Miyakogusa Predicted Gene

Lj2g3v0561310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0561310.1 tr|K1PKH8|K1PKH8_CRAGI UPF0415 protein
C7orf25-like protein (Fragment) OS=Crassostrea gigas PE=4
SV=,39.5,5e-19,DUF1308,Protein of unknown function DUF1308;
UNCHARACTERIZED DUF1308,Protein of unknown function DUF,CUFF.34726.1
         (123 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G73380.1 | Symbols:  | unknown protein; CONTAINS InterPro DOM...   176   2e-45

>AT1G73380.1 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF1308
           (InterPro:IPR010733); Has 162 Blast hits to 160 proteins
           in 67 species: Archae - 0; Bacteria - 2; Metazoa - 120;
           Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes -
           6 (source: NCBI BLink). | chr1:27589100-27590657 FORWARD
           LENGTH=434
          Length = 434

 Score =  176 bits (447), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 101/122 (82%)

Query: 2   SELQNPIHVEFSRILCGKNGIICESVLTEFKELVLMCGGPNEKLRADKLINCLRVVPDDP 61
           SE++ P  V+   +L GK GI+C+SV +EFKELV M  GPNEKLRA++L+  L VV D+P
Sbjct: 313 SEIEKPGLVKVGTVLSGKRGIVCKSVFSEFKELVSMYAGPNEKLRAEQLLKSLMVVNDNP 372

Query: 62  SDRMMGLPTTRKLALKNKVVFGTGDQWHAPTLTANMAFARAVSQTGMSLSTIEHRPRALT 121
           S+R+M LPTTRKLA+KNK VFGTGD+W APTLTANMAF RAV+Q+GMSLSTI+H PRALT
Sbjct: 373 SERVMSLPTTRKLAMKNKTVFGTGDRWGAPTLTANMAFVRAVAQSGMSLSTIDHSPRALT 432

Query: 122 GD 123
           GD
Sbjct: 433 GD 434