAHVLKSKNYVEQPFV--HSGLIDLYCKCGDMASGRRVFYGSK-QR 381
Query: 416 NSGVWGALLGA 426
N+ W AL+
Sbjct: 382 NAISWTALMSG 392
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 218/448 (48%), Gaps = 63/448 (14%)
Query: 81 FIGDQLVSCYLNMGATP-DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
F+ + L+ CY ++G TP A L+D++ F+S D + F
Sbjct: 78 FLFNPLLRCY-SLGETPLHAYFLYDQLQRLHFLS------------DHNKSLPPF----- 119
Query: 140 DLDLELNELTFISVISACALAK--AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGF 197
+ T++ ++ A + + + G +H +KLG E V V L+ MY G
Sbjct: 120 ------DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGN 173
Query: 198 VDSAFKLFWAMTEQNMVSWNSMVAVCTQNG------------------------------ 227
+ A K+F M E+N V+WN M+ T G
Sbjct: 174 MIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARV 233
Query: 228 -RPNEAINYFS-MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE-NIT 284
+P EAI FS M+ + + P+E T++++L A L ++ +VH + G +I
Sbjct: 234 DKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIR 293
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISKPDK--VACTAMLSGYAMHGCGTEAIQFFERTIR 342
+ +L++ Y+K G + ++ K F EI K V+ T M+S +A+HG G EA+ F+ R
Sbjct: 294 VTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER 353
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEG-KHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
G++P+ VT +L+ACSH GL +E +F M + Y + P + HY C+VD+L R G L
Sbjct: 354 LGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRL 413
Query: 402 NDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIMLSNIY 461
+A+++ +P E + VW LLGA VY + + + L+ L+ S +Y+++SNI+
Sbjct: 414 EEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIF 473
Query: 462 SASGLWSDAAKVRALMKTKVLARNPGCS 489
+G + DA + R M + +A+ PG S
Sbjct: 474 CGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 199/406 (49%), Gaps = 17/406 (4%)
Query: 215 SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVI 274
S + + ++C + G+ +A+ R G D + + Q C + + VH I
Sbjct: 149 SLDELDSICRE-GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFI 207
Query: 275 FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAI 334
+ +I+ +++ +YS G + + VF + + + ++ +A +G G +AI
Sbjct: 208 TSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAI 267
Query: 335 QFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDL 394
F R +EG +PD F + AC G ++EG +F+ M YG+ P ++HY +V +
Sbjct: 268 DTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKM 327
Query: 395 LGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNY 454
L G L++A +++M EPN +W L+ SRV+ ++ +G + + LD S
Sbjct: 328 LAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDAS----- 380
Query: 455 IMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIH 514
N S +GL K L+K K+ G ++ I D S P++ +++
Sbjct: 381 --RLNKESKAGLV--PVKSSDLVKEKLQRMAKGPNY-----GIRYMAAGDISRPENRELY 431
Query: 515 KKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVII 574
L+ + + E G+V ++ LHDV +E K + H+E+ A L + A + ++
Sbjct: 432 MALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVM 491
Query: 575 KNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
KNLR+C DCH K +S I R +I RDAKRFHH DG+CSC +YW
Sbjct: 492 KNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 153 VISACALAKAREEGQYVH-CCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ 211
+ C A+A +E + VH +G+ + N++I MY G V+ A +F +M E+
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGIS-DISAYNSIIEMYSGCGSVEDALTVFNSMPER 245
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETL 261
N+ +W ++ +NG+ +AI+ FS + G PD + AC L
Sbjct: 246 NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVL 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 58 SSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSL 117
+ +L +V+H + S+ D + ++ Y G+ DA +F+ MP ++ +W +
Sbjct: 194 AQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGV 253
Query: 118 VSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG-QYVHCCAVKL 176
+ F+K G + + FS K + + E+ F + AC + EG + +
Sbjct: 254 IRCFAKNGQGEDAIDTFSRFKQEGNKPDGEM-FKEIFFACGVLGDMNEGLLHFESMYKEY 312
Query: 177 GMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNG------RPN 230
G+ ++ +L+ M + G++D A + +M E N+ W +++ + +G R
Sbjct: 313 GIIPCMEHYVSLVKMLAEPGYLDEALRFVESM-EPNVDLWETLMNLSRVHGDLILGDRCQ 371
Query: 231 EAINYFSMMRLN-----GLFP 246
+ + RLN GL P
Sbjct: 372 DMVEQLDASRLNKESKAGLVP 392
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 204/436 (46%), Gaps = 46/436 (10%)
Query: 55 LKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSW 114
L++ S+ + IH ++IK D + QL+S + G T A L+F+++ + +W
Sbjct: 27 LRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTW 86
Query: 115 NSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAV 174
N ++ S + +F +M + ++ TF VI AC + + G VH A+
Sbjct: 87 NLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAI 146
Query: 175 KLGMELQVKVVNTLINMYGKFGFVDSAFKLF----------WA----------------- 207
K G V NTL+++Y K G DS K+F W
Sbjct: 147 KAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEI 206
Query: 208 ----MTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHL 263
M +N+VSW +M+ +N RP+EA F M+++ + P+E T+V+LLQA L
Sbjct: 207 VFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGS 266
Query: 264 RRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSG 323
+ VH G + + T L+++YSK G L + KVF + +M++
Sbjct: 267 LSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITS 326
Query: 324 YAMHGCGTEAIQFFERTIREG-MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQ 382
+HGCG EA+ FE E +EPD +TF +LSAC+++G V +G YF M VYG+
Sbjct: 327 LGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGIS 386
Query: 383 PRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAEN 442
P +H +CM+ LL + + A L+++M +P+ N S G E +
Sbjct: 387 PIREHNACMIQLLEQALEVEKASNLVESMDSDPD--------------FNSSFGNEYTDG 432
Query: 443 LIALDPSDPRNYIMLS 458
+ + + ++ IM +
Sbjct: 433 MNETNETPSQHQIMFT 448
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + + LL A SL R +H K+ D F+G L+ Y G+ DA+ +
Sbjct: 249 PNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKV 308
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD M K +WNS+++ G +S+F M+ + +E + +TF+ V+SACA
Sbjct: 309 FDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGN 368
Query: 163 REEG 166
++G
Sbjct: 369 VKDG 372
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 190/404 (47%), Gaps = 25/404 (6%)
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQAC---ETLHLRRLV-EAVHGVIFT 276
++C Q G EA+ + G D ++ L + C E L R+V E + ++
Sbjct: 93 SLCIQ-GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSP 151
Query: 277 CGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQF 336
C ++ ++ +YS ++ + KVF E+ + + M+ + +G G EAI
Sbjct: 152 C----DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDL 207
Query: 337 FERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLG 396
F R EG +P+ F + S C+ +G V EG FQ M YG+ P ++HY + +L
Sbjct: 208 FTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLA 267
Query: 397 RCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRNYIM 456
G L++A ++ MP EP+ VW L+ SRV+ ++ +G AE + LD +
Sbjct: 268 TSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDAT------R 321
Query: 457 LSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKK 516
L + SA + A K +K + R+ + F D SHP + I++
Sbjct: 322 LDKVSSAGLV---ATKASDFVKKEPSTRSEPYFY-------STFRPVDSSHPQMNIIYET 371
Query: 517 LEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPLVIIKN 576
L + S+++E G+V +T + + + E+IA+ LL S + ++ N
Sbjct: 372 LMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTN 431
Query: 577 LRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+RI DCH K +S+I R +I RDAK +H F +G+C C + W
Sbjct: 432 IRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 187/360 (51%), Gaps = 4/360 (1%)
Query: 65 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKR 124
R +H ++K + + + LV Y G A FD M KD +SW +++S S++
Sbjct: 204 RQVHGNMVK-VGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRK 262
Query: 125 GDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKV 184
G + +F M + L NE T S++ AC+ KA G+ VH VK ++ V V
Sbjct: 263 GHGIKAIGMFIGMLNHWFLP-NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFV 321
Query: 185 VNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
+L++MY K G + K+F M+ +N V+W S++A + G EAI+ F +M+ L
Sbjct: 322 GTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHL 381
Query: 245 FPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCK 304
+ T+VS+L+AC ++ L + +H I +++N+ I +TL+ LY K G +
Sbjct: 382 IANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFN 441
Query: 305 VFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
V ++ D V+ TAM+SG + G +EA+ F + I+EG+EP+ T++ L AC++S
Sbjct: 442 VLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSES 501
Query: 365 VDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
+ G+ + + + S ++ + +CG +++A + +MP E N W A++
Sbjct: 502 LLIGRSIHSIAKKNHALSNVFVG-SALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMI 559
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 188/359 (52%), Gaps = 4/359 (1%)
Query: 55 LKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSW 114
L+SS+ + + IHA +K D + + G+ L+S + +G A+ +FD MP K+ V+W
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTW 151
Query: 115 NSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAV 174
+++ G+ K G ++F NE F+ +++ C+ E G+ VH V
Sbjct: 152 TAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMV 211
Query: 175 KLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAIN 234
K+G+ + V ++L+ Y + G + SA + F M E++++SW ++++ C++ G +AI
Sbjct: 212 KVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIG 270
Query: 235 YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
F M + P+E T+ S+L+AC R VH ++ + ++ + T+L+++Y+
Sbjct: 271 MFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYA 330
Query: 295 KIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTH 354
K G ++ KVF +S + V T++++ +A G G EAI F R + +++T
Sbjct: 331 KCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVS 390
Query: 355 LLSACSHSGLVDEGKH-YFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP 412
+L AC G + GK + Q++ + ++ + S +V L +CG DA +++ +P
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKN--SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 164/317 (51%), Gaps = 1/317 (0%)
Query: 43 PRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLL 102
P + V ++L A +L R +H+ V+K + D F+G L+ Y G D + +
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
FD M N++ V+W S+++ ++ G +S+F +MK L N LT +S++ AC A
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRR-HLIANNLTVVSILRACGSVGA 400
Query: 163 REEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAV 222
G+ +H +K +E V + +TL+ +Y K G AF + + +++VSW +M++
Sbjct: 401 LLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG 460
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
C+ G +EA+++ M G+ P+ T S L+AC + ++H + N
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSN 520
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
+ + + L+++Y+K G ++ + +VF + + + V+ AM+ GYA +G EA++ R
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEA 580
Query: 343 EGMEPDHVTFTHLLSAC 359
EG E D F +LS C
Sbjct: 581 EGFEVDDYIFATILSTC 597
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 116/222 (52%), Gaps = 1/222 (0%)
Query: 48 VSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMP 107
V ++L A S +L + +HA++IK+ ++ +IG LV Y G + DA + ++P
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 108 NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQ 167
++D VSW +++SG S G + M + +E N T+ S + ACA +++ G+
Sbjct: 448 SRDVVSWTAMISGCSSLGHESEALDFLKEMIQE-GVEPNPFTYSSALKACANSESLLIGR 506
Query: 168 YVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNG 227
+H A K V V + LI+MY K GFV AF++F +M E+N+VSW +M+ +NG
Sbjct: 507 SIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNG 566
Query: 228 RPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA 269
EA+ M G D+ ++L C + L VE+
Sbjct: 567 FCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDEAVES 608
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 207/435 (47%), Gaps = 45/435 (10%)
Query: 67 IHARVIK-SLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRG 125
IH++++K L+ + +G+ L+ Y G DA L+F M KD VSWN++V+ S+ G
Sbjct: 178 IHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNG 237
Query: 126 DLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVV 185
L + F M + + NEL
Sbjct: 238 KLELGLWFFHQMPNPDTVTYNEL------------------------------------- 260
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
I+ + K G ++AF++ M N SWN+++ + + EA +F+ M +G+
Sbjct: 261 ---IDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVR 317
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
DE ++ +L A L + +H GLD + + + L+++YSK G L + +
Sbjct: 318 FDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELM 377
Query: 306 FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG-MEPDHVTFTHLLSACSHSGL 364
F + + + + M+SGYA +G EAI+ F + +E ++PD TF +LL+ CSH +
Sbjct: 378 FWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEV 437
Query: 365 VDEGK-HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGAL 423
E YF++M + Y ++P ++H ++ +G+ G + AK++I+ F + W AL
Sbjct: 438 PMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRAL 497
Query: 424 LGASRVYHNISIGKEAAENLIALDPSDPRN--YIMLSNIYSASGLWSDAAKVRALMKTKV 481
LGA ++ K A +I L +D YI++SN+Y+ W + ++R +M+
Sbjct: 498 LGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESG 557
Query: 482 LARNPGCSFIEHGNK 496
+ + G S+I+ K
Sbjct: 558 VLKEVGSSWIDSRTK 572
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 172/395 (43%), Gaps = 74/395 (18%)
Query: 46 PLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDE 105
PLV L V+ + + CR +H V K + + + L+ Y + DA +FDE
Sbjct: 57 PLVHLLRVS-GNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDE 115
Query: 106 MPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 165
MP+ D +SWNSLVSG+ + G + +F + D+ NE +F + ++ACA
Sbjct: 116 MPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRS-DVFPNEFSFTAALAACARLHLSPL 174
Query: 166 GQYVHCCAVKLGMEL-QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCT 224
G +H VKLG+E V V N LI+MYGK GF+D A +F M E++ VSWN++VA C+
Sbjct: 175 GACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCS 234
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENIT 284
+NG+ + +F M PD T L+ A
Sbjct: 235 RNGKLELGLWFFHQMP----NPDTVTYNELIDA--------------------------- 263
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
+ K G N + +V +++ P+ + +L+GY EA +FF + G
Sbjct: 264 --------FVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSG 315
Query: 345 MEPDHVTFT---------------HLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS 389
+ D + + L+ AC+H G+ R+ S
Sbjct: 316 VRFDEYSLSIVLAAVAALAVVPWGSLIHACAHK----------------LGLDSRVVVAS 359
Query: 390 CMVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALL 424
++D+ +CG+L A+ + MP N VW ++
Sbjct: 360 ALIDMYSKCGMLKHAELMFWTMP-RKNLIVWNEMI 393
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 132/273 (48%), Gaps = 22/273 (8%)
Query: 113 SWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCC 172
SW+++V ++ G +G V+++ ++L +N+ L + YV C
Sbjct: 23 SWSTIVPALARFGSIG-------VLRAAVEL-INDGEKPDASPLVHLLRVSGNYGYVSLC 74
Query: 173 ------AVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQN 226
K G ++ N+L+ Y ++ A K+F M + +++SWNS+V+ Q+
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDE-NITI 285
GR E I F + + +FP+E + + L AC LHL L +H + GL++ N+ +
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
L+++Y K G ++ + VF + + D V+ A+++ + +G + FF +
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP---- 250
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV 378
PD VT+ L+ A SG + FQV+SD+
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNA---FQVLSDM 280
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 177/343 (51%), Gaps = 40/343 (11%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
+++ + + +A+ FD MP K VSWN+++SG+++ G + + +F+ M L +
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLR-LGVRP 262
Query: 146 NELTFISVISACA----------LAKAREEGQYVHCCAVK-------------------- 175
NE T++ VISAC+ L K +E + C VK
Sbjct: 263 NETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIF 322
Query: 176 --LGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAI 233
LG + + N +I+ Y + G + SA +LF M ++N+VSWNS++A NG+ AI
Sbjct: 323 NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAI 382
Query: 234 NYFS-MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNL 292
+F M+ PDE TM+S+L AC + L + + I + N + +L+ +
Sbjct: 383 EFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFM 442
Query: 293 YSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTF 352
Y++ G L + +VF E+ + D V+ + + +A +G G E + + EG+EPD VT+
Sbjct: 443 YARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTY 502
Query: 353 THLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
T +L+AC+ +GL+ EG+ F+ + + P DHY+CM DLL
Sbjct: 503 TSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 159/370 (42%), Gaps = 78/370 (21%)
Query: 77 YRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSV 136
++D ++ + ++ Y+ + A+ +FD++ + WN ++SG+ K G+ +F +
Sbjct: 133 FKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDM 192
Query: 137 MKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFG 196
M E V +I + K
Sbjct: 193 MP----------------------------------------ENDVVSWTVMITGFAKVK 212
Query: 197 FVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
+++A K F M E+++VSWN+M++ QNG +A+ F+ M G+ P+E T V ++
Sbjct: 213 DLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVIS 272
Query: 257 ACE-------------------------------TLHLR-RLVEAVHGVIFTCGLDENIT 284
AC +H + R +++ + G N+
Sbjct: 273 ACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLV 332
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
+++ Y++IG ++++ ++F + K + V+ ++++GYA +G AI+FFE I G
Sbjct: 333 TWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYG 392
Query: 345 -MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH--YSCMVDLLGRCGLL 401
+PD VT +LSAC H ++ G ++ + Q +L+ Y ++ + R G L
Sbjct: 393 DSKPDEVTMISVLSACGHMADLELGDC---IVDYIRKNQIKLNDSGYRSLIFMYARGGNL 449
Query: 402 NDAKELIKNM 411
+AK + M
Sbjct: 450 WEAKRVFDEM 459
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 175/437 (40%), Gaps = 82/437 (18%)
Query: 67 IHARVI--KSLDYRDGFIGDQLVSCYLNMGA-TPDAQLLFDEMPNKDFVSWNSLVSGFSK 123
IHA++I SL R + +++SC + A + +L+FD + + NS+ FSK
Sbjct: 25 IHAQLIVFNSLP-RQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSK 83
Query: 124 RGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVK 183
D+ N + +S + + +F VI + A G KLG
Sbjct: 84 M-DMANDVLRLYEQRSRCGIMPDAFSFPVVIKS-----AGRFGILFQALVEKLGFFKDPY 137
Query: 184 VVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNG 243
V N +++MY K V+SA K+F ++++ WN M++ + G EA F MM N
Sbjct: 138 VRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN- 196
Query: 244 LFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
++ T ++ ++K+ L +
Sbjct: 197 --------------------------------------DVVSWTVMITGFAKVKDLENAR 218
Query: 304 KVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
K F + + V+ AMLSGYA +G +A++ F +R G+ P+ T+ ++SACS
Sbjct: 219 KYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRA 278
Query: 364 ----------LVDEGK------------------HYFQVMSDVY---GVQPRLDHYSCMV 392
L+DE + Q ++ G Q L ++ M+
Sbjct: 279 DPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMI 338
Query: 393 DLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPR 452
R G ++ A++L MP + N W +L+ ++ E E++I S P
Sbjct: 339 SGYTRIGDMSSARQLFDTMP-KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPD 397
Query: 453 NYIMLSNIYSASGLWSD 469
M+S + SA G +D
Sbjct: 398 EVTMIS-VLSACGHMAD 413
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 188/409 (45%), Gaps = 20/409 (4%)
Query: 214 VSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGV 273
V+ + A+C Q + EA+ ++ G D ++ L + C + VH
Sbjct: 79 VTIETFDALCKQ-VKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDC 137
Query: 274 IFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEA 333
I LD T++ +YS + + VF E+ K + M+ A +G G A
Sbjct: 138 I--TPLDARS--YHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERA 193
Query: 334 IQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVD 393
I F R I EG +PD F + AC G ++EG +F+ M YG+ ++ Y +++
Sbjct: 194 IDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIE 253
Query: 394 LLGRCGLLNDAKELIKNMPFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPRN 453
+L CG L++A + ++ M EP+ +W L+ V + +G AE + LD S
Sbjct: 254 MLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSK 313
Query: 454 YIMLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSFIEHGNK--IHRFVVDDYSHPDSD 511
S +GL + A A+ K K L C I K +H F D SH +
Sbjct: 314 E-------SNAGLVAAKASDSAMEKLKELRY---CQMIRDDPKKRMHEFRAGDTSHLGTV 363
Query: 512 KIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAADMPL 571
+ L+ M I GFV T V EE K + S K+A A+ ++ S A PL
Sbjct: 364 SAFRSLKVQMLDI---GFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPL 420
Query: 572 VIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+++N+R C D H T K +SLI R +I RD K++H + +G+CSC DYW
Sbjct: 421 TVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 77/112 (68%)
Query: 509 DSDKIHKKLEEVMSKIQEFGFVSETESILHDVAEEIKTNMVNKHSEKIALAYGLLVSAAD 568
D K + KL+ + ++++ G+V ET+ +LHD+ EE K + HSE++A+A+G++ +
Sbjct: 128 DRSKAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPG 187
Query: 569 MPLVIIKNLRICRDCHKTAKFVSLIEKRTIIIRDAKRFHHFSDGLCSCGDYW 620
+ ++KNLRIC DCH K +S IE R II+RD KRFHHF DG CSCGDYW
Sbjct: 188 TTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 162/340 (47%), Gaps = 23/340 (6%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS----ACALAKAREE 165
D +S++++V+G+ + G+L + VMK L+ N + S+I C LA+A E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM----VSWNSMVA 221
+ ++ G+ V TLI+ + K G + +A K F+ M +++ +++ ++++
Sbjct: 339 FSEM----IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLD 280
Q G EA F M GL PD T L+ C+ H++ VH + G
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR-VHNHMIQAGCS 453
Query: 281 ENITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQF 336
N+ TTL++ K G L+++ ++ E+ K P+ ++++G G EA++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 337 FERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLG 396
G+ D VT+T L+ A SG +D+ + + M G+QP + ++ +++
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFC 572
Query: 397 RCGLLNDAKELIKNM---PFEPNSGVWGALLGASRVYHNI 433
G+L D ++L+ M PN+ + +L+ + +N+
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 142/344 (41%), Gaps = 61/344 (17%)
Query: 157 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----N 212
C L + +E + +K G V +T++N Y +FG +D +KL M + N
Sbjct: 257 CQLGRIKEAHHLLLLMELK-GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
+ S++ + + + EA FS M G+ PD
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD------------------------- 350
Query: 273 VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHG 328
+ TTL++ + K G + A+ K F E+ PD + TA++SG+ G
Sbjct: 351 ----------TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 329 CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVY--GVQPRLD 386
EA + F +G+EPD VTFT L++ +G + K F+V + + G P +
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM---KDAFRVHNHMIQAGCSPNVV 457
Query: 387 HYSCMVDLLGRCGLLNDAKELIKNM---PFEPNSGVWGALLGASRVYHNIS-----IGKE 438
Y+ ++D L + G L+ A EL+ M +PN + +++ NI +G+
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 439 AAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVL 482
A L A D Y L + Y SG A ++ M K L
Sbjct: 518 EAAGLNA----DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 152/369 (41%), Gaps = 21/369 (5%)
Query: 64 CRVIHARVIKSLDYRDGFIGDQ-----LVSCYLNMGATPDAQLLFDEMPNKDF----VSW 114
C++ A S R G + D L+ + G A F EM ++D +++
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 115 NSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAV 174
+++SGF + GD+ +F M LE + +TF +I+ A ++ VH +
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 175 KLGMELQVKVVNTLINMYGKFGFVDSAFKLF---WAMTEQ-NMVSWNSMVAVCTQNGRPN 230
+ G V TLI+ K G +DSA +L W + Q N+ ++NS+V ++G
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 231 EAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTL 289
EA+ GL D T +L+ A C++ + + E + ++ GL I L
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVL 567
Query: 290 LNLYSKIGRLNASCKV----FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
+N + G L K+ A+ P+ +++ Y + A ++ G+
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
PD T+ +L+ + + E FQ M G + YS ++ + +A+
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKG-KGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 406 ELIKNMPFE 414
E+ M E
Sbjct: 687 EVFDQMRRE 695
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 162/340 (47%), Gaps = 23/340 (6%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS----ACALAKAREE 165
D +S++++V+G+ + G+L + VMK L+ N + S+I C LA+A E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 166 GQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM----VSWNSMVA 221
+ ++ G+ V TLI+ + K G + +A K F+ M +++ +++ ++++
Sbjct: 339 FSEM----IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 222 VCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLD 280
Q G EA F M GL PD T L+ C+ H++ VH + G
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR-VHNHMIQAGCS 453
Query: 281 ENITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQF 336
N+ TTL++ K G L+++ ++ E+ K P+ ++++G G EA++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 337 FERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLG 396
G+ D VT+T L+ A SG +D+ + + M G+QP + ++ +++
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFC 572
Query: 397 RCGLLNDAKELIKNM---PFEPNSGVWGALLGASRVYHNI 433
G+L D ++L+ M PN+ + +L+ + +N+
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 142/344 (41%), Gaps = 61/344 (17%)
Query: 157 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----N 212
C L + +E + +K G V +T++N Y +FG +D +KL M + N
Sbjct: 257 CQLGRIKEAHHLLLLMELK-GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 213 MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
+ S++ + + + EA FS M G+ PD
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD------------------------- 350
Query: 273 VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHG 328
+ TTL++ + K G + A+ K F E+ PD + TA++SG+ G
Sbjct: 351 ----------TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 329 CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVY--GVQPRLD 386
EA + F +G+EPD VTFT L++ +G + K F+V + + G P +
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM---KDAFRVHNHMIQAGCSPNVV 457
Query: 387 HYSCMVDLLGRCGLLNDAKELIKNM---PFEPNSGVWGALLGASRVYHNIS-----IGKE 438
Y+ ++D L + G L+ A EL+ M +PN + +++ NI +G+
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 439 AAENLIALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKVL 482
A L A D Y L + Y SG A ++ M K L
Sbjct: 518 EAAGLNA----DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 152/369 (41%), Gaps = 21/369 (5%)
Query: 64 CRVIHARVIKSLDYRDGFIGDQ-----LVSCYLNMGATPDAQLLFDEMPNKDF----VSW 114
C++ A S R G + D L+ + G A F EM ++D +++
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 115 NSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAV 174
+++SGF + GD+ +F M LE + +TF +I+ A ++ VH +
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 175 KLGMELQVKVVNTLINMYGKFGFVDSAFKLF---WAMTEQ-NMVSWNSMVAVCTQNGRPN 230
+ G V TLI+ K G +DSA +L W + Q N+ ++NS+V ++G
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 231 EAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTL 289
EA+ GL D T +L+ A C++ + + E + ++ GL I L
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVL 567
Query: 290 LNLYSKIGRLNASCKV----FAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
+N + G L K+ A+ P+ +++ Y + A ++ G+
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
PD T+ +L+ + + E FQ M G + YS ++ + +A+
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKG-KGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 406 ELIKNMPFE 414
E+ M E
Sbjct: 687 EVFDQMRRE 695
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 149/375 (39%), Gaps = 53/375 (14%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD------------------LDLELNEL--- 148
D S+ SL+S F+ G ++VF M+ D + N++
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 149 --------------TFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK 194
T+ ++I+ C +E V G N L+++YGK
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 195 FGFVDSAFKLFWAMT----EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
A K+ M ++V++NS+++ ++G +EA+ + M G PD T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 251 MVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
+LL E ++ + G NI + +Y G+ K+F EI+
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 311 ----KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
PD V +L+ + +G +E F+ R G P+ TF L+SA S G +
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 367 EGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPF---EPNSGVWGAL 423
+ ++ M D GV P L Y+ ++ L R G+ +++++ M +PN + +L
Sbjct: 507 QAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 424 LGASRVYHNISIGKE 438
L H + GKE
Sbjct: 566 L------HAYANGKE 574
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 142/325 (43%), Gaps = 15/325 (4%)
Query: 112 VSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHC 171
V++NSL+S +++ G L M + + M ++ + + T+ +++S A E +
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 172 CAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT----EQNMVSWNSMVAVCTQNG 227
G + + N I MYG G K+F + ++V+WN+++AV QNG
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 228 RPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVT 287
+E F M+ G P+ T +L+ A V+ + G+ +++
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 288 TLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTEAIQFFERTIRE 343
T+L ++ G S KV AE+ KP+++ ++L YA +G + +
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYS 587
Query: 344 G-MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLN 402
G +EP V L+ CS L+ E + F + + G P + + MV + GR ++
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE-RGFSPDITTLNSMVSIYGRRQMVA 646
Query: 403 DAK---ELIKNMPFEPNSGVWGALL 424
A + +K F P+ + +L+
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLM 671
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 13/261 (4%)
Query: 177 GMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRP-NE 231
G L V +LI+ + G A +F M E ++++N ++ V + G P N+
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 232 AINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLN 291
+ M+ +G+ PD T +L+ C+ L + V + G + LL+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 292 LYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
+Y K R + KV E+ P V +++S YA G EA++ + +G +P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 348 DHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL 407
D T+T LLS +G V+ F+ M + G +P + ++ + + G G + ++
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 408 IKNM---PFEPNSGVWGALLG 425
+ P+ W LL
Sbjct: 442 FDEINVCGLSPDIVTWNTLLA 462
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 151/378 (39%), Gaps = 55/378 (14%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMP----NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
+ + Y N G + +FDE+ + D V+WN+L++ F + G VF MK
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ E TF ++ISA + + E+ V+ + G+ + NT++ + G +
Sbjct: 483 AGFVPERE-TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 200 SAFKLFWAMT---------------------------------------EQNMVSWNSMV 220
+ K+ M E V ++V
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC--- 277
VC++ EA FS ++ G PD T+ S++ R++V +GV+
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS---IYGRRQMVAKANGVLDYMKER 658
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEI----SKPDKVACTAMLSGYAMHGCGTEA 333
G ++ +L+ ++S+ S ++ EI KPD ++ ++ Y + +A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 334 IQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVD 393
+ F G+ PD +T+ + + + + +E + M +G +P + Y+ +VD
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVD 777
Query: 394 LLGRCGLLNDAKELIKNM 411
+ ++AK ++++
Sbjct: 778 GYCKLNRKDEAKLFVEDL 795
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 158/335 (47%), Gaps = 32/335 (9%)
Query: 113 SWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA--------LAKARE 164
++++L+S + + G +SVF+ MK + L N +T+ +VI AC +AK +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMK-EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD 328
Query: 165 EGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT----EQNMVSWNSMV 220
E Q + G++ N+L+ + + G ++A LF MT EQ++ S+N+++
Sbjct: 329 EMQ-------RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVH--GVIFTCG 278
+ G+ + A + M + + P+ + +++ R EA++ G + G
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG--RFDEALNLFGEMRYLG 439
Query: 279 LDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTEAI 334
+ + TLL++Y+K+GR + + E++ K D V A+L GY G E
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 335 QFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDL 394
+ F RE + P+ +T++ L+ S GL E F+ G++ + YS ++D
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA-GLRADVVLYSALIDA 558
Query: 395 LGRCGLLNDAKELIKNMPFE---PNSGVWGALLGA 426
L + GL+ A LI M E PN + +++ A
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 146/343 (42%), Gaps = 67/343 (19%)
Query: 86 LVSCYLNMGATPDAQLLFDEM------PNKDFVSWNSLVSGFSKRG-DLGNCMSVFSVMK 138
L+S Y G +A +F+ M PN V++N+++ K G + F M+
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPN--LVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 139 SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFV 198
+ ++ + +TF S+++ C+ E + + +E V NTL++ K G +
Sbjct: 332 RN-GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 199 DSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSL 254
D AF++ M + N+VS+++++ + GR +EA+N F MR G+ D + +L
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 255 L-------QACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFA 307
L ++ E L + R + +V G+ +++ LL Y K G+ + KVF
Sbjct: 451 LSIYTKVGRSEEALDILREMASV-------GIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 308 EISK----PDKVACTAMLSGYAMHGCGTEAIQFF-------------------------- 337
E+ + P+ + + ++ GY+ G EA++ F
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Query: 338 ---------ERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHY 371
+ +EG+ P+ VT+ ++ A S +D Y
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 275 FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCG 330
F G + + L++ Y + G + VF + +P+ V A++ G
Sbjct: 260 FAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME 319
Query: 331 TEAI-QFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS 389
+ + +FF+ R G++PD +TF LL+ CS GL + ++ F M++ ++ + Y+
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR-IEQDVFSYN 378
Query: 390 CMVDLLGRCGLLNDAKELIKNMPFE---PN----SGVWGALLGASRVYHNISIGKEAAEN 442
++D + + G ++ A E++ MP + PN S V A R +++ E
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 443 LIALDPSDPRNYIMLSNIYSASGLWSDA 470
IALD +Y L +IY+ G +A
Sbjct: 439 GIALDRV---SYNTLLSIYTKVGRSEEA 463
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 164/376 (43%), Gaps = 13/376 (3%)
Query: 49 STLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPN 108
+TL+ AL + + ++V K+ D + + +++ G A +F++M
Sbjct: 358 TTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKE 417
Query: 109 KD----FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKARE 164
++N+L+ G+ K G L + +M D L+ N+ T ++ A + E
Sbjct: 418 SGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIE 477
Query: 165 EGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWN-----SM 219
E + G++ V NTL Y + G +A + N V N ++
Sbjct: 478 EAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTI 537
Query: 220 VAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGL 279
V + G+ EA+ +F M+ G+ P+ SL++ ++ V V ++ G+
Sbjct: 538 VNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGV 597
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQ 335
++ +TL+N +S +G + +++ ++ + PD A + + GYA G +A Q
Sbjct: 598 KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQ 657
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
+ + G+ P+ V +T ++S +G + + ++ M + G+ P L Y ++
Sbjct: 658 ILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGF 717
Query: 396 GRCGLLNDAKELIKNM 411
G A+EL+K+M
Sbjct: 718 GEAKQPWKAEELLKDM 733
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 8/190 (4%)
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENI 283
+ GRP EA + F+ + G P T +L+ A H L+ + V GL +
Sbjct: 331 ERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKV-EKNGLKPDT 389
Query: 284 TIVTTLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTEAIQFFER 339
+ ++N S+ G L+ + K+F ++ KP ++ GY G E+ + +
Sbjct: 390 ILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDM 449
Query: 340 TIREGM-EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC 398
+R+ M +P+ T L+ A + ++E + M YGV+P + ++ + R
Sbjct: 450 MLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS-YGVKPDVVTFNTLAKAYARI 508
Query: 399 GLLNDAKELI 408
G A+++I
Sbjct: 509 GSTCTAEDMI 518
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 132/305 (43%), Gaps = 44/305 (14%)
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFG------------- 196
++S++ ALAK + ++V K + V N LI +GK G
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 197 ----------------------FVDSAFKLFWAMT----EQNMVSWNSMVAVCTQNGRPN 230
FVDSA ++F M + ++V++N+M+ + G+
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 231 EAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLL 290
+A+ M G D+ T ++++QAC A++ + G+ + ++
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 291 NLYSKIGRLNASCKVFAEI----SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGME 346
K G+LN VF + SKP+ T ++ GYA G +AI+ R I EG +
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 347 PDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKE 406
PD VT++ +++ +G V+E YF G+ YS ++D LG+ G +++A+
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTCR-FDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 407 LIKNM 411
L + M
Sbjct: 454 LFEEM 458
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 124/295 (42%), Gaps = 14/295 (4%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
+ ++ Y G T A +M + D +++ +++ D G+C++++ M
Sbjct: 261 NTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM-D 319
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ +++ F VI EG V ++ G + V + LI+ Y K G V+
Sbjct: 320 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 379
Query: 200 SAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
A +L M ++ ++V+++ +V +NGR EA++YF R +GL + SL+
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLI 439
Query: 256 QACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDK- 314
E + + G + L++ ++K +++ + +F + + +
Sbjct: 440 DGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGC 499
Query: 315 ----VACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
T +LSG EA++ ++ I +G+ P F L + SG V
Sbjct: 500 DQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKV 554
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 165/368 (44%), Gaps = 31/368 (8%)
Query: 80 GFIGDQLVSCYL-----NMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF 134
GF D + YL +G A+ LF +P + V +N+L+ GF G L + +V
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 135 SVMKSDLDLELNELTFISVISACALAKAREEG------QYVHCCAVKLGMELQVKVVNTL 188
S M + + + T+ S+I +EG + +H K G + V L
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYG-----YWKEGLVGLALEVLHDMRNK-GCKPNVYSYTIL 430
Query: 189 INMYGKFGFVDSAFKLFWAMT----EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
++ + K G +D A+ + M+ + N V +N +++ + R EA+ F M G
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 245 FPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
PD T SL+ CE ++ + + +I + G+ N TL+N + + G + +
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMI-SEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 304 KVFAEI----SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSAC 359
K+ E+ S D++ +++ G G +A FE+ +R+G P +++ L++
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Query: 360 SHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFE---PN 416
SG+V+E FQ + G P + ++ +++ L R G + D + + + E P+
Sbjct: 610 CRSGMVEEAVE-FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 417 SGVWGALL 424
+ + L+
Sbjct: 669 TVTFNTLM 676
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 14/253 (5%)
Query: 198 VDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVS 253
+DSA L MT+ N V + +++ ++ R NEA+ M L G PD T
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 254 -LLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKP 312
+L C+ + + V+ ++ ++IT L+N KIGR++A+ +F I KP
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDIT-YGYLMNGLCKIGRVDAAKDLFYRIPKP 351
Query: 313 DKVACTAMLSGYAMHGCGTEAIQFFERTIRE-GMEPDHVTFTHLLSACSHSGLVDEGKHY 371
+ V ++ G+ HG +A + G+ PD T+ L+ GLV
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 372 FQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP---FEPNSGVWGALLGASR 428
M + G +P + Y+ +VD + G +++A ++ M +PN+ + L+ A
Sbjct: 412 LHDMRN-KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 429 VYHNISIGKEAAE 441
H I EA E
Sbjct: 471 KEHRIP---EAVE 480
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 19/301 (6%)
Query: 86 LVSCYLNMGATPDAQLLFDEM------PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
LV + +G +A + +EM PN V +N L+S F K + + +F M
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNT--VGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ + TF S+IS + ++ + G+ NTLIN + + G +
Sbjct: 488 K-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 200 SAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
A KL M Q + +++NS++ + G ++A + F M +G P + L+
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 256 QA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF----AEIS 310
C + + VE ++ G +I +L+N + GR+ +F AE
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLR-GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 311 KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKH 370
PD V ++S G +A + I +G P+H T++ LL + +D +
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRF 725
Query: 371 Y 371
Y
Sbjct: 726 Y 726
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 132/297 (44%), Gaps = 13/297 (4%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDF----VSWNSLVSGFSKRGDLGNCMSVF 134
D F ++S G +A+ F E+ + + V++N+L+ F K G +SV
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 135 SVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK 194
M+ + + +T+ +++A A +E V K G+ T+I+ YGK
Sbjct: 340 KEMEEN-SCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGK 398
Query: 195 FGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
G D A KLF++M E N ++N+++++ + R NE I M+ NG P+ AT
Sbjct: 399 AGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRAT 458
Query: 251 MVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
++L C + + V V + +CG + + TL++ Y + G + K++ E++
Sbjct: 459 WNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMT 518
Query: 311 KPDKVAC----TAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
+ AC A+L+ A G +G +P +++ +L + G
Sbjct: 519 RAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 13/258 (5%)
Query: 180 LQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRP-NEAIN 234
L V+ T+++ Y + G + A LF M E +V++N ++ V + GR + +
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 235 YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
MR GL DE T ++L AC L R + + +CG + LL ++
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 295 KIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHV 350
K G + V E+ + D V +++ Y G EA E ++G+ P+ +
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 351 TFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKN 410
T+T ++ A +G DE F M + G P Y+ ++ LLG+ N+ +++ +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 411 MPFE---PNSGVWGALLG 425
M PN W +L
Sbjct: 447 MKSNGCSPNRATWNTMLA 464
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 151/384 (39%), Gaps = 40/384 (10%)
Query: 86 LVSCYLNMGATPDAQLLFDEM----PNKDFVSWNSLVSGFSKRG-DLGNCMSVFSVMKSD 140
++ Y G A LF+ M P+ V++N ++ F K G + V M+S
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 141 LDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
L+ +E T +V+SACA E + G E N L+ ++GK G
Sbjct: 276 -GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 201 AFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
A + M E + V++N +VA + G EA MM G+ P+ T +++
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 257 ACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KP 312
A + + G N +L+L K R N K+ ++ P
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 313 DKVACTAMLSGYAMHGCGTEAI-QFFERTIRE----GMEPDHVTFTHLLSACSHSGL-VD 366
++ ML+ CG + + +F R RE G EPD TF L+SA G VD
Sbjct: 455 NRATWNTMLA-----LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVD 509
Query: 367 EGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP---FEPNSGVW--- 420
K Y ++ G + Y+ +++ L R G + +I +M F+P +
Sbjct: 510 ASKMYGEMTRA--GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 421 -------GALLGASRVYHNISIGK 437
G LG R+ + I G+
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQ 591
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 136/343 (39%), Gaps = 24/343 (6%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNKDFV----SWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
++ Y G +A LF M V ++N+++S K+ + + MKS+
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN- 450
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
N T+ ++++ C + V G E NTLI+ YG+ G A
Sbjct: 451 GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA 510
Query: 202 FKLFWAMTEQN----MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ- 256
K++ MT + ++N+++ + G N S M+ G P E + +LQ
Sbjct: 511 SKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 570
Query: 257 ---ACETLHLRRLVEAV-HGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK- 311
L + R+ + G IF + ++ TLL K L S + F K
Sbjct: 571 YAKGGNYLGIERIENRIKEGQIFPSWM-----LLRTLLLANFKCRALAGSERAFTLFKKH 625
Query: 312 ---PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEG 368
PD V +MLS + + +A E +G+ PD VT+ L+ G +
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 369 KHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
+ + + ++P L Y+ ++ R GL+ +A ++ M
Sbjct: 686 EEILKTLEKSQ-LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 7/271 (2%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF-SVMKSDLD 142
++L+ +++ G + +FD MP++DF SW + G + GD + +F S++K
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 143 LELNELTFI--SVISACALAKAREEGQYVHCCAVKLGM--ELQVKVVNTLINMYGKFGFV 198
++I V+ ACA+ + E G+ VH KLG E + +LI YG+F +
Sbjct: 187 GAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCL 246
Query: 199 DSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQAC 258
+ A + ++ N V+W + V + G E I F M +G+ + + ++L+AC
Sbjct: 247 EDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKAC 306
Query: 259 ETL-HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVAC 317
+ R + VH G + + I L+ +Y K G++ + KVF V+C
Sbjct: 307 SWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSC 366
Query: 318 -TAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
AM++ Y +G EAI+ + G++
Sbjct: 367 WNAMVASYMQNGIYIEAIKLLYQMKATGIKA 397
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Query: 75 LDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF 134
+D D ++ L+ Y DA L+ ++ N + V+W + V+ + G+ + F
Sbjct: 225 IDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDF 284
Query: 135 SVMKSDLDLELNELTFISVISACA-LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYG 193
M + ++ N F +V+ AC+ ++ GQ VH A+KLG E + LI MYG
Sbjct: 285 IEM-GNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYG 343
Query: 194 KFGFVDSAFKLFWAMTEQNMVS-WNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
K+G V A K+F + ++ VS WN+MVA QNG EAI M+ G+
Sbjct: 344 KYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGI 395
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 128/286 (44%), Gaps = 14/286 (4%)
Query: 153 VISACALAKAREEGQY----VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM 208
+ S A ARE Q + +K + + +N L+ M+ G +D ++F M
Sbjct: 90 IYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRM 149
Query: 209 TEQNMVSWNSMVAVCTQNGRPNEAINYF-SMMR--LNGLFPDEATMVS-LLQACETLHLR 264
++ SW + C + G +A F SM++ G F + ++ +L+AC +
Sbjct: 150 PHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDF 209
Query: 265 RLVEAVHGVIFTCGL--DENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLS 322
L + VH + G +E+ + +L+ Y + L + V ++S + VA A ++
Sbjct: 210 ELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVT 269
Query: 323 GYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQ 382
G E I+ F G++ + F+++L ACS + D G+ QV ++ +
Sbjct: 270 NDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS--WVSDGGRSGQQVHANAIKLG 327
Query: 383 PRLD-HYSC-MVDLLGRCGLLNDAKELIKNMPFEPNSGVWGALLGA 426
D C ++++ G+ G + DA+++ K+ E + W A++ +
Sbjct: 328 FESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVAS 373
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 167/387 (43%), Gaps = 18/387 (4%)
Query: 39 ISTYPRDPLVSTLLVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPD 98
+S P +T+L +L S L + R+++ Y D L+
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 99 AQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTF-ISV 153
A L DEM ++ D V++N LV+G K G L + + M S + N +T I +
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS-GCQPNVITHNIIL 316
Query: 154 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ-- 211
S C+ + + + + ++ G V N LIN + G + A + M +
Sbjct: 317 RSMCSTGRWMD-AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 212 --NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVE 268
N +S+N ++ + + + AI Y M G +PD T ++L A C+ + VE
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 269 AVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGY 324
++ + + G + T+++ +K G+ + K+ E+ KPD + ++++ G
Sbjct: 436 ILN-QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 325 AMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPR 384
+ G EAI+FF R G+ P+ VTF ++ S D + M + G +P
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN-RGCKPN 553
Query: 385 LDHYSCMVDLLGRCGLLNDAKELIKNM 411
Y+ +++ L G+ +A EL+ +
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 187 TLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLN 242
TLI + + G A K+ + +++++N M++ + G N A++ M ++
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS 201
Query: 243 GLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNA 301
PD T ++L++ C++ L++ +E + ++ + IT T L+ + +
Sbjct: 202 ---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT-YTILIEATCRDSGVGH 257
Query: 302 SCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLL- 356
+ K+ E+ PD V +++G G EAI+F G +P+ +T +L
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 357 SACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPF--- 413
S CS +D K ++ G P + ++ +++ L R GLL A ++++ MP
Sbjct: 318 SMCSTGRWMDAEKLLADMLRK--GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 414 EPNSGVWGALL 424
+PNS + LL
Sbjct: 376 QPNSLSYNPLL 386
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 180/432 (41%), Gaps = 62/432 (14%)
Query: 71 VIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDF----VSWNSLVSGFSKRGD 126
+++ D F + L++ + M DA + D M +KDF V++N ++ RG
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 127 LGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN 186
L + V + + SD + + +T+ +I A L +E + + G++ + N
Sbjct: 209 LDLALKVLNQLLSD-NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 187 TLINMYGKFGFVDSAF---------------------------------------KLFWA 207
T+I K G VD AF K+F
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 208 MTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRL 266
+ N+V+++ ++ ++G+ EA+N +M+ GL PD + L+ A C L
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 267 VEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLS 322
+E + +I + G +I T+L K G+ + + ++F ++ + P+ + M S
Sbjct: 388 IEFLETMI-SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 323 GYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQ 382
G A+ + G++PD +T+ ++S G+VDE F+++ D+ +
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA---FELLVDMRSCE 503
Query: 383 --PRLDHYSCMVDLLGRCGL--LNDAKELIKNM---PFEPNSGVWGALLGASRVYHNISI 435
P + Y+ + LLG C + DA ++++M PN + L+ +
Sbjct: 504 FHPSVVTYN--IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Query: 436 GKEAAENLIALD 447
E A +L+ +D
Sbjct: 562 AMELANDLVRID 573
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 136/318 (42%), Gaps = 20/318 (6%)
Query: 123 KRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQV 182
K ++ ++F DL ++ T+ +I A E Q V G V
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 183 KVVNTLINMYGKFGFVDSAFKLFWAMT----EQNMVSWNSMVAVCTQNGRPNEAIN-YFS 237
N L++ YGK G +D F+L+ M+ E N ++ N +++ + G ++A++ Y+
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 238 MMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLD----ENITIVTTLLNLY 293
+M P T L+ RL EA +F LD N I L+N +
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSG--RLYEAKQ--LFEGMLDYGCRPNCAIYNILINGF 936
Query: 294 SKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDH 349
K G +A+C +F + K PD + ++ M G E + +F+ G+ PD
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 350 VTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL-- 407
V + +++ S ++E F M G+ P L Y+ ++ LG G++ +A ++
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 408 -IKNMPFEPNSGVWGALL 424
I+ EPN + AL+
Sbjct: 1057 EIQRAGLEPNVFTFNALI 1074
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 127/287 (44%), Gaps = 21/287 (7%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPN----KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
L+ Y G + L+ EM + ++ N ++SG K G++ + + ++ + SD
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
D T+ +I + + E + + + G + N LIN +GK G D+A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 202 FKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA 257
LF M ++ ++ +++ +V GR +E ++YF ++ +GL PD ++
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 258 CETLHLRRLVEAVHGVIF-----TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK- 311
H RL EA+ V+F + G+ ++ +L+ G + + K++ EI +
Sbjct: 1006 LGKSH--RLEEAL--VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 312 ---PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHL 355
P+ A++ GY++ G A ++ + G P+ T+ L
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 149/363 (41%), Gaps = 54/363 (14%)
Query: 113 SWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVH-- 170
+++SL+ G KR D+ + M + M++ L L+ N TF I A E +
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMET-LGLKPNVYTFTICIRVLGRAGKINEAYEILKR 283
Query: 171 --------------------CCAVKLGMELQV------------KVVN-TLINMYGKFGF 197
C A KL +V +V TL++ +
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 198 VDSAFKLFWAMTEQN-----MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMV 252
+DS K FW+ E++ +V++ +V + G EA + +MR G+ P+ T
Sbjct: 344 LDSV-KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 253 SLLQACETLHLRRLVEAVH--GVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
+L+ C L + RL +A+ G + + G+ ++ Y K G ++ + F ++
Sbjct: 403 TLI--CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 311 K----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
P+ VAC A L A G EA Q F G+ PD VT+ ++ S G +D
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 367 EGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL---IKNMPFEPNSGVWGAL 423
E M + G +P + + +++ L + +++A ++ +K M +P + L
Sbjct: 521 EAIKLLSEMME-NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 424 LGA 426
L
Sbjct: 580 LAG 582
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 29/304 (9%)
Query: 194 KFGFVDSAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVS 253
+FGFV +A+ S+N ++ + ++ EA+ + M L G P T S
Sbjct: 181 EFGFVLNAY------------SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSS 228
Query: 254 LLQACETLHLRRLVEAVHGVIF---TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
L+ L RR +++V G++ T GL N+ T + + + G++N + ++ +
Sbjct: 229 LMVG---LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 311 K----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
PD V T ++ A + FE+ +PD VT+ LL S + +D
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 367 EGKHYFQVMSDVYGVQPRLDHYSCMVDLL---GRCGLLNDAKELIKNMPFEPNSGVWGAL 423
K ++ M + G P + ++ +VD L G G D +++++ PN + L
Sbjct: 346 SVKQFWSEM-EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 424 LGASRVYHNISIGKEAAENL--IALDPSDPRNYIMLSNIYSASGLWSDAAKVRALMKTKV 481
+ H + E N+ + + P+ YI+ + Y SG A + MKTK
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPT-AYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 482 LARN 485
+A N
Sbjct: 464 IAPN 467
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 163/398 (40%), Gaps = 64/398 (16%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
+ Y G + A F++M K + V+ N+ + +K G +F +K D+
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK-DI 497
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
L + +T+ ++ + +E + ++ G E V VVN+LIN K VD A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 202 FKLFWAMTEQNM----VSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA 257
+K+F M E + V++N+++A +NG+ EAI F M G P+ T +L
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 258 -CE----TLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK- 311
C+ TL L+ L + + G ++ T++ K G++ + F ++ K
Sbjct: 618 LCKNDEVTLALKMLFK-----MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 672
Query: 312 --PDKVACTAMLSGYA---------------MHGCGTE---------------------A 333
PD V +L G ++ C + A
Sbjct: 673 VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA 732
Query: 334 IQFFERTIREGM--EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCM 391
+ F ER + G+ + D + + +C H+ V + F+ + GVQP+L Y+ +
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYSCKHNN-VSGARTLFEKFTKDLGVQPKLPTYNLL 791
Query: 392 VDLLGRCGLLNDAKEL---IKNMPFEPNSGVWGALLGA 426
+ L ++ A+++ +K+ P+ + LL A
Sbjct: 792 IGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 125/330 (37%), Gaps = 49/330 (14%)
Query: 94 GATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELT 149
G + +FD M + D ++ ++ S +G L M+ + LN +
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR-EFGFVLNAYS 190
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
+ +I ++ E V+ + G ++ ++L+ GK +DS L M
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 210 ----EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRR 265
+ N+ ++ + V + G+ NEA M G PD T L+ A T
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTAR--- 307
Query: 266 LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAML 321
+L+ + +VF ++ KPD+V +L
Sbjct: 308 --------------------------------KLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 322 SGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGV 381
++ + QF+ ++G PD VTFT L+ A +G E VM D G+
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD-QGI 394
Query: 382 QPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
P L Y+ ++ L R L+DA EL NM
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNM 424
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 12/275 (4%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA-CALAKAREEGQY 168
D V++N+L+ GF K +L +F +KS + +T+ S+IS C K RE
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 169 VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE----QNMVSWNSMVAVCT 224
+ ++LG+ N L++ Y K G + +A ++ M ++V++ S++
Sbjct: 300 LDD-MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENI 283
+ G+ ++ + M G+FP+ T L+ A C L + E + G + + +
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL-GQLASKDIIPQP 417
Query: 284 TIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFER 339
+ +++ + K G++N + + E+ K PDK+ T ++ G+ M G EA+ F +
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQV 374
+ G PD +T + LLS +G+ E H Q+
Sbjct: 478 MVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQI 512
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 25/316 (7%)
Query: 111 FVSWNSLVSGFSKRG--DLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQY 168
F ++N L K G DL M F MKSD + N ++S+ A E+G+
Sbjct: 103 FWTYNLLTRSLCKAGLHDLAGQM--FECMKSD-GVSPNNRLLGFLVSSFA-----EKGK- 153
Query: 169 VHCCAVKLGMELQVK----VVNTLINMYGKFGFVDSAFKLF----WAMTEQNMVSWNSMV 220
+H L +V+ VVN+L+N K V+ A KLF + + ++N ++
Sbjct: 154 LHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI 213
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGL 279
G+ +A+ +M G PD T +L+Q C++ L + E V
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVC 273
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQ 335
++ T++++ Y K G++ + + ++ + P V ++ GYA G A +
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
+ I G PD VTFT L+ G V +G ++ M + G+ P YS +++ L
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM-NARGMFPNAFTYSILINAL 392
Query: 396 GRCGLLNDAKELIKNM 411
L A+EL+ +
Sbjct: 393 CNENRLLKARELLGQL 408
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 12/275 (4%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA-CALAKAREEGQY 168
D V++N+L+ GF K +L +F +KS + +T+ S+IS C K RE
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 169 VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE----QNMVSWNSMVAVCT 224
+ ++LG+ N L++ Y K G + +A ++ M ++V++ S++
Sbjct: 300 LDD-MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENI 283
+ G+ ++ + M G+FP+ T L+ A C L + E + G + + +
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL-GQLASKDIIPQP 417
Query: 284 TIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFER 339
+ +++ + K G++N + + E+ K PDK+ T ++ G+ M G EA+ F +
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQV 374
+ G PD +T + LLS +G+ E H Q+
Sbjct: 478 MVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQI 512
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 25/316 (7%)
Query: 111 FVSWNSLVSGFSKRG--DLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQY 168
F ++N L K G DL M F MKSD + N ++S+ A E+G+
Sbjct: 103 FWTYNLLTRSLCKAGLHDLAGQM--FECMKSD-GVSPNNRLLGFLVSSFA-----EKGK- 153
Query: 169 VHCCAVKLGMELQVK----VVNTLINMYGKFGFVDSAFKLF----WAMTEQNMVSWNSMV 220
+H L +V+ VVN+L+N K V+ A KLF + + ++N ++
Sbjct: 154 LHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI 213
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGL 279
G+ +A+ +M G PD T +L+Q C++ L + E V
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVC 273
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQ 335
++ T++++ Y K G++ + + ++ + P V ++ GYA G A +
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLL 395
+ I G PD VTFT L+ G V +G ++ M + G+ P YS +++ L
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM-NARGMFPNAFTYSILINAL 392
Query: 396 GRCGLLNDAKELIKNM 411
L A+EL+ +
Sbjct: 393 CNENRLLKARELLGQL 408
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 137/316 (43%), Gaps = 15/316 (4%)
Query: 102 LFDEMPN----KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 157
+FDEMP+ + S+ +L++ + + G + + MK++ + + LT+ +VI+AC
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE-KISPSILTYNTVINAC 221
Query: 158 ALAKAREEGQYVHCCAVK-LGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMV-- 214
A EG ++ G++ + NTL++ G D A +F M + +V
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 215 --SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHG 272
+++ +V + R + + M G PD + LL+A + V
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 273 VIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI----SKPDKVACTAMLSGYAMHG 328
+ G N + LLNL+ + GR + ++F E+ + PD ++ + G
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401
Query: 329 CGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHY 388
E + F + E +EPD T+ ++ AC GL ++ + Q M+ + P Y
Sbjct: 402 YFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT-ANDIVPSSKAY 460
Query: 389 SCMVDLLGRCGLLNDA 404
+ +++ G+ L +A
Sbjct: 461 TGVIEAFGQAALYEEA 476
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 125/310 (40%), Gaps = 10/310 (3%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
D S+N L+ ++K G + M VF M++ N T+ +++ + ++ + +
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQA-AGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQN----MVSWNSMVAVCTQ 225
+ N LI ++G+ G+ LF M E+N M ++ ++ C +
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
G +A M N + P +++A L + G + +I
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISKP----DKVACTAMLSGYAMHGCGTEAIQFFERTI 341
+LL +++ G + S + + + ++ A + Y G EA++ +
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLL 401
+ +PD T +LS S + LVDE + F+ M + P + Y M+ + G+
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMK-ASDILPSIMCYCMMLAVYGKTERW 613
Query: 402 NDAKELIKNM 411
+D EL++ M
Sbjct: 614 DDVNELLEEM 623
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQF- 336
G+ ++ T L+N Y + GR S ++ + K +K++ + + ++ C + +
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRM-KNEKISPSILTYNTVINACARGGLDWE 229
Query: 337 -----FERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCM 391
F EG++PD VT+ LLSAC+ GL DE + F+ M+D G+ P L YS +
Sbjct: 230 GLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHL 288
Query: 392 VDLLGRCGLLNDAKELIKNMPFE---PNSGVWGALLGASRVYHNISIGKEAAENLIALDP 448
V+ G+ L +L+ M P+ + LL A Y KEA +
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA---YAKSGSIKEAMGVFHQMQA 345
Query: 449 S----DPRNYIMLSNIYSASGLWSDAAKVRALMKT 479
+ + Y +L N++ SG + D ++ MK+
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 155/355 (43%), Gaps = 19/355 (5%)
Query: 86 LVSCYLNMGATPDA----QLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
L++ Y +G A +++ +E + +++ +++GF K D N +VF M +
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE- 548
Query: 142 DLELNELTFISVISA-CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
++ + + + ++ISA C + Q V KL + +I+ Y K G +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ-KLRHRPTTRTFMPIIHGYAKSGDMRR 607
Query: 201 AFKLFWAMTEQNMV----SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
+ ++F M V ++N ++ + + +A+ M L G+ +E T ++Q
Sbjct: 608 SLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Query: 257 ACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KP 312
++ + GLD +I LL K GR+ ++ V E+S
Sbjct: 668 GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 727
Query: 313 DKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYF 372
+ ++ G+A G EA ++ +EG++PD T+T +SACS +G ++
Sbjct: 728 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 787
Query: 373 QVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA---KELIKNMPFEPNSGVWGALL 424
+ M + GV+P + Y+ ++ R L A E +K M +P+ V+ LL
Sbjct: 788 EEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 126/282 (44%), Gaps = 14/282 (4%)
Query: 177 GMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM----VSWNSMVAVCTQNGRPNEA 232
G++ +K + +IN + K +AF +F M ++ M + +N++++ G + A
Sbjct: 514 GVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRA 573
Query: 233 INYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLN 291
I M+ P T + ++ ++ +RR +E V ++ CG + L+N
Sbjct: 574 IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE-VFDMMRRCGCVPTVHTFNGLIN 632
Query: 292 LYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
+ ++ + ++ E++ ++ T ++ GYA G +A ++F R EG++
Sbjct: 633 GLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Query: 348 DHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL 407
D T+ LL AC SG + + MS + Y+ ++D R G + +A +L
Sbjct: 693 DIFTYEALLKACCKSGRMQSALAVTKEMS-ARNIPRNSFVYNILIDGWARRGDVWEAADL 751
Query: 408 IKNMPFE---PNSGVWGALLGASRVYHNISIGKEAAENLIAL 446
I+ M E P+ + + + A +++ + E + AL
Sbjct: 752 IQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 120/292 (41%), Gaps = 49/292 (16%)
Query: 103 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 162
F+++ + +V + +RGD+ F M++ + + S+I A A+ +
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRAR-GITPTSRIYTSLIHAYAVGRD 359
Query: 163 REEGQYVHCCAVKL---GMELQVKVVNTLINMYGKFGFVDSA------------------ 201
+E C K+ G+E+ + + ++ + K G ++A
Sbjct: 360 MDEAL---SCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASI 416
Query: 202 -FKLFWAMTEQ-NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACE 259
K+ +A + NM ++V + G Y +MM + DE + +
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF---- 472
Query: 260 TLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPDKV---- 315
+RL E CG + L+NLY+K+G+++ + +V + + K + V
Sbjct: 473 ----KRLKE--------CGFTPTVVTYGCLINLYTKVGKISKALEV-SRVMKEEGVKHNL 519
Query: 316 -ACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
+ M++G+ A FE ++EGM+PD + + +++SA G +D
Sbjct: 520 KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 157/381 (41%), Gaps = 56/381 (14%)
Query: 98 DAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
+A L D M + D ++ ++V+G KRGD+ +S+ M+ +E + + + ++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVIYTTI 261
Query: 154 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ-- 211
I A K + + G+ V N+LI +G A +L M E+
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 212 --NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA 269
N+V++++++ + G+ EA + M + PD T SL+ +H RL EA
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF-CMH-DRLDEA 379
Query: 270 VHGVIFTCGLD--ENITIVTTLLNLYSKIGRLNASCKVFAEISK---------------- 311
H D N+ TL+ + K R+ ++F E+S+
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 312 -----------------------PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPD 348
PD + + +L G +G +A+ FE + MEPD
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 349 HVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELI 408
T+ ++ +G V++G F +S + GV+P + Y+ M+ R GL +A L
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 409 KNMPFE---PNSGVWGALLGA 426
+ M + PNSG + L+ A
Sbjct: 559 REMKEDGTLPNSGTYNTLIRA 579
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 17/294 (5%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMP----NKDFVSWNSLVSGFSKRGDLGNCMSVFSVM-K 138
+ L+ C N G DA L +M N + V++++L+ F K G L ++ M K
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 139 SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFV 198
+D ++ T+ S+I+ + +E +++ + V NTLI + K V
Sbjct: 354 RSIDPDI--FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 199 DSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSL 254
+ +LF M+++ N V++N+++ Q G + A F M +G+ PD T L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 255 LQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS--- 310
L C+ L + + V + ++ +I ++ K G++ +F +S
Sbjct: 472 LDGLCKYGKLEKAL-VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 311 -KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
KP+ + T M+SG+ G EA F +G P+ T+ L+ A G
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 149/338 (44%), Gaps = 14/338 (4%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPN----KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
L++C+ P A + +M D V+ +SL++G+ + +++ M +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV-M 179
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
+ + N +TF ++I L E + V G + + T++N K G +D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 202 FKLFWAM----TEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA 257
L M E ++V + +++ N+A+N F+ M G+ P+ T SL++
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 258 CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK----PD 313
+ + ++ N+ + L++ + K G+L + K++ E+ K PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 314 KVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQ 373
+++++G+ MH EA FE I + P+ VT+ L+ + V+EG F+
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 374 VMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
MS G+ Y+ ++ L + G + A+++ K M
Sbjct: 420 EMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 176/410 (42%), Gaps = 67/410 (16%)
Query: 55 LKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEM----PNKD 110
L+ +S L+ R ++ S DYR+ + L+ L+ DA LF EM P
Sbjct: 26 LRKASPLFSLRGVYFSA-ASYDYREKLSRNVLLDLKLD-----DAVDLFGEMVQSRPLPS 79
Query: 111 FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVH 170
V +N L+S +K +S+ M+ +L + + ++ +I+ V
Sbjct: 80 IVEFNKLLSAIAKMNKFDLVISLGERMQ-NLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 171 CCAVKLGMELQVKVVNTLINMY--GK-----FGFVDSAFKLFWAMTEQNMVSWNSMVAVC 223
+KLG E + +++L+N Y GK VD F + + + N V++N+++
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY---QPNTVTFNTLIHGL 195
Query: 224 TQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CE----TLHLRRLVEAVHG------ 272
+ + +EA+ M G PD T +++ C+ L L L + G
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 273 VIFTCGLDE--NITIVTTLLNLYSKI----------------------GRLNASCKVFAE 308
VI+T +D N V LNL++++ GR + + ++ ++
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 309 ISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA-CSHSG 363
+ + P+ V +A++ + G EA + ++ I+ ++PD T++ L++ C H
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 364 LVDEGKHYFQVM--SDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
L DE KH F++M D + P + Y+ ++ + + + EL + M
Sbjct: 376 L-DEAKHMFELMISKDCF---PNVVTYNTLIKGFCKAKRVEEGMELFREM 421
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 161/400 (40%), Gaps = 56/400 (14%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVF 134
D F + L+ +A L D M K D V++ +V+G KRGD+ +S+
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 135 SVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK 194
M+ +E + + ++I A K + + G+ V N+LI
Sbjct: 245 KKMEQG-KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 195 FGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
+G A +L M E+ N+V++++++ + G+ EA + M + PD T
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 251 MVSLLQACETLHLRRLVEAVHGVIFTCGLD--ENITIVTTLLNLYSKIGRLNASCKVFAE 308
SL+ +H RL EA H D N+ TL+ + K R++ ++F E
Sbjct: 364 YSSLINGF-CMH-DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 309 ISK---------------------------------------PDKVACTAMLSGYAMHGC 329
+S+ PD + + +L G +G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 330 GTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYS 389
A+ FE R MEPD T+ ++ +G V++G F +S + GV+P + Y+
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPNVVTYT 540
Query: 390 CMVDLLGRCGLLNDAKELIKNMPFE---PNSGVWGALLGA 426
M+ R GL +A L + M E P+SG + L+ A
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 15/293 (5%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMP----NKDFVSWNSLVSGFSKRGDLGNCMSVFSVM-K 138
+ L+ C N G DA L +M N + V++++L+ F K G L ++ M K
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 139 SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFV 198
+D ++ T+ S+I+ + +E +++ + V NTLI + K V
Sbjct: 355 RSIDPDI--FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 199 DSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSL 254
D +LF M+++ N V++ +++ Q + A F M +G+ PD T L
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 255 LQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS---- 310
L V + ++ +I ++ K G++ +F +S
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 311 KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
KP+ V T M+SG+ G EA F EG PD T+ L+ A G
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 11/276 (3%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACAL-AKAREEGQY 168
D V+ NSL++GF + + +S+ M ++ + + TF ++I +A E
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQM-VEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 169 VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM----TEQNMVSWNSMVAVCT 224
V VK G + + ++N K G +D A L M E +V +N+++
Sbjct: 209 VDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENIT 284
N+A+N F+ M G+ P+ T SL++ + + ++ N+
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERT 340
+ L++ + K G+L + K++ E+ K PD +++++G+ MH EA FE
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 341 IREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS 376
I + P+ VT+ L+ + VDEG F+ MS
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 15/267 (5%)
Query: 230 NEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTL 289
++A+N F M + FP LL A ++ LV ++ + G+ N+ + L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 290 LNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
+N + + +L+ + V A++ K PD V ++L+G+ ++A+ + + G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
+PD TF L+ E M V G QP L Y +V+ L + G ++ A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 406 ELIKNM---PFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPR----NYIMLS 458
L+K M EP ++ ++ A Y N++ +A +D R Y L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN---DALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 459 NIYSASGLWSDAAKVRALMKTKVLARN 485
G WSDA+++ + M + + N
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPN 325
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 160/391 (40%), Gaps = 58/391 (14%)
Query: 98 DAQLLFDEM----PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
DA LF +M P V ++ L+S +K +S+ M+ +L + N T+ +
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ-NLGISHNLYTYSIL 122
Query: 154 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ-- 211
I+ V +KLG E + +N+L+N + + A L M E
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 212 --NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATM----------------VS 253
+ ++N+++ ++ R +EA+ M + G PD T +S
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 254 LLQACETLHLRRLVEAVHGVI---------------FT----CGLDENITIVTTLLNLYS 294
LL+ E + V + +I FT G+ N+ +L+
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 295 KIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHV 350
GR + + ++ +++ + P+ V +A++ + G EA + ++ I+ ++PD
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 351 TFTHLLSA-CSHSGLVDEGKHYFQVM--SDVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL 407
T++ L++ C H L DE KH F++M D + P + Y+ ++ + +++ EL
Sbjct: 363 TYSSLINGFCMHDRL-DEAKHMFELMISKDCF---PNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 408 IKNMPFEPNSGVWGALLGASRVYHNISIGKE 438
+ M G+ G + + + H +E
Sbjct: 419 FREM---SQRGLVGNTVTYTTLIHGFFQARE 446
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 15/298 (5%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEM----PNKDFVSWNSLVSGFSKRGDLGNCMSVF 134
D F L+SC N G DA L +M N + V++NSL+ F+K G L +F
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 135 SVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK 194
M ++ N +T+ S+I+ + +E Q + V V NTLIN + K
Sbjct: 334 DEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 195 FGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
V +LF M+ + N V++ +++ Q + A F M +G+ P+ T
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 251 MVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
+LL C+ L + + V + ++ +I + K G++ +F +
Sbjct: 453 YNTLLDGLCKNGKLEKAM-VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 310 S----KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
S KPD +A M+SG+ G EA F + +G PD T+ L+ A G
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 50/319 (15%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
D V++ ++++G KRG+ DL LN L E+G+
Sbjct: 204 DLVTYGAVINGLCKRGEP--------------DLALN------------LLNKMEKGK-- 235
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQ 225
+E V + +T+I+ K+ VD A LF M + ++ +++S+++
Sbjct: 236 --------IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
GR ++A S M + P+ T SL+ A E + + +D NI
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 286 VTTLLNLYSKIGRLNASCKVFA-EISK---PDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
+L+N + RL+ + ++F +SK PD V +++G+ + ++ F
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYF-QVMSDVYGVQPRLDHYSCMVDLLGRCGL 400
R G+ + VT+T L+ + D + F Q++SD GV P + Y+ ++D L + G
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD--GVHPNIMTYNTLLDGLCKNGK 465
Query: 401 LNDAK---ELIKNMPFEPN 416
L A E ++ EP+
Sbjct: 466 LEKAMVVFEYLQKSKMEPD 484
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 124/274 (45%), Gaps = 11/274 (4%)
Query: 112 VSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC-ALAKAREEGQYVH 170
V+ NSL++GF + +++ M ++ + + +TF +++ KA E V
Sbjct: 136 VTLNSLLNGFCHGNRISEAVALVDQM-VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Query: 171 CCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM----TEQNMVSWNSMVAVCTQN 226
VK G + + +IN K G D A L M E ++V +++++ +
Sbjct: 195 RMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIV 286
++A+N F+ M G+ PD T SL+ + + ++ N+
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 287 TTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIR 342
+L++ ++K G+L + K+F E+ + P+ V ++++G+ MH EA Q F +
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 343 EGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS 376
+ PD VT+ L++ + V +G F+ MS
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 157/392 (40%), Gaps = 38/392 (9%)
Query: 230 NEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTL 289
+EA++ F M + FP LL A + LV + + G+ N+ +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 290 LNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
+N + +L+ + + ++ K P V ++L+G+ +EA+ ++ + G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAK 405
+PD VTFT L+ E + M V G QP L Y +++ L + G + A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMV-VKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 406 ELIKNM---PFEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPR----NYIMLS 458
L+ M E + ++ ++ + Y ++ +A +D R Y L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD---DALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 459 NIYSASGLWSDAAKVRALMKTKVLARNPGC----SFIEHGNKIHRFVVDDYSHPDSDKIH 514
+ G WSDA+++ + M + + NP S I+ K + + +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKI--NPNVVTFNSLIDAFAKEGKLI----------EAE 330
Query: 515 KKLEEVMSKIQEFGFVSETESI----LH---DVAEEIKTNMVNKHSEKIALAYGLLVSAA 567
K +E++ + + V+ I +H D A++I T MV+K + Y L++
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 568 DMPLVIIKNLRICRDCHKTAKFVSLIEKRTII 599
++ + + RD + + + T+I
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 19/358 (5%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNK------DFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
++ C +G + A LF+ M K D V++ S++ +S +G++ NC +VF M +
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ L+ N +++ +++ A A+ V + G+ V L+N YG+
Sbjct: 217 E-GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 200 SAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
A ++F M ++ N+V++N+++ NG EA+ F M +G+ P+ ++ +LL
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 256 QACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----K 311
AC + V+ V + G++ N + + Y L + ++ + K
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 312 PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHY 371
D V T ++SG EAI + + + ++ +L A S G V E +
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Query: 372 FQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP---FEPNSGVWGALLGA 426
F M + G +P + Y+ M+ A EL M EP+S AL+ A
Sbjct: 456 FNQMK-MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 512
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 132/307 (42%), Gaps = 10/307 (3%)
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
++ E + V++N+L+ + G L + +F M+ D ++ N ++ ++++AC+ +
Sbjct: 283 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRS 341
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM----VSW 216
K + V A G+ L N+ I Y ++ A L+ +M ++ + V++
Sbjct: 342 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF 401
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT 276
+++ + + EAI+Y M + + S+L A E++ +
Sbjct: 402 TILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKM 461
Query: 277 CGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTE 332
G + ++ T++L+ Y+ + +C++F E+ +PD +AC+A++ + G +
Sbjct: 462 AGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSN 521
Query: 333 AIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMV 392
+ + + F + SAC+ Q+M D Y + + M+
Sbjct: 522 VFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM-DPYLPSLSIGLTNQML 580
Query: 393 DLLGRCG 399
L G+ G
Sbjct: 581 HLFGKSG 587
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 23/297 (7%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEM------PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM 137
D L++ + G A L D+M P++ ++N+L++ G GN V
Sbjct: 50 DALINAHGRAGQWRWAMNLMDDMLRAAIAPSRS--TYNNLINAC---GSSGNWREALEVC 104
Query: 138 KSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQ--VKVVNTLINMYGKF 195
K D + I A R+ + + + G +++ N +I K
Sbjct: 105 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 164
Query: 196 GFVDSAFKLFWAMTEQ------NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
G A LF +M E+ ++V++ S++ + + G F M GL P+
Sbjct: 165 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIV 224
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF--- 306
+ +L+ A + +V G I G+ ++ T LLN Y + + + +VF
Sbjct: 225 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 284
Query: 307 -AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHS 362
E KP+ V A++ Y +G EA++ F + ++G++P+ V+ LL+ACS S
Sbjct: 285 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 19/358 (5%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNK------DFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
++ C +G + A LF+ M K D V++ S++ +S +G++ NC +VF M +
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ L+ N +++ +++ A A+ V + G+ V L+N YG+
Sbjct: 349 E-GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 200 SAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
A ++F M ++ N+V++N+++ NG EA+ F M +G+ P+ ++ +LL
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 256 QACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----K 311
AC + V+ V + G++ N + + Y L + ++ + K
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 312 PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHY 371
D V T ++SG EAI + + + ++ +L A S G V E +
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 587
Query: 372 FQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP---FEPNSGVWGALLGA 426
F M + G +P + Y+ M+ A EL M EP+S AL+ A
Sbjct: 588 FNQMK-MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 644
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 139/325 (42%), Gaps = 18/325 (5%)
Query: 117 LVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKL 176
L+ S+RG + C++VF MK + + +I A ++ + + K
Sbjct: 113 LIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKW 172
Query: 177 GMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMV----SWNSMVAVCTQNGRPNEA 232
+ + + LIN +G+ G A L M + ++N+++ C +G EA
Sbjct: 173 SCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREA 232
Query: 233 INYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNL 292
+ M NG+ PD T +L A ++ + ++ + + T ++
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 292
Query: 293 YSKIGRLNASCKVFAEIS------KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGME 346
SK+G+ + + +F + +PD V T+++ Y++ G FE + EG++
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 347 PDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVY--GVQPRLDHYSCMVDLLGRCGLLNDA 404
P+ V++ L+ A + G+ V+ D+ G+ P + Y+C+++ GR A
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTA---LSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 405 KELIKNMPFE---PNSGVWGALLGA 426
KE+ M E PN + AL+ A
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDA 434
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 132/307 (42%), Gaps = 10/307 (3%)
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
++ E + V++N+L+ + G L + +F M+ D ++ N ++ ++++AC+ +
Sbjct: 415 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRS 473
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM----VSW 216
K + V A G+ L N+ I Y ++ A L+ +M ++ + V++
Sbjct: 474 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF 533
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFT 276
+++ + + EAI+Y M + + S+L A E++ +
Sbjct: 534 TILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKM 593
Query: 277 CGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTE 332
G + ++ T++L+ Y+ + +C++F E+ +PD +AC+A++ + G +
Sbjct: 594 AGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSN 653
Query: 333 AIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMV 392
+ + + F + SAC+ Q+M D Y + + M+
Sbjct: 654 VFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM-DPYLPSLSIGLTNQML 712
Query: 393 DLLGRCG 399
L G+ G
Sbjct: 713 HLFGKSG 719
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 23/297 (7%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEM------PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM 137
D L++ + G A L D+M P++ ++N+L++ G GN V
Sbjct: 182 DALINAHGRAGQWRWAMNLMDDMLRAAIAPSRS--TYNNLINAC---GSSGNWREALEVC 236
Query: 138 KSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQ--VKVVNTLINMYGKF 195
K D + I A R+ + + + G +++ N +I K
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 296
Query: 196 GFVDSAFKLFWAMTEQ------NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
G A LF +M E+ ++V++ S++ + + G F M GL P+
Sbjct: 297 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIV 356
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVF--- 306
+ +L+ A + +V G I G+ ++ T LLN Y + + + +VF
Sbjct: 357 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 416
Query: 307 -AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHS 362
E KP+ V A++ Y +G EA++ F + ++G++P+ V+ LL+ACS S
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 157/329 (47%), Gaps = 19/329 (5%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
D +++++LV+GF G + +++ M ++ + +T ++I+ L E +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRM-VEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM----VSWNSMVAVCTQ 225
V+ G + ++N K G A LF M E+N+ V ++ ++ +
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENIT 284
+G ++A++ F+ M + G+ D T SL+ C + + +I + + +T
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERT 340
+ L++++ K G+L + +++ E+ PD + +++ G+ C EA Q F+
Sbjct: 318 F-SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 341 IREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC-- 398
+ +G EPD VT++ L+++ + VD+G F+ +S G+ P Y+ +V LG C
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS-KGLIPNTITYNTLV--LGFCQS 433
Query: 399 GLLNDAKELIKNM---PFEPNSGVWGALL 424
G LN AKEL + M P+ +G LL
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 124/297 (41%), Gaps = 22/297 (7%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
L+ N G D + EM + D V++++L+ F K G L +++ M +
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR- 344
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
+ + +T+ S+I E + V G E + + LIN Y K VD
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 202 FKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA 257
+LF ++ + N +++N++V Q+G+ N A F M G+ P T LL
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 258 -CETLHLRR---LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS--- 310
C+ L + + E + T G I I +++ +++ + +F +S
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLG----IGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 311 -KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSA-CSHSGLV 365
KPD V M+ G G +EA F + +G PD T+ L+ A SGL+
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 23/254 (9%)
Query: 173 AVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGR 228
A KLG E +TL+N + G V A L M E ++V+ ++++ GR
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 229 PNEAINYFSMMRLNGLFPDEATMVSLL-QACET------LHLRRLVEAVHGVIFTCGLDE 281
+EA+ M G PDE T +L + C++ L L R +E + +
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN-------IKA 243
Query: 282 NITIVTTLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTEAIQFF 337
++ + +++ K G + + +F E+ K D V ++++ G G + +
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 338 ERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGR 397
I + PD VTF+ L+ G + E K + M G+ P Y+ ++D +
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCK 362
Query: 398 CGLLNDAKELIKNM 411
L++A ++ M
Sbjct: 363 ENCLHEANQMFDLM 376
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 166/379 (43%), Gaps = 52/379 (13%)
Query: 94 GATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELT 149
G +A L ++M K D V++ ++V+G K GD + +++ S M+ + ++ + +
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME-ETHIKPDVVI 298
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
+ ++I + QY+ ++ G+ V N +I+ + FG A +L M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 210 EQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-C------ 258
E+ +++++N++++ + G+ EA M +FPD T S++ C
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 259 ETLHLRRLVEAVHGVIFTC------------------------GLDENITIVTTLLNLYS 294
+ H+ L+ + V F GL N T TL++ +
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 295 KIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHV 350
++ LNA+ +F E+ PD + C +L G+ + EA++ FE ++ D V
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 351 TFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG--LLNDAKEL- 407
+ ++ VDE F + ++GV+P + Y+ M+ G CG ++DA L
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLP-IHGVEPDVQTYNVMIS--GFCGKSAISDANVLF 595
Query: 408 --IKNMPFEPNSGVWGALL 424
+K+ EP++ + L+
Sbjct: 596 HKMKDNGHEPDNSTYNTLI 614
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 46/293 (15%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
+ L+S + G +A+ L DEM ++ D V++NS++ GF K + +F +M S
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ +TF ++I AK +EG + + G+ NTLI+ + + ++
Sbjct: 430 P-----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 200 SAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-C 258
+A LF Q M+S +G+ PD T LL C
Sbjct: 485 AAQDLF-----QEMIS--------------------------HGVCPDTITCNILLYGFC 513
Query: 259 ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KPDK 314
E L +E VI +D + +++ K +++ + +F + +PD
Sbjct: 514 ENEKLEEALELFE-VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 315 VACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDE 367
M+SG+ ++A F + G EPD+ T+ L+ C +G +D+
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 172/406 (42%), Gaps = 56/406 (13%)
Query: 94 GATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELT 149
G +A L ++M K D V++ ++V+G K GD + +++ S M+ + ++ + +
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME-ETHIKPDVVI 298
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
+ ++I + QY+ ++ G+ V N +I+ + FG A +L M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 210 EQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQAC------- 258
E+ +++++N++++ + G+ EA M +FPD T S++
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 259 ETLHLRRLVEAVHGVIFTC------------------------GLDENITIVTTLLNLYS 294
+ H+ L+ + V F GL N T TL++ +
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 295 KIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHV 350
++ LNA+ +F E+ PD + C +L G+ + EA++ FE ++ D V
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 351 TFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG--LLNDAKELI 408
+ ++ VDE F + ++GV+P + Y+ M+ G CG ++DA L
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLP-IHGVEPDVQTYNVMIS--GFCGKSAISDANVLF 595
Query: 409 KNMP---FEPNSGVWGAL----LGASRVYHNISIGKEAAENLIALD 447
M EP++ + L L A + +I + E N + D
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 46/293 (15%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
+ L+S + G +A+ L DEM ++ D V++NS++ GF K + +F +M S
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ +TF ++I AK +EG + + G+ NTLI+ + + ++
Sbjct: 430 P-----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 200 SAFKLFWAMTEQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-C 258
+A LF Q M+S +G+ PD T LL C
Sbjct: 485 AAQDLF-----QEMIS--------------------------HGVCPDTITCNILLYGFC 513
Query: 259 ETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KPDK 314
E L +E VI +D + +++ K +++ + +F + +PD
Sbjct: 514 ENEKLEEALELFE-VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 315 VACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDE 367
M+SG+ ++A F + G EPD+ T+ L+ C +G +D+
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 11/260 (4%)
Query: 174 VKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRP 229
+K G E V V++LIN + + V A L M E ++V +N+++ + G
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 230 NEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTT 288
N+A+ F M +G+ D T SL+ C + + ++ + N+ T
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTA 249
Query: 289 LLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
+++++ K G+ + + K++ E+++ PD ++++G MHG EA Q + + +G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
PD VT+ L++ S VDEG F+ M+ G+ Y+ ++ + G + A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ-RGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 405 KELIKNMPFEPNSGVWGALL 424
+E+ M PN + LL
Sbjct: 369 QEIFSRMDSRPNIRTYSILL 388
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 137/291 (47%), Gaps = 13/291 (4%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
D V +N+++ G K G + + + +F M+ D + + +T+ S+++ + + +
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQ 225
V + V +I+++ K G A KL+ MT + ++ ++NS++
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEA--VHGVIFTCGLDEN 282
+GR +EA +M G PD T +L+ C++ +R+ E + + GL +
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS---KRVDEGTKLFREMAQRGLVGD 348
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEI-SKPDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
T++ Y + GR +A+ ++F+ + S+P+ + +L G M+ +A+ FE
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMV 392
+ +E D T+ ++ G V++ F+ +S G++P + Y+ M+
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS-CKGLKPDVVSYTTMI 458
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 123/288 (42%), Gaps = 23/288 (7%)
Query: 78 RDGFIGD-----QLVSCYLNMGATPDAQLLFDEMPNKDFV----SWNSLVSGFSKRGDLG 128
RDG D LV+ G DA L +M +D V ++ +++ F K G
Sbjct: 202 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS 261
Query: 129 NCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTL 188
M ++ M ++ + T+ S+I+ + +E + + V G V NTL
Sbjct: 262 EAMKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 189 INMYGKFGFVDSAFKLFWAMTEQNMV----SWNSMVAVCTQNGRPNEAINYFSMMRLNGL 244
IN + K VD KLF M ++ +V ++N+++ Q GRP+ A FS M
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-- 378
Query: 245 FPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASC 303
P+ T LL C + + + + ++ +IT +++ KIG + +
Sbjct: 379 -PNIRTYSILLYGLCMNWRVEKALVLFEN-MQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 304 KVFAEIS----KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
+F +S KPD V+ T M+SG+ ++ + + +G+ P
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 167/378 (44%), Gaps = 28/378 (7%)
Query: 52 LVALKSSSSLYCCRVIHARVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDF 111
LVAL S + ++ RV K + + D ++ Y G +A +FD M N
Sbjct: 130 LVALNHSGFVVWGELV--RVFKEFSFSPT-VFDMILKVYAEKGLVKNALHVFDNMGNYGR 186
Query: 112 VSWNSLVSGFS----KRGDLGNCMSVFSVMKSDLDLELNELTF---ISVISACALAKARE 164
+ + ++G+ + V+ M + E++ F I V + C +
Sbjct: 187 IPSLLSCNSLLSNLVRKGENFVALHVYDQM---ISFEVSPDVFTCSIVVNAYCRSGNVDK 243
Query: 165 EGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE----QNMVSWNSMV 220
+ LG+EL V N+LIN Y G V+ ++ M+E +N+V++ S++
Sbjct: 244 AMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLI 303
Query: 221 AVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGL 279
+ G EA + F +++ L D+ L+ C T +R V VH + G+
Sbjct: 304 KGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVR-VHDNMIEIGV 362
Query: 280 DENITIVTTLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTEAIQ 335
N TI +L+N Y K G+L + ++F+ ++ KPD ++ GY G EA++
Sbjct: 363 RTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALK 422
Query: 336 FFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC--MVD 393
++ ++ + P +T+ LL S G + +++M GV D SC +++
Sbjct: 423 LCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK-RGVNA--DEISCSTLLE 479
Query: 394 LLGRCGLLNDAKELIKNM 411
L + G N+A +L +N+
Sbjct: 480 ALFKLGDFNEAMKLWENV 497
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 159/381 (41%), Gaps = 56/381 (14%)
Query: 98 DAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 153
+A L D+M + D V++ ++V+G KRGD+ +S+ M+ +E + + + ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVIYNTI 264
Query: 154 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ-- 211
I K ++ + G+ V ++LI+ +G A +L M E+
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 212 --NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA 269
N+V++++++ + G+ EA + M + PD T SL+ +H RL EA
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF-CMH-DRLDEA 382
Query: 270 VHGVIFTCGLD--ENITIVTTLLNLYSKIGRLNASCKVFAEISK---------------- 311
H D N+ +TL+ + K R+ ++F E+S+
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 312 -----------------------PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPD 348
P+ + +L G +G +A+ FE R MEPD
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 349 HVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELI 408
T+ ++ +G V++G F +S + GV P + Y+ M+ R G +A L+
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLS-LKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 409 KNMPFE---PNSGVWGALLGA 426
K M + PNSG + L+ A
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRA 582
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 126/275 (45%), Gaps = 9/275 (3%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
D V+ +SL++G+ + + +++ M ++ + + TF ++I L E +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQM-VEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM----TEQNMVSWNSMVAVCTQ 225
V+ G + + T++N K G +D A L M E ++V +N+++ +
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITI 285
++A+N F+ M G+ PD T SL+ + + ++ N+
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 286 VTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTI 341
+ L++ + K G+L + K++ E+ K PD +++++G+ MH EA FE I
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 342 REGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS 376
+ P+ VT++ L+ + V+EG F+ MS
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 128/299 (42%), Gaps = 17/299 (5%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEM----PNKDFVSWNSLVSGFSKRGDLGNCMSVF 134
D F L+SC N G DA L +M N + V++++L+ F K G L ++
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 135 SVM-KSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYG 193
M K +D ++ T+ S+I+ + +E +++ + V +TLI +
Sbjct: 352 DEMIKRSIDPDI--FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 194 KFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEA 249
K V+ +LF M+++ N V++ +++ Q + A F M G+ P+
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 250 TMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAE 308
T LL C+ L + + V + ++ +I ++ K G++ ++F
Sbjct: 470 TYNILLDGLCKNGKLAKAM-VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 309 IS----KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
+S P+ +A M+SG+ G EA ++ +G P+ T+ L+ A G
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 152/333 (45%), Gaps = 24/333 (7%)
Query: 70 RVIKSLDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN 129
+V+K L + +L+S L+ G P+ V++ +L++GF KRG++
Sbjct: 257 KVLKGLSVDQIEVASRLLSLVLDCGPAPNV------------VTFCTLINGFCKRGEMDR 304
Query: 130 CMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
+F VM+ +E + + + ++I A G + A+ G++L V V ++ I
Sbjct: 305 AFDLFKVMEQR-GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 190 NMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
++Y K G + +A ++ M Q N+V++ ++ Q+GR EA + + G+
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 246 PDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG----RLN 300
P T SL+ C+ +LR A++ + G ++ I L++ SK G +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGF-ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 301 ASCKVFAEISKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACS 360
S K+ + + + V +++ G+ EA++ F G++PD TFT ++
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 361 HSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVD 393
G ++E F M + G++P Y ++D
Sbjct: 543 MEGRLEEALFLFFRMFKM-GLEPDALAYCTLID 574
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 159/359 (44%), Gaps = 29/359 (8%)
Query: 87 VSCYLNMGATPDAQLLFDEM------PNKDFVSWNSLVSGFSKRGDLGNCMSVFS-VMKS 139
+ Y+ G A +++ M PN V++ L+ G + G + ++ ++K
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPN--VVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ E + +T+ S+I G ++ +K+G V + L++ K G +
Sbjct: 421 GM--EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 200 SAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLL 255
A + M Q N+V +NS++ + R +EA+ F +M + G+ PD AT +++
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 256 QACETLHLRRLVEAVHGV--IFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISKPD 313
+ ++ RL EA+ +F GL+ + TL++ + K + ++F ++ + +
Sbjct: 539 RV--SIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF-DLMQRN 595
Query: 314 KVACTAMLSGYAMH---GCG--TEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEG 368
K++ + +H C +A +FF I MEPD VT+ ++ +DE
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 369 KHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP---FEPNSGVWGALL 424
+ F+++ V P + ++ +L + ++ A + M +PN+ +G L+
Sbjct: 656 ERIFELLK-VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 713
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 139/313 (44%), Gaps = 20/313 (6%)
Query: 112 VSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHC 171
V +NSL+ G+ + + VF +M ++ + TF +V+ + EE ++
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLM-GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 172 CAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVSWNSMVAVCT------- 224
K+G+E TLI+ + K +LF M ++N +S + +AVC
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM-QRNKISAD--IAVCNVVIHLLF 612
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA--VHGVIFTCGLDEN 282
+ R +A +F+ + + PD T +++ C LRRL EA + ++ N
Sbjct: 613 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMI--CGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEI----SKPDKVACTAMLSGYAMHGCGTEAIQFFE 338
+T L+++ K ++ + ++F+ + SKP+ V ++ ++ + + FE
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC 398
+G+ P V+++ ++ G VDE + F D + P + Y+ ++ +
Sbjct: 731 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA-KLLPDVVAYAILIRGYCKV 789
Query: 399 GLLNDAKELIKNM 411
G L +A L ++M
Sbjct: 790 GRLVEAALLYEHM 802
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Query: 212 NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVH 271
N+V++ +++ + G + A + F +M G+ PD +L+ + + +
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 272 GVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI----SKPDKVACTAMLSGYAMH 327
G+ ++ + ++ +++Y K G L + V+ + P+ V T ++ G
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 328 GCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH 387
G EA + + ++ GMEP VT++ L+ G + G ++ M + G P +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM-GYPPDVVI 463
Query: 388 YSCMVDLLGRCGLL 401
Y +VD L + GL+
Sbjct: 464 YGVLVDGLSKQGLM 477
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 187/418 (44%), Gaps = 28/418 (6%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNKDFV----SWNSLVSGFSKRGDLGNCMSVFS-VMK 138
D L+ Y+ +A F + +K F + N+L+ + G + V+ + +
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 139 SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFV 198
S + + + L I V + C K + G ++ K G+ + NTLI+ Y G +
Sbjct: 229 SGVGINVYTLN-IMVNALCKDGKMEKVGTFLSQVQEK-GVYPDIVTYNTLISAYSSKGLM 286
Query: 199 DSAFKLFWAMTEQN----MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSL 254
+ AF+L AM + + ++N+++ ++G+ A F+ M +GL PD T SL
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 255 L-QACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK-- 311
L +AC+ + E V + + + ++ +++++L+++ G L+ + F + +
Sbjct: 347 LMEACKKGDVVE-TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 312 --PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
PD V T ++ GY G + A+ +++G D VT+ +L ++ E
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 370 HYFQVMSDVYGVQPRLDHYSCMVDLLGRC--GLLNDAKELIKNMP---FEPNSGVWGALL 424
F M++ + P D Y+ + + G C G L +A EL + M + + LL
Sbjct: 466 KLFNEMTE-RALFP--DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 425 GASRVYHNISIGKEAAENLIALD--PSDPRNYIMLSNIYSASGLWSDAAKVRALMKTK 480
+I KE ++++ + P+ P +Y +L N + G ++A +V M +K
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPT-PISYSILVNALCSKGHLAEAFRVWDEMISK 579
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 137/340 (40%), Gaps = 49/340 (14%)
Query: 77 YRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDF----VSWNSLVSGFSKRGDLGNCMS 132
Y D + L+S Y + G +A L + MP K F ++N++++G K G
Sbjct: 267 YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE 326
Query: 133 VFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 192
VF+ M ++ G+ +L+
Sbjct: 327 VFAEM------------------------------------LRSGLSPDSTTYRSLLMEA 350
Query: 193 GKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDE 248
K G V K+F M + ++V ++SM+++ T++G ++A+ YF+ ++ GL PD
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 249 ATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAE 308
L+Q + + + + G ++ T+L+ K L + K+F E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 309 ISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGL 364
+++ PD T ++ G+ G A++ F++ + + D VT+ LL G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 365 VDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
+D K + M + P YS +V+ L G L +A
Sbjct: 531 IDTAKEIWADMVS-KEILPTPISYSILVNALCSKGHLAEA 569
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 140/342 (40%), Gaps = 60/342 (17%)
Query: 94 GATPDAQLLFDEMP----NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELT 149
G A+ +F EM + D ++ SL+ K+GD+ VFS M+S D+ + +
Sbjct: 319 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR-DVVPDLVC 377
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
F S++S + ++ + G+ + LI Y + G + A L M
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 210 EQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLR 264
+Q ++V++N+++ + EA F+ M LFPD T+ L+ C+ +L+
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 265 RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-------------- 310
+E + + ++ TLL+ + K+G ++ + +++A++
Sbjct: 498 NAMELFQK-MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 311 -------------------------KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGM 345
KP + C +M+ GY G ++ F E+ I EG
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 346 EPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDH 387
PD +++ L+ G V E + MS +G+ +++
Sbjct: 617 VPDCISYNTLI-----YGFVRE-----ENMSKAFGLVKKMEE 648
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 147/345 (42%), Gaps = 16/345 (4%)
Query: 80 GFIGDQLVSCYLNMGATPDAQLLFDEMPNKDF----VSWNSLVSGFSKRGDLGNCMSVFS 135
GF+ D L+ Y ++G PDA F F +L+ K G F
Sbjct: 170 GFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWG-FY 228
Query: 136 VMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKF 195
+ D LN F +++ + Q V K ++ V NTLIN Y K
Sbjct: 229 MEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288
Query: 196 GFVDSAFKLFWAM----TEQNMVSWNSMV-AVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
G +D F+L M T ++ ++++++ A+C +N + + A F M GL P++
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKEN-KMDGAHGLFDEMCKRGLIPNDVI 347
Query: 251 MVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS 310
+L+ L++ + + + GL +I + TL+N + K G L A+ + +
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 311 ----KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVD 366
+PDK+ T ++ G+ G A++ + + G+E D V F+ L+ G V
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 367 EGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
+ + + M G++P Y+ M+D + G +L+K M
Sbjct: 468 DAERALREMLRA-GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 45/245 (18%)
Query: 175 KLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT----EQNMVSWNSMVAVCTQNGRPN 230
+LG E V + TLI + K G VDSA L M + ++V +N + + G+ +
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255
Query: 231 EAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLL 290
A +F + NGL PDE T T+++
Sbjct: 256 MAWKFFHEIEANGLKPDEVT-----------------------------------YTSMI 280
Query: 291 NLYSKIGRLNASCKVFAEISKPDKVACT----AMLSGYAMHGCGTEAIQFFERTIREGME 346
+ K RL+ + ++F + K +V CT M+ GY G EA ER +G
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 347 PDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKE 406
P + + +L+ G VDE F+ M P L Y+ ++D+L R G L+ A E
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 407 LIKNM 411
L +M
Sbjct: 399 LRDSM 403
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 12/249 (4%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
D ++N ++ GF K G + + MK+ E +T+ SVI A +E +
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQ 225
A +EL V + ++LI+ +GK G +D A+ + + ++ N+ +WNS++ +
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 226 NGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENIT 284
NEA+ F M+ P++ T L+ C+ + + G+ +
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF-VFWQEMQKQGMKPSTI 763
Query: 285 IVTTLLNLYSKIGRLNASCKVF----AEISKPDKVACTAMLSGYAMHGCGTEAIQFFERT 340
TT+++ +K G + + +F A PD AM+ G + +A FE T
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823
Query: 341 IREGMEPDH 349
R G+ P H
Sbjct: 824 RRRGL-PIH 831
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 144/364 (39%), Gaps = 34/364 (9%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNK---DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD 142
+++C MG +A +F+EM + ++N L+ + G L + M+
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 143 LELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVN-----TLINMYGKFGF 197
I V C K E CA+ M+ +V + +LI+ GK G
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDE------ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 198 VDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPD----EA 249
VD A+K++ M + N + + S++ +GR + + M PD
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 250 TMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
M + +A E R + E + F ++ L+ K G N + ++F +
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI----KAGFANETYELFYSM 578
Query: 310 SKP----DKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
+ D A ++ G+ G +A Q E +G EP VT+ ++ + +
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 366 DEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM---PFEPNSGVWGA 422
DE F+ + ++ + YS ++D G+ G +++A +++ + PN W +
Sbjct: 639 DEAYMLFE-EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 423 LLGA 426
LL A
Sbjct: 698 LLDA 701
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 83/196 (42%), Gaps = 5/196 (2%)
Query: 218 SMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC 277
MV C + + E + MMR P + +L+ A ++ ++ + +
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEA 333
G + + + TTL+ ++K GR++++ + E+ D V + + G A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 334 IQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVD 393
+FF G++PD VT+T ++ + +DE F+ + V P Y+ M+
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIM 316
Query: 394 LLGRCGLLNDAKELIK 409
G G ++A L++
Sbjct: 317 GYGSAGKFDEAYSLLE 332
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 143/342 (41%), Gaps = 50/342 (14%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSV-MK 138
+ ++ Y G AQ L D M + D +S+N+L++ K G L ++V + M
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 139 SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFV 198
+ L + +T+ +++SAC+ + +
Sbjct: 289 RNSGLRPDAITYNTLLSACS-----------------------------------RDSNL 313
Query: 199 DSAFKLFWAMT----EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSL 254
D A K+F M + ++ ++N+M++V + G EA F + L G FPD T SL
Sbjct: 314 DGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSL 373
Query: 255 LQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS---- 310
L A V+ V+ + G ++ T++++Y K G+L+ + +++ ++
Sbjct: 374 LYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSG 433
Query: 311 -KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGK 369
PD + T ++ EA + G++P T++ L+ + +G +E +
Sbjct: 434 RNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAE 493
Query: 370 HYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
F M G +P YS M+D+L R A L ++M
Sbjct: 494 DTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 46/241 (19%)
Query: 181 QVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNG--RPNEAIN 234
+V+V N ++ +Y + G A +L AM ++ +++S+N+++ ++G PN A+
Sbjct: 224 RVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 235 YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
M+R +GL PD T +LL AC S
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSAC-----------------------------------S 308
Query: 295 KIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHV 350
+ L+ + KVF ++ +PD AM+S Y G EA + F +G PD V
Sbjct: 309 RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAV 368
Query: 351 TFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKN 410
T+ LL A + ++ K +Q M + G Y+ ++ + G+ G L+ A +L K+
Sbjct: 369 TYNSLLYAFARERNTEKVKEVYQQMQKM-GFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Query: 411 M 411
M
Sbjct: 428 M 428
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 34/264 (12%)
Query: 255 LQACETLHLR-------RLVEAVHGV------------IFTCG---LDENITIVTTLLNL 292
L+ E L+LR R+V A+ GV IFT + + + + ++ +
Sbjct: 175 LEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGV 234
Query: 293 YSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTE--AIQFFERTIREGME 346
YS+ G+ + + ++ + + PD ++ +++ G T A++ + G+
Sbjct: 235 YSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLR 294
Query: 347 PDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKE 406
PD +T+ LLSACS +D F+ M + + QP L Y+ M+ + GRCGL +A+
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMISVYGRCGLAAEAER 353
Query: 407 LIKNMP---FEPNSGVWGALLGASRVYHNISIGKEAAENLIALD-PSDPRNYIMLSNIYS 462
L + F P++ + +LL A N KE + + + D Y + ++Y
Sbjct: 354 LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYG 413
Query: 463 ASGLWSDAAKVRALMKTKVLARNP 486
G A ++ MK + RNP
Sbjct: 414 KQGQLDLALQLYKDMKG-LSGRNP 436
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 152/381 (39%), Gaps = 29/381 (7%)
Query: 84 DQLVSCYLNMGATPDAQLLFDEM----PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
+ L+S Y G A+ +F+ M P+ S N L+ G L V ++
Sbjct: 791 NSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQ- 849
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
D+ ++++ + + ++ A A A E + ++ G +++ +I + K V
Sbjct: 850 DMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVR 909
Query: 200 SAFKLFWAMTEQN----MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSL- 254
A + M E N + WNSM+ + T + + + ++ GL PDE T +L
Sbjct: 910 DAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLI 969
Query: 255 LQACETLHLRRLVEA--VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI--- 309
+ C RR E + + GLD + +L++ + K L + ++F E+
Sbjct: 970 IMYCRD---RRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSK 1026
Query: 310 -SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEG 368
K D+ M+ G ++A + + G+EP T L+ + S SG E
Sbjct: 1027 GLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEA 1086
Query: 369 KHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP---FEPNSGVWGALLG 425
+ + D V+ YS ++D R N E + M EP+ +W +
Sbjct: 1087 EKVLSNLKDT-EVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVR 1145
Query: 426 ASRVYHNISIGKEAAENLIAL 446
A+ S KE E ++ L
Sbjct: 1146 AA------SFSKEKIEVMLLL 1160
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 147/341 (43%), Gaps = 25/341 (7%)
Query: 86 LVSCYLNMGATPDAQLLFDEMP----NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
L+ Y G A L+ EM + + V++ +L+ GF K+G++ ++S M D
Sbjct: 204 LIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED- 262
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
+E N L + ++I + + GM L + +I+ G + A
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 202 FKLFWAMTEQN----MVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDE---ATMVSL 254
++ M + + MV + +M+ ++GR A+N + + G PD +TM+
Sbjct: 323 TEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG 382
Query: 255 LQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK--- 311
+ LH +++ C N + T L++ K G ++F++IS+
Sbjct: 383 IAKNGQLH--------EAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGL 434
Query: 312 -PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKH 370
PDK T+ ++G G +A + R ++EG+ D + +T L+ + GL+ E +
Sbjct: 435 VPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQ 494
Query: 371 YFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
F M + G+ P + ++ + G + A +L+ +M
Sbjct: 495 VFDEMLN-SGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 111/274 (40%), Gaps = 46/274 (16%)
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 166
PN V++++ + F K G+L + F MK D L N +TF +I A E
Sbjct: 161 PN--VVTYSTWIDTFCKSGELQLALKSFHSMKRDA-LSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 167 QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAV 222
++ ++ M L V LI+ + K G + A +++ M E N + + +++
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDEN 282
Q G + A+ + + M G+ RL +GVI + GL N
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGM--------------------RLDITAYGVIIS-GLCGN 316
Query: 283 ITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFE 338
G+L + ++ ++ K PD V T M++ Y G A+ +
Sbjct: 317 --------------GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYH 362
Query: 339 RTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYF 372
+ I G EPD V + ++ + +G + E YF
Sbjct: 363 KLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 13/237 (5%)
Query: 186 NTLINMYGKFGFVDSAFKLFWAMT----EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRL 241
N++++ K G V A + +M E +++S+NS++ +NG A +R
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 242 NGLF---PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGR 298
+ F PD + SL + + V GV+ C N+ +T ++ + K G
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGE 178
Query: 299 LNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTH 354
L + K F + + P+ V T ++ GY G A+ ++ R M + VT+T
Sbjct: 179 LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTA 238
Query: 355 LLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
L+ G + + + M + V+P Y+ ++D + G ++A + + M
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDR-VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 111/238 (46%), Gaps = 10/238 (4%)
Query: 180 LQVKVVNTLINMYGKFGFVDSAFKLFWA---MTEQ--NMVSWNSMVAVCTQNGRPNEAIN 234
L + +I++Y + G A +F+ M+ Q +++ +N M+ + +A++
Sbjct: 477 LSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALS 536
Query: 235 YFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYS 294
F M+ G +PDE T SL Q + L + + + G ++ Y
Sbjct: 537 LFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYV 596
Query: 295 KIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHV 350
++G L+ + ++ + K P++V ++++G+A G EAIQ+F G++ +H+
Sbjct: 597 RLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHI 656
Query: 351 TFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELI 408
T L+ A S G ++E + + M D G P + + M+ L G++++A+ +
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYDKMKDSEG-GPDVAASNSMLSLCADLGIVSEAESIF 713
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 188/494 (38%), Gaps = 124/494 (25%)
Query: 104 DEMPNKDFVS--WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 161
D P K ++ +N+L+ + K G L + ++FS M
Sbjct: 296 DSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEM------------------------ 331
Query: 162 AREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMV----SWN 217
+K G+ + NT+I+ G G + A L M E+ + ++N
Sbjct: 332 ------------LKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN 379
Query: 218 SMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTC 277
++++ G A+ Y+ +R GLFPD T ++L L R++V V VI
Sbjct: 380 ILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH---ILCQRKMVAEVEAVI--A 434
Query: 278 GLDEN-ITI----VTTLLNLYSKIG---------------------RLNASCKVFAEI-- 309
+D N I I V ++ +Y G L A V+AE
Sbjct: 435 EMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGL 494
Query: 310 ----------------SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFT 353
+ D + M+ Y +A+ F+ +G PD T+
Sbjct: 495 WVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYN 554
Query: 354 HLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMP- 412
L + LVDE + M D G +P Y+ M+ R GLL+DA +L + M
Sbjct: 555 SLFQMLAGVDLVDEAQRILAEMLDS-GCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK 613
Query: 413 --FEPNSGVWGALLGASRVYHNISIGKEAAENLIALDPSDPR-NYIMLSNIYSASGLWSD 469
+PN V+G+L+ + + +EA + ++ + N+I+L+++
Sbjct: 614 TGVKPNEVVYGSLING---FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL--------- 661
Query: 470 AAKVRALMKTKVLARNPGCSFIEHGNKIHRFVVDDYSHPDSDKIHKKLEEVMSKIQEFGF 529
++A K GC +E +++ + D PD + ++S + G
Sbjct: 662 ---IKAYSKV-------GC--LEEARRVYDKMKDSEGGPDVAASNS----MLSLCADLGI 705
Query: 530 VSETESILHDVAEE 543
VSE ESI + + E+
Sbjct: 706 VSEAESIFNALREK 719
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 159/366 (43%), Gaps = 39/366 (10%)
Query: 86 LVSCYLNMGATPDAQLLFDEM------PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 139
+++ Y+ +G DA L++ M PN+ V + SL++GF++ G + + F +M+
Sbjct: 591 MIASYVRLGLLSDAVDLYEAMEKTGVKPNE--VVYGSLINGFAESGMVEEAIQYFRMME- 647
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ ++ N + S+I A + EE + V+ V N+++++ G V
Sbjct: 648 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVS 707
Query: 200 SAFKLFWAMTEQ---NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
A +F A+ E+ +++S+ +M+ + G +EAI MR +GL D T + +
Sbjct: 708 EAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSD-CTSFNQVM 766
Query: 257 ACETL--HLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIG-------RLNASCKVFA 307
AC L E H ++ L + TL L K G +L +
Sbjct: 767 ACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAK 826
Query: 308 EISKPDKVAC--TAM-LSGYAMHGCGTEAIQFFERTIREGMEP-DHVTFTHLLSACSHSG 363
++ P A +AM L YA+ C + + G P +H + ++ S SG
Sbjct: 827 PLATPAITATLFSAMGLYAYALESC---------QELTSGEIPREHFAYNAVIYTYSASG 877
Query: 364 LVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPF---EPNSGVW 420
+D + M + G++P + + +V + G+ G++ K + + F EP+ ++
Sbjct: 878 DIDMALKAYMRMQE-KGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLF 936
Query: 421 GALLGA 426
A+ A
Sbjct: 937 KAVRDA 942
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 33/254 (12%)
Query: 188 LINMYGKFGFVDSAFKLFW------AMTEQNMVSWNSMVAVCTQNGRPNEAINYFSM--- 238
L+++YGK G V A L W M + V+ ++V V +G + A +F
Sbjct: 186 LVDVYGKAGLVKEA--LLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCA 243
Query: 239 ----MRLNGL--FPDEATMVSLLQACETLHLRRLVEAVHGVI-----FTCGLDEN----- 282
+ L+ + FP + S + + L + I F G D +
Sbjct: 244 GKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPR 303
Query: 283 -ITIVTTLLNLYSKIGRLNASCKVFAEISKP----DKVACTAMLSGYAMHGCGTEAIQFF 337
+ TL++LY K GRLN + +F+E+ K D V M+ HG +EA
Sbjct: 304 LTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLL 363
Query: 338 ERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGR 397
++ +G+ PD T+ LLS + +G ++ Y++ + V G+ P + ++ +L +
Sbjct: 364 KKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKV-GLFPDTVTHRAVLHILCQ 422
Query: 398 CGLLNDAKELIKNM 411
++ + + +I M
Sbjct: 423 RKMVAEVEAVIAEM 436
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 156/382 (40%), Gaps = 51/382 (13%)
Query: 81 FIGDQLVSCYLNMGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSV 136
F + L+ + G A LFD+M K + V++N+L+ G+ K + + +
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 137 MKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFG 196
M LE N +++ VI+ +E +V + G L NTLI Y K G
Sbjct: 266 MALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG 324
Query: 197 FVDSAFKLFWAMTEQNM----VSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMV 252
A + M + +++ S++ + G N A+ + MR+ GL P+E T
Sbjct: 325 NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYT 384
Query: 253 SLLQA------------------------------------CETLHLRRLVEAVHGVIFT 276
+L+ C T + + AV +
Sbjct: 385 TLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI-AVLEDMKE 443
Query: 277 CGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KPDKVACTAMLSGYAMHGCGTE 332
GL ++ +T+L+ + + ++ + +V E+ KPD + ++++ G+ E
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 333 AIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMV 392
A +E +R G+ PD T+T L++A G +++ M + GV P + YS ++
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE-KGVLPDVVTYSVLI 562
Query: 393 DLLGRCGLLNDAKELIKNMPFE 414
+ L + +AK L+ + +E
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYE 584
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 133/313 (42%), Gaps = 15/313 (4%)
Query: 181 QVKVVNTLINMYGKFGFVDSAFKLFWAMT----EQNMVSWNSMVAVCTQNGRPNEAINYF 236
V NTLI+ Y K +D FKL +M E N++S+N ++ + GR E
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 237 SMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSK 295
+ M G DE T +L++ C+ + + + +H + GL ++ T+L++ K
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 296 IGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVT 351
G +N + + ++ P++ T ++ G++ G EA + G P VT
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 352 FTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
+ L++ +G +++ + M + G+ P + YS ++ R +++A + + M
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKE-KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 412 ---PFEPNSGVWGALLGASRVYHNISIGKEAAENLIALD-PSDPRNYIMLSNIYSASGLW 467
+P++ + +L+ + E ++ + P D Y L N Y G
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 468 SDAAKVRALMKTK 480
A ++ M K
Sbjct: 537 EKALQLHNEMVEK 549
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 131/293 (44%), Gaps = 28/293 (9%)
Query: 107 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 166
PN+ ++ +LV GFS++G + V M +D + +T+ ++I+ + E+
Sbjct: 378 PNER--TYTTLVDGFSQKGYMNEAYRVLREM-NDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 167 QYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNM----VSWNSMVAV 222
V + G+ V +T+++ + + VD A ++ M E+ + ++++S++
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 223 CTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDE 281
+ R EA + + M GL PDE T +L+ A C L + ++ +H + G+
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ-LHNEMVEKGVLP 553
Query: 282 NITIVTTLLNLYSKIGRLNAS----CKVFAEISKPDKV---------------ACTAMLS 322
++ + L+N +K R + K+F E S P V + +++
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 323 GYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVM 375
G+ M G TEA Q FE + + +PD + ++ +G + + ++ M
Sbjct: 614 GFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 157/344 (45%), Gaps = 21/344 (6%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYV 169
D V++ ++++G KRG+ +++ + M+ +E + + + ++I K ++ +
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYNTIIDGLCKYKHMDDAFDL 272
Query: 170 HCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQN----MVSWNSMVAVCTQ 225
G++ V N LI+ +G A +L M E+N +V +N+++ +
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK 332
Query: 226 NGRPNEAIN-YFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENI 283
G+ EA Y M++ FPD +L++ C+ + +E V + GL N
Sbjct: 333 EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME-VFREMSQRGLVGNT 391
Query: 284 TIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFER 339
TTL++ + + + + VF ++ PD + +L G +G A+ FE
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEY 451
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
+ M+ D VT+T ++ A +G V++G F +S + GV+P + Y+ M+ R G
Sbjct: 452 MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS-LKGVKPNVVTYTTMMSGFCRKG 510
Query: 400 LLNDAKELIKNMPFE---PNSGVWGALLGASRVYHNISIGKEAA 440
L +A L M + PNSG + L+ A + G EAA
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRA-----RLRDGDEAA 549
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 116/298 (38%), Gaps = 49/298 (16%)
Query: 79 DGFIGDQLVSCYLNMGATPDAQLLFDEM----PNKDFVSWNSLVSGFSKRGDLGNCMSVF 134
D F + L+SC N G DA L +M N D V +N+L+ F K G L ++
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 135 SVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGK 194
M K++ HC V NTLI + K
Sbjct: 344 DEM----------------------VKSK------HCFP-------DVVAYNTLIKGFCK 368
Query: 195 FGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEAT 250
+ V+ ++F M+++ N V++ +++ Q + A F M +G+ PD T
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 251 MVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
LL C ++ + V + + +I TT++ K G++ +F +
Sbjct: 429 YNILLDGLCNNGNVETAL-VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 310 S----KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
S KP+ V T M+SG+ G EA F +G P+ T+ L+ A G
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 116/275 (42%), Gaps = 13/275 (4%)
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENIT 284
Q+ + ++AI F M + FP LL A ++ LV ++ + G+ N+
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 285 IVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERT 340
+ +N + + +L+ + + ++ K P V ++L+G+ +EA+ ++
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 341 IREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGL 400
+ G +PD VTFT L+ E + M V G QP L Y +++ L + G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV-VKGCQPDLVTYGAVINGLCKRGE 230
Query: 401 LNDAKELIKNM---PFEPNSGVWGALLGASRVYHNISIGKEAAENL--IALDPSDPRNYI 455
+ A L+ M E + ++ ++ Y ++ + + + P D Y
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP-DVFTYN 289
Query: 456 MLSNIYSASGLWSDAAKVRALMKTKVLARNPGCSF 490
L + G WSDA+++ + M K + NP F
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNI--NPDLVF 322
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 149/360 (41%), Gaps = 49/360 (13%)
Query: 112 VSWNSLVSGFSKRGDLGNCMSVFSVMKS-------------------------------D 140
V++N+LV GFS RG + + S MKS +
Sbjct: 261 VTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKE 320
Query: 141 LDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
+ L + +++ +I C+ E VK GM NTLI+ +++
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380
Query: 201 AFKLFWAMTEQNMV----SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
A L + E+ +V ++N ++ Q+G +A M +G+ P + T SL+
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
Query: 257 A-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----K 311
C R E V+ G+ ++ ++ TL++ + IG ++ + + E+
Sbjct: 441 VLCRKNKTREADELFEKVVGK-GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 312 PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHY 371
PD V ++ G G EA + R G++PDH+++ L+S S G + KH
Sbjct: 500 PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG---DTKHA 556
Query: 372 FQVMSDV--YGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFE---PNSGVWGALLGA 426
F V ++ G P L Y+ ++ L + A+EL++ M E PN + +++ A
Sbjct: 557 FMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 147/352 (41%), Gaps = 23/352 (6%)
Query: 75 LDYRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNKDFV----SWNSLVSGFSKRGDLGNC 130
L+ + + D LV C + +A F M K F + N +++ S+ + N
Sbjct: 150 LETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENA 209
Query: 131 MSVFSVMKSDLDLELNELTFISVISA-CALAKAREEGQYVHCCAVKLGMELQVKVVNTLI 189
++ M ++++ N TF +I+ C K ++ ++ V G++ + NTL+
Sbjct: 210 WVFYADMYR-MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV-FGIKPTIVTYNTLV 267
Query: 190 NMYGKFGFVDSAFKLFWAMT----EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLF 245
+ G ++ A + M + +M ++N +++ GR +E + M+ GL
Sbjct: 268 QGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLRE---MKEIGLV 324
Query: 246 PDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKV 305
PD + L++ C + A + G+ TL++ ++ A+ +
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 306 FAEISKP----DKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSH 361
EI + D V +++GY HG +A + + +G++P T+T L+
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 362 SGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRC--GLLNDAKELIKNM 411
E F+ + G++P L + ++D G C G ++ A L+K M
Sbjct: 445 KNKTREADELFEKVVG-KGMKPDLVMMNTLMD--GHCAIGNMDRAFSLLKEM 493
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 23/285 (8%)
Query: 86 LVSCYLNMGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
LV+ N DA L +M K + +++++L+ F K G + +F M +
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR-M 289
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
++ + +T+ S+I+ L +E + V G V NTLIN + K V+
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 202 FKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA 257
KLF M+++ N V++N+++ Q G ++A +FS M G+ PD T LL
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 258 -CETLHLRRLVEAVHGVIF----TCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS-- 310
C+ L + + VIF +D +I TT++ K G++ + +F +S
Sbjct: 410 LCDNGELEKAL-----VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 311 --KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFT 353
KPD V T M+SG G E + + +EG+ + T +
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 123/265 (46%), Gaps = 14/265 (5%)
Query: 174 VKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTE----QNMVSWNSMVAVCTQNGRP 229
+KLG E + +L+N + + V A L M E ++V++N+++ + R
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206
Query: 230 NEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTT 288
N+A ++F + G+ P+ T +L+ C + + +I + N+ +
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSA 265
Query: 289 LLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIREG 344
LL+ + K G++ + ++F E+ + PD V +++++G +H EA Q F+ + +G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 345 MEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDA 404
D V++ L++ + V++G F+ MS G+ Y+ ++ + G ++ A
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 405 KELIKNMPF---EPNSGVWGALLGA 426
+E M F P+ + LLG
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGG 409
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 150/342 (43%), Gaps = 16/342 (4%)
Query: 86 LVSCYLNMGATPDAQLLFDEMP----NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL 141
LV+ + DA L D+M D V++N+++ K + + F ++
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK- 219
Query: 142 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSA 201
+ N +T+ ++++ + + + +K + V + L++ + K G V A
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 202 FKLFWAMT----EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA 257
+LF M + ++V+++S++ + R +EA F +M G D + +L+
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 258 -CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----KP 312
C+ + ++ + GL N TL+ + + G ++ + + F+++ P
Sbjct: 340 FCKAKRVEDGMKLFRE-MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 313 DKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYF 372
D +L G +G +A+ FE + M+ D VT+T ++ +G V+E F
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 373 QVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFE 414
+S + G++P + Y+ M+ L GLL++ + L M E
Sbjct: 459 CSLS-LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 155/330 (46%), Gaps = 17/330 (5%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA-CALAKAREEGQY 168
D V +N+++ K + + +++F M++ + N +T+ S+IS C+ + + Q
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 169 VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSWNSMVAVCT 224
+ ++ + + N LI+ + K G A KL+ M ++ ++ ++NS+V
Sbjct: 318 LSD-MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 225 QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENI 283
+ R ++A F M FPD T +L++ C++ + E + + + +
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 284 TIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFER 339
T T + L+ G + + KVF ++ PD + + +L G +G +A++ F+
Sbjct: 437 TYTTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 340 TIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
+ ++ D +T ++ +G VD+G F +S + GV+P + Y+ M+ L
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-LKGVKPNVVTYNTMISGLCSKR 554
Query: 400 LLNDAKELIKNMPFE---PNSGVWGALLGA 426
LL +A L+K M + PNSG + L+ A
Sbjct: 555 LLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 17/292 (5%)
Query: 86 LVSCYLNMGATPDAQLLFDEMP----NKDFVSWNSLVSGFSKRGDLGNCMSVFSVM-KSD 140
L+SC + G DA L +M N + V++N+L+ F K G ++ M K
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 141 LDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDS 200
+D ++ T+ S+++ + ++ + + V V NTLI + K V+
Sbjct: 361 IDPDI--FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 201 AFKLFWAMTEQNMV----SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
+LF M+ + +V ++ +++ +G + A F M +G+ PD T LL
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 257 A-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEIS----K 311
C L + +E V + + +I I TT++ K G+++ +F +S K
Sbjct: 479 GLCNNGKLEKALE-VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 312 PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSG 363
P+ V M+SG EA ++ +G P+ T+ L+ A G
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 136/308 (44%), Gaps = 10/308 (3%)
Query: 112 VSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHC 171
V+ +SL++G+ + + +++ M ++ + +TF ++I L E +
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 172 CAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAM----TEQNMVSWNSMVAVCTQNG 227
V+ G + + ++N K G D A L M E ++V +N+++ +
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 274
Query: 228 RPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVIFTCGLDENITIVT 287
++A+N F M G+ P+ T SL+ + + + ++ N+
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Query: 288 TLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCGTEAIQFFERTIRE 343
L++ + K G+ + K++ ++ K PD ++++G+ MH +A Q FE + +
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 344 GMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLND 403
PD VT+ L+ S V++G F+ MS G+ Y+ ++ L G ++
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 404 AKELIKNM 411
A+++ K M
Sbjct: 454 AQKVFKQM 461
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 141/328 (42%), Gaps = 26/328 (7%)
Query: 90 YLNMGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL 145
Y G A L D M +K D ++N L+ + + + M+ + +
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM-IHP 336
Query: 146 NELTFISVISACALAKAREEGQYVHCCAV-----KLGMELQVKVVNTLINMYGKFGFVDS 200
NE+T+ ++I+ + EG+ + + G+ N LI+ + G
Sbjct: 337 NEVTYNTLINGFS-----NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391
Query: 201 AFKLFWAMTEQNM----VSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQ 256
A K+F+ M + + VS+ ++ +N + A ++ M+ NG+ T ++
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451
Query: 257 A-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNAS----CKVFAEISK 311
C+ L V ++ + G+D +I + L+N + K+GR + C+++
Sbjct: 452 GLCKNGFLDEAVVLLNE-MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 312 PDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHY 371
P+ + + ++ GC EAI+ +E I EG DH TF L+++ +G V E + +
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 372 FQVMSDVYGVQPRLDHYSCMVDLLGRCG 399
+ M+ G+ P + C+++ G G
Sbjct: 571 MRCMTS-DGILPNTVSFDCLINGYGNSG 597
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 144/351 (41%), Gaps = 26/351 (7%)
Query: 94 GATPDAQLLFDEMP----NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELT 149
G +A +L +EM + D V++++L++GF K G + + + L N +
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLSPNGII 515
Query: 150 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT 209
+ ++I C +E ++ + G N L+ K G V A + MT
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 210 EQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLR 264
N VS++ ++ +G +A + F M G P T SLL+ C+ HLR
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 265 ---RLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVAC 317
+ ++++H V + + TLL K G L + +F E+ + PD
Sbjct: 636 EAEKFLKSLHAVPAAV----DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 318 TAMLSGYAMHGCGTEAIQFF-ERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMS 376
T+++SG G AI F E R + P+ V +T + +G G YF+
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI-YFREQM 750
Query: 377 DVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNMPFE---PNSGVWGALL 424
D G P + + M+D R G + +L+ M + PN + LL
Sbjct: 751 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 146/345 (42%), Gaps = 43/345 (12%)
Query: 112 VSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA-CALAKAREEGQYVH 170
+++ ++ G K G L + + + M D ++ + +T+ ++I+ C + + + + V
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKD-GIDPDIVTYSALINGFCKVGRFKTAKEIV- 501
Query: 171 CCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMT----EQNMVSWNSMVAVCTQN 226
C ++G+ + +TLI + G + A +++ AM ++ ++N +V +
Sbjct: 502 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 561
Query: 227 GRPNEAINYFSMMRLNGLFPDEATMVSLLQ----ACETLHLRRLVEAV-----HGVIFTC 277
G+ EA + M +G+ P+ + L+ + E L + + + H FT
Sbjct: 562 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 621
Query: 278 GLDENITIVTTLLNLYSKIGRLNASCKVFAEI----SKPDKVACTAMLSGYAMHGCGTEA 333
G +LL K G L + K + + D V +L+ G +A
Sbjct: 622 G---------SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Query: 334 IQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVM----SDVYG-VQPRLDHY 388
+ F ++ + PD T+T L+ SGL +GK ++ ++ G V P Y
Sbjct: 673 VSLFGEMVQRSILPDSYTYTSLI-----SGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 389 SCMVDLLGRCGLLNDA---KELIKNMPFEPNSGVWGALL-GASRV 429
+C VD + + G +E + N+ P+ A++ G SR+
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 772
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 156/372 (41%), Gaps = 32/372 (8%)
Query: 77 YRDGFIGDQLVSCYLNMGATPDAQLLFDEM------PNKDFVSWNSLVSGFSKRGDLGNC 130
+ D L+S Y +G A LFDEM P + + +L+ + K G +
Sbjct: 230 FPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI--YTTLLGIYFKVGKVEKA 287
Query: 131 MSVFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLIN 190
+ +F MK T+ +I A +E + ++ G+ V +N L+N
Sbjct: 288 LDLFEEMKR-AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 191 MYGKFGFVDSAFKLF-----WAMTEQNMVSWNSMV-AVCTQNGRPNEAINYFSMMRLNGL 244
+ GK G V+ +F W T +VS+N+++ A+ +E ++F M+ + +
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCT-PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSV 405
Query: 245 FPDEATMVSLLQA-CETLHLRR---LVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLN 300
P E T L+ C+T + + L+E + G +L+N K R
Sbjct: 406 SPSEFTYSILIDGYCKTNRVEKALLLLEEMD----EKGFPPCPAAYCSLINALGKAKRYE 461
Query: 301 ASCKVFAEISKP----DKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLL 356
A+ ++F E+ + M+ + G +EA+ F +G PD + L+
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Query: 357 SACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKEL---IKNMPF 413
S +G+++E + M + G + ++ ++ +++ R G+ A E+ IK+
Sbjct: 522 SGMVKAGMINEANSLLRKMEE-NGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 414 EPNSGVWGALLG 425
+P+ + LLG
Sbjct: 581 KPDGVTYNTLLG 592
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 115/292 (39%), Gaps = 56/292 (19%)
Query: 186 NTLINMYGKFGFVDSAFKLFWAMTEQNMVS----WNSMVAVCTQNGRPNEAINYFSMMRL 241
+ LI+ Y K G DSA +LF M + M + +++ + + G+ +A++ F M+
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296
Query: 242 NGLFPDEATMVSLLQACETLHLRRLVEAVHGV---IFTCGLDENITIVTTLLNLYSKIGR 298
G P T L++ L V+ +G + GL ++ + L+N+ K+GR
Sbjct: 297 AGCSPTVYTYTELIKG---LGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 299 LNASCKVFAEIS----------------------------------------KPDKVACT 318
+ VF+E+ P + +
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 319 AMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDV 378
++ GY +A+ E +G P + L++A + + F+ + +
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 379 YG-VQPRLDHYSCMVDLLGRCGLLNDAKEL---IKNMPFEPNSGVWGALLGA 426
+G V R+ Y+ M+ G+CG L++A +L +KN P+ + AL+
Sbjct: 474 FGNVSSRV--YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 23/335 (6%)
Query: 101 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 160
L+ D P + V++ +L++GF KRG++ +F VM+ +E + + + ++I A
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-GIEPDLIAYSTLIDGYFKA 334
Query: 161 KAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQ----NMVSW 216
G + A+ G++L V V ++ I++Y K G + +A ++ M Q N+V++
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 217 NSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQA-CETLHLRRLVEAVHGVIF 275
++ Q+GR EA + + G+ P T SL+ C+ +LR A++ +
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF-ALYEDMI 453
Query: 276 TCGLDENITIVTTLLNLYSKIG----RLNASCKVFAEISKPDKVACTAMLSGYAMHGCGT 331
G ++ I L++ SK G + S K+ + + + V +++ G+
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 332 EAIQFFERTIREGMEPDHVTFTHLLSA-------CSHSGLVDEGKHYFQVMSDVYGVQPR 384
EA++ F G++PD TFT ++ C H G F +M +
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT-IGLQLFDLMQR-NKISAD 571
Query: 385 LDHYSCMVDLLGRCGLLNDAKELIKNM---PFEPN 416
+ + ++ LL +C + DA + N+ EP+
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 147/346 (42%), Gaps = 26/346 (7%)
Query: 87 VSCYLNMGATPDAQLLFDEM------PNKDFVSWNSLVSGFSKRGDLGNCMSVFS-VMKS 139
+ Y+ G A +++ M PN V++ L+ G + G + ++ ++K
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPN--VVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 140 DLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMYGKFGFVD 199
+ E + +T+ S+I G ++ +K+G V + L++ K G +
Sbjct: 421 GM--EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 200 SAFKLFWAMTEQ----NMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATM---- 251
A + M Q N+V +NS++ + R +EA+ F +M + G+ PD AT
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 252 -VSLLQACETLHLRRLVE-AVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI 309
VS+++ H++ + + ++ + +I + +++L K R+ + K F +
Sbjct: 539 RVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 598
Query: 310 ----SKPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLV 365
+PD V M+ GY EA + FE P+ VT T L+ + +
Sbjct: 599 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 658
Query: 366 DEGKHYFQVMSDVYGVQPRLDHYSCMVDLLGRCGLLNDAKELIKNM 411
D F +M++ G +P Y C++D + + + +L + M
Sbjct: 659 DGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 143/326 (43%), Gaps = 36/326 (11%)
Query: 110 DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA-CALAKAREEGQY 168
D V + LV G SK+G + + M FSV + LN + F S+I C L + E +
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMR-FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 169 VHCCAVKLGMELQVKVVNTLINMYGKFGFVDSAF----------KLFWAMTEQNMVSWNS 218
+ G++ V T++ + ++ AF +LF M ++N +S +
Sbjct: 519 FRLMGI-YGIKPDVATFTTVM----RVSIMEDAFCKHMKPTIGLQLFDLM-QRNKISAD- 571
Query: 219 MVAVCT-------QNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEA-- 269
+AVC + R +A +F+ + + PD T +++ C LRRL EA
Sbjct: 572 -IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI--CGYCSLRRLDEAER 628
Query: 270 VHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEI----SKPDKVACTAMLSGYA 325
+ ++ N +T L+++ K ++ + ++F+ + SKP+ V ++ ++
Sbjct: 629 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 688
Query: 326 MHGCGTEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRL 385
+ + FE +G+ P V+++ ++ G VDE + F D + P +
Sbjct: 689 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA-KLLPDV 747
Query: 386 DHYSCMVDLLGRCGLLNDAKELIKNM 411
Y+ ++ + G L +A L ++M
Sbjct: 748 VAYAILIRGYCKVGRLVEAALLYEHM 773
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 14/223 (6%)
Query: 177 GMELQVKVVNTLINMYGKFGFVDSAFKLFWAMTEQNMVS----WNSMVAVCTQNGRPNEA 232
G++ ++ L+N K D+ +K+F M + +V+ +N +V C+++G P +A
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 233 INYFSMMRLNGLFPDEATMVSLLQAC--ETLHLRRLVEAVHGVIFTCGLDENITIVTTLL 290
S M G+FPD T +L+ +++H L +V + G+ NI + +
Sbjct: 223 EKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEAL--SVQDRMERSGVAPNIVTYNSFI 280
Query: 291 NLYSKIGRLNASCKVFAEIS---KPDKVACTAMLSGYAMHGCGTEAIQFFERTIREGMEP 347
+ +S+ GR+ + ++F EI + V T ++ GY EA++ E G P
Sbjct: 281 HGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSP 340
Query: 348 DHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC 390
VT+ +L G + E ++++++ G + D+ +C
Sbjct: 341 GVVTYNSILRKLCEDGRIREAN---RLLTEMSGKKIEPDNITC 380
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 16/312 (5%)
Query: 77 YRDGFIGDQLVSCYLNMGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRGDLGNCMS 132
+ D F + L+S Y +A + D M + V++NS + GFS+ G +
Sbjct: 235 FPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATR 294
Query: 133 VFSVMKSDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 192
+F +K D+ N +T+ ++I +E + G V N+++
Sbjct: 295 LFREIKDDVT--ANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 193 GKFGFVDSAFKLFWAMT----EQNMVSWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDE 248
+ G + A +L M+ E + ++ N+++ + A+ M +GL D
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 249 ATMVSLLQA-CETLHLRRLVEAVHGVIFTCGLDENITIVTTLLNLYSKIGRLNASCKVFA 307
+ +L+ C+ L L E + +I G + L++ + + + K+
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMI-EKGFSPGYATYSWLVDGFYNQNKQDEITKLLE 471
Query: 308 EISKPDKVACTAMLSGYAMHGCGTEAIQF----FERTIREGMEPDHVTFTHLLSACSHSG 363
E K A A+ G C E + + FE ++G+ D V FT + A +G
Sbjct: 472 EFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTG 531
Query: 364 LVDEGKHYFQVM 375
V E F VM
Sbjct: 532 KVTEASALFDVM 543
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 140/342 (40%), Gaps = 43/342 (12%)
Query: 215 SWNSMVAVCTQNGRPNEAINYFSMMRLNGLFPDEATMVSLLQACETLHLRRLVEAVHGVI 274
SW ++ + G N++I F +R GL P LL + L V + +
Sbjct: 137 SW--LMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 275 FTCGLDENITIVTTLLNLYSKIGRLNASCKVFAEISK----PDKVACTAMLSGYAMHGCG 330
G+ NI + L++ SK G + K+ +E+ + PD ++S Y
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 331 TEAIQFFERTIREGMEPDHVTFTHLLSACSHSGLVDEGKHYFQVMSDVYGVQPRLDHYSC 390
EA+ +R R G+ P+ VT+ + S G + E F+ + D V Y+
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD--DVTANHVTYTT 312
Query: 391 MVDLLGRCGLLNDA---KELIKNMPFEPNSGVWGALL----------GASRVYHNISIGK 437
++D R +++A +E++++ F P + ++L A+R+ +S K
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 438 EAAENLIALDPSDPRNYIMLSNIYSA---------SGLWSDAAKVRALMKT--KVL---- 482
+N+ + Y + ++ SA SGL D +AL+ KVL
Sbjct: 373 IEPDNITC--NTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELEN 430
Query: 483 ARNPGCSFIEH----GNKIHRFVVDD-YSHPDSDKIHKKLEE 519
A+ S IE G + ++VD Y+ D+I K LEE
Sbjct: 431 AKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472