Miyakogusa Predicted Gene
- Lj2g3v0560050.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0560050.2 tr|G7ICR0|G7ICR0_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_1g0,26.64,7e-19,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
PPR_2,P,CUFF.34748.2
(306 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 7e-73
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 265 2e-71
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 8e-71
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 7e-70
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 257 9e-69
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 3e-68
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 6e-68
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 253 1e-67
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 252 2e-67
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 3e-66
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 3e-66
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 4e-66
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 1e-65
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 2e-65
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 3e-65
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 245 3e-65
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 245 3e-65
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 5e-65
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 5e-65
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 6e-65
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 7e-65
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 8e-65
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 1e-64
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 243 2e-64
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 2e-64
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 2e-64
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 3e-64
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 3e-64
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 241 5e-64
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 7e-64
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 1e-63
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 1e-63
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 2e-63
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 2e-63
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 3e-63
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 4e-63
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 4e-63
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 5e-63
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 5e-63
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 6e-63
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 237 7e-63
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 8e-63
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 4e-62
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 234 4e-62
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 7e-62
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 8e-62
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 1e-61
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 3e-61
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 3e-61
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 231 4e-61
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 231 6e-61
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 229 2e-60
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 2e-60
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 2e-60
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 3e-60
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 5e-60
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 6e-60
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 7e-60
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 1e-59
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 1e-59
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 226 2e-59
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 226 2e-59
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 3e-59
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 3e-59
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 4e-59
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 5e-59
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 6e-59
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 6e-59
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 224 7e-59
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 2e-58
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 3e-58
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 3e-58
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 3e-58
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 3e-58
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 4e-58
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 7e-58
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 8e-58
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 219 1e-57
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 2e-57
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 4e-57
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 218 4e-57
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 218 5e-57
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 5e-57
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 217 7e-57
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 217 7e-57
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 9e-57
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 9e-57
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 1e-56
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 1e-56
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 1e-56
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 2e-56
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 3e-56
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 4e-56
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 6e-56
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 7e-56
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 8e-56
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 1e-55
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 213 1e-55
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 1e-55
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 213 1e-55
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 1e-55
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 213 1e-55
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 1e-55
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 1e-55
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 213 2e-55
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 2e-55
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 2e-55
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 3e-55
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 212 3e-55
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 4e-55
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 5e-55
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 6e-55
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 8e-55
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 1e-54
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 1e-54
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 209 2e-54
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 209 2e-54
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 209 3e-54
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 3e-54
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 6e-54
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 6e-54
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 1e-53
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 1e-53
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 205 2e-53
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 3e-53
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 3e-53
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 5e-53
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 6e-53
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 2e-52
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 2e-52
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 3e-52
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 4e-52
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 5e-52
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 5e-52
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 6e-52
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 6e-52
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 200 1e-51
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 2e-51
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 199 2e-51
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 5e-51
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 1e-50
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 2e-50
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 3e-50
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 6e-50
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 8e-50
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 1e-49
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 1e-49
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 2e-49
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 3e-49
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 190 9e-49
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 2e-48
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 2e-48
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 188 5e-48
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 3e-47
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 1e-45
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 3e-45
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 3e-45
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 4e-45
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 7e-45
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 1e-43
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 1e-43
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 2e-43
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 2e-43
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 8e-43
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 9e-43
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 2e-42
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 169 2e-42
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 6e-40
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 9e-40
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 1e-39
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 153 1e-37
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 2e-36
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 2e-34
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 1e-32
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 3e-29
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 5e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 83 3e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 77 2e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 76 3e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 3e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 3e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 8e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 8e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 9e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 70 2e-12
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 68 8e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 3e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 63 2e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 62 4e-10
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 62 5e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 62 6e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 62 7e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 7e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 61 9e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 1e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 1e-09
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 59 5e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 58 9e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 57 1e-08
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 6e-08
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 55 7e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 7e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 54 1e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 53 2e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 53 2e-07
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 53 3e-07
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 3e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 4e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 4e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 49 4e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 5e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 270 bits (691), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 194/304 (63%), Gaps = 1/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC L +AR++F+ + +N++ WT++I+G+A+ EA DLFR+M+R I P+ T
Sbjct: 255 MYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCT 314
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
LA +L +C+ LGSL G+ + Y+ G+++D TS + MY++CG+IQ AR VFD +
Sbjct: 315 LAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP 374
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++++ W+SMIN + I+G+ EA++ FHKM + ++P+++ + S+L ACSHSG V++G
Sbjct: 375 ERNVISWSSMINAFGINGLFEEALDCFHKMK-SQNVVPNSVTFVSLLSACSHSGNVKEGW 433
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K F+SM D+G+ P +HY C+ DLLGR G++ A I MP+ A AW LLSACRI
Sbjct: 434 KQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRI 493
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H V+L A KL + P S YVL++N+Y G W+ + +R + K K G+S
Sbjct: 494 HKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Query: 301 QVEV 304
EV
Sbjct: 554 ATEV 557
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 4/246 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYA+ + SA+++FD +N + W ++ GY + E LF M T + D T
Sbjct: 153 MYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALT 212
Query: 61 LATVLSACADLGSLSKGQEIEEY-IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
L ++ AC ++ + G+ + I +D +Q S++ MY KC + AR++F+
Sbjct: 213 LICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETS 272
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
D+++ +WT++I+ +A EA +LF +M + E I+P+ +IL++CS G + G
Sbjct: 273 VDRNVVMWTTLISGFAKCERAVEAFDLFRQM-LRESILPNQCTLAAILVSCSSLGSLRHG 331
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
M + GI ++T D+ R G + +A MP + +WS +++A
Sbjct: 332 KSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINAFG 389
Query: 240 IHGNVE 245
I+G E
Sbjct: 390 INGLFE 395
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 21 KNILSWTSMIAGYAQSGHP--AEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQ 78
+N SW ++++GY++S ++ L L+ RM R D L + AC LG L G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 79 EIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHG 138
I GLD D V SL+ MY++ G+++ A++VFD + ++ +W ++ Y +
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 139 MGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
E LF M + + DA+ ++ AC +
Sbjct: 190 KDPEVFRLFCLMR-DTGLALDALTLICLVKACGN 222
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 265 bits (678), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 196/304 (64%), Gaps = 2/304 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM-VRTDIRPDGAT 60
YA ++ +AR + + K+I++W ++I+ Y Q+G P EAL +F + ++ +++ + T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L + LSACA +G+L G+ I YI +G+ ++ V ++L+HMYSKCG ++K+REVF+ V
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D+ +W++MI A+HG GNEA+++F+KM E + P+ + +T++ ACSH+GLV++
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ-EANVKPNGVTFTNVFCACSHTGLVDEAE 486
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
F M ++GI P KHY C+ D+LGR G L+ AV I+ MP+ W LL AC+I
Sbjct: 487 SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 546
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H N+ L E+A +L +L P + G++VL++N+Y LGKW+ +R + L KE G S
Sbjct: 547 HANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606
Query: 301 QVEV 304
+E+
Sbjct: 607 SIEI 610
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 136/272 (50%), Gaps = 33/272 (12%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y C +L SA ++F K+++SW SMI G+ Q G P +AL+LF++M D++ T+
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
VLSACA + +L G+++ YI ++++ + ++L MY+KCGSI+ A+ +FD + +
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 122 KDLTIWTSMINCYAI-------------------------------HGMGNEAINLFHKM 150
KD WT+M++ YAI +G NEA+ +FH++
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 151 TVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVG 210
+++ + + I S L AC+ G +E G ++ S + GI + L + + G
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCG 414
Query: 211 QLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
L+ + + + WS ++ +HG
Sbjct: 415 DLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 111/272 (40%), Gaps = 43/272 (15%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMV-RTDIRPDGATLATVL 65
+L AR++FD N +W ++I YA P ++ F MV + P+ T ++
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 66 SACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT 125
A A++ SLS GQ + + D V SL+H Y CG + A +VF + +KD+
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 126 IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC--------------- 170
W SMIN + G ++A+ LF KM E+ + + +L AC
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESED-VKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 171 --------------------SHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVG 210
+ G +ED + F +M E + +T + D
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT-----WTTMLDGYAISE 312
Query: 211 QLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
+ A + + MP AW+ L+SA +G
Sbjct: 313 DYEAAREVLNSMP-QKDIVAWNALISAYEQNG 343
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 76/145 (52%), Gaps = 2/145 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC +L +R +F+ +++ W++MI G A G EA+D+F +M +++P+G T
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
Query: 61 LATVLSACADLGSLSKGQEI-EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
V AC+ G + + + + + YG+ +++ ++ + + G ++KA + + +
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Query: 120 T-DKDLTIWTSMINCYAIHGMGNEA 143
++W +++ IH N A
Sbjct: 529 PIPPSTSVWGALLGACKIHANLNLA 553
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 263 bits (673), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 197/302 (65%), Gaps = 1/302 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+KC L A+ IFD T K+++ WT+MI+ Y +S +P EAL +F M + I+PD ++
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+V+SACA+LG L K + + I++ GL+ + + +L++MY+KCG + R+VF+++
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+++ W+SMIN ++HG ++A++LF +M +E + P+ + + +L CSHSGLVE+G K
Sbjct: 408 RNVVSWSSMINALSMHGEASDALSLFARMK-QENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
F SM +++ I P ++HY C+ DL GR L A++ I+ MP+ W L+SACRIH
Sbjct: 467 IFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIH 526
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
G +ELG+ AA ++ +L P G+ VLM+N+Y +W++ +R +++ K + KE G S+
Sbjct: 527 GELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSR 586
Query: 302 VE 303
++
Sbjct: 587 ID 588
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 36/293 (12%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYA C + AR +FD + +++++W +MI Y + G EA LF M +++ PD
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHM------------------ 102
L ++SAC G++ + I E++ + +D + T+L+ M
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 103 -------------YSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHK 149
YSKCG + A+ +FD+ KDL WT+MI+ Y EA+ +F +
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 150 MTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRV 209
M I PD + S++ AC++ G+++ +H + G+ + L ++ +
Sbjct: 335 MCCSG-IKPDVVSMFSVISACANLGILDKAKWVHSCIHVN-GLESELSINNALINMYAKC 392
Query: 210 GQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVE--LGELAAAKLSDLSPG 260
G LD D + MP +WS +++A +HG L A K ++ P
Sbjct: 393 GGLDATRDVFEKMPRR-NVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
+ + ++S P + ++R+ R D + +L A + + +L +G E+ +
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAIN 145
D V+T + MY+ CG I AR VFD ++ +D+ W +MI Y G+ +EA
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFK 198
Query: 146 LFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKH----YTC 201
LF +M + +MPD ++ +I+ AC +G +++ ++++E F I V+ T
Sbjct: 199 LFEEMK-DSNVMPDEMILCNIVSACGRTG----NMRYNRAIYE-FLIENDVRMDTHLLTA 252
Query: 202 LADLLGRVGQLDLAVDAIQGMPL 224
L + G +D+A + + M +
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSV 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC L + R +F+ +N++SW+SMI + G ++AL LF RM + ++ P+ T
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Query: 61 LATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
VL C+ G + +G++I + Y + + ++ ++ + +++A EV + +
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Query: 120 -TDKDLTIWTSMINCYAIHG 138
++ IW S+++ IHG
Sbjct: 508 PVASNVVIWGSLMSACRIHG 527
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 260 bits (665), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 199/306 (65%), Gaps = 3/306 (0%)
Query: 2 YAKCDNLTSARRIFDLTAG--KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
Y K + AR + ++ +N +SWT +I+GYA+SG +EA+++F+RM+ ++ PD
Sbjct: 192 YGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEV 251
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
TL VLSACADLGSL G+ I Y+ G++ + +++ MY+K G+I KA +VF+ V
Sbjct: 252 TLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV 311
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++++ WT++I A HG G EA+ +F++M V+ + P+ + + +IL ACSH G V+ G
Sbjct: 312 NERNVVTWTTIIAGLATHGHGAEALAMFNRM-VKAGVRPNDVTFIAILSACSHVGWVDLG 370
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ F SM +GI P ++HY C+ DLLGR G+L A + I+ MP A W LL+A
Sbjct: 371 KRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASN 430
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+H ++ELGE A ++L L P +SG+Y+L+ANLY++LG+W E+ +MRN++ G + K G
Sbjct: 431 VHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGE 490
Query: 300 SQVEVK 305
S +EV+
Sbjct: 491 SSIEVE 496
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK N+T A +F+ +N+++WT++IAG A GH AEAL +F RMV+ +RP+ T
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 61 LATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+LSAC+ +G + G+ + + YG+ + + ++ + + G +++A EV +
Sbjct: 354 FIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
Query: 120 TDK-DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAI 161
K + IW S++ A N+ H + + ER + + I
Sbjct: 414 PFKANAAIWGSLL----------AASNVHHDLELGERALSELI 446
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 36/235 (15%)
Query: 42 ALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLH 101
A+ ++R++ +PD T VL + + G++I + ++G D V T L+
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 102 MYSKCGSIQKAREVFDRVTDKDLTI---------------------------------WT 128
MY CG + AR++FD + KD+ + WT
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 129 SMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHE 188
+I+ YA G +EAI +F +M +E + PD + ++L AC+ G +E G + S +
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMEN-VEPDEVTLLAVLSACADLGSLELGERIC-SYVD 277
Query: 189 DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGN 243
G+ V + D+ + G + A+D + + + W+ +++ HG+
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGH 331
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 257 bits (656), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 191/307 (62%), Gaps = 6/307 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + +A+ +FD N++ W +MI+GYA++G+ EA+D+F M+ D+RPD +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ + +SACA +GSL + + + EY+ D + ++L+ M++KCGS++ AR VFDR
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEER--IMPDAIVYTSILLACSHSGLVED 178
D+D+ +W++MI Y +HG EAI+L+ M ER + P+ + + +L+AC+HSG+V +
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAM---ERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
G FF M D I P +HY C+ DLLGR G LD A + I+ MP+ W LLSAC
Sbjct: 443 GWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
+ H +VELGE AA +L + P ++G YV ++NLY + W +R + K L K+ G
Sbjct: 502 KKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVG 561
Query: 299 RSQVEVK 305
S VEV+
Sbjct: 562 CSWVEVR 568
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 140/247 (56%), Gaps = 11/247 (4%)
Query: 1 MYAKCDNLTSARRIFD--LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDG 58
+YAKC L SAR +F+ + I+SWT++++ YAQ+G P EAL++F +M + D++PD
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDW 222
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
L +VL+A L L +G+ I + GL+++ + SL MY+KCG + A+ +FD+
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ +L +W +MI+ YA +G EAI++FH+M + + + PD I TS + AC+ G +E
Sbjct: 283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQ 341
Query: 179 GLKFFKSMHEDFGIA---PTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
+SM+E G + V + L D+ + G ++ A + LD WS ++
Sbjct: 342 A----RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMI 396
Query: 236 SACRIHG 242
+HG
Sbjct: 397 VGYGLHG 403
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
++T AR++FD I W ++I GY+++ H +AL ++ M + PD T +L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
AC+ L L G+ + ++ G D D VQ L+ +Y+KC + AR VF+ + + TI
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 127 --WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLA 169
WT++++ YA +G EA+ +F +M + + PD + S+L A
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMD-VKPDWVALVSVLNA 231
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Query: 78 QEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIH 137
++I + + GL + T L+H S G I AR+VFD + + W ++I Y+ +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
+A+ ++ M + R+ PD+ + +L ACS ++ G +F + G V
Sbjct: 98 NHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMG-RFVHAQVFRLGFDADVF 155
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGMPLDVQA-QAWSCLLSA 237
L L + +L A +G+PL + +W+ ++SA
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 254 bits (650), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 186/304 (61%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YA C ++ SA ++FD K++++W S+I G+A++G P EAL L+ M I+PDG T
Sbjct: 165 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ ++LSACA +G+L+ G+ + Y+ GL + LL +Y++CG +++A+ +FD +
Sbjct: 225 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
DK+ WTS+I A++G G EAI LF M E ++P I + IL ACSH G+V++G
Sbjct: 285 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++F+ M E++ I P ++H+ C+ DLL R GQ+ A + I+ MP+ W LL AC +
Sbjct: 345 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 404
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HG+ +L E A ++ L P SG YVL++N+Y S +W + +R + + K G S
Sbjct: 405 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 464
Query: 301 QVEV 304
VEV
Sbjct: 465 LVEV 468
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 5/237 (2%)
Query: 8 LTSARRIFD-LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM-VRTDIRPDGATLATVL 65
++ A ++F + N+ W ++I GYA+ G+ A L+R M V + PD T ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 66 SACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT 125
A + + G+ I + G VQ SLLH+Y+ CG + A +VFD++ +KDL
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 126 IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKS 185
W S+IN +A +G EA+ L+ +M + I PD S+L AC+ G + G +
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMN-SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 186 MHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
M + G+ + L DL R G+++ A M +D + +W+ L+ ++G
Sbjct: 248 MIK-VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 302
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 254 bits (648), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 186/304 (61%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YA C ++ SA ++FD K++++W S+I G+A++G P EAL L+ M I+PDG T
Sbjct: 32 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ ++LSACA +G+L+ G+ + Y+ GL + LL +Y++CG +++A+ +FD +
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
DK+ WTS+I A++G G EAI LF M E ++P I + IL ACSH G+V++G
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++F+ M E++ I P ++H+ C+ DLL R GQ+ A + I+ MP+ W LL AC +
Sbjct: 212 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 271
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HG+ +L E A ++ L P SG YVL++N+Y S +W + +R + + K G S
Sbjct: 272 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 331
Query: 301 QVEV 304
VEV
Sbjct: 332 LVEV 335
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 77 GQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAI 136
G+ I + G VQ SLLH+Y+ CG + A +VFD++ +KDL W S+IN +A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 137 HGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTV 196
+G EA+ L+ +M + I PD S+L AC+ G + G + M + G+ +
Sbjct: 67 NGKPEEALALYTEMN-SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNL 124
Query: 197 KHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
L DL R G+++ A M +D + +W+ L+ ++G
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 169
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 253 bits (645), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 182/307 (59%), Gaps = 2/307 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
MYAKC ++ A +F K+I+SW ++I GY+++ + EAL LF ++ PD
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T+A VL ACA L + KG+EI YI G D+ V SL+ MY+KCG++ A +FD +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
KDL WT MI Y +HG G EAI LF++M + I D I + S+L ACSHSGLV++G
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR-QAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+FF M + I PTV+HY C+ D+L R G L A I+ MP+ A W LL CR
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
IH +V+L E A K+ +L P ++G YVLMAN+Y KW++ +R I + L K G
Sbjct: 680 IHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGC 739
Query: 300 SQVEVKA 306
S +E+K
Sbjct: 740 SWIEIKG 746
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 128/245 (52%), Gaps = 8/245 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC +L SA+ +F + ++++S+TSMIAGYA+ G EA+ LF M I PD T
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ VL+ CA L +G+ + E+I L D V +L+ MY+KCGS+Q+A VF +
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD+ W ++I Y+ + NEA++LF+ + E+R PD +L AC+ + G
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA---VDAIQGMPLDVQAQAWSCLLSA 237
+ + + G L D+ + G L LA D I L +W+ +++
Sbjct: 520 EIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL----VSWTVMIAG 574
Query: 238 CRIHG 242
+HG
Sbjct: 575 YGMHG 579
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 115/216 (53%), Gaps = 4/216 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y K + SAR++FD ++++SW S+I GY +G + L +F +M+ + I D AT
Sbjct: 239 FYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLAT 298
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +V + CAD +S G+ + + + +LL MYSKCG + A+ VF ++
Sbjct: 299 IVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D+ + +TSMI YA G+ EA+ LF +M EE I PD T++L C+ L+++G
Sbjct: 359 DRSVVSYTSMIAGYAREGLAGEAVKLFEEME-EEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 181 KFFKSMHE-DFGIAPTVKHYTCLADLLGRVGQLDLA 215
+ + + E D G V + L D+ + G + A
Sbjct: 418 RVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEA 451
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 10/226 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY C +L A R+FD + L W ++ A+SG + ++ LF++M+ + + D T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ V + + L S+ G+++ +I G V SL+ Y K + AR+VFD +T
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++D+ W S+IN Y +G+ + +++F +M V I D S+ C+ S L+ G
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLG- 315
Query: 181 KFFKSMHEDFGIAPTV----KHYTCLADLLGRVGQLDLAVDAIQGM 222
+++H G+ + L D+ + G LD A + M
Sbjct: 316 ---RAVH-SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 357
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 18 TAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKG 77
T +++ + + + +SG+ A+ L + DI P TL +VL CAD SL G
Sbjct: 56 TFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDP--RTLCSVLQLCADSKSLKDG 113
Query: 78 QEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIH 137
+E++ +I G +D + + L MY+ CG +++A VFD V + W ++N A
Sbjct: 114 KEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKS 173
Query: 138 GMGNEAINLFHKM 150
G + +I LF KM
Sbjct: 174 GDFSGSIGLFKKM 186
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 252 bits (644), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 188/307 (61%), Gaps = 3/307 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR--TDIRPDG 58
MYA+ + A +F +N++SW++MIA YA++G EAL FR M+R D P+
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T+ +VL ACA L +L +G+ I YI GLD V ++L+ MY +CG ++ + VFDR
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ D+D+ W S+I+ Y +HG G +AI +F +M + P + + S+L ACSH GLVE+
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM-LANGASPTPVTFVSVLGACSHEGLVEE 404
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
G + F++M D GI P ++HY C+ DLLGR +LD A +Q M + + W LL +C
Sbjct: 405 GKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
RIHGNVEL E A+ +L L P ++G+YVL+A++Y W E ++ L++ + L K G
Sbjct: 465 RIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPG 524
Query: 299 RSQVEVK 305
R +EV+
Sbjct: 525 RCWMEVR 531
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 7/247 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+ ++ AR++FD T + I W ++ +GH E L L+ +M R + D T
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180
Query: 61 LATVLSACA----DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
VL AC + L KG+EI ++ G + T+L+ MY++ G + A VF
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEER-IMPDAIVYTSILLACSHSGL 175
+ +++ W++MI CYA +G EA+ F +M E + P+++ S+L AC+
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300
Query: 176 VEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
+E G K G+ + + L + GR G+L++ M D +W+ L+
Sbjct: 301 LEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH-DRDVVSWNSLI 358
Query: 236 SACRIHG 242
S+ +HG
Sbjct: 359 SSYGVHG 365
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 10/218 (4%)
Query: 24 LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEY 83
+S +I + G +A+ R++ + P T ++ C SLS + +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 84 IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEA 143
I G D D + T L+ MYS GS+ AR+VFD+ + + +W ++ + G G E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 144 INLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDF---GIAPTVKHYT 200
+ L+ KM + D YT +L AC S + L K +H G + V T
Sbjct: 163 LGLYWKMN-RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221
Query: 201 CLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
L D+ R G +D A GMP+ +WS ++ AC
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI-AC 257
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 191/305 (62%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + A IF+ + ++I+SW SMI AQS +P+ A+D+FR+M + I D +
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++ LSACA+L S S G+ I ++ + L D +++L+ MY+KCG+++ A VF +
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK 604
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K++ W S+I HG +++ LFH+M + I PD I + I+ +C H G V++G+
Sbjct: 605 EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGV 664
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+FF+SM ED+GI P +HY C+ DL GR G+L A + ++ MP A W LL ACR+
Sbjct: 665 RFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRL 724
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H NVEL E+A++KL DL P +SG YVL++N + + +W+ +R+L+ +E+ K G S
Sbjct: 725 HKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYS 784
Query: 301 QVEVK 305
+E+
Sbjct: 785 WIEIN 789
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 130/247 (52%), Gaps = 9/247 (3%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y KC ++ A+ IF +++ +T+MI+GY +G ++L++FR +V+ I P+ TL
Sbjct: 385 YFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITL 444
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
++L L +L G+E+ +I G D + +++ MY+KCG + A E+F+R++
Sbjct: 445 VSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK 504
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+D+ W SMI A + AI++F +M V I D + ++ L AC++
Sbjct: 505 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG-ICYDCVSISAALSACAN----LPSES 559
Query: 182 FFKSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
F K++H +A V + L D+ + G L A++ + M + +W+ +++AC
Sbjct: 560 FGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAAC 618
Query: 239 RIHGNVE 245
HG ++
Sbjct: 619 GNHGKLK 625
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 94/167 (56%), Gaps = 1/167 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC A ++F + + + ++W MI+GY QSG E+L F M+ + + PD T
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+++L + + +L ++I YI + + LD + ++L+ Y KC + A+ +F +
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSIL 167
D+ ++T+MI+ Y +G+ +++ +F + V+ +I P+ I SIL
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMF-RWLVKVKISPNEITLVSIL 448
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Query: 13 RIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLG 72
++FD K+ + W M+ GYA+ G + F M I P+ T VLS CA
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 73 SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMIN 132
+ G ++ + + G+D + ++ SLL MYSKCG A ++F ++ D W MI+
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 133 CYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
Y G+ E++ F++M + ++PDAI ++S+L + S + L++ K +H
Sbjct: 314 GYVQSGLMEESLTFFYEM-ISSGVLPDAITFSSLLPSVSKF----ENLEYCKQIH 363
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 96/184 (52%), Gaps = 5/184 (2%)
Query: 1 MYAKCDNLTSARRIF---DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
MYA C + + ++F DL +I W S+I+ + ++G +AL + +M+ + PD
Sbjct: 79 MYAMCGSFSDCGKMFYRLDLRRS-SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPD 137
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
+T ++ AC L + + + + G+D ++ V +SL+ Y + G I ++FD
Sbjct: 138 VSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFD 197
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
RV KD IW M+N YA G + I F M +++ I P+A+ + +L C+ L++
Sbjct: 198 RVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ-ISPNAVTFDCVLSVCASKLLID 256
Query: 178 DGLK 181
G++
Sbjct: 257 LGVQ 260
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L+ +L AC++ L +G+++ ++ + + D +L MY+ CGS ++F R+
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 121 DKDLTI--WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
+ +I W S+I+ + +G+ N+A+ + KM + PD + ++ AC
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG-VSPDVSTFPCLVKAC 148
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 1/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC ++ + RR+FD K +++W ++I+GY+Q+G + L+L+ +M + + PD T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +VLS+CA LG+ G E+ + + G + V + + MY++CG++ KAR VFD +
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K L WT+MI CY +HGMG + LF M ++ I PD V+ +L ACSHSGL + GL
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDM-IKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F++M ++ + P +HY+CL DLLGR G+LD A++ I+ MP++ W LL AC+I
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H NV++ ELA AK+ + P + G YVLM+N+Y+ + +R ++ + K+ G S
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Query: 301 QVEVKA 306
VE K
Sbjct: 499 YVEHKG 504
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 5/249 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILS--WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDG 58
MY KC + AR++F+ + LS + ++I+GY + +A +FRRM T + D
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDS 156
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T+ ++ C L G+ + GLD + V S + MY KCGS++ R +FD
Sbjct: 157 VTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ K L W ++I+ Y+ +G+ + + L+ +M + PD S+L +C+H G +
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMK-SSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
G + K + E G P V + R G L A MP+ +W+ ++
Sbjct: 276 GHEVGK-LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCY 333
Query: 239 RIHGNVELG 247
+HG E+G
Sbjct: 334 GMHGMGEIG 342
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 7/164 (4%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
W + A +E++ L+R M+R+ PD + +L +CA L GQ++ ++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR-VTDKDLTI-WTSMINCYAIHGMGNEA 143
G + + V T+L+ MY KCG + AR+VF+ L++ + ++I+ Y + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 144 INLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
+F +M E + D++ ++ C+ V + L +S+H
Sbjct: 141 AYMFRRMK-ETGVSVDSVTMLGLVPLCT----VPEYLWLGRSLH 179
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 248 bits (633), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 190/304 (62%), Gaps = 1/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y+K + + SAR++FD + K++ SW +MI+GY Q+G +A+ LFR M +++ P+ T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +LSACA LG+LS G+ + + + + V T+L+ MY+KCGSI +AR +FD +T
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K+ W +MI+ Y +HG G EA+N+F++M + I P + + +L ACSH+GLV++G
Sbjct: 483 KKNEVTWNTMISGYGLHGQGQEALNIFYEM-LNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F SM +G P+VKHY C+ D+LGR G L A+ I+ M ++ + W LL ACRI
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H + L + KL +L P + G +VL++N++++ + +A +R ++L K G +
Sbjct: 602 HKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYT 661
Query: 301 QVEV 304
+E+
Sbjct: 662 LIEI 665
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 6/243 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y+KC + +F +I+++ +MI GY +G +L LF+ ++ + R +T
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +++ G L I Y V T+L +YSK I+ AR++FD
Sbjct: 325 LVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K L W +MI+ Y +G+ +AI+LF +M E P+ + T IL AC+ G + G
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE-FSPNPVTITCILSACAQLGALSLG- 439
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K+ + ++ T L + + G + A M + W+ ++S +
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV-TWNTMISGYGL 498
Query: 241 HGN 243
HG
Sbjct: 499 HGQ 501
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
MY K + AR++FD K+ + W +MI+GY ++ E++ +FR ++ R D
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
TL +L A A+L L G +I G V T + +YSKCG I+ +F
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKM 150
D+ + +MI+ Y +G +++LF ++
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKEL 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGATLATVLSACA 69
AR IF ++ + ++ G++ + P +L +F + + TD++P+ +T A +SA +
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 70 DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTS 129
G+ I + G D + + ++++ MY K ++ AR+VFDR+ +KD +W +
Sbjct: 131 GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNT 190
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
MI+ Y + M E+I +F + E D IL A +
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 248 bits (632), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 186/303 (61%), Gaps = 1/303 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
+ + ++ ARR+FDL ++ +W MI Y + G EALDLF +M + +RP +L
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
++LS CA L SL G+++ ++ D D V + L+ MY KCG + KA+ VFDR +
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS 394
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
KD+ +W S+I+ YA HG+G EA+ +FH+M MP+ + +IL ACS++G +E+GL+
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKIFHEMP-SSGTMPNKVTLIAILTACSYAGKLEEGLE 453
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
F+SM F + PTV+HY+C D+LGR GQ+D A++ I+ M + A W LL AC+ H
Sbjct: 454 IFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTH 513
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
++L E+AA KL + P ++G+YVL++++ S KW + ++R + + K G S
Sbjct: 514 SRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSW 573
Query: 302 VEV 304
+EV
Sbjct: 574 IEV 576
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 27/245 (11%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y K + AR +F+L +N++SWT+M+ GY Q G EA LF RM + +
Sbjct: 89 YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSW 144
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+ D G + K +++ + + + D T+++ + G + +AR +FD + +
Sbjct: 145 TVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMRE 200
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDA--IVYTSILLACSHSGLVEDG 179
+++ WT+MI Y + + A LF +MP+ + +TS+LL + SG +ED
Sbjct: 201 RNVVTWTTMITGYRQNNRVDVARKLFE-------VMPEKTEVSWTSMLLGYTLSGRIEDA 253
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADL--LGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+FF+ M P C A + G VG++ A M D W ++ A
Sbjct: 254 EEFFEVM-------PMKPVIACNAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMIKA 305
Query: 238 CRIHG 242
G
Sbjct: 306 YERKG 310
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC L A+ +FD + K+I+ W S+I+GYA G EAL +F M + P+ T
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434
Query: 61 LATVLSACADLGSLSKGQEIEEYI-YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
L +L+AC+ G L +G EI E + + + + + + M + G + KA E+ + +
Sbjct: 435 LIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM 494
Query: 120 TDK-DLTIWTSMINCYAIH 137
T K D T+W +++ H
Sbjct: 495 TIKPDATVWGALLGACKTH 513
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 23/248 (9%)
Query: 3 AKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLA 62
++ + AR+ FD K I SW S+++GY +G P EA LF M +
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN--------- 78
Query: 63 TVLSACADLGSLSKGQEIEEYIYLYGLDLDQQV--QTSLLHMYSKCGSIQKAREVFDRVT 120
V+S + K + I E ++ L ++ V T+++ Y + G + +A +F R+
Sbjct: 79 -VVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+++ WT M G ++A L+ M V+ D + T+++ G V++
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEAR 192
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
F M E V +T + + ++D+A + MP + +W+ +L +
Sbjct: 193 LIFDEMRER-----NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEV-SWTSMLLGYTL 246
Query: 241 HGNVELGE 248
G +E E
Sbjct: 247 SGRIEDAE 254
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 246 bits (628), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 193/305 (63%), Gaps = 1/305 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMV-RTDIRPDGAT 60
YAK N+ +AR +FD ++I+SW MI GYAQ G P +AL LF++++ +PD T
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ LSAC+ +G+L G+ I ++ + L+ +V T L+ MYSKCGS+++A VF+
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD+ W +MI YA+HG +A+ LF++M + P I + L AC+H+GLV +G+
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F+SM +++GI P ++HY CL LLGR GQL A + I+ M +D + WS +L +C++
Sbjct: 382 RIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKL 441
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HG+ LG+ A L L+ +SG YVL++N+Y S+G ++ +RNL+ K +VKE G S
Sbjct: 442 HGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIS 501
Query: 301 QVEVK 305
+E++
Sbjct: 502 TIEIE 506
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 37/272 (13%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YA + + +F T ++ +T+ I + +G +A L+ +++ ++I P+ T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+++L +C S G+ I ++ +GL +D V T L+ +Y+K G + A++VFDR+ +
Sbjct: 134 SSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 122 K-------------------------------DLTIWTSMINCYAIHGMGNEAINLFHKM 150
+ D+ W MI+ YA HG N+A+ LF K+
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 151 TVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVG 210
E + PD I + L ACS G +E G ++ + I VK T L D+ + G
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 211 QLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
L+ AV P AW+ +++ +HG
Sbjct: 309 SLEEAVLVFNDTPRK-DIVAWNAMIAGYAMHG 339
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGA 59
MY+KC +L A +F+ T K+I++W +MIAGYA G+ +AL LF M T ++P
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 362
Query: 60 TLATVLSACADLGSLSKGQEIEEYI-YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T L ACA G +++G I E + YG+ + L+ + + G +++A E
Sbjct: 363 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 422
Query: 119 VT-DKDLTIWTSMINCYAIHG 138
+ D D +W+S++ +HG
Sbjct: 423 MNMDADSVLWSSVLGSCKLHG 443
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 193/310 (62%), Gaps = 5/310 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + R+F + + W+++IAG Q+ ++AL LF+RM R D+ P+ AT
Sbjct: 363 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIAT 422
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L ++L A A L L + I Y+ G T L+H+YSKCG+++ A ++F+ +
Sbjct: 423 LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 121 DK----DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
+K D+ +W ++I+ Y +HG G+ A+ +F +M V + P+ I +TS L ACSHSGLV
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM-VRSGVTPNEITFTSALNACSHSGLV 541
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
E+GL F+ M E + HYTC+ DLLGR G+LD A + I +P + + W LL+
Sbjct: 542 EEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLA 601
Query: 237 ACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKE 296
AC H NV+LGE+AA KL +L P ++G+YVL+AN+Y +LG+WK+ +R++++ L K+
Sbjct: 602 ACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKK 661
Query: 297 CGRSQVEVKA 306
G S +E+++
Sbjct: 662 PGHSTIEIRS 671
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 17/267 (6%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY + AR +FD+ ++++SW +MI+GY ++G+ +AL +F MV + D AT
Sbjct: 161 MYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHAT 220
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ ++L C L L G+ + + + L +V+ +L++MY KCG + +AR VFDR+
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D+ WT MIN Y G A+ L M E + P+A+ S++ C + V DG
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALELCRLMQFEG-VRPNAVTIASLVSVCGDALKVNDG- 338
Query: 181 KFFKSMHEDFGIAPTVKHY------TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCL 234
K +H G A + Y T L + + ++DL G WS +
Sbjct: 339 ---KCLH---GWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSAI 391
Query: 235 LSACRIHGNVE--LGELAAAKLSDLSP 259
++ C + V LG + D+ P
Sbjct: 392 IAGCVQNELVSDALGLFKRMRREDVEP 418
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 122/246 (49%), Gaps = 5/246 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIR--PDGA 59
YA C ++T AR++F+ ++LS+ +I Y + G +A+ +F RMV ++ PDG
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T V A +L S+ G + I D+ VQ +LL MY G ++ AR+VFD +
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++D+ W +MI+ Y +G N+A+ +F M V E + D S+L C H +E G
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWM-VNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
K + E+ + ++ L ++ + G++D A M W+C+++
Sbjct: 238 RNVHK-LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR-DVITWTCMINGYT 295
Query: 240 IHGNVE 245
G+VE
Sbjct: 296 EDGDVE 301
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 118/246 (47%), Gaps = 5/246 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC + AR +FD +++++WT MI GY + G AL+L R M +RP+ T
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+A+++S C D ++ G+ + + + D ++TSL+ MY+KC + VF +
Sbjct: 322 IASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS 381
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
W+++I + + ++A+ LF +M E+ + P+ S+L A + + +
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED-VEPNIATLNSLLPAYAALADLRQAM 440
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ---AWSCLLSA 237
+ + G ++ T L + + G L+ A G+ +++ W L+S
Sbjct: 441 NIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISG 499
Query: 238 CRIHGN 243
+HG+
Sbjct: 500 YGMHGD 505
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 245 bits (626), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 186/305 (60%), Gaps = 3/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC A+ +F++ + K+I++W S+I+G++Q+G EAL LF RM + P+G T
Sbjct: 386 MYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQ--TSLLHMYSKCGSIQKAREVFDR 118
+A++ SACA LGSL+ G + Y G V T+LL Y+KCG Q AR +FD
Sbjct: 446 VASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT 505
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ +K+ W++MI Y G ++ LF +M ++++ P+ +TSIL AC H+G+V +
Sbjct: 506 IEEKNTITWSAMIGGYGKQGDTIGSLELFEEM-LKKQQKPNESTFTSILSACGHTGMVNE 564
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
G K+F SM++D+ P+ KHYTC+ D+L R G+L+ A+D I+ MP+ + + L C
Sbjct: 565 GKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGC 624
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
+H +LGE+ K+ DL P + YVL++NLY S G+W +A +RNL+ + L K G
Sbjct: 625 GMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAG 684
Query: 299 RSQVE 303
S +E
Sbjct: 685 HSTME 689
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 5/187 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + SA ++F+ +N++ WTSMIAGY ++ E L LF RM ++ + T
Sbjct: 185 MYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYT 244
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
T++ AC L +L +G+ + G++L + TSLL MY KCG I AR VF+ +
Sbjct: 245 YGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS 304
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
DL +WT+MI Y +G NEA++LF KM E I P+ + S+L C GL+E+ L
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIASVLSGC---GLIEN-L 359
Query: 181 KFFKSMH 187
+ +S+H
Sbjct: 360 ELGRSVH 366
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC ++++ARR+F+ + +++ WT+MI GY +G EAL LF++M +I+P+ T
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+A+VLS C + +L G+ + G+ D V +L+HMY+KC + A+ VF+ +
Sbjct: 346 IASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMES 404
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+KD+ W S+I+ ++ +G +EA+ LFH+M E + P+ + S+ AC+ G + G
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMN-SESVTPNGVTVASLFSACASLGSLAVGS 463
Query: 181 KFFK-SMHEDFGIAPTVKHYTCLADLLGRVG 210
S+ F + +V T L D + G
Sbjct: 464 SLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 3/205 (1%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACAD 70
AR +FD + W M+ Y + E + L+ +++ R D + L AC +
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 71 LGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSM 130
L L G++I + + D V T LL MY+KCG I+ A +VF+ +T +++ WTSM
Sbjct: 155 LQDLDNGKKIHCQL-VKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 131 INCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDF 190
I Y + + E + LF++M E ++ + Y ++++AC+ + G K+F
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMR-ENNVLGNEYTYGTLIMACTKLSALHQG-KWFHGCLVKS 271
Query: 191 GIAPTVKHYTCLADLLGRVGQLDLA 215
GI + T L D+ + G + A
Sbjct: 272 GIELSSCLVTSLLDMYVKCGDISNA 296
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKD 123
+LS C ++ SL + + + GL D + T L+ +Y G + AR VFD++ + D
Sbjct: 50 LLSKCTNIDSLRQSHGV---LTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 124 LTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFF 183
+W M+ CY ++ E + L+ + ++ D IV++ L AC+ +++G
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLY-DLLMKHGFRYDDIVFSKALKACTELQDLDNG---- 161
Query: 184 KSMHEDFGIAPTVKHY--TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
K +H P+ + T L D+ + G++ A + L W+ +++
Sbjct: 162 KKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIAG 216
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 195/308 (63%), Gaps = 3/308 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y+KC ++ AR++FD K+I++W S+++G+ Q+G EA+ +F +M + PD AT
Sbjct: 151 FYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSAT 210
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++LSACA G++S G + +YI GLDL+ ++ T+L+++YS+CG + KAREVFD++
Sbjct: 211 FVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK 270
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ ++ WT+MI+ Y HG G +A+ LF+KM + +P+ + + ++L AC+H+GLVE+G
Sbjct: 271 ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGR 330
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQA---WSCLLSA 237
+K M + + + P V+H+ C+ D+LGR G LD A I + +A A W+ +L A
Sbjct: 331 SVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390
Query: 238 CRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKEC 297
C++H N +LG A +L L P + G +V+++N+Y GK E +R+ + L K+
Sbjct: 391 CKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQV 450
Query: 298 GRSQVEVK 305
G S +EV+
Sbjct: 451 GYSVIEVE 458
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 119/217 (54%), Gaps = 3/217 (1%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
+ S+I ++ P + +RRM+ +++ P T +V+ +CADL +L G+ + +
Sbjct: 75 FNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAV 134
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAIN 145
+ G LD VQ +L+ YSKCG ++ AR+VFDR+ +K + W S+++ + +G+ +EAI
Sbjct: 135 VSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQ 194
Query: 146 LFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADL 205
+F++M E PD+ + S+L AC+ +G V G + + + G+ VK T L +L
Sbjct: 195 VFYQMR-ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVKLGTALINL 252
Query: 206 LGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
R G + A + M + AW+ ++SA HG
Sbjct: 253 YSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHG 288
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 191/305 (62%), Gaps = 2/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGA 59
MYAK + SAR +F+ +++SW ++I+GYAQ+G +EA++++ M +I +
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T +VL AC+ G+L +G ++ + GL LD V TSL MY KCG ++ A +F ++
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+ W ++I C+ HG G +A+ LF +M ++E + PD I + ++L ACSHSGLV++G
Sbjct: 513 PRVNSVPWNTLIACHGFHGHGEKAVMLFKEM-LDEGVKPDHITFVTLLSACSHSGLVDEG 571
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
F+ M D+GI P++KHY C+ D+ GR GQL+ A+ I+ M L A W LLSACR
Sbjct: 572 QWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACR 631
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+HGNV+LG++A+ L ++ P G +VL++N+Y S GKW+ +R++ GK L K G
Sbjct: 632 VHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGW 691
Query: 300 SQVEV 304
S +EV
Sbjct: 692 SSMEV 696
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 133/246 (54%), Gaps = 3/246 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YA+ L +++FD ++++SW S+I Y + P A+ LF+ M + I+PD T
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDL-DQQVQTSLLHMYSKCGSIQKAREVFDRV 119
L ++ S + LG + + ++ + G L D + +++ MY+K G + AR VF+ +
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+ D+ W ++I+ YA +G +EAI +++ M E I + + S+L ACS +G + G
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+K + ++ G+ V T LAD+ G+ G+L+ A+ +P V + W+ L++
Sbjct: 471 MKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHG 528
Query: 240 IHGNVE 245
HG+ E
Sbjct: 529 FHGHGE 534
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDL---FRRMVRTDIRPD 57
+Y++ + +AR +FD +++ SW +MI+GY QSG+ EAL L R M D
Sbjct: 194 LYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-------D 246
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T+ ++LSAC + G ++G I Y +GL+ + V L+ +Y++ G ++ ++VFD
Sbjct: 247 SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSI 166
R+ +DL W S+I Y ++ AI+LF +M + RI PD + S+
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL-SRIQPDCLTLISL 354
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 9/181 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFR-RMVRTDIRPDGA 59
+Y N+ AR FD +++ +W MI+GY ++G+ +E + F M+ + + PD
Sbjct: 95 LYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYR 154
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T +VL AC ++ G +I +G D V SL+H+YS+ ++ AR +FD +
Sbjct: 155 TFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+D+ W +MI+ Y G EA+ L + + R M D++ S+L AC+ +G G
Sbjct: 212 PVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RAM-DSVTVVSLLSACTEAGDFNRG 266
Query: 180 L 180
+
Sbjct: 267 V 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 5/151 (3%)
Query: 95 VQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE 154
+ L+++Y G++ AR FD + ++D+ W MI+ Y G +E I F +
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 155 RIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDL 214
+ PD + S+L AC V DG K + FG V L L R +
Sbjct: 148 GLTPDYRTFPSVLKACR---TVIDGNK-IHCLALKFGFMWDVYVAASLIHLYSRYKAVGN 203
Query: 215 AVDAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
A MP+ +W+ ++S GN +
Sbjct: 204 ARILFDEMPVR-DMGSWNAMISGYCQSGNAK 233
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 189/303 (62%), Gaps = 1/303 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + + +AR +FD ++++SW +MI+GY+ +G +A+++FR M + DIRP+ TL
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+VL A + LGSL G+ + Y G+ +D + ++L+ MYSKCG I+KA VF+R+
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+++ W++MIN +AIHG +AI+ F KM + + P + Y ++L ACSH GLVE+G +
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAYINLLTACSHGGLVEEGRR 396
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
+F M G+ P ++HY C+ DLLGR G LD A + I MP+ W LL ACR+
Sbjct: 397 YFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQ 456
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
GNVE+G+ A L D+ P SG+YV ++N+Y S G W E MR + K++ K+ G S
Sbjct: 457 GNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSL 516
Query: 302 VEV 304
+++
Sbjct: 517 IDI 519
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 51/284 (17%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAE--ALDLFRRMVRTD-IRPDGATLAT 63
+L A +IF+ +N SW ++I G+++S A+ LF M+ + + P+ T +
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQK------------ 111
VL ACA G + +G++I YG D+ V ++L+ MY CG ++
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 112 ---------------------------------AREVFDRVTDKDLTIWTSMINCYAIHG 138
AR +FD++ + + W +MI+ Y+++G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 139 MGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKH 198
+A+ +F +M + I P+ + S+L A S G +E G ++ ED GI
Sbjct: 254 FFKDAVEVFREMKKGD-IRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVL 311
Query: 199 YTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
+ L D+ + G ++ A+ + +P + WS +++ IHG
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHG 354
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC + A +F+ +N+++W++MI G+A G +A+D F +M + +RP
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 61 LATVLSACADLGSLSKGQE-IEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKARE-VFDR 118
+L+AC+ G + +G+ + + + GL+ + ++ + + G + +A E + +
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 119 VTDKDLTIWTSMINCYAIHG---MGNEAINLFHKMT 151
D IW +++ + G MG N+ M
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMV 473
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 244 bits (624), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 194/311 (62%), Gaps = 6/311 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-----IRP 56
YAK + AR++FD +N++SW+ +I GY G EALDLFR M +RP
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
+ T++TVLSAC LG+L +G+ + YI Y +++D + T+L+ MY+KCGS+++A+ VF
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 117 DRV-TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGL 175
+ + + KD+ +++MI C A++G+ +E LF +MT + I P+++ + IL AC H GL
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 176 VEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
+ +G +FK M E+FGI P+++HY C+ DL GR G + A I MP++ W LL
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 236 SACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVK 295
S R+ G+++ E A +L +L P +SG+YVL++N+Y G+W E +R+ ++ K + K
Sbjct: 378 SGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINK 437
Query: 296 ECGRSQVEVKA 306
G S VEV+
Sbjct: 438 VPGCSYVEVEG 448
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 36/236 (15%)
Query: 42 ALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLH 101
+ ++ RM + PD T +L + + L GQ I L+GLD D V+TSLL+
Sbjct: 46 PISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLN 105
Query: 102 MYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGN-------------------- 141
MYS CG ++ A+ VFD KDL W S++N YA G+ +
Sbjct: 106 MYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCL 165
Query: 142 -----------EAINLFHKMTV----EERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM 186
EA++LF +M + E + P+ +++L AC G +E G K+ +
Sbjct: 166 INGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KWVHAY 224
Query: 187 HEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
+ + + + T L D+ + G L+ A + +A+S ++ ++G
Sbjct: 225 IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 244 bits (623), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 188/306 (61%), Gaps = 1/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC A+++FD +N+++WT++IAGY QS + + +F M+++D+ P+ T
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L++VLSACA +G+L +G+ + Y+ ++++ T+L+ +Y KCG +++A VF+R+
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K++ WT+MIN +A HG +A +LF+ M + + P+ + + ++L AC+H GLVE+G
Sbjct: 369 EKNVYTWTAMINGFAAHGYARDAFDLFYTM-LSSHVSPNEVTFMAVLSACAHGGLVEEGR 427
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F SM F + P HY C+ DL GR G L+ A I+ MP++ W L +C +
Sbjct: 428 RLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLL 487
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H + ELG+ AA+++ L P SG Y L+ANLY+ W E +R + +++VK G S
Sbjct: 488 HKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFS 547
Query: 301 QVEVKA 306
+EVK
Sbjct: 548 WIEVKG 553
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 118/233 (50%), Gaps = 4/233 (1%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACAD 70
A R+FD K++++WT+MI G+ ++G +EA+ F M +T + + T+ +VL A
Sbjct: 157 ASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGK 216
Query: 71 LGSLSKGQEIEE-YIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTS 129
+ + G+ + Y+ + D + +SL+ MY KC A++VFD + +++ WT+
Sbjct: 217 VEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTA 276
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
+I Y ++ + +F +M ++ + P+ +S+L AC+H G + G + M ++
Sbjct: 277 LIAGYVQSRCFDKGMLVFEEM-LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKN 335
Query: 190 FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
I T L DL + G L+ A+ + + + W+ +++ HG
Sbjct: 336 -SIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-EKNVYTWTAMINGFAAHG 386
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 21/261 (8%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDL--FRRMVRTDIRPDGATLATVLSAC 68
ARR+ +I W S+I ++ L +R M R + P T +L A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 69 ADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWT 128
L S + +I +GLD D V+ SL+ YS G A +FD DKD+ WT
Sbjct: 115 FKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWT 173
Query: 129 SMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH- 187
+MI+ + +G +EA+ F +M + + + + S+L A +G VED ++F +S+H
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMK-KTGVAANEMTVVSVLKA---AGKVED-VRFGRSVHG 228
Query: 188 ---EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL-----SACR 239
E + V + L D+ G+ D A MP W+ L+ S C
Sbjct: 229 LYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALIAGYVQSRCF 287
Query: 240 IHGNVELGELAAAKLSDLSPG 260
G + E+ SD++P
Sbjct: 288 DKGMLVFEEMLK---SDVAPN 305
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 244 bits (623), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 179/305 (58%), Gaps = 1/305 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y K + A +F A KN +SWT+MI+GY Q+ EAL LF M +D+ PD +L
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
A LSACA LG+L +G+ I Y+ + +D + L+ MY+KCG +++A EVF +
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
K + WT++I+ YA HG G EAI+ F +M + I P+ I +T++L ACS++GLVE+G
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQ-KMGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
F SM D+ + PT++HY C+ DLLGR G LD A IQ MPL A W LL ACRIH
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
N+ELGE L + P G YV AN++ KW +A R L+ + + K G S
Sbjct: 430 KNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCST 489
Query: 302 VEVKA 306
+ ++
Sbjct: 490 ISLEG 494
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 37/283 (13%)
Query: 6 DNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVL 65
D L A+ +FD + W MI G++ S P +L L++RM+ + + T ++L
Sbjct: 63 DFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122
Query: 66 SACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKD-- 123
AC++L + + +I I G + D SL++ Y+ G+ + A +FDR+ + D
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 124 ------------------LTI-----------WTSMINCYAIHGMGNEAINLFHKMTVEE 154
LT+ WT+MI+ Y M EA+ LFH+M +
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 155 RIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDL 214
+ PD + + L AC+ G +E G K+ S I L D+ + G+++
Sbjct: 243 -VEPDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300
Query: 215 AVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDL 257
A++ + + QAW+ L+S HG+ G A +K ++
Sbjct: 301 ALEVFKNIK-KKSVQAWTALISGYAYHGH---GREAISKFMEM 339
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + A +F K++ +WT++I+GYA GH EA+ F M + I+P+ T
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLH------MYSKCGSIQKARE 114
VL+AC+ G + +G+ I Y ++ D ++ ++ H + + G + +A+
Sbjct: 351 FTAVLTACSYTGLVEEGKLI-----FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKR 405
Query: 115 VFDRVTDK-DLTIWTSMINCYAIH 137
+ K + IW +++ IH
Sbjct: 406 FIQEMPLKPNAVIWGALLKACRIH 429
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 244 bits (622), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YA+C ++ A+ +FD ++ +SW +MIAGY+QSGH EAL LF +M R R + ++
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
++ LS CAD+ +L G+++ + G + V +LL MY KCGSI++A ++F +
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 472
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
KD+ W +MI Y+ HG G A+ F M E + PD ++L ACSH+GLV+ G +
Sbjct: 473 KDIVSWNTMIAGYSRHGFGEVALRFFESMK-REGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
+F +M +D+G+ P +HY C+ DLLGR G L+ A + ++ MP + A W LL A R+H
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
GN EL E AA K+ + P +SG YVL++NLY S G+W + +R + K + K G S
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSW 651
Query: 302 VEVK 305
+E++
Sbjct: 652 IEIQ 655
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC ++ A +F AGK+I+SW +MIAGY++ G AL F M R ++PD AT
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 61 LATVLSACADLGSLSKGQEIEEYIYL----YGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
+ VLSAC+ G + KG+ +Y Y YG+ + Q ++ + + G ++ A +
Sbjct: 513 MVAVLSACSHTGLVDKGR---QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM 569
Query: 117 DRVT-DKDLTIWTSMINCYAIHG 138
+ + D IW +++ +HG
Sbjct: 570 KNMPFEPDAAIWGTLLGASRVHG 592
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
+ K + AR+ FD ++++SW ++I GYAQSG EA LF D + +
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----------DESPV 278
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGL--DLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
V + A + + + +EE L+ + ++ ++L Y + ++ A+E+FD +
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++++ W +MI YA G +EA NLF KM D + + +++ S SG +
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR-----DPVSWAAMIAGYSQSGHSFEA 393
Query: 180 LKFFKSMHEDFG 191
L+ F M + G
Sbjct: 394 LRLFVQMEREGG 405
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 33/263 (12%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + NL AR +F++ +++ SW +M++GYAQ+G +A +F RM P+
Sbjct: 136 YVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM------PE---- 185
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQT--SLLHMYSKCGSIQKAREVFDRV 119
+S A L + + ++EE L+ + + + LL + K I +AR+ FD +
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+D+ W ++I YA G +EA LF + V+ D +T+++ + +VE+
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ-----DVFTWTAMVSGYIQNRMVEEA 300
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVG--QLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+ F M P + A L G V ++++A + MP W+ +++
Sbjct: 301 RELFDKM-------PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMIT- 351
Query: 238 CRIHGNVELGELAAAK-LSDLSP 259
G + G+++ AK L D P
Sbjct: 352 ----GYAQCGKISEAKNLFDKMP 370
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 129/318 (40%), Gaps = 54/318 (16%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + A R+F + +S+ MI+GY ++G A LF M D+ +
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL----VSW 129
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
++ +L K +E+ E + + D ++L Y++ G + AR VFDR+ +
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLF--------------------HKMTVEERI----- 156
K+ W ++++ Y + EA LF K VE R
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 157 -MPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQ--LD 213
+ D + + +I+ + SG +++ + F +P +T A + G + ++
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDE-------SPVQDVFTWTAMVSGYIQNRMVE 298
Query: 214 LAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAK-LSDLSPGSS-GSYVLMANL 271
A + MP + +W+ +L+ G V+ + AK L D+ P + ++ M
Sbjct: 299 EARELFDKMP-ERNEVSWNAMLA-----GYVQGERMEMAKELFDVMPCRNVSTWNTMITG 352
Query: 272 YTSLGKWKEAHIMRNLID 289
Y GK EA +NL D
Sbjct: 353 YAQCGKISEA---KNLFD 367
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 114/241 (47%), Gaps = 29/241 (12%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQ-EI 80
+I W I+ Y ++G EAL +F+RM R ++V G L G+ E+
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPR---------WSSVSYNGMISGYLRNGEFEL 113
Query: 81 EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMG 140
++ + D ++ Y + ++ KARE+F+ + ++D+ W +M++ YA +G
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
++A ++F +M + + + + ++L A + +E+ FKS E++ + +
Sbjct: 174 DDARSVFDRMPEK-----NDVSWNALLSAYVQNSKMEEACMLFKS-RENWALVS----WN 223
Query: 201 CLADLLGRVGQLDLAVDAIQGM-PLDVQ-AQAWSCLLSACRIHGNVELGELAAAKLSDLS 258
C LLG + V+A Q ++V+ +W+ +++ G ++ A +L D S
Sbjct: 224 C---LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKID----EARQLFDES 276
Query: 259 P 259
P
Sbjct: 277 P 277
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 243 bits (621), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 178/306 (58%), Gaps = 1/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC L A+ +FD KN++SWT+M+ GY Q+G EA+ +F M R+ I PD T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +SACA++ SL +G + GL V SL+ +Y KCG I + +F+ +
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D WT+M++ YA G E I LF KM V+ + PD + T ++ ACS +GLVE G
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKM-VQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++FK M ++GI P++ HY+C+ DL R G+L+ A+ I GMP A W+ LLSACR
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
GN+E+G+ AA L +L P Y L++++Y S GKW +R + K + KE G+S
Sbjct: 553 KGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQS 612
Query: 301 QVEVKA 306
++ K
Sbjct: 613 WIKWKG 618
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 21 KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEI 80
K+ +SW +MI G AQ+G EA++ FR M ++ D +VL AC LG++++G++I
Sbjct: 233 KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQI 292
Query: 81 EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMG 140
I V ++L+ MY KC + A+ VFDR+ K++ WT+M+ Y G
Sbjct: 293 HACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRA 352
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
EA+ +F M I PD + AC++ +E+G +F I + HY
Sbjct: 353 EEAVKIFLDMQ-RSGIDPDHYTLGQAISACANVSSLEEGSQFHGK-----AITSGLIHYV 406
Query: 201 CLAD----LLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+++ L G+ G +D + M + A +W+ ++SA
Sbjct: 407 TVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD--GA 59
Y+K ++ F+ ++ ++W +I GY+ SG A+ + M+R D +
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR-DFSANLTRV 140
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
TL T+L + G +S G++I + G + V + LL+MY+ G I A++VF +
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
D++ ++ S++ GM +A+ LF M D++ + +++ + +GL ++
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGME------KDSVSWAAMIKGLAQNGLAKEA 254
Query: 180 LKFFKSM 186
++ F+ M
Sbjct: 255 IECFREM 261
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 181/298 (60%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
+ ARR+FD +N SW ++I + ++G EALDLF M + +RP TL ++LS
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
CA L SL G+++ + D+D V + L+ MY KCG + K++ +FDR KD+ +W
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
S+I+ YA HG+G EA+ +F +M + P+ + + + L ACS++G+VE+GLK ++SM
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Query: 188 EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELG 247
FG+ P HY C+ D+LGR G+ + A++ I M ++ A W LL ACR H +++
Sbjct: 461 SVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA 520
Query: 248 ELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEVK 305
E A KL ++ P +SG+Y+L++N+Y S G+W + +R L+ + + K G S EV+
Sbjct: 521 EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVE 578
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 100/189 (52%), Gaps = 21/189 (11%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y K + AR++FDL +N++SWT+++ GY +G A LF +M P+ +
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKV 142
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGL--DLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ + +G L G+ I++ LY + D D +TS++H K G + +ARE+FD +
Sbjct: 143 SWTVML---IGFLQDGR-IDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDA--IVYTSILLACSHSGLVE 177
+++ + WT+M+ Y + ++A +F +MP+ + +TS+L+ +G +E
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFD-------VMPEKTEVSWTSMLMGYVQNGRIE 251
Query: 178 DGLKFFKSM 186
D + F+ M
Sbjct: 252 DAEELFEVM 260
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM-VRTDIRPDGA 59
MY KC L ++ IFD K+I+ W S+I+GYA G EAL +F M + +P+
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 60 TLATVLSACADLGSLSKGQEIEEYI-YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T LSAC+ G + +G +I E + ++G+ ++ M + G +A E+ D
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 119 VT-DKDLTIWTSMINCYAIH 137
+T + D +W S++ H
Sbjct: 495 MTVEPDAAVWGSLLGACRTH 514
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 27/250 (10%)
Query: 3 AKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLA 62
++ + AR++FD K+I SW SM+AGY + P +A LF M PD
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PD----R 77
Query: 63 TVLSACADLGSLSKGQEIEEYIYLYGLDLDQQV--QTSLLHMYSKCGSIQKAREVFDRVT 120
++S + K EI+E ++ L ++ V T+L+ Y G + A +F ++
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDA--IVYTSILLACSHSGLVED 178
+K+ WT M+ + G ++A L+ ++PD I TS++ G V++
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYE-------MIPDKDNIARTSMIHGLCKEGRVDE 190
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
+ F M E +V +T + G+ ++D A MP + +W+ +L
Sbjct: 191 AREIFDEMSER-----SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV-SWTSMLMGY 244
Query: 239 RIHGNVELGE 248
+G +E E
Sbjct: 245 VQNGRIEDAE 254
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLA--TVLSAC 68
AR IFD + +++++WT+M+ GY Q+ +A +F D+ P+ ++ ++L
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTSMLMGY 244
Query: 69 ADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWT 128
G + +E+ E + + + +++ + G I KAR VFD + +++ W
Sbjct: 245 VQNGRIEDAEELFEVMPVKPV----IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQ 300
Query: 129 SMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
++I + +G EA++LF M ++ + P SIL C+
Sbjct: 301 TVIKIHERNGFELEALDLFILMQ-KQGVRPTFPTLISILSVCA 342
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 187/315 (59%), Gaps = 13/315 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM----------- 49
MY++ + A RIF +++++W +MI GY S H +AL L +M
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 508
Query: 50 VRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSI 109
R ++P+ TL T+L +CA L +L+KG+EI Y L D V ++L+ MY+KCG +
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568
Query: 110 QKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLA 169
Q +R+VFD++ K++ W +I Y +HG G EAI+L M V+ + P+ + + S+ A
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG-VKPNEVTFISVFAA 627
Query: 170 CSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDV-QA 228
CSHSG+V++GL+ F M D+G+ P+ HY C+ DLLGR G++ A + MP D +A
Sbjct: 628 CSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKA 687
Query: 229 QAWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLI 288
AWS LL A RIH N+E+GE+AA L L P + YVL+AN+Y+S G W +A +R +
Sbjct: 688 GAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNM 747
Query: 289 DGKELVKECGRSQVE 303
+ + KE G S +E
Sbjct: 748 KEQGVRKEPGCSWIE 762
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGA 59
MY C + S RR+FD + I W +MIAGY+Q+ H EAL LF M + + +
Sbjct: 347 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 406
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T+A V+ AC G+ S+ + I ++ GLD D+ VQ +L+ MYS+ G I A +F ++
Sbjct: 407 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEER----------IMPDAIVYTSILLA 169
D+DL W +MI Y +A+ L HKM ER + P++I +IL +
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526
Query: 170 CSHSGLVEDGLKFFKSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDV 226
C+ + G K +H +A V + L D+ + G L ++ +P
Sbjct: 527 CAALSALAKG----KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QK 581
Query: 227 QAQAWSCLLSACRIHGN 243
W+ ++ A +HGN
Sbjct: 582 NVITWNVIIMAYGMHGN 598
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 13/243 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K L S++ + G+++++W ++++ Q+ EAL+ R MV + PD T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYG-LDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+++VL AC+ L L G+E+ Y G LD + V ++L+ MY C + R VFD +
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE-- 177
D+ + +W +MI Y+ + EA+ LF M ++ ++ ++ AC SG
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 178 ---DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCL 234
G + + D + T L D+ R+G++D+A+ I G D W+ +
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNT------LMDMYSRLGKIDIAM-RIFGKMEDRDLVTWNTM 477
Query: 235 LSA 237
++
Sbjct: 478 ITG 480
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 96/182 (52%), Gaps = 5/182 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y KC + + ++FD + +N +SW S+I+ AL+ FR M+ ++ P T
Sbjct: 142 LYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 201
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGL---DLDQQVQTSLLHMYSKCGSIQKAREVFD 117
L +V++AC++L + +G + + ++ YGL +L+ + +L+ MY K G + ++ +
Sbjct: 202 LVSVVTACSNL-PMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLG 260
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+DL W ++++ + EA+ +M +E + PD +S+L ACSH ++
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLR 319
Query: 178 DG 179
G
Sbjct: 320 TG 321
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
W ++ +S EA+ + M+ I+PD +L A ADL + G++I ++Y
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 86 LYGLDLDQ-QVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAI 144
+G +D V +L+++Y KCG +VFDR+++++ W S+I+ A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 145 NLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
F M ++E + P + S++ ACS+ + E GL K +H
Sbjct: 185 EAFRCM-LDENVEPSSFTLVSVVTACSNLPMPE-GLMMGKQVH 225
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/314 (41%), Positives = 187/314 (59%), Gaps = 18/314 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGK--NILSWTSMIAGYAQSGHPAEALDLFRRMVRTD--IRP 56
MYAKC + +AR +FD + K ++++WT MI GY+Q G +AL+L M D RP
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ-----VQTSLLHMYSKCGSIQK 111
+ T++ L ACA L +L G++I + Y L Q V L+ MY+KCGSI
Sbjct: 476 NAFTISCALVACASLAALRIGKQI----HAYALRNQQNAVPLFVSNCLIDMYAKCGSISD 531
Query: 112 AREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERI--MPDAIVYTSILLA 169
AR VFD + K+ WTS++ Y +HG G EA+ +F +M RI D + +L A
Sbjct: 532 ARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM---RRIGFKLDGVTLLVVLYA 588
Query: 170 CSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ 229
CSHSG+++ G+++F M FG++P +HY CL DLLGR G+L+ A+ I+ MP++
Sbjct: 589 CSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPV 648
Query: 230 AWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLID 289
W LS CRIHG VELGE AA K+++L+ GSY L++NLY + G+WK+ +R+L+
Sbjct: 649 VWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMR 708
Query: 290 GKELVKECGRSQVE 303
K + K G S VE
Sbjct: 709 HKGVKKRPGCSWVE 722
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGA 59
MY++C +L+ AR++FD + +++SW S+I YA+ G P AL++F RM RPD
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI 230
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
TL VL CA LG+ S G+++ + + + V L+ MY+KCG + +A VF +
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+ KD+ W +M+ Y+ G +A+ LF KM EE+I D + +++ + + GL +
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQ-EEKIKMDVVTWSAAISGYAQRGLGYEA 349
Query: 180 LKFFKSMHEDFGIAPT 195
L + M GI P
Sbjct: 350 LGVCRQMLSS-GIKPN 364
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 127/255 (49%), Gaps = 15/255 (5%)
Query: 2 YAKCDNLTSARRIFDLTAGKNI----LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
Y++ A R+F+ + I ++W++ I+GYAQ G EAL + R+M+ + I+P+
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDL-------DQQVQTSLLHMYSKCGSIQ 110
TL +VLS CA +G+L G+EI Y Y +DL + V L+ MY+KC +
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 111 KAREVFDRVTDK--DLTIWTSMINCYAIHGMGNEAINLFHKMTVEE-RIMPDAIVYTSIL 167
AR +FD ++ K D+ WT MI Y+ HG N+A+ L +M E+ + P+A + L
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 168 LACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQ 227
+AC+ + G + + A + CL D+ + G + A M +
Sbjct: 485 VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKN 543
Query: 228 AQAWSCLLSACRIHG 242
W+ L++ +HG
Sbjct: 544 EVTWTSLMTGYGMHG 558
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 10/237 (4%)
Query: 12 RRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADL 71
RR AG + W S+I Y +G + L LF M PD T V AC ++
Sbjct: 83 RRFPPSDAG--VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI 140
Query: 72 GSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMI 131
S+ G+ + G + V +L+ MYS+C S+ AR+VFD ++ D+ W S+I
Sbjct: 141 SSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSII 200
Query: 132 NCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFG 191
YA G A+ +F +MT E PD I ++L C+ G G K +H
Sbjct: 201 ESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG----KQLHCFAV 256
Query: 192 IAPTVKHY---TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
+ +++ CL D+ + G +D A M + +W+ +++ G E
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFE 312
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 2/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+K ++ SAR +FD+ + +SWT MI+GYA+ G EAL LF M+++ +PD T
Sbjct: 300 MYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQ-QVQTSLLHMYSKCGSIQKAREVFDRV 119
L +++S C GSL G+ I+ +YG D + +L+ MYSKCGSI +AR++FD
Sbjct: 360 LLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT 419
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+K + WT+MI YA++G+ EA+ LF KM ++ P+ I + ++L AC+HSG +E G
Sbjct: 420 PEKTVVTWTTMIAGYALNGIFLEALKLFSKM-IDLDYKPNHITFLAVLQACAHSGSLEKG 478
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
++F M + + I+P + HY+C+ DLLGR G+L+ A++ I+ M A W LL+AC+
Sbjct: 479 WEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACK 538
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
IH NV++ E AA L +L P + YV MAN+Y + G W +R+++ + + K G
Sbjct: 539 IHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGE 598
Query: 300 SQVEVK 305
S ++V
Sbjct: 599 SVIQVN 604
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 6/244 (2%)
Query: 2 YAKCDNLTSARRIFDLT--AGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
Y KC +L SA+ +F+ + ++SW SM Y+ G +A L+ M+R + +PD +
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T + ++C + +L++G+ I + G D D + + + MYSK AR +FD +
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
T + WT MI+ YA G +EA+ LFH M ++ PD + S++ C G +E G
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAM-IKSGEKPDLVTLLSLISGCGKFGSLETG 376
Query: 180 LKFFKSMHEDFGIA-PTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
K+ + + +G V L D+ + G + A D P + W+ +++
Sbjct: 377 -KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGY 434
Query: 239 RIHG 242
++G
Sbjct: 435 ALNG 438
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
M+ KC+++ A ++F+ ++ +W +M++G+ QSGH +A LFR M +I PD T
Sbjct: 96 MFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVT 155
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ T++ + + SL + + G+D+ V + + Y KCG + A+ VF+ +
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 121 DKDLTI--WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
D T+ W SM Y++ G +A L+ M EE PD + ++ +C + +
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE-FKPDLSTFINLAASCQNPETLTQ 274
Query: 179 G 179
G
Sbjct: 275 G 275
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 9/235 (3%)
Query: 12 RRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADL 71
RR++ ++ ++ +W I P E+L LFR M R P+ T V ACA L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 72 GSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMI 131
+ + + ++ D V T+ + M+ KC S+ A +VF+R+ ++D T W +M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 132 NCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHE--- 188
+ + G ++A +LF +M + E I PD++ +++ + S E LK ++MH
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNE-ITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGI 180
Query: 189 DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPL-DVQAQAWSCLLSACRIHG 242
G+ V G+ G LD A + + D +W+ + A + G
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 187/305 (61%), Gaps = 2/305 (0%)
Query: 2 YAKCDNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y K + A +F D+T KN+++W +MI+GY ++ P + L LFR M+ IRP+ +
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L++ L C++L +L G++I + + L D TSL+ MY KCG + A ++F+ +
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD+ W +MI+ YA HG ++A+ LF +M ++ +I PD I + ++LLAC+H+GLV G+
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREM-IDNKIRPDWITFVAVLLACNHAGLVNIGM 405
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F+SM D+ + P HYTC+ DLLGR G+L+ A+ I+ MP A + LL ACR+
Sbjct: 406 AYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRV 465
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H NVEL E AA KL L+ ++ YV +AN+Y S +W++ +R + +VK G S
Sbjct: 466 HKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYS 525
Query: 301 QVEVK 305
+E++
Sbjct: 526 WIEIR 530
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC L A ++F++ K++++W +MI+GYAQ G+ +AL LFR M+ IRPD T
Sbjct: 328 MYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Query: 61 LATVLSACADLGSLSKGQE-IEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKA 112
VL AC G ++ G E + Y ++ T ++ + + G +++A
Sbjct: 388 FVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEA 440
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 18/248 (7%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + N A+ FD K+ SW +MI GYA+ G +A +LF M+ + +
Sbjct: 134 YVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSW 189
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF-DRVT 120
++S + G L K + + G+ T+++ Y K ++ A +F D
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKKVELAEAMFKDMTV 245
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K+L W +MI+ Y + + + LF M +EE I P++ +S LL CS ++ G
Sbjct: 246 NKNLVTWNAMISGYVENSRPEDGLKLFRAM-LEEGIRPNSSGLSSALLGCSELSALQLG- 303
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLG---RVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+ +H+ + T L L+ + G+L A + M AW+ ++S
Sbjct: 304 ---RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISG 359
Query: 238 CRIHGNVE 245
HGN +
Sbjct: 360 YAQHGNAD 367
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 188/337 (55%), Gaps = 36/337 (10%)
Query: 3 AKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGH----------------PA------ 40
+ ++T AR++FD + +N++SWT+M++GYA+SG P+
Sbjct: 173 SSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILA 232
Query: 41 ---------EALDLFRRMVR-TDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLD 90
EA+ LFRRM+ IRP+ T+ VLSACA G+L + I + Y L
Sbjct: 233 ACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLS 292
Query: 91 LDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFH-- 148
D V SL+ +Y KCG++++A VF + K LT W SMINC+A+HG EAI +F
Sbjct: 293 SDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM 352
Query: 149 -KMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLG 207
K+ + + I PD I + +L AC+H GLV G +F M FGI P ++HY CL DLLG
Sbjct: 353 MKLNIND-IKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLG 411
Query: 208 RVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVL 267
R G+ D A++ + M + W LL+AC+IHG+++L E+A L L+P + G +
Sbjct: 412 RAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAM 471
Query: 268 MANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEV 304
MANLY +G W+EA R +I + K G S++E+
Sbjct: 472 MANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEI 508
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 9/213 (4%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSG--HPAEALDLFRRMV-RTDIRPDGATLAT 63
NL+ AR IFD + N + +++ Y+ S H + A FR MV R+ RP+
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMY-SKCGSIQKAREVFDRVTDK 122
VL + L S + +++ G L VQT+LLH Y S I AR++FD ++++
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 123 DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKF 182
++ WT+M++ YA G + A+ LF M ER +P + +IL AC+ +GL + +
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDM--PERDVPS---WNAILAACTQNGLFLEAVSL 246
Query: 183 FKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
F+ M + I P C+ + G L LA
Sbjct: 247 FRRMINEPSIRPNEVTVVCVLSACAQTGTLQLA 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR---TDIRPD 57
+Y KC NL A +F + + K++ +W SMI +A G EA+ +F M++ DI+PD
Sbjct: 304 LYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPD 363
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
T +L+AC G +SKG+ + + +G++ + L+ + + G +A EV
Sbjct: 364 HITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVM 423
Query: 117 DRVTDK-DLTIWTSMINCYAIHG 138
+ K D IW S++N IHG
Sbjct: 424 STMKMKADEAIWGSLLNACKIHG 446
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 183/304 (60%), Gaps = 1/304 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YA+ + A+ +F L K I+SWT+MI+GY G EA+D FR M I PD +L
Sbjct: 185 YARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISL 244
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+VL +CA LGSL G+ I Y G V +L+ MYSKCG I +A ++F ++
Sbjct: 245 ISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEG 304
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
KD+ W++MI+ YA HG + AI F++M ++ P+ I + +L ACSH G+ ++GL+
Sbjct: 305 KDVISWSTMISGYAYHGNAHGAIETFNEMQ-RAKVKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
+F M +D+ I P ++HY CL D+L R G+L+ AV+ + MP+ ++ W LLS+CR
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTP 423
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
GN+++ +A L +L P G+YVL+AN+Y LGKW++ +R +I + + K G S
Sbjct: 424 GNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSL 483
Query: 302 VEVK 305
+EV
Sbjct: 484 IEVN 487
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 132/314 (42%), Gaps = 42/314 (13%)
Query: 4 KCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIR-PDGATLA 62
K +++ A R+F+ + N+ + S+I Y + + + ++++++R PD T
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFP 113
Query: 63 TVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK 122
+ +CA LGS G+++ ++ +G + +L+ MY K + A +VFD + ++
Sbjct: 114 FMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER 173
Query: 123 DLTIWTSMINCYAIHGMGNEAINLFHKMT--------------------VEER------- 155
D+ W S+++ YA G +A LFH M VE
Sbjct: 174 DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQ 233
Query: 156 ---IMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQL 212
I PD I S+L +C+ G +E G K+ E G L ++ + G +
Sbjct: 234 LAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVI 292
Query: 213 DLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVE-----LGELAAAKLSDLSPGSSGSYVL 267
A+ M +WS ++S HGN E+ AK+ + +++
Sbjct: 293 SQAIQLFGQME-GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKP----NGITFLG 347
Query: 268 MANLYTSLGKWKEA 281
+ + + +G W+E
Sbjct: 348 LLSACSHVGMWQEG 361
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 91/174 (52%), Gaps = 13/174 (7%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC ++ A ++F GK+++SW++MI+GYA G+ A++ F M R ++P+G T
Sbjct: 285 MYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLH------MYSKCGSIQKARE 114
+LSAC+ +G +G Y + D Q++ + H + ++ G +++A E
Sbjct: 345 FLGLLSACSHVGMWQEGLR-----YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVE 399
Query: 115 VFDRVTDK-DLTIWTSMI-NCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSI 166
+ + K D IW S++ +C + + + H + +E M + ++ +I
Sbjct: 400 ITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANI 453
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 241 bits (614), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 180/303 (59%), Gaps = 2/303 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YA+ N+ A +F+ K++++WT+M+ G+AQ+ P EAL+ F RM ++ IR D T+
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQV--QTSLLHMYSKCGSIQKAREVFDRV 119
A +SACA LG+ + G V ++L+ MYSKCG++++A VF +
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+K++ ++SMI A HG EA++LFH M + I P+ + + L+ACSHSGLV+ G
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ F SM++ FG+ PT HYTC+ DLLGR G+L A++ I+ M ++ W LL ACR
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACR 464
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
IH N E+ E+AA L +L P G+Y+L++N+Y S G W +R LI K L K
Sbjct: 465 IHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAV 524
Query: 300 SQV 302
S V
Sbjct: 525 SWV 527
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 9/213 (4%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACAD 70
ARR+ + +N WT++I GYA G EA+ ++ M + +I P T + +L AC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 71 LGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSM 130
+ L+ G++ + V +++ MY KC SI AR+VFD + ++D+ WT +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 131 INCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDF 190
I YA G A LF + + D + +T+++ + + ++ L++F M E
Sbjct: 222 IAAYARVGNMECAAELFESLPTK-----DMVAWTAMVTGFAQNAKPQEALEYFDRM-EKS 275
Query: 191 GIAP---TVKHYTCLADLLGRVGQLDLAVDAIQ 220
GI TV Y LG D AV Q
Sbjct: 276 GIRADEVTVAGYISACAQLGASKYADRAVQIAQ 308
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 183/299 (61%), Gaps = 1/299 (0%)
Query: 6 DNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVL 65
+N+ + +F K+++SW MI Y ++ P EA++L+ RM PD ++ +VL
Sbjct: 257 ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 66 SACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT 125
AC D +LS G++I YI L + ++ +L+ MY+KCG ++KAR+VF+ + +D+
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Query: 126 IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKS 185
WT+MI+ Y G G +A+ LF K+ + ++PD+I + + L ACSH+GL+E+G FK
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQ-DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435
Query: 186 MHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
M + + I P ++H C+ DLLGR G++ A IQ M ++ + W LL ACR+H + +
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495
Query: 246 LGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEV 304
+G LAA KL L+P SG YVL++N+Y G+W+E +RN++ K L K G S VEV
Sbjct: 496 IGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEV 554
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 3/190 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YA ++ SAR++FD +N++ MI Y +G E + +F M ++RPD T
Sbjct: 84 YASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTF 143
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
VL AC+ G++ G++I GL V L+ MY KCG + +AR V D ++
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+D+ W S++ YA + ++A+ + +M +I DA S+L A S++ + +
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREME-SVKISHDAGTMASLLPAVSNT--TTENVM 260
Query: 182 FFKSMHEDFG 191
+ K M G
Sbjct: 261 YVKDMFFKMG 270
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC L+ AR + D + ++++SW S++ GYAQ+ +AL++ R M I D T
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+A++L A ++ + E +Y+ +++F ++
Sbjct: 244 MASLLPAVSNTTT-------ENVMYV--------------------------KDMFFKMG 270
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K L W MI Y + M EA+ L+ +M + PDA+ TS+L AC + + G
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG-FEPDAVSITSVLPACGDTSALSLGK 329
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
K + E + P + L D+ + G L+ A D + M +W+ ++SA
Sbjct: 330 KIHGYI-ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMISA 384
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC L AR +F+ ++++SWT+MI+ Y SG +A+ LF ++ + + PD
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412
Query: 61 LATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKA-REVFDR 118
T L+AC+ G L +G+ + + Y + + ++ + + G +++A R + D
Sbjct: 413 FVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM 472
Query: 119 VTDKDLTIWTSMINCYAIH 137
+ + +W +++ +H
Sbjct: 473 SMEPNERVWGALLGACRVH 491
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 187/306 (61%), Gaps = 1/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY +C L SA IFD A KN++SW S+IA Y Q+G AL+LF+ + + + PD T
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+A++L A A+ SLS+G+EI YI + + SL+HMY+ CG ++ AR+ F+ +
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD+ W S+I YA+HG G ++ LF +M + R+ P+ + S+L ACS SG+V++G
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWLFSEM-IASRVNPNKSTFASLLAACSISGMVDEGW 552
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++F+SM ++GI P ++HY C+ DL+GR G A ++ MP A+ W LL+A R
Sbjct: 553 EYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRN 612
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H ++ + E AA ++ + ++G YVL+ N+Y G+W++ + ++ L++ K + + RS
Sbjct: 613 HKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRS 672
Query: 301 QVEVKA 306
VE K
Sbjct: 673 TVEAKG 678
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 7/238 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y K A ++F+ ++I+SW SMI+GY G +L LF+ M++ +PD +
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDL-DQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ L AC+ + S G+EI + ++ D V TS+L MYSK G + A +F+ +
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+++ W MI CYA +G +A F KM+ + + PD I ++L A S ++E
Sbjct: 294 IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SAILEGR 350
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+M G P + T L D+ G GQL A + I + +W+ +++A
Sbjct: 351 TIHGYAMRR--GFLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAA 405
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 121/243 (49%), Gaps = 8/243 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
MY+K ++ A RIF+ +NI++W MI YA++G +A F++M + ++PD
Sbjct: 276 MYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 335
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T +L A A L +G+ I Y G ++T+L+ MY +CG ++ A +FDR+
Sbjct: 336 TSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+K++ W S+I Y +G A+ LF ++ + ++PD+ SIL A + S + +G
Sbjct: 392 AEKNVISWNSIIAAYVQNGKNYSALELFQELW-DSSLVPDSTTIASILPAYAESLSLSEG 450
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ + + + T+ L + G L+ A + L +W+ ++ A
Sbjct: 451 REIHAYIVKSRYWSNTII-LNSLVHMYAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYA 508
Query: 240 IHG 242
+HG
Sbjct: 509 VHG 511
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 2/255 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
+A + A ++FD + W MI G+ G EA+ + RMV ++ D T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
V+ + A + SL +G++I + G D V SL+ +Y K G A +VF+ + +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+D+ W SMI+ Y G G ++ LF +M ++ PD S L ACSH + G +
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEM-LKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
V T + D+ + G++ A GM + AW+ ++ +
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYARN 311
Query: 242 GNVELGELAAAKLSD 256
G V L K+S+
Sbjct: 312 GRVTDAFLCFQKMSE 326
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 180/304 (59%), Gaps = 3/304 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMV-RTDIRPDGAT 60
YA ++ + R+FD +N+ SW +I GYAQ+G +E L F+RMV + P+ AT
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLD-LDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ VLSACA LG+ G+ + +Y G + +D V+ +L+ MY KCG+I+ A EVF +
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI 250
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+DL W +MIN A HG G EA+NLFH+M I PD + + +L AC H GLVEDG
Sbjct: 251 KRRDLISWNTMINGLAAHGHGTEALNLFHEMK-NSGISPDKVTFVGVLCACKHMGLVEDG 309
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
L +F SM DF I P ++H C+ DLL R G L AV+ I MP+ A W+ LL A +
Sbjct: 310 LAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASK 369
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
++ V++GE+A +L L P + ++V+++N+Y G++ +A ++ + KE G
Sbjct: 370 VYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGV 429
Query: 300 SQVE 303
S +E
Sbjct: 430 SWIE 433
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 44/256 (17%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
+L SARR FDL+ ++I+ W +MI+GY + G+ EA LF +M
Sbjct: 74 DLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM----------------- 116
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
C D+ S + ++L Y+ G ++ VFD + ++++
Sbjct: 117 PCRDVMSWN----------------------TVLEGYANIGDMEACERVFDDMPERNVFS 154
Query: 127 WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM 186
W +I YA +G +E + F +M E ++P+ T +L AC+ G + G K+
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFG-KWVHKY 213
Query: 187 HEDFGIAPT-VKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS--ACRIHGN 243
E G V L D+ G+ G +++A++ +G+ +W+ +++ A HG
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR-DLISWNTMINGLAAHGHGT 272
Query: 244 VELGELAAAKLSDLSP 259
L K S +SP
Sbjct: 273 EALNLFHEMKNSGISP 288
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC + A +F ++++SW +MI G A GH EAL+LF M + I PD T
Sbjct: 233 MYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVT 292
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLH------MYSKCGSIQKARE 114
VL AC +G + G Y + D + + H + S+ G + +A E
Sbjct: 293 FVGVLCACKHMGLVEDG-----LAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVE 347
Query: 115 VFDRVTDK-DLTIWTSMINCYAIH 137
+++ K D IW +++ ++
Sbjct: 348 FINKMPVKADAVIWATLLGASKVY 371
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 186/302 (61%), Gaps = 2/302 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YAK ++ SAR +F+ G ++ +W+++I GYAQ+G P EA +F M +++PD +
Sbjct: 248 YAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIM 307
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ-VQTSLLHMYSKCGSIQKAREVFDRVT 120
++SAC+ +G ++++ Y++ V +L+ M +KCG + +A ++F+ +
Sbjct: 308 VGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMP 367
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+DL + SM+ AIHG G+EAI LF KM V+E I+PD + +T IL C S LVE+GL
Sbjct: 368 QRDLVSYCSMMEGMAIHGCGSEAIRLFEKM-VDEGIVPDEVAFTVILKVCGQSRLVEEGL 426
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++F+ M + + I + HY+C+ +LL R G+L A + I+ MP + A AW LL C +
Sbjct: 427 RYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSL 486
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HGN E+ E+ A L +L P S+GSYVL++N+Y +L +W + +R+ ++ + K CGRS
Sbjct: 487 HGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRS 546
Query: 301 QV 302
+
Sbjct: 547 WI 548
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 10/242 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y KC +L SAR++F +N +SWT+++ Y +SG EA +F M ++ +
Sbjct: 154 FYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNL----GS 209
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++ G L +++ + + D TS++ Y+K G + AR++F+
Sbjct: 210 WNALVDGLVKSGDLVNAKKLFDEM----PKRDIISYTSMIDGYAKGGDMVSARDLFEEAR 265
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D+ W+++I YA +G NEA +F +M + + PD + ++ ACS G E
Sbjct: 266 GVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN-VKPDEFIMVGLMSACSQMGCFELCE 324
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K +H+ + L D+ + G +D A + MP ++ ++ I
Sbjct: 325 KVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMP-QRDLVSYCSMMEGMAI 383
Query: 241 HG 242
HG
Sbjct: 384 HG 385
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 16/225 (7%)
Query: 14 IFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI-RPDGATLATVLSACADLG 72
+F+ W +I GY+ E + + RM+RT + RPD T V+ C++ G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 73 SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMIN 132
+ G + + G D D V TS + Y KC + AR+VF + +++ WT+++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 133 CYAIHGMGNEAINLFHKMTVEERIMPDAIV--YTSILLACSHSGLVEDGLKFFKSMHEDF 190
Y G EA ++F +MP+ + + +++ SG + + K F M +
Sbjct: 185 AYVKSGELEEAKSMFD-------LMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR- 236
Query: 191 GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
+ YT + D + G + A D + V +AWS L+
Sbjct: 237 ----DIISYTSMIDGYAKGGDMVSARDLFEE-ARGVDVRAWSALI 276
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
M AKC ++ A ++F+ ++++S+ SM+ G A G +EA+ LF +MV I PD
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVA 408
Query: 61 LATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+L C + +G E + Y + + ++++ S+ G +++A E+ +
Sbjct: 409 FTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSM 468
Query: 120 T-DKDLTIWTSMINCYAIHG 138
+ + W S++ ++HG
Sbjct: 469 PFEAHASAWGSLLGGCSLHG 488
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 178/306 (58%), Gaps = 1/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMV-RTDIRPDGA 59
MY KC + A +F K+++SW ++I+G+ +G +++ F M+ + RPD
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 367
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ VL +C++LG L + + Y+ YG D + + SL+ +YS+CGS+ A +VF+ +
Sbjct: 368 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
KD +WTS+I Y IHG G +A+ F+ M + P+ + + SIL ACSH+GL+ +G
Sbjct: 428 ALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
L+ FK M D+ +AP ++HY L DLLGRVG LD A++ + MP Q LL ACR
Sbjct: 488 LRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACR 547
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
IH N E+ E A KL +L +G Y+LM+N+Y G+W+ +RN + + + K
Sbjct: 548 IHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAE 607
Query: 300 SQVEVK 305
S +E++
Sbjct: 608 SLIEIR 613
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 125/241 (51%), Gaps = 2/241 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YAK A +F + A K+++SW+++IA Y Q+G AEAL +F M+ P+ AT+
Sbjct: 208 YAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATV 267
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
VL ACA L +G++ E GL+ + +V T+L+ MY KC S ++A VF R+
Sbjct: 268 LCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR 327
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
KD+ W ++I+ + ++GM + +I F M +E PDAI+ +L +CS G +E K
Sbjct: 328 KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA-K 386
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
F S +G L +L R G L A G+ L W+ L++ IH
Sbjct: 387 CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIH 445
Query: 242 G 242
G
Sbjct: 446 G 446
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 130/246 (52%), Gaps = 10/246 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGA 59
MY KC + A R+FD +I++W+SM++G+ ++G P +A++ FRRMV +D+ PD
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
TL T++SAC L + G+ + ++ G D + SLL+ Y+K + ++A +F +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+KD+ W+++I CY +G EA+ +F+ M +++ P+ +L AC+ + +E G
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQG 283
Query: 180 LKFFKSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
K HE G+ VK T L D+ + + A +P +W L+S
Sbjct: 284 RK----THELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALIS 338
Query: 237 ACRIHG 242
++G
Sbjct: 339 GFTLNG 344
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACAD 70
AR++F +++ W +++ ++ E L F M R + +PD TL L AC +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 71 LGSLSKGQEIEEYIYL-YGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTS 129
L ++ G+ I ++ L D V +SL++MY KCG + +A +FD + D+ W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
M++ + +G +A+ F +M + + PD + +++ AC+
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 189/305 (61%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK + + R+F ++ +SW S++AGY Q+G EAL LFR+MV ++P
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++V+ ACA L +L G+++ Y+ G + + ++L+ MYSKCG+I+ AR++FDR+
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D WT++I +A+HG G+EA++LF +M + + P+ + + ++L ACSH GLV++
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMK-RQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F SM + +G+ ++HY +ADLLGR G+L+ A + I M ++ WS LLS+C +
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H N+EL E A K+ + + G+YVLM N+Y S G+WKE +R + K L K+ S
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584
Query: 301 QVEVK 305
+E+K
Sbjct: 585 WIEMK 589
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 131/239 (54%), Gaps = 9/239 (3%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
+ S RR+F++ K+++S+ ++IAGYAQSG +AL + R M TD++PD TL++VL
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
++ + KG+EI Y+ G+D D + +SL+ MY+K I+ + VF R+ +D W
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
S++ Y +G NEA+ LF +M V ++ P A+ ++S++ AC+H + G K +H
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATLHLG----KQLH 366
Query: 188 EDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGN 243
G + + L D+ + G + A M + + +W+ ++ +HG+
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGH 424
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 24/184 (13%)
Query: 15 FDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSL 74
F +L+W S+I + ++AL F M + PD +VL +C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 75 SKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKC---GSIQKAREVFDRVT-------DKDL 124
G+ + +I G+D D +L++MY+K GS VFD + D+D+
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 125 TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMP--DAIVYTSILLACSHSGLVEDGLKF 182
T I G +++ + +MP D + Y +I+ + SG+ ED L+
Sbjct: 182 KAET------CIMPFGIDSVRRVFE------VMPRKDVVSYNTIIAGYAQSGMYEDALRM 229
Query: 183 FKSM 186
+ M
Sbjct: 230 VREM 233
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 179/305 (58%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y + AR++FD + +N+++W S+I+ ++ E +LFR+M I AT
Sbjct: 280 LYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWAT 339
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L T+L AC+ + +L G+EI I D + SL+ MY KCG ++ +R VFD +
Sbjct: 340 LTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 399
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KDL W M+NCYAI+G E INLF M +E + PD I + ++L CS +GL E GL
Sbjct: 400 TKDLASWNIMLNCYAINGNIEEVINLFEWM-IESGVAPDGITFVALLSGCSDTGLTEYGL 458
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
F+ M +F ++P ++HY CL D+LGR G++ AV I+ MP A W LL++CR+
Sbjct: 459 SLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRL 518
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HGNV +GE+AA +L L P + G+YV+++N+Y W +R ++ + + KE G S
Sbjct: 519 HGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCS 578
Query: 301 QVEVK 305
V+VK
Sbjct: 579 WVQVK 583
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 12/251 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILS---WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
+++ C L AR+IFD ++L+ W +M GY+++G P +AL ++ M+ + I P
Sbjct: 176 LFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPG 235
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
+++ L AC DL L G+ I I +DQ V LL +Y + G AR+VFD
Sbjct: 236 NFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFD 295
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
++++++ W S+I+ + +E NLF KM EE I T+IL ACS +
Sbjct: 296 GMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ-EEMIGFSWATLTTILPACSRVAALL 354
Query: 178 DGLKFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCL 234
G K +H P V L D+ G+ G+++ + M L +W+ +
Sbjct: 355 TG----KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM-LTKDLASWNIM 409
Query: 235 LSACRIHGNVE 245
L+ I+GN+E
Sbjct: 410 LNCYAINGNIE 420
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 180/305 (59%), Gaps = 7/305 (2%)
Query: 4 KCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLAT 63
KC + SAR +FD K++++W +MI+GY G+P EAL +F+ M PD T+ +
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 64 VLSACADLGSLSKGQEIEEYIYLYG-----LDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
+LSACA LG L G+ + YI + + + +L+ MY+KCGSI +A EVF
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
V D+DL+ W ++I A+H +I +F +M ++ P+ + + ++LACSHSG V++
Sbjct: 341 VKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQ-RLKVWPNEVTFIGVILACSHSGRVDE 398
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
G K+F M + + I P +KHY C+ D+LGR GQL+ A ++ M ++ A W LL AC
Sbjct: 399 GRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGAC 458
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
+I+GNVELG+ A KL + SG YVL++N+Y S G+W +R + D + K G
Sbjct: 459 KIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTG 518
Query: 299 RSQVE 303
S +E
Sbjct: 519 VSLIE 523
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 119/310 (38%), Gaps = 71/310 (22%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
L A ++FD ++ ++ G AQS P + + L+ M + + PD T VL A
Sbjct: 62 LKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKA 121
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
C+ L S G + +G L++ V+ +L+ ++ CG + A E+FD W
Sbjct: 122 CSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 181
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIM--------------------------PDAI 161
+SM + YA G +EA+ LF +M ++++ D +
Sbjct: 182 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 241
Query: 162 VYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTV------------------------- 196
+ +++ + G ++ L FK M D G P V
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMR-DAGEHPDVVTILSLLSACAVLGDLETGKRLHIY 300
Query: 197 ---------------KHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
+ L D+ + G +D A++ +G+ D W+ L+ +H
Sbjct: 301 ILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK-DRDLSTWNTLIVGLALH 359
Query: 242 ---GNVELGE 248
G++E+ E
Sbjct: 360 HAEGSIEMFE 369
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 44/232 (18%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC ++ A +F +++ +W ++I G A H ++++F M R + P+ T
Sbjct: 324 MYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVT 382
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
V+ AC+ G + +G+ +Y L + MY+
Sbjct: 383 FIGVILACSHSGRVDEGR---KYFSL------------MRDMYN---------------I 412
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ ++ + M++ G EA M +E P+AIV+ ++L AC G VE G
Sbjct: 413 EPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIE----PNAIVWRTLLGACKIYGNVELGK 468
Query: 181 ---KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ 229
+ SM +D Y L+++ GQ D V ++ M D + +
Sbjct: 469 YANEKLLSMRKD-----ESGDYVLLSNIYASTGQWD-GVQKVRKMFDDTRVK 514
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 238 bits (606), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 182/306 (59%), Gaps = 2/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y C L + + +FD K+++SW ++I GY Q+G P AL +FR+MV I+ G +
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGIS 599
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ V AC+ L SL G+E Y + L+ D + SL+ MY+K GSI ++ +VF+ +
Sbjct: 600 MMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 659
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K W +MI Y IHG+ EAI LF +M PD + + +L AC+HSGL+ +GL
Sbjct: 660 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSGLIHEGL 718
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAI-QGMPLDVQAQAWSCLLSACR 239
++ M FG+ P +KHY C+ D+LGR GQLD A+ + + M + W LLS+CR
Sbjct: 719 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 778
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
IH N+E+GE AAKL +L P +YVL++NLY LGKW++ +R ++ L K+ G
Sbjct: 779 IHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGC 838
Query: 300 SQVEVK 305
S +E+
Sbjct: 839 SWIELN 844
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 120/249 (48%), Gaps = 19/249 (7%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YAKC +L+ A+R+F K + SW ++I G+AQS P +LD +M + + PD T+
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
++LSAC+ L SL G+E+ +I L+ D V S+L +Y CG + + +FD + D
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
K L W ++I Y +G + A+ +F +M + I I + ACS + L+
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG-IQLCGISMMPVFGACS----LLPSLR 614
Query: 182 FFKSMHEDFGIAPTVKHY--------TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSC 233
+ H A +KH L D+ + G + + G+ + +W+
Sbjct: 615 LGREAH-----AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNA 668
Query: 234 LLSACRIHG 242
++ IHG
Sbjct: 669 MIMGYGIHG 677
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGA 59
MYA C + +R +FD KN+ W ++I+ Y+++ E L+ F M+ T D+ PD
Sbjct: 129 MYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHF 188
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T V+ ACA + + G + + GL D V +L+ Y G + A ++FD +
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE---RIMPDAIVYTSILLACS 171
+++L W SMI ++ +G E+ L +M E MPD ++L C+
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR--TDIRPDG 58
MY+KC +T+A+ IF + KN++SW +M+ G++ G D+ R+M+ D++ D
Sbjct: 336 MYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 395
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T+ + C L +E+ Y ++ V + + Y+KCGS+ A+ VF
Sbjct: 396 VTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHG 455
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
+ K + W ++I +A +++ +M + ++PD+ S+L ACS
Sbjct: 456 IRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG-LLPDSFTVCSLLSACS 507
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD----IRPDGATLAT 63
+T A ++FD+ +N++SW SMI ++ +G E+ L M+ + PD ATL T
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKD 123
VL CA + G+ + + LD + + +L+ MYSKCG I A+ +F +K+
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 124 LTIWTSMINCYAIHGMGNEAINLFHKMTV-EERIMPDAIVYTSILLACSHSGLVEDGLKF 182
+ W +M+ ++ G + ++ +M E + D + + + C H E L
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH----ESFLPS 413
Query: 183 FKSMH 187
K +H
Sbjct: 414 LKELH 418
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 92 DQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMT 151
D + T ++ MY+ CGS +R VFD + K+L W ++I+ Y+ + + +E + F +M
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 152 VEERIMPDAIVYTSILLACS 171
++PD Y ++ AC+
Sbjct: 179 STTDLLPDHFTYPCVIKACA 198
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 238 bits (606), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 197/305 (64%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC + A ++F+ K+ ++W+SM+AGY Q+ + EAL L+RR R + + T
Sbjct: 206 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L++V+ AC++L +L +G+++ I G + V +S + MY+KCGS++++ +F V
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 325
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K+L +W ++I+ +A H E + LF KM ++ + P+ + ++S+L C H+GLVE+G
Sbjct: 326 EKNLELWNTIISGFAKHARPKEVMILFEKMQ-QDGMHPNEVTFSSLLSVCGHTGLVEEGR 384
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+FFK M +G++P V HY+C+ D+LGR G L A + I+ +P D A W LL++CR+
Sbjct: 385 RFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRV 444
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
+ N+EL E+AA KL +L P ++G++VL++N+Y + +W+E R L+ ++ K G+S
Sbjct: 445 YKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKS 504
Query: 301 QVEVK 305
+++K
Sbjct: 505 WIDIK 509
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 14/217 (6%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+KC + AR++FD ++++SW +MI Y ++ +EALD+F M + T+
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
++VLSAC + +++ +DL+ V T+LL +Y+KCG I+ A +VF+ + D
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD 225
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLF---HKMTVEERIMPDAIVYTSILLACSHSGLVED 178
K W+SM+ Y + EA+ L+ +M++E+ + +S++ ACS+ + +
Sbjct: 226 KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ----NQFTLSSVICACSNLAALIE 281
Query: 179 GLKFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQL 212
G K MH G V + D+ + G L
Sbjct: 282 G----KQMHAVICKSGFGSNVFVASSAVDMYAKCGSL 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKD 123
+L CA G++ + + I L+ D + L++ YSKCG ++ AR+VFD + ++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 124 LTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFF 183
L W +MI Y + M +EA+++F +M E + + +S+L AC G+ D L+
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI-SSVLSAC---GVNCDALECK 182
Query: 184 KSMHEDFGIAPTVKHY--TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
K + Y T L DL + G + AV + M D + WS +++ +
Sbjct: 183 KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQN 241
Query: 242 GNVE 245
N E
Sbjct: 242 KNYE 245
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 238 bits (606), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 182/310 (58%), Gaps = 7/310 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YA + +AR +F A +N++SW ++IAGY Q+G EAL LF + R + P +
Sbjct: 330 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSF 389
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDL------DQQVQTSLLHMYSKCGSIQKAREV 115
A +L ACADL L G + ++ +G D V SL+ MY KCG +++ V
Sbjct: 390 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 449
Query: 116 FDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGL 175
F ++ ++D W +MI +A +G GNEA+ LF +M +E PD I +L AC H+G
Sbjct: 450 FRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM-LESGEKPDHITMIGVLSACGHAGF 508
Query: 176 VEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
VE+G +F SM DFG+AP HYTC+ DLLGR G L+ A I+ MP+ + W LL
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Query: 236 SACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVK 295
+AC++H N+ LG+ A KL ++ P +SG YVL++N+Y LGKW++ +R + + + K
Sbjct: 569 AACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK 628
Query: 296 ECGRSQVEVK 305
+ G S ++++
Sbjct: 629 QPGCSWIKIQ 638
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 119/207 (57%), Gaps = 10/207 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC N+ A+R+FD +N++SW S+I + Q+G EALD+F+ M+ + + PD T
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYG-LDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
LA+V+SACA L ++ GQE+ + L D + + + MY+KC I++AR +FD +
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+++ TSMI+ YA+ A +F KM ER + + + +++ + +G E+
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMA--ER---NVVSWNALIAGYTQNGENEEA 370
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLL 206
L F + + + PT HY+ A++L
Sbjct: 371 LSLFCLLKRE-SVCPT--HYS-FANIL 393
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 120/254 (47%), Gaps = 32/254 (12%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-------- 53
Y+KC +L R++FD +NI +W S++ G + G EA LFR M D
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 54 ------------------IRPDGATL-----ATVLSACADLGSLSKGQEIEEYIYLYGLD 90
+ +G L A+VLSAC+ L ++KG ++ I
Sbjct: 125 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL 184
Query: 91 LDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKM 150
D + ++L+ MYSKCG++ A+ VFD + D+++ W S+I C+ +G EA+++F +M
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF-QM 243
Query: 151 TVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVG 210
+E R+ PD + S++ AC+ ++ G + + ++ + + D+ +
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303
Query: 211 QLDLAVDAIQGMPL 224
++ A MP+
Sbjct: 304 RIKEARFIFDSMPI 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC + +F ++ +SW +MI G+AQ+G+ EAL+LFR M+ + +PD T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 61 LATVLSACADLGSLSKGQE-IEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ VLSAC G + +G+ +G+ + T ++ + + G +++A+ + + +
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 120 T-DKDLTIWTSMINCYAIH 137
D IW S++ +H
Sbjct: 556 PMQPDSVIWGSLLAACKVH 574
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 95 VQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE 154
+Q L+ YSKCGS++ R+VFD++ +++ W S++ G +EA +LF M E
Sbjct: 57 IQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP--E 114
Query: 155 RIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
R D + S++ + E+ L +F MH++
Sbjct: 115 R---DQCTWNSMVSGFAQHDRCEEALCYFAMMHKE 146
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 237 bits (605), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 179/304 (58%), Gaps = 1/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
M+ K D + A+R F+ + KN++S+ + + G ++ + +A L + ++ T
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A++LS A++GS+ KG++I + GL +Q V +L+ MYSKCGSI A VF+ +
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++++ WTSMI +A HG + F++M +EE + P+ + Y +IL ACSH GLV +G
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQM-IEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F SM+ED I P ++HY C+ DLL R G L A + I MP W L ACR+
Sbjct: 596 RHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRV 655
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H N ELG+LAA K+ +L P +Y+ ++N+Y GKW+E+ MR + + LVKE G S
Sbjct: 656 HSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCS 715
Query: 301 QVEV 304
+EV
Sbjct: 716 WIEV 719
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 7/177 (3%)
Query: 1 MYAKCDN-LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
M+ K +N +A ++FD + N+++WT MI Q G P EA+ F MV + D
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKC---GSIQKAREVF 116
TL++V SACA+L +LS G+++ + GL D V+ SL+ MY+KC GS+ R+VF
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVF 328
Query: 117 DRVTDKDLTIWTSMINCYAIH-GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
DR+ D + WT++I Y + + EAINLF +M + + P+ ++S AC +
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 42 ALDLFRRMVRTDIRP-DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLL 100
ALDL M R IRP D T +++L +C G+ + + + ++ D + SL+
Sbjct: 48 ALDL---MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 101 HMYSKCGSIQKAREVFD---RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIM 157
+YSK G KA +VF+ R +D+ W++M+ CY +G +AI +F + +E ++
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF-LELGLV 163
Query: 158 PDAIVYTSILLACSHSGLVEDG 179
P+ YT+++ ACS+S V G
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVG 185
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 237 bits (604), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 188/297 (63%), Gaps = 2/297 (0%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA-TLATVLSACA 69
AR+IFD K+ +S+ S+++ YAQSG EA ++FRR+V+ + A TL+TVL A +
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298
Query: 70 DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTS 129
G+L G+ I + + GL+ D V TS++ MY KCG ++ AR+ FDR+ +K++ WT+
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
MI Y +HG +A+ LF M ++ + P+ I + S+L ACSH+GL +G ++F +M
Sbjct: 359 MIAGYGMHGHAAKALELFPAM-IDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
Query: 190 FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGEL 249
FG+ P ++HY C+ DLLGR G L A D IQ M + + WS LL+ACRIH NVEL E+
Sbjct: 418 FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEI 477
Query: 250 AAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEVKA 306
+ A+L +L + G Y+L++++Y G+WK+ +R ++ + LVK G S +E+
Sbjct: 478 SVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNG 534
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 143/271 (52%), Gaps = 23/271 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+ C L AR++FD +NI+SWTSMI GY +G+ +A+ LF+ ++ + D A
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 61 ------LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGS--IQKA 112
L +V+SAC+ + + + I ++ G D V +LL Y+K G + A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 113 REVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
R++FD++ DKD + S+++ YA GM NEA +F ++ + + +AI +++LLA SH
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 173 SGLVEDGLKFFKSMHED---FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ 229
SG L+ K +H+ G+ V T + D+ + G+++ A A M + +
Sbjct: 300 SG----ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVR 354
Query: 230 AWSCLLSACRIHGNVELGELAAAKLSDLSPG 260
+W+ +++ +HG+ AAK +L P
Sbjct: 355 SWTAMIAGYGMHGH-------AAKALELFPA 378
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 105/196 (53%), Gaps = 12/196 (6%)
Query: 7 NLTSARRIFDLTAGK-NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVL 65
NLT+ +F+ K ++ SW S+IA A+SG AEAL F M + + P ++ +
Sbjct: 27 NLTT---LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83
Query: 66 SACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT 125
AC+ L + G++ + +++G D V ++L+ MYS CG ++ AR+VFD + +++
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 126 IWTSMINCYAIHGMGNEAINLFHKMTVEER-----IMPDAIVYTSILLACSH---SGLVE 177
WTSMI Y ++G +A++LF + V+E + D++ S++ ACS GL E
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 178 DGLKFFKSMHEDFGIA 193
F D G++
Sbjct: 204 SIHSFVIKRGFDRGVS 219
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 12/144 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC + +AR+ FD KN+ SWT+MIAGY GH A+AL+LF M+ + +RP+ T
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLH------MYSKCGSIQKARE 114
+VL+AC+ G +E + + + V+ L H + + G +QKA +
Sbjct: 391 FVSVLAACS-----HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYD 445
Query: 115 VFDRVTDK-DLTIWTSMINCYAIH 137
+ R+ K D IW+S++ IH
Sbjct: 446 LIQRMKMKPDSIIWSSLLAACRIH 469
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 180/284 (63%), Gaps = 1/284 (0%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N++SWTS+IAG AQ+G EAL+LFR M ++P+ T+ ++L AC ++ +L G+
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTH 411
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGN 141
+ L + V ++L+ MY+KCG I ++ VF+ + K+L W S++N +++HG
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAK 471
Query: 142 EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTC 201
E +++F + + R+ PD I +TS+L AC GL ++G K+FK M E++GI P ++HY+C
Sbjct: 472 EVMSIFESL-MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSC 530
Query: 202 LADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGS 261
+ +LLGR G+L A D I+ MP + + W LL++CR+ NV+L E+AA KL L P +
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN 590
Query: 262 SGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEVK 305
G+YVL++N+Y + G W E +RN ++ L K G S ++VK
Sbjct: 591 PGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 2/193 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+ + A + I S++S+I ++ +++ +F RM + PD L
Sbjct: 60 YSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVL 119
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+ CA+L + G++I + GLD+D VQ S+ HMY +CG + AR+VFDR++D
Sbjct: 120 PNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSD 179
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
KD+ ++++ YA G E + + +M I + + + IL + SG ++ +
Sbjct: 180 KDVVTCSALLCAYARKGCLEEVVRILSEME-SSGIEANIVSWNGILSGFNRSGYHKEAVV 238
Query: 182 FFKSMHEDFGIAP 194
F+ +H G P
Sbjct: 239 MFQKIHH-LGFCP 250
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 110/230 (47%), Gaps = 37/230 (16%)
Query: 1 MYAKCDNLTSARRIFDLTAGK-----------------------------------NILS 25
MY +C + AR++FD + K NI+S
Sbjct: 160 MYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVS 219
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
W +++G+ +SG+ EA+ +F+++ PD T+++VL + D L+ G+ I Y+
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAIN 145
GL D+ V ++++ MY K G + +F++ + + + I + +G+ ++A+
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 146 LFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPT 195
+F ++ E+ + + + +TSI+ C+ +G + L+ F+ M + G+ P
Sbjct: 340 MF-ELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPN 387
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + ++ +F++ KN++ W S++ G++ G E + +F ++RT ++PD +
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 61 LATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
++LSAC +G +G + + + YG+ + + ++++ + G +Q+A ++ +
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Query: 120 T-DKDLTIWTSMIN 132
+ D +W +++N
Sbjct: 552 PFEPDSCVWGALLN 565
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 181/300 (60%), Gaps = 1/300 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y C + A+R+F+ K+++SW SM G++Q+G E L+ F +M + D+ D +
Sbjct: 393 VYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVS 452
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L++V+SACA + SL G+++ + GLD DQ V +SL+ +Y KCG ++ R VFD +
Sbjct: 453 LSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMV 512
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D W SMI+ YA +G G EAI+LF KM+V I P I + +L AC++ GLVE+G
Sbjct: 513 KSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG-IRPTQITFMVVLTACNYCGLVEEGR 571
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K F+SM D G P +H++C+ DLL R G ++ A++ ++ MP DV WS +L C
Sbjct: 572 KLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVA 631
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
+G +G+ AA K+ +L P +S +YV ++ ++ + G W+ + ++R L+ + K G S
Sbjct: 632 NGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 121/253 (47%), Gaps = 41/253 (16%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YA C + +R +FD + + ++ W SMI+GY + EAL LF M R + R D TL
Sbjct: 263 YANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTL 321
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
A V++AC LG L G+++ + +GL D V ++LL MYSKCGS +A ++F V
Sbjct: 322 AAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVES 381
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIV-YTSILLACSHSGLVEDGL 180
D + SMI Y G ++A +F ERI +++ + S+ S +G + L
Sbjct: 382 YDTILLNSMIKVYFSCGRIDDAKRVF------ERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++F MH +LDL D + + S ++SAC
Sbjct: 436 EYFHQMH-----------------------KLDLPTDEV----------SLSSVISACAS 462
Query: 241 HGNVELGELAAAK 253
++ELGE A+
Sbjct: 463 ISSLELGEQVFAR 475
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 123/243 (50%), Gaps = 43/243 (17%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
+AK L+ ARR+F+ K++++ S++ GY +G+ EAL LF+ + + D TL
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITL 190
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGS------------- 108
TVL ACA+L +L G++I I + G++ D ++ +SL+++Y+KCG
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
Query: 109 ------------------IQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKM 150
+ ++R +FDR +++ + +W SMI+ Y + M EA+ LF++M
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM 310
Query: 151 TVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH---EDFGIAPTVKHYTCLADLLG 207
E R D+ +++ AC G +E G K MH FG+ + + L D+
Sbjct: 311 RNETR--EDSRTLAAVINACIGLGFLETG----KQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 208 RVG 210
+ G
Sbjct: 365 KCG 367
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 176/306 (57%), Gaps = 2/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK + A R+F K +SW S+I+G+AQ+G +A + M +PD T
Sbjct: 261 MYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVT 320
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L VL AC+ +GSL G+ + YI L LD+ T+L+ MYSKCG++ +RE+F+ V
Sbjct: 321 LVGVLVACSQVGSLKTGRLVHCYI-LKRHVLDRVTATALMDMYSKCGALSSSREIFEHVG 379
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KDL W +MI+CY IHG G E ++LF KMT E I PD + S+L A SHSGLVE G
Sbjct: 380 RKDLVCWNTMISCYGIHGNGQEVVSLFLKMT-ESNIEPDHATFASLLSALSHSGLVEQGQ 438
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F M + I P+ KHY CL DLL R G+++ A+D I LD W LLS C
Sbjct: 439 HWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCIN 498
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H N+ +G++AA K+ L+P S G L++N + + KWKE +R L+ + K G S
Sbjct: 499 HRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYS 558
Query: 301 QVEVKA 306
+EV
Sbjct: 559 AIEVNG 564
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 4/243 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y KC + A +F A ++++ WT+M+ G+AQ+G +A++ +R M D
Sbjct: 160 LYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVV 219
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +L A DLG G+ + Y+Y GL ++ V+TSL+ MY+K G I+ A VF R+
Sbjct: 220 MLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM 279
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K W S+I+ +A +G+ N+A +M PD + +L+ACS G ++ G
Sbjct: 280 FKTAVSWGSLISGFAQNGLANKAFEAVVEMQ-SLGFQPDLVTLVGVLVACSQVGSLKTGR 338
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ + + T L D+ + G L + + + + W+ ++S I
Sbjct: 339 LVHCYILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHVGRK-DLVCWNTMISCYGI 395
Query: 241 HGN 243
HGN
Sbjct: 396 HGN 398
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 111/230 (48%), Gaps = 3/230 (1%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
++ AR++FD + + + SMI Y++ +P E L L+ +M+ I+PD +T + A
Sbjct: 66 ISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKA 125
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
C L KG+ + +G D V +S+L++Y KCG + +A +F ++ +D+ W
Sbjct: 126 CLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICW 185
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
T+M+ +A G +A+ + +M E D +V +L A G + G ++
Sbjct: 186 TTMVTGFAQAGKSLKAVEFYREMQ-NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLY 244
Query: 188 EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
G+ V T L D+ +VG +++A M A +W L+S
Sbjct: 245 RT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKT-AVSWGSLISG 292
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 105 KCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYT 164
+ G I AR+VFD + + ++++ SMI Y+ +E + L+ +M + E+I PD+ +T
Sbjct: 62 RIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQM-IAEKIQPDSSTFT 120
Query: 165 SILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
+ AC SGLV + + DFG V + + +L + G++D A
Sbjct: 121 MTIKACL-SGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEA 170
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 234 bits (598), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 184/305 (60%), Gaps = 2/305 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y K + A ++F K+I++W++M+AGYAQ+G A+ +F + + I+P+ T
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 62 ATVLSACADL-GSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+++L+ CA S+ +G++ + LD V ++LL MY+K G+I+ A EVF R
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR 557
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+KDL W SMI+ YA HG +A+++F +M + ++ D + + + AC+H+GLVE+G
Sbjct: 558 EKDLVSWNSMISGYAQHGQAMKALDVFKEMK-KRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K+F M D IAPT +H +C+ DL R GQL+ A+ I+ MP + W +L+ACR+
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRV 676
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H ELG LAA K+ + P S +YVL++N+Y G W+E +R L++ + + KE G S
Sbjct: 677 HKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 736
Query: 301 QVEVK 305
+EVK
Sbjct: 737 WIEVK 741
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 148/330 (44%), Gaps = 44/330 (13%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y K N R++FD +N+++WT++I+GYA++ E L LF RM +P+ T
Sbjct: 138 YMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTF 197
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
A L A+ G +G ++ + GLD V SL+++Y KCG+++KAR +FD+
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKM------------------------------- 150
K + W SMI+ YA +G+ EA+ +F+ M
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 151 ---TVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLG 207
V+ + D + T++++A S + D L+ FK + G V +T +
Sbjct: 318 HCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK----EIGCVGNVVSWTAMISGFL 373
Query: 208 RVGQLDLAVDAIQGMP---LDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGS 264
+ + AVD M + +S +L+A + + E+ A + SS
Sbjct: 374 QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV---ISPSEVHAQVVKTNYERSSTV 430
Query: 265 YVLMANLYTSLGKWKEAHIMRNLIDGKELV 294
+ + Y LGK +EA + + ID K++V
Sbjct: 431 GTALLDAYVKLGKVEEAAKVFSGIDDKDIV 460
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 141/288 (48%), Gaps = 13/288 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y KC N+ AR +FD T K++++W SMI+GYA +G EAL +F M +R ++
Sbjct: 238 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS 297
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV- 119
A+V+ CA+L L +++ + YG DQ ++T+L+ YSKC ++ A +F +
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++ WT+MI+ + + EA++LF +M + + P+ Y+ IL A E
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK-RKGVRPNEFTYSVILTALPVISPSEVH 416
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ K+ +E + TV T L D ++G+++ A G+ D AWS +L+
Sbjct: 417 AQVVKTNYER---SSTVG--TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYA 470
Query: 240 IHGNVE-----LGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAH 282
G E GEL + S + A S+G+ K+ H
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 518
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK N+ SA +F K+++SW SMI+GYAQ G +ALD+F+ M + ++ DG T
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVT 598
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLD----QQVQTSLLHMYSKCGSIQKAREVF 116
V +AC G + +G E+Y + D ++ + ++ +YS+ G ++KA +V
Sbjct: 599 FIGVFAACTHAGLVEEG---EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 117 DRVTDK-DLTIWTSMINCYAIH 137
+ + + TIW +++ +H
Sbjct: 656 ENMPNPAGSTIWRTILAACRVH 677
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
L +A +FD + G++ S+ S++ G+++ G EA LF + R + D + ++VL
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
A L G+++ +G D V TSL+ Y K + + R+VFD + ++++ W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
T++I+ YA + M +E + LF +M E P++ + + L + G+ GL+ +
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 188 EDFGIAPTVKHYTCLADLLGRVGQLDLA 215
++ G+ T+ L +L + G + A
Sbjct: 222 KN-GLDKTIPVSNSLINLYLKCGNVRKA 248
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 234 bits (598), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 188/304 (61%), Gaps = 1/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y KC N+ A R+F+ GK+++SWTSMI+ A +G+ +EA++LFRRMV T + D
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +LSA A L +L+KG+EI Y+ G L+ + +++ MY+ CG +Q A+ VFDR+
Sbjct: 590 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 649
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K L +TSMIN Y +HG G A+ LF KM E + PD I + ++L ACSH+GL+++G
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMR-HENVSPDHISFLALLYACSHAGLLDEGR 708
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
F K M ++ + P +HY CL D+LGR + A + ++ M + A+ W LL+ACR
Sbjct: 709 GFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRS 768
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H E+GE+AA +L +L P + G+ VL++N++ G+W + +R + + K G S
Sbjct: 769 HSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCS 828
Query: 301 QVEV 304
+E+
Sbjct: 829 WIEM 832
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 10/246 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY +C + A RI ++++W S+I GY Q+ EAL+ F M+ + D +
Sbjct: 329 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 388
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ ++++A L +L G E+ Y+ +G D + QV +L+ MYSKC F R+
Sbjct: 389 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH 448
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
DKDL WT++I YA + EA+ LF + ++R+ D ++ SIL A S V +
Sbjct: 449 DKDLISWTTVIAGYAQNDCHVEALELFRDVA-KKRMEIDEMILGSILRASS----VLKSM 503
Query: 181 KFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
K +H G+ TV L D+ G+ + A + + +W+ ++S+
Sbjct: 504 LIVKEIHCHILRKGLLDTVIQNE-LVDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISS 561
Query: 238 CRIHGN 243
++GN
Sbjct: 562 SALNGN 567
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC+ R F K+++SWT++IAGYAQ+ EAL+LFR + + + D
Sbjct: 430 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 489
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L ++L A + L S+ +EI +I GL LD +Q L+ +Y KC ++ A VF+ +
Sbjct: 490 LGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIK 548
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSI 166
KD+ WTSMI+ A++G +EA+ LF +M VE + D++ I
Sbjct: 549 GKDVVSWTSMISSSALNGNESEAVELFRRM-VETGLSADSVALLCI 593
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 11/186 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDG-A 59
MY KC +L A ++FD + +W +MI Y +G PA AL L+ M R + P G +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLS 183
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ +L ACA L + G E+ + G + +L+ MY+K + AR +FD
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243
Query: 120 TDK-DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+K D +W S+++ Y+ G E + LF +M + P++ S L AC D
Sbjct: 244 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPA-PNSYTIVSALTAC-------D 295
Query: 179 GLKFFK 184
G + K
Sbjct: 296 GFSYAK 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 15/260 (5%)
Query: 44 DLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY--LYGLDLDQQVQTSLLH 101
+ F+R+ ++ A VL C ++S+G+++ I+ +LD + L+
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVF 124
Query: 102 MYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAI 161
MY KCGS+ A +VFD + D+ W +MI Y +G A+ L+ M VE +P +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG--VPLGL 182
Query: 162 -VYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQ 220
+ ++L AC+ + G + S+ G T L + + L A
Sbjct: 183 SSFPALLKACAKLRDIRSGSE-LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 221 GMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANL-------YT 273
G A W+ +LS+ G L L + ++ + SY +++ L Y
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGK-SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 274 SLGKWKEAHIMRNLIDGKEL 293
LGK A ++++ EL
Sbjct: 301 KLGKEIHASVLKSSTHSSEL 320
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 234 bits (596), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/307 (41%), Positives = 180/307 (58%), Gaps = 6/307 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y+ C L +R +FD K+++ W SM AGY Q EAL+LF + + RPD T
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A +++A +L S+ GQE + GL+ + + +LL MY+KCGS + A + FD
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAA 617
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D+ W S+I+ YA HG G +A+ + KM + E I P+ I + +L ACSH+GLVEDGL
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKM-MSEGIEPNYITFVGVLSACSHAGLVEDGL 676
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K F+ M FGI P +HY C+ LLGR G+L+ A + I+ MP A W LLS C
Sbjct: 677 KQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAK 735
Query: 241 HGNVELGELAA--AKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
GNVEL E AA A LSD P SGS+ +++N+Y S G W EA +R + + +VKE G
Sbjct: 736 AGNVELAEHAAEMAILSD--PKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPG 793
Query: 299 RSQVEVK 305
RS + +
Sbjct: 794 RSWIGIN 800
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 4/185 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHP---AEALDLFRRMVRTDIRPD 57
MYAKCD LT AR++FD+ A +++ + +MI GY++ G EAL++FR M IRP
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T ++L A A L SL ++I ++ YGL+LD ++L+ +YS C ++ +R VFD
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+ KDL IW SM Y EA+NLF ++ + R PD + +++ A + V+
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQL-SRERPDEFTFANMVTAAGNLASVQ 572
Query: 178 DGLKF 182
G +F
Sbjct: 573 LGQEF 577
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y K N+ AR +FD K+ ++WT+MI+G + G +L LF +++ ++ PDG
Sbjct: 192 FYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYI 251
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L+TVLSAC+ L L G++I +I YGL++D + L+ Y KCG + A ++F+ +
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K++ WT++++ Y + + EA+ LF M+ + + PD +SIL +C+
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMS-KFGLKPDMYACSSILTSCA--------- 361
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADL 205
S+H G V YT A+L
Sbjct: 362 ----SLHA-LGFGTQVHAYTIKANL 381
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 4/171 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y KC + +A ++F+ KNI+SWT++++GY Q+ EA++LF M + ++PD
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYAC 353
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+++L++CA L +L G ++ Y L D V SL+ MY+KC + AR+VFD
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 122 KDLTIWTSMINCYAIHGMG---NEAINLFHKMTVEERIMPDAIVYTSILLA 169
D+ ++ +MI Y+ G +EA+N+F M I P + + S+L A
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF-RLIRPSLLTFVSLLRA 463
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 122/245 (49%), Gaps = 12/245 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGA 59
+Y++ + AR++F+ +N++SW++M++ G E+L +F RT P+
Sbjct: 88 LYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEY 147
Query: 60 TLATVLSACADLGSLSKGQ--EIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
L++ + AC+ L + +++ ++ G D D V T L+ Y K G+I AR VFD
Sbjct: 148 ILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFD 207
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+ +K WT+MI+ G ++ LF+++ +E+ ++PD + +++L ACS +E
Sbjct: 208 ALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL-MEDNVVPDGYILSTVLSACSILPFLE 266
Query: 178 DGLKFFKSMHED---FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCL 234
G K +H +G+ L D + G++ A GMP + +W+ L
Sbjct: 267 GG----KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTL 321
Query: 235 LSACR 239
LS +
Sbjct: 322 LSGYK 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 84 IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEA 143
I ++GL+LD + L+++YS+ G + AR+VF+++ +++L W++M++ HG+ E+
Sbjct: 70 IIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEES 129
Query: 144 INLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG--LKF-FKSMHEDFGIAPTVKHYT 200
+ +F + + P+ + +S + AC SGL G + F +S G V T
Sbjct: 130 LVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGT 187
Query: 201 CLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
L D + G +D A +P + W+ ++S C
Sbjct: 188 LLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 234 bits (596), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 182/305 (59%), Gaps = 2/305 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YAK ++ +A ++F KN +SWT++IAGY + G ALDLFR+M+ ++P+ T
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
++ L A A + SL G+EI Y+ + + V +SL+ MYSK GS++ + VF D
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 122 K-DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K D W +MI+ A HG+G++A+ + M ++ R+ P+ IL ACSHSGLVE+GL
Sbjct: 375 KHDCVFWNTMISALAQHGLGHKALRMLDDM-IKFRVQPNRTTLVVILNACSHSGLVEEGL 433
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++F+SM GI P +HY CL DLLGR G + I+ MP + W+ +L CRI
Sbjct: 434 RWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRI 493
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HGN ELG+ AA +L L P SS Y+L++++Y GKW+ +R ++ + + KE S
Sbjct: 494 HGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVS 553
Query: 301 QVEVK 305
+E++
Sbjct: 554 WIEIE 558
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y K L AR +FD ++++SW +M+ GYAQ G+ EAL ++ R+ I+ + +
Sbjct: 123 YVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
A +L+AC L ++ + + G + + S++ Y+KCG ++ A+ FD +T
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 122 KDLTIWTSMINCYAI-------------------------------HGMGNEAINLFHKM 150
KD+ IWT++I+ YA G GN A++LF KM
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 151 TVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVG 210
+ + P+ ++S L A + + G + M + P + L D+ + G
Sbjct: 303 -IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSG 360
Query: 211 QLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDL 257
L+ + + W+ ++SA HG LG A L D+
Sbjct: 361 SLEASERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDM 404
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 6/160 (3%)
Query: 28 SMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLY 87
S ++ +A ++A+ + + IR LA++L C D SL +G+ I ++ +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 88 GLDLDQQVQTS-LLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINL 146
G + ++ L+ MY KCG A +VFD++ ++L W +M++ Y GM A +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 147 FHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM 186
F M ER D + + ++++ + G + + L F+K
Sbjct: 136 FDSMP--ER---DVVSWNTMVIGYAQDGNLHEALWFYKEF 170
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 175/304 (57%), Gaps = 6/304 (1%)
Query: 4 KCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLAT 63
K + AR +FD ++++SW S+I+GYAQ H EA+ LF MV ++PD + +
Sbjct: 195 KAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVS 254
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKD 123
LSACA G KG+ I +Y L +D + T L+ Y+KCG I A E+F+ +DK
Sbjct: 255 TLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKT 314
Query: 124 LTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFF 183
L W +MI A+HG G ++ F KM V I PD + + S+L+ CSHSGLV++ F
Sbjct: 315 LFTWNAMITGLAMHGNGELTVDYFRKM-VSSGIKPDGVTFISVLVGCSHSGLVDEARNLF 373
Query: 184 KSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLD----VQAQAWSCLLSACR 239
M + + +KHY C+ADLLGR G ++ A + I+ MP D + AWS LL CR
Sbjct: 374 DQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCR 433
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLID-GKELVKECG 298
IHGN+E+ E AA ++ LSP G Y +M +Y + +W+E +R +ID K++ K G
Sbjct: 434 IHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVG 493
Query: 299 RSQV 302
S+V
Sbjct: 494 FSKV 497
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
YAKC + +A IF+L + K + +W +MI G A G+ +D FR+MV + I+PDG T
Sbjct: 293 FYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVT 352
Query: 61 LATVLSACADLGSLSKGQEI-EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+VL C+ G + + + + ++ LY ++ + + + + + G I++A E+ +++
Sbjct: 353 FISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQM 412
Query: 120 TD-----KDLTIWTSMINCYAIHG 138
+ L W+ ++ IHG
Sbjct: 413 PKDGGNREKLLAWSGLLGGCRIHG 436
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 183/305 (60%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y++C + + F+ T + ++W ++++G+ QSG+ EAL +F RM R I + T
Sbjct: 635 LYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFT 694
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ + A ++ ++ +G+++ I G D + +V +L+ MY+KCGSI A + F V+
Sbjct: 695 FGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 754
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K+ W ++IN Y+ HG G+EA++ F +M + + P+ + +L ACSH GLV+ G+
Sbjct: 755 TKNEVSWNAIINAYSKHGFGSEALDSFDQM-IHSNVRPNHVTLVGVLSACSHIGLVDKGI 813
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F+SM+ ++G++P +HY C+ D+L R G L A + IQ MP+ A W LLSAC +
Sbjct: 814 AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 873
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H N+E+GE AA L +L P S +YVL++NLY KW + R + K + KE G+S
Sbjct: 874 HKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933
Query: 301 QVEVK 305
+EVK
Sbjct: 934 WIEVK 938
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 118/221 (53%), Gaps = 6/221 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y NL SA IF + ++ +++ ++I G +Q G+ +A++LF+RM + PD T
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
LA+++ AC+ G+L +GQ++ Y G + +++ +LL++Y+KC I+ A + F
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE 451
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+++ +W M+ Y + + +F +M +EE I+P+ Y SIL C G +E G
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE-IVPNQYTYPSILKTCIRLGDLELGE 510
Query: 181 KFFKSMHEDFGIAPTVKHYTC--LADLLGRVGQLDLAVDAI 219
+ + + Y C L D+ ++G+LD A D +
Sbjct: 511 QIHSQI---IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 1/179 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK L +A I AGK+++SWT+MIAGY Q +AL FR+M+ IR D
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +SACA L +L +GQ+I + G D Q +L+ +YS+CG I+++ F++
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
D W ++++ + G EA+ +F +M E I + + S + A S + ++ G
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMN-REGIDNNNFTFGSAVKAASETANMKQG 711
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 2/217 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y++ + ARR+FD K+ SW +MI+G +++ AEA+ LF M I P
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++VLSAC + SL G+++ + G D V +L+ +Y G++ A +F ++
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D + ++IN + G G +A+ LF +M + + + PD+ S+++ACS G + G
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHL-DGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVD 217
+ + G A K L +L + ++ A+D
Sbjct: 410 Q-LHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 133/289 (46%), Gaps = 13/289 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC ++ +A F T +N++ W M+ Y + +FR+M +I P+ T
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++L C LG L G++I I L+ V + L+ MY+K G + A ++ R
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD+ WT+MI Y + ++A+ F +M ++ I D + T+ + AC+ +++G
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEG- 610
Query: 181 KFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+ +H G + + L L R G+++ + A + AW+ L+S
Sbjct: 611 ---QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI-AWNALVSG 666
Query: 238 CRIHGNVELGELAAAKLS----DLSPGSSGSYVLMANLYTSLGKWKEAH 282
+ GN E +++ D + + GS V A+ ++ + K+ H
Sbjct: 667 FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH 715
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
+L A ++FD + I +W MI A E LF RMV ++ P+ T + VL
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 67 ACADLGSLSKG--QEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL 124
AC GS++ ++I I GL V L+ +YS+ G + AR VFD + KD
Sbjct: 195 ACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 125 TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+ W +MI+ + + EAI LF M V IMP ++S+L AC +E G
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIG 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 114/272 (41%), Gaps = 40/272 (14%)
Query: 54 IRPDGATLATVLSACADL-GSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKA 112
IRP+ TL +L C GSL +G+++ I GLD + + L Y G + A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 113 REVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
+VFD + ++ + W MI A + E LF +M V E + P+ ++ +L AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEACRG 198
Query: 173 SGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPL-------- 224
+ D ++ + G+ + L DL R G +DLA G+ L
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 225 --------DVQAQ------------------AWSCLLSACRIHGNVELGELAAAKLSDLS 258
+ +A+ A+S +LSAC+ ++E+GE + L
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 259 PGSSGSYVLMA--NLYTSLGKWKEA-HIMRNL 287
SS +YV A +LY LG A HI N+
Sbjct: 319 -FSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 186/305 (60%), Gaps = 5/305 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
+AKC + A+ +FD +N +SW SMI+G+ ++G +ALD+FR M D++PDG T+
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
++L+ACA LG+ +G+ I EYI +L+ V T+L+ MY KCG I++ VF+
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEER--IMPDAIVYTSILLACSHSGLVEDG 179
K L+ W SMI A +G A++LF ++ ER + PD++ + +L AC+HSG V
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSEL---ERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+FF+ M E + I P++KHYT + ++LG G L+ A I+ MP++ WS LLSACR
Sbjct: 379 DEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACR 438
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
GNVE+ + AA L L P + YVL++N Y S G ++EA R L+ +++ KE G
Sbjct: 439 KIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGC 498
Query: 300 SQVEV 304
S +EV
Sbjct: 499 SSIEV 503
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 7/188 (3%)
Query: 3 AKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMV--RTDIRPDGAT 60
A ++ A +F KN W ++I G+++S P A+ +F M+ ++P T
Sbjct: 69 ASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLT 128
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+V A LG G+++ + GL+ D ++ ++LHMY CG + +A +F +
Sbjct: 129 YPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI 188
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D+ W SMI +A G+ ++A NLF +M + + + S++ +G +D L
Sbjct: 189 GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR-----NGVSWNSMISGFVRNGRFKDAL 243
Query: 181 KFFKSMHE 188
F+ M E
Sbjct: 244 DMFREMQE 251
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC + +F+ K + W SMI G A +G A+DLF + R+ + PD +
Sbjct: 302 MYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
VL+ACA G + + E + + ++ S+ H
Sbjct: 362 FIGVLTACAHSGEVHRADE-----FFRLMKEKYMIEPSIKH------------------- 397
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+T M+N G+ EA L M VEE D ++++S+L AC G VE
Sbjct: 398 ------YTLMVNVLGGAGLLEEAEALIKNMPVEE----DTVIWSSLLSACRKIGNVE 444
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 231 bits (590), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 195/309 (63%), Gaps = 6/309 (1%)
Query: 1 MYAKCDNLTSARRIFDLT--AGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDG 58
MY+K + ++++F+ + A ++ +W SMI+GY Q+GH + +FR+M+ +IRP+
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T+A++L AC+ +GS+ G+++ + LD + V ++L+ MYSK G+I+ A ++F +
Sbjct: 522 VTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+++ +T+MI Y HGMG AI+LF M E I PDAI + ++L ACS+SGL+++
Sbjct: 582 TKERNSVTYTTMILGYGQHGMGERAISLFLSMQ-ESGIKPDAITFVAVLSACSYSGLIDE 640
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQ-AQAWSCLLSA 237
GLK F+ M E + I P+ +HY C+ D+LGRVG+++ A + ++G+ + A+ W LL +
Sbjct: 641 GLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGS 700
Query: 238 CRIHGNVELGELAAAKLSDLSPGS--SGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVK 295
C++HG +EL E + +L+ G SG VL++N+Y KWK +R + K L K
Sbjct: 701 CKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKK 760
Query: 296 ECGRSQVEV 304
E GRS +E+
Sbjct: 761 EVGRSGIEI 769
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 131/267 (49%), Gaps = 27/267 (10%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGA 59
MYA+ ++ S+RR+FD +NI W +MI Y Q+ E+++LF + + +I D
Sbjct: 260 MYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEV 319
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T SA + L + G++ ++ +L + SL+ MYS+CGS+ K+ VF +
Sbjct: 320 TYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSM 379
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS-------- 171
++D+ W +MI+ + +G+ +E + L ++M ++ D I T++L A S
Sbjct: 380 RERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ-KQGFKIDYITVTALLSAASNLRNKEIG 438
Query: 172 ---HSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQA 228
H+ L+ G++ F+ M+ + L D+ + G + ++ +G +
Sbjct: 439 KQTHAFLIRQGIQ-FEGMN------------SYLIDMYSKSGLIRISQKLFEGSGYAERD 485
Query: 229 QA-WSCLLSACRIHGNVELGELAAAKL 254
QA W+ ++S +G+ E L K+
Sbjct: 486 QATWNSMISGYTQNGHTEKTFLVFRKM 512
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 22/251 (8%)
Query: 1 MYAKCDNLTS------ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI 54
MY C N R++FD KN+++W ++I+ Y ++G AEA F M+R ++
Sbjct: 151 MYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEV 210
Query: 55 RPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDL--------DQQVQTSLLHMYSKC 106
+P + V A + S+ K YGL L D V +S + MY++
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKAN------VFYGLMLKLGDEYVKDLFVVSSAISMYAEL 264
Query: 107 GSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSI 166
G I+ +R VFD ++++ +W +MI Y + E+I LF + + I+ D + Y
Sbjct: 265 GDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLA 324
Query: 167 LLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDV 226
A S VE G +F + ++F P V L + R G + + M +
Sbjct: 325 ASAVSALQQVELGRQFHGFVSKNFRELPIVI-VNSLMVMYSRCGSVHKSFGVFLSMR-ER 382
Query: 227 QAQAWSCLLSA 237
+W+ ++SA
Sbjct: 383 DVVSWNTMISA 393
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD--IRPDGATLATV 64
N AR++FD + W ++I G+ + P EAL + RM +T D T ++
Sbjct: 54 NPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSST 113
Query: 65 LSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMY------SKCGSIQKAREVFDR 118
L ACA+ +L G+ + ++ + + V SL++MY C R+VFD
Sbjct: 114 LKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDN 173
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ K++ W ++I+ Y G EA F M E + P + + ++ A S S ++
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME-VKPSPVSFVNVFPAVSISRSIKK 232
Query: 179 GLKFFKSM--------HEDFGIAPTVKHYTCLADL 205
F+ M + F ++ + Y L D+
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDI 267
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 231 bits (589), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 179/304 (58%), Gaps = 1/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY +C+++ SAR +FD ++ + +MI GYA+ P EAL LFR M ++P+ T
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +VLS+CA LGSL G+ I +Y + +V T+L+ M++KCGS+ A +F+++
Sbjct: 233 LLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD W++MI YA HG +++ +F +M E + PD I + +L ACSH+G VE+G
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMR-SENVQPDEITFLGLLNACSHTGRVEEGR 351
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K+F M FGI P++KHY + DLL R G L+ A + I +P+ W LL+AC
Sbjct: 352 KYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSS 411
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H N++L E + ++ +L G YV+++NLY KW+ +R ++ ++ VK G S
Sbjct: 412 HNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471
Query: 301 QVEV 304
+EV
Sbjct: 472 SIEV 475
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 124/239 (51%), Gaps = 3/239 (1%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
+++ AR +F+ + +I+ + SM GY++ +P E LF ++ I PD T ++L
Sbjct: 78 SMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLK 137
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
ACA +L +G+++ GLD + V +L++MY++C + AR VFDR+ + +
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 127 WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM 186
+ +MI YA NEA++LF +M + + P+ I S+L +C+ G ++ G K+
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQ-GKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKY 255
Query: 187 HEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
+ VK T L D+ + G LD AV + M QAWS ++ A HG E
Sbjct: 256 AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAE 313
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 231 bits (588), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 182/303 (60%), Gaps = 1/303 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y++C + A +F K+ + WT+MI G ++ +AL+LFR M ++ + T
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
VLSAC+DLG+L G+ + ++ ++L V +L++MYS+CG I +AR VF + D
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
KD+ + +MI+ A+HG EAIN F M V P+ + ++L ACSH GL++ GL+
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRDM-VNRGFRPNQVTLVALLNACSHGGLLDIGLE 377
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
F SM F + P ++HY C+ DLLGRVG+L+ A I+ +P++ LLSAC+IH
Sbjct: 378 VFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIH 437
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
GN+ELGE A +L + SG+YVL++NLY S GKWKE+ +R + + KE G S
Sbjct: 438 GNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCST 497
Query: 302 VEV 304
+EV
Sbjct: 498 IEV 500
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 128/298 (42%), Gaps = 59/298 (19%)
Query: 6 DNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVL 65
D++ A +F + N+ +T+MI G+ SG A+ + L+ RM+ + PD + +VL
Sbjct: 75 DSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVL 134
Query: 66 SACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT 125
AC L +EI + G + V ++ +Y K G + A+++FD + D+D
Sbjct: 135 KAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 190
Query: 126 IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKS 185
T MINCY+ G EA+ LF + ++ D + +T+++ + + L+ F+
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIK-----DTVCWTAMIDGLVRNKEMNKALELFRE 245
Query: 186 MHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWS--CLLSACRIHGN 243
M + +V A ++ C+LSAC G
Sbjct: 246 MQME-----------------------------------NVSANEFTAVCVLSACSDLGA 270
Query: 244 VELG-------ELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELV 294
+ELG E +LS+ + + N+Y+ G EA + ++ K+++
Sbjct: 271 LELGRWVHSFVENQRMELSNFVGNA------LINMYSRCGDINEARRVFRVMRDKDVI 322
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 36/211 (17%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY++C ++ ARR+F + K+++S+ +MI+G A G EA++ FR MV RP+ T
Sbjct: 299 MYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVT 358
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +L+AC+ G L G E+ + VF+
Sbjct: 359 LVALLNACSHGGLLDIGLEV----------------------------FNSMKRVFN--V 388
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ + + +++ G EA + +E PD I+ ++L AC G +E G
Sbjct: 389 EPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIE----PDHIMLGTLLSACKIHGNMELGE 444
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQ 211
K K + E P Y L++L G+
Sbjct: 445 KIAKRLFESEN--PDSGTYVLLSNLYASSGK 473
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 183/312 (58%), Gaps = 11/312 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGK-NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
Y+ ++ AR++FD T K NI+ WT+MI+ Y ++ + EA++LF+RM I DG
Sbjct: 109 FYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGV 168
Query: 60 TLATVLSACADLGSLSKGQEI--EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
+ LSACADLG++ G+EI L +D ++ SLL+MY K G +KAR++FD
Sbjct: 169 IVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFD 228
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKM-TVEER----IMPDAIVYTSILLACSH 172
KD+T +TSMI YA++G E++ LF KM T+++ I P+ + + +L+ACSH
Sbjct: 229 ESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSH 288
Query: 173 SGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWS 232
SGLVE+G + FKSM D+ + P H+ C+ DL R G L A + I MP+ W
Sbjct: 289 SGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWR 348
Query: 233 CLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKE 292
LL AC +HGNVELGE ++ +L G YV ++N+Y S G W E MR+ + +
Sbjct: 349 TLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRR 408
Query: 293 LVKECGRSQVEV 304
+ G+S +E+
Sbjct: 409 M---PGKSWIEL 417
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 33 YAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA----CADLGSLSKGQEIEEYIYLYG 88
Y +SG P +AL FR R P +VL A A S G++I + G
Sbjct: 38 YLESGEPIKALLDFRHRFRQS--PSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLG 95
Query: 89 LDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK-DLTIWTSMINCYAIHGMGNEAINLF 147
+ Q+QTSL+ YS G + AR+VFD +K ++ +WT+MI+ Y + EAI LF
Sbjct: 96 FNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELF 155
Query: 148 HKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFF 183
+M E+I D ++ T L AC+ G V+ G + +
Sbjct: 156 KRMEA-EKIELDGVIVTVALSACADLGAVQMGEEIY 190
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 180/305 (59%), Gaps = 1/305 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YA+C L +R++FD K+++ W +MI G Q+ +AL LF+ M ++ +PD T+
Sbjct: 333 YARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
LSAC+ LG+L G I YI Y L L+ + TSL+ MY+KCG+I +A VF +
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
++ +T++I A+HG + AI+ F++M ++ I PD I + +L AC H G+++ G
Sbjct: 453 RNSLTYTAIIGGLALHGDASTAISYFNEM-IDAGIAPDEITFIGLLSACCHGGMIQTGRD 511
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
+F M F + P +KHY+ + DLLGR G L+ A ++ MP++ A W LL CR+H
Sbjct: 512 YFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMH 571
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
GNVELGE AA KL +L P SG YVL+ +Y W++A R +++ + + K G S
Sbjct: 572 GNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSS 631
Query: 302 VEVKA 306
+EV
Sbjct: 632 IEVNG 636
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 136/274 (49%), Gaps = 34/274 (12%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
M+A C ++ +AR++FD + ++++SW +I GY + G +A+ +++ M ++PD T
Sbjct: 200 MFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ ++S+C+ LG L++G+E EY+ GL + + +L+ M+SKCG I +AR +FD +
Sbjct: 260 MIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 121 DKDLTIWTSMINCYAIHGM-------------------------------GNEAINLFHK 149
+ + WT+MI+ YA G+ G +A+ LF +
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 150 MTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRV 209
M PD I L ACS G ++ G+ + + E + ++ V T L D+ +
Sbjct: 380 MQTSN-TKPDEITMIHCLSACSQLGALDVGIWIHRYI-EKYSLSLNVALGTSLVDMYAKC 437
Query: 210 GQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGN 243
G + A+ G+ + ++ ++ +HG+
Sbjct: 438 GNISEALSVFHGIQTR-NSLTYTAIIGGLALHGD 470
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 104/203 (51%), Gaps = 5/203 (2%)
Query: 13 RIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR---TDIRPDGATLATVLSACA 69
+I NI SW I G+++S +P E+ L+++M+R + RPD T + CA
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 70 DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTS 129
DL S G I ++ L+L V + +HM++ CG ++ AR+VFD +DL W
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
+IN Y G +AI ++ K+ E + PD + ++ +CS G + G +F++ + E+
Sbjct: 228 LINGYKKIGEAEKAIYVY-KLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN 286
Query: 190 FGIAPTVKHYTCLADLLGRVGQL 212
G+ T+ L D+ + G +
Sbjct: 287 -GLRMTIPLVNALMDMFSKCGDI 308
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 34/188 (18%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC N++ A +F +N L++T++I G A G + A+ F M+ I PD T
Sbjct: 433 MYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEIT 492
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+LSAC G + G++ Y + + L H
Sbjct: 493 FIGLLSACCHGGMIQTGRD-----YFSQMKSRFNLNPQLKH------------------- 528
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++ M++ G+ EA L M +E DA V+ ++L C G VE G
Sbjct: 529 ------YSIMVDLLGRAGLLEEADRLMESMPME----ADAAVWGALLFGCRMHGNVELGE 578
Query: 181 KFFKSMHE 188
K K + E
Sbjct: 579 KAAKKLLE 586
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 183/306 (59%), Gaps = 4/306 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGAT 60
Y + ++ +A +FD KN+ SWT++I+G++Q+G+ +EAL +F M + ++P+ T
Sbjct: 158 YQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHIT 217
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV- 119
+ +VL ACA+LG L G+ +E Y G + V + + MYSKCG I A+ +F+ +
Sbjct: 218 VVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG 277
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++L W SMI A HG +EA+ LF +M + E PDA+ + +LLAC H G+V G
Sbjct: 278 NQRNLCSWNSMIGSLATHGKHDEALTLFAQM-LREGEKPDAVTFVGLLLACVHGGMVVKG 336
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ FKSM E I+P ++HY C+ DLLGRVG+L A D I+ MP+ A W LL AC
Sbjct: 337 QELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACS 396
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
HGNVE+ E+A+ L L P + G+ V+M+N+Y + KW MR L+ + + K G
Sbjct: 397 FHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGY 456
Query: 300 SQ-VEV 304
S VEV
Sbjct: 457 SYFVEV 462
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 9/211 (4%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
NL AR++FD + +I Y P E++ L+ + +RP T + +
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
A A S + + + G + D T+L+ Y+K G++ AR VFD ++ +D+ +
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPV 150
Query: 127 WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM 186
W +MI Y G A+ LF M + + +T+++ S +G + LK F M
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRK-----NVTSWTTVISGFSQNGNYSEALKMFLCM 205
Query: 187 HEDFGIAPTVKHYTCLADL--LGRVGQLDLA 215
+D + P H T ++ L +G+L++
Sbjct: 206 EKDKSVKPN--HITVVSVLPACANLGELEIG 234
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 1 MYAKCDNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY+KC + A+R+F +L +N+ SW SMI A G EAL LF +M+R +PD
Sbjct: 259 MYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAV 318
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T +L AC G + KGQE + K+ E ++
Sbjct: 319 TFVGLLLACVHGGMVVKGQE-----------------------------LFKSMEEVHKI 349
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+ K L + MI+ G EA +L M ++ PDA+V+ ++L ACS G VE
Sbjct: 350 SPK-LEHYGCMIDLLGRVGKLQEAYDLIKTMPMK----PDAVVWGTLLGACSFHGNVE 402
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 229 bits (583), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/307 (39%), Positives = 185/307 (60%), Gaps = 3/307 (0%)
Query: 1 MYAKCDNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY +T A +F +L++ K+I+ WT M++G++Q+G EAL ++ M + PD A
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T TVL C+ L SL +G+ I I+ DLD+ +L+ MY+KCG ++ + +VFD +
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 120 TDK-DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ ++ W S+IN YA +G +A+ +F M + IMPD I + +L ACSH+G V D
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR-QSHIMPDEITFLGVLTACSHAGKVSD 852
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
G K F+ M +GI V H C+ DLLGR G L A D I+ L A+ WS LL AC
Sbjct: 853 GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGAC 912
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
RIHG+ GE++A KL +L P +S +YVL++N+Y S G W++A+ +R ++ + + K G
Sbjct: 913 RIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPG 972
Query: 299 RSQVEVK 305
S ++V+
Sbjct: 973 YSWIDVE 979
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 10/201 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC L AR+IF+ ++ ++W ++I Y Q + +EA DLF+RM I DGA
Sbjct: 472 MYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC 531
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
LA+ L AC + L +G+++ GLD D +SL+ MYSKCG I+ AR+VF +
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ + ++I Y+ + + EA+ LF +M + + P I + +I+ AC + G
Sbjct: 592 EWSVVSMNALIAGYSQNNL-EEAVVLFQEM-LTRGVNPSEITFATIVEACHKPESLTLGT 649
Query: 181 KF--------FKSMHEDFGIA 193
+F F S E GI+
Sbjct: 650 QFHGQITKRGFSSEGEYLGIS 670
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC+ + +A ++F+ KN + W +MI GYA +G + ++LF M + D T
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++LS CA L G + I L + V +L+ MY+KCG+++ AR++F+R+
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
D+D W ++I Y +EA +LF +M + I+ D S L AC+H
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG-IVSDGACLASTLKACTH 541
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 10/265 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC ++ A + FD K++ +W SM++ Y+ G P + L F + I P+ T
Sbjct: 104 LYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFT 162
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ VLS CA ++ G++I + GL+ + +L+ MY+KC I AR VF+ +
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D + WT + + Y G+ EA+ +F +M +E PD + + +++ G ++D
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMR-DEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCL---LSA 237
F M +P V + + G+ G +A++ M S L LSA
Sbjct: 282 LLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 238 CRIHGNVELGELAAAKLSDLSPGSS 262
I N++LG + A+ L S+
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASN 361
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 116/236 (49%), Gaps = 3/236 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + L AR +F + ++++W MI+G+ + G A++ F M ++ ++ +TL
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+VLSA + +L G + GL + V +SL+ MYSKC ++ A +VF+ + +
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
K+ W +MI YA +G ++ + LF M + D +TS+L C+ S +E G +
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD-FTFTSLLSTCAASHDLEMGSQ 449
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
F + + +A + L D+ + G L+ A + M D W+ ++ +
Sbjct: 450 FHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 122/250 (48%), Gaps = 11/250 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC + AR++F +++S ++IAGY+Q+ + EA+ LF+ M+ + P T
Sbjct: 573 MYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEIT 631
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLD-QQVQTSLLHMYSKCGSIQKAREVFDRV 119
AT++ AC SL+ G + I G + + + SLL MY + +A +F +
Sbjct: 632 FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL 691
Query: 120 TD-KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ K + +WT M++ ++ +G EA+ + +M + ++PD + ++L CS V
Sbjct: 692 SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMR-HDGVLPDQATFVTVLRVCS----VLS 746
Query: 179 GLKFFKSMHE-DFGIAPTVKHYT--CLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
L+ +++H F +A + T L D+ + G + + M +W+ L+
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Query: 236 SACRIHGNVE 245
+ +G E
Sbjct: 807 NGYAKNGYAE 816
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 102/223 (45%), Gaps = 5/223 (2%)
Query: 73 SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMIN 132
+L G+ + + G+D + ++ +++ +Y+KC + A + FD +KD+T W SM++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133
Query: 133 CYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGI 192
Y+ G + + F + E +I P+ ++ +L C+ VE G + SM + G+
Sbjct: 134 MYSSIGKPGKVLRSFVSL-FENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGL 191
Query: 193 APTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAA 252
L D+ + ++ A + + +D W+CL S G E L
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 253 KLSDLSPGSSG-SYVLMANLYTSLGKWKEAHIMRNLIDGKELV 294
++ D ++V + N Y LGK K+A ++ + ++V
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVV 293
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 228 bits (582), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 175/304 (57%), Gaps = 2/304 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y K L SA+RIF ++ +SW++MI G A +G E+ FR + R + P+ +L
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSL 272
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
VLSAC+ GS G+ + ++ G V +L+ MYS+CG++ AR VF+ + +
Sbjct: 273 TGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 122 KDLTI-WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K + WTSMI A+HG G EA+ LF++MT + PD I + S+L ACSH+GL+E+G
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG-VTPDGISFISLLHACSHAGLIEEGE 391
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F M + I P ++HY C+ DL GR G+L A D I MP+ A W LL AC
Sbjct: 392 DYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSS 451
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HGN+EL E +L++L P +SG VL++N Y + GKWK+ +R + + + K S
Sbjct: 452 HGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWS 511
Query: 301 QVEV 304
VEV
Sbjct: 512 LVEV 515
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Query: 1 MYAKCDNLTSARRIFD-LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY++C N+ AR +F+ + + I+SWTSMIAG A G EA+ LF M + PDG
Sbjct: 313 MYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGI 372
Query: 60 TLATVLSACADLGSLSKGQE-IEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
+ ++L AC+ G + +G++ E +Y ++ + + ++ +Y + G +QKA + +
Sbjct: 373 SFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQ 432
Query: 119 VTDKDLTI-WTSMINCYAIHG 138
+ I W +++ + HG
Sbjct: 433 MPIPPTAIVWRTLLGACSSHG 453
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 124/305 (40%), Gaps = 69/305 (22%)
Query: 6 DNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGATLATV 64
D L ARR+ + + +++ GY++S P ++ +F M+R + PD + A V
Sbjct: 53 DALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFV 112
Query: 65 LSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL 124
+ A + SL G ++ +GL+ V T+L+ MY CG ++ AR+VFD + +L
Sbjct: 113 IKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNL 172
Query: 125 TIWTSMIN-CYAIHGMGNE---AINLFHKMTVE---------------------ERI--- 156
W ++I C+ GN+ A +F KM V +RI
Sbjct: 173 VAWNAVITACFR----GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSE 228
Query: 157 MP--DAIVYTSILLACSHSGLVEDGLKFFKSMH--------------------------- 187
MP D + ++++++ +H+G + +F+ +
Sbjct: 229 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
Query: 188 -------EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
E G + V L D+ R G + +A +GM +W+ +++ +
Sbjct: 289 KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAM 348
Query: 241 HGNVE 245
HG E
Sbjct: 349 HGQGE 353
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 228 bits (580), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 176/305 (57%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y + +A ++F+ +N++SWT+MI+G+AQ L L+ +M ++ P+ T
Sbjct: 164 LYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYT 223
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+LSAC G+L +G+ + GL + SL+ MY KCG ++ A +FD+ +
Sbjct: 224 FTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS 283
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+KD+ W SMI YA HG+ +AI LF M + PDAI Y +L +C H+GLV++G
Sbjct: 284 NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR 343
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
KFF M E G+ P + HY+CL DLLGR G L A++ I+ MP+ + W LL +CR+
Sbjct: 344 KFFNLMAEH-GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRV 402
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HG+V G AA + L P + ++V +ANLY S+G WKEA +R L+ K L G S
Sbjct: 403 HGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCS 462
Query: 301 QVEVK 305
+E+
Sbjct: 463 WIEIN 467
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 227 bits (579), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 179/302 (59%), Gaps = 1/302 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y K +LTS+ ++F+ + KN++SW +MI + Q+G + L F R PD AT
Sbjct: 179 YGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATF 238
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
VL +C D+G + Q I I G ++ + T+LL +YSK G ++ + VF +T
Sbjct: 239 LAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITS 298
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
D WT+M+ YA HG G +AI F ++ V I PD + +T +L ACSHSGLVE+G
Sbjct: 299 PDSMAWTAMLAAYATHGFGRDAIKHF-ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKH 357
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
+F++M + + I P + HY+C+ DLLGR G L A I+ MP++ + W LL ACR++
Sbjct: 358 YFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVY 417
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
+ +LG AA +L +L P +YV+++N+Y++ G WK+A +RNL+ K LV+ G S
Sbjct: 418 KDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSY 477
Query: 302 VE 303
+E
Sbjct: 478 IE 479
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 124/248 (50%), Gaps = 15/248 (6%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI--RPDGA 59
Y + + A ++FD ++++SW S+I+GY+ G+ + ++ RM+ +++ RP+
Sbjct: 76 YLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEV 135
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T +++SAC GS +G+ I + +G+ + +V + ++ Y K G + + ++F+ +
Sbjct: 136 TFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDL 195
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE-- 177
+ K+L W +MI + +G+ + + F+ M+ PD + ++L +C G+V
Sbjct: 196 SIKNLVSWNTMIVIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 178 ---DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCL 234
GL F + I T L DL ++G+L+ + + + AW+ +
Sbjct: 255 QGIHGLIMFGGFSGNKCIT------TALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAM 307
Query: 235 LSACRIHG 242
L+A HG
Sbjct: 308 LAAYATHG 315
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y+K L + +F + ++WT+M+A YA G +A+ F MV I PD T
Sbjct: 279 LYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVT 338
Query: 61 LATVLSACADLGSLSKGQE-IEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKA 112
+L+AC+ G + +G+ E Y +D + ++ + + G +Q A
Sbjct: 339 FTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 59 ATLATVLSACA--DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
++L + +C +L L + ++ Y +G DQ L+ Y + G A ++F
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQ-----LVGCYLRLGHDVCAEKLF 89
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE-RIMPDAIVYTSILLACSHSGL 175
D + ++DL W S+I+ Y+ G + + +M + E P+ + + S++ AC + G
Sbjct: 90 DEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGS 149
Query: 176 VEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQL 212
E+G + + FG+ VK + G+ G L
Sbjct: 150 KEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDL 185
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 180/305 (59%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC ++++A+ FD + ++WT+MI+G ++G A +F +M + PD T
Sbjct: 561 MYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+AT+ A + L +L +G++I D V TSL+ MY+KCGSI A +F R+
Sbjct: 621 IATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIE 680
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++T W +M+ A HG G E + LF +M I PD + + +L ACSHSGLV +
Sbjct: 681 MMNITAWNAMLVGLAQHGEGKETLQLFKQMK-SLGIKPDKVTFIGVLSACSHSGLVSEAY 739
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K +SMH D+GI P ++HY+CLAD LGR G + A + I+ M ++ A + LL+ACR+
Sbjct: 740 KHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRV 799
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
G+ E G+ A KL +L P S +YVL++N+Y + KW E + R ++ G ++ K+ G S
Sbjct: 800 QGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFS 859
Query: 301 QVEVK 305
+EVK
Sbjct: 860 WIEVK 864
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 11/232 (4%)
Query: 12 RRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADL 71
R FDL A W +M+AGY QS + L LF M + R D TLATV C L
Sbjct: 477 RHNFDLVA------WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 72 GSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMI 131
++++G+++ Y G DLD V + +L MY KCG + A+ FD + D WT+MI
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 132 NCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFF-KSMHEDF 190
+ +G A ++F +M + ++PD ++ A S +E G + ++ +
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMG-VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 649
Query: 191 GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
P V T L D+ + G +D A + + + + AW+ +L HG
Sbjct: 650 TNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHG 698
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 8/156 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSG-----HPAEALDLFRRMVRTDIR 55
MY+KC +LT ARR+FD ++++SW S++A YAQS + +A LFR + + +
Sbjct: 83 MYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVY 142
Query: 56 PDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREV 115
TL+ +L C G + + Y GLD D+ V +L+++Y K G +++ + +
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 116 FDRVTDKDLTIWTSMINCYAIHGMGNEAINL---FH 148
F+ + +D+ +W M+ Y G EAI+L FH
Sbjct: 203 FEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 23/255 (9%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K AR +FD + ++++SW S+IAG AQ+G EA+ LF +++R ++PD T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDL----DQQVQTSLLHMYSKCGSIQKAREVF 116
+ +VL A + SL +G + + ++++ + + D V T+L+ YS+ +++A +F
Sbjct: 419 MTSVLKAAS---SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVE-ERIMPDAIVYTSILLACSHSGL 175
+R + DL W +M+ Y G++ + LF M + ER D ++ C
Sbjct: 476 ER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER--SDDFTLATVFKTCGFLFA 532
Query: 176 VEDGLKFFKSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPL--DVQAQA 230
+ G K +H G + + + D+ + G + A A +P+ DV A
Sbjct: 533 INQG----KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV---A 585
Query: 231 WSCLLSACRIHGNVE 245
W+ ++S C +G E
Sbjct: 586 WTTMISGCIENGEEE 600
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 16 DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLS 75
D ++ I+ ++ Y SG + L F MV +D+ D T +L+ + SL+
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 76 KGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYA 135
GQ++ GLDL V SL++MY K AR VFD ++++DL W S+I A
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 136 IHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
+G+ EA+ LF ++ + + PD TS+L A S + +GL K +H
Sbjct: 393 QNGLEVEAVCLFMQL-LRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVH 440
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 18/91 (19%)
Query: 97 TSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYA-----IHGMGNEAINLFHKMT 151
+L+ MYSKCGS+ AR VFD++ D+DL W S++ YA + +A LF
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF---- 133
Query: 152 VEERIMPDAIVYTS------ILLACSHSGLV 176
RI+ +VYTS +L C HSG V
Sbjct: 134 ---RILRQDVVYTSRMTLSPMLKLCLHSGYV 161
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 176/305 (57%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y KC L SAR+ FD K ++SW+S+I GYAQ G EA+ LF+R+ + + D
Sbjct: 256 LYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFA 315
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L++++ AD L +G++++ L+ V S++ MY KCG + +A + F +
Sbjct: 316 LSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQ 375
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD+ WT +I Y HG+G +++ +F++M + I PD + Y ++L ACSHSG++++G
Sbjct: 376 LKDVISWTVVITGYGKHGLGKKSVRIFYEM-LRHNIEPDEVCYLAVLSACSHSGMIKEGE 434
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F + E GI P V+HY C+ DLLGR G+L A I MP+ W LLS CR+
Sbjct: 435 ELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRV 494
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HG++ELG+ L + + +YV+M+NLY G W E R L + K L KE G S
Sbjct: 495 HGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMS 554
Query: 301 QVEVK 305
VE++
Sbjct: 555 WVEIE 559
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 5/182 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC A ++FD +N++SW+++++G+ +G +L LF M R I P+ T
Sbjct: 50 MYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFT 109
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+T L AC L +L KG +I + G ++ +V SL+ MYSKCG I +A +VF R+
Sbjct: 110 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKM---TVEERIMPDAIVYTSILLACSHSGLVE 177
D+ L W +MI + G G++A++ F M ++ER PD TS+L ACS +G++
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKER--PDEFTLTSLLKACSSTGMIY 227
Query: 178 DG 179
G
Sbjct: 228 AG 229
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 122/246 (49%), Gaps = 7/246 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI--RPDG 58
MY+KC + A ++F ++++SW +MIAG+ +G+ ++ALD F M +I RPD
Sbjct: 151 MYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ--VQTSLLHMYSKCGSIQKAREVF 116
TL ++L AC+ G + G++I ++ G + SL+ +Y KCG + AR+ F
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
D++ +K + W+S+I YA G EA+ LF ++ E D+ +SI+ + L+
Sbjct: 271 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ-ELNSQIDSFALSSIIGVFADFALL 329
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
G K +++ + D+ + G +D A M L +W+ +++
Sbjct: 330 RQG-KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVIT 387
Query: 237 ACRIHG 242
HG
Sbjct: 388 GYGKHG 393
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 85/178 (47%), Gaps = 3/178 (1%)
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
L ++L C G +G ++ Y+ G L+ L+ MY KC A +VFD +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++++ W+++++ + ++G +++LF +M + I P+ +++ L AC +E G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMG-RQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
L+ G V+ L D+ + G+++ A + + +D +W+ +++
Sbjct: 127 LQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 3 AKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLA 62
A+C ++ AR++F+ ++ ++W +MI+GYAQ G EAL++F M ++ +G +
Sbjct: 185 ARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMI 244
Query: 63 TVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK 122
+VLSAC LG+L +G+ YI + + ++ T+L+ +Y+KCG ++KA EVF + +K
Sbjct: 245 SVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK 304
Query: 123 DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKF 182
++ W+S +N A++G G + + LF M ++ + P+A+ + S+L CS G V++G +
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLELFSLMK-QDGVTPNAVTFVSVLRGCSVVGFVDEGQRH 363
Query: 183 FKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
F SM +FGI P ++HY CL DL R G+L+ AV IQ MP+ A WS LL A R++
Sbjct: 364 FDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYK 423
Query: 243 NVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQV 302
N+ELG LA+ K+ +L + G+YVL++N+Y W +R + K + K+ G S +
Sbjct: 424 NLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVM 483
Query: 303 EVKA 306
EV
Sbjct: 484 EVNG 487
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT--DIRPDGATLATVL 65
L A +I D + + + SMI + +S P ++ D +RR++ + D++PD T+ ++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 66 SACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYS--------------------- 104
AC L G ++ G D D VQT L+ +Y+
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 105 ----------KCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE 154
+CG + AR++F+ + ++D W +MI+ YA G EA+N+FH M +E
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 155 RIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDL 214
+ + + S+L AC+ G ++ G ++ S E I TV+ T L DL + G ++
Sbjct: 236 -VKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 215 AVDAIQGMPLDVQAQAWSCLLSACRIHG 242
A++ GM + WS L+ ++G
Sbjct: 294 AMEVFWGME-EKNVYTWSSALNGLAMNG 320
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC ++ A +F KN+ +W+S + G A +G + L+LF M + + P+ T
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 61 LATVLSACADLGSLSKGQE-IEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+VL C+ +G + +GQ + +G++ + L+ +Y++ G ++ A + ++
Sbjct: 344 FVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Query: 120 TDKD-LTIWTSMIN 132
K +W+S+++
Sbjct: 404 PMKPHAAVWSSLLH 417
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 180/304 (59%), Gaps = 4/304 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM-VRTDIRPDGAT 60
Y ++ +AR++FD +N++SW +MI GY Q+ P E + LF+ M T + PD T
Sbjct: 217 YCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVT 276
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +VL A +D G+LS G+ ++ LD +V T++L MYSKCG I+KA+ +FD +
Sbjct: 277 ILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP 336
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K + W +MI+ YA++G A++LF M +EE+ PD I +++ AC+H GLVE+G
Sbjct: 337 EKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK--PDEITMLAVITACNHGGLVEEGR 394
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K+F M E G+ ++HY C+ DLLGR G L A D I MP + S LSAC
Sbjct: 395 KWFHVMRE-MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQ 453
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
+ ++E E K +L P + G+YVL+ NLY + +W + +++N++ + KE G S
Sbjct: 454 YKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCS 513
Query: 301 QVEV 304
+E+
Sbjct: 514 LIEI 517
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 112/244 (45%), Gaps = 11/244 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK + AR FD ++ +SWT++I+GY + G A LF +M D
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVI 178
Query: 61 LATVLSACADLGSLSKGQEI-EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
++ G ++ + + +E + + T+++H Y I AR++FD +
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMTHKTVI-----TWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+++L W +MI Y + E I LF +M + PD + S+L A S +G + G
Sbjct: 234 PERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG 293
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
++ + + VK T + D+ + G+++ A MP + Q +W+ ++
Sbjct: 294 -EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAMIHGYA 351
Query: 240 IHGN 243
++GN
Sbjct: 352 LNGN 355
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 129/300 (43%), Gaps = 29/300 (9%)
Query: 11 ARRIFDLTAGKN--ILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGATLATVLSA 67
AR++FD ++ LS SMI Y ++ ++ L+R + + T PD T T+ +
Sbjct: 29 ARKLFDQRPQRDDSFLS-NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKS 87
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
C+ + +G ++ I+ +G D V T ++ MY+K G + AR FD + + W
Sbjct: 88 CSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSW 147
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM- 186
T++I+ Y G + A LF +M + D ++Y +++ SG + + F M
Sbjct: 148 TALISGYIRCGELDLASKLFDQMPH----VKDVVIYNAMMDGFVKSGDMTSARRLFDEMT 203
Query: 187 HEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA-CRIHGNVE 245
H+ T+ H C + +D A MP + +W+ ++ C+ E
Sbjct: 204 HKTVITWTTMIHGYC------NIKDIDAARKLFDAMP-ERNLVSWNTMIGGYCQNKQPQE 256
Query: 246 ----LGELAAAKLSDLSPGSSGSYVLMANLYT----SLGKWKEAHIMRNLIDGKELVKEC 297
E+ A + L P ++ + SLG+W + R +D K VK C
Sbjct: 257 GIRLFQEMQAT--TSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKK--VKVC 312
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC + A+RIFD K + SW +MI GYA +G+ ALDLF M+ + +PD T
Sbjct: 318 MYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEIT 376
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREV 115
+ V++AC G + +G++ + GL+ + ++ + + GS+++A ++
Sbjct: 377 MLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDL 431
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 180/305 (59%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC + +A +F + ++SW +MI G+AQ+G P +AL+ F +M ++PD T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+V++A A+L + I + LD + V T+L+ MY+KCG+I AR +FD ++
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++ +T W +MI+ Y HG G A+ LF +M + I P+ + + S++ ACSHSGLVE GL
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQ-KGTIKPNGVTFLSVISACSHSGLVEAGL 559
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K F M E++ I ++ HY + DLLGR G+L+ A D I MP+ + +L AC+I
Sbjct: 560 KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H NV E AA +L +L+P G +VL+AN+Y + W++ +R + + L K G S
Sbjct: 620 HKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679
Query: 301 QVEVK 305
VE+K
Sbjct: 680 MVEIK 684
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + AR++FD ++++SW +++AGY+Q+G AL++ + M +++P T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +VL A + L +S G+EI Y G D + T+L+ MY+KCGS++ AR++FD +
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++++ W SMI+ Y + EA+ +F KM ++E + P + L AC+ G +E G
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKM-LDEGVKPTDVSVMGALHACADLGDLERG- 356
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
+F + + G+ V L + + ++D A
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 6/261 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC +L +AR++FD +N++SW SMI Y Q+ +P EA+ +F++M+ ++P +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ L ACADLG L +G+ I + GLD + V SL+ MY KC + A +F ++
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ L W +MI +A +G +A+N F +M + PD Y S++ A + +
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMR-SRTVKPDTFTYVSVITAIAELSITHHA- 457
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K+ + + V T L D+ + G + +A I M + W+ ++
Sbjct: 458 KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGT 516
Query: 241 HGNVELGELAAAKLSDLSPGS 261
HG G+ A ++ G+
Sbjct: 517 HG---FGKAALELFEEMQKGT 534
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 9/259 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
++ + ++ A R+F+ K + + +M+ G+A+ +AL F RM D+ P
Sbjct: 78 LFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYN 137
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+L C D L G+EI + G LD T L +MY+KC + +AR+VFDR+
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++DL W +++ Y+ +GM A+ + M EE + P I S+L A S L+ G
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMC-EENLKPSFITIVSVLPAVSALRLISVG- 255
Query: 181 KFFKSMH---EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
K +H G V T L D+ + G L+ A GM L+ +W+ ++ A
Sbjct: 256 ---KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDA 311
Query: 238 CRIHGNVELGELAAAKLSD 256
+ N + L K+ D
Sbjct: 312 YVQNENPKEAMLIFQKMLD 330
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 179/305 (58%), Gaps = 2/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y + + A+ +FD +N +SW ++IAG+A+ +AL+LF+ M+R RP +
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A++ AC+ G L +G+ + Y+ G L +LL MY+K GSI AR++FDR+
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D+ W S++ YA HG G EA+ F +M I P+ I + S+L ACSHSGL+++G
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR-RVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+++ M +D GI P HY + DLLGR G L+ A+ I+ MP++ A W LL+ACR+
Sbjct: 384 HYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 442
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H N ELG AA + +L P G +V++ N+Y S G+W +A +R + + KE S
Sbjct: 443 HKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 502
Query: 301 QVEVK 305
VE++
Sbjct: 503 WVEIE 507
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 98/179 (54%), Gaps = 1/179 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC +L AR++F+ ++ ++WT++I+GY+Q P +AL F +M+R P+ T
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L++V+ A A G ++ + G D + V ++LL +Y++ G + A+ VFD +
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++ W ++I +A +A+ LF M + + P Y S+ ACS +G +E G
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGM-LRDGFRPSHFSYASLFGACSSTGFLEQG 281
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 22/264 (8%)
Query: 54 IRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAR 113
I D T+L C L +G+ + +I D + +LL+MY+KCGS+++AR
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 114 EVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS-- 171
+VF+++ +D WT++I+ Y+ H +A+ F++M + P+ +S++ A +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM-LRFGYSPNEFTLSSVIKAAAAE 174
Query: 172 HSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLD---LAVDAIQGMPLDVQA 228
G L F G V + L DL R G +D L DA++ DV
Sbjct: 175 RRGCCGHQLHGFCV---KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN-DV-- 228
Query: 229 QAWSCLLSA-CRIHGNVELGELAAAKLSDLSPGSSGSYVLM-----ANLYTSLGKWKEAH 282
+W+ L++ R G + EL L D S SY + + + GKW A+
Sbjct: 229 -SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 283 IMRNLIDGKELVKECGRSQVEVKA 306
++++ G++LV G + +++ A
Sbjct: 288 MIKS---GEKLVAFAGNTLLDMYA 308
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 172/303 (56%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC +L +AR +FD + ++SW S+I GY+Q+G EAL +F M+ I PD T
Sbjct: 260 MYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVT 319
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+V+ A G GQ I Y+ G D + +L++MY+K G + A++ F+ +
Sbjct: 320 FLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE 379
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD WT +I A HG GNEA+++F +M + PD I Y +L ACSH GLVE+G
Sbjct: 380 KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQ 439
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++F M + G+ PTV+HY C+ D+L R G+ + A ++ MP+ W LL+ C I
Sbjct: 440 RYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDI 499
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H N+EL + + +++ SG YVL++N+Y G+W + ++R + K + K G S
Sbjct: 500 HENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHS 559
Query: 301 QVE 303
VE
Sbjct: 560 SVE 562
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 11/247 (4%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
NL+ AR +F+ ++ W SMI GY+ S +P +AL ++ M+R PD T VL
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
AC+ L + G + ++ G +++ V T LLHMY CG + VF+ + ++
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 127 WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM 186
W S+I+ + + ++AI F +M + + + +L+AC + G K+F
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQ-SNGVKANETIMVDLLVACGRCKDIVTG-KWFHGF 233
Query: 187 HEDFGIAPTVKHY--------TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
+ G P + T L D+ + G L A GMP + +W+ +++
Sbjct: 234 LQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIITGY 292
Query: 239 RIHGNVE 245
+G+ E
Sbjct: 293 SQNGDAE 299
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 21/256 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY C + R+F+ N+++W S+I+G+ + ++A++ FR M ++ +
Sbjct: 151 MYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETI 210
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQ----------TSLLHMYSKCGSIQ 110
+ +L AC + G+ + L GL D Q TSL+ MY+KCG ++
Sbjct: 211 MVDLLVACGRCKDIVTGKWFHGF--LQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLR 268
Query: 111 KAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
AR +FD + ++ L W S+I Y+ +G EA+ +F M ++ I PD + + S++ A
Sbjct: 269 TARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM-LDLGIAPDKVTFLSVIRAS 327
Query: 171 SHSGLVEDGLKFFKSMH---EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQ 227
G + G +S+H G L ++ + G + A A + +
Sbjct: 328 MIQGCSQLG----QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KKD 382
Query: 228 AQAWSCLLSACRIHGN 243
AW+ ++ HG+
Sbjct: 383 TIAWTVVIIGLASHGH 398
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 170/302 (56%), Gaps = 3/302 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y K +LT A R+F A N+++W +MIA Y +A+ LF RMV + +P T
Sbjct: 477 LYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSIT 535
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L T+L AC + GSL +GQ I YI +++ + +L+ MY+KCG ++K+RE+FD
Sbjct: 536 LVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN 595
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD W MI+ Y +HG AI LF +M E + P + ++L AC+H+GLVE G
Sbjct: 596 QKDAVCWNVMISGYGMHGDVESAIALFDQME-ESDVKPTGPTFLALLSACTHAGLVEQGK 654
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K F MH+ + + P +KHY+CL DLL R G L+ A + MP W LLS+C
Sbjct: 655 KLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMT 713
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HG E+G A + P + G Y+++AN+Y++ GKW+EA R ++ + K G S
Sbjct: 714 HGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Query: 301 QV 302
V
Sbjct: 774 VV 775
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 125/250 (50%), Gaps = 13/250 (5%)
Query: 1 MYAKCDNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY K + L+ A ++F ++ N +W +M+ GY + + ++LFR++ I D A
Sbjct: 375 MYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSA 434
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ +V+S+C+ +G++ G+ + Y+ LDL V SL+ +Y K G + A +F
Sbjct: 435 SATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE- 493
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
D ++ W +MI Y +AI LF +M V E P +I ++L+AC ++G +E G
Sbjct: 494 ADTNVITWNAMIASYVHCEQSEKAIALFDRM-VSENFKPSSITLVTLLMACVNTGSLERG 552
Query: 180 L---KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQ-GMPLDVQAQAWSCLL 235
++ + ++ + L D+ + G L+ + + G D A W+ ++
Sbjct: 553 QMIHRYITETEHEMNLSLSAA----LIDMYAKCGHLEKSRELFDAGNQKD--AVCWNVMI 606
Query: 236 SACRIHGNVE 245
S +HG+VE
Sbjct: 607 SGYGMHGDVE 616
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 4/185 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM--VRTDI-RPD 57
Y+KC L A +FD +++++WT++I+G+ Q+G L +M +D+ +P+
Sbjct: 170 FYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPN 229
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
TL AC++LG+L +G+ + + GL + VQ+S+ YSK G+ +A F
Sbjct: 230 PRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFR 289
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+ D+D+ WTS+I A G E+ ++F +M + + PD +V + ++ LV
Sbjct: 290 ELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ-NKGMHPDGVVISCLINELGKMMLVP 348
Query: 178 DGLKF 182
G F
Sbjct: 349 QGKAF 353
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y+K N + A F +++ SWTS+IA A+SG E+ D+F M + PDG
Sbjct: 274 FYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++ +++ + + +G+ ++ + LD V SLL MY K + A ++F R++
Sbjct: 334 ISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRIS 393
Query: 121 DK-DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++ + W +M+ Y + I LF K+ I D+ TS++ +CSH G V G
Sbjct: 394 EEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQ-NLGIEIDSASATSVISSCSHIGAVLLG 452
Query: 180 LKFFKSMH---EDFGIAPTVKHYTCLADLLGRVGQLDLA 215
KS+H + T+ L DL G++G L +A
Sbjct: 453 ----KSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVA 487
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 5/176 (2%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
NL+S R+F L ++I W S+I + +G A +L F M+ + PD T V+S
Sbjct: 76 NLSS--RVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVS 133
Query: 67 ACADLGSLSKGQEIEEYIYLYG-LDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT 125
ACA+L G + + +G D + V S ++ YSKCG +Q A VFD + D+D+
Sbjct: 134 ACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVV 193
Query: 126 IWTSMINCYAIHGMGNEAINLFHKM--TVEERIMPDAIVYTSILLACSHSGLVEDG 179
WT++I+ + +G + KM + P+ ACS+ G +++G
Sbjct: 194 AWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEG 249
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 182/306 (59%), Gaps = 3/306 (0%)
Query: 2 YAKCDNLTSARRIFDLTA--GKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
Y+K ++ AR +FD KN+++WT +IAGYA+ G EA L +MV + ++ D A
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ ++L+AC + G LS G I + L + V +LL MY+KCG+++KA +VF+ +
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 376
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
KDL W +M++ +HG G EAI LF +M E I PD + + ++L +C+H+GL+++G
Sbjct: 377 PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR-REGIRPDKVTFIAVLCSCNHAGLIDEG 435
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ +F SM + + + P V+HY CL DLLGRVG+L A+ +Q MP++ W LL ACR
Sbjct: 436 IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACR 495
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+H V++ + L L P G+Y L++N+Y + W+ +R+ + + K G
Sbjct: 496 MHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGA 555
Query: 300 SQVEVK 305
S VE++
Sbjct: 556 SSVELE 561
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 47/328 (14%)
Query: 5 CDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATV 64
C A R+F+ N+ S+I +AQ+ P +A +F M R + D T +
Sbjct: 64 CRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFL 123
Query: 65 LSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKC------------------ 106
L AC+ L + + +I GL D V +L+ YS+C
Sbjct: 124 LKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 107 ---------------GSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMT 151
G ++ AR +FD + +DL W +M++ YA ++A LF KM
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 152 VEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQ 211
ER + + ++++++ S +G +E F M A V +T + G
Sbjct: 244 --ER---NTVSWSTMVMGYSKAGDMEMARVMFDKMPLP---AKNVVTWTIIIAGYAEKGL 295
Query: 212 L---DLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLM 268
L D VD + L A A +L+AC G + LG + L + GS+ +YVL
Sbjct: 296 LKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN-AYVLN 354
Query: 269 A--NLYTSLGKWKEAHIMRNLIDGKELV 294
A ++Y G K+A + N I K+LV
Sbjct: 355 ALLDMYAKCGNLKKAFDVFNDIPKKDLV 382
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC NL A +F+ K+++SW +M+ G GH EA++LF RM R IRPD T
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGL----DLDQQVQ--TSLLHMYSKCGSIQKARE 114
VL +C G + +G + Y Y + DL QV+ L+ + + G +++A +
Sbjct: 419 FIAVLCSCNHAGLIDEGID-----YFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIK 473
Query: 115 VFDRVT-DKDLTIWTSMINCYAIHG 138
V + + ++ IW +++ +H
Sbjct: 474 VVQTMPMEPNVVIWGALLGACRMHN 498
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 172/305 (56%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC + AR IFD K+++SWTSMI Y +S E LF +V + RP+ T
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A VL+ACADL + G+++ Y+ G D +SL+ MY+KCG+I+ A+ V D
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
DL WTS+I A +G +EA+ F + ++ PD + + ++L AC+H+GLVE GL
Sbjct: 382 KPDLVSWTSLIGGCAQNGQPDEALKYF-DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL 440
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+FF S+ E ++ T HYTCL DLL R G+ + I MP+ W+ +L C
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCST 500
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
+GN++L E AA +L + P + +YV MAN+Y + GKW+E MR + + K G S
Sbjct: 501 YGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSS 560
Query: 301 QVEVK 305
E+K
Sbjct: 561 WTEIK 565
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 139/277 (50%), Gaps = 12/277 (4%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGAT 60
YA+ L AR++FD K+ SWT+M+ GY + P EAL L+ M R + RP+ T
Sbjct: 161 YAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT 220
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++ ++A A + + +G+EI +I GLD D+ + +SL+ MY KCG I +AR +FD++
Sbjct: 221 VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV 280
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVE-ERIMPDAIVYTSILLACSHSGLVEDG 179
+KD+ WTSMI+ Y E +LF ++ ER P+ + +L AC+ E G
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER--PNEYTFAGVLNACADLTTEELG 338
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ M G P + L D+ + G ++ A + G P +W+ L+ C
Sbjct: 339 KQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCA 396
Query: 240 IHGNVELGELAAAKLSD--LSPGSSGSYVLMANLYTS 274
+G + A K D L G+ +V N+ ++
Sbjct: 397 QNGQPD----EALKYFDLLLKSGTKPDHVTFVNVLSA 429
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 55 RPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKARE 114
+P +T ++ C+ +L +G+++ E+I G + LL MY+KCGS+ AR+
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 115 VFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
VFD + ++DL W M+N YA G+ EA LF +MT + D+ +T+++
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK-----DSYSWTAMVTGYVKKD 196
Query: 175 LVEDGLKFFKSMHEDFGIAPTV 196
E+ L + M P +
Sbjct: 197 QPEEALVLYSLMQRVPNSRPNI 218
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 224 bits (572), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 182/304 (59%), Gaps = 1/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK + AR IF+ ++++S T++IAGYAQ G EAL++F R+ + P+ T
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT 256
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A++L+A + L L G++ ++ L +Q SL+ MYSKCG++ AR +FD +
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++ W +M+ Y+ HG+G E + LF M E+R+ PDA+ ++L CSH + + GL
Sbjct: 317 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376
Query: 181 KFFKSM-HEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
F M ++G P +HY C+ D+LGR G++D A + I+ MP A LL ACR
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACR 436
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+H +V++GE +L ++ P ++G+YV+++NLY S G+W + + +R ++ K + KE GR
Sbjct: 437 VHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGR 496
Query: 300 SQVE 303
S ++
Sbjct: 497 SWIQ 500
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 136/243 (55%), Gaps = 5/243 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y KCD L AR++ D KN++SWT+MI+ Y+Q+GH +EAL +F M+R+D +P+ T
Sbjct: 96 FYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFT 155
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
ATVL++C L G++I I + D V +SLL MY+K G I++ARE+F+ +
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++D+ T++I YA G+ EA+ +FH++ E + P+ + Y S+L A S L++ G
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLH-SEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 181 KFF-KSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ + + +++ L D+ + G L A MP + A +W+ +L
Sbjct: 275 QAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYS 331
Query: 240 IHG 242
HG
Sbjct: 332 KHG 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKD 123
+L+AC D +L GQ + ++ ++T LL Y KC ++ AR+V D + +K+
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 124 LTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFF 183
+ WT+MI+ Y+ G +EA+ +F +M + P+ + ++L +C + GL
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSC----IRASGLGLG 172
Query: 184 KSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K +H + + + L D+ + GQ+ A + + +P + SC I
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP---ERDVVSC---TAII 226
Query: 241 HGNVELG--ELAAAKLSDL-SPGSSGSYVLMANLYTSL--------GKWKEAHIMR 285
G +LG E A L S G S +YV A+L T+L GK H++R
Sbjct: 227 AGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR 282
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 177/305 (58%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK L AR+ FD +++ WTS+I+GY Q+ EAL L+RRM I P+ T
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+A+VL AC+ L +L G+++ + +G L+ + ++L MYSKCGS++ VF R
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+KD+ W +MI+ + +G G+EA+ LF +M + E + PD + + +I+ ACSH G VE G
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFEEM-LAEGMEPDDVTFVNIISACSHKGFVERGW 544
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F M + G+ P V HY C+ DLL R GQL A + I+ +D W LLSAC+
Sbjct: 545 FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKN 604
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HG ELG A KL L S +YV ++ +YT+LG+ ++ + + + KE G S
Sbjct: 605 HGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCS 664
Query: 301 QVEVK 305
+E+K
Sbjct: 665 WIELK 669
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 159/326 (48%), Gaps = 56/326 (17%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC++L A ++FD + +N ++W++M+ GY+Q+G EA+ LF RM I+P T
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ VL+AC+D+ L +G+++ ++ G + T+L+ MY+K G + AR+ FD +
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ 384
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS--------- 171
++D+ +WTS+I+ Y + EA+ L+ +M I+P+ S+L ACS
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKT-AGIIPNDPTMASVLKACSSLATLELGK 443
Query: 172 ----HS----------------------GLVEDG-LKFFKSMHEDFGIAPTVKHYTCLAD 204
H+ G +EDG L F ++ ++D V + +
Sbjct: 444 QVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD------VVSWNAMIS 497
Query: 205 LLGRVGQLDLAVDAIQGM------PLDVQAQAWSCLLSACRIHGNVELGELAAAKLSD-- 256
L GQ D A++ + M P DV + ++SAC G VE G +SD
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDV---TFVNIISACSHKGFVERGWFYFNMMSDQI 554
Query: 257 -LSPGSSGSYVLMANLYTSLGKWKEA 281
L P Y M +L + G+ KEA
Sbjct: 555 GLDP-KVDHYACMVDLLSRAGQLKEA 579
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEA---LDLFRRMVRTDIRPD 57
YAKC L A IF+ K+++SW S+I GY+Q+G + + + LFR M DI P+
Sbjct: 58 FYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPN 117
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
TLA + A + L S + G++ + D V TSL+ MY K G ++ +VF
Sbjct: 118 AYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFA 177
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDA-IVYTSIL 167
+ +++ W++M++ YA G EAI +F+ E+ D+ V+T++L
Sbjct: 178 YMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVL 228
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 13/243 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA- 59
MY K + ++F +N +W++M++GYA G EA+ +F +R + +G+
Sbjct: 162 MYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE--KEEGSD 219
Query: 60 ---TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
VLS+ A + G++I GL + +L+ MYSKC S+ +A ++F
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMF 279
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
D D++ W++M+ Y+ +G EA+ LF +M I P +L ACS +
Sbjct: 280 DSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM-FSAGIKPSEYTIVGVLNACSDICYL 338
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPL--DVQAQAWSCL 234
E+G K S G + T L D+ + G L DA +G + W+ L
Sbjct: 339 EEG-KQLHSFLLKLGFERHLFATTALVDMYAKAGCL---ADARKGFDCLQERDVALWTSL 394
Query: 235 LSA 237
+S
Sbjct: 395 ISG 397
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 99/240 (41%), Gaps = 18/240 (7%)
Query: 51 RTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQ 110
+T++ P +TL L+ + +L G+ + I G Q L++ Y+KCG +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 111 KAREVFDRVTDKDLTIWTSMINCYAIHG---MGNEAINLFHKMTVEERIMPDAIVYTSIL 167
KA +F+ + KD+ W S+I Y+ +G + LF +M ++ I+P+A I
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQD-ILPNAYTLAGIF 125
Query: 168 LACS--HSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLD 225
A S S V FG + T L + + G ++ + MP +
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFG---DIYVDTSLVGMYCKAGLVEDGLKVFAYMP-E 181
Query: 226 VQAQAWSCLLSACRIHGNVELG-ELAAAKLSDLSPGSSGSYV-------LMANLYTSLGK 277
WS ++S G VE ++ L + GS YV L A +Y LG+
Sbjct: 182 RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 120/302 (39%), Positives = 176/302 (58%), Gaps = 3/302 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGK-NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIR-PDG 58
+Y++C+ + + IFD + +I W SMI+G+ + +AL LFRRM +T + P+
Sbjct: 460 VYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNE 519
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
+ ATVLS+C+ L SL G++ + G D V+T+L MY KCG I AR+ FD
Sbjct: 520 TSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDA 579
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
V K+ IW MI+ Y +G G+EA+ L+ KM + PD I + S+L ACSHSGLVE
Sbjct: 580 VLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM-ISSGEKPDGITFVSVLTACSHSGLVET 638
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
GL+ SM GI P + HY C+ D LGR G+L+ A + P + W LLS+C
Sbjct: 639 GLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSC 698
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
R+HG+V L A KL L P SS +YVL++N Y+SL +W ++ ++ L++ + K G
Sbjct: 699 RVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPG 758
Query: 299 RS 300
+S
Sbjct: 759 QS 760
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 112/210 (53%), Gaps = 2/210 (0%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
++ + RRIF ++ +W +M++GY+ H EA+ FR+M +++PD TL+ +LS
Sbjct: 365 DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILS 424
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR-VTDKDLT 125
+CA L L G++I + + + + + L+ +YS+C ++ + +FD + + D+
Sbjct: 425 SCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIA 484
Query: 126 IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKS 185
W SMI+ + + + +A+ LF +M + P+ + ++L +CS + G +F
Sbjct: 485 CWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGL 544
Query: 186 MHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
+ + ++ + T L D+ + G++D A
Sbjct: 545 VVKSGYVSDSFVE-TALTDMYCKCGEIDSA 573
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 19/251 (7%)
Query: 1 MYAKCDNLTS-ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MYAKC + R+F+ + N +S+T++I G A+ EA+ +FR M ++ D
Sbjct: 182 MYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
Query: 60 TLATVLSACAD---LGSLSK--GQEIEEYIYLYGLDL----DQQVQTSLLHMYSKCGSIQ 110
L+ +LS A SLS+ G E+ + I+ L L D + SLL +Y+K +
Sbjct: 242 CLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMN 301
Query: 111 KAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
A +F + + ++ W MI + ++++ +M + P+ + S+L AC
Sbjct: 302 GAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMR-DSGFQPNEVTCISVLGAC 360
Query: 171 SHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMP---LDVQ 227
SG VE G + F S+ + P+V + + + A+ + M L
Sbjct: 361 FRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPD 415
Query: 228 AQAWSCLLSAC 238
S +LS+C
Sbjct: 416 KTTLSVILSSC 426
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 12/213 (5%)
Query: 4 KCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLAT 63
K +L A +FD ++++SW +MI+ + G +AL +++RMV P TLA+
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSI-QKAREVFDRVTDK 122
VLSAC+ + G GLD + V +LL MY+KCG I VF+ ++
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 123 DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSIL-LACSHSGLVEDGLK 181
+ +T++I A EA+ +F ++ E+ + D++ ++IL ++ G
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMF-RLMCEKGVQVDSVCLSNILSISAPREGC------ 256
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDL 214
S+ E +G K CLA LG G L L
Sbjct: 257 --DSLSEIYG-NELGKQIHCLALRLGFGGDLHL 286
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 224 bits (570), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 185/308 (60%), Gaps = 3/308 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y+KC L +A +F+ K+++SW ++I GY EAL LF+ M+R+ P+ T
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 61 LATVLSACADLGSLSKGQEIEEYI--YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
+ ++L ACA LG++ G+ I YI L G+ ++TSL+ MY+KCG I+ A +VF+
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ K L+ W +MI +A+HG + + +LF +M + I PD I + +L ACSHSG+++
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR-KIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
G F++M +D+ + P ++HY C+ DLLG G A + I M ++ W LL AC
Sbjct: 489 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 548
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
++HGNVELGE A L + P + GSYVL++N+Y S G+W E R L++ K + K G
Sbjct: 549 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 608
Query: 299 RSQVEVKA 306
S +E+ +
Sbjct: 609 CSSIEIDS 616
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 139/245 (56%), Gaps = 3/245 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YA + +A+++FD K+++SW +MI+GYA++G+ EAL+LF+ M++T++RPD +T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
TV+SACA GS+ G+++ +I +G + ++ +L+ +YSKCG ++ A +F+R+
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
KD+ W ++I Y + EA+ LF +M + P+ + SIL AC+H G ++ G
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEM-LRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 182 FFKSMHEDF-GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ + G+ T L D+ + G ++ A + L +W+ ++ +
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAM 447
Query: 241 HGNVE 245
HG +
Sbjct: 448 HGRAD 452
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 40/264 (15%)
Query: 6 DNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVL 65
+ L A +F N+L W +M G+A S P AL L+ M+ + P+ T VL
Sbjct: 82 EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 141
Query: 66 SACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR------- 118
+CA + +GQ+I ++ G DLD V TSL+ MY + G ++ A +VFD+
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV 201
Query: 119 ------------------------VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE 154
+ KD+ W +MI+ YA G EA+ LF M ++
Sbjct: 202 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM-MKT 260
Query: 155 RIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH---EDFGIAPTVKHYTCLADLLGRVGQ 211
+ PD +++ AC+ SG +E G + +H +D G +K L DL + G+
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELG----RQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 212 LDLAVDAIQGMPLDVQAQAWSCLL 235
L+ A + +P +W+ L+
Sbjct: 317 LETACGLFERLPYK-DVISWNTLI 339
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 176/292 (60%), Gaps = 4/292 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIR--PDGA 59
Y+K + A +F+ + KN++SW ++I+G+ +G P E L+ F ++ +++R PD
Sbjct: 431 YSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAY 490
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
TL+T+LS C SL G + Y+ +G + + +L++MYS+CG+IQ + EVF+++
Sbjct: 491 TLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQM 550
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++KD+ W S+I+ Y+ HG G A+N + M E +++PDA ++++L ACSH+GLVE+G
Sbjct: 551 SEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG 610
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA--VDAIQGMPLDVQAQAWSCLLSA 237
L+ F SM E G+ V H++CL DLLGR G LD A + I + + W L SA
Sbjct: 611 LEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSA 670
Query: 238 CRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLID 289
C HG+++LG++ A L + YV ++N+Y G WKEA R I+
Sbjct: 671 CAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAIN 722
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 48/287 (16%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+ ++ +A ++F+ K++++W +MI+ Y Q+ A+ +++RM ++PD T
Sbjct: 332 MYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT 391
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++L+ DL L + ++ I +GL ++ +L+ YSK G I+KA +F+R
Sbjct: 392 FGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSL 448
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE-RIMPDAIVYTSILLAC--------- 170
K+L W ++I+ + +G E + F + E RI+PDA +++L C
Sbjct: 449 RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLG 508
Query: 171 --------------------------SHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLAD 204
S G +++ L+ F M E V + L
Sbjct: 509 SQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSE-----KDVVSWNSLIS 563
Query: 205 LLGRVGQLDLAVDAIQGMPLDVQ----AQAWSCLLSACRIHGNVELG 247
R G+ + AV+ + M + + A +S +LSAC G VE G
Sbjct: 564 AYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG 610
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Query: 4 KCDNLTSARRIFD-LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLA 62
K ++ A +FD + ++ W +MI G +SG+ +++LFR M + +R D A
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
Query: 63 TVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK 122
T+LS C D GSL G+++ + G + V +L+ MY C + A VF+ +
Sbjct: 195 TILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFE---ET 250
Query: 123 DLTIWTSMINCYAIHGMG----NEAINLFHKMTVEERIMPDAIVYTSILLACS 171
D+ + + I G+ +E++ +F KM +E + P + + S++ +CS
Sbjct: 251 DVAVRDQVTFNVVIDGLAGFKRDESLLVFRKM-LEASLRPTDLTFVSVMGSCS 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 16/240 (6%)
Query: 1 MYAKCDNLTSARRIFDLT--AGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDG 58
MY C + A +F+ T A ++ +++ +I G A E+L +FR+M+ +RP
Sbjct: 233 MYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTD 291
Query: 59 ATLATVLSAC--ADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
T +V+ +C A +G G I+ Y L V + + MYS A +VF
Sbjct: 292 LTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTL-----VSNATMTMYSSFEDFGAAHKVF 346
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
+ + +KDL W +MI+ Y +G A++++ +M + + PD + S+L + L
Sbjct: 347 ESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI-IGVKPDEFTFGSLLA----TSLD 401
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
D L+ ++ FG++ ++ L + GQ++ A D + L +W+ ++S
Sbjct: 402 LDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIIS 460
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 23 ILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGATLATVLSACADLGSLSKGQEIE 81
+L+ + G +SG AL LF + R T +RPD +++ ++ L G ++
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGN 141
Y GL V +LL +Y + G++ ++ FD + + D+ WT++++ G
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 142 EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM------HEDFGIA 193
A +F KM ER D ++ +++ C SG E ++ F+ M H+ FG A
Sbjct: 141 YAFEVFDKMP--ER--DDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMV-RTDIRPDGA 59
MY++C + ++ +F+ + K+++SW S+I+ Y++ G A++ ++ M + PD A
Sbjct: 533 MYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAA 592
Query: 60 TLATVLSACADLGSLSKGQEI-EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAR---EV 115
T + VLSAC+ G + +G EI + +G+ + + L+ + + G + +A ++
Sbjct: 593 TFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKI 652
Query: 116 FDRVTDKDLTIWTSMINCYAIHG 138
++ + +W ++ + A HG
Sbjct: 653 SEKTIGSRVDVWWALFSACAAHG 675
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 179/292 (61%), Gaps = 3/292 (1%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAE-ALDLFRRMVRTDIRPDGATLATVLSACA 69
A IF+ T K+I+ + +M+ G+++SG A+ ++D++ M R P+ +T A+V+ AC+
Sbjct: 225 AEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACS 284
Query: 70 DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTS 129
L S GQ++ I G+ ++ +SLL MY+KCG I AR VFD++ +K++ WTS
Sbjct: 285 VLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTS 344
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
MI+ Y +G EA+ LF +M E RI P+ + + L ACSHSGLV+ G + F+SM D
Sbjct: 345 MIDGYGKNGNPEEALELFTRMK-EFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRD 403
Query: 190 FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGEL 249
+ + P ++HY C+ DL+GR G L+ A + + MP + W+ LLS+C +HGNVEL +
Sbjct: 404 YSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASI 463
Query: 250 AAAKLSDLSPGS-SGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
AA++L L+ G+Y+ ++N+Y S KW +R ++ + + K GRS
Sbjct: 464 AASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + ARR+FD KN+ SWTSMI GY ++G+P EAL+LF RM I P+ T
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 61 LATVLSACADLGSLSKGQEIEEYIYL-YGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
LSAC+ G + KG EI E + Y + + ++ + + G + KA E +
Sbjct: 377 FLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAM 436
Query: 120 TDK-DLTIWTSMINCYAIHG 138
++ D IW ++++ +HG
Sbjct: 437 PERPDSDIWAALLSSCNLHG 456
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
++ KC L+ AR++FD + ++ MI+GY + G E L L +RM + + DG T
Sbjct: 78 LHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYT 137
Query: 61 LATVLSACADLGSL-----SKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREV 115
L+ VL A GS S + + I ++LD + T+L+ Y K G ++ AR V
Sbjct: 138 LSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTV 197
Query: 116 FDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
F+ + D+++ TSMI+ Y G +A +F+ V+ D +VY +++ S SG
Sbjct: 198 FETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK-----DIVVYNAMVEGFSRSG 251
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 169/306 (55%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY + L + +N+++W ++I G AQ+G P L L++ M + RP+ T
Sbjct: 135 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 194
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
TVLS+C+DL +GQ+I G V +SL+ MYSKCG + A + F
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 254
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D+D +W+SMI+ Y HG G+EAI LF+ M + + + + + ++L ACSHSGL + GL
Sbjct: 255 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 314
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F M E +G P +KHYTC+ DLLGR G LD A I+ MP+ W LLSAC I
Sbjct: 315 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 374
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H N E+ + ++ + P S YVL+AN++ S +W++ +R + K + KE G S
Sbjct: 375 HKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGIS 434
Query: 301 QVEVKA 306
E K
Sbjct: 435 WFEHKG 440
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 114/244 (46%), Gaps = 9/244 (3%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + +L +AR++FD + + +W +MIAG Q E L LFR M PD TL
Sbjct: 35 YVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 94
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+V S A L S+S GQ+I Y YGL+LD V +SL HMY + G +Q V +
Sbjct: 95 GSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV 154
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
++L W ++I A +G + L+ M + P+ I + ++L +CS + G
Sbjct: 155 RNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG-CRPNKITFVTVLSSCSDLAIRGQG-- 211
Query: 182 FFKSMHED---FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
+ +H + G + V + L + + G L A A D WS ++SA
Sbjct: 212 --QQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAY 268
Query: 239 RIHG 242
HG
Sbjct: 269 GFHG 272
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 178/305 (58%), Gaps = 2/305 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y K ++ A+ IF +++++WT+MI GY Q G EA++LFR MV RP+ TL
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT- 120
A +LS + L SLS G++I G V +L+ MY+K G+I A FD +
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++D WTSMI A HG EA+ LF M +E + PD I Y + AC+H+GLV G
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEG-LRPDHITYVGVFSACTHAGLVNQGR 535
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++F M + I PT+ HY C+ DL GR G L A + I+ MP++ W LLSACR+
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRV 595
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H N++LG++AA +L L P +SG+Y +ANLY++ GKW+EA +R + + KE G S
Sbjct: 596 HKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
Query: 301 QVEVK 305
+EVK
Sbjct: 656 WIEVK 660
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 108/175 (61%), Gaps = 8/175 (4%)
Query: 15 FDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI-RPDGATLATVLSACADLGS 73
F+ A ++I++W SMI+G+ Q G+ ALD+F +M+R + PD TLA+VLSACA+L
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 74 LSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI--WTSMI 131
L G++I +I G D+ V +L+ MYS+CG ++ AR + ++ KDL I +T+++
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 132 NCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM 186
+ Y G N+A N+F +++++R D + +T++++ G + + F+SM
Sbjct: 355 DGYIKLGDMNQAKNIF--VSLKDR---DVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 144/337 (42%), Gaps = 63/337 (18%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+K ++ S FD ++ +SWT+MI GY G +A+ + MV+ I P TL
Sbjct: 90 YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTL 149
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT- 120
VL++ A + G+++ +I GL + V SLL+MY+KCG A+ VFDR+
Sbjct: 150 TNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209
Query: 121 ------------------------------DKDLTIWTSMINCYAIHGMGNEAINLFHKM 150
++D+ W SMI+ + G A+++F KM
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 151 TVEERIMPDAIVYTSILLACS-----------HSGLVEDGLKFFKSMHEDFGIAPTVKHY 199
+ + PD S+L AC+ HS +V G F I+ V
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTG----------FDISGIV--L 317
Query: 200 TCLADLLGRVGQLDLAVDAI-QGMPLDVQAQAWSCLLSACRIHGNVELGELAAAK--LSD 256
L + R G ++ A I Q D++ + ++ LL G ++LG++ AK
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLD-----GYIKLGDMNQAKNIFVS 372
Query: 257 LSPGSSGSYVLMANLYTSLGKWKEA-HIMRNLIDGKE 292
L ++ M Y G + EA ++ R+++ G +
Sbjct: 373 LKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ 409
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 83/144 (57%), Gaps = 11/144 (7%)
Query: 1 MYAKCDNLTSARRIFDLT-AGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MYAK N+TSA R FDL ++ +SWTSMI AQ GH EAL+LF M+ +RPD
Sbjct: 457 MYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQT-----SLLHMYSKCGSIQKARE 114
T V SAC G +++G++ + + D+D+ + T ++ ++ + G +Q+A+E
Sbjct: 517 TYVGVFSACTHAGLVNQGRQYFDMMK----DVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572
Query: 115 VFDRVT-DKDLTIWTSMINCYAIH 137
+++ + D+ W S+++ +H
Sbjct: 573 FIEKMPIEPDVVTWGSLLSACRVH 596
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 176/306 (57%), Gaps = 7/306 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGH---PAEALDLFRRMVRTDIRPD 57
YA C L AR +F+ ++ +W +++A YA S E L LF RM +RP+
Sbjct: 159 FYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPN 215
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
+L ++ +CA+LG +G Y+ L L+Q V TSL+ +YSKCG + AR+VFD
Sbjct: 216 ELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFD 275
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
++ +D++ + +MI A+HG G E I L+ K + + ++PD+ + + ACSHSGLV+
Sbjct: 276 EMSQRDVSCYNAMIRGLAVHGFGQEGIELY-KSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+GL+ F SM +GI P V+HY CL DLLGR G+L+ A + I+ MP+ A W L +
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 238 CRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKEC 297
+ HG+ E GE+A L L +SG+YVL++N+Y + +W + R L+ + K
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSP 454
Query: 298 GRSQVE 303
G S +
Sbjct: 455 GISTLN 460
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 26/202 (12%)
Query: 54 IRPDGATLATVLSACA-DLGSLSKGQEIEEYI--YLYGLDLDQQVQTSLLHMYSKCGSIQ 110
+RP+ T ++ A D G+ + ++ +L ++ D+ VQ +L+ Y+ CG ++
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLR 167
Query: 111 KAREVFDRVTDKDLTIWTSMINCYAIH---GMGNEAINLFHKMTVEERIMPDAIVYTSIL 167
+AR +F+R+ + DL W +++ YA E + LF +M V P+ + +++
Sbjct: 168 EARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR----PNELSLVALI 223
Query: 168 LACSHSGLVEDG-------LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQ 220
+C++ G G LK ++++ G T L DL + G L A
Sbjct: 224 KSCANLGEFVRGVWAHVYVLKNNLTLNQFVG--------TSLIDLYSKCGCLSFARKVFD 275
Query: 221 GMPLDVQAQAWSCLLSACRIHG 242
M ++ ++ +HG
Sbjct: 276 EMS-QRDVSCYNAMIRGLAVHG 296
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 183/306 (59%), Gaps = 5/306 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K ++SARRIFD K++++W MI YA++G E + L R+M ++P+ +T
Sbjct: 271 MYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+LS+CA + G+ + + + + LD + T+L+ MY+K G ++KA E+F+R+
Sbjct: 331 FVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK 390
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE-RIMPDAIVYTSILLACSHSGLVEDG 179
DKD+ WT+MI+ Y HG+ EA+ LF+KM E ++ P+ I + +L ACSH GLV +G
Sbjct: 391 DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEG 450
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
++ FK M E + P V+HY C+ DLLGR GQL+ A + I+ +P+ + AW LL+ACR
Sbjct: 451 IRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACR 510
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
++GN +LGE +L+++ +L+A + G E + L G+ KE G
Sbjct: 511 VYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN-PEKSLDNELNKGR---KEAGY 566
Query: 300 SQVEVK 305
S +E++
Sbjct: 567 SAIEIE 572
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 4/243 (1%)
Query: 1 MYAKCDNLTSARRIFD-LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
Y C ++ AR++FD + + +++++++ GY Q A ALDLFR M ++++ + +
Sbjct: 169 FYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVS 228
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
TL + LSA +DLG LS + GLDLD + T+L+ MY K G I AR +FD
Sbjct: 229 TLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCA 288
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
KD+ W MI+ YA G+ E + L +M E++ P++ + +L +C++S G
Sbjct: 289 IRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKY-EKMKPNSSTFVGLLSSCAYSEAAFVG 347
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ + E+ IA T L D+ +VG L+ AV+ M D ++W+ ++S
Sbjct: 348 -RTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMISGYG 405
Query: 240 IHG 242
HG
Sbjct: 406 AHG 408
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACAD 70
A IF+ + N+ + +MI GY+ S P A +F ++ + D + T L +C+
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 71 LGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK-DLTIWTS 129
+S G+ + G + ++ +L+H Y CG I AR+VFD + D +++
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIM 157
++N Y A++LF M E ++
Sbjct: 198 LMNGYLQVSKKALALDLFRIMRKSEVVV 225
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 173/302 (57%), Gaps = 1/302 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC +L AR+++D + +S +S+I+GY+Q G + LFR MV + D
Sbjct: 595 MYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFA 654
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++++L A A S G ++ YI GL + V +SLL MYSK GSI + F ++
Sbjct: 655 ISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN 714
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
DL WT++I YA HG NEA+ +++ M E+ PD + + +L ACSH GLVE+
Sbjct: 715 GPDLIAWTALIASYAQHGKANEALQVYNLMK-EKGFKPDKVTFVGVLSACSHGGLVEESY 773
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
SM +D+GI P +HY C+ D LGR G+L A I M + A W LL+AC+I
Sbjct: 774 FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKI 833
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HG VELG++AA K +L P +G+Y+ ++N+ +G+W E R L+ G + KE G S
Sbjct: 834 HGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Query: 301 QV 302
V
Sbjct: 894 SV 895
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 9/245 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y+KC +L + ++F K+ W SMI+G+ + G+ EA+ LF M+ PD +T
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
LA VL+ C+ SL +G+EI Y G+D + ++L++MYSKCGS++ AR+V+DR+
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ D +S+I+ Y+ HG+ + LF M + M D+ +SIL A + S G
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM-DSFAISSILKAAALSDESSLGA 672
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLD---LAVDAIQGMPLDVQAQAWSCLLSA 237
+ + + G+ + L + + G +D A I G L AW+ L+++
Sbjct: 673 QVHAYITK-IGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDL----IAWTALIAS 727
Query: 238 CRIHG 242
HG
Sbjct: 728 YAQHG 732
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 15/289 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC ++ A +F +++SWT M++GY +S AL++F+ M + + + T
Sbjct: 294 LYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCT 353
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +V+SAC + + ++ +++ G LD V +L+ MYSK G I + +VF+ +
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 121 D-KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSIL--LACSHSGLVE 177
D + I MI ++ +AI LF +M ++E + D S+L L C + G
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPGKAIRLFTRM-LQEGLRTDEFSVCSLLSVLDCLNLGKQV 472
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
G + D + + L L + G L+ + QG+P A W+ ++S
Sbjct: 473 HGYTLKSGLVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIPFKDNA-CWASMISG 525
Query: 238 CRIHGNV-ELGELAAAKLSD-LSPGSS--GSYVLMANLYTSLGKWKEAH 282
+G + E L + L D SP S + + + + + SL + KE H
Sbjct: 526 FNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIH 574
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 14/234 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+++K A ++F + N+ W ++IAG ++ + DLF M +PD T
Sbjct: 194 VFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++VL+ACA L L G+ ++ + G + D V T+++ +Y+KCG + +A EVF R+
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIP 312
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ + WT M++ Y A+ +F +M + + TS++ AC +V +
Sbjct: 313 NPSVVSWTVMLSGYTKSNDAFSALEIFKEMR-HSGVEINNCTVTSVISACGRPSMVCEAS 371
Query: 181 K----FFKS-MHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ 229
+ FKS + D +A L + + G +DL+ + + D+Q Q
Sbjct: 372 QVHAWVFKSGFYLDSSVAAA------LISMYSKSGDIDLSEQVFEDLD-DIQRQ 418
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 108/237 (45%), Gaps = 8/237 (3%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+ ++ A ++FD +++S MI+GY Q E+L F +M + +
Sbjct: 94 YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISY 153
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+V+SAC+ L + + + + G + V+++L+ ++SK + A +VF
Sbjct: 154 GSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLS 213
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
++ W ++I + +LFH+M V + PD+ Y+S+L AC+ + L+
Sbjct: 214 ANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ-KPDSYTYSSVLAACASL----EKLR 268
Query: 182 FFKSMHEDFGIAPTVKHYTCLA--DLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
F K + + C A DL + G + A++ +P + +W+ +LS
Sbjct: 269 FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVMLS 324
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 220 bits (561), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 186/310 (60%), Gaps = 5/310 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM---VRTDIRPD 57
+Y+ C+N T A ++FD ++ +SW + + Y ++ + L LF +M V ++PD
Sbjct: 157 LYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPD 216
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
G T L ACA+LG+L G+++ ++I GL + +L+ MYS+CGS+ KA +VF
Sbjct: 217 GVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFY 276
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+ ++++ WT++I+ A++G G EAI F++M ++ I P+ T +L ACSHSGLV
Sbjct: 277 GMRERNVVSWTALISGLAMNGFGKEAIEAFNEM-LKFGISPEEQTLTGLLSACSHSGLVA 335
Query: 178 DGLKFFKSMHE-DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
+G+ FF M +F I P + HY C+ DLLGR LD A I+ M + + W LL
Sbjct: 336 EGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLG 395
Query: 237 ACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKE 296
ACR+HG+VELGE + L +L +G YVL+ N Y+++GKW++ +R+L+ K + +
Sbjct: 396 ACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTK 455
Query: 297 CGRSQVEVKA 306
G S +E++
Sbjct: 456 PGCSAIELQG 465
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 5/233 (2%)
Query: 13 RIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP-DGATLATVLSACADL 71
R+F + +MI ++ S P E LFR + R P + + + L C
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 72 GSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMI 131
G L G +I I+ G D + T+L+ +YS C + A +VFD + +D W +
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF 186
Query: 132 NCYAIHGMGNEAINLFHKMT--VEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
+CY + + + LF KM V+ + PD + L AC++ G ++ G + + E+
Sbjct: 187 SCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN 246
Query: 190 FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
G++ + L + R G +D A GM + +W+ L+S ++G
Sbjct: 247 -GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNG 297
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 219 bits (559), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 180/304 (59%), Gaps = 2/304 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + + +A ++FD ++++SWT+MI G+ + G+ EAL FR M + ++PD +
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
L+AC +LG+LS G + Y+ + +V SL+ +Y +CG ++ AR+VF +
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+ + W S+I +A +G +E++ F KM E+ PDA+ +T L ACSH GLVE+GL+
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQ-EKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
+F+ M D+ I+P ++HY CL DL R G+L+ A+ +Q MP+ LL+AC H
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 242 G-NVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
G N+ L E L+DL+ S +YV+++N+Y + GKW+ A MR + G L K+ G S
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 301 QVEV 304
+E+
Sbjct: 449 SIEI 452
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 18 TAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADL--GSLS 75
+ + +SWTS I ++G AEA F M + P+ T +LS C D GS +
Sbjct: 31 STSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEA 90
Query: 76 KGQEIEEYIYLYGLDLDQ-QVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCY 134
G + Y GLD + V T+++ MYSK G +KAR VFD + DK+ W +MI+ Y
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGY 150
Query: 135 AIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAP 194
G + A +F KM ER D I +T+++ G E+ L +F+ M G+ P
Sbjct: 151 MRSGQVDNAAKMFDKM--PER---DLISWTAMINGFVKKGYQEEALLWFREMQIS-GVKP 204
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 34/174 (19%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y +C + AR++F + ++SW S+I G+A +G+ E+L FR+M +PD T
Sbjct: 250 LYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVT 309
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L+AC+ +G + +G Y + D ++ + H
Sbjct: 310 FTGALTACSHVGLVEEGLR-----YFQIMKCDYRISPRIEH------------------- 345
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
+ +++ Y+ G +A+ L M ++ P+ +V S+L ACS+ G
Sbjct: 346 ------YGCLVDLYSRAGRLEDALKLVQSMPMK----PNEVVIGSLLAACSNHG 389
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 178/294 (60%), Gaps = 5/294 (1%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGATLATVLSACA 69
A+++ + +N+++W MI GY ++ EAL + M+ TDI+P+ + A+ L+ACA
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 70 DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTS 129
LG L + + + G++L+ + ++L+ +Y+KCG I +REVF V D++IW +
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
MI +A HG+ EAI +F +M E + PD+I + +L CSH GL+E+G ++F M
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEH-VSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 190 FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGEL 249
F I P ++HY + DLLGR G++ A + I+ MP++ W LLS+ R + N ELGE+
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI 355
Query: 250 AAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVE 303
A + +LS SG YVL++N+Y+S KW+ A +R L+ + + K G+S +E
Sbjct: 356 A---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLE 406
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC ++ ++R +F ++ W +MI G+A G EA+ +F M + PD T
Sbjct: 209 VYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSIT 268
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLH------MYSKCGSIQKARE 114
+L+ C+ G L +G+E Y + +Q L H + + G +++A E
Sbjct: 269 FLGLLTTCSHCGLLEEGKE-----YFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYE 323
Query: 115 VFDRVT-DKDLTIWTSMIN 132
+ + + + D+ IW S+++
Sbjct: 324 LIESMPIEPDVVIWRSLLS 342
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 173/305 (56%), Gaps = 1/305 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + NL AR FD ++ +SWT MI GY ++G E+L++FR M + PD T+
Sbjct: 312 YVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+VL+ACA LGSL G+ I+ YI + D V +L+ MY KCG +KA++VF +
Sbjct: 372 VSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ 431
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+D WT+M+ A +G G EAI +F +M + I PD I Y +L AC+HSG+V+ K
Sbjct: 432 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQ-DMSIQPDDITYLGVLSACNHSGMVDQARK 490
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
FF M D I P++ HY C+ D+LGR G + A + ++ MP++ + W LL A R+H
Sbjct: 491 FFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLH 550
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
+ + ELAA K+ +L P + Y L+ N+Y +WK+ +R I + K G S
Sbjct: 551 NDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSL 610
Query: 302 VEVKA 306
+EV
Sbjct: 611 IEVNG 615
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+ C + AR +FD +++ SW MI+GY + E+++L M R + P T
Sbjct: 179 MYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVT 238
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L VLSAC+ + + + EY+ + +++ +L++ Y+ CG + A +F +
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERI------------------------ 156
+D+ WTS++ Y G A F +M V +RI
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 157 ------MPDAIVYTSILLACSHSGLVEDG 179
+PD S+L AC+H G +E G
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 18/288 (6%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
+++ A ++F +++ W +MI G+++ E + L+ M++ + PD T +L+
Sbjct: 83 HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN 142
Query: 67 ACA-DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT 125
D G+L+ G+++ ++ +GL + VQ +L+ MYS CG + AR VFDR +D+
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVF 202
Query: 126 IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKS 185
W MI+ Y E+I L +M + P ++ +L ACS V+D K
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEME-RNLVSPTSVTLLLVLSACSK---VKDK-DLCKR 257
Query: 186 MHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
+HE + P+++ L + G++D+AV + M +W+ + + G
Sbjct: 258 VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSI-----VKG 311
Query: 243 NVELGELAAAK--LSDLSPGSSGSYVLMANLYTSLGKWKEA-HIMRNL 287
VE G L A+ + S+ +M + Y G + E+ I R +
Sbjct: 312 YVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREM 359
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC A+++F ++ +WT+M+ G A +G EA+ +F +M I+PD T
Sbjct: 412 MYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLH------MYSKCGSIQKARE 114
VLSAC G + + ++ + + D +++ SL+H M + G +++A E
Sbjct: 472 YLGVLSACNHSGMVDQARK-----FFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 115 VFDRVT-DKDLTIWTSMINCYAIHG 138
+ ++ + + +W +++ +H
Sbjct: 527 ILRKMPMNPNSIVWGALLGASRLHN 551
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 185/309 (59%), Gaps = 5/309 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y + L AR++FD +++ W ++ GY + G +E L++F+ M+ I PD +
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFS 220
Query: 61 LATVLSACADLGSLSKGQEIEEYIYL-YGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ T L+ACA +G+L++G+ I E++ ++ D V T+L+ MY+KCG I+ A EVF+++
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
T +++ W ++I YA +G +A ++ E+ I PD++V +L AC+H G +E+G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
++M +GI P +HY+C+ DL+ R G+LD A+D I+ MP+ A W LL+ CR
Sbjct: 341 RTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCR 400
Query: 240 IHGNVELGELAAAKLSDLSPGS----SGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVK 295
H NVELGELA L DL G+ + V ++N+Y S+ + EA +R +I+ + + K
Sbjct: 401 THKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRK 460
Query: 296 ECGRSQVEV 304
G S +EV
Sbjct: 461 TPGWSLLEV 469
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 6/236 (2%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT---DIRPDGATLATVLSA 67
A IFD N + +MI ++S P L F MV+ DI P T ++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 68 CADLGSLSKGQEIEEYIYLYGLDL-DQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
C S G++I ++ G+ L D VQT +L +Y + + AR+VFD + D+
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 127 WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM 186
W ++N Y G+G+E + +F +M V I PD T+ L AC+ G + G + +
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLV-RGIEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 187 HEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
+ I V T L D+ + G ++ AV+ + + +W+ L+ +G
Sbjct: 245 KKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRR-NVFSWAALIGGYAAYG 299
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 176/304 (57%), Gaps = 2/304 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y NL A +F+ K+I+SWT+MI GY+Q+ EA+ +F +M+ I PD T+
Sbjct: 976 YMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTM 1035
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+TV+SACA LG L G+E+ Y G LD + ++L+ MYSKCGS+++A VF +
Sbjct: 1036 STVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK 1095
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
K+L W S+I A HG EA+ +F KM +E + P+A+ + S+ AC+H+GLV++G +
Sbjct: 1096 KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMES-VKPNAVTFVSVFTACTHAGLVDEGRR 1154
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
++SM +D+ I V+HY + L + G + A++ I M + A W LL CRIH
Sbjct: 1155 IYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIH 1214
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKEC-GRS 300
N+ + E+A KL L P +SG Y L+ ++Y +W++ +R + + K C G S
Sbjct: 1215 KNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTS 1274
Query: 301 QVEV 304
+ +
Sbjct: 1275 SIRI 1278
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 145/337 (43%), Gaps = 69/337 (20%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N+ + ++ G+ HP +L+L+ RM+R + P T ++++ A + G+ ++
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF--GESLQ 892
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCY------- 134
+I+ +G ++QT+L+ YS G I++AR+VFD + ++D WT+M++ Y
Sbjct: 893 AHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMD 952
Query: 135 ----------------------AIHGMGN--EAINLFHKMTV------------------ 152
G+GN +A +LF++M V
Sbjct: 953 SANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKR 1012
Query: 153 ------------EERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
EE I+PD + ++++ AC+H G++E G + ++ G V +
Sbjct: 1013 YREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN-GFVLDVYIGS 1071
Query: 201 CLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVE--LGELAAAKLSDLS 258
L D+ + G L+ A+ +P W+ ++ HG + L A ++ +
Sbjct: 1072 ALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVK 1130
Query: 259 PGSSGSYVLMANLYTSLGKWKEA-HIMRNLIDGKELV 294
P + ++V + T G E I R++ID +V
Sbjct: 1131 PNAV-TFVSVFTACTHAGLVDEGRRIYRSMIDDYSIV 1166
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC +L A +F KN+ W S+I G A G EAL +F +M ++P+ T
Sbjct: 1076 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 1135
Query: 61 LATVLSACADLGSLSKGQEI-EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+V +AC G + +G+ I I Y + + + ++H++SK G I +A E+ +
Sbjct: 1136 FVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM 1195
Query: 120 T-DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE 154
+ + IW ++++ IH A F+K+ V E
Sbjct: 1196 EFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLE 1231
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 184/338 (54%), Gaps = 33/338 (9%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI------ 54
MY KC +A RIFD + K +++W S++AGY ++G A + F M +I
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 55 --------------------------RPDGATLATVLSACADLGSLSKGQEIEEYIYLYG 88
DG T+ ++ SAC LG+L + I YI G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 89 LDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFH 148
+ LD ++ T+L+ M+S+CG + A +F+ +T++D++ WT+ I A+ G AI LF
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 149 KMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGR 208
M +E+ + PD + + L ACSH GLV+ G + F SM + G++P HY C+ DLLGR
Sbjct: 561 DM-IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 209 VGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLM 268
G L+ AV I+ MP++ W+ LL+ACR+ GNVE+ AA K+ L+P +GSYVL+
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 269 ANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEVKA 306
+N+Y S G+W + +R + K L K G S ++++
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 105/173 (60%), Gaps = 2/173 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGA 59
YA+C L SAR++FD + +N++SWTSMI GYA+ +A+DLF RMVR ++ P+
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T+ V+SACA L L G+++ +I G++++ + ++L+ MY KC +I A+ +FD
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
+L + +M + Y G+ EA+ +F+ M ++ + PD I S + +CS
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLM-MDSGVRPDRISMLSAISSCSQ 349
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 2/211 (0%)
Query: 6 DNLTSARRIFDLTAG-KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATV 64
++L+ A+ +F+ + + S+I GYA SG EA+ LF RM+ + I PD T
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFG 140
Query: 65 LSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL 124
LSACA + G +I I G D VQ SL+H Y++CG + AR+VFD ++++++
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 125 TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFK 184
WTSMI YA +A++LF +M +E + P+++ ++ AC+ +E G K +
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 185 SMHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
+ GI + L D+ + +D+A
Sbjct: 261 FIRNS-GIEVNDLMVSALVDMYMKCNAIDVA 290
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC+ + A+R+FD N+ +M + Y + G EAL +F M+ + +RPD +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ + +S+C+ L ++ G+ Y+ G + + +L+ MY KC A +FDR++
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K + W S++ Y +G + A F M E+ I + + +I+ L E+ +
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNI----VSWNTIISGLVQGSLFEEAI 454
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
+ F SM G+ +A G +G LDLA
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 218 bits (554), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 181/307 (58%), Gaps = 3/307 (0%)
Query: 2 YAKCDNLTSARRIFDLTA-GKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y KC + +IF A ++ ++W SMI+GY + A+ALDL M++T R D
Sbjct: 562 YGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFM 621
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
ATVLSA A + +L +G E+ L+ D V ++L+ MYSKCG + A F+ +
Sbjct: 622 YATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 681
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++ W SMI+ YA HG G EA+ LF M ++ + PD + + +L ACSH+GL+E+G
Sbjct: 682 VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF 741
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA-CR 239
K F+SM + +G+AP ++H++C+AD+LGR G+LD D I+ MP+ W +L A CR
Sbjct: 742 KHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCR 801
Query: 240 IHG-NVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
+G ELG+ AA L L P ++ +YVL+ N+Y + G+W++ R + ++ KE G
Sbjct: 802 ANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAG 861
Query: 299 RSQVEVK 305
S V +K
Sbjct: 862 YSWVTMK 868
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC ++ ARR+F K+ +SW SMI G Q+G EA++ ++ M R DI P T
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L + LS+CA L GQ+I G+DL+ V +L+ +Y++ G + + R++F +
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIV 162
+ D W S+I A ER +P+A+V
Sbjct: 478 EHDQVSWNSIIGALA----------------RSERSLPEAVV 503
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 3/173 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + + SAR++FD +N +SW +++GY+++G EAL R MV+ I +
Sbjct: 46 YLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAF 105
Query: 62 ATVLSACADLGSLS--KGQEIEEYIYLYGLDLDQQVQTSLLHMYSKC-GSIQKAREVFDR 118
+VL AC ++GS+ G++I ++ +D V L+ MY KC GS+ A F
Sbjct: 106 VSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGD 165
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
+ K+ W S+I+ Y+ G A +F M + + + + ACS
Sbjct: 166 IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 18/246 (7%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM-VRTDIRPDGAT 60
+AK +L+ AR++F+ +N ++ ++ G + EA LF M D+ P+ +
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--S 310
Query: 61 LATVLSACADLG-----SLSKGQEIEEYIYLYGL-DLDQQVQTSLLHMYSKCGSIQKARE 114
+LS+ + L KG+E+ ++ GL D + L++MY+KCGSI AR
Sbjct: 311 YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 115 VFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
VF +TDKD W SMI +G EA+ + M + I+P + S L +C+
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD-ILPGSFTLISSLSSCASLK 429
Query: 175 LVEDGLKFFKSMHED---FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAW 231
+ G + +H + GI V L L G L+ MP Q +W
Sbjct: 430 WAKLG----QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV-SW 484
Query: 232 SCLLSA 237
+ ++ A
Sbjct: 485 NSIIGA 490
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 13/196 (6%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM-VRTDIRPDGA 59
MY+KC L A R F+ +N SW SMI+GYA+ G EAL LF M + PD
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHV 722
Query: 60 TLATVLSACADLGSLSKG-QEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T VLSAC+ G L +G + E YGL + + + + + G + K + ++
Sbjct: 723 TFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEK 782
Query: 119 VTDK-DLTIWTSMIN-CYAIHG----MGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
+ K ++ IW +++ C +G +G +A + ++ E +A+ Y + +
Sbjct: 783 MPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPE-----NAVNYVLLGNMYAA 837
Query: 173 SGLVEDGLKFFKSMHE 188
G ED +K K M +
Sbjct: 838 GGRWEDLVKARKKMKD 853
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
Query: 1 MYAKC-DNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY KC ++ A F KN +SW S+I+ Y+Q+G A +F M RP
Sbjct: 148 MYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEY 207
Query: 60 TLATVLSACADLGS--LSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T ++++ L + ++I I GL D V + L+ ++K GS+ AR+VF+
Sbjct: 208 TFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFN 267
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
++ ++ ++ G EA LF M + P++ Y +L + L E
Sbjct: 268 QMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES--YVILLSSFPEYSLAE 325
Query: 178 D-GLKFFKSMH 187
+ GLK + +H
Sbjct: 326 EVGLKKGREVH 336
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 84 IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEA 143
+Y LD D + +L++ Y + G AR+VFD + ++ W +++ Y+ +G EA
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 144 INLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
+ +F + V+E I + + S+L AC G V G+ F + +H
Sbjct: 87 L-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSV--GILFGRQIH 127
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 217 bits (553), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 184/338 (54%), Gaps = 33/338 (9%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI------ 54
MY KC +A RIFD + K +++W S++AGY ++G A + F M +I
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 55 --------------------------RPDGATLATVLSACADLGSLSKGQEIEEYIYLYG 88
DG T+ ++ SAC LG+L + I YI G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 89 LDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFH 148
+ LD ++ T+L+ M+S+CG + A +F+ +T++D++ WT+ I A+ G AI LF
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 149 KMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGR 208
M +E+ + PD + + L ACSH GLV+ G + F SM + G++P HY C+ DLLGR
Sbjct: 561 DM-IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 209 VGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLM 268
G L+ AV I+ MP++ W+ LL+ACR+ GNVE+ AA K+ L+P +GSYVL+
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 269 ANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEVKA 306
+N+Y S G+W + +R + K L K G S ++++
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 105/173 (60%), Gaps = 2/173 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGA 59
YA+C L SAR++FD + +N++SWTSMI GYA+ +A+DLF RMVR ++ P+
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T+ V+SACA L L G+++ +I G++++ + ++L+ MY KC +I A+ +FD
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
+L + +M + Y G+ EA+ +F+ M ++ + PD I S + +CS
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLM-MDSGVRPDRISMLSAISSCSQ 349
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 2/211 (0%)
Query: 6 DNLTSARRIFDLTAG-KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATV 64
++L+ A+ +F+ + + S+I GYA SG EA+ LF RM+ + I PD T
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFG 140
Query: 65 LSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL 124
LSACA + G +I I G D VQ SL+H Y++CG + AR+VFD ++++++
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 125 TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFK 184
WTSMI YA +A++LF +M +E + P+++ ++ AC+ +E G K +
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 185 SMHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
+ GI + L D+ + +D+A
Sbjct: 261 FIRNS-GIEVNDLMVSALVDMYMKCNAIDVA 290
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC+ + A+R+FD N+ +M + Y + G EAL +F M+ + +RPD +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ + +S+C+ L ++ G+ Y+ G + + +L+ MY KC A +FDR++
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K + W S++ Y +G + A F M E+ I + + +I+ L E+ +
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNI----VSWNTIISGLVQGSLFEEAI 454
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
+ F SM G+ +A G +G LDLA
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 217 bits (553), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 178/306 (58%), Gaps = 4/306 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC + A IF KN++SWTS+IAG + EAL +F R ++ ++P+ T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAIT 500
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L L+ACA +G+L G+EI ++ G+ LD + +LL MY +CG + A F+
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-Q 559
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD+T W ++ Y+ G G+ + LF +M V+ R+ PD I + S+L CS S +V GL
Sbjct: 560 KKDVTSWNILLTGYSERGQGSMVVELFDRM-VKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F M ED+G+ P +KHY C+ DLLGR G+L A IQ MP+ W LL+ACRI
Sbjct: 619 MYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H ++LGEL+A + +L S G Y+L+ NLY GKW+E +R ++ L + G S
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 301 QVEVKA 306
VEVK
Sbjct: 738 WVEVKG 743
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 133/246 (54%), Gaps = 11/246 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC ++ SAR +FD ++I+SW +MI+GY ++G E L+LF M + PD T
Sbjct: 240 MYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMT 299
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +V+SAC LG G++I Y+ G +D V SL MY GS ++A ++F R+
Sbjct: 300 LTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME 359
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD+ WT+MI+ Y + + ++AI+ + +M ++ + PD I ++L AC+ G ++ G+
Sbjct: 360 RKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418
Query: 181 KFFKSMHEDFGIAPTVKHYTCLA----DLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
+ K I + Y +A ++ + +D A+D +P +W+ +++
Sbjct: 419 ELHK-----LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIA 472
Query: 237 ACRIHG 242
R++
Sbjct: 473 GLRLNN 478
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
M+ + NL A +F + +N+ SW ++ GYA+ G+ EA+ L+ RM+ ++PD
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T VL C + L++G+E+ ++ YG +LD V +L+ MY KCG ++ AR +FDR+
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
+D+ W +MI+ Y +GM +E + LF M + PD + TS++ AC
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMR-GLSVDPDLMTLTSVISAC 307
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 84/152 (55%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY + A ++F K+I+SWT+MI+GY + P +A+D +R M + ++PD T
Sbjct: 341 MYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+A VLSACA LG L G E+ + L V +L++MYSKC I KA ++F +
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTV 152
K++ WTS+I ++ EA+ +M +
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 119/307 (38%), Gaps = 54/307 (17%)
Query: 32 GYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLD- 90
G +G EA+ L M + D ++ C + QE +Y L
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLC----EWKRAQEEGSKVYSIALSS 123
Query: 91 ---LDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLF 147
L ++ + L M+ + G++ A VF ++++++L W ++ YA G +EA+ L+
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 148 HKMTVEERIMPDAIVYTSILLACS-----------HSGLVEDGLKF-------------- 182
H+M + PD + +L C H +V G +
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 183 ---FKSMHEDFGIAPTVKHYTCLADLLGRVGQ------LDLAVDAIQGMPLDVQAQAWSC 233
KS F P + A + G L+L A++G+ +D +
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFF-AMRGLSVDPDLMTLTS 302
Query: 234 LLSACRIHGNVELGE------LAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNL 287
++SAC + G+ LG + D+S +S + +Y + G W+EA + +
Sbjct: 303 VISACELLGDRRLGRDIHAYVITTGFAVDISVCNS-----LTQMYLNAGSWREAEKLFSR 357
Query: 288 IDGKELV 294
++ K++V
Sbjct: 358 MERKDIV 364
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 217 bits (552), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 176/304 (57%), Gaps = 1/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + + +IF + ++W ++I+ + G A L + +M ++++ PD AT
Sbjct: 452 MYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMAT 511
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L CA L + G+EI + +G + + Q+ +L+ MYSKCG ++ + VF+R++
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS 571
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D+ WT MI Y ++G G +A+ F M + I+PD++V+ +I+ ACSHSGLV++GL
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKALETFADME-KSGIVPDSVVFIAIIYACSHSGLVDEGL 630
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
F+ M + I P ++HY C+ DLL R ++ A + IQ MP+ A W+ +L ACR
Sbjct: 631 ACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRT 690
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
G++E E + ++ +L+P G +L +N Y +L KW + ++R + K + K G S
Sbjct: 691 SGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYS 750
Query: 301 QVEV 304
+EV
Sbjct: 751 WIEV 754
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 98/173 (56%), Gaps = 4/173 (2%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
+L+ RR+ + KN+ W S+I ++++G EAL+ + ++ + + PD T +V+
Sbjct: 58 SLSVFRRV---SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIK 114
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
ACA L G + E I G + D V +L+ MYS+ G + +AR+VFD + +DL
Sbjct: 115 ACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS 174
Query: 127 WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
W S+I+ Y+ HG EA+ ++H++ I+PD+ +S+L A + +V+ G
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 10/250 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K T ARR+FD ++ +S+ +MI GY + E++ +F + +PD T
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLT 309
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+++VL AC L LS + I Y+ G L+ V+ L+ +Y+KCG + AR+VF+ +
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD W S+I+ Y G EA+ LF M + E D I Y L+ S S + D L
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITY---LMLISVSTRLAD-L 424
Query: 181 KFFKSMHED---FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
KF K +H + GI + L D+ + G++ ++ M W+ ++SA
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISA 483
Query: 238 CRIHGNVELG 247
C G+ G
Sbjct: 484 CVRFGDFATG 493
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 11/253 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY++ LT AR++FD ++++SW S+I+GY+ G+ EAL+++ + + I PD T
Sbjct: 150 MYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFT 209
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+++VL A +L + +GQ + + G++ V L+ MY K AR VFD +
Sbjct: 210 VSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD 269
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D + +MI Y M E++ +F + ++ PD + +S+L AC H +
Sbjct: 270 VRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAK 327
Query: 181 KFFKSM-HEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ M F + TV++ L D+ + G + A D M +W+ ++S
Sbjct: 328 YIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIIS--- 381
Query: 240 IHGNVELGELAAA 252
G ++ G+L A
Sbjct: 382 --GYIQSGDLMEA 392
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 14/277 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC ++ +AR +F+ K+ +SW S+I+GY QSG EA+ LF+ M+ + + D T
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++S L L G+ + G+ +D V +L+ MY+KCG + + ++F +
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 470
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D W ++I+ G + + +M E ++PD + L C+ G
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE-VVPDMATFLVTLPMCASLAAKRLG- 528
Query: 181 KFFKSMH---EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
K +H FG ++ L ++ + G L+ + + M W+ ++ A
Sbjct: 529 ---KEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR-DVVTWTGMIYA 584
Query: 238 CRIHGNVELGELAAAKLSDLSPGS--SGSYVLMANLY 272
++G GE A +D+ S V +A +Y
Sbjct: 585 YGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIY 618
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 217 bits (552), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 165/283 (58%), Gaps = 2/283 (0%)
Query: 24 LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEY 83
+SW S+I+GY +A LF RM+ I PD T ATVL CA+L S G++I
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ 628
Query: 84 IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEA 143
+ L D + ++L+ MYSKCG + +R +F++ +D W +MI YA HG G EA
Sbjct: 629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 144 INLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLA 203
I LF +M +E I P+ + + SIL AC+H GL++ GL++F M D+G+ P + HY+ +
Sbjct: 689 IQLFERMILEN-IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 747
Query: 204 DLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH-GNVELGELAAAKLSDLSPGSS 262
D+LG+ G++ A++ I+ MP + W LL C IH NVE+ E A A L L P S
Sbjct: 748 DILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDS 807
Query: 263 GSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEVK 305
+Y L++N+Y G W++ +R + G +L KE G S VE+K
Sbjct: 808 SAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELK 850
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKCDN+ A+ +FD + N S+ +MI GY+Q H +AL LF R++ + + D +
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L+ V ACA + LS+G +I L LD V + + MY KC ++ +A VFD +
Sbjct: 385 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR 444
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS--------- 171
+D W ++I + +G G E + LF M + RI PD + SIL AC+
Sbjct: 445 RRDAVSWNAIIAAHEQNGKGYETLFLFVSM-LRSRIEPDEFTFGSILKACTGGSLGYGME 503
Query: 172 -HSGLVEDGL 180
HS +V+ G+
Sbjct: 504 IHSSIVKSGM 513
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 22/192 (11%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC L A R+FD ++ +SW ++IA + Q+G E L LF M+R+ I PD T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++L AC GSL G EI I G+ + V SL+ MYSKCG I++A ++ R
Sbjct: 486 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544
Query: 121 DK-------------------DLTI-WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDA 160
+ ++ + W S+I+ Y + +A LF +M +E I PD
Sbjct: 545 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM-MEMGITPDK 603
Query: 161 IVYTSILLACSH 172
Y ++L C++
Sbjct: 604 FTYATVLDTCAN 615
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC +L +R +F+ + ++ ++W +MI GYA G EA+ LF RM+ +I+P+ T
Sbjct: 647 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVT 706
Query: 61 LATVLSACADLGSLSKGQEIEEYIYL----YGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
++L ACA +G + KG EY Y+ YGLD ++++ + K G +++A E+
Sbjct: 707 FISILRACAHMGLIDKGL---EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELI 763
Query: 117 DRVT-DKDLTIWTSMINCYAIH 137
+ + D IW +++ IH
Sbjct: 764 REMPFEADDVIWRTLLGVCTIH 785
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+K +++ A F++ ++++SW SM++GY Q+G +++++F M R I DG T
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
A +L C+ L S G +I + G D D ++LL MY+K ++ VF + +
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
K+ W+++I + + + A+ F +M + +I Y S+L +C+
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCA 292
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 11/246 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK + R+F KN +SW+++IAG Q+ + AL F+ M + + +
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A+VL +CA L L G ++ + D V+T+ L MY+KC ++Q A+ +FD
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ + + +MI Y+ G +A+ LFH++ + + D I + + AC+ + +GL
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRL-MSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 181 KFFKSMHEDFGIAPTVKHYTCLA----DLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
+ + I ++ C+A D+ G+ L A M A +W+ +++
Sbjct: 403 QIY-----GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR-DAVSWNAIIA 456
Query: 237 ACRIHG 242
A +G
Sbjct: 457 AHEQNG 462
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 180/284 (63%), Gaps = 1/284 (0%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N+++WTS+I G G ++L+ FR+M + + + T+ +LS CA+L +L+ G+EI
Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIH 457
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGN 141
++ + + VQ +L++MY+KCG + + VF+ + DKDL W S+I Y +HG
Sbjct: 458 GHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAE 517
Query: 142 EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTC 201
+A+++F +M + PD I ++L ACSH+GLVE G + F SM + FG+ P +HY C
Sbjct: 518 KALSMFDRM-ISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYAC 576
Query: 202 LADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGS 261
+ DLLGRVG L A + ++ MP++ + LL++CR+H NV++ E A++LS L P
Sbjct: 577 IVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPER 636
Query: 262 SGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEVK 305
+GSY+L++N+Y++ G+W+E+ +R L K+L K G S +EVK
Sbjct: 637 TGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVK 680
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 112/255 (43%), Gaps = 43/255 (16%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD--- 57
+Y K + A +F +N +SW MI G++Q A+ +F M R + +PD
Sbjct: 202 LYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVT 261
Query: 58 --------------------------------GATLATVLSACADLGSLSKGQEIEEYIY 85
G LA S CA+L +LS +++ Y+
Sbjct: 262 WTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVI 321
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAIN 145
G + + +L+H+Y K G ++ A +F ++ +K + W S+I + G +EA++
Sbjct: 322 KGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALS 381
Query: 146 LFHKMTVEE-----RIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
LF ++ EE + + + +TS++ C+ G +D L++F+ M +A +V
Sbjct: 382 LFSEL--EEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVT-IC 438
Query: 201 CLADLLGRVGQLDLA 215
C+ + + L+L
Sbjct: 439 CILSICAELPALNLG 453
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC L+ +F+ K+++SW S+I GY G +AL +F RM+ + PDG
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIA 537
Query: 61 LATVLSACADLGSLSKGQEIEEYI-YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
L VLSAC+ G + KG+EI + +GL+ Q+ ++ + + G +++A E+ +
Sbjct: 538 LVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Query: 120 T-DKDLTIWTSMINCYAIH 137
+ + + +++N +H
Sbjct: 598 PMEPKVCVLGALLNSCRMH 616
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 4/189 (2%)
Query: 1 MYAKCDNLTSARRIFD---LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
+YA+ L AR +F+ L ++ W S++ G AL+L+R M + + D
Sbjct: 98 VYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGD 157
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
G L +L AC LG + + GL + V LL +Y K G + A +F
Sbjct: 158 GYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFV 217
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+ ++ W MI ++ A+ +F M EE PD + +TS+L S G E
Sbjct: 218 EMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREE-FKPDEVTWTSVLSCHSQCGKFE 276
Query: 178 DGLKFFKSM 186
D LK+F M
Sbjct: 277 DVLKYFHLM 285
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 177/305 (58%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+ C NL SA +F ++I+SW+++I GY Q+G E F M ++ +P
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
LA++LS ++ + G+++ +GL+ + V++SL++MYSKCGSI++A +F
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D+ T+MIN YA HG EAI+LF K +++ PD++ + S+L AC+HSG ++ G
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEAIDLFEK-SLKVGFRPDSVTFISVLTACTHSGQLDLGF 532
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F M E + + P +HY C+ DLL R G+L A I M W+ LL AC+
Sbjct: 533 HYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKA 592
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
G++E G AA ++ +L P + + V +AN+Y+S G +EA +R + K ++KE G S
Sbjct: 593 KGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWS 652
Query: 301 QVEVK 305
+++K
Sbjct: 653 SIKIK 657
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY +C + +F+ + ++++SWTS+I Y + G +A++ F +M + + P+ T
Sbjct: 253 MYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQT 312
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A++ SACA L L G+++ + GL+ V S++ MYS CG++ A +F +
Sbjct: 313 FASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMR 372
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+D+ W+++I Y G G E F M + P S+L + ++E G
Sbjct: 373 CRDIISWSTIIGGYCQAGFGEEGFKYFSWMR-QSGTKPTDFALASLLSVSGNMAVIEGG 430
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY + + + R+F +N ++WT++I G +G E L F M R++ D T
Sbjct: 152 MYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYT 211
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A L ACA L + G+ I ++ + G V SL MY++CG +Q +F+ ++
Sbjct: 212 FAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS 271
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
++D+ WTS+I Y G +A+ F KM ++ P+ + S+ AC+
Sbjct: 272 ERDVVSWTSLIVAYKRIGQEVKAVETFIKMR-NSQVPPNEQTFASMFSACA 321
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 14/282 (4%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFR--RMVRTDIRPDGATLATV 64
NL +AR++FD +I+SWTS+I Y + + EAL LF R+V + PD + L+ V
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 65 LSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL 124
L AC +++ G+ + Y L V +SLL MY + G I K+ VF + ++
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 125 TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFK 184
WT++I G E + F +M+ E + D + L AC +GL + +K+ K
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEE-LSDTYTFAIALKAC--AGLRQ--VKYGK 229
Query: 185 SMHEDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC-RI 240
++H G T+ LA + G++ + + M + +W+ L+ A RI
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRI 288
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGK--WKE 280
V+ E + P + ++ M + SL + W E
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGE 330
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 107 GSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKM-TVEERIMPDAIVYTS 165
G+++ AR+VFD++ D+ WTS+I Y +EA+ LF M V+ + PD V +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 166 ILLACSHSGLVEDGLKFFKSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
+L AC S + G +S+H + +V + L D+ RVG++D + M
Sbjct: 114 VLKACGQSSNIAYG----ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 223 PLDVQAQAWSCLLS 236
P A W+ +++
Sbjct: 170 PFR-NAVTWTAIIT 182
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 178/291 (61%), Gaps = 8/291 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI-RPDGAT 60
YA + A+ +FD ++++SW +M+ YA G E L++F +M+ +PDG T
Sbjct: 247 YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFT 306
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +VLSACA LGSLS+G+ + YI +G++++ + T+L+ MYSKCG I KA EVF +
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS 366
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D++ W S+I+ ++HG+G +A+ +F +M V E P+ I + +L AC+H G+++
Sbjct: 367 KRDVSTWNSIISDLSVHGLGKDALEIFSEM-VYEGFKPNGITFIGVLSACNHVGMLDQAR 425
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K F+ M + + PT++HY C+ DLLGR+G+++ A + + +P D + LL AC+
Sbjct: 426 KLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKR 485
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGK 291
G +E E A +L +L+ S Y M+NLY S G+W++ +IDG+
Sbjct: 486 FGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEK------VIDGR 530
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 18/247 (7%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
++ A I + N + S+I YA S P AL +FR M+ + PD + VL A
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
CA +G++I GL D V+ +L+++Y + G + AR+V DR+ +D W
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSW 209
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
S+++ Y G+ +EA LF +M EER + + ++ + +GLV++ + F SM
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEM--EERNVES---WNFMISGYAAAGLVKEAKEVFDSMP 264
Query: 188 -EDF----GIAPTVKHYTCLADLLGRVGQ-LDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
D + H C ++L + LD + + G L +LSAC
Sbjct: 265 VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTL-------VSVLSACASL 317
Query: 242 GNVELGE 248
G++ GE
Sbjct: 318 GSLSQGE 324
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC + A +F T+ +++ +W S+I+ + G +AL++F MV +P+G T
Sbjct: 348 MYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGIT 407
Query: 61 LATVLSACADLGSLSKGQEIEEYI-YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
VLSAC +G L + +++ E + +Y ++ + ++ + + G I++A E+ + +
Sbjct: 408 FIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
Query: 120 TDKDLTI 126
+ +I
Sbjct: 468 PADEASI 474
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 183/307 (59%), Gaps = 2/307 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMV-RTDIRPDGA 59
MY +C + + +F+ K SW+SM++ A G +E L LFR M T+++ + +
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ + L ACA+ G+L+ G I ++ +L+ VQTSL+ MY KCG + KA +F ++
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 295
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++ +++MI+ A+HG G A+ +F KM ++E + PD +VY S+L ACSHSGLV++G
Sbjct: 296 EKRNNLTYSAMISGLALHGEGESALRMFSKM-IKEGLEPDHVVYVSVLNACSHSGLVKEG 354
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ F M ++ + PT +HY CL DLLGR G L+ A++ IQ +P++ W LS CR
Sbjct: 355 RRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCR 414
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+ N+ELG++AA +L LS + G Y+L++NLY+ W + R I K L + G
Sbjct: 415 VRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGF 474
Query: 300 SQVEVKA 306
S VE+K
Sbjct: 475 SIVELKG 481
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 8/249 (3%)
Query: 3 AKC------DNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP 56
AKC +++ A IF + +MI GY EAL + M++ P
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEP 130
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
D T +L AC L S+ +G++I ++ GL+ D VQ SL++MY +CG ++ + VF
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVF 190
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
+++ K W+SM++ A GM +E + LF M E + + S LLAC+++G +
Sbjct: 191 EKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGAL 250
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
G+ + + + T L D+ + G LD A+ Q M +S ++S
Sbjct: 251 NLGMSIHGFLLRNISELNIIVQ-TSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMIS 308
Query: 237 ACRIHGNVE 245
+HG E
Sbjct: 309 GLALHGEGE 317
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 180/306 (58%), Gaps = 5/306 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGAT 60
YAK ++ SAR +FD + +++++W+SMI GY + G +AL++F +M+R + + T
Sbjct: 184 YAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVT 243
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR-- 118
+ +V+ ACA LG+L++G+ + YI L L +QTSL+ MY+KCGSI A VF R
Sbjct: 244 MVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRAS 303
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
V + D +W ++I A HG E++ LFHKM E +I PD I + +L ACSH GLV++
Sbjct: 304 VKETDALMWNAIIGGLASHGFIRESLQLFHKMR-ESKIDPDEITFLCLLAACSHGGLVKE 362
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
FFKS+ E G P +HY C+ D+L R G + A D I MP+ LL+ C
Sbjct: 363 AWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGC 421
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
HGN+EL E KL +L P + G YV +AN+Y +++ A MR ++ K + K G
Sbjct: 422 INHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAG 481
Query: 299 RSQVEV 304
S +++
Sbjct: 482 HSILDL 487
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 111/255 (43%), Gaps = 39/255 (15%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
W +I G++ S +P +++ ++ +M+R + PD T ++ + + L + G + +
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 86 LYGLDLDQQVQTSLLHMY-------------------------------SKCGSIQKARE 114
GL+ D + +L+HMY +K G + AR
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 115 VFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
VFD ++++D+ W+SMI+ Y G N+A+ +F +M + + S++ AC+H G
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 175 LVEDGLKFFKSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPL-DVQAQA 230
+ G K++H D + TV T L D+ + G + A + + A
Sbjct: 256 ALNRG----KTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 231 WSCLLSACRIHGNVE 245
W+ ++ HG +
Sbjct: 312 WNAIIGGLASHGFIR 326
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 172/296 (58%), Gaps = 1/296 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YA + + F T+ ++I SWTSMI + Q+ A DLFR++ + IRP+ T
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++ ++SACAD +LS G++I+ Y G+D V+TS + MY+K G++ A +VF V
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ D+ +++MI+ A HG NEA+N+F M I P+ + +L+AC H GLV GL
Sbjct: 522 NPDVATYSAMISSLAQHGSANEALNIFESMKTH-GIKPNQQAFLGVLIACCHGGLVTQGL 580
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K+F+ M D+ I P KH+TCL DLLGR G+L A + I W LLS+CR+
Sbjct: 581 KYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRV 640
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKE 296
+ + +G+ A +L +L P +SGSYVL+ N+Y G A +R L+ + + KE
Sbjct: 641 YKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKE 696
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 9/228 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC L AR++FD +NI+S+ S+I+GY Q G +A++LF +++ D T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A L C + L G+ + + + GL + L+ MYSKCG + +A +FDR
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYT--SILLACS---HSGL 175
++D W S+I+ Y G E +NL KM R + Y S+L AC + G
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKM---HRDGLNLTTYALGSVLKACCINLNEGF 267
Query: 176 VEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMP 223
+E G+ G+ + T L D+ + G L A+ MP
Sbjct: 268 IEKGMA-IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP 314
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 6/184 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGH-----PAEALDLFRRMVRTDIR 55
MYAK +L A ++F L KN++++ +MI+G+ Q +EA LF M R +
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Query: 56 PDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREV 115
P +T + VL AC+ +L G++I I D+ + ++L+ +Y+ GS + +
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 116 FDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGL 175
F + +D+ WTSMI+C+ + A +LF ++ I P+ + ++ AC+
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL-FSSHIRPEEYTVSLMMSACADFAA 474
Query: 176 VEDG 179
+ G
Sbjct: 475 LSSG 478
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 11/188 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC L A +FD ++ +SW S+I+GY + G E L+L +M R +
Sbjct: 192 MYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYA 251
Query: 61 LATVLSACA---DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
L +VL AC + G + KG I Y G++ D V+T+LL MY+K GS+++A ++F
Sbjct: 252 LGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFS 311
Query: 118 RVTDKDLTIWTSMINCY-----AIHGMGNEAINLFHKMTVEER-IMPDAIVYTSILLACS 171
+ K++ + +MI+ + +EA LF M ++ R + P ++ +L ACS
Sbjct: 312 LMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF--MDMQRRGLEPSPSTFSVVLKACS 369
Query: 172 HSGLVEDG 179
+ +E G
Sbjct: 370 AAKTLEYG 377
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 215 bits (547), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 184/309 (59%), Gaps = 5/309 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y + L AR++FD +++ W ++ GY + G +E L++FR M+ + PD +
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYG-LDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ T L+ACA +G+L++G+ I E++ ++ D V T+L+ MY+KCG I+ A EVF ++
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
T +++ W ++I YA +G +A+ ++ E+ I PD++V +L AC+H G +E+G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
++M + I P +HY+C+ DL+ R G+LD A++ I+ MP+ A W LL+ CR
Sbjct: 341 RSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 400
Query: 240 IHGNVELGELAAAKLSDLSPGS----SGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVK 295
H NVELGELA L DL G+ + V ++N+Y S+ + EA +R +I+ + + K
Sbjct: 401 THKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRK 460
Query: 296 ECGRSQVEV 304
G S +EV
Sbjct: 461 TPGWSVLEV 469
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 6/236 (2%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT---DIRPDGATLATVLSA 67
A IFD N + +MI ++S P L F MV+ DI P T ++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 68 CADLGSLSKGQEIEEYIYLYGLDL-DQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
C S G++I ++ G+ L D VQT +L +Y + + AR+VFD + D+
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 127 WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM 186
W ++N Y G+G+E + +F +M V + + PD T+ L AC+ G + G + +
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLV-KGLEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 187 HEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
+ I V T L D+ + G ++ AV+ + + +W+ L+ +G
Sbjct: 245 KKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRR-NVFSWAALIGGYAAYG 299
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 214 bits (546), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 183/304 (60%), Gaps = 4/304 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD--IRPDGA 59
Y K ++ SA +F L + K+ L + +MIA Y Q+G P +AL LF +M+ + I+PD
Sbjct: 273 YTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEI 332
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
TL++V+SA + LG+ S G +E YI +G+ +D + TSL+ +Y K G KA ++F +
Sbjct: 333 TLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNL 392
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
KD +++MI I+GM EA +LF M +E++I P+ + +T +L A SHSGLV++G
Sbjct: 393 NKKDTVSYSAMIMGCGINGMATEANSLFTAM-IEKKIPPNVVTFTGLLSAYSHSGLVQEG 451
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
K F SM +D + P+ HY + D+LGR G+L+ A + I+ MP+ A W LL A
Sbjct: 452 YKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASG 510
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+H NVE GE+A + L +G +A +Y+S+G+W +A +R+ I K+L K G
Sbjct: 511 LHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGC 570
Query: 300 SQVE 303
S VE
Sbjct: 571 SWVE 574
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 123/279 (44%), Gaps = 24/279 (8%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
+T +RI G + SW ++ +Q E +D++ M + I P + +VL A
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
C + ++ G+ I GL VQT L+ +YS+ G I+ A++ FD + +K+ W
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
S+++ Y G +EA +F K + E+ DA+ + I+ + + G + + F +M
Sbjct: 174 NSLLHGYLESGELDEARRVFDK--IPEK---DAVSWNLIISSYAKKGDMGNACSLFSAM- 227
Query: 188 EDFGIAPTVKHYTCLADLLG---RVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNV 244
+K L+G ++ LA MP +W ++S G
Sbjct: 228 -------PLKSPASWNILIGGYVNCREMKLARTYFDAMP-QKNGVSWITMIS-----GYT 274
Query: 245 ELGELAAAK--LSDLSPGSSGSYVLMANLYTSLGKWKEA 281
+LG++ +A+ +S Y M YT GK K+A
Sbjct: 275 KLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDA 313
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 27/307 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI------ 54
+Y++ + A++ FD A KN +SW S++ GY +SG EA +F ++ D
Sbjct: 148 LYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLI 207
Query: 55 ------RPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDL--------DQQVQTSLL 100
+ D ++ SA S I Y+ + L Q+ S +
Sbjct: 208 ISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWI 267
Query: 101 HM---YSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEER-I 156
M Y+K G +Q A E+F ++ KD ++ +MI CY +G +A+ LF +M I
Sbjct: 268 TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYI 327
Query: 157 MPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAV 216
PD I +S++ A S G G + +S + GI T L DL + G A
Sbjct: 328 QPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAF 386
Query: 217 DAIQGMPLDVQAQAWSCLLSACRIHG-NVELGELAAAKLSDLSPGSSGSYVLMANLYTSL 275
+ ++S ++ C I+G E L A + P + ++ + + Y+
Sbjct: 387 KMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHS 445
Query: 276 GKWKEAH 282
G +E +
Sbjct: 446 GLVQEGY 452
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 183/311 (58%), Gaps = 7/311 (2%)
Query: 1 MYAKCDNLTSARRIFD--LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM--VRTDIRP 56
MY KC+++ +ARR+FD + G+N++SWTSMI YAQ+ EA++LFR T R
Sbjct: 175 MYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRA 234
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
+ LA+V+SAC+ LG L G+ + G + + V TSLL MY+KCGS+ A ++F
Sbjct: 235 NQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIF 294
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
R+ + +TSMI A HG+G A+ LF +M V RI P+ + +L ACSHSGLV
Sbjct: 295 LRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM-VAGRINPNYVTLLGVLHACSHSGLV 353
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQA--WSCL 234
+GL++ M E +G+ P +HYTC+ D+LGR G++D A + + + + + A W L
Sbjct: 354 NEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGAL 413
Query: 235 LSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELV 294
LSA R+HG VE+ A+ +L + + +Y+ ++N Y G W+++ +R + V
Sbjct: 414 LSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNV 473
Query: 295 KECGRSQVEVK 305
KE S +E K
Sbjct: 474 KERACSWIENK 484
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 131/264 (49%), Gaps = 20/264 (7%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGAT 60
Y K + +AR++FD N++SWTS+I+GY G P AL +F++M + P+ T
Sbjct: 74 YVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYT 133
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A+V AC+ L G+ I + + GL + V +SL+ MY KC ++ AR VFD +
Sbjct: 134 FASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMI 193
Query: 121 --DKDLTIWTSMINCYAIHGMGNEAINLFHKMT---VEERIMPDAIVYTSILLACSHSGL 175
+++ WTSMI YA + G+EAI LF +R + + S++ ACS G
Sbjct: 194 GYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDR--ANQFMLASVISACSSLGR 251
Query: 176 VEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ---AWS 232
++ G K + G T L D+ + G L A + + L ++ +++
Sbjct: 252 LQWG-KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA----EKIFLRIRCHSVISYT 306
Query: 233 CLLSACRIHGNVELGELAAAKLSD 256
++ A HG LGE AA KL D
Sbjct: 307 SMIMAKAKHG---LGE-AAVKLFD 326
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 17/228 (7%)
Query: 29 MIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYG 88
M G+ Q+ H A A LF + D T A ++ ++ + + + G
Sbjct: 1 MKKGFIQNVHLAPATSLFVPQYKNDF-FHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLG 59
Query: 89 LDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFH 148
D L+ Y K I AR++FD + + ++ WTS+I+ Y G A+++F
Sbjct: 60 FASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQ 119
Query: 149 KMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH---EDFGIAPTVKHYTCLADL 205
KM + + P+ + S+ AC S L E + K++H E G+ + + L D+
Sbjct: 120 KMHEDRPVPPNEYTFASVFKAC--SALAES--RIGKNIHARLEISGLRRNIVVSSSLVDM 175
Query: 206 LGRVGQLDLA---VDAIQGMPLDVQAQAWSCLLSA----CRIHGNVEL 246
G+ ++ A D++ G +V +W+ +++A R H +EL
Sbjct: 176 YGKCNDVETARRVFDSMIGYGRNV--VSWTSMITAYAQNARGHEAIEL 221
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 214 bits (544), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 174/305 (57%), Gaps = 3/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
YAK +L A R F K+++S+ S+I G + P E+ LF M + IRPD T
Sbjct: 352 FYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITT 411
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L VL+AC+ L +L G Y ++G ++ + +L+ MY+KCG + A+ VFD +
Sbjct: 412 LLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH 471
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D+ W +M+ + IHG+G EA++LF+ M E + PD + +IL ACSHSGLV++G
Sbjct: 472 KRDIVSWNTMLFGFGIHGLGKEALSLFNSMQ-ETGVNPDEVTLLAILSACSHSGLVDEGK 530
Query: 181 KFFKSMHE-DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ F SM DF + P + HY C+ DLL R G LD A D + MP + + LLSAC
Sbjct: 531 QLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACW 590
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+ N ELG + K+ L ++ S VL++N Y++ +W++A +R + + L+K G
Sbjct: 591 TYKNAELGNEVSKKMQSLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGY 649
Query: 300 SQVEV 304
S V+V
Sbjct: 650 SWVDV 654
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNI--LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDG 58
+YA C+ + AR +FD I ++W MI YA + +ALDL+ +M+ + +RP
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTK 103
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T VL ACA L ++ G+ I ++ D V T+L+ Y+KCG ++ A +VFD
Sbjct: 104 YTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE 163
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ +D+ W +MI+ +++H + I LF M + + P+ + A +G + +
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 179 G 179
G
Sbjct: 224 G 224
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 13/248 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD----IRP 56
+YAK + ARR+FDL KN ++W++MI GY ++ EA ++F +M+ D + P
Sbjct: 249 VYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP 308
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
+ +L CA G LS G+ + Y G LD VQ +++ Y+K GS+ A F
Sbjct: 309 --VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQF 366
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
+ KD+ + S+I ++ E+ LFH+M I PD +L ACSH +
Sbjct: 367 SEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG-IRPDITTLLGVLTACSHLAAL 425
Query: 177 EDG--LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCL 234
G + +H G A L D+ + G+LD+A M +W+ +
Sbjct: 426 GHGSSCHGYCVVH---GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTM 481
Query: 235 LSACRIHG 242
L IHG
Sbjct: 482 LFGFGIHG 489
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 2/181 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
YAKC L A ++FD +++++W +MI+G++ + + LF M R D + P+ +
Sbjct: 147 FYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLS 206
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T+ + A G+L +G+ + Y G D V+T +L +Y+K I AR VFD
Sbjct: 207 TIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLD 266
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERI-MPDAIVYTSILLACSHSGLVED 178
K+ W++MI Y + M EA +F +M V + + M + IL+ C+ G +
Sbjct: 267 FKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSG 326
Query: 179 G 179
G
Sbjct: 327 G 327
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 214 bits (544), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 176/318 (55%), Gaps = 34/318 (10%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLF-------------- 46
MY KC +++ AR++FD +N + W +MI+ Y G EA++L+
Sbjct: 92 MYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNA 151
Query: 47 -------------------RRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLY 87
R+M+ +P+ TL ++SAC+ +G+ +EI Y +
Sbjct: 152 IIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRN 211
Query: 88 GLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLF 147
++ Q+++ L+ Y +CGSI + VFD + D+D+ W+S+I+ YA+HG A+ F
Sbjct: 212 LIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTF 271
Query: 148 HKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLG 207
+M + ++ PD I + ++L ACSH+GL ++ L +FK M D+G+ + HY+CL D+L
Sbjct: 272 QEMELA-KVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLS 330
Query: 208 RVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVL 267
RVG+ + A IQ MP A+ W LL ACR +G +EL E+AA +L + P + +YVL
Sbjct: 331 RVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVL 390
Query: 268 MANLYTSLGKWKEAHIMR 285
+ +Y S+G+ +EA +R
Sbjct: 391 LGKIYMSVGRQEEAERLR 408
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 117/279 (41%), Gaps = 49/279 (17%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP-DGATLATVLSACADLGSLSKGQEI 80
++S T ++ YA G+ +AL+LF +M + P D + L +CA G +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 81 EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMG 140
+ + V +LL MY KC S+ AR++FD + ++ +W +MI+ Y G
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 141 NEAINL--------------------------------FHKMTVEERIMPDAIVYTSILL 168
EA+ L F++ +E R P+ I +++
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 169 ACSHSGLVEDGLKFFKSMHE-DFG--IAPTVKHYTCLADLLGRVGQL---DLAVDAIQGM 222
ACS G + K +H F I P + + L + GR G + L D+++
Sbjct: 191 ACSAIG----AFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME-- 244
Query: 223 PLDVQAQAWSCLLSACRIHGNVE--LGELAAAKLSDLSP 259
D AWS L+SA +HG+ E L +L+ ++P
Sbjct: 245 --DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTP 281
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 175/294 (59%), Gaps = 4/294 (1%)
Query: 14 IFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGATLATVLSACADLG 72
+FD KN++SWT+MI GY ++ EAL++F +M+R ++P+ T ++LSAC+DL
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 73 SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR--VTDKDLTIWTSM 130
L +GQ+I + I ++ V ++LL+MYSK G + AR++FD V +DL W SM
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSM 405
Query: 131 INCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDF 190
I YA HG G EAI ++++M + P A+ Y ++L ACSH+GLVE G++FFK + D
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMR-KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDE 464
Query: 191 GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELA 250
+ +HYTCL DL GR G+L + I + + +LSAC +H V + +
Sbjct: 465 SLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEV 524
Query: 251 AAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEV 304
K+ + +G+YVLM+N+Y + GK +EA MR + K L K+ G S V+V
Sbjct: 525 VKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKV 578
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 24/200 (12%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP----- 56
YA+ + A +FD +NI+SW SM+ Q G EA++LF RM R D+
Sbjct: 150 YAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMV 209
Query: 57 ----------------DGATLATVLSACADLGSLSKGQEIEEYIYLYGL--DLDQQVQTS 98
D ++S A + ++ I+E L+ + + D +
Sbjct: 210 DGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNT 269
Query: 99 LLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMP 158
++ + + + KA +FDR+ +K++ WT+MI Y + EA+N+F KM + + P
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKP 329
Query: 159 DAIVYTSILLACSH-SGLVE 177
+ Y SIL ACS +GLVE
Sbjct: 330 NVGTYVSILSACSDLAGLVE 349
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 112/234 (47%), Gaps = 18/234 (7%)
Query: 4 KCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLAT 63
K + AR++FD +++++WT +I GY + G EA +LF R+ D R + T
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTA 114
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKD 123
++S LS I E ++ + + +++ Y++ G I KA E+FD + +++
Sbjct: 115 MVSGYLRSKQLS----IAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 124 LTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFF 183
+ W SM+ G +EA+NLF +M D + +T+++ + +G V++ + F
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMPRR-----DVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 184 KSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
M E I+ + + + ++D A Q MP + +W+ +++
Sbjct: 226 DCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMITG 273
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 18/136 (13%)
Query: 1 MYAKCDNLTSARRIFD--LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDG 58
MY+K L +AR++FD L ++++SW SMIA YA GH EA++++ +M + +P
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
Query: 59 ATLATVLSACADLGSLSKGQE-IEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T +L AC+ G + KG E ++ + L L ++ T L+ + CG + ++V
Sbjct: 435 VTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDL---CGRAGRLKDV-- 489
Query: 118 RVTDKDLTIWTSMINC 133
T+ INC
Sbjct: 490 ----------TNFINC 495
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 174/288 (60%), Gaps = 5/288 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGAT 60
+ K + AR +FD T K+I SW +MI+GYAQS P AL LFR M+ + ++PD T
Sbjct: 381 FVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAIT 440
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR-- 118
+ +V SA + LGSL +G+ +Y+ + + + +++ MY+KCGSI+ A +F +
Sbjct: 441 MVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTK 500
Query: 119 -VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
++ ++ W ++I A HG A++L+ + I P++I + +L AC H+GLVE
Sbjct: 501 NISSSTISPWNAIICGSATHGHAKLALDLYSDLQ-SLPIKPNSITFVGVLSACCHAGLVE 559
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
G +F+SM D GI P +KHY C+ DLLG+ G+L+ A + I+ MP+ W LLSA
Sbjct: 560 LGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSA 619
Query: 238 CRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMR 285
R HGNVE+ ELAA +L+ + P G V+++N+Y G+W++ ++R
Sbjct: 620 SRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVR 667
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 104/185 (56%), Gaps = 5/185 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + L A ++FD+ ++ +S+T++I GYAQ+ +EA++LFR M I + TL
Sbjct: 117 YVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTL 176
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
ATV+SAC+ LG + + ++ L+ V T+LLHMY C ++ AR++FD + +
Sbjct: 177 ATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPE 236
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
++L W M+N Y+ G+ +A LF ++T + D + + +++ C +++ L
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEK-----DIVSWGTMIDGCLRKNQLDEALV 291
Query: 182 FFKSM 186
++ M
Sbjct: 292 YYTEM 296
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 40/282 (14%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+K + A +FD K+I+SW +MI G + EAL + M+R ++P +
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYS----------------- 104
+LSA A SKG ++ I G D +Q +++H Y+
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 105 --------------KCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKM 150
K G +++AREVFD+ DKD+ W +MI+ YA A++LF +M
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 151 TVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHE--DFGIAPTVKHYT-CLADLLG 207
++ PDAI S+ A S G +E+G K H+ +F P + T + D+
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEG----KRAHDYLNFSTIPPNDNLTAAIIDMYA 484
Query: 208 RVGQLDLAVDAIQGMP--LDVQAQAWSCLLSACRIHGNVELG 247
+ G ++ A++ W+ ++ HG+ +L
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILS-----WTSMIAGYAQSGHPAEALDLFRRMVRTDIR 55
MYAKC ++ +A IF T KNI S W ++I G A GH ALDL+ + I+
Sbjct: 482 MYAKCGSIETALNIFHQT--KNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIK 539
Query: 56 PDGATLATVLSACADLGSLSKGQEIEEYIYL-YGLDLDQQVQTSLLHMYSKCGSIQKARE 114
P+ T VLSAC G + G+ E + +G++ D + ++ + K G +++A+E
Sbjct: 540 PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKE 599
Query: 115 VFDRVTDK-DLTIWTSMINCYAIHG 138
+ ++ K D+ IW +++ HG
Sbjct: 600 MIKKMPVKADVMIWGMLLSASRTHG 624
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 180/303 (59%), Gaps = 1/303 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y KC + +AR +FD +N+ +W+ MI GYA++ +A+DLF M R + + +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+V+S+CA LG+L G+ EY+ + ++ + T+L+ M+ +CG I+KA VF+ + +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
D W+S+I A+HG ++A++ F +M + +P + +T++L ACSH GLVE GL+
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQM-ISLGFIPRDVTFTAVLSACSHGGLVEKGLE 371
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
+++M +D GI P ++HY C+ D+LGR G+L A + I M + A LL AC+I+
Sbjct: 372 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIY 431
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
N E+ E L + P SG YVL++N+Y G+W + +R+++ K + K G S
Sbjct: 432 KNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSL 491
Query: 302 VEV 304
+E+
Sbjct: 492 IEI 494
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 125/267 (46%), Gaps = 34/267 (12%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
L A IF N+ + +I ++ P++A + +M+++ I PD T ++ A
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYS----------------------- 104
+++ + G++ I +G D V+ SL+HMY+
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 105 --------KCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERI 156
KCG ++ ARE+FD + ++L W+ MIN YA + +AI+LF M E +
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK-REGV 245
Query: 157 MPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAV 216
+ + V S++ +C+H G +E G + ++ + + + T L D+ R G ++ A+
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG-TALVDMFWRCGDIEKAI 304
Query: 217 DAIQGMPLDVQAQAWSCLLSACRIHGN 243
+G+P + + +WS ++ +HG+
Sbjct: 305 HVFEGLP-ETDSLSWSSIIKGLAVHGH 330
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
M+ +C ++ A +F+ + LSW+S+I G A GH +A+ F +M+ P T
Sbjct: 293 MFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVT 352
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLH 101
VLSAC+ G + KG EI E + D ++ L H
Sbjct: 353 FTAVLSACSHGGLVEKGLEIYE-----NMKKDHGIEPRLEH 388
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 179/319 (56%), Gaps = 15/319 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y C L AR++FD ++++SW SMI + G AL LFR M R+ PDG T
Sbjct: 195 LYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYT 253
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ----VQTSLLHMYSKCGSIQKAREVF 116
+ +VLSACA LGSLS G ++ L D+D V+ SL+ MY KCGS++ A +VF
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHAFL-LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVF 312
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMT-VEERIMPDAIVYTSILLACSHSGL 175
+ +DL W +MI +A HG EA+N F +M E + P+++ + +L+AC+H G
Sbjct: 313 QGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGF 372
Query: 176 VEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
V G ++F M D+ I P ++HY C+ DL+ R G + A+D + MP+ A W LL
Sbjct: 373 VNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Query: 236 SACRIHG-NVELGELAAAKL------SDLSPGS-SGSYVLMANLYTSLGKWKEAHIMRNL 287
AC G +VEL E A + ++ S G+ SG+YVL++ +Y S +W + I+R L
Sbjct: 433 DACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKL 492
Query: 288 IDGKELVKECGRSQVEVKA 306
+ + KE G S +E+
Sbjct: 493 MSEHGIRKEPGCSSIEING 511
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 7/243 (2%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQS-GHPAEALDLFRRMV-RTDIRPDGATLATV 64
++ A R+FD + W ++I A EA L+R+M+ R + PD T V
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 65 LSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL 124
L ACA + S+G+++ I +G D V L+H+Y CG + AR+VFD + ++ L
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL 217
Query: 125 TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL--KF 182
W SMI+ G + A+ LF +M + PD S+L AC+ G + G
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREM--QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHA 275
Query: 183 FKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
F D +A V L ++ + G L +A QGM A +W+ ++ HG
Sbjct: 276 FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLA-SWNAMILGFATHG 334
Query: 243 NVE 245
E
Sbjct: 335 RAE 337
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 177/306 (57%), Gaps = 2/306 (0%)
Query: 1 MYAKCDNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY C +L +F D + +SW +++ Q P E L LF+ M+ ++ PD
Sbjct: 415 MYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHI 474
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T+ +L C ++ SL G ++ Y GL +Q ++ L+ MY+KCGS+ +AR +FD +
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++D+ W+++I YA G G EA+ LF +M I P+ + + +L ACSH GLVE+G
Sbjct: 535 DNRDVVSWSTLIVGYAQSGFGEEALILFKEMK-SAGIEPNHVTFVGVLTACSHVGLVEEG 593
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
LK + +M + GI+PT +H +C+ DLL R G+L+ A I M L+ W LLSAC+
Sbjct: 594 LKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACK 653
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
GNV L + AA + + P +S ++VL+ +++ S G W+ A ++R+ + ++ K G+
Sbjct: 654 TQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQ 713
Query: 300 SQVEVK 305
S +E++
Sbjct: 714 SWIEIE 719
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC +L AR +FD +N++S+TS+I GY+Q+G AEA+ L+ +M++ D+ PD
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+++ ACA + G+++ + Q +L+ MY + + A VF +
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
KDL W+S+I ++ G EA++ +M P+ ++ S L ACS
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 109/240 (45%), Gaps = 12/240 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYA+C L SARR+FD + SW +IAG A +G+ EA+ +F +M + PD +
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF-DRV 119
L ++L A +LS+G +I YI +G D V SLL MY+ C + +F D
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE-D 178
+ D W +++ H E + LF M V E PD I ++L C VE
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE-CEPDHITMGNLLRGC-----VEIS 487
Query: 179 GLKFFKSMH---EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
LK +H G+AP L D+ + G L A M + +WS L+
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLI 546
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI-RPDGA 59
MY + + ++ A R+F K+++SW+S+IAG++Q G EAL + M+ + P+
Sbjct: 212 MYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 271
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ L AC+ L G +I L + SL MY++CG + AR VFD++
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
D W +I A +G +EA+++F +M +PDAI S+L A + + G
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMR-SSGFIPDAISLRSLLCAQTKPMALSQG 390
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
++ + + +G + L + L + + + + +W+ +L+AC
Sbjct: 391 MQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACL 449
Query: 240 IH 241
H
Sbjct: 450 QH 451
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 11/199 (5%)
Query: 41 EALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLL 100
EA D ++ IR T +++ AC+ SL++G++I ++I D + +L
Sbjct: 52 EAFDFAQKNSSFKIRL--RTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHIL 109
Query: 101 HMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDA 160
MY KCGS++ AREVFD + +++L +TS+I Y+ +G G EAI L+ KM ++E ++PD
Sbjct: 110 SMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKM-LQEDLVPDQ 168
Query: 161 IVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLG---RVGQLDLAVD 217
+ SI+ AC+ S V G K +H + H L+ R Q+ A
Sbjct: 169 FAFGSIIKACASSSDVGLG----KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224
Query: 218 AIQGMPLDVQAQAWSCLLS 236
G+P+ +WS +++
Sbjct: 225 VFYGIPMK-DLISWSSIIA 242
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 178/305 (58%), Gaps = 2/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + AR++FD +N+++W+ M+ GYAQ G EAL LF+ + ++ + +
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++V+S CA+ L G++I D V +SL+ +YSKCG + A +VF+ V
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K+L IW +M+ YA H + I LF +M + + P+ I + ++L ACSH+GLV++G
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG-MKPNFITFLNVLNACSHAGLVDEGR 338
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F M E I PT KHY L D+LGR G+L A++ I MP+D W LL++C +
Sbjct: 339 YYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTV 397
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H N EL AA K+ +L P SSG ++ ++N Y + G++++A R L+ + KE G S
Sbjct: 398 HKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLS 457
Query: 301 QVEVK 305
VE +
Sbjct: 458 WVEER 462
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 98/179 (54%), Gaps = 1/179 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y+K +RR F+ + K+ +W+S+I+ +AQ+ P +L+ ++M+ ++RPD
Sbjct: 59 FYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHV 118
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L + +CA L G+ + G D D V +SL+ MY+KCG I AR++FD +
Sbjct: 119 LPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP 178
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+++ W+ M+ YA G EA+ LF + E + D ++S++ C++S L+E G
Sbjct: 179 QRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND-YSFSSVISVCANSTLLELG 236
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 172/304 (56%), Gaps = 1/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y+KC A ++F + +N+++W SMI+ Y+++ P ++DLF M+ I PD +
Sbjct: 520 LYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVS 579
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +VL A + SL KG+ + Y G+ D ++ +L+ MY KCG + A +F ++
Sbjct: 580 ITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ 639
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K L W MI Y HG A++LF +M PD + + S++ AC+HSG VE+G
Sbjct: 640 HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE-SPDDVTFLSLISACNHSGFVEEGK 698
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
F+ M +D+GI P ++HY + DLLGR G L+ A I+ MP++ + W CLLSA R
Sbjct: 699 NIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRT 758
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H NVELG L+A KL + P +YV + NLY G EA + L+ K L K+ G S
Sbjct: 759 HHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCS 818
Query: 301 QVEV 304
+EV
Sbjct: 819 WIEV 822
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 122/237 (51%), Gaps = 3/237 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC + A +F K + W +M+A YA++ + ALDLF M + + PD T
Sbjct: 316 MYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFT 375
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L+ V+S C+ LG + G+ + ++ + ++++LL +YSKCG A VF +
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME 435
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMT-VEERIMPDAIVYTSILLACSHSGLVEDG 179
+KD+ W S+I+ +G EA+ +F M ++ + PD+ + TS+ AC+ + G
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
L+ SM + G+ V + L DL + G ++A+ M + AW+ ++S
Sbjct: 496 LQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMIS 550
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 110/189 (58%), Gaps = 7/189 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD--IRPDG 58
+Y+KC A +F K++++W S+I+G ++G EAL +F M D ++PD
Sbjct: 417 LYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
+ +V +ACA L +L G ++ + GL L+ V +SL+ +YSKCG + A +VF
Sbjct: 477 DIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
++ +++ W SMI+CY+ + + +I+LF+ M + + I PD++ TS+L+A S + +
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLM-LSQGIFPDSVSITSVLVAISSTASLLK 595
Query: 179 GLKFFKSMH 187
G KS+H
Sbjct: 596 G----KSLH 600
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 6/207 (2%)
Query: 1 MYAKCDNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY K A R+F ++ N++ W MI G+ SG +LDL+ ++
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST 273
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ L AC+ + G++I + GL D V TSLL MYSKCG + +A VF V
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
DK L IW +M+ YA + G A++LF M ++ ++PD+ ++++ CS GL G
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLFGFMR-QKSVLPDSFTLSNVISCCSVLGLYNYG 392
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLL 206
KS+H + P T + LL
Sbjct: 393 ----KSVHAELFKRPIQSTSTIESALL 415
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 19/250 (7%)
Query: 1 MYAKCDNLTSARRIFDL-------TAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD 53
MY KC L A ++FD + +++ W SMI GY + E + FRRM+
Sbjct: 104 MYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG 163
Query: 54 IRPDGATLATVLSACADLGSLSK--GQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQK 111
+RPD +L+ V+S G+ + G++I ++ LD D ++T+L+ MY K G
Sbjct: 164 VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSID 223
Query: 112 AREVFDRVTDK-DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
A VF + DK ++ +W MI + G+ +++L+ + + + +T L AC
Sbjct: 224 AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY-MLAKNNSVKLVSTSFTGALGAC 282
Query: 171 SHSGLVEDGLKFFKSMHED---FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQ 227
S S + F + +H D G+ T L + + G + A + + +D +
Sbjct: 283 SQS----ENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEA-ETVFSCVVDKR 337
Query: 228 AQAWSCLLSA 237
+ W+ +++A
Sbjct: 338 LEIWNAMVAA 347
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRM-VRTDIRPDGATLATVLSACADLGSLSKGQEIEEY 83
S S I Q G +AL L+ + + T ++L AC+ L +LS G+ I
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 84 IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD-------RVTDKDLTIWTSMINCYAI 136
+ + G D + TSL++MY KCG + A +VFD V+ +D+T+W SMI+ Y
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 137 HGMGNEAINLFHKMTVEERIMPDAI 161
E + F +M V + PDA
Sbjct: 146 FRRFKEGVGCFRRMLV-FGVRPDAF 169
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 173/306 (56%), Gaps = 2/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC+ A IF + +SWT++I+GY Q G L LF +M +++R D +T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
ATVL A A SL G+++ +I G + + L+ MY+KCGSI+ A +VF+ +
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D++ W ++I+ +A +G G AI F KM +E + PD++ +L ACSH G VE G
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKM-IESGLQPDSVSILGVLTACSHCGFVEQGT 573
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++F++M +GI P KHY C+ DLLGR G+ A + MP + WS +L+ACRI
Sbjct: 574 EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRI 633
Query: 241 HGNVELGELAAAKLSDLSP-GSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
H N L E AA KL + + +YV M+N+Y + G+W++ ++ + + + K
Sbjct: 634 HKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAY 693
Query: 300 SQVEVK 305
S VEV
Sbjct: 694 SWVEVN 699
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 11/266 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y+K D + R +FD + +S+ +I+ Y+Q+ +L FR M
Sbjct: 294 FYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP 353
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
AT+LS A+L SL G+++ L D V SL+ MY+KC ++A +F +
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ WT++I+ Y G+ + LF KM + D + ++L A + L
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMR-GSNLRADQSTFATVLKASASFA----SL 468
Query: 181 KFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
K +H G V + L D+ + G + AV + MP D A +W+ L+SA
Sbjct: 469 LLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527
Query: 238 CRIHGNVELGELAAAKL--SDLSPGS 261
+G+ E A AK+ S L P S
Sbjct: 528 HADNGDGEAAIGAFAKMIESGLQPDS 553
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD--IRPDGA 59
+ K +++SAR +FD + +++WT ++ YA++ H EA LFR+M R+ PD
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQ--QVQTSLLHMYSKCGSIQKAREVFD 117
T T+L C D + ++ + G D + V LL Y + + A +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLA 169
+ +KD + ++I Y G+ E+I+LF KM + P ++ +L A
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR-QSGHQPSDFTFSGVLKA 259
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + L A +F+ K+ +++ ++I GY + G E++ LF +M ++ +P T
Sbjct: 194 YCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+ VL A L + GQ++ G D V +L YSK + + R +FD + +
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKM 150
D + +I+ Y+ +++ F +M
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREM 342
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 170/304 (55%), Gaps = 1/304 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y ++ A+ IF KNILSW MI+G A++G E L LF M R P
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+ + +CA LG+ GQ+ + G D +L+ MY+KCG +++AR+VF +
Sbjct: 421 SGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC 480
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
D W ++I HG G EA++++ +M +++ I PD I ++L ACSH+GLV+ G K
Sbjct: 481 LDSVSWNALIAALGQHGHGAEAVDVYEEM-LKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
+F SM + I P HY L DLL R G+ A I+ +P A+ W LLS CR+H
Sbjct: 540 YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
GN+ELG +AA KL L P G+Y+L++N++ + G+W+E +R L+ + + KE S
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSW 659
Query: 302 VEVK 305
+E++
Sbjct: 660 IEME 663
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 43/230 (18%)
Query: 1 MYAKCDN----LTSARRIFDLTAGKNILSWTSMIAGYAQSGH------------------ 38
+Y+KC + L SAR++FD K+ SWT+M+ GY ++G+
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 39 --------------PAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
EAL++ RRMV + I D T +V+ ACA G L G+++ Y+
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAI 144
L D SL+ +Y KCG +AR +F+++ KDL W ++++ Y G EA
Sbjct: 313 -LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 145 NLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAP 194
+F +M E+ I+ I+ + + + +G E+GLK F M + G P
Sbjct: 372 LIFKEMK-EKNILSWMIMISGL----AENGFGEEGLKLFSCMKRE-GFEP 415
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + AR++F + +SW ++IA Q GH AEA+D++ M++ IRPD T
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 61 LATVLSACADLGSLSKGQE-IEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
L TVL+AC+ G + +G++ + +Y + L+ + + G A V + +
Sbjct: 521 LLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL 580
Query: 120 TDKDLT-IWTSMINCYAIHG 138
K IW ++++ +HG
Sbjct: 581 PFKPTAEIWEALLSGCRVHG 600
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 123/299 (41%), Gaps = 62/299 (20%)
Query: 2 YAKCDNLTSARRIFDLTA--GKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
Y ++T AR +F+ ++ + + +MI G++ + A++LF +M +PD
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 60 TLATVLSACADLGSLSKG-QEIEEYIYLYGLDLDQQVQTSLLHMYSKCGS----IQKARE 114
T A+VL+ A + K + G V +L+ +YSKC S + AR+
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 115 VFDRVTDKDLTIWTS--------------------------------MINCYAIHGMGNE 142
VFD + +KD WT+ MI+ Y G E
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 143 AINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH------EDFGIAPTV 196
A+ + +M V I D Y S++ AC+ +GL++ G K +H EDF
Sbjct: 270 ALEMVRRM-VSSGIELDEFTYPSVIRACATAGLLQLG----KQVHAYVLRREDFSF---- 320
Query: 197 KHY-TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKL 254
H+ L L + G+ D A + MP +W+ LLS G V G + AKL
Sbjct: 321 -HFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLS-----GYVSSGHIGEAKL 372
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 172/304 (56%), Gaps = 3/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
++AK A +FD + + W S+I G+AQ+ AL+LF+RM R + AT
Sbjct: 203 VFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 262
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +VL AC L L G + +I Y D D + +L+ MY KCGS++ A VF+++
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++D+ W++MI+ A +G EA+ LF +M P+ I +L ACSH+GL+EDG
Sbjct: 321 ERDVITWSTMISGLAQNGYSQEALKLFERMK-SSGTKPNYITIVGVLFACSHAGLLEDGW 379
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F+SM + +GI P +HY C+ DLLG+ G+LD AV + M + A W LL ACR+
Sbjct: 380 YYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRV 439
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
N+ L E AA K+ L P +G+Y L++N+Y + KW +R + + + KE G S
Sbjct: 440 QRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCS 499
Query: 301 QVEV 304
+EV
Sbjct: 500 WIEV 503
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K + L A ++FD +N++SWT+MI+ Y++ +AL+L M+R ++RP+ T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++VL +C +S + + I GL+ D V+++L+ +++K G + A VFD +
Sbjct: 165 YSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D +W S+I +A + + A+ LF +M I A + TS+L AC+ L+E G+
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL-TSVLRACTGLALLELGM 280
Query: 181 K 181
+
Sbjct: 281 Q 281
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
D AT + ++ C ++ +G I ++Y G + L++MY K + A ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS----- 171
D++ +++ WT+MI+ Y+ + +A+ L M + + + P+ Y+S+L +C+
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLM-LRDNVRPNVYTYSSVLRSCNGMSDV 178
Query: 172 ---HSGLVEDGLK 181
H G++++GL+
Sbjct: 179 RMLHCGIIKEGLE 191
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 180/339 (53%), Gaps = 36/339 (10%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFR------------- 47
MYAKC L SA+ +FD KN +SWT+M++GYA+SG EAL+LFR
Sbjct: 149 MYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTAL 208
Query: 48 --------------------RMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLY 87
R R DI D L++++ ACA+L + G+++ +
Sbjct: 209 ISGFVQSGKGLEAFSVFTEMRRERVDIL-DPLVLSSIVGACANLAASIAGRQVHGLVIAL 267
Query: 88 GLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLF 147
G D + +L+ MY+KC + A+++F R+ +D+ WTS+I A HG +A+ L+
Sbjct: 268 GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALY 327
Query: 148 HKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLG 207
M V + P+ + + ++ ACSH G VE G + F+SM +D+GI P+++HYTCL DLLG
Sbjct: 328 DDM-VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLG 386
Query: 208 RVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELG-ELAAAKLSDLSPGSSGSYV 266
R G LD A + I MP W+ LLSAC+ G ++G +A +S +Y+
Sbjct: 387 RSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYI 446
Query: 267 LMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEVK 305
L++N+Y S W + R + E+ K+ G S VEV+
Sbjct: 447 LLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVR 485
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
+Y KC + A ++FD ++ ++W S++ Q+ + L +F + + +RPD
Sbjct: 47 VYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDF 106
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ ++ ACA+LGS+ G+++ + + D+ V++SL+ MY+KCG + A+ VFD +
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 166
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
K+ WT+M++ YA G EA+ LF RI+P +Y+ L SG V+ G
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELF-------RILPVKNLYSWTALI---SGFVQSG 216
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
Query: 65 LSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL 124
L CA +L+ + + +I G+ + +L+++Y KCG+ A +VFD + +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 125 TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFK 184
W S++ + + +++F + + PD V+++++ AC++ G ++ G +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG----R 125
Query: 185 SMHEDFGIAPTVKH---YTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
+H F ++ + L D+ + G L+ A + + +W+ ++S
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKS 184
Query: 242 GNVE 245
G E
Sbjct: 185 GRKE 188
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 175/304 (57%), Gaps = 3/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY +C + + R+F N +SWTS+I+G Q+G AL FR+M+R I+P+ T
Sbjct: 311 MYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFT 370
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L++ L C++L +G++I + YG D D+ + L+ +Y KCG AR VFD ++
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS 430
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ D+ +MI YA +G G EA++LF +M + + P+ + S+LLAC++S LVE+G
Sbjct: 431 EVDVISLNTMIYSYAQNGFGREALDLFERM-INLGLQPNDVTVLSVLLACNNSRLVEEGC 489
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F S +D I T HY C+ DLLGR G+L+ A + + ++ W LLSAC++
Sbjct: 490 ELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKV 547
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H VE+ E K+ ++ PG G+ +LM+NLY S GKW M++ + +L K S
Sbjct: 548 HRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMS 607
Query: 301 QVEV 304
VE+
Sbjct: 608 WVEI 611
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 133/261 (50%), Gaps = 6/261 (2%)
Query: 4 KCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLAT 63
KC ++ AR++FD + ++I++W S+IA + EA++++R M+ ++ PD TL++
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQ-VQTSLLHMYSKCGSIQKAREVFDRVTDK 122
V A +DL + Q + GL++ V ++L+ MY K G ++A+ V DRV +K
Sbjct: 171 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230
Query: 123 DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKF 182
D+ + T++I Y+ G EA+ F M V E++ P+ Y S+L++C + + +G K
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLV-EKVQPNEYTYASVLISCGNLKDIGNG-KL 288
Query: 183 FKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
+ G + T L + R +D ++ + + Q +W+ L+S +G
Sbjct: 289 IHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQV-SWTSLISGLVQNG 347
Query: 243 NVELGELAAAKL--SDLSPGS 261
E+ + K+ + P S
Sbjct: 348 REEMALIEFRKMMRDSIKPNS 368
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K A+ + D K+++ T++I GY+Q G EA+ F+ M+ ++P+ T
Sbjct: 210 MYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYT 269
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A+VL +C +L + G+ I + G + QTSLL MY +C + + VF +
Sbjct: 270 YASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIE 329
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ WTS+I+ +G A+ F KM + + I P++ +S L CS+ + E+G
Sbjct: 330 YPNQVSWTSLISGLVQNGREEMALIEFRKM-MRDSIKPNSFTLSSALRGCSNLAMFEEG- 387
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
+ + +G + L DL G+ G D+A
Sbjct: 388 RQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/267 (39%), Positives = 163/267 (61%), Gaps = 1/267 (0%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N++SWT++ +G +++G+ AL +F +M + P+ AT++T+L L L G+E+
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGN 141
+ L D V T+L+ MY K G +Q A E+F + +K L W M+ YA+ G G
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGE 479
Query: 142 EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTC 201
E I F M +E + PDAI +TS+L C +SGLV++G K+F M +GI PT++H +C
Sbjct: 480 EGIAAFSVM-LEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 202 LADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGS 261
+ DLLGR G LD A D IQ M L A W LS+C+IH ++EL E+A +L L P +
Sbjct: 539 MVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHN 598
Query: 262 SGSYVLMANLYTSLGKWKEAHIMRNLI 288
S +Y++M NLY++L +W++ +RNL+
Sbjct: 599 SANYMMMINLYSNLNRWEDVERIRNLM 625
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 123/231 (53%), Gaps = 5/231 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y +C +L A ++FD ++ L+W ++ +SG+ +A++LFR M + + +T
Sbjct: 32 FYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDST 91
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +L C++ ++G++I Y+ GL+ + + SL+ MYS+ G ++ +R+VF+ +
Sbjct: 92 MVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D++L+ W S+++ Y G ++AI L +M + + PD + + S+L + GL +D +
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG-LKPDIVTWNSLLSGYASKGLSKDAI 210
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAW 231
K M + G+ P+ + L + G L L AI G L + Q W
Sbjct: 211 AVLKRM-QIAGLKPSTSSISSLLQAVAEPGHLKLG-KAIHGYIL--RNQLW 257
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 128/296 (43%), Gaps = 73/296 (24%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+I++W S+++GYA G +A+ + +RM ++P ++++++L A A+ G L G+ I
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMIN-----C--- 133
YI L D V+T+L+ MY K G + AR VFD + K++ W S+++ C
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 134 ---------------------------YAIHGMGNEAINLFHKMTVEERIMPDAIVYTSI 166
YA G +A+++ KM E+ + P+ + +T+I
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK-EKGVAPNVVSWTAI 367
Query: 167 LLACSHSGLVEDGLKFFKSMHEDFGIAPTV----------------------------KH 198
CS +G + LK F M E+ G+ P K+
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEE-GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 199 YTC-------LADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELG 247
C L D+ G+ G L A++ G+ + +W+C+L + G E G
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIK-NKSLASWNCMLMGYAMFGRGEEG 481
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K +L SA IF K++ SW M+ GYA G E + F M+ + PD T
Sbjct: 440 MYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAIT 499
Query: 61 LATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+VLS C + G + +G + + + YG+ + + ++ + + G + +A + +
Sbjct: 500 FTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM 559
Query: 120 TDK-DLTIWTSMINCYAIH 137
+ K D TIW + ++ IH
Sbjct: 560 SLKPDATIWGAFLSSCKIH 578
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 174/307 (56%), Gaps = 5/307 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC +L SARR+F+ K+ ++WT+MI Y+Q+G +EA LF M +T + PD T
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L+TVLSAC +G+L G++IE + L + V T L+ MY KCG +++A VF+ +
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K+ W +MI YA G EA+ LF +M+V P I + +L AC H+GLV G
Sbjct: 397 VKNEATWNAMITAYAHQGHAKEALLLFDRMSVP----PSDITFIGVLSACVHAGLVHQGC 452
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++F M FG+ P ++HYT + DLL R G LD A + ++ P + +L AC
Sbjct: 453 RYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHK 512
Query: 241 HGNVELGELAAAKLSDLSPG-SSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+V + E A L ++ ++G+YV+ +N+ + W E+ MR L+ + +VK G
Sbjct: 513 RKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGC 572
Query: 300 SQVEVKA 306
S +E++
Sbjct: 573 SWIEIEG 579
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 144/255 (56%), Gaps = 3/255 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + AR++FD ++ +SW SMI+GY+++G+ +A+DLFR+M PD T
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L ++L AC+ LG L G+ +EE + L + + L+ MY KCG + AR VF+++
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMI 295
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD WT+MI Y+ +G +EA LF +M + + PDA +++L AC G +E G
Sbjct: 296 KKDRVAWTAMITVYSQNGKSSEAFKLFFEME-KTGVSPDAGTLSTVLSACGSVGALELG- 353
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K ++ + + + T L D+ G+ G+++ A+ + MP+ +A W+ +++A
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA-TWNAMITAYAH 412
Query: 241 HGNVELGELAAAKLS 255
G+ + L ++S
Sbjct: 413 QGHAKEALLLFDRMS 427
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 12/235 (5%)
Query: 14 IFDLTAGKNILSWTSMIAGYAQSGHPAEA-LDLFRRMVRTDIRPDGATLATVLSACADLG 72
+F +T N S+ MI G + + EA L L+RRM + ++PD T V ACA L
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 73 SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMIN 132
+ G+ + ++ GL+ D + SL+ MY+KCG + AR++FD +T++D W SMI+
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 206
Query: 133 CYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGI 192
Y+ G +A++LF KM EE PD S+L ACSH G + G + E+ I
Sbjct: 207 GYSEAGYAKDAMDLFRKME-EEGFEPDERTLVSMLGACSHLGDLRTG-----RLLEEMAI 260
Query: 193 APTVKHYTCLADLL----GRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGN 243
+ T L L G+ G LD A M + AW+ +++ +G
Sbjct: 261 TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM-IKKDRVAWTAMITVYSQNGK 314
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 176/307 (57%), Gaps = 5/307 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y C + AR++FD +N++SW S++ ++G + F M+ PD T
Sbjct: 157 LYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETT 216
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +LSAC G+LS G+ + + + L+L+ ++ T+L+ MY+K G ++ AR VF+R+
Sbjct: 217 MVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMV 274
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
DK++ W++MI A +G EA+ LF KM E + P+ + + +L ACSH+GLV+DG
Sbjct: 275 DKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGY 334
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K+F M + I P + HY + D+LGR G+L+ A D I+ MP + A W LLSAC I
Sbjct: 335 KYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSI 394
Query: 241 HGNVE---LGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKEC 297
H + + +GE +L +L P SG+ V++AN + W EA +R ++ ++ K
Sbjct: 395 HHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIA 454
Query: 298 GRSQVEV 304
G S +E+
Sbjct: 455 GESCLEL 461
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 11/242 (4%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
+L AR + ++ +W + GY+ S P E++ ++ M R I+P+ T +L
Sbjct: 62 DLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLK 121
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
ACA L+ G++I+ + +G D D V +L+H+Y C AR+VFD +T++++
Sbjct: 122 ACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS 181
Query: 127 WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM 186
W S++ +G N F +M + +R PD +L AC L K +
Sbjct: 182 WNSIMTALVENGKLNLVFECFCEM-IGKRFCPDETTMVVLLSACG------GNLSLGKLV 234
Query: 187 HEDFGIAP---TVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGN 243
H + + T L D+ + G L+ A + M +D WS ++ +G
Sbjct: 235 HSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERM-VDKNVWTWSAMIVGLAQYGF 293
Query: 244 VE 245
E
Sbjct: 294 AE 295
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 211 bits (537), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 178/309 (57%), Gaps = 15/309 (4%)
Query: 5 CDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGH-PAEALDLFRRMVRTDIRPDGATLAT 63
CD + + ++F +++ W +MI+GY+ + EA+ FR+M R RPD +
Sbjct: 291 CDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC 350
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQ-------VQTSLLHMYSKCGSIQKAREVF 116
V SAC++L S S+ ++I +GL + V +L+ +Y K G++Q AR VF
Sbjct: 351 VTSACSNLSSPSQCKQI------HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVF 404
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
DR+ + + + MI YA HG G EA+ L+ +M ++ I P+ I + ++L AC+H G V
Sbjct: 405 DRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM-LDSGIAPNKITFVAVLSACAHCGKV 463
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
++G ++F +M E F I P +HY+C+ DLLGR G+L+ A I MP + AW+ LL
Sbjct: 464 DEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG 523
Query: 237 ACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKE 296
ACR H N+ L E AA +L + P ++ YV++AN+Y KW+E +R + GK + K+
Sbjct: 524 ACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKK 583
Query: 297 CGRSQVEVK 305
G S +EVK
Sbjct: 584 PGCSWIEVK 592
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 10/178 (5%)
Query: 2 YAKCDNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y+K L A +F + ++ +SW SMI Y Q A+AL L++ M+ + D T
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCG---SIQKAREVFD 117
LA+VL+A L L G++ + G + V + L+ YSKCG + + +VF
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 118 RVTDKDLTIWTSMINCYAIH-GMGNEAINLFHKMTVEERI--MPDAIVYTSILLACSH 172
+ DL +W +MI+ Y+++ + EA+ F +M +RI PD + + ACS+
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM---QRIGHRPDDCSFVCVTSACSN 357
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y K NL AR +FD N +S+ MI GYAQ GH EAL L++RM+ + I P+ T
Sbjct: 390 LYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 61 LATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
VLSACA G + +GQE + + ++ + + + ++ + + G +++A D +
Sbjct: 450 FVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM 509
Query: 120 TDKDLTI-WTSMI 131
K ++ W +++
Sbjct: 510 PYKPGSVAWAALL 522
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YAK + AR++FD + +S+ ++I+GYA + A+ LF+RM + DG TL
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+ +++AC D L K ++ + G D V + + YSK G +++A VF + +
Sbjct: 144 SGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE 201
Query: 122 -KDLTIWTSMINCYAIHGMGNEAINLFHKMTVE 153
+D W SMI Y H G +A+ L+ +M +
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 176/304 (57%), Gaps = 4/304 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEAL-DLFRRM-VRTDIRPDGA 59
+ + ++ +A+ +FD ++++SW S++ GY++ G + +LF M + ++PD
Sbjct: 310 FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRV 369
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T+ +++S A+ G LS G+ + + L D + ++L+ MY KCG I++A VF
Sbjct: 370 TMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTA 429
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
T+KD+ +WTSMI A HG G +A+ LF +M EE + P+ + ++L ACSHSGLVE+G
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRMQ-EEGVTPNNVTLLAVLTACSHSGLVEEG 488
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQ-GMPLDVQAQAWSCLLSAC 238
L F M + FG P +HY L DLL R G+++ A D +Q MP+ W +LSAC
Sbjct: 489 LHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSAC 548
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
R ++E ELA +L L P G YVL++N+Y ++G+W + R ++ + + K G
Sbjct: 549 RGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAG 608
Query: 299 RSQV 302
S V
Sbjct: 609 YSSV 612
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 36/277 (12%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y + N A ++F ++ S+ MI GYA+ G EAL L+ +MV I PD T
Sbjct: 175 FYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYT 234
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ--VQTSLLHMYSKC------------ 106
+ ++L C L + G+ + +I G + +LL MY KC
Sbjct: 235 VLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDA 294
Query: 107 -------------------GSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAIN-L 146
G ++ A+ VFD++ +DL W S++ Y+ G + L
Sbjct: 295 MKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVREL 354
Query: 147 FHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLL 206
F++MT+ E++ PD + S++ +++G + G ++ + + + L D+
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHG-RWVHGLVIRLQLKGDAFLSSALIDMY 413
Query: 207 GRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGN 243
+ G ++ A + + W+ +++ HGN
Sbjct: 414 CKCGIIERAFMVFK-TATEKDVALWTSMITGLAFHGN 449
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 6 DNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATV 64
+NL A+ +F + T N+ + +MI+ + S + E L+ M+R + PD T +
Sbjct: 82 ENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYL 139
Query: 65 LSACADLGSLSKGQEIEEYIYLYG-LDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKD 123
+ A + LS+ ++I +I + G L L + SL+ Y + G+ A +VF R+ D
Sbjct: 140 MKASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPD 196
Query: 124 LTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
++ + MI YA G EA+ L+ KM V + I PD S+L+ C H
Sbjct: 197 VSSFNVMIVGYAKQGFSLEALKLYFKM-VSDGIEPDEYTVLSLLVCCGH 244
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC + A +F K++ WTSMI G A G+ +AL LF RM + P+ T
Sbjct: 412 MYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVT 471
Query: 61 LATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
L VL+AC+ G + +G + ++ +G D + + SL+ + + G +++A+++ +
Sbjct: 472 LLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQK 530
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 210 bits (535), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 170/299 (56%), Gaps = 2/299 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC +L A +F T ++ +W S+I+GYAQ EA L R M+ +P+ T
Sbjct: 324 MYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLD-QQVQTSLLHMYSKCGSIQKAREVFDRV 119
LA++L CA + +L G+E YI D + SL+ +Y+K G I A++V D +
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+ +D +TS+I+ Y G G A+ LF +MT I PD + ++L ACSHS LV +G
Sbjct: 444 SKRDEVTYTSLIDGYGNQGEGGVALALFKEMT-RSGIKPDHVTVVAVLSACSHSKLVHEG 502
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ F M ++GI P ++H++C+ DL GR G L A D I MP W+ LL+AC
Sbjct: 503 ERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACH 562
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
IHGN ++G+ AA KL ++ P + G YVL+AN+Y + G W + +R ++ + K+ G
Sbjct: 563 IHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPG 621
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 70/127 (55%)
Query: 24 LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEY 83
L W +IA YA++ E + ++RMV IRPD T +VL AC + ++ G+ +
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 84 IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEA 143
I + V +L+ MY + ++ AR +FDR+ ++D W ++INCYA GM +EA
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 144 INLFHKM 150
LF KM
Sbjct: 230 FELFDKM 236
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP---- 56
MY + N+ ARR+FD ++ +SW ++I YA G +EA +LF +M + +
Sbjct: 188 MYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVIT 247
Query: 57 -------------------------------DGATLATVLSACADLGSLSKGQEIEEYIY 85
D + L AC+ +G++ G+EI
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAIN 145
D V+ +L+ MYSKC ++ A VF + + L W S+I+ YA EA +
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASH 367
Query: 146 LFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKF 182
L +M V P++I SIL C+ ++ G +F
Sbjct: 368 LLREMLVAG-FQPNSITLASILPLCARIANLQHGKEF 403
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Query: 34 AQSGHPAEALDLFR--RMVRTDIRPDGATL---ATVLSACADLGSLSKGQEIEEYIYLYG 88
A GH +A F R+ + D L A++LSAC D+ + G ++ + G
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 89 LDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFH 148
++ + L+ YS +A+ + + W +I YA + + E I +
Sbjct: 74 VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYK 133
Query: 149 KMTVEERIMPDAIVYTSILLAC 170
+M V + I PDA Y S+L AC
Sbjct: 134 RM-VSKGIRPDAFTYPSVLKAC 154
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 168/305 (55%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC ++ A IF+ T + +S T ++ G AQ+G EA+ F RM++ + D
Sbjct: 300 MYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV 359
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++ VL SL G+++ + + V L++MYSKCG + ++ VF R+
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP 419
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++ W SMI +A HG G A+ L+ +MT E + P + + S+L ACSH GL++ G
Sbjct: 420 KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE-VKPTDVTFLSLLHACSHVGLIDKGR 478
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ M E GI P +HYTC+ D+LGR G L A I +PL + W LL AC
Sbjct: 479 ELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSF 538
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HG+ E+GE AA +L +P SS +++L+AN+Y+S GKWKE + + KE G S
Sbjct: 539 HGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGIS 598
Query: 301 QVEVK 305
+E++
Sbjct: 599 SIEIE 603
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 130/258 (50%), Gaps = 17/258 (6%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y KC S R +FD + +N+++ T++I+G ++ + L LF M R + P+ T
Sbjct: 200 YFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTY 259
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+ L+AC+ + +GQ+I ++ YG++ + ++++L+ MYSKCGSI+ A +F+ T+
Sbjct: 260 LSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTE 319
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
D T ++ A +G EAI F +M ++ + DA V +++L +++ L
Sbjct: 320 VDEVSMTVILVGLAQNGSEEEAIQFFIRM-LQAGVEIDANVVSAVLGV----SFIDNSLG 374
Query: 182 FFKSMH-----EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
K +H F V + L ++ + G L + + MP +W+ +++
Sbjct: 375 LGKQLHSLVIKRKFSGNTFVNN--GLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIA 431
Query: 237 ACRIHGNVELGELAAAKL 254
A HG+ LAA KL
Sbjct: 432 AFARHGH----GLAALKL 445
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC L A ++FD ++++S + G+ ++ L +RM+ + D AT
Sbjct: 99 LYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHAT 157
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L VLS C + I L G D + V L+ Y KCG R VFD ++
Sbjct: 158 LTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMS 217
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+++ T++I+ + + + + LF M + P+++ Y S L ACS S + +G
Sbjct: 218 HRNVITLTAVISGLIENELHEDGLRLFSLMR-RGLVHPNSVTYLSALAACSGSQRIVEGQ 276
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLD 213
+ ++ +GI + + L D+ + G ++
Sbjct: 277 Q-IHALLWKYGIESELCIESALMDMYSKCGSIE 308
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 170/305 (55%), Gaps = 3/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY +C ++ SA ++F L + N+ SW +I+ +Q+ E LFR + + P+ T
Sbjct: 625 MYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEIT 681
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+LSA LGS S G + ++ G + V +L+ MYS CG ++ +VF
Sbjct: 682 FVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSG 741
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++ W S+I+ + HGMG +A+ LF +++ + P+ + S+L ACSHSG +++GL
Sbjct: 742 VNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGL 801
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++K M E FG+ P +H + D+LGR G+L A + I G+ +A W LLSAC
Sbjct: 802 SYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNY 861
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HG+ +LG+ A L ++ P ++ Y+ +AN Y LG W+EA +R +++ L K G S
Sbjct: 862 HGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYS 921
Query: 301 QVEVK 305
++V+
Sbjct: 922 VIDVR 926
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAK +NL+SA +F ++I+SW +++ +GHP ++L F+ M + D T
Sbjct: 232 LYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVT 291
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQ--TSLLHMYSKCGSIQKAREVFDR 118
+ V+SAC+ + L+ G+ + + G + V S++ MYSKCG + A VF+
Sbjct: 292 FSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEE 351
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ +D+ +++N +A +GM EA + ++M ++I PD SI C +
Sbjct: 352 LVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSRE 411
Query: 179 G 179
G
Sbjct: 412 G 412
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 13/261 (4%)
Query: 4 KCDNLTSAR-RIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGATL 61
K +LTSA R+ ++ +++ SW S+I+G A SGH E+L F+ M R IR D TL
Sbjct: 525 KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITL 584
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+SA +LG + +G+ +LD Q+Q +L+ MY +C I+ A +VF ++D
Sbjct: 585 LGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISD 644
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+L W +I+ + + G E LF + +E P+ I + +L A + G G++
Sbjct: 645 PNLCSWNCVISALSQNKAGREVFQLFRNLKLE----PNEITFVGLLSASTQLGSTSYGMQ 700
Query: 182 FF-KSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F P V L D+ G L+ + + ++ AW+ ++SA
Sbjct: 701 AHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVISAHGF 757
Query: 241 HGNVELGELAAAKLSDLSPGS 261
HG +GE A +LS S
Sbjct: 758 HG---MGEKAMELFKELSSNS 775
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 23/246 (9%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
MY+KC + +A +F+ ++++S +++ G+A +G EA + +M D I+PD A
Sbjct: 335 MYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIA 394
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQ-QVQTSLLHMYSKCGSIQKAREVFDR 118
T+ ++ S C DL +G+ + Y + +V S++ MY KCG +A +F
Sbjct: 395 TVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT 454
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAI-VYTSILLACSHSGLVE 177
T +DL W SMI+ ++ +G ++A NLF ++ E ++ +IL +C S
Sbjct: 455 TTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS---- 510
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
D L F KS+H C L ++G L A ++ M +W+ ++S
Sbjct: 511 DSLIFGKSVH-------------C---WLQKLGDLTSAFLRLETMSETRDLTSWNSVISG 554
Query: 238 CRIHGN 243
C G+
Sbjct: 555 CASSGH 560
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 3/172 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y + L S+ +FD K+++ W SMI Q+G A+ LF M+ D T
Sbjct: 131 FYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTT 190
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L SA + L K + GL D + +L+++Y+K ++ A VF +
Sbjct: 191 LLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHME 250
Query: 121 DKDLTIW-TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
+D+ W T M C A +G +++ F MT + D + ++ ++ ACS
Sbjct: 251 HRDIVSWNTIMTKCLA-NGHPRKSLQYFKSMTGSGQ-EADTVTFSCVISACS 300
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 171/303 (56%), Gaps = 3/303 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YA N+ AR F+ T K+ +SW S+IA Y ++ EA+DLF RM +PD TL
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT- 120
++LSA L +L G ++ + I + + D V +L+ MYS+CG I ++R +FD +
Sbjct: 413 TSLLSASTGLVNLRLGMQMHQ-IVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKL 471
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+++ W +MI YA HG +EA+NLF M I P I + S+L AC+H+GLV++
Sbjct: 472 KREVITWNAMIGGYAFHGNASEALNLFGSMK-SNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
F SM + I P ++HY+ L ++ GQ + A+ I MP + W LL ACRI
Sbjct: 531 AQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRI 590
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
+ NV L +AA +S L P SS YVL+ N+Y +G W EA +R ++ K + KE G S
Sbjct: 591 YNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSS 650
Query: 301 QVE 303
V+
Sbjct: 651 WVD 653
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 79/141 (56%), Gaps = 3/141 (2%)
Query: 1 MYAKCDNLTSARRIFD-LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY++C + +RRIFD + + +++W +MI GYA G+ +EAL+LF M I P
Sbjct: 452 MYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHI 511
Query: 60 TLATVLSACADLGSLSKGQ-EIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T +VL+ACA G + + + + + +Y ++ + +SL+++ S G ++A +
Sbjct: 512 TFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITS 571
Query: 119 VT-DKDLTIWTSMINCYAIHG 138
+ + D T+W ++++ I+
Sbjct: 572 MPFEPDKTVWGALLDACRIYN 592
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 46/260 (17%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YAK + A +F+ +N +SW++MI G+ Q+G A+ LFR+M D P A +
Sbjct: 146 YAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALV 205
Query: 62 ATVLS---------ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKA 112
A ++ GSL G+ E+ +Y Y +L+ Y + G ++ A
Sbjct: 206 AGLIKNERLSEAAWVLGQYGSLVSGR--EDLVYAY---------NTLIVGYGQRGQVEAA 254
Query: 113 REVFDRVTD---------------KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIM 157
R +FD++ D K++ W SMI Y G A LF +M ++R
Sbjct: 255 RCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM--KDR-- 310
Query: 158 PDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVD 217
D I + +++ H +ED F M + + VG ++LA
Sbjct: 311 -DTISWNTMIDGYVHVSRMEDAFALFSEMPNR-----DAHSWNMMVSGYASVGNVELARH 364
Query: 218 AIQGMPLDVQAQAWSCLLSA 237
+ P + +W+ +++A
Sbjct: 365 YFEKTP-EKHTVSWNSIIAA 383
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 47/182 (25%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
+ AR IF+ +N ++W +MI+GY + +A LF M + D+ T T++S
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV----VTWNTMISG 111
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSI---QKAREVFDRVTDKDL 124
Y CG I ++AR++FD + +D
Sbjct: 112 -----------------------------------YVSCGGIRFLEEARKLFDEMPSRDS 136
Query: 125 TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFK 184
W +MI+ YA + EA+ LF KM ER +A+ +++++ +G V+ + F+
Sbjct: 137 FSWNTMISGYAKNRRIGEALLLFEKMP--ER---NAVSWSAMITGFCQNGEVDSAVVLFR 191
Query: 185 SM 186
M
Sbjct: 192 KM 193
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 168/306 (54%), Gaps = 1/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YA +L +A +F ++++ W +MI+GY Q G E L ++ M + I PD T
Sbjct: 152 LYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYT 211
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A+V AC+ L L G+ + + + V ++L+ MY KC S VFD+++
Sbjct: 212 FASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLS 271
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+++ WTS+I+ Y HG +E + F KM EE P+ + + +L AC+H GLV+ G
Sbjct: 272 TRNVITWTSLISGYGYHGKVSEVLKCFEKMK-EEGCRPNPVTFLVVLTACNHGGLVDKGW 330
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F SM D+GI P +HY + D LGR G+L A + + P W LL ACRI
Sbjct: 331 EHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRI 390
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HGNV+L ELAA K +L P + G+YV+ AN Y S G + A +R ++ + K+ G S
Sbjct: 391 HGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYS 450
Query: 301 QVEVKA 306
Q+E++
Sbjct: 451 QIELQG 456
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 30 IAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGL 89
+ G +G EA+ L + + ++ + T A +L C +KG+ I +++ G
Sbjct: 83 LKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGF 139
Query: 90 DLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHK 149
L++ ++ LL +Y+ G +Q A +F + +DL W +MI+ Y G+ E + +++
Sbjct: 140 ALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYD 199
Query: 150 MTVEERIMPDAIVYTSILLACSHSGLVEDG 179
M + RI+PD + S+ ACS +E G
Sbjct: 200 MR-QNRIVPDQYTFASVFRACSALDRLEHG 228
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 170/306 (55%), Gaps = 2/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP-DGA 59
Y KC + SA R F N +SW+++I+GY Q EA+ F+ + + +
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF 388
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T ++ AC+ L + G ++ L Q +++L+ MYSKCG + A EVF+ +
Sbjct: 389 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESM 448
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+ D+ WT+ I+ +A +G +EA+ LF KM V + P+++ + ++L ACSH+GLVE G
Sbjct: 449 DNPDIVAWTAFISGHAYYGNASEALRLFEKM-VSCGMKPNSVTFIAVLTACSHAGLVEQG 507
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+M + +APT+ HY C+ D+ R G LD A+ ++ MP + A +W C LS C
Sbjct: 508 KHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCW 567
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
H N+ELGE+A +L L P + YVL NLYT GKW+EA M L++ + L KE
Sbjct: 568 THKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSC 627
Query: 300 SQVEVK 305
S ++ K
Sbjct: 628 SWIQEK 633
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 24/254 (9%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC L A+R+FD A K ++ T ++ GY Q+G +AL LF +V + D
Sbjct: 228 MYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFV 287
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ VL ACA L L+ G++I + GL+ + V T L+ Y KC S + A F +
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS--------- 171
+ + W+++I+ Y EA+ F + + + ++ YTSI ACS
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 172 --HSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ 229
H+ ++ L + +G + + Y+ + G LD A + + M +
Sbjct: 408 QVHADAIKRSL-----IGSQYGESALITMYS-------KCGCLDDANEVFESMD-NPDIV 454
Query: 230 AWSCLLSACRIHGN 243
AW+ +S +GN
Sbjct: 455 AWTAFISGHAYYGN 468
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 18/280 (6%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY +C +L A ++FD + N +S T+MI+ YA+ G +A+ LF M+ + +P +
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM 186
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
T+L + + +L G++I ++ GL + ++T +++MY KCG + A+ VFD++
Sbjct: 187 YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA 246
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K T ++ Y G +A+ LF + V E + D+ V++ +L AC+ + L
Sbjct: 247 VKKPVACTGLMVGYTQAGRARDALKLFVDL-VTEGVEWDSFVFSVVLKACASL----EEL 301
Query: 181 KFFKSMH---EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM--PLDVQAQAWSCLL 235
K +H G+ V T L D + + A A Q + P DV +WS ++
Sbjct: 302 NLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV---SWSAII 358
Query: 236 SACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSL 275
S G ++ + A + S S + +L + YTS+
Sbjct: 359 S-----GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSI 393
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 41 EALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLL 100
EA + + M + + + + AC +L SLS G+ + + + + + +Q +L
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 101 HMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDA 160
MY +C S++ A ++FD +++ + T+MI+ YA G+ ++A+ LF M P +
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 161 IVYTSIL 167
+ YT++L
Sbjct: 186 M-YTTLL 191
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 177/305 (58%), Gaps = 4/305 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGAT 60
YAK + A+ +FD ++++++ SM+AGY Q+ + EAL++F M + + + PD T
Sbjct: 293 YAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTT 352
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L VL A A LG LSK ++ YI L ++ +L+ MYSKCGSIQ A VF+ +
Sbjct: 353 LVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE 412
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE-RIMPDAIVYTSILLACSHSGLVEDG 179
+K + W +MI AIHG+G A ++ + +E + PD I + +L ACSHSGLV++G
Sbjct: 413 NKSIDHWNAMIGGLAIHGLGESAFDML--LQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
L F+ M I P ++HY C+ D+L R G ++LA + I+ MP++ W L+AC
Sbjct: 471 LLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACS 530
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
H E GEL A L + + SYVL++N+Y S G WK+ +R ++ +++ K G
Sbjct: 531 HHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGC 590
Query: 300 SQVEV 304
S +E+
Sbjct: 591 SWIEL 595
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 22/255 (8%)
Query: 2 YAKCDNLTSARRIFDLTAG--KNILSWTSMIAGYAQSGHPAE-ALDLFRRMVRTDIRPDG 58
Y KC + SAR +FDL KN++SW SMI+GYAQ+ + A LF M D+
Sbjct: 197 YVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDL---- 252
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQT--SLLHMYSKCGSIQKAREVF 116
+S + + K IE+ L+ + + V T +++ Y+K G + A+ +F
Sbjct: 253 ------ISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
D++ +D+ + SM+ Y + EA+ +F M E ++PD +L A + G +
Sbjct: 307 DQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 366
Query: 177 EDGLKF-FKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
+ + + F + + L D+ + G + A+ +G+ + W+ ++
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLG--VALIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMI 423
Query: 236 SACRIHGNVELGELA 250
IHG LGE A
Sbjct: 424 GGLAIHG---LGESA 435
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP-DGA 59
+Y KC L +R++FD ++ +S+ SMI GY + G A +LF D+ P +
Sbjct: 165 LYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELF------DLMPMEMK 218
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
L + S + S G +I ++ + D S++ Y K G I+ A+ +FD +
Sbjct: 219 NLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVM 278
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+D+ W +MI+ YA G + A LF +M D + Y S++ + +
Sbjct: 279 PRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR-----DVVAYNSMMAGYVQNKYHMEA 333
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVD 217
L+ F M ++ + P + + ++G+L A+D
Sbjct: 334 LEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAID 371
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
W ++I ++ P +AL L M+ + D +L+ VL AC+ LG + G +I ++
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAIN 145
GL D +Q L+ +Y KCG + +R++FDR+ +D + SMI+ Y G+ A
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 146 LFHKMTVEERIMPDAIVYTSILLACSH-SGLVEDGLKFFKSMHE 188
LF M +E M + I + S++ + S V+ K F M E
Sbjct: 209 LFDLMPME---MKNLISWNSMISGYAQTSDGVDIASKLFADMPE 249
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 89/220 (40%), Gaps = 56/220 (25%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC ++ A +F+ K+I W +MI G A G A D+ ++ R ++PD T
Sbjct: 394 MYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDIT 453
Query: 61 LATVLSACADLGSLSKG----------QEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQ 110
VL+AC+ G + +G +IE + YG +D + S+ GSI+
Sbjct: 454 FVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD---------ILSRSGSIE 504
Query: 111 KAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
A+ NL +M VE P+ +++ + L AC
Sbjct: 505 LAK-------------------------------NLIEEMPVE----PNDVIWRTFLTAC 529
Query: 171 SHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVG 210
SH E G K + G P+ Y L+++ G
Sbjct: 530 SHHKEFETGELVAKHLILQAGYNPS--SYVLLSNMYASFG 567
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 179/307 (58%), Gaps = 4/307 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y +C L+ A+ F K++++W ++I+ +S +EAL +F+R P+ T
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYT 315
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++++ACA++ +L+ GQ++ I+ G + + ++ +L+ MY+KCG+I ++ VF +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 121 DK-DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
D+ +L WTSM+ Y HG G EA+ LF KM V I PD IV+ ++L AC H+GLVE G
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKM-VSSGIRPDRIVFMAVLSACRHAGLVEKG 434
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
LK+F M ++GI P Y C+ DLLGR G++ A + ++ MP W +L AC+
Sbjct: 435 LKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACK 494
Query: 240 IHG-NVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
H N + LAA K+ +L P G+YV+++ +Y + GKW + +R ++ KE G
Sbjct: 495 AHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAG 554
Query: 299 RSQVEVK 305
S + V+
Sbjct: 555 MSWILVE 561
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACAD 70
AR +FD +++++WT+MI GYA S + A A + F MV+ P+ TL++VL +C +
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 71 LGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCG-SIQKAREVFDRVTDKDLTIWTS 129
+ L+ G + + G++ V ++++MY+ C +++ A +F + K+ WT+
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTT 183
Query: 130 MINCYAIHGMGNEAINLFHKMTVEE-RIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHE 188
+I + G G + ++ +M +E + P I +A S + D + K +H
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT-----IAVRASASI-DSVTTGKQIHA 237
Query: 189 DF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
G + + DL R G L A M D W+ L+S
Sbjct: 238 SVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWNTLIS 287
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 97 TSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERI 156
T+L+ Y + G +++AR +FD + D+D+ WT+MI YA A FH+M V++
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEM-VKQGT 107
Query: 157 MPDAIVYTSILLACSHSGLVEDG 179
P+ +S+L +C + ++ G
Sbjct: 108 SPNEFTLSSVLKSCRNMKVLAYG 130
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 178/306 (58%), Gaps = 4/306 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM-VRTDIRPDGA 59
MY KC+ L+ A R+F K+ +SW SMI+G EA+DLF M + I+PDG
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
L +VLSACA LG++ G+ + EYI G+ D + T+++ MY+KCG I+ A E+F+ +
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI 367
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
K++ W +++ AIHG G E++ F +M V+ P+ + + + L AC H+GLV++G
Sbjct: 368 RSKNVFTWNALLGGLAIHGHGLESLRYFEEM-VKLGFKPNLVTFLAALNACCHTGLVDEG 426
Query: 180 LKFFKSMH-EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
++F M ++ + P ++HY C+ DLL R G LD A++ ++ MP+ + +LSAC
Sbjct: 427 RRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSAC 486
Query: 239 RIHGNV-ELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKEC 297
+ G + EL + D+ SG YVL++N++ + +W + +R L+ K + K
Sbjct: 487 KNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVP 546
Query: 298 GRSQVE 303
G S +E
Sbjct: 547 GSSYIE 552
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 11/246 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y C +A ++F ++++SWT +I G+ ++G EALD F +M D+ P+ AT
Sbjct: 150 FYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLAT 206
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
VL + +G LS G+ I I + + +L+ MY KC + A VF +
Sbjct: 207 YVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELE 266
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD W SMI+ EAI+LF M I PD + TS+L AC+ G V+ G
Sbjct: 267 KKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG- 325
Query: 181 KFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+ +HE GI T + D+ + G ++ A++ G+ W+ LL
Sbjct: 326 ---RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR-SKNVFTWNALLGG 381
Query: 238 CRIHGN 243
IHG+
Sbjct: 382 LAIHGH 387
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 24 LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEY 83
S+ ++++ YA P + ++ V PD T V AC + +G++I
Sbjct: 72 FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGI 131
Query: 84 IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEA 143
+ G D VQ SL+H Y CG + A +VF + +D+ WT +I + G+ EA
Sbjct: 132 VTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 144 INLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++ F KM VE P+ Y +L++ G + G
Sbjct: 192 LDTFSKMDVE----PNLATYVCVLVSSGRVGCLSLG 223
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 170/303 (56%), Gaps = 1/303 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y L A+++F+L KN++SWT++I G++Q+G A+ + M+ ++P+ T+
Sbjct: 237 YVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTI 296
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
A VLSAC+ G+L G I YI G+ LD+ + T+L+ MY+KCG + A VF +
Sbjct: 297 AAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNH 356
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
KD+ WT+MI +A+HG ++AI F +M PD +V+ ++L AC +S V+ GL
Sbjct: 357 KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE-KPDEVVFLAVLTACLNSSEVDLGLN 415
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
FF SM D+ I PT+KHY + DLLGR G+L+ A + ++ MP++ W+ L AC+ H
Sbjct: 416 FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAH 475
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
E + L +L P GSY+ + + S G ++ R + + + G S
Sbjct: 476 KGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSY 535
Query: 302 VEV 304
+E+
Sbjct: 536 IEL 538
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC L A +F K+ILSWT+MI G+A G +A+ FR+M+ + +PD
Sbjct: 337 MYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVV 396
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLH------MYSKCGSIQKARE 114
VL+AC + + G + + LD ++ +L H + + G + +A E
Sbjct: 397 FLAVLTACLNSSEVDLGLN-----FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHE 451
Query: 115 VFDRVT-DKDLTIWTSMINCYAIH 137
+ + + + DLT W ++ H
Sbjct: 452 LVENMPINPDLTTWAALYRACKAH 475
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 27/248 (10%)
Query: 14 IFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGS 73
IF + +N ++I G ++ ++ F M+R ++PD T VL + + LG
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 74 LSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF----DRVTDKDLTIWTS 129
G+ + +D D V+ SL+ MY+K G ++ A +VF DR+ + + IW
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
+IN Y + A LF M ER ++ +++++ SG + + F+ M E
Sbjct: 202 LINGYCRAKDMHMATTLFRSMP--ER---NSGSWSTLIKGYVDSGELNRAKQLFELMPEK 256
Query: 190 FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM---PLDVQAQAWSCLLSAC-------- 238
V +T L + + G + A+ M L + +LSAC
Sbjct: 257 -----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGS 311
Query: 239 --RIHGNV 244
RIHG +
Sbjct: 312 GIRIHGYI 319
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 183/310 (59%), Gaps = 9/310 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC + AR +FD K+I++W++MI GYA + P E ++LF +M++ +++PD +
Sbjct: 256 LYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315
Query: 61 LATVLSACADLGSLSKGQE----IEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
+ LS+CA LG+L G+ I+ + +L L + +L+ MY+KCG++ + EVF
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFM----ANALIDMYAKCGAMARGFEVF 371
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
+ +KD+ I + I+ A +G + +F + T + I PD + +L C H+GL+
Sbjct: 372 KEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ-TEKLGISPDGSTFLGLLCGCVHAGLI 430
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
+DGL+FF ++ + + TV+HY C+ DL GR G LD A I MP+ A W LLS
Sbjct: 431 QDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490
Query: 237 ACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKE 296
CR+ + +L E +L L P ++G+YV ++N+Y+ G+W EA +R++++ K + K
Sbjct: 491 GCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKI 550
Query: 297 CGRSQVEVKA 306
G S +E++
Sbjct: 551 PGYSWIELEG 560
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y+ L A ++FD +++++WT++ +GY SG EA+DLF++MV ++PD
Sbjct: 155 IYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYF 214
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ VLSAC +G L G+ I +Y+ + + V+T+L+++Y+KCG ++KAR VFD +
Sbjct: 215 IVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMV 274
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+KD+ W++MI YA + E I LF +M ++E + PD L +C+ G ++ G
Sbjct: 275 EKDIVTWSTMIQGYASNSFPKEGIELFLQM-LQENLKPDQFSIVGFLSSCASLGALDLG 332
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 3/224 (1%)
Query: 14 IFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGS 73
+F T NI + S+I G+ + E LDLF + + + G T VL AC S
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 74 LSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINC 133
G ++ + G + D TSLL +YS G + A ++FD + D+ + WT++ +
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 134 YAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIA 193
Y G EAI+LF KM VE + PD+ +L AC H G ++ G K M E+ +
Sbjct: 187 YTTSGRHREAIDLFKKM-VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQ 244
Query: 194 PTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
T L +L + G+++ A M ++ WS ++
Sbjct: 245 KNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG 287
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 164/285 (57%), Gaps = 2/285 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK ++L+ AR F+ +N++SW +MI G+AQ+G EA+ LF +M+ +++PD T
Sbjct: 285 MYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELT 344
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A+VLS+CA ++ + ++++ + G V SL+ YS+ G++ +A F +
Sbjct: 345 FASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR 404
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ DL WTS+I A HG E++ +F M +++ PD I + +L ACSH GLV++GL
Sbjct: 405 EPDLVSWTSVIGALASHGFAEESLQMFESML--QKLQPDKITFLEVLSACSHGGLVQEGL 462
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ FK M E + I +HYTCL DLLGR G +D A D + MP + A + C I
Sbjct: 463 RCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNI 522
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMR 285
H E + A KL ++ P +Y +++N Y S G W +A ++R
Sbjct: 523 HEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLR 567
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQ----SGHPAE-ALDLFRRMVRTDIRP 56
Y K A ++FD +NI++W +I G Q + H A R++ TD+
Sbjct: 81 YTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSL 140
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
D + ++ C D ++ G ++ + GL+ TSL+H Y KCG I +AR VF
Sbjct: 141 DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVF 200
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKM-TVEERIMPDAIVYTSILLAC 170
+ V D+DL +W ++++ Y ++GM +EA L M + + R D ++S+L AC
Sbjct: 201 EAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 170/306 (55%), Gaps = 1/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y KC + S+ IF KN +SW S++A Y Q+ +A L+ R + +
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM 312
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+++VLSACA + L G+ I + ++ V ++L+ MY KCG I+ + + FD +
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE-RIMPDAIVYTSILLACSHSGLVEDG 179
+K+L S+I YA G + A+ LF +M P+ + + S+L ACS +G VE+G
Sbjct: 373 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+K F SM +GI P +HY+C+ D+LGR G ++ A + I+ MP+ W L +ACR
Sbjct: 433 MKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACR 492
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+HG +LG LAA L L P SG++VL++N + + G+W EA+ +R + G + K G
Sbjct: 493 MHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGY 552
Query: 300 SQVEVK 305
S + VK
Sbjct: 553 SWITVK 558
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+K D+ SAR + LT +N++SWTS+I+G AQ+GH + AL F M R + P+ T
Sbjct: 51 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 110
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A A L G++I G LD V S MY K AR++FD +
Sbjct: 111 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 170
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIM---PDAIVYTSILLACS 171
+++L W + I+ G EAI F +E R + P++I + + L ACS
Sbjct: 171 ERNLETWNAFISNSVTDGRPREAIEAF----IEFRRIDGHPNSITFCAFLNACS 220
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 15/283 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K AR++FD +N+ +W + I+ G P EA++ F R D P+ T
Sbjct: 152 MYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSIT 211
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L+AC+D L+ G ++ + G D D V L+ Y KC I+ + +F +
Sbjct: 212 FCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG 271
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K+ W S++ Y + +E ++ + + ++ + + +S+L AC +G+ GL
Sbjct: 272 TKNAVSWCSLVAAY-VQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMA--GL 326
Query: 181 KFFKSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+ +S+H + T+ + L D+ G+ G ++ + A MP + + L+
Sbjct: 327 ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGG 385
Query: 238 CRIHGNVELGELAAAKLSDLSP---GSSGSYVLMANLYTSLGK 277
G V ++A A +++P G + +Y+ +L ++ +
Sbjct: 386 YAHQGQV---DMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 182/304 (59%), Gaps = 3/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY +C N++ +R +F+ + ++++ W+SMI+GYA++G +E ++L +M + I + T
Sbjct: 296 MYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVT 355
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L ++SAC + LS + I G + +L+ MY+KCGS+ AREVF +T
Sbjct: 356 LLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT 415
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+KDL W+SMIN Y +HG G+EA+ +F M ++ D + + +IL AC+H+GLVE+
Sbjct: 416 EKDLVSWSSMINAYGLHGHGSEALEIFKGM-IKGGHEVDDMAFLAILSACNHAGLVEEAQ 474
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
F + + + T++HY C +LLGR G++D A + MP+ A+ WS LLSAC
Sbjct: 475 TIFTQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACET 533
Query: 241 HGNVEL-GELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
HG +++ G++ A +L P + +YVL++ ++T G + A +R ++ ++L K G
Sbjct: 534 HGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGF 593
Query: 300 SQVE 303
S++E
Sbjct: 594 SKIE 597
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 136/248 (54%), Gaps = 12/248 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K D+ +A +FD KN +SWT+MI+G + + +DLFR M R ++RP+ T
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 61 LATVLSACADL--GSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
L +VL AC +L GS S +EI + + +G D+++ + + MY +CG++ +R +F+
Sbjct: 254 LLSVLPACVELNYGS-SLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFET 312
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+D+ +W+SMI+ YA G +E +NL ++M +E I +++ +I+ AC++S L
Sbjct: 313 SKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR-KEGIEANSVTLLAIVSACTNSTL--- 368
Query: 179 GLKFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
L F ++H G + L D+ + G L A + + + +WS ++
Sbjct: 369 -LSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMI 426
Query: 236 SACRIHGN 243
+A +HG+
Sbjct: 427 NAYGLHGH 434
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK + R++FD ++ +S+ S+I Q G EA+ L + M P
Sbjct: 91 MYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSEL 150
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQV--QTSLLHMYSKCGSIQKAREVFDR 118
+A++L+ C +GS SK + + L + + V T+L+ MY K A VFD+
Sbjct: 151 VASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQ 210
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH----SG 174
+ K+ WT+MI+ + ++LF M E + P+ + S+L AC S
Sbjct: 211 MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQ-RENLRPNRVTLLSVLPACVELNYGSS 269
Query: 175 LVED--GLKFFKSMHED 189
LV++ G F H D
Sbjct: 270 LVKEIHGFSFRHGCHAD 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 7/211 (3%)
Query: 41 EALDLFRRMVRTDIRPDG--ATLATVLSACA-DLGSLSKGQEIEEYIYLYGLDLDQQVQT 97
EAL L++ + + + +G A L +V+ ACA G ++ G D D V
Sbjct: 28 EALRLYKLKIHS-LGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSN 86
Query: 98 SLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIM 157
SL+ MY+K R+VFD + +D + S+IN G+ EA+ L +M I
Sbjct: 87 SLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI- 145
Query: 158 PDAIVYTSILLACSHSGLVEDGLKFFKSM-HEDFGIAPTVKHYTCLADLLGRVGQLDLAV 216
P + + S+L C+ G + F ++ D + +V T L D+ + A
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 217 DAIQGMPLDVQAQAWSCLLSACRIHGNVELG 247
M + + +W+ ++S C + N E+G
Sbjct: 206 HVFDQMEVKNEV-SWTAMISGCVANQNYEMG 235
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 166/309 (53%), Gaps = 5/309 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K L A IF+ +++ +W S++ + G L LF RM+ + IRPD T
Sbjct: 306 MYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVT 365
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGL----DLDQQVQTSLLHMYSKCGSIQKAREVF 116
L TVL C L SL +G+EI Y+ + GL ++ + SL+ MY KCG ++ AR VF
Sbjct: 366 LTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVF 425
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
D + KD W MIN Y + G A+++F M + PD I + +L ACSHSG +
Sbjct: 426 DSMRVKDSASWNIMINGYGVQSCGELALDMFSCM-CRAGVKPDEITFVGLLQACSHSGFL 484
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
+G F M + I PT HY C+ D+LGR +L+ A + P+ W +LS
Sbjct: 485 NEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILS 544
Query: 237 ACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKE 296
+CR+HGN +L +A +L +L P G YVLM+N+Y GK++E +R+ + + + K
Sbjct: 545 SCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKT 604
Query: 297 CGRSQVEVK 305
G S + +K
Sbjct: 605 PGCSWIVLK 613
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 103/188 (54%), Gaps = 8/188 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + A +F + +++ + ++I+G+ +G P +A++ +R M I PD T
Sbjct: 105 MYAKCGLMRRAVLVFG-GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYT 163
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++L +D LS +++ + G D D V + L+ YSK S++ A++VFD +
Sbjct: 164 FPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELP 222
Query: 121 DKDLTI-WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
D+D ++ W +++N Y+ +A+ +F KM EE + TS+L A + SG +++G
Sbjct: 223 DRDDSVLWNALVNGYSQIFRFEDALLVFSKMR-EEGVGVSRHTITSVLSAFTVSGDIDNG 281
Query: 180 LKFFKSMH 187
+S+H
Sbjct: 282 ----RSIH 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 25/261 (9%)
Query: 2 YAKCDNLTSARRIFD-LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y+K ++ A+++FD L + + W +++ GY+Q +AL +F +M + T
Sbjct: 205 YSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHT 264
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +VLSA G + G+ I G D V +L+ MY K +++A +F+ +
Sbjct: 265 ITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD 324
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS--------- 171
++DL W S++ + G + + LF +M I PD + T++L C
Sbjct: 325 ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG-IRPDIVTLTTVLPTCGRLASLRQGR 383
Query: 172 --HSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ 229
H ++ GL KS +E + L D+ + G L A M + A
Sbjct: 384 EIHGYMIVSGLLNRKSSNEFI--------HNSLMDMYVKCGDLRDARMVFDSMRVKDSA- 434
Query: 230 AWSCLLSACRIHGNVELGELA 250
+W+ +++ +G GELA
Sbjct: 435 SWNIMING---YGVQSCGELA 452
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYG-LDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
AT L CA GQ+I ++ G LD + TSL++MY+KCG +++A VF
Sbjct: 61 ATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG 120
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSIL 167
+++D+ + ++I+ + ++G +A+ + +M I+PD + S+L
Sbjct: 121 G-SERDVFGYNALISGFVVNGSPLDAMETYREMRANG-ILPDKYTFPSLL 168
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 172/307 (56%), Gaps = 2/307 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
YA C + +R++FD + + WT++++GY+ + +AL +F M+R I P+ +T
Sbjct: 269 FYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQST 328
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A+ L++C+ LG+L G+E+ GL+ D V SL+ MYS G++ A VF ++
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF 388
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K + W S+I A HG G A +F +M + PD I +T +L ACSH G +E G
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQM-IRLNKEPDEITFTGLLSACSHCGFLEKGR 447
Query: 181 KFFKSMHEDFG-IAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
K F M I ++HYTC+ D+LGR G+L A + I+ M + W LLSACR
Sbjct: 448 KLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACR 507
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+H +V+ GE AAA + +L SS +YVL++N+Y S G+W +R + ++K+ G
Sbjct: 508 MHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGS 567
Query: 300 SQVEVKA 306
S V ++
Sbjct: 568 SWVVIRG 574
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 100/186 (53%), Gaps = 5/186 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + + A ++F GKN++SWT+MI G Q+ EALDLF+ M+R I+
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
V++ACA+ + G ++ I G ++ V SL+ Y+ C I +R+VFD
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVH 288
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+ + +WT++++ Y+++ +A+++F M + I+P+ + S L +CS G ++ G
Sbjct: 289 EQVAVWTALLSGYSLNKKHEDALSIFSGM-LRNSILPNQSTFASGLNSCSALGTLDWG-- 345
Query: 182 FFKSMH 187
K MH
Sbjct: 346 --KEMH 349
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 57/242 (23%)
Query: 5 CDNLTS-----ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
C++L S AR +F+ ++ +T MI GY +S +AL+LF M D+
Sbjct: 43 CNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV----V 98
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ +++S C + CG + A ++FD +
Sbjct: 99 SWNSMISGCVE-----------------------------------CGDMNTAVKLFDEM 123
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++ + WT+M+N G ++A LF++M V+ D + S++ G V+D
Sbjct: 124 PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDA 178
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM---PLDVQAQAWSCLLS 236
LK FK M I+ T C D R G+ A+D + M + ++ ++C+++
Sbjct: 179 LKLFKQMPGKNVISWTT--MICGLDQNERSGE---ALDLFKNMLRCCIKSTSRPFTCVIT 233
Query: 237 AC 238
AC
Sbjct: 234 AC 235
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 105/243 (43%), Gaps = 25/243 (10%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + + L A +FD ++++SW SMI+G + G A+ LF M + +
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSW 131
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDL-DQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+++ C G + + + + Y + + D S++H Y + G + A ++F ++
Sbjct: 132 TAMVNGCFRSGKVDQAERL-----FYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMP 186
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS-----HSGL 175
K++ WT+MI + EA++LF M + I + +T ++ AC+ H G+
Sbjct: 187 GKNVISWTTMICGLDQNERSGEALDLFKNM-LRCCIKSTSRPFTCVITACANAPAFHMGI 245
Query: 176 VEDGLKF-FKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCL 234
GL ++E++ A + Y R+G D + Q W+ L
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCK----RIGDSRKVFDE----KVHEQVAVWTAL 297
Query: 235 LSA 237
LS
Sbjct: 298 LSG 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 19/163 (11%)
Query: 101 HMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDA 160
H+ S+ I +AREVF++V ++++T MI Y +A+NLF +M V D
Sbjct: 45 HLLSR--RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR-----DV 97
Query: 161 IVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQ 220
+ + S++ C G + +K F M E +V +T + + R G++D A
Sbjct: 98 VSWNSMISGCVECGDMNTAVKLFDEMPER-----SVVSWTAMVNGCFRSGKVDQAERLFY 152
Query: 221 GMPLDVQAQAWSCLLSACRIHGNVELGEL-AAAKLSDLSPGSS 262
MP+ A AW+ + +HG ++ G++ A KL PG +
Sbjct: 153 QMPVKDTA-AWNSM-----VHGYLQFGKVDDALKLFKQMPGKN 189
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 204 bits (519), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 181/307 (58%), Gaps = 6/307 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAK + L A++ F+ + I+SW +MI+G+AQ+G EAL +F + P+ T
Sbjct: 416 LYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA-AETMPNEYT 474
Query: 61 LATVLSACA---DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
+VL+A A D+ S+ +GQ ++ GL+ V ++LL MY+K G+I ++ +VF+
Sbjct: 475 FGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFN 533
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
++ K+ +WTS+I+ Y+ HG +NLFHKM ++E + PD + + S+L AC+ G+V+
Sbjct: 534 EMSQKNQFVWTSIISAYSSHGDFETVMNLFHKM-IKENVAPDLVTFLSVLTACNRKGMVD 592
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
G + F M E + + P+ +HY+C+ D+LGR G+L A + + +P +L +
Sbjct: 593 KGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGS 652
Query: 238 CRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKEC 297
CR+HGNV++G A ++ P SGSYV M N+Y +W +A +R + K + KE
Sbjct: 653 CRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEA 712
Query: 298 GRSQVEV 304
G S ++V
Sbjct: 713 GFSWIDV 719
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 100/182 (54%), Gaps = 7/182 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSG-HPAEALDLFRRMVRTDIRPDGA 59
MY++ + ARR+FD + K+++SW S+++G +Q G EA+ +FR M+R + D
Sbjct: 218 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHV 277
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ +V++ C L ++I G + +V L+ YSKCG ++ + VF ++
Sbjct: 278 SFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQM 337
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+++++ WT+MI+ ++A+++F M + + P+ + + ++ A + +++G
Sbjct: 338 SERNVVSWTTMISSNK-----DDAVSIFLNMRF-DGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 180 LK 181
LK
Sbjct: 392 LK 393
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 9/188 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K +A IF+ +++SW ++++G+ + AL+ RM + D T
Sbjct: 120 MYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFT 176
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+T LS C G +++ + GL+ D V S + MYS+ GS + AR VFD ++
Sbjct: 177 YSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS 236
Query: 121 DKDLTIWTSMINCYAIHG-MGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
KD+ W S+++ + G G EA+ +F M + E + D + +TS++ C H E
Sbjct: 237 FKDMISWNSLLSGLSQEGTFGFEAVVIFRDM-MREGVELDHVSFTSVITTCCH----ETD 291
Query: 180 LKFFKSMH 187
LK + +H
Sbjct: 292 LKLARQIH 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 119/257 (46%), Gaps = 33/257 (12%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+KC L + + +F + +N++SWT+MI S + +A+ +F M + P+ T
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTF 375
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+++A + +G +I G + V S + +Y+K +++ A++ F+ +T
Sbjct: 376 VGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITF 435
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS---------- 171
+++ W +MI+ +A +G +EA+ +F ++ MP+ + S+L A +
Sbjct: 436 REIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 172 ---HSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQA 228
H+ L++ GL P V + L D+ + G +D + M Q
Sbjct: 494 QRCHAHLLKLGLN----------SCPVVS--SALLDMYAKRGNIDESEKVFNEMSQKNQF 541
Query: 229 QAWSCLLSACRIHGNVE 245
W+ ++SA HG+ E
Sbjct: 542 -VWTSIISAYSSHGDFE 557
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 10/164 (6%)
Query: 11 ARRIFDLTAGKN-ILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI---RPDGATLATVLS 66
A ++FD ++ +N S I+ + PA AL +F+ ++ D TL L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
AC G L +G +I + G V +++ MY K G A +F+ + D D+
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 127 WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
W ++++ + + + A+N +M ++ DA Y++ L C
Sbjct: 145 WNTILSGFDDNQI---ALNFVVRMK-SAGVVFDAFTYSTALSFC 184
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 181/335 (54%), Gaps = 34/335 (10%)
Query: 2 YAKCDNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGH---------------------- 38
YAKC N+ A +IF L+ + ++S+ S+++GY SG
Sbjct: 480 YAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLM 539
Query: 39 ---------PAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGL 89
P EA+ +FR + +RP+ T+ +L CA L SL ++ YI GL
Sbjct: 540 VRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL 599
Query: 90 DLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHK 149
D +++ +LL +Y+KCGS++ A VF +DL ++T+M+ YA+HG G EA+ ++
Sbjct: 600 G-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSH 658
Query: 150 MTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRV 209
MT E I PD + T++L AC H+GL++DGL+ + S+ G+ PT++ Y C DL+ R
Sbjct: 659 MT-ESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARG 717
Query: 210 GQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMA 269
G+LD A + MP++ A W LL AC + ++LG A L +G++VL++
Sbjct: 718 GRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLIS 777
Query: 270 NLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEV 304
N+Y + KW+ +RNL+ KE+ K G S +EV
Sbjct: 778 NMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEV 812
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 5/177 (2%)
Query: 1 MYAKCDNL-TSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MYAK + A FD A K+++SW ++IAG++++ A+A F M++ P+ A
Sbjct: 166 MYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYA 225
Query: 60 TLATVLSACADLG---SLSKGQEIEEYIYLYG-LDLDQQVQTSLLHMYSKCGSIQKAREV 115
T+A VL CA + + G++I Y+ L V SL+ Y + G I++A +
Sbjct: 226 TIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASL 285
Query: 116 FDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
F R+ KDL W +I YA + +A LFH + + + PD++ SIL C+
Sbjct: 286 FTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQ 342
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMV-RTDIRPDGA 59
Y + + A +F K+++SW +IAGYA + +A LF +V + D+ PD
Sbjct: 272 FYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSV 331
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDL-DQQVQTSLLHMYSKCGSIQKAREVFDR 118
T+ ++L CA L L+ G+EI YI + L D V +L+ Y++ G A F
Sbjct: 332 TIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSL 391
Query: 119 VTDKDLTIWTSMINCYA 135
++ KD+ W ++++ +A
Sbjct: 392 MSTKDIISWNAILDAFA 408
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
MYAKC + +++F + + W ++ G + S E + F+ M D +P
Sbjct: 65 MYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSV 123
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSI-QKAREVFDR 118
T A VL C LG G+ + YI GL+ D V +L+ MY+K G I A FD
Sbjct: 124 TFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDG 183
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
+ DKD+ W ++I ++ + M +A F M ++E P+ ++L C+
Sbjct: 184 IADKDVVSWNAIIAGFSENNMMADAFRSFCLM-LKEPTEPNYATIANVLPVCA 235
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC +L A +F A ++++ +T+M+AGYA G EAL ++ M ++I+PD
Sbjct: 611 VYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVF 670
Query: 61 LATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ T+L+AC G + G +I + I ++G+ + + + ++ G + A ++
Sbjct: 671 ITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQM 730
Query: 120 -TDKDLTIWTSMI 131
+ + IW +++
Sbjct: 731 PVEPNANIWGTLL 743
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 38/208 (18%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
YA+ + ++A F L + K+I+SW +++ +A S + L+L ++ I D T
Sbjct: 375 FYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVT 434
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ---VQTSLLHMYSKCGSIQKAREVFD 117
+ ++L C ++ + K +E+ Y GL D++ + +LL Y+KCG+++ A ++F
Sbjct: 435 ILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFL 494
Query: 118 RVTDK--------------------------------DLTIWTSMINCYAIHGMGNEAIN 145
++++ DLT W+ M+ YA NEAI
Sbjct: 495 GLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIG 554
Query: 146 LFHKMTVEERIM-PDAIVYTSILLACSH 172
+F + ++ R M P+ + ++L C+
Sbjct: 555 VFRE--IQARGMRPNTVTIMNLLPVCAQ 580
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
D V+ ACA + L+ G+ + ++ G +V S+L+MY+KC + +++F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
++ D +W ++ ++ G E + F M + P ++ + +L C G
Sbjct: 80 RQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 177 EDGLKFFKSMH 187
+G KSMH
Sbjct: 139 YNG----KSMH 145
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 177/304 (58%), Gaps = 3/304 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+K ++ SA +F+ +++++W SM+ G++Q+G+ EA+ LF M + + + T
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVT 507
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
V+ AC+ +GSL KG+ + + + GL D T+L+ MY+KCG + A VF ++
Sbjct: 508 FLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMS 566
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ + W+SMIN Y +HG AI+ F++M VE P+ +V+ ++L AC HSG VE+G
Sbjct: 567 SRSIVSWSSMINAYGMHGRIGSAISTFNQM-VESGTKPNEVVFMNVLSACGHSGSVEEG- 624
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
K++ ++ + FG++P +H+ C DLL R G L A I+ MP A W L++ CRI
Sbjct: 625 KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRI 684
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
H +++ + LSD+ +G Y L++N+Y G+W+E +R+ + L K G S
Sbjct: 685 HQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYS 744
Query: 301 QVEV 304
+E+
Sbjct: 745 AIEI 748
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 108/180 (60%), Gaps = 2/180 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC +L S+ RIF+ A KN +SWT+MI+ Y + +AL F M+++ I P+ T
Sbjct: 246 MYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVT 305
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLD-QQVQTSLLHMYSKCGSIQKAREVFDRV 119
L +VLS+C +G + +G+ + + LD + + + +L+ +Y++CG + V V
Sbjct: 306 LYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVV 365
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+D+++ W S+I+ YA GM +A+ LF +M V +RI PDA S + AC ++GLV G
Sbjct: 366 SDRNIVAWNSLISLYAHRGMVIQALGLFRQM-VTQRIKPDAFTLASSISACENAGLVPLG 424
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 144/278 (51%), Gaps = 11/278 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YA+C L+ + + + +NI++W S+I+ YA G +AL LFR+MV I+PD T
Sbjct: 348 LYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
LA+ +SAC + G + G++I ++ + D+ VQ SL+ MYSK GS+ A VF+++
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ + W SM+ ++ +G EAI+LF M + + + + +++ ACS G +E G
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYM-YHSYLEMNEVTFLAVIQACSSIGSLEKG- 524
Query: 181 KFFKSMHEDFGIAPTVKHY--TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
K +H I+ + T L D+ + G L+ A + M S +++A
Sbjct: 525 ---KWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSW-SSMINAY 580
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLG 276
+HG + G + + G+ + V+ N+ ++ G
Sbjct: 581 GMHGRI--GSAISTFNQMVESGTKPNEVVFMNVLSACG 616
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 127/241 (52%), Gaps = 12/241 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY + NL+ A ++FD +++++W+++++ ++G +AL +F+ MV + PD T
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +V+ CA+LG L + + I DLD+ + SLL MYSKCG + + +F+++
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K+ WT+MI+ Y +A+ F +M ++ I P+ + S+L +C GL+ +G
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEM-IKSGIEPNLVTLYSVLSSCGLIGLIREG- 322
Query: 181 KFFKSMHEDFGIA----PTVKHYT-CLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
KS+H F + P + + L +L G+L + + + D AW+ L+
Sbjct: 323 ---KSVH-GFAVRRELDPNYESLSLALVELYAECGKLS-DCETVLRVVSDRNIVAWNSLI 377
Query: 236 S 236
S
Sbjct: 378 S 378
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 42 ALDLFRRMVRTDIRPDGATLATVLSACADLGS---LSKGQEIEEYIYLYGLDLDQQVQTS 98
A+DL+ R+V + +VL ACA GS LS G ++ I G+D D ++TS
Sbjct: 84 AIDLYHRLVSETTQISKFVFPSVLRACA--GSREHLSVGGKVHGRIIKGGVDDDAVIETS 141
Query: 99 LLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMP 158
LL MY + G++ A +VFD + +DL W+++++ +G +A+ +F K V++ + P
Sbjct: 142 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMF-KCMVDDGVEP 200
Query: 159 DAIVYTSILLACSHSGLVEDGLKFFKSMH 187
DA+ S++ C+ G L+ +S+H
Sbjct: 201 DAVTMISVVEGCAELGC----LRIARSVH 225
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 97 TSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERI 156
T L+ Y+ GS +R VF+ D ++ +I C + + AI+L+H++ V E
Sbjct: 38 TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL-VSETT 96
Query: 157 MPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQLD 213
V+ S+L AC+ S + L +H G+ T L + G+ G L
Sbjct: 97 QISKFVFPSVLRACAGS---REHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLS 153
Query: 214 LAVDAIQGMPLDVQAQAWSCLLSACRIHGNV 244
A GMP+ AWS L+S+C +G V
Sbjct: 154 DAEKVFDGMPVR-DLVAWSTLVSSCLENGEV 183
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 159/281 (56%), Gaps = 1/281 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC ++ AR F+ K ++W ++IAGYA G+ EAL L M + + D T
Sbjct: 268 MYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFT 327
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L+ ++ L L ++ + G + + T+L+ YSK G + AR VFD++
Sbjct: 328 LSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP 387
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K++ W +++ YA HG G +A+ LF KM + + P+ + + ++L AC++SGL E G
Sbjct: 388 RKNIISWNALMGGYANHGRGTDAVKLFEKM-IAANVAPNHVTFLAVLSACAYSGLSEQGW 446
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F SM E GI P HY C+ +LLGR G LD A+ I+ PL W+ LL+ACR+
Sbjct: 447 EIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRM 506
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEA 281
N+ELG + A KL + P G+YV+M N+Y S+GK EA
Sbjct: 507 QENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEA 547
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 9/245 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
M+ KC + ARR+FD +N+ S+ S+I+G+ G+ EA +LF+ M + T
Sbjct: 167 MHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHT 226
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A +L A A LGS+ G+++ G+ + V L+ MYSKCG I+ AR F+ +
Sbjct: 227 FAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMP 286
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K W ++I YA+HG EA+ L + M + + D SI++ S + L + L
Sbjct: 287 EKTTVAWNNVIAGYALHGYSEEALCLLYDMR-DSGVSIDQFT-LSIMIRIS-TKLAK--L 341
Query: 181 KFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+ K H G + T L D + G++D A +P +W+ L+
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRK-NIISWNALMGG 400
Query: 238 CRIHG 242
HG
Sbjct: 401 YANHG 405
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 41 EALDLFRRM-VRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSL 99
EA +LF + +R + +T ++ AC L S+ + + ++ G + +Q + +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 100 LHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPD 159
L M+ KCG I AR +FD + +++L + S+I+ + G EA LF KM EE + D
Sbjct: 165 LLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELF-KMMWEE--LSD 221
Query: 160 AIVYTSILLACSHSGLVEDGLKFFKSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAV 216
+T ++ + +GL + K +H G+ L D+ + G ++ A
Sbjct: 222 CETHTFAVMLRASAGL--GSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDAR 279
Query: 217 DAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
A + MP + AW+ +++ +HG E
Sbjct: 280 CAFECMP-EKTTVAWNNVIAGYALHGYSE 307
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 201 bits (512), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 156/258 (60%), Gaps = 1/258 (0%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+++SWTS+I+G + +A D F++M+ + P+ AT+ T+L AC L + G+EI
Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIH 311
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGN 141
Y + GL+ V+++LL MY KCG I +A +F + K + SMI CYA HG+ +
Sbjct: 312 GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLAD 371
Query: 142 EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTC 201
+A+ LF +M + D + +T+IL ACSH+GL + G F M + I P ++HY C
Sbjct: 372 KAVELFDQMEATGEKL-DHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYAC 430
Query: 202 LADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGS 261
+ DLLGR G+L A + I+ M ++ W LL+ACR HGN+EL +AA L++L P +
Sbjct: 431 MVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPEN 490
Query: 262 SGSYVLMANLYTSLGKWK 279
SG+ +L+ +LY + G W+
Sbjct: 491 SGNGLLLTSLYANAGSWE 508
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 2/222 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y +C + AR++FD ++I MI A++G+ E+LD FR M + ++ D
Sbjct: 60 FYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFI 119
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ ++L A +L G+ I + + + D + +SL+ MYSK G + AR+VF +
Sbjct: 120 VPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG 179
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++DL ++ +MI+ YA + +EA+NL M + I PD I + +++ SH E
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLG-IKPDVITWNALISGFSHMRNEEKVS 238
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
+ + M D G P V +T + L Q + A DA + M
Sbjct: 239 EILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQM 279
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 168/291 (57%), Gaps = 10/291 (3%)
Query: 19 AGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGATLATVLSACADLGSLSKG 77
+ ++SWT++I GYA+ P EA+ LF RMV D I+P+ T+ +L A +LG L
Sbjct: 216 PNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMC 275
Query: 78 QEIEEYIYLYGL-DLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD--KDLTIWTSMINCY 134
+ Y+ G D +V SL+ Y+KCG IQ A + F + + K+L WT+MI+ +
Sbjct: 276 GSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAF 335
Query: 135 AIHGMGNEAINLFHKMTVEERI--MPDAIVYTSILLACSHSGLVEDG-LKFFKSMHEDFG 191
AIHGMG EA+++F M ER+ P+ + S+L ACSH GL E+ L+FF +M ++
Sbjct: 336 AIHGMGKEAVSMFKDM---ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 192 IAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAA 251
I P VKHY CL D+L R G+L+ A +P++ +A W LL AC ++ + EL E
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVT 452
Query: 252 AKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQV 302
KL +L G YVLM+N++ G++ +A R +D + + K G SQV
Sbjct: 453 RKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 166/305 (54%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC +L+S++ +F+ +NI++W +M+A A GH E L L +M + D +
Sbjct: 508 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 567
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ LSA A L L +GQ++ G + D + + MYSKCG I + ++
Sbjct: 568 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV 627
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++ L W +I+ HG E FH+M +E I P + + S+L ACSH GLV+ GL
Sbjct: 628 NRSLPSWNILISALGRHGYFEEVCATFHEM-LEMGIKPGHVTFVSLLTACSHGGLVDKGL 686
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++ + DFG+ P ++H C+ DLLGR G+L A I MP+ W LL++C+I
Sbjct: 687 AYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKI 746
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HGN++ G AA LS L P YVL +N++ + G+W++ +R + K + K+ S
Sbjct: 747 HGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACS 806
Query: 301 QVEVK 305
V++K
Sbjct: 807 WVKLK 811
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 137/277 (49%), Gaps = 10/277 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K ++ +RR+ +++++W ++I GYA+ P +AL F+ M + + T
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 465
Query: 61 LATVLSACADLGSL-SKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ +VLSAC G L +G+ + YI G + D+ V+ SL+ MY+KCG + ++++F+ +
Sbjct: 466 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 525
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++++ W +M+ A HG G E + L KM + D ++ L A + ++E+G
Sbjct: 526 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEG 584
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ--AWSCLLSA 237
+ + G + AD+ + G++ + ++ +P V +W+ L+SA
Sbjct: 585 QQ-LHGLAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLPPSVNRSLPSWNILISA 640
Query: 238 CRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTS 274
HG E E+ A L G +V +L T+
Sbjct: 641 LGRHGYFE--EVCATFHEMLEMGIKPGHVTFVSLLTA 675
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 127/249 (51%), Gaps = 10/249 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K + AR +FD+ +N +SW +M++G + G E ++ FR+M I+P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 61 LATVLSACADLGSLSK-GQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+A++++AC GS+ + G ++ ++ GL D V T++LH+Y G + +R+VF+ +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED- 178
D+++ WTS++ Y+ G E I+++ M E + S+ L S GL++D
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNE----NSMSLVISSCGLLKDE 176
Query: 179 --GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
G + + + G+ + L +LG +G +D A M + +W+ + +
Sbjct: 177 SLGRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAA 234
Query: 237 ACRIHGNVE 245
A +G++E
Sbjct: 235 AYAQNGHIE 243
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 81/143 (56%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
++ +R++F+ +N++SWTS++ GY+ G P E +D+++ M + + +++ V+S+
Sbjct: 110 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 169
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
C L S G++I + GL+ V+ SL+ M G++ A +FD+++++D W
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 229
Query: 128 TSMINCYAIHGMGNEAINLFHKM 150
S+ YA +G E+ +F M
Sbjct: 230 NSIAAAYAQNGHIEESFRIFSLM 252
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 10/249 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYA A +F K+++SW S++A + G +AL L M+ + + T
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 364
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ L+AC KG+ + + + GL +Q + +L+ MY K G + ++R V ++
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG-LVEDG 179
+D+ W ++I YA ++A+ F M VE + + I S+L AC G L+E G
Sbjct: 425 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG-VSSNYITVVSVLSACLLPGDLLERG 483
Query: 180 LKFFKSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
K +H G L + + G L + D G+ + W+ +L+
Sbjct: 484 ----KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLA 538
Query: 237 ACRIHGNVE 245
A HG+ E
Sbjct: 539 ANAHHGHGE 547
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
M N+ A IFD + ++ +SW S+ A YAQ+GH E+ +F M R + T
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 263
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++T+LS + G+ I + G D V +LL MY+ G +A VF ++
Sbjct: 264 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KDL W S++ + G +A+ L M + + + + +TS L AC E G
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV-NYVTFTSALAACFTPDFFEKG- 381
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
+ + G+ L + G++G++ + + MP AW+ L+
Sbjct: 382 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALI 435
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 166/305 (54%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC +L+S++ +F+ +NI++W +M+A A GH E L L +M + D +
Sbjct: 491 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 550
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ LSA A L L +GQ++ G + D + + MYSKCG I + ++
Sbjct: 551 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV 610
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++ L W +I+ HG E FH+M +E I P + + S+L ACSH GLV+ GL
Sbjct: 611 NRSLPSWNILISALGRHGYFEEVCATFHEM-LEMGIKPGHVTFVSLLTACSHGGLVDKGL 669
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++ + DFG+ P ++H C+ DLLGR G+L A I MP+ W LL++C+I
Sbjct: 670 AYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKI 729
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HGN++ G AA LS L P YVL +N++ + G+W++ +R + K + K+ S
Sbjct: 730 HGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACS 789
Query: 301 QVEVK 305
V++K
Sbjct: 790 WVKLK 794
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 137/277 (49%), Gaps = 10/277 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K ++ +RR+ +++++W ++I GYA+ P +AL F+ M + + T
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 448
Query: 61 LATVLSACADLGSL-SKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ +VLSAC G L +G+ + YI G + D+ V+ SL+ MY+KCG + ++++F+ +
Sbjct: 449 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 508
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++++ W +M+ A HG G E + L KM + D ++ L A + ++E+G
Sbjct: 509 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEG 567
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ--AWSCLLSA 237
+ + G + AD+ + G++ + ++ +P V +W+ L+SA
Sbjct: 568 QQ-LHGLAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLPPSVNRSLPSWNILISA 623
Query: 238 CRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTS 274
HG E E+ A L G +V +L T+
Sbjct: 624 LGRHGYFE--EVCATFHEMLEMGIKPGHVTFVSLLTA 658
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 117/229 (51%), Gaps = 10/229 (4%)
Query: 21 KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSK-GQE 79
+N +SW +M++G + G E ++ FR+M I+P +A++++AC GS+ + G +
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 80 IEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGM 139
+ ++ GL D V T++LH+Y G + +R+VF+ + D+++ WTS++ Y+ G
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123
Query: 140 GNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED---GLKFFKSMHEDFGIAPTV 196
E I+++ M E + S+ L S GL++D G + + + G+ +
Sbjct: 124 PEEVIDIYKGMRGEGVGCNE----NSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKL 178
Query: 197 KHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
L +LG +G +D A M + +W+ + +A +G++E
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIE 226
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 81/143 (56%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
++ +R++F+ +N++SWTS++ GY+ G P E +D+++ M + + +++ V+S+
Sbjct: 93 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 152
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
C L S G++I + GL+ V+ SL+ M G++ A +FD+++++D W
Sbjct: 153 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 212
Query: 128 TSMINCYAIHGMGNEAINLFHKM 150
S+ YA +G E+ +F M
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLM 235
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 10/249 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYA A +F K+++SW S++A + G +AL L M+ + + T
Sbjct: 288 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 347
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ L+AC KG+ + + + GL +Q + +L+ MY K G + ++R V ++
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG-LVEDG 179
+D+ W ++I YA ++A+ F M VE + + I S+L AC G L+E G
Sbjct: 408 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG-VSSNYITVVSVLSACLLPGDLLERG 466
Query: 180 LKFFKSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
K +H G L + + G L + D G+ + W+ +L+
Sbjct: 467 ----KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLA 521
Query: 237 ACRIHGNVE 245
A HG+ E
Sbjct: 522 ANAHHGHGE 530
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
M N+ A IFD + ++ +SW S+ A YAQ+GH E+ +F M R + T
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++T+LS + G+ I + G D V +LL MY+ G +A VF ++
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KDL W S++ + G +A+ L M + + + + +TS L AC E G
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV-NYVTFTSALAACFTPDFFEKG- 364
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
+ + G+ L + G++G++ + + MP AW+ L+
Sbjct: 365 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALI 418
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 201 bits (510), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 162/297 (54%), Gaps = 3/297 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y K +AR++FD + + SW ++I G +G EA+++F M R+ + PD T
Sbjct: 161 LYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFT 220
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLD--LDQQVQTSLLHMYSKCGSIQKAREVFDR 118
+ +V ++C LG LS ++ + + + D + SL+ MY KCG + A +F+
Sbjct: 221 MVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEE 280
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ +++ W+SMI YA +G EA+ F +M E + P+ I + +L AC H GLVE+
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMR-EFGVRPNKITFVGVLSACVHGGLVEE 339
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
G +F M +F + P + HY C+ DLL R GQL A ++ MP+ W CL+ C
Sbjct: 340 GKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGC 399
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVK 295
G+VE+ E A + +L P + G YV++AN+Y G WK+ +R L+ K++ K
Sbjct: 400 EKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAK 456
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 18/255 (7%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILS-------WTSMIAGYAQSGHPAEALDLFRRMVRTD 53
+ + C +L RRI IL W +++ Y + P +A+ ++ MVR+
Sbjct: 53 LLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRST 112
Query: 54 IRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAR 113
+ PD +L V+ A + + G+E+ G D+ ++ + +Y K G + AR
Sbjct: 113 VLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENAR 172
Query: 114 EVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
+VFD ++ L W ++I G NEA+ +F M + PD S+ +C
Sbjct: 173 KVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK-RSGLEPDDFTMVSVTASC--G 229
Query: 174 GLVEDGLKFFKSMHEDFGIAPT-----VKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQA 228
GL + L F +H+ A T + L D+ G+ G++DLA + M
Sbjct: 230 GLGDLSLAF--QLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM-RQRNV 286
Query: 229 QAWSCLLSACRIHGN 243
+WS ++ +GN
Sbjct: 287 VSWSSMIVGYAANGN 301
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 176/307 (57%), Gaps = 6/307 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + AR +F+ + K+++ WT+M+ GY Q EAL+LFR M IRPD L
Sbjct: 223 YVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVL 282
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
++L+ CA G+L +G+ I YI + +D+ V T+L+ MY+KCG I+ A EVF + +
Sbjct: 283 VSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE 342
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKM-TVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D WTS+I A++GM A++L+++M V R+ DAI + ++L AC+H G V +G
Sbjct: 343 RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRL--DAITFVAVLTACNHGGFVAEGR 400
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA---VDAIQGMPLDVQAQAWSCLLSA 237
K F SM E + P +H +CL DLL R G LD A +D ++G + + LLSA
Sbjct: 401 KIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSA 460
Query: 238 CRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKEC 297
R +GNV++ E A KL + S ++ L+A++Y S +W++ +R + + K
Sbjct: 461 ARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFP 520
Query: 298 GRSQVEV 304
G S +E+
Sbjct: 521 GCSSIEI 527
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 132/273 (48%), Gaps = 34/273 (12%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGA 59
MYA + ++FD ++++SW +I+ Y +G +A+ +F+RM + ++++ D
Sbjct: 90 MYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEG 149
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T+ + LSAC+ L +L G+ I ++ + ++ ++ +L+ M+ KCG + KAR VFD +
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIM---------------------- 157
DK++ WTSM+ Y G +EA LF + V++ ++
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 158 --------PDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRV 209
PD V S+L C+ +G +E G ++E+ V T L D+ +
Sbjct: 269 CMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVG-TALVDMYAKC 327
Query: 210 GQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
G ++ A++ + + +W+ L+ ++G
Sbjct: 328 GCIETALEVFYEIK-ERDTASWTSLIYGLAMNG 359
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 10/262 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
++L + M+ A + L LF + + PD TL VL + L + +G+++
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGN 141
Y GL+ D V SL+ MY+ G I+ +VFD + +D+ W +I+ Y +G
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 142 EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTC 201
+AI +F +M+ E + D S L ACS +E G + ++ + +F + +V+
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNA 187
Query: 202 LADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAK-LSDLSPG 260
L D+ + G LD A M D + W+ + + G V G + A+ L + SP
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSM-----VFGYVSTGRIDEARVLFERSPV 241
Query: 261 SSGS-YVLMANLYTSLGKWKEA 281
+ M N Y ++ EA
Sbjct: 242 KDVVLWTAMMNGYVQFNRFDEA 263
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + +A +F ++ SWTS+I G A +G ALDL+ M +R D T
Sbjct: 323 MYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAIT 382
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQ------TSLLHMYSKCGSIQKARE 114
VL+AC G +++G++I + + VQ + L+ + + G + +A E
Sbjct: 383 FVAVLTACNHGGFVAEGRKI-----FHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEE 437
Query: 115 VFDRV 119
+ D++
Sbjct: 438 LIDKM 442
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 170/293 (58%), Gaps = 1/293 (0%)
Query: 14 IFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGS 73
+F + K+ ++WT+MI+ + +G+ EAL F +M++ ++ P+ T ++VLSA A L
Sbjct: 394 LFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLAD 453
Query: 74 LSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINC 133
L +G +I + + D VQ SL+ MY KCG+ A ++F +++ ++ + +MI+
Sbjct: 454 LIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG 513
Query: 134 YAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIA 193
Y+ +G G +A+ LF + + P+ + + ++L AC H G V+ G K+FKSM + I
Sbjct: 514 YSYNGFGKKALKLFSMLESSGK-EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIE 572
Query: 194 PTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAK 253
P HY C+ DLLGR G LD A + I MP + W LLSA + H V+L ELAA K
Sbjct: 573 PGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKK 632
Query: 254 LSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEVKA 306
L +L P S+ YV+++ LY+ +GK ++ + N+ K + K+ G S + +K
Sbjct: 633 LIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKG 685
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 39/255 (15%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGAT 60
Y K + AR +FD +N+++WT+MI GY ++G + LF RM + D++ + T
Sbjct: 218 YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
LA + AC D +G +I + L+ D + SL+ MYSK G + +A+ VF +
Sbjct: 278 LAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERI------------------------ 156
+KD W S+I +EA LF KM ++ +
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 157 MP--DAIVYTSILLACSHSGLVEDGLKFFKSMHE------DFGIAPTVKHYTCLADLL-- 206
MP D I +T+++ A +G E+ L +F M + + + + LADL+
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457
Query: 207 ----GRVGQLDLAVD 217
GRV ++++ D
Sbjct: 458 LQIHGRVVKMNIVND 472
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 4 KCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLAT 63
KCD L A +F KN +S+ +MI G+ ++G EA L+ T ++ + +
Sbjct: 126 KCD-LGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLY---AETPVKFRDSVASN 181
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQ-TSLLHMYSKCGSIQKAREVFDRVTDK 122
VL + G L G+ E G+ + + V +S++H Y K G I AR +FDR+T++
Sbjct: 182 VLLS----GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER 237
Query: 123 DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
++ WT+MI+ Y G + LF +M E + ++ + AC
Sbjct: 238 NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 40/181 (22%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+K + A+ +F + K+ +SW S+I G Q +EA +LF +M
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----------- 367
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
G+++ + T ++ +S G I K E+F +
Sbjct: 368 ---------------PGKDMVSW-------------TDMIKGFSGKGEISKCVELFGMMP 399
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+KD WT+MI+ + +G EA+ FHKM +++ + P++ ++S+L A + + +GL
Sbjct: 400 EKDNITWTAMISAFVSNGYYEEALCWFHKM-LQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 181 K 181
+
Sbjct: 459 Q 459
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC N A +IF + NI+S+ +MI+GY+ +G +AL LF + + P+G T
Sbjct: 482 MYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
Query: 61 LATVLSACADLGSLSKG 77
+LSAC +G + G
Sbjct: 542 FLALLSACVHVGYVDLG 558
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 174/309 (56%), Gaps = 13/309 (4%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+ ++ A ++FD ++++SW MI ++ G +AL +++RM + D TL
Sbjct: 152 YSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTL 211
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ------VQTSLLHMYSKCGSIQKAREV 115
+LS+CA + +L+ G + L+ + D + V +L+ MY+KCGS++ A V
Sbjct: 212 VALLSSCAHVSALNMG------VMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGV 265
Query: 116 FDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGL 175
F+ + +D+ W SMI Y +HG G EAI+ F KM V + P+AI + +LL CSH GL
Sbjct: 266 FNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM-VASGVRPNAITFLGLLLGCSHQGL 324
Query: 176 VEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
V++G++ F+ M F + P VKHY C+ DL GR GQL+ +++ I W LL
Sbjct: 325 VKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
Query: 236 SACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVK 295
+C+IH N+ELGE+A KL L ++G YVLM ++Y++ + MR LI +L
Sbjct: 385 GSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQT 444
Query: 296 ECGRSQVEV 304
G S +E+
Sbjct: 445 VPGWSWIEI 453
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 17/245 (6%)
Query: 7 NLTSARRIFD-LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI-RPDGATLATV 64
+L+ A+ +FD + + W +I G++ S P ++ + RM+ + + RPD T
Sbjct: 54 SLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFA 113
Query: 65 LSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL 124
L +C + S+ K EI + G D V TSL+ YS GS++ A +VFD + +DL
Sbjct: 114 LKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDL 173
Query: 125 TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFK 184
W MI C++ G+ N+A++++ +M E + D+ ++L +C+H + G+ +
Sbjct: 174 VSWNVMICCFSHVGLHNQALSMYKRMG-NEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 185 SMHEDFGIAPTVKHYTC------LADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
IA ++ +C L D+ + G L+ A+ GM W+ ++
Sbjct: 233 -------IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGY 284
Query: 239 RIHGN 243
+HG+
Sbjct: 285 GVHGH 289
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC +L +A +F+ +++L+W SMI GY GH EA+ FR+MV + +RP+ T
Sbjct: 252 MYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAIT 311
Query: 61 LATVLSACADLGSLSKGQEIEEYI-YLYGLDLDQQVQTSLLHMYSKCGSIQKARE-VFDR 118
+L C+ G + +G E E + + L + + ++ +Y + G ++ + E ++
Sbjct: 312 FLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYAS 371
Query: 119 VTDKDLTIWTSMINCYAIH 137
+D +W +++ IH
Sbjct: 372 SCHEDPVLWRTLLGSCKIH 390
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 164/290 (56%), Gaps = 1/290 (0%)
Query: 14 IFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGS 73
+F + ++I+SW SMI+ ++ G EAL+LF M+ PD AT+ TVL A LG
Sbjct: 190 LFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGV 249
Query: 74 LSKGQEIEEYIYLYGLDLDQ-QVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMIN 132
L G+ I GL D V +L+ Y K G ++ A +F ++ +++ W ++I+
Sbjct: 250 LDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLIS 309
Query: 133 CYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGI 192
A++G G I+LF M E ++ P+ + +L CS++G VE G + F M E F +
Sbjct: 310 GSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKL 369
Query: 193 APTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAA 252
+HY + DL+ R G++ A ++ MP++ A W LLSACR HG+V+L E+AA
Sbjct: 370 EARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAM 429
Query: 253 KLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQV 302
+L + PG+SG+YVL++NLY G+W++ +R L+ L K G+S +
Sbjct: 430 ELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 117/277 (42%), Gaps = 36/277 (12%)
Query: 5 CDNLTS---ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
C +L++ A R+F N+L + +MI Y+ G P E+L F M I D T
Sbjct: 46 CGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTY 105
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
A +L +C+ L L G+ + + G +++ ++ +Y+ G + A++VFD +++
Sbjct: 106 APLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSE 165
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMT------------------------------ 151
+++ +W MI + G ++LF +M+
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 152 VEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPT-VKHYTCLADLLGRVG 210
+++ PD ++L + G+++ G K+ S E G+ + L D + G
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTG-KWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 211 QLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELG 247
L+ A + M +W+ L+S ++G E G
Sbjct: 285 DLEAATAIFRKMQRR-NVVSWNTLISGSAVNGKGEFG 320
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 170/305 (55%), Gaps = 1/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC + A+R+FD T +NI T+++ Y Q EAL+LF +M ++ P+ T
Sbjct: 281 MYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYT 340
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A +L++ A+L L +G + + G V +L++MY+K GSI+ AR+ F +T
Sbjct: 341 FAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMT 400
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D+ W +MI+ + HG+G EA+ F +M I P+ I + +L ACSH G VE GL
Sbjct: 401 FRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI-PNRITFIGVLQACSHIGFVEQGL 459
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F + + F + P ++HYTC+ LL + G A D ++ P++ AW LL+AC +
Sbjct: 460 HYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYV 519
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
N LG+ A + P SG YVL++N++ +W+ +R+L++ + + KE G S
Sbjct: 520 RRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVS 579
Query: 301 QVEVK 305
+ ++
Sbjct: 580 WIGIR 584
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 3/213 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGA 59
+Y KC AR++FDL +N++SW +M+ GY SG E L LF+ M + + RP+
Sbjct: 78 LYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEF 137
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
V +C++ G + +G++ YGL + V+ +L++MYS C +A V D +
Sbjct: 138 VATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDL 197
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
DL++++S ++ Y G E +++ K T E + + + Y S L S+ +
Sbjct: 198 PYCDLSVFSSALSGYLECGAFKEGLDVLRK-TANEDFVWNNLTYLSSLRLFSNLRDLNLA 256
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQL 212
L+ M FG V+ L ++ G+ G++
Sbjct: 257 LQVHSRMVR-FGFNAEVEACGALINMYGKCGKV 288
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 3/242 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+ C A R+ D ++ ++S ++GY + G E LD+ R+ D + T
Sbjct: 180 MYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLT 239
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ L ++L L+ ++ + +G + + + +L++MY KCG + A+ VFD
Sbjct: 240 YLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTH 299
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+++ + T++++ Y EA+NLF KM +E + P+ + +L + + L++ G
Sbjct: 300 AQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE-VPPNEYTFAILLNSIAELSLLKQG- 357
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ G V L ++ + G ++ A A GM W+ ++S C
Sbjct: 358 DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSH 416
Query: 241 HG 242
HG
Sbjct: 417 HG 418
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDL---DQQVQTSLLHMYSKCGSIQKAREVFD 117
L +L CA+ L G+ I ++ + D SL+++Y KC +AR++FD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+ ++++ W +M+ Y G E + LF M P+ V T + +CS+SG +E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 178 DGLKF 182
+G +F
Sbjct: 154 EGKQF 158
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 197 bits (502), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 171/305 (56%), Gaps = 2/305 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y KC A +F T SW MI+ Y G+ +A++++ +MV ++PD T
Sbjct: 353 LYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVT 412
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+VL AC+ L +L KG++I I L+ D+ + ++LL MYSKCG+ ++A +F+ +
Sbjct: 413 FTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD+ WT MI+ Y HG EA+ F +M + + PD + ++L AC H+GL+++GL
Sbjct: 473 KKDVVSWTVMISAYGSHGQPREALYQFDEMQ-KFGLKPDGVTLLAVLSACGHAGLIDEGL 531
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMP-LDVQAQAWSCLLSACR 239
KFF M +GI P ++HY+C+ D+LGR G+L A + IQ P A+ S L SAC
Sbjct: 532 KFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACC 591
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+H LG+ A L + P + +Y+++ NLY S W A +R + L K+ G
Sbjct: 592 LHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGC 651
Query: 300 SQVEV 304
S +E+
Sbjct: 652 SWIEM 656
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 125/243 (51%), Gaps = 3/243 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK + ++ ++FD +++ SW ++I+ + QSG +AL+LF RM + P+ +
Sbjct: 151 MYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVS 210
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +SAC+ L L +G+EI G +LD+ V ++L+ MY KC ++ AREVF ++
Sbjct: 211 LTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP 270
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K L W SMI Y G + + ++M +E P TSIL+ACS S + G
Sbjct: 271 RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG-TRPSQTTLTSILMACSRSRNLLHG- 328
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
KF + + L DL + G+ +LA DV A++W+ ++S+
Sbjct: 329 KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDV-AESWNVMISSYIS 387
Query: 241 HGN 243
GN
Sbjct: 388 VGN 390
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 117/244 (47%), Gaps = 5/244 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KCD L AR +F K++++W SMI GY G +++ RM+ RP T
Sbjct: 252 MYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTT 311
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L ++L AC+ +L G+ I Y+ ++ D V SL+ +Y KCG A VF + T
Sbjct: 312 LTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-T 370
Query: 121 DKDLT-IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
KD+ W MI+ Y G +A+ ++ +M V + PD + +TS+L ACS +E G
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQLAALEKG 429
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ S+ E + + L D+ + G A +P +W+ ++SA
Sbjct: 430 KQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYG 487
Query: 240 IHGN 243
HG
Sbjct: 488 SHGQ 491
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 1 MYAKCDNLTSARRIFD-LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI-RPDG 58
+Y C + SAR +F+ ++ W S+++GY+++ + L++F+R++ I PD
Sbjct: 48 VYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDS 107
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T V+ A LG G+ I + G D V +SL+ MY+K + + +VFD
Sbjct: 108 FTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDE 167
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ ++D+ W ++I+C+ G +A+ LF +M P+++ T + ACS +E
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRME-SSGFEPNSVSLTVAISACSRLLWLER 226
Query: 179 GLKFF-KSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMP 223
G + K + + F + V + L D+ G+ L++A + Q MP
Sbjct: 227 GKEIHRKCVKKGFELDEYVN--SALVDMYGKCDCLEVAREVFQKMP 270
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 172/306 (56%), Gaps = 3/306 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K SA+++FD+ ++++ WT MI G+++ G+ A+ F M R R DG +
Sbjct: 446 MYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFS 505
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L++V+ AC+D+ L +G+ G D V +L+ MY K G + A +F +
Sbjct: 506 LSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLAS 565
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ DL W SM+ Y+ HGM +A++ F ++ +E MPDA+ Y S+L ACSH G G
Sbjct: 566 NPDLKCWNSMLGAYSQHGMVEKALSFFEQI-LENGFMPDAVTYLSLLAACSHRGSTLQG- 623
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAI-QGMPLDVQAQAWSCLLSACR 239
KF + ++ GI KHY+C+ +L+ + G +D A++ I Q P + QA+ W LLSAC
Sbjct: 624 KFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACV 683
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
N+++G AA ++ L P + +++L++NLY G+W++ MR I G K+ G
Sbjct: 684 NTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGL 743
Query: 300 SQVEVK 305
S +EV
Sbjct: 744 SWIEVN 749
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 123/246 (50%), Gaps = 4/246 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGA 59
MY C ++ A +F N++SW S+I+G +++G +A+ ++RR++R + RPD
Sbjct: 344 MYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEY 403
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T + +SA A+ G+ + + G + V T+LL MY K + A++VFD +
Sbjct: 404 TFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVM 463
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++D+ +WT MI ++ G A+ F +M E+ D +S++ ACS ++ G
Sbjct: 464 KERDVVLWTEMIVGHSRLGNSELAVQFFIEM-YREKNRSDGFSLSSVIGACSDMAMLRQG 522
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ F + G + L D+ G+ G+ + A + I + + + W+ +L A
Sbjct: 523 -EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNSMLGAYS 580
Query: 240 IHGNVE 245
HG VE
Sbjct: 581 QHGMVE 586
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+ C +L SARRIFD ++ ++W +MI G ++ + L FR M+ + + P T
Sbjct: 243 MYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFT 302
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ VL+ C+ LGS S G+ I I + D + +LL MY CG +++A VF R+
Sbjct: 303 YSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH 362
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLA 169
+ +L W S+I+ + +G G +A+ ++ ++ PD +++ + A
Sbjct: 363 NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 125/276 (45%), Gaps = 16/276 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAE-ALDLFRRMVRTDIRPDGA 59
MY +C +L AR++FD +N++S+ ++ + Y+++ A A L M ++P+ +
Sbjct: 141 MYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T +++ CA L + G + I G + VQTS+L MYS CG ++ AR +FD V
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAIN---LFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
++D W +MI + + N+ I +F + + + P Y+ +L CS G
Sbjct: 261 NNRDAVAWNTMI----VGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 177 EDGLKFFKSMHEDFGIAPTVKHY---TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSC 233
G K +H ++ ++ L D+ G + A + G + +W+
Sbjct: 317 SLG----KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAF-YVFGRIHNPNLVSWNS 371
Query: 234 LLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMA 269
++S C +G E L +L +S Y A
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSA 407
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 92/190 (48%), Gaps = 14/190 (7%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSW--TSMIAGYAQSGHPAEA----LDLFRRMVRTDI 54
MY +C +L AR++FD +NI++ S + Y G + L F+ + +
Sbjct: 31 MYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPL 90
Query: 55 RPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ---VQTSLLHMYSKCGSIQK 111
+++ + C + L + ++I + G + +L+ MY +CGS+++
Sbjct: 91 NEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQ 150
Query: 112 AREVFDRVTDKDLTIWTSMINCYAIHG-MGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
AR+VFD++ +++ + ++ + Y+ + + A L M E + P++ +TS++ C
Sbjct: 151 ARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAF-EYVKPNSSTFTSLVQVC 209
Query: 171 SHSGLVEDGL 180
+ ++ED L
Sbjct: 210 A---VLEDVL 216
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 175/336 (52%), Gaps = 32/336 (9%)
Query: 1 MYAKCDNLTSARRIFDLTAGKN-------------------------------ILSWTSM 29
YAKC +L AR +FD + K+ + +W +M
Sbjct: 278 FYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 30 IAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGL 89
I+G Q+ H E ++ FR M+R RP+ TL+++L + +L G+EI + G
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGA 397
Query: 90 DLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHK 149
D + V TS++ Y+K G + A+ VFD D+ L WT++I YA+HG + A +LF +
Sbjct: 398 DNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQ 457
Query: 150 MTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRV 209
M PD + T++L A +HSG + F SM + I P V+HY C+ +L R
Sbjct: 458 MQCLG-TKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRA 516
Query: 210 GQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMA 269
G+L A++ I MP+D A+ W LL+ + G++E+ A +L ++ P ++G+Y +MA
Sbjct: 517 GKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMA 576
Query: 270 NLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEVK 305
NLYT G+W+EA ++RN + L K G S +E +
Sbjct: 577 NLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETE 612
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGAT 60
Y KCDN+ SAR++FD + ++++SW SMI+GY+QSG + +++ M+ +D +P+G T
Sbjct: 177 YTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT 236
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +V AC L G E+ + + + +D + +++ Y+KCGS+ AR +FD ++
Sbjct: 237 VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS 296
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKM 150
+KD + ++I+ Y HG+ EA+ LF +M
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD------I 54
Y + D A +FD +N S+ +++ Y +A LF + +
Sbjct: 66 FYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAA 125
Query: 55 RPDGATLATVL---SACAD--LGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSI 109
RPD +++ VL S C D LGSL++ ++ ++ G D D V ++ Y+KC +I
Sbjct: 126 RPDSISISCVLKALSGCDDFWLGSLAR--QVHGFVIRGGFDSDVFVGNGMITYYTKCDNI 183
Query: 110 QKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLA 169
+ AR+VFD ++++D+ W SMI+ Y+ G + ++ M P+ + S+ A
Sbjct: 184 ESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQA 243
Query: 170 CSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ 229
C S + GL+ K M E+ I + + + G LD A M + +
Sbjct: 244 CGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMS-EKDSV 301
Query: 230 AWSCLLSACRIHGNVE 245
+ ++S HG V+
Sbjct: 302 TYGAIISGYMAHGLVK 317
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 174/306 (56%), Gaps = 9/306 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+K +L SA ++FD +++ SW ++IAG +EA++L++RM IR T+
Sbjct: 154 YSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTV 213
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ-VQTSLLHMYSKCGSIQKAREVFDRVT 120
L AC+ LG + +G+ I +G D V + + MYSKCG + KA +VF++ T
Sbjct: 214 VAALGACSHLGDVKEGENI-----FHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFT 268
Query: 121 -DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
K + W +MI +A+HG + A+ +F K+ + I PD + Y + L AC H+GLVE G
Sbjct: 269 GKKSVVTWNTMITGFAVHGEAHRALEIFDKLE-DNGIKPDDVSYLAALTACRHAGLVEYG 327
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
L F +M G+ +KHY C+ DLL R G+L A D I M + W LL A
Sbjct: 328 LSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASE 386
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
I+ +VE+ E+A+ ++ ++ + G +VL++N+Y + G+WK+ +R+ ++ K++ K G
Sbjct: 387 IYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGL 446
Query: 300 SQVEVK 305
S +E K
Sbjct: 447 SYIEAK 452
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 106/256 (41%), Gaps = 12/256 (4%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI------RPDGAT 60
+L+ A +IF W ++I G+A S HP+ A +R M++ R D T
Sbjct: 52 DLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALT 111
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ L ACA S ++ I GL D + T+LL YSK G + A ++FD +
Sbjct: 112 CSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMP 171
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D+ W ++I +EA+ L+ +M E I + + L ACSH G V++G
Sbjct: 172 VRDVASWNALIAGLVSGNRASEAMELYKRMETEG-IRRSEVTVVAALGACSHLGDVKEGE 230
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
F D I D+ + G +D A + W+ +++ +
Sbjct: 231 NIFHGYSNDNVIVSNAA-----IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 241 HGNVELGELAAAKLSD 256
HG KL D
Sbjct: 286 HGEAHRALEIFDKLED 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 1 MYAKCDNLTSARRIFD-LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY+KC + A ++F+ T K++++W +MI G+A G AL++F ++ I+PD
Sbjct: 250 MYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDV 309
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ L+AC G + G + + G++ + + ++ + S+ G +++A ++ +
Sbjct: 310 SYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSM 369
Query: 120 T-DKDLTIWTSMINCYAIH 137
+ D +W S++ I+
Sbjct: 370 SMIPDPVLWQSLLGASEIY 388
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 161/278 (57%), Gaps = 4/278 (1%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
+W S+I+G++Q G EA F RM+ + P L ++LSAC+D+ +L G+EI ++
Sbjct: 335 TWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHV 394
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV--TDKDLTIWTSMINCYAIHGMGNE 142
+ D V TSL+ MY KCG AR +FDR KD W MI+ Y HG
Sbjct: 395 IKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECES 454
Query: 143 AINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCL 202
AI +F ++ EE++ P +T++L ACSH G VE G + F+ M E++G P+ +H C+
Sbjct: 455 AIEIF-ELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCM 513
Query: 203 ADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGSS 262
DLLGR G+L A + I M + S LL +CR H + LGE AA KL++L P +
Sbjct: 514 IDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENP 572
Query: 263 GSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
+V+++++Y +L +W++ +R +ID K+LVK G S
Sbjct: 573 APFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 7/208 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGA 59
MY++C A R+F+ K+++++ + I+G ++G +F M + + P+
Sbjct: 173 MYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDV 232
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T ++ACA L +L G+++ + + V T+L+ MYSKC + A VF +
Sbjct: 233 TFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTEL 292
Query: 120 TD-KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
D ++L W S+I+ I+G A+ LF K+ E + PD+ + S++ S G V +
Sbjct: 293 KDTRNLISWNSVISGMMINGQHETAVELFEKLD-SEGLKPDSATWNSLISGFSQLGKVIE 351
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLL 206
KFF+ M + P++K CL LL
Sbjct: 352 AFKFFERML-SVVMVPSLK---CLTSLL 375
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 15/287 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K +T A ++ D + I S + ++G ++G +A +F + + T
Sbjct: 75 MYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVT 134
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+A+VL C D+ G ++ G +++ V TSL+ MYS+CG A +F++V
Sbjct: 135 VASVLGGCGDI---EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP 191
Query: 121 DKDLTIWTSMINCYAIHGMGN---EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
K + + + I+ +G+ N NL K + EE P+ + + + + AC+ ++
Sbjct: 192 HKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEE---PNDVTFVNAITACASLLNLQ 248
Query: 178 DGLKFFK-SMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
G + M ++F V T L D+ + A + +W+ ++S
Sbjct: 249 YGRQLHGLVMKKEFQFETMVG--TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVIS 306
Query: 237 ACRIHGNVELGELAAAKLSD--LSPGSSGSYVLMANLYTSLGKWKEA 281
I+G E KL L P S+ L++ ++ LGK EA
Sbjct: 307 GMMINGQHETAVELFEKLDSEGLKPDSATWNSLISG-FSQLGKVIEA 352
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 1 MYAKCDNLTSARRIFDL--TAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDG 58
MY KC + ARRIFD K+ + W MI+GY + G A+++F + + P
Sbjct: 412 MYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSL 471
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
AT VLSAC+ G++ KG +I + YG + ++ + + G +++A+EV D
Sbjct: 472 ATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVID 531
Query: 118 RV 119
++
Sbjct: 532 QM 533
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 164/303 (54%), Gaps = 1/303 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC+ + +A ++F + KN +SW ++I GY G +A +FR +R + T
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVT 451
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++ L ACA L S+ G ++ V SL+ MY+KCG I+ A+ VF+ +
Sbjct: 452 FSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME 511
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D+ W ++I+ Y+ HG+G +A+ + M + P+ + + +L CS++GL++ G
Sbjct: 512 TIDVASWNALISGYSTHGLGRQALRILDIMK-DRDCKPNGLTFLGVLSGCSNAGLIDQGQ 570
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F+SM D GI P ++HYTC+ LLGR GQLD A+ I+G+P + W +LSA
Sbjct: 571 ECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMN 630
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
N E +A ++ ++P +YVL++N+Y +W +R + + KE G S
Sbjct: 631 QNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLS 690
Query: 301 QVE 303
+E
Sbjct: 691 WIE 693
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 119/242 (49%), Gaps = 3/242 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y + +++ A ++F+ +++ W+ MIA + Q+G EA+DLF RM + P+ T
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L+++L+ CA G+++ + G DLD V +L+ +Y+KC + A ++F ++
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K+ W ++I Y G G +A ++F + + ++ + ++S L AC+ ++ G+
Sbjct: 411 SKNEVSWNTVIVGYENLGEGGKAFSMFRE-ALRNQVSVTEVTFSSALGACASLASMDLGV 469
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ + A V L D+ + G + A M + +W+ L+S
Sbjct: 470 Q-VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISGYST 527
Query: 241 HG 242
HG
Sbjct: 528 HG 529
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+ C ++ SAR +F+ K+I+ W +++ Y ++G+ ++L L M P+ T
Sbjct: 191 YSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF 250
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
T L A LG+ + + I LD +V LL +Y++ G + A +VF+ +
Sbjct: 251 DTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPK 310
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
D+ W+ MI + +G NEA++LF +M E ++P+ +SIL C+
Sbjct: 311 NDVVPWSFMIARFCQNGFCNEAVDLFIRMR-EAFVVPNEFTLSSILNGCA 359
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 17/240 (7%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y K A +FD +N +S+ ++ GYA + + L+ R+ R +
Sbjct: 94 YVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVF 149
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+ L L + I G D + V +L++ YS CGS+ AR VF+ +
Sbjct: 150 TSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILC 209
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
KD+ +W +++CY +G +++ L M + MP+ + + L A G
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG-FMPNNYTFDTALKASIGLG----AFD 264
Query: 182 FFKSMHED-----FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
F K +H + + P V L L ++G + A MP + WS +++
Sbjct: 265 FAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKN-DVVPWSFMIA 321
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 169/289 (58%), Gaps = 8/289 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC ++ AR +FD+ K+ +SW SM+ GY G EALD+FR MV+ I PD
Sbjct: 239 MYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVA 298
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+++VL A + S G+++ ++ G++ + V +L+ +YSK G + +A +FD++
Sbjct: 299 ISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQML 355
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++D W ++I+ ++ + G + H+ + PD I + S+L C+++G+VEDG
Sbjct: 356 ERDTVSWNAIISAHSKNSNGLKYFEQMHRANAK----PDGITFVSVLSLCANTGMVEDGE 411
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAI-QGMPLDVQAQAWSCLLSACR 239
+ F M +++GI P ++HY C+ +L GR G ++ A I Q M L+ W LL AC
Sbjct: 412 RLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACY 471
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLI 288
+HGN ++GE+AA +L +L P + ++ L+ +Y+ + ++ +R ++
Sbjct: 472 LHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMM 520
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 124/248 (50%), Gaps = 14/248 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKN--ILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDG 58
+YA C A +FD + ++ +W S+I+GYA+ G +A+ L+ +M ++PD
Sbjct: 136 LYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDR 195
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T VL AC +GS+ G+ I + G D V +L+ MY+KCG I KAR VFD
Sbjct: 196 FTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDM 255
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSIL---LACSHSGL 175
+ KD W SM+ Y HG+ +EA+++F ++ V+ I PD + +S+L L+ H G
Sbjct: 256 IPHKDYVSWNSMLTGYLHHGLLHEALDIF-RLMVQNGIEPDKVAISSVLARVLSFKH-GR 313
Query: 176 VEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
G + M + +A L L + GQL A M L+ +W+ ++
Sbjct: 314 QLHGWVIRRGMEWELSVA------NALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAII 366
Query: 236 SACRIHGN 243
SA + N
Sbjct: 367 SAHSKNSN 374
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A++L C L ++ G + I Y L + + + L+ +Y+ CG + A EVFDR++
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 121 DKDLT--IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+D + W S+I+ YA G +A+ L+ +M E+ + PD + +L AC G V+
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMA-EDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 179 GLKFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
G +++H D G V L + + G + A + +P +W+ +L
Sbjct: 214 G----EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP-HKDYVSWNSML 268
Query: 236 SACRIHG 242
+ HG
Sbjct: 269 TGYLHHG 275
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 159/298 (53%), Gaps = 5/298 (1%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACAD 70
A +F L KNI++WT+MI GY ++G +AL F M+++ + D VL AC+
Sbjct: 290 ALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSG 349
Query: 71 LGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSM 130
L L G+ I + G V +L+++Y+KCG I++A F + +KDL W +M
Sbjct: 350 LALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTM 409
Query: 131 INCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDF 190
+ + +HG+ ++A+ L+ M + I PD + + +L CSHSGLVE+G F+SM +D+
Sbjct: 410 LFAFGVHGLADQALKLYDNM-IASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDY 468
Query: 191 GIAPTVKHYTCLADLLGRVGQL----DLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVEL 246
I V H TC+ D+ GR G L DLA + +W LL AC H + EL
Sbjct: 469 RIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTEL 528
Query: 247 GELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEV 304
G + L P S+VL++NLY S G+WKE +R + + + K G S +EV
Sbjct: 529 GREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEV 586
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 3 AKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLA 62
AK + SAR++FD + ++W +M+ Y++ G EA+ LF ++ +D +PD +
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 63 TVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF-DRVTD 121
+LS CA LG++ G++I+ + G V SL+ MY KC A +VF D D
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 122 -KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++ W S++ Y A+++F +M +R+ A + ++ +H G +E L
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMP--KRV---AFAWNIMISGHAHCGKLESCL 189
Query: 181 KFFKSMHE 188
FK M E
Sbjct: 190 SLFKEMLE 197
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 35/273 (12%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + +A +F + +W MI+G+A G L LF+ M+ ++ +PD T
Sbjct: 148 YMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTF 207
Query: 62 ATVLSAC-ADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGS------------ 108
+++++AC AD ++ G+ + + G + + S+L Y+K GS
Sbjct: 208 SSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIE 267
Query: 109 -------------------IQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHK 149
+KA EVF +K++ WT+MI Y +G G +A+ F +
Sbjct: 268 VLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVE 327
Query: 150 MTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRV 209
M ++ + D Y ++L ACS L+ G K G L +L +
Sbjct: 328 M-MKSGVDSDHFAYGAVLHACSGLALLGHG-KMIHGCLIHCGFQGYAYVGNALVNLYAKC 385
Query: 210 GQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
G + A D G + +W+ +L A +HG
Sbjct: 386 GDIKEA-DRAFGDIANKDLVSWNTMLFAFGVHG 417
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAKC ++ A R F A K+++SW +M+ + G +AL L+ M+ + I+PD T
Sbjct: 381 LYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVT 440
Query: 61 LATVLSACADLGSLSKGQEI-EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREV 115
+L+ C+ G + +G I E + Y + L+ T ++ M+ + G + +A+++
Sbjct: 441 FIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 6/182 (3%)
Query: 97 TSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERI 156
TS + +K G I AR+VFD + + D W +M+ Y+ G+ EAI LF ++ +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSD-A 66
Query: 157 MPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAV 216
PD +T+IL C+ G V+ G K +S+ G ++ L D+ G+ A
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRK-IQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSAN 125
Query: 217 DAIQGMPLDVQAQ-AWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSL 275
+ M D + + W LL A + N E E A ++ + ++ +M + +
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 276 GK 277
GK
Sbjct: 183 GK 184
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 168/301 (55%), Gaps = 7/301 (2%)
Query: 6 DNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATV 64
++ T ++F +++ ++I++W +I +A P A+ LF ++ + + PD T ++V
Sbjct: 317 EDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSV 375
Query: 65 LSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL 124
L ACA L + I + G D + SL+H Y+KCGS+ VFD + +D+
Sbjct: 376 LKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDV 435
Query: 125 TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFK 184
W SM+ Y++HG + + +F KM + PD+ + ++L ACSH+G VE+GL+ F+
Sbjct: 436 VSWNSMLKAYSLHGQVDSILPVFQKMDIN----PDSATFIALLSACSHAGRVEEGLRIFR 491
Query: 185 SMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNV 244
SM E P + HY C+ D+L R + A + I+ MP+D A W LL +CR HGN
Sbjct: 492 SMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNT 551
Query: 245 ELGELAAAKLSDL-SPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVE 303
LG+LAA KL +L P +S SY+ M+N+Y + G + EA++ ++ + KE S E
Sbjct: 552 RLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTE 611
Query: 304 V 304
+
Sbjct: 612 I 612
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC N+ AR++FD +N++SWT++I GY Q+G+ E LF M+ + P+ T
Sbjct: 105 MYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFT 163
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKC---GSIQKAREVFD 117
L++VL++C G+++ GL V +++ MY +C + +A VF+
Sbjct: 164 LSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFE 219
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKM 150
+ K+L W SMI + +G +AI +F +M
Sbjct: 220 AIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM 252
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 140/317 (44%), Gaps = 36/317 (11%)
Query: 1 MYAKCDNLTSARR---IFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
MY +C + +A +F+ KN+++W SMIA + +A+ +F RM + D
Sbjct: 201 MYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFD 260
Query: 58 GATLATVLSACADLGSLSKGQ------EIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQK 111
ATL + S+ L + ++ GL +V T+L+ +YS
Sbjct: 261 RATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYS------- 313
Query: 112 AREVFDRVTD-----------KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDA 160
E+ + TD +D+ W +I +A++ AI+LF ++ +E++ PD
Sbjct: 314 --EMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLR-QEKLSPDW 369
Query: 161 IVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQ 220
++S+L AC+ L + + +A TV + + L + G LDL +
Sbjct: 370 YTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS-LIHAYAKCGSLDLCMRVFD 428
Query: 221 GMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKE 280
M +W+ +L A +HG V+ L + D++P S +++ + + + G+ +E
Sbjct: 429 DMD-SRDVVSWNSMLKAYSLHGQVD-SILPVFQKMDINP-DSATFIALLSACSHAGRVEE 485
Query: 281 A-HIMRNLIDGKELVKE 296
I R++ + E + +
Sbjct: 486 GLRIFRSMFEKPETLPQ 502
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YAKC +L R+FD ++++SW SM+ Y+ G L +F++M DI PD AT
Sbjct: 414 YAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATF 470
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTS-LLHMYSKCGSIQKAREVFDRVT 120
+LSAC+ G + +G I ++ L Q + ++ M S+ +A EV ++
Sbjct: 471 IALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMP 530
Query: 121 -DKDLTIWTSMINCYAIHG 138
D D +W +++ HG
Sbjct: 531 MDPDAVVWIALLGSCRKHG 549
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQV--QTSLLHMYSKCGSIQKAREVFDRV 119
A + ACA+ +L G + ++ + Q V L++MY+KCG+I AR+VFD +
Sbjct: 63 AALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTM 122
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS-GLVED 178
++++ WT++I Y G E LF M P+ +S+L +C + G
Sbjct: 123 PERNVVSWTALITGYVQAGNEQEGFCLFSSML--SHCFPNEFTLSSVLTSCRYEPGKQVH 180
Query: 179 GLKFFKSMHEDFGIAPTV 196
GL +H +A V
Sbjct: 181 GLALKLGLHCSIYVANAV 198
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 171/300 (57%), Gaps = 2/300 (0%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
+ A +F+ K+++SW S+I G+AQ G +A+ F + ++I+ D + +L
Sbjct: 357 TMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLR 416
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
+C+DL +L GQ+I G ++ V +SL+ MYSKCG I+ AR+ F +++ K T+
Sbjct: 417 SCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTV 476
Query: 127 -WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKS 185
W +MI YA HG+G +++LF +M + + D + +T+IL ACSH+GL+++GL+
Sbjct: 477 AWNAMILGYAQHGLGQVSLDLFSQM-CNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL 535
Query: 186 MHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
M + I P ++HY DLLGR G ++ A + I+ MPL+ L CR G +E
Sbjct: 536 MEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIE 595
Query: 246 LGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEVK 305
+ A L ++ P +YV ++++Y+ L KW+E ++ ++ + + K G S +E++
Sbjct: 596 MATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIR 655
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 5/244 (2%)
Query: 2 YAKCDNLTSARRIFD-LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
YA C +++ A+R+FD L K+++SW SMIAG+++ A +LF +M R + D T
Sbjct: 248 YADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYT 307
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSK--CGSIQKAREVFDR 118
+LSAC+ G+ + + GL+ +L+ MY + G+++ A +F+
Sbjct: 308 YTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFES 367
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ KDL W S+I +A G+ +A+ F + E I D ++++L +CS ++
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE-IKVDDYAFSALLRSCSDLATLQL 426
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
G + ++ G + L + + G ++ A Q + AW+ ++
Sbjct: 427 GQQ-IHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGY 485
Query: 239 RIHG 242
HG
Sbjct: 486 AQHG 489
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM-VRTDIRPDGA 59
MYAKC+ + A F + N +SW ++IAG+ Q A L M ++ + D
Sbjct: 145 MYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAG 204
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T A +L+ D + +++ + GL + + +++ Y+ CGS+ A+ VFD +
Sbjct: 205 TFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGL 264
Query: 120 -TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
KDL W SMI ++ H + A LF +M + D YT +L ACS E+
Sbjct: 265 GGSKDLISWNSMIAGFSKHELKESAFELFIQMQ-RHWVETDIYTYTGLLSACSG----EE 319
Query: 179 GLKFFKSMH 187
F KS+H
Sbjct: 320 HQIFGKSLH 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y K L A +FD ++ +SW +MI+GY G +A LF M R+ DG +
Sbjct: 45 YIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSF 104
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+ +L A + G+++ + G + + V +SL+ MY+KC ++ A E F +++
Sbjct: 105 SRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISE 164
Query: 122 KDLTIWTSMI 131
+ W ++I
Sbjct: 165 PNSVSWNALI 174
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKN-ILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY+KC + SAR+ F + K+ ++W +MI GYAQ G +LDLF +M +++ D
Sbjct: 452 MYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHV 511
Query: 60 TLATVLSACADLGSLSKGQEIEEYIY-LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T +L+AC+ G + +G E+ + +Y + + + + + + G + KA+E+ +
Sbjct: 512 TFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIES 571
Query: 119 V 119
+
Sbjct: 572 M 572
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 177/304 (58%), Gaps = 6/304 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC ++ AR++F+ + KN +SW++++ GY Q+G +A+++FR M D+ G
Sbjct: 309 MYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFG-- 366
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
TVL ACA L ++ G+EI G + V+++L+ +Y K G I A V+ +++
Sbjct: 367 --TVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS 424
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+++ W +M++ A +G G EA++ F+ M V++ I PD I + +IL AC H+G+V++G
Sbjct: 425 IRNMITWNAMLSALAQNGRGEEAVSFFNDM-VKKGIKPDYISFIAILTACGHTGMVDEGR 483
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F M + +GI P +HY+C+ DLLGR G + A + ++ A W LL C
Sbjct: 484 NYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAA 543
Query: 241 HGNV-ELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+ + + E A ++ +L P SYVL++N+Y ++G+ +A +R L+ + + K G+
Sbjct: 544 NADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQ 603
Query: 300 SQVE 303
S ++
Sbjct: 604 SWID 607
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 143/271 (52%), Gaps = 18/271 (6%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR-TDIRPDGATLATVLSACA 69
ARR+FD +++ WT++++ ++++ EAL LF M R + PDG+T TVL+AC
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 70 DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTS 129
+L L +G+EI + G+ + V++SLL MY KCGS+++AR+VF+ ++ K+ W++
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
++ Y +G +AI +F +M EE+ D + ++L AC+ V G K +H
Sbjct: 337 LLGGYCQNGEHEKAIEIFREM--EEK---DLYCFGTVLKACAGLAAVRLG----KEIHGQ 387
Query: 190 F---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVEL 246
+ G V + L DL G+ G +D A M + W+ +LSA +G
Sbjct: 388 YVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGR--- 443
Query: 247 GELAAAKLSDL-SPGSSGSYVLMANLYTSLG 276
GE A + +D+ G Y+ + T+ G
Sbjct: 444 GEEAVSFFNDMVKKGIKPDYISFIAILTACG 474
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 118/231 (51%), Gaps = 8/231 (3%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
+ RR+FD K+ +SWTSM++GY +AL++F MV + + TL++ + A
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKA 172
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
C++LG + G+ + +G + + + ++L ++Y AR VFD + + D+ W
Sbjct: 173 CSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICW 232
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
T++++ ++ + + EA+ LF+ M + ++PD + ++L AC + ++ G K +H
Sbjct: 233 TAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQG----KEIH 288
Query: 188 EDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
GI V + L D+ G+ G + A GM + +WS LL
Sbjct: 289 GKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALL 338
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 37 GHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQ 96
G EA+ + ++I A++L C + S G + ++ GL+ D+ V
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 97 TSLLHMYSKCG-SIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEER 155
SLL +Y K G +++ R VFD KD WTSM++ Y +A+ +F +M V
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM-VSFG 158
Query: 156 IMPDAIVYTSILLACSHSGLVEDGLKF 182
+ + +S + ACS G V G F
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCF 185
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 190 bits (483), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 168/306 (54%), Gaps = 8/306 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + ++ AR IF ++++ W ++IAGYAQ+G+ +A+D F M PD T+
Sbjct: 218 YFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTV 277
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+++LSACA G L G+E+ I G++L+Q V +L+ MY+KCG ++ A VF+ ++
Sbjct: 278 SSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISV 337
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+ + SMI+C AIHG G EA+ +F M + + PD I + ++L AC H G + +GLK
Sbjct: 338 RSVACCNSMISCLAIHGKGKEALEMFSTMESLD-LKPDEITFIAVLTACVHGGFLMEGLK 396
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
F M + P VKH+ CL LLGR G+L A ++ M + LL AC++H
Sbjct: 397 IFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVH 455
Query: 242 GNVELGELAAAKLSDLSPGSSGSY-----VLMANLYTSLGKWKEAHIMRNLIDGKELVKE 296
+ E+ E K+ + + + SY ++NLY +W+ A +R ++ + L K
Sbjct: 456 MDTEMAE-QVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKS 514
Query: 297 CGRSQV 302
G S +
Sbjct: 515 PGLSSL 520
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 31/269 (11%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMV---------- 50
MY KC + SAR++FD +N+ +W +MI GY +G A LF +
Sbjct: 90 MYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIE 149
Query: 51 -------RTDIRPDGA-------TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ-- 94
R +I L V + LG +++E+ + D+ ++
Sbjct: 150 MIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFE-DIPEKNA 208
Query: 95 -VQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVE 153
V + ++ Y + G + +AR +F RV +DL IW ++I YA +G ++AI+ F M
Sbjct: 209 FVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ-G 267
Query: 154 ERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLD 213
E PDA+ +SIL AC+ SG ++ G + S+ GI L D+ + G L+
Sbjct: 268 EGYEPDAVTVSSILSACAQSGRLDVG-REVHSLINHRGIELNQFVSNALIDMYAKCGDLE 326
Query: 214 LAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
A + + + A S ++S IHG
Sbjct: 327 NATSVFESISVRSVACCNS-MISCLAIHG 354
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 25/233 (10%)
Query: 27 TSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACA------DLGSLSKGQEI 80
+++I + G P +AL L+ + R + G + +L ACA LG L + I
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPG-WVPLILRACACVVPRVVLGKLLHSESI 73
Query: 81 EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMG 140
+ +G+ D V +SL+ MY KCG + AR+VFD + ++++ W +MI Y +G
Sbjct: 74 K-----FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDA 128
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
A LF +++V + + + ++ +E + F+ M + VK ++
Sbjct: 129 VLASGLFEEISV----CRNTVTWIEMIKGYGKRIEIEKARELFERMPFEL---KNVKAWS 181
Query: 201 CLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAK 253
+ + +++ A + +P + A WS ++S G +G++ A+
Sbjct: 182 VMLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLMMS-----GYFRIGDVHEAR 228
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC +L +A +F+ + +++ SMI+ A G EAL++F M D++PD T
Sbjct: 318 MYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEIT 377
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKA-REVFDRV 119
VL+AC G L +G +I + + + + L+H+ + G +++A R V +
Sbjct: 378 FIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 437
Query: 120 TDKDLTIWTSMINCYAIH 137
+ T+ +++ +H
Sbjct: 438 VKPNDTVLGALLGACKVH 455
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 164/280 (58%), Gaps = 3/280 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K L+SA +F+ K++++W + +A Q+G+ A AL+ F +M ++ D T
Sbjct: 153 MYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFT 212
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ ++LSAC LGSL G+EI + +D + V+ + L M+ KCG+ + AR +F+ +
Sbjct: 213 VVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK 272
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+++ W++MI YA++G EA+ LF M E + P+ + + +L ACSH+GLV +G
Sbjct: 273 QRNVVSWSTMIVGYAMNGDSREALTLFTTMQ-NEGLRPNYVTFLGVLSACSHAGLVNEGK 331
Query: 181 KFFKSM--HEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
++F M D + P +HY C+ DLLGR G L+ A + I+ MP++ W LL AC
Sbjct: 332 RYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGAC 391
Query: 239 RIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKW 278
+H ++ LG+ A L + +P +VL++N+Y + GKW
Sbjct: 392 AVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKW 431
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
++ AR++FD I W ++ GY ++ P E+L L+++M +RPD T V+
Sbjct: 58 DMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVK 117
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
A + LG S G + ++ YG V T L+ MY K G + A +F+ + KDL
Sbjct: 118 AISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVA 177
Query: 127 WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
W + + G A+ F+KM + + D+ S+L AC G +E G
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADA-VQFDSFTVVSMLSACGQLGSLEIG 229
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 172/303 (56%), Gaps = 2/303 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
MY+K D++ + +F+ ++SW S+I+G QSG + A ++F +M+ T + PD
Sbjct: 391 MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T+A++L+ C+ L L+ G+E+ Y + + V T+L+ MY+KCG+ +A VF +
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSI 510
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
W SMI+ Y++ G+ + A++ + +M E+ + PD I + +L AC+H G V++G
Sbjct: 511 KAPCTATWNSMISGYSLSGLQHRALSCYLEMR-EKGLKPDEITFLGVLSACNHGGFVDEG 569
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
F++M ++FGI+PT++HY + LLGR A+ I M + + W LLSAC
Sbjct: 570 KICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACI 629
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
IH +E+GE A K+ L + G YVLM+NLY + W + +RN++ G
Sbjct: 630 IHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGV 689
Query: 300 SQV 302
SQ+
Sbjct: 690 SQI 692
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 36/278 (12%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y K +TSA+ +FD ++ + W ++I GY+++G+ +A LF M++ P T
Sbjct: 94 LYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATT 153
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +L C G +S+G+ + GL+LD QV+ +L+ YSKC + A +F +
Sbjct: 154 LVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMK 213
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLF----------------------------HKMTV 152
DK W +MI Y+ G+ EAI +F H + V
Sbjct: 214 DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVV 273
Query: 153 EERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQL 212
+ ++ D V TS++ A S G + + + S +D ++ T + G +
Sbjct: 274 KCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQD-----SIVGLTSIVSCYAEKGDM 328
Query: 213 DLAV---DAIQGMPLDVQAQAWSCLLSACRIHGNVELG 247
D+AV + + + + A A +L C+ ++++G
Sbjct: 329 DIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIG 366
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y++C L SA R++ +I+ TS+++ YA+ G A+ F + + ++ D L
Sbjct: 291 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 350
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+L C + G + Y GL V L+ MYSK ++ +F+++ +
Sbjct: 351 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 410
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
L W S+I+ G + A +FH+M + ++PDAI S+L CS
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQ 461
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y+KC L SA +F K+ +SW +MI Y+QSG EA+ +F+ M ++ T
Sbjct: 195 FYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVT 254
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +LSA + + + G+ D V TSL+ YS+CG + A ++
Sbjct: 255 IINLLSAHVS------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAK 308
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ TS+++CYA G + A+ F K T + + DA+ IL C S ++ G+
Sbjct: 309 QDSIVGLTSIVSCYAEKGDMDIAVVYFSK-TRQLCMKIDAVALVGILHGCKKSSHIDIGM 367
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 40 AEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQ--EIEEYIYLYGLDLDQQVQT 97
+ + +FR ++R+ + P+ T++ L A + K Q +++ ++ GLD V+T
Sbjct: 30 SSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKT 89
Query: 98 SLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIM 157
SLL++Y K G + A+ +FD + ++D +W ++I Y+ +G +A LF M +++
Sbjct: 90 SLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVM-LQQGFS 148
Query: 158 PDAIVYTSILLACSHSGLVEDG 179
P A ++L C G V G
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQG 170
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 166/318 (52%), Gaps = 17/318 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYA----QSGHPA-EALDLFRRM--VRTD 53
YAK +L AR++FD + ++W +MI GY + H A +A+ LFRR +
Sbjct: 156 FYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSG 215
Query: 54 IRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGL--DLDQQVQTSLLHMYSKCGSIQK 111
+RP T+ VLSA + G L G + YI G ++D + T+L+ MYSKCG +
Sbjct: 216 VRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNN 275
Query: 112 AREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
A VF+ + K++ WTSM A++G GNE NL ++M E I P+ I +TS+L A
Sbjct: 276 AFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMA-ESGIKPNEITFTSLLSAYR 334
Query: 172 HSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAW 231
H GLVE+G++ FKSM FG+ P ++HY C+ DLLG+ G++ A I MP+ A
Sbjct: 335 HIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILL 394
Query: 232 SCLLSACRIHGNVELGELAAAKL-------SDLSPGSSGSYVLMANLYTSLGKWKEAHIM 284
L +AC I+G +GE L LS YV ++N+ GKW E +
Sbjct: 395 RSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKL 454
Query: 285 RNLIDGKELVKECGRSQV 302
R + + + G S V
Sbjct: 455 RKEMKERRIKTRPGYSFV 472
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHG-MGN-- 141
+LY +L + T+LLH Y+K G ++ AR+VFD + ++ W +MI Y H GN
Sbjct: 142 FLYESEL---IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHN 198
Query: 142 --EAINLFHKMT-VEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKH 198
+A+ LF + + + P +L A S +GL+E G E G P V
Sbjct: 199 ARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG-SLVHGYIEKLGFTPEVDV 257
Query: 199 Y--TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
+ T L D+ + G L+ A + M + W+ + + ++G
Sbjct: 258 FIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATGLALNG 302
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 162/294 (55%), Gaps = 3/294 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIR-PDGAT 60
Y+ + A+R+FD + KN++ WT+M GY P L+L R + + PD
Sbjct: 336 YSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLV 395
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +VL AC+ + G+EI + G+ +D+++ T+ + MYSKCG+++ A +FD
Sbjct: 396 MVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSF 455
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++D ++ +MI A HG ++ F MT E PD I + ++L AC H GLV +G
Sbjct: 456 ERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT-EGGFKPDEITFMALLSACRHRGLVLEGE 514
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM-PLDVQAQAWSCLLSACR 239
K+FKSM E + I+P HYTC+ DL G+ +LD A++ ++G+ ++ A L+AC
Sbjct: 515 KYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACS 574
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKEL 293
+ N EL + KL + + Y+ +AN Y S G+W E +R+ + GKEL
Sbjct: 575 WNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKEL 628
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 39/257 (15%)
Query: 21 KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEI 80
+ +SW ++IAGYAQ+G+ EAL + M ++ D + VL+ + L SL G+E+
Sbjct: 223 NDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEV 282
Query: 81 EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQ------------------------------ 110
+ G ++ V + ++ +Y KCG+++
Sbjct: 283 HARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKM 342
Query: 111 -KAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLA 169
+A+ +FD +++K+L +WT+M Y + + L E PD++V S+L A
Sbjct: 343 VEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGA 402
Query: 170 CSHSGLVEDGLKFFKSMHED---FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDV 226
CS +E G K +H GI K T D+ + G ++ A + I +
Sbjct: 403 CSLQAYMEPG----KEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYA-ERIFDSSFER 457
Query: 227 QAQAWSCLLSACRIHGN 243
++ +++ C HG+
Sbjct: 458 DTVMYNAMIAGCAHHGH 474
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 104/195 (53%), Gaps = 11/195 (5%)
Query: 2 YAKCDNLTSARRIFDL-TAGKNILSWTSMIAGYAQS-GHPAEALDLFRRMVRT---DIRP 56
Y K +N+ AR +F+ ++++++ ++++G+A++ G +EA+++F M R DI
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
D T+ T++ A L ++ G+++ + G D + +SL+HMYSKCG ++ +F
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 117 DR--VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
+ V D +MI Y G ++A+++F + + D I + +++ + +G
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPE----LNDTISWNTLIAGYAQNG 239
Query: 175 LVEDGLKFFKSMHED 189
E+ LK SM E+
Sbjct: 240 YEEEALKMAVSMEEN 254
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC N+ A RIFD + ++ + + +MIAG A GH A++ F M +PD T
Sbjct: 437 MYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEIT 496
Query: 61 LATVLSACADLGSLSKGQE-IEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+LSAC G + +G++ + I Y + + T ++ +Y K + KA E+ + +
Sbjct: 497 FMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGI 556
Query: 120 --TDKDLTIWTSMIN 132
+KD I + +N
Sbjct: 557 DQVEKDAVILGAFLN 571
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 170/311 (54%), Gaps = 8/311 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIR-PDGAT 60
Y K A +F +++++W ++I G++Q+G EA++ F M+R + P+ +T
Sbjct: 169 YLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNEST 228
Query: 61 LATVLSACADLGSLSKGQEIEE-YIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
++A +++ S G+ I I G + V SL+ YSKCG+++ + F+++
Sbjct: 229 FPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKL 288
Query: 120 TD--KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+ +++ W SMI YA +G G EA+ +F KM + + P+ + +L AC+H+GL++
Sbjct: 289 EEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQ 348
Query: 178 DGLKFFKSMHEDFGIAPTV---KHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCL 234
+G +F D+ P + +HY C+ D+L R G+ A + I+ MPLD W L
Sbjct: 349 EGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKAL 407
Query: 235 LSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELV 294
L C+IH N L +LAA+K+ +L P SYV+++N Y+++ W+ ++R + L
Sbjct: 408 LGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLK 467
Query: 295 KECGRSQVEVK 305
+ G S +EV+
Sbjct: 468 RFTGCSWIEVR 478
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 13/257 (5%)
Query: 6 DNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVL 65
D + +A ++FD +++S T++I + + EA F+R++ IRP+ T TV+
Sbjct: 41 DLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVI 100
Query: 66 SACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT 125
+ + G+++ Y GL + V +++L+ Y K ++ AR FD D ++
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVV 160
Query: 126 IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPD--AIVYTSILLACSHSGLVEDGLKFF 183
T++I+ Y EA++LF R MP+ + + +++ S +G E+ + F
Sbjct: 161 SITNLISGYLKKHEFEEALSLF-------RAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 213
Query: 184 KSMHEDFGIAPTVKHYTC----LADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
M + + P + C ++++ + AI+ + W+ L+S
Sbjct: 214 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYS 273
Query: 240 IHGNVELGELAAAKLSD 256
GN+E LA KL +
Sbjct: 274 KCGNMEDSLLAFNKLEE 290
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 136/218 (62%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
L SA +F+ +N++SWT+MI Y ++ P EA LFRRM D++P+ T+ +L A
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
LGSLS G+ + +Y + G LD + T+L+ MYSKCGS+Q AR+VFD + K L W
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
SMI +HG G EA++LF +M E + PDAI + +L AC+++G V+DGL++F M
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI 380
Query: 188 EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLD 225
+ +GI+P +H C+ LL + +++ A + ++ M D
Sbjct: 381 QVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSD 418
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLF-RRMVRTDIRPDGA 59
MY+KC +L AR++FD+ GK++ +W SMI G EAL LF + PD
Sbjct: 295 MYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAI 354
Query: 60 TLATVLSACADLGSLSKG-QEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T VLSACA+ G++ G + I +YG+ ++ ++ + + ++KA + +
Sbjct: 355 TFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVES 414
Query: 119 VTDKDLTIWTSMINCYA 135
+ D D +S N Y
Sbjct: 415 M-DSDPDFNSSFGNEYT 430
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 41/267 (15%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLF-RRMVRTDIRPDGATLATVLSACA 69
A +F+ + +W MI + + P EAL LF M+ + D T V+ AC
Sbjct: 71 ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACL 130
Query: 70 DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD-------- 121
S+ G ++ G D Q +L+ +Y KCG R+VFD++
Sbjct: 131 ASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTT 190
Query: 122 -----------------------KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMP 158
+++ WT+MI Y + +EA LF +M V++ + P
Sbjct: 191 MLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD-VKP 249
Query: 159 DAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA--- 215
+ ++L A + G + G H++ G T L D+ + G L A
Sbjct: 250 NEFTIVNLLQASTQLGSLSMGRWVHDYAHKN-GFVLDCFLGTALIDMYSKCGSLQDARKV 308
Query: 216 VDAIQGMPLDVQAQAWSCLLSACRIHG 242
D +QG L W+ ++++ +HG
Sbjct: 309 FDVMQGKSL----ATWNSMITSLGVHG 331
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 171/314 (54%), Gaps = 19/314 (6%)
Query: 3 AKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMV-RTDIRPDGATL 61
K + L R +F +N ++WT M+AGY +G E L+L MV R + TL
Sbjct: 188 VKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTL 247
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDL-----------DQQVQTSLLHMYSKCGSIQ 110
++LSACA G+L G+ ++++Y L D V T+L+ MY+KCG+I
Sbjct: 248 CSMLSACAQSGNLVVGR----WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNID 303
Query: 111 KAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
+ VF + +++ W ++ + A+HG G I++F +M E + PD + +T++L AC
Sbjct: 304 SSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSAC 361
Query: 171 SHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQA 230
SHSG+V++G + F S+ +G+ P V HY C+ DLLGR G ++ A ++ MP+
Sbjct: 362 SHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVV 420
Query: 231 WSCLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDG 290
LL +C +HG VE+ E +L +SPG++ +LM+N+Y + G+ A +R +
Sbjct: 421 LGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRK 480
Query: 291 KELVKECGRSQVEV 304
+ + K G S + V
Sbjct: 481 RGIRKIPGLSSIYV 494
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC N+ S+ +F L +N+++W ++ +G A G +D+F +M+R +++PD T
Sbjct: 295 MYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLT 353
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR-- 118
VLSAC+ G + +G + YGL+ ++ + + G I++A E+ R
Sbjct: 354 FTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEA-EILMREM 412
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAI 161
+ + S++ ++HG K+ + ERI + I
Sbjct: 413 PVPPNEVVLGSLLGSCSVHG----------KVEIAERIKRELI 445
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 113/283 (39%), Gaps = 42/283 (14%)
Query: 1 MYAKCDNLTSARRIFDLT--AGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDG 58
YA + +A+++FD + K+ + WT++++ +++ G ++ LF M R + D
Sbjct: 52 FYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDD 111
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCG----------- 107
++ + CA L L Q+ G+ +V +L+ MY KCG
Sbjct: 112 VSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEE 171
Query: 108 --------------------SIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLF 147
+++ REVF + +++ WT M+ Y G E + L
Sbjct: 172 LEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELL 231
Query: 148 HKMTVEERIMPDAIVYTSILLACSHSGLVEDG-------LKFFKSMHEDFGIAPTVKHYT 200
+M + + S+L AC+ SG + G LK M E+ V T
Sbjct: 232 AEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASY-DDVMVGT 290
Query: 201 CLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGN 243
L D+ + G +D +++ + M W+ L S +HG
Sbjct: 291 ALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGK 332
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 163/289 (56%), Gaps = 2/289 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY++C + SA +F+ + ++++ +S+I GY++ G+ EAL LF + + +PD
Sbjct: 251 MYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVL 310
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+A VL +CA+L G+E+ Y+ GL+LD +V ++L+ MYSKCG ++ A +F +
Sbjct: 311 VAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP 370
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K++ + S+I +HG + A F ++ +E ++PD I ++++L C HSGL+ G
Sbjct: 371 EKNIVSFNSLILGLGLHGFASTAFEKFTEI-LEMGLIPDEITFSALLCTCCHSGLLNKGQ 429
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F+ M +FGI P +HY + L+G G+L+ A + + + + + LLS C +
Sbjct: 430 EIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEV 489
Query: 241 HGNVELGELAAAKLSDLSPGSSGSY-VLMANLYTSLGKWKEAHIMRNLI 288
H N L E+ A + Y V+++N+Y G+W E +R+ I
Sbjct: 490 HENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGI 538
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 133/294 (45%), Gaps = 39/294 (13%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
YA D+L SAR++FD+ +++ W S+I YA++ L LF +++R+D RPD T
Sbjct: 49 FYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFT 108
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A + ++ + I + GL DQ ++++ YSK G I +A ++F +
Sbjct: 109 YACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIP 168
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D DL +W MI Y G ++ INLF+ M P+ YT + L SGL++ L
Sbjct: 169 DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH-QPNC--YTMVALT---SGLIDPSL 222
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+A +V H CL +++L + G L C+ SAC +
Sbjct: 223 LL---------VAWSV-HAFCL--------KINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEA-HIMRNL-IDGKE 292
++ +L A S L G Y+ G KEA H+ L + GK+
Sbjct: 265 FNSISEPDLVAC--SSLITG-----------YSRCGNHKEALHLFAELRMSGKK 305
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 8/225 (3%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+K + A ++F ++ W MI GY G + ++LF M +P+ T+
Sbjct: 151 YSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTM 210
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+ S D L + + LD V +L++MYS+C I A VF+ +++
Sbjct: 211 VALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISE 270
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
DL +S+I Y+ G EA++LF ++ + + PD ++ +L +C+ G
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAELRMSGK-KPDCVLVAIVLGSCAELSDSVSG-- 327
Query: 182 FFKSMHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMP 223
K +H G+ +K + L D+ + G L A+ G+P
Sbjct: 328 --KEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP 370
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 173/301 (57%), Gaps = 11/301 (3%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGH-PAEALDLFRRMVRTDIRPDGAT 60
Y KC +L +A ++ + T +++LS T++I G++Q + ++A D+F+ M+R + D
Sbjct: 259 YVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVV 318
Query: 61 LATVLSACADLGSLSKGQEIEEY-IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
++++L C + S++ G++I + + + D + SL+ MY+K G I+ A F+ +
Sbjct: 319 VSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEM 378
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+KD+ WTS+I Y HG +AI+L+++M ERI P+ + + S+L ACSH+G E G
Sbjct: 379 KEKDVRSWTSLIAGYGRHGNFEKAIDLYNRME-HERIKPNDVTFLSLLSACSHTGQTELG 437
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMP--LDVQAQAWSCLLSA 237
K + +M GI +H +C+ D+L R G L+ A I+ + + + W L A
Sbjct: 438 WKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDA 497
Query: 238 CRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKEC 297
CR HGNV+L ++AA +L + P +Y+ +A++Y + G W N ++ ++L+KE
Sbjct: 498 CRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWD------NALNTRKLMKES 551
Query: 298 G 298
G
Sbjct: 552 G 552
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 102/169 (60%), Gaps = 1/169 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y K ++ AR++FD + ++++SWT+MI+ +++ G+ +AL LF+ M R D++ + T
Sbjct: 56 LYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFT 115
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+VL +C DLG L +G +I + + V+++LL +Y++CG +++AR FD +
Sbjct: 116 YGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK 175
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLA 169
++DL W +MI+ Y + + + +LF M E + PD + S+L A
Sbjct: 176 ERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGK-KPDCFTFGSLLRA 223
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 3/246 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YA+C + AR FD ++++SW +MI GY + + LF+ M+ +PD T
Sbjct: 157 LYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFT 216
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++L A + L E+ G + SL++ Y KCGS+ A ++ +
Sbjct: 217 FGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTK 276
Query: 121 DKDLTIWTSMINCYA-IHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+DL T++I ++ + ++A ++F M + + D +V +S+L C+ V G
Sbjct: 277 KRDLLSCTALITGFSQQNNCTSDAFDIFKDM-IRMKTKMDEVVVSSMLKICTTIASVTIG 335
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ + I V L D+ + G+++ AV A + M + ++W+ L++
Sbjct: 336 RQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYG 394
Query: 240 IHGNVE 245
HGN E
Sbjct: 395 RHGNFE 400
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK + A F+ K++ SWTS+IAGY + G+ +A+DL+ RM I+P+ T
Sbjct: 361 MYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVT 420
Query: 61 LATVLSACADLGSLSKGQEI-EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKA 112
++LSAC+ G G +I + I +G++ ++ + ++ M ++ G +++A
Sbjct: 421 FLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 94 QVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVE 153
Q++ L+ +Y K G ++ AR++FDR++ +D+ WT+MI+ ++ G +A+ LF +M E
Sbjct: 48 QLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRE 107
Query: 154 ERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLD 213
+ + + Y S+L +C G +++G++ S+ E A + + L L R G+++
Sbjct: 108 D-VKANQFTYGSVLKSCKDLGCLKEGMQIHGSV-EKGNCAGNLIVRSALLSLYARCGKME 165
Query: 214 LA 215
A
Sbjct: 166 EA 167
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 166/305 (54%), Gaps = 1/305 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YA + A + ++ +++TS++ + + G AL + M IR D +L
Sbjct: 472 YASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSL 531
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+SA A+LG+L G+ + Y G V SL+ MYSKCGS++ A++VF+ +
Sbjct: 532 PGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT 591
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
D+ W +++ A +G + A++ F +M ++E PD++ + +L ACS+ L + GL+
Sbjct: 592 PDVVSWNGLVSGLASNGFISSALSAFEEMRMKE-TEPDSVTFLILLSACSNGRLTDLGLE 650
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIH 241
+F+ M + + I P V+HY L +LGR G+L+ A ++ M L A + LL ACR
Sbjct: 651 YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYR 710
Query: 242 GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQ 301
GN+ LGE A K L+P Y+L+A+LY GK + A RNL+ K L K+ G+S
Sbjct: 711 GNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKST 770
Query: 302 VEVKA 306
VEV+
Sbjct: 771 VEVQG 775
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 9/223 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y K D + +AR++FD + + + +WT MI+ + +S A AL LF M+ + P+ T
Sbjct: 67 LYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFT 126
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++V+ +CA L +S G + + G + + V +SL +YSKCG ++A E+F +
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ D WT MI+ EA+ + +M V+ + P+ + +L A S GL
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEM-VKAGVPPNEFTFVKLLGASSFL-----GL 240
Query: 181 KFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQ 220
+F K++H + GI V T L D + +++ AV +
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN 283
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 141/319 (44%), Gaps = 26/319 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y+KC A +F + +SWT MI+ + EAL + MV+ + P+ T
Sbjct: 168 LYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT 227
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+L A + LG L G+ I I + G+ L+ ++TSL+ YS+ ++ A V +
Sbjct: 228 FVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG 286
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++D+ +WTS+++ + + EA+ F +M + P+ Y++IL CS L
Sbjct: 287 EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR-SLGLQPNNFTYSAILSLCS----AVRSL 341
Query: 181 KFFKSMHED---FGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
F K +H G + L D+ + ++ + G + +W+ L+
Sbjct: 342 DFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILG 401
Query: 238 CRIHGNVE--LGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWK--------EAHIMRNL 287
HG V+ G L ++ P + V ++ + + K + A+++R
Sbjct: 402 LVDHGFVQDCFGLLMEMVKREVEP----NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Query: 288 IDGKELVKECGRSQVEVKA 306
+DG+ +V G S V+ A
Sbjct: 458 VDGEMVV---GNSLVDAYA 473
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 6/272 (2%)
Query: 1 MYAKCD-NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY KC + A R+F N++SWT++I G G + L MV+ ++ P+
Sbjct: 369 MYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVV 428
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
TL+ VL AC+ L + + EI Y+ +D + V SL+ Y+ + A V +
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+D +TS++ + G A+++ + M + I D + + A ++ G +E G
Sbjct: 489 KRRDNITYTSLVTRFNELGKHEMALSVINYM-YGDGIRMDQLSLPGFISASANLGALETG 547
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
K G + L D+ + G L+ A + + +W+ L+S
Sbjct: 548 -KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP-DVVSWNGLVSGLA 605
Query: 240 IHGNVE--LGELAAAKLSDLSPGSSGSYVLMA 269
+G + L ++ + P S +L++
Sbjct: 606 SNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC +L A+++F+ A +++SW +++G A +G + AL F M + PD T
Sbjct: 572 MYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVT 631
Query: 61 LATVLSACADLGSLSKGQEIEEYI-YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+LSAC++ G E + + +Y ++ + L+ + + G +++A V + +
Sbjct: 632 FLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETM 691
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+ P+A+++ ++L AC + G + G
Sbjct: 692 -----------------------------------HLKPNAMIFKTLLRACRYRGNLSLG 716
Query: 180 LKFFKSMHEDFGIAPT-VKHYTCLADLLGRVGQLDLA 215
++ +AP+ Y LADL G+ +LA
Sbjct: 717 EDM---ANKGLALAPSDPALYILLADLYDESGKPELA 750
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 176/305 (57%), Gaps = 9/305 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y C + A + D K+++S ++MI+G A +G EA+ +F M T P+ T+
Sbjct: 373 YTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITV 429
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDL-DQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++L+AC+ L + L + D V TS++ Y+KCG+I+ AR FD++T
Sbjct: 430 ISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT 489
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K++ WT +I+ YAI+G+ ++A+ LF +M ++ P+A+ Y + L AC+H GLV+ GL
Sbjct: 490 EKNIISWTVIISAYAINGLPDKALALFDEMK-QKGYTPNAVTYLAALSACNHGGLVKKGL 548
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQ--AQAWSCLLSAC 238
FKSM E+ P+++HY+C+ D+L R G++D AV+ I+ +P DV+ A AW +LS C
Sbjct: 549 MIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGC 607
Query: 239 RIH-GNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKEC 297
R + + A++ +L P S Y+L ++ + + W++ +MR L+ +++
Sbjct: 608 RNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVA 667
Query: 298 GRSQV 302
G S V
Sbjct: 668 GYSMV 672
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 4/172 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMV-RTDIRPDGA 59
MYA D+L SAR++FD + ++++SW+ +I Y QS P L LF+ MV PD
Sbjct: 169 MYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCV 227
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDL-DQQVQTSLLHMYSKCGSIQKAREVFDR 118
T+ +VL AC + + G+ + + G DL D V SL+ MYSK + A VFD
Sbjct: 228 TVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDE 287
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
T +++ W S++ + + +EA+ +FH M V+E + D + S+L C
Sbjct: 288 TTCRNIVSWNSILAGFVHNQRYDEALEMFHLM-VQEAVEVDEVTVVSLLRVC 338
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 122/249 (48%), Gaps = 19/249 (7%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+K ++ SA R+FD T +NI+SW S++AG+ + EAL++F MV+ + D T
Sbjct: 271 MYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVT 330
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ ++L C + I I G + ++ +SL+ Y+ C + A V D +T
Sbjct: 331 VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMT 390
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KD+ ++MI+ A G +EAI++F M R P+AI S+L ACS V L
Sbjct: 391 YKDVVSCSTMISGLAHAGRSDEAISIFCHM----RDTPNAITVISLLNACS----VSADL 442
Query: 181 KFFKSMHEDFGIA-------PTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSC 233
+ K H GIA + T + D + G +++A + + +W+
Sbjct: 443 RTSKWAH---GIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT-EKNIISWTV 498
Query: 234 LLSACRIHG 242
++SA I+G
Sbjct: 499 IISAYAING 507
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y KC +L S R FD ++ +SW ++ G G E L F ++ P+ +T
Sbjct: 70 FYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTST 129
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L V+ AC L G++I Y+ G VQ S+L MY+ S+ AR++FD ++
Sbjct: 130 LVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMS 186
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
++D+ W+ +I Y + LF +M E + PD + TS+L AC+
Sbjct: 187 ERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 144/266 (54%), Gaps = 2/266 (0%)
Query: 1 MYAKCDNLTSARRIFDLTA-GKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
M+ KCD L +A +FD K+ +SW M+ GY G EA+ FR+M +P+
Sbjct: 546 MFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAV 605
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T ++ A A+L +L G + + G V SL+ MY+KCG I+ + + F +
Sbjct: 606 TFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEI 665
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++K + W +M++ YA HG+ + A++LF M E + PD++ + S+L AC H+GLVE+G
Sbjct: 666 SNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQ-ENELKPDSVSFLSVLSACRHAGLVEEG 724
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ F+ M E I V+HY C+ DLLG+ G AV+ ++ M + W LL++ R
Sbjct: 725 KRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSR 784
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSY 265
+H N+ L A +L L P + Y
Sbjct: 785 MHCNLWLSNAALCQLVKLEPLNPSHY 810
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 118/227 (51%), Gaps = 8/227 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY C +L +A +F+ K+ SW +M+A YA +G E L+LF M D+R +
Sbjct: 243 MYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVA 302
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A+ L A A +G L KG I +Y GL D V TSL+ MYSKCG ++ A ++F +
Sbjct: 303 AASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE 362
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D+D+ W++MI Y G +EAI+LF M + I P+A+ TS+L C+ G
Sbjct: 363 DRDVVSWSAMIASYEQAGQHDEAISLFRDM-MRIHIKPNAVTLTSVLQGCAGVAASRLG- 420
Query: 181 KFFKSMH---EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPL 224
KS+H I ++ T + + + G+ A+ A + +P+
Sbjct: 421 ---KSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPI 464
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 6/264 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC L A ++F ++++SW++MIA Y Q+G EA+ LFR M+R I+P+ T
Sbjct: 344 MYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVT 403
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +VL CA + + G+ I Y ++ + + T+++ MY+KCG A + F+R+
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH-SGLVEDG 179
KD + ++ Y G N+A +++ M + + PD+ +L C+ S
Sbjct: 464 IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG-VCPDSRTMVGMLQTCAFCSDYARGS 522
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ + + F V H L ++ + L A+ + +W+ +++
Sbjct: 523 CVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYL 580
Query: 240 IHGNVE--LGELAAAKLSDLSPGS 261
+HG E + K+ P +
Sbjct: 581 LHGQAEEAVATFRQMKVEKFQPNA 604
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGATLATVLSACA 69
+R IFD ++ W SMI GY ++G EAL F M I PD + L ACA
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 70 DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTS 129
KG I + I GL+ D + T+L+ MY K + AR+VFD++ KD+ W +
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 130 MINCYAIHGMGNEAINLFHKM 150
M++ A +G + A+ LFH M
Sbjct: 172 MVSGLAQNGCSSAALLLFHDM 192
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K +L SAR++FD K++++W +M++G AQ+G + AL LF M + D +
Sbjct: 144 MYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVS 203
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQ----QVQTSLLHMYSKCGSIQKAREVF 116
L ++ A +SK ++ + L+GL + + + L+ MY C + A VF
Sbjct: 204 LYNLIPA------VSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVF 257
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKM 150
+ V KD + W +M+ YA +G E + LF M
Sbjct: 258 EEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM 291
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 96 QTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEER 155
L++ YS +R +FD V D + +W SMI Y G+ EA+ F M+ E+
Sbjct: 36 HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKG 95
Query: 156 IMPDAIVYTSILLACSHSGLVEDGLK 181
I PD +T L AC+ S + GL+
Sbjct: 96 IDPDKYSFTFALKACAGSMDFKKGLR 121
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 158/303 (52%), Gaps = 4/303 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
++A N+ A ++F K+I++++ +I G +SG + A LFR +++ + D
Sbjct: 386 LHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFI 445
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++ +L C+ L SL G++I G + + T+L+ MY KCG I +FD +
Sbjct: 446 VSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGML 505
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++D+ WT +I + +G EA FHKM + I P+ + + +L AC HSGL+E+
Sbjct: 506 ERDVVSWTGIIVGFGQNGRVEEAFRYFHKM-INIGIEPNKVTFLGLLSACRHSGLLEEAR 564
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++M ++G+ P ++HY C+ DLLG+ G A + I MPL+ W+ LL+AC
Sbjct: 565 STLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGT 624
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKEL-VKECGR 299
H N L + A KL P Y ++N Y +LG W + +R K+L KE G
Sbjct: 625 HKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVRE--AAKKLGAKESGM 682
Query: 300 SQV 302
S +
Sbjct: 683 SWI 685
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY L+ A ++FD + +NI++WT+M++GY G P +A++L+RRM+ ++
Sbjct: 49 MYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEF 108
Query: 61 L-ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ + VL AC +G + G + E I L D + S++ MY K G + +A F +
Sbjct: 109 MYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI 168
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
T W ++I+ Y G+ +EA+ LFH+M P+ + + C SG V+ G
Sbjct: 169 LRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP-----QPNVVSWN-----CLISGFVDKG 218
Query: 180 ----LKFFKSMHED 189
L+F M +
Sbjct: 219 SPRALEFLVRMQRE 232
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 121/253 (47%), Gaps = 16/253 (6%)
Query: 1 MYAKCDNLTSARRIF---DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
MY+ C +L A +F L ++ W SM++G+ + AL L ++ ++D+ D
Sbjct: 282 MYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFD 341
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
TL+ L C + +L G ++ + + G +LD V + L+ +++ G+IQ A ++F
Sbjct: 342 SYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFH 401
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
R+ +KD+ ++ +I G + A LF ++ ++ + D + ++IL CS
Sbjct: 402 RLPNKDIIAFSGLIRGCVKSGFNSLAFYLFREL-IKLGLDADQFIVSNILKVCSSLA--- 457
Query: 178 DGLKFFKSMH-----EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWS 232
L + K +H + + P T L D+ + G++D V GM L+ +W+
Sbjct: 458 -SLGWGKQIHGLCIKKGYESEPVTA--TALVDMYVKCGEIDNGVVLFDGM-LERDVVSWT 513
Query: 233 CLLSACRIHGNVE 245
++ +G VE
Sbjct: 514 GIIVGFGQNGRVE 526
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 92/181 (50%), Gaps = 2/181 (1%)
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
D +A L C + + +G+ I+ ++ G+ + + +++ MY + A +VF
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
D ++++++ WT+M++ Y G N+AI L+ +M E + +Y+++L AC G +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
+ G+ ++ + ++ + V + D+ + G+L A + + + L + +W+ L+S
Sbjct: 124 QLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLIS 181
Query: 237 A 237
Sbjct: 182 G 182
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 159/302 (52%), Gaps = 2/302 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY L AR++FD ++ + +T+M GY Q G L +FR M + D
Sbjct: 178 MYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVV 237
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ ++L AC LG+L G+ + + L + ++ MY KC + A VF ++
Sbjct: 238 MVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS 297
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+D+ W+S+I Y + G + LF +M ++E I P+A+ + +L AC+H GLVE
Sbjct: 298 RRDVISWSSLILGYGLDGDVVMSFKLFDEM-LKEGIEPNAVTFLGVLSACAHGGLVEKSW 356
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F+ M E + I P +KHY +AD + R G L+ A ++ MP+ +LS C++
Sbjct: 357 LYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKV 415
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
+GNVE+GE A +L L P + YV +A LY++ G++ EA +R + K++ K G S
Sbjct: 416 YGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Query: 301 QV 302
+
Sbjct: 476 SI 477
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 2 YAKCDNL-TSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
Y+K ++L ++ +F +NI SW +I +++SG ++++DLF RM R +RPD
Sbjct: 76 YSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDF 135
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
TL +L AC+ G I G V ++L+ MY G + AR++FD +
Sbjct: 136 TLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM 195
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+D ++T+M Y G + +F +M + D++V S+L+AC G ++ G
Sbjct: 196 PVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFAL-DSVVMVSLLMACGQLGALKHG 254
Query: 180 LKFFKSMH 187
KS+H
Sbjct: 255 ----KSVH 258
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 152/290 (52%), Gaps = 3/290 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY++C +L A +F ++ +W S+I+G+A + E L + M+ + P+ T
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQV-QTSLLHMYSKCGSIQKAREVFDRV 119
LA++L A +G+L G+E YI D + SL+ MY+K G I A+ VFD +
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+D +TS+I+ Y G G A+ F M I PD + ++L ACSHS LV +G
Sbjct: 486 RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMD-RSGIKPDHVTMVAVLSACSHSNLVREG 544
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
F M FGI ++HY+C+ DL R G LD A D +P + + + LL AC
Sbjct: 545 HWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACL 604
Query: 240 IHGNVELGELAAAK-LSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLI 288
IHGN +GE AA K L + P G Y+L+A++Y G W + ++ L+
Sbjct: 605 IHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLL 654
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y+ + L A+ I + + + L W +I Y ++ E++ +++RM+ IR D T
Sbjct: 127 FYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFT 186
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+V+ ACA L + G+ + I + + V +L+ MY + G + AR +FDR++
Sbjct: 187 YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
++D W ++INCY EA L +M + + + + +I C +G
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG-VEASIVTWNTIAGGCLEAG 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 117/295 (39%), Gaps = 44/295 (14%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY + + ARR+FD + ++ +SW ++I Y EA L RM + + T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 61 LATV-----------------------------------LSACADLGSLSKGQEIEEYIY 85
T+ L AC+ +G+L G+ +
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 86 L---YGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNE 142
+ D+D V+ SL+ MYS+C ++ A VF +V L+ W S+I+ +A + E
Sbjct: 348 RSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 143 AINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCL 202
L +M + P+ I SIL + G ++ G +F + + + L
Sbjct: 407 TSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 203 ADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDL 257
D+ + G++ A M + ++ L+ +G + GE+A A D+
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKV-TYTSLIDG---YGRLGKGEVALAWFKDM 516
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 152/290 (52%), Gaps = 3/290 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY++C +L A +F ++ +W S+I+G+A + E L + M+ + P+ T
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQV-QTSLLHMYSKCGSIQKAREVFDRV 119
LA++L A +G+L G+E YI D + SL+ MY+K G I A+ VFD +
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+D +TS+I+ Y G G A+ F M I PD + ++L ACSHS LV +G
Sbjct: 486 RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMD-RSGIKPDHVTMVAVLSACSHSNLVREG 544
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
F M FGI ++HY+C+ DL R G LD A D +P + + + LL AC
Sbjct: 545 HWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACL 604
Query: 240 IHGNVELGELAAAK-LSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLI 288
IHGN +GE AA K L + P G Y+L+A++Y G W + ++ L+
Sbjct: 605 IHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLL 654
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y+ + L A+ I + + + L W +I Y ++ E++ +++RM+ IR D T
Sbjct: 127 FYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFT 186
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+V+ ACA L + G+ + I + + V +L+ MY + G + AR +FDR++
Sbjct: 187 YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
++D W ++INCY EA L +M + + + + +I C +G
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG-VEASIVTWNTIAGGCLEAG 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 117/295 (39%), Gaps = 44/295 (14%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY + + ARR+FD + ++ +SW ++I Y EA L RM + + T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 61 LATV-----------------------------------LSACADLGSLSKGQEIEEYIY 85
T+ L AC+ +G+L G+ +
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 86 L---YGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNE 142
+ D+D V+ SL+ MYS+C ++ A VF +V L+ W S+I+ +A + E
Sbjct: 348 RSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 143 AINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCL 202
L +M + P+ I SIL + G ++ G +F + + + L
Sbjct: 407 TSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 203 ADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDL 257
D+ + G++ A M + ++ L+ +G + GE+A A D+
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKV-TYTSLIDG---YGRLGKGEVALAWFKDM 516
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 152/306 (49%), Gaps = 36/306 (11%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAK + SA ++F+ K+++SWT+++ G +G EAL LF M I PD
Sbjct: 373 MYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIV 432
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
A+VLSA A+L L GQ++ G V SL+ MY+KCGS++ A +F+ +
Sbjct: 433 TASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME 492
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+DL WT +I Y + +GL+ED
Sbjct: 493 IRDLITWTCLIVGY------------------------------------AKNGLLEDAQ 516
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
++F SM +GI P +HY C+ DL GR G + M ++ A W +L+A R
Sbjct: 517 RYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRK 576
Query: 241 HGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRS 300
HGN+E GE AA L +L P ++ YV ++N+Y++ G+ EA +R L+ + + KE G S
Sbjct: 577 HGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCS 636
Query: 301 QVEVKA 306
VE K
Sbjct: 637 WVEEKG 642
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 4/242 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+ L+ A ++F KN +SW ++I+GY +SG EA +LF M I+P+ TL
Sbjct: 69 YSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTL 128
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT- 120
+VL C L L +G++I + G DLD V LL MY++C I +A +F+ +
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+K+ WTSM+ Y+ +G +AI F + E + + S+L AC+ G+
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN-QSNQYTFPSVLTACASVSACRVGV 247
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ + + G + + L D+ + +++ A ++GM +D +W+ ++ C
Sbjct: 248 QVHCCIVKS-GFKTNIYVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVR 305
Query: 241 HG 242
G
Sbjct: 306 QG 307
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 166/342 (48%), Gaps = 61/342 (17%)
Query: 1 MYAKCDNLTSARRIFDLTAG-KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MYA+C ++ A +F+ G KN ++WTSM+ GY+Q+G +A++ FR + R + +
Sbjct: 169 MYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQY 228
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T +VL+ACA + + G ++ I G + VQ++L+ MY+KC ++ AR + + +
Sbjct: 229 TFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM 288
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHK-----MTVEERIMPD-----AIVYTSILLA 169
D+ W SMI G+ EA+++F + M +++ +P A+ T + +A
Sbjct: 289 EVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIA 348
Query: 170 CS-HSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQA 228
S H +V+ G +K ++ L D+ + G +D A+ +GM ++
Sbjct: 349 SSAHCLIVKTGYATYKLVN------------NALVDMYAKRGIMDSALKVFEGM-IEKDV 395
Query: 229 QAWSCLLS----------ACRIHGNVELGEL------------AAAKLSDLSPGSS--GS 264
+W+ L++ A ++ N+ +G + A+A+L+ L G G+
Sbjct: 396 ISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGN 455
Query: 265 YVL------------MANLYTSLGKWKEAHIMRNLIDGKELV 294
Y+ + +YT G ++A+++ N ++ ++L+
Sbjct: 456 YIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLI 497
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 168/307 (54%), Gaps = 2/307 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRM-VRTDIRPDGA 59
MYAKC +L + IF+ ++++SW ++I+GYAQ+ +AL LF M +T + D
Sbjct: 390 MYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSF 449
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T+ ++L AC+ G+L G+ I + + V T+L+ MYSKCG ++ A+ FD +
Sbjct: 450 TVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSI 509
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+ KD+ W +I Y HG G+ A+ ++ + + + P+ +++ ++L +CSH+G+V+ G
Sbjct: 510 SWKDVVSWGILIAGYGFHGKGDIALEIYSEF-LHSGMEPNHVIFLAVLSSCSHNGMVQQG 568
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
LK F SM DFG+ P +H C+ DLL R +++ A + +L ACR
Sbjct: 569 LKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACR 628
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
+G E+ ++ + +L PG +G YV + + + ++ +W + N + L K G
Sbjct: 629 ANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGW 688
Query: 300 SQVEVKA 306
S++E+
Sbjct: 689 SKIEMNG 695
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 6/275 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC ++ R+ + K+++ WT MI+G + G +AL +F M+++
Sbjct: 289 MYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+A+V+++CA LGS G + Y+ +G LD SL+ MY+KCG + K+ +F+R+
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++DL W ++I+ YA + +A+ LF +M + D+ S+L ACS +G + G
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK 468
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+ F I P T L D+ + G L+ A + +W L++
Sbjct: 469 LIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGF 526
Query: 241 HGNVELGELAAAKLSD-LSPGSSGSYVLMANLYTS 274
HG G++A S+ L G ++V+ + +S
Sbjct: 527 HGK---GDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 83/150 (55%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y KCD++ A+ +FD ++++SW +MI+GYA G+ +E L L RM +RPD T
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
LS + L G+ + I G D+D ++T+L+ MY KCG + + V + +
Sbjct: 248 FGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIP 307
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKM 150
+KD+ WT MI+ G +A+ +F +M
Sbjct: 308 NKDVVCWTVMISGLMRLGRAEKALIVFSEM 337
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YAK L AR++F+ ++++ WT+MI Y+++G EA L M I+P T
Sbjct: 90 LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT 149
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L +LS ++ L Q + ++ +YG D D V S+L++Y KC + A+++FD++
Sbjct: 150 LLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME 206
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKM 150
+D+ W +MI+ YA G +E + L ++M
Sbjct: 207 QRDMVSWNTMISGYASVGNMSEILKLLYRM 236
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
+ S I + G + L F M+ + PD T ++L ACA L LS G I + +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAIN 145
+ G D + +SL+++Y+K G + AR+VF+ + ++D+ WT+MI CY+ G+ EA +
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 146 LFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
L ++M + I P + +L SG++E
Sbjct: 134 LVNEMRFQG-IKPGPVTLLEML-----SGVLE 159
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 167/311 (53%), Gaps = 7/311 (2%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y + +++ A +F K+ ++WT MI+G Q+ AEA L MVR ++P +T
Sbjct: 410 YLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTY 469
Query: 62 ATVLSACADLGSLSKGQEIEEYI--YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ +LS+ +L +G+ I I D D +Q SL+ MY+KCG+I+ A E+F ++
Sbjct: 470 SVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM 529
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
KD W SMI + HG+ ++A+NLF +M ++ P+++ + +L ACSHSGL+ G
Sbjct: 530 VQKDTVSWNSMIMGLSHHGLADKALNLFKEM-LDSGKKPNSVTFLGVLSACSHSGLITRG 588
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
L+ FK+M E + I P + HY + DLLGR G+L A + I +P + LL C
Sbjct: 589 LELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCG 648
Query: 240 IHGNVE----LGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVK 295
++ + + E AA +L +L P ++ +V + N+Y LG+ MR + K + K
Sbjct: 649 LNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKK 708
Query: 296 ECGRSQVEVKA 306
G S V V
Sbjct: 709 TPGCSWVVVNG 719
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVR--TDIRPDGA 59
Y + ++ A R+F +NI+SWT+MI+G+A + EAL LF M + + P+G
Sbjct: 241 YCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGE 300
Query: 60 TLATVLSACADLGSLSK--GQEIEEYIYLYG---LDLDQQVQTSLLHMYSKCGSIQKARE 114
TL ++ AC LG + G+++ + G +D D ++ SL+HMY+ G I A+
Sbjct: 301 TLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQS 360
Query: 115 VFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
+ + DL +IN Y +G A LF ++ + + D + +TS++ +G
Sbjct: 361 LLNE--SFDLQSCNIIINRYLKNGDLERAETLFERV----KSLHDKVSWTSMIDGYLEAG 414
Query: 175 LVEDGLKFFKSMHEDFGIAPTV 196
V F+ +H+ G+ TV
Sbjct: 415 DVSRAFGLFQKLHDKDGVTWTV 436
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + A IF K+ +SW SMI G + G +AL+LF+ M+ + +P+ T
Sbjct: 512 MYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVT 571
Query: 61 LATVLSACADLGSLSKGQEI-----EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKARE 114
VLSAC+ G +++G E+ E Y G+D S++ + + G +++A E
Sbjct: 572 FLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDH----YISMIDLLGRAGKLKEAEE 626
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YAK L AR +F++ +NI++ +M+ GY + EA LFR M + + +
Sbjct: 87 YAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVV-----SW 141
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+L+A D G E+ + + + + T L+ + G ++KA++VFD +
Sbjct: 142 TVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLI----RNGDMEKAKQVFDAMPS 197
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+D+ W +MI Y + EA LF M+ + + + +TS++ G V + +
Sbjct: 198 RDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK-----NVVTWTSMVYGYCRYGDVREAYR 252
Query: 182 FFKSMHE 188
F M E
Sbjct: 253 LFCEMPE 259
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 91/179 (50%), Gaps = 17/179 (9%)
Query: 3 AKCDNLTS--ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
A CD+ S A +FD +N++SW +++ G ++G +A +F M D
Sbjct: 147 ALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRD------- 199
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ---VQTSLLHMYSKCGSIQKAREVFD 117
V+S A + + +EE L+G D+ ++ TS+++ Y + G +++A +F
Sbjct: 200 ---VVSWNAMIKGYIENDGMEEAKLLFG-DMSEKNVVTWTSMVYGYCRYGDVREAYRLFC 255
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVE-ERIMPDAIVYTSILLACSHSGL 175
+ ++++ WT+MI+ +A + + EA+ LF +M + + + P+ S+ AC G+
Sbjct: 256 EMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 97 TSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERI 156
TSLL Y+K G + +AR +F+ + ++++ +M+ Y NEA LF R
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF-------RE 133
Query: 157 MPDAIV-YTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
MP +V +T +L A G ED ++ F M E V + L L R G ++ A
Sbjct: 134 MPKNVVSWTVMLTALCDDGRSEDAVELFDEMPER-----NVVSWNTLVTGLIRNGDMEKA 188
Query: 216 VDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKL--SDLSPGSSGSYVLMANLYT 273
MP +W+ + I G +E + AKL D+S + ++ M Y
Sbjct: 189 KQVFDAMP-SRDVVSWNAM-----IKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYC 242
Query: 274 SLGKWKEAH 282
G +EA+
Sbjct: 243 RYGDVREAY 251
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 161/302 (53%), Gaps = 4/302 (1%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
++ +A ++FD KNI+SW MI+ Y + +P ++ LFR MVR + + +TL +L+
Sbjct: 199 DVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLN 258
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI 126
AC L +G+ + + L+ + T+L+ MY KC + AR +FD ++ ++
Sbjct: 259 ACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVT 318
Query: 127 WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSM 186
W MI + +HG + LF M + + PD + + +L C+ +GLV G ++ M
Sbjct: 319 WNVMILAHCLHGRPEGGLELFEAM-INGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM 377
Query: 187 HEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMP---LDVQAQAWSCLLSACRIHGN 243
++F I P H C+A+L G + A +A++ +P + ++ W+ LLS+ R GN
Sbjct: 378 VDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
Query: 244 VELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVE 303
LGE A L + P + Y L+ N+Y+ G+W++ + +R ++ +++ + G V+
Sbjct: 438 PTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVD 497
Query: 304 VK 305
+K
Sbjct: 498 LK 499
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC + ARRIFD + +N ++W MI + G P L+LF M+ +RPD T
Sbjct: 294 MYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVT 353
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQ-QVQTSLLH------MYSKCGSIQKAR 113
VL CA G +S+GQ Y L +D+ Q++ + H +YS G ++A
Sbjct: 354 FVGVLCGCARAGLVSQGQS------YYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAE 407
Query: 114 EVFDRVTDKDLT 125
E + D+D+T
Sbjct: 408 EALKNLPDEDVT 419
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 45/266 (16%)
Query: 29 MIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA-----CADLGSLSKGQEIEEY 83
+ Y S P +AL + ++R PD T +++S C D G + GQ I+
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK-- 146
Query: 84 IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMI-------NCYAI 136
+G D VQ SL+HMY+ CG++ A+++F + +D+ W S+I + A
Sbjct: 147 ---HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAA 203
Query: 137 HGMGNE------------------------AINLFHKMTVEERIMPDAIVYTSILLACSH 172
H + +E +I+LF +M V + +L AC
Sbjct: 204 HKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM-VRAGFQGNESTLVLLLNACGR 262
Query: 173 SGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWS 232
S +++G S+ F + +V T L D+ G+ ++ LA + + + W+
Sbjct: 263 SARLKEGRSVHASLIRTF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV-TWN 320
Query: 233 CLLSACRIHGNVELG-ELAAAKLSDL 257
++ A +HG E G EL A ++ +
Sbjct: 321 VMILAHCLHGRPEGGLELFEAMINGM 346
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 153/280 (54%), Gaps = 6/280 (2%)
Query: 11 ARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD---IRPDGATLATVLSA 67
A F +++SWT++I G+++ G A+AL +F M++ + I P+ AT +VLS+
Sbjct: 171 AFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSS 230
Query: 68 CA--DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT 125
CA D G + G++I Y+ + L + T+LL MY K G ++ A +FD++ DK +
Sbjct: 231 CANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVC 290
Query: 126 IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKS 185
W ++I+ A +G +A+ +F M + P+ I +IL AC+ S LV+ G++ F S
Sbjct: 291 AWNAIISALASNGRPKQALEMFEMMK-SSYVHPNGITLLAILTACARSKLVDLGIQLFSS 349
Query: 186 MHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
+ ++ I PT +HY C+ DL+GR G L A + IQ +P + A LL AC+IH N E
Sbjct: 350 ICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTE 409
Query: 246 LGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMR 285
LG +L L P G YV ++ W EA MR
Sbjct: 410 LGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMR 449
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 113/253 (44%), Gaps = 39/253 (15%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
+ ++I Y +G +L LF M+ + ++P+ T +++ A S+S G +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD---------------------------- 117
G D VQTS + Y + G ++ +R++FD
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 118 ---RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEER--IMPDAIVYTSILLACSH 172
R+ D+ WT++IN ++ G+ +A+ +F +M ER I P+ + S+L +C++
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 173 SGLVEDGLKFFKSMH---EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ 229
+ G++ K +H I T T L D+ G+ G L++A+ + D +
Sbjct: 234 --FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR-DKKVC 290
Query: 230 AWSCLLSACRIHG 242
AW+ ++SA +G
Sbjct: 291 AWNAIISALASNG 303
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY K +L A IFD K + +W ++I+ A +G P +AL++F M + + P+G T
Sbjct: 267 MYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGIT 326
Query: 61 LATVLSACA-----DLG 72
L +L+ACA DLG
Sbjct: 327 LLAILTACARSKLVDLG 343
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 156/285 (54%), Gaps = 4/285 (1%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N++SWT+M+ G Q+G EA+ R+M + +RP+ ++ LSACA L SL G+ I
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIH 569
Query: 82 EYIYLYGLDLDQ--QVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGM 139
YI + L ++TSL+ MY+KCG I KA +VF +L + +MI+ YA++G
Sbjct: 570 GYI-IRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGN 628
Query: 140 GNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHY 199
EAI L+ + + PD I T++L AC+H+G + ++ F + + P ++HY
Sbjct: 629 LKEAIALYRSLE-GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHY 687
Query: 200 TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSP 259
+ DLL G+ + A+ I+ MP A+ L+++C EL + + KL + P
Sbjct: 688 GLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEP 747
Query: 260 GSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQVEV 304
+SG+YV ++N Y G W E MR ++ K L K+ G S +++
Sbjct: 748 ENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQI 792
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 135/250 (54%), Gaps = 5/250 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y K + A +FD K++++W +I+GY Q G +A+ + + M ++ D T
Sbjct: 318 FYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVT 377
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
LAT++SA A +L G+E++ Y + + D + ++++ MY+KCGSI A++VFD
Sbjct: 378 LATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTV 437
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+KDL +W +++ YA G+ EA+ LF+ M + E + P+ I + I+L+ +G V++
Sbjct: 438 EKDLILWNTLLAAYAESGLSGEALRLFYGMQL-EGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMP---LDVQAQAWSCLLSA 237
F M GI P + +T + + + + G + A+ ++ M L A + + LSA
Sbjct: 497 DMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 555
Query: 238 CRIHGNVELG 247
C ++ +G
Sbjct: 556 CAHLASLHIG 565
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 126/248 (50%), Gaps = 25/248 (10%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC L A ++FD +N ++W +++ GY Q+G EA+ LF M + + P T
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVT 276
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++T LSA A++G + +G++ + G++LD + TSLL+ Y K G I+ A VFDR+
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 336
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+KD+ W +I+ Y G+ +AI + M + E++ D + +++ A + + + L
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRL-EKLKYDCVTLATLMSAAART----ENL 391
Query: 181 KFFK---------SMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQ-- 229
K K S D +A TV D+ + G + VDA + V+
Sbjct: 392 KLGKEVQCYCIRHSFESDIVLASTV------MDMYAKCGSI---VDAKKVFDSTVEKDLI 442
Query: 230 AWSCLLSA 237
W+ LL+A
Sbjct: 443 LWNTLLAA 450
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 114/250 (45%), Gaps = 13/250 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
YAKCD L A +F +N+ SW ++I + G AL F M+ +I PD
Sbjct: 116 FYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFV 175
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ V AC L G+ + Y+ GL+ V +SL MY KCG + A +VFD +
Sbjct: 176 VPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIP 235
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG- 179
D++ W +++ Y +G EAI LF M ++ + P + ++ L A ++ G VE+G
Sbjct: 236 DRNAVAWNALMVGYVQNGKNEEAIRLFSDMR-KQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 180 ----LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
+ M D + ++ ++ C +VG ++ A M + W+ ++
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYC------KVGLIEYAEMVFDRM-FEKDVVTWNLII 347
Query: 236 SACRIHGNVE 245
S G VE
Sbjct: 348 SGYVQQGLVE 357
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
S+ ++ ++G EAL L M ++R +L C LS G++I I
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96
Query: 85 YLYG--LDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNE 142
G ++ ++T L+ Y+KC +++ A +F ++ +++ W ++I G+
Sbjct: 97 LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG 156
Query: 143 AINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHE---DFGIAPTVKHY 199
A+ F +M +E I PD V ++ AC G ++ +F + +H G+ V
Sbjct: 157 ALMGFVEM-LENEIFPDNFVVPNVCKAC---GALKWS-RFGRGVHGYVVKSGLEDCVFVA 211
Query: 200 TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
+ LAD+ G+ G LD A +P D A AW+ L+
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALM 246
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC ++ A ++F + +MI+ YA G+ EA+ L+R + ++PD T
Sbjct: 591 MYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNIT 650
Query: 61 LATVLSACADLGSLSKGQEI 80
+ VLSAC G +++ EI
Sbjct: 651 ITNVLSACNHAGDINQAIEI 670
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 162/307 (52%), Gaps = 3/307 (0%)
Query: 1 MYAKCDNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
M++KC+ L + ++F +L ++L SMI Y+ +AL LF + +RPD
Sbjct: 279 MFSKCNRLDDSVKLFRELEKWDSVLC-NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKF 337
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T ++VLS+ + L G ++ + G DLD V TSL+ MY K GS+ A VF +
Sbjct: 338 TFSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKT 396
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
KDL W ++I A + E++ +F+++ + + + PD + IL+AC ++G V +G
Sbjct: 397 DGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEG 456
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
++ F SM + G+ P +HY C+ +LL RVG ++ A D +P + + W +L A
Sbjct: 457 IQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASL 516
Query: 240 IHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGR 299
G+ L E A + + P SS Y+++ +Y +W+ + +R ++ +L G
Sbjct: 517 DLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGS 576
Query: 300 SQVEVKA 306
S++ +++
Sbjct: 577 SKISIES 583
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY + A +F ++++SW +I + SG+ ALD F M +I+PD T
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYT 237
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++ V+S C+DL LSKG++ G + V + + M+SKC + + ++F +
Sbjct: 238 VSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE 297
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D + SMI Y+ H G +A+ LF + + + + PD ++S+L S + ++ D
Sbjct: 298 KWDSVLCNSMIGSYSWHCCGEDALRLF-ILAMTQSVRPDKFTFSSVL--SSMNAVMLDHG 354
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAV 216
S+ G T L ++ + G +DLA+
Sbjct: 355 ADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAM 390
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 25/197 (12%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y K ++ +A ++FD KN ++W + G ++G+ ALDLF M D+ +
Sbjct: 48 LYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDV----VS 103
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQ------QVQTSLLHMYSKC---GSIQK 111
T++S G EY D+ + + S+L C G
Sbjct: 104 WNTMISGLVSCG-------FHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIH 156
Query: 112 AREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS 171
+ V+ +L +W S+++ Y G+ + A+++F +T+E+R D + + ++L+CS
Sbjct: 157 GNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVF--LTMEDR---DVVSWNCLILSCS 211
Query: 172 HSGLVEDGLKFFKSMHE 188
SG E L F M E
Sbjct: 212 DSGNKEVALDQFWLMRE 228
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 11/311 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC+ + ++ ++ N+ S++ G + +++F M+ D T
Sbjct: 360 MYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVT 419
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLY------GLDLDQQVQTSLLHMYSKCGSIQKARE 114
L+TVL A SLS + + ++ G D V SL+ Y+K G + +R+
Sbjct: 420 LSTVLKAL----SLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRK 475
Query: 115 VFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
VFD + ++ TS+IN YA +GMG + + + +M ++PD + S+L CSHSG
Sbjct: 476 VFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMD-RMNLIPDEVTILSVLSGCSHSG 534
Query: 175 LVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCL 234
LVE+G F S+ +GI+P K Y C+ DLLGR G ++ A + D AWS L
Sbjct: 535 LVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSL 594
Query: 235 LSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELV 294
L +CRIH N +G AA L +L P + Y+ ++ Y +G ++ + +R + +EL+
Sbjct: 595 LQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELM 654
Query: 295 KECGRSQVEVK 305
+E G S V VK
Sbjct: 655 REIGYSSVVVK 665
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 4 KCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLAT 63
K NL SA FD + ++++++ +I+G ++ G A++L+ MV +R +T +
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 64 VLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKD 123
VLS C+D +G ++ + G + V+++L+ +Y+ + A ++FD + D++
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 124 LTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFF 183
L + ++ C+ G ++ +M +E + + + Y ++ CSH LV +G +
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEG-VAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 184 KSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGN 243
+ + + L D G L ++ + +P + +W+ ++S C +G+
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVCADYGS 295
Query: 244 V 244
V
Sbjct: 296 V 296
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y+ C +L+ + R F+ K+++SW S+++ A G ++LDLF +M RP
Sbjct: 259 YSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPF 318
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQ-QVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ L+ C+ + G++I Y+ G D+ VQ++L+ MY KC I+ + ++ +
Sbjct: 319 MSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
+L S++ G+ + I +F M ++E D + +++L A S S
Sbjct: 379 CLNLECCNSLMTSLMHCGITKDIIEMFGLM-IDEGTGIDEVTLSTVLKALSLS 430
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+YA + A ++FD +N+ ++ + Q+G +++ RM + +G T
Sbjct: 156 LYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLT 215
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ-VQTSLLHMYSKCGSIQKAREVFDRV 119
++ C+ + +G+++ + G ++ V L+ YS CG + + F+ V
Sbjct: 216 YCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAV 275
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+KD+ W S+++ A +G ++++LF KM + P + S L CS + ++ G
Sbjct: 276 PEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGK-RPSIRPFMSFLNFCSRNSDIQSG 334
Query: 180 LKFFKSMH---EDFGIAPTVKHY-TCLADLLGRVGQLDLAVDAIQGMP 223
K +H G + H + L D+ G+ ++ + Q +P
Sbjct: 335 ----KQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 156/290 (53%), Gaps = 11/290 (3%)
Query: 21 KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEI 80
+N +W +IAGY Q+G EAL+LFR+M + P+ T+ ++L ACA+L +EI
Sbjct: 487 RNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREI 546
Query: 81 EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMG 140
+ LD V+ +L Y+K G I+ +R +F + KD+ W S+I Y +HG
Sbjct: 547 HGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSY 606
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
A+ LF++M + I P+ +SI+LA G V++G K F S+ D+ I P ++H +
Sbjct: 607 GPALALFNQMKTQG-ITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCS 665
Query: 201 CLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLSPG 260
+ L GR +L+ A+ IQ M + + W L+ CRIHG++++ AA L L P
Sbjct: 666 AMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPE 725
Query: 261 SSGSYVLMANLY---TSLGKWKEAHIMR--NLIDGKELVKECGRSQVEVK 305
++ + +++ +Y LG+ E + R NL L K G+S +EV+
Sbjct: 726 NTATESIVSQIYALGAKLGRSLEGNKPRRDNL-----LKKPLGQSWIEVR 770
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 147/302 (48%), Gaps = 16/302 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC + AR++FD +N+ +W++MI Y++ E LFR M++ + PD
Sbjct: 124 MYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFL 183
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+L CA+ G + G+ I + G+ +V S+L +Y+KCG + A + F R+
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR 243
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++D+ W S++ Y +G EA+ L +M +E I P + + ++ + G + +
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEME-KEGISPGLVTWNILIGGYNQLGKCDAAM 302
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPL-DVQAQAWSCL--LSA 237
+ M E FGI V +T + L G A+D + M L V A + + +SA
Sbjct: 303 DLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA 361
Query: 238 CR----IHGNVELGELAAAK--LSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGK 291
C I+ E+ +A + D+ G+S + ++Y+ GK ++A + + + K
Sbjct: 362 CSCLKVINQGSEVHSIAVKMGFIDDVLVGNS-----LVDMYSKCGKLEDARKVFDSVKNK 416
Query: 292 EL 293
++
Sbjct: 417 DV 418
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 6/223 (2%)
Query: 3 AKCD---NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
KCD +L F +TA ++ +WT+MI+G +G +ALD+FR+M + P+
Sbjct: 296 GKCDAAMDLMQKMETFGITA--DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
T+ + +SAC+ L +++G E+ G D V SL+ MYSKCG ++ AR+VFD V
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+KD+ W SMI Y G +A LF +M + + P+ I + +++ +G +
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ-DANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
+ F+ M +D + + + + G+ D A++ + M
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 43/248 (17%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC L AR++FD K++ +W SMI GY Q+G+ +A +LF RM ++RP+ T
Sbjct: 396 MYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIIT 455
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
T++S G + G E E +DL Q+++ K G +Q
Sbjct: 456 WNTMIS-----GYIKNGDEGE------AMDLFQRME--------KDGKVQ---------- 486
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++ W +I Y +G +EA+ LF KM R MP+++ S+L AC++ L+ G
Sbjct: 487 -RNTATWNLIIAGYIQNGKKDEALELFRKMQF-SRFMPNSVTILSLLPACAN--LL--GA 540
Query: 181 KFFKSMH-----EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
K + +H + VK+ L D + G ++ + GM W+ L+
Sbjct: 541 KMVREIHGCVLRRNLDAIHAVKN--ALTDTYAKSGDIEYSRTIFLGMETK-DIITWNSLI 597
Query: 236 SACRIHGN 243
+HG+
Sbjct: 598 GGYVLHGS 605
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 7/221 (3%)
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
+T +L +C D GS+ G+ + L+ + D V+T LL MY+KCG I AR+VFD
Sbjct: 82 STYLKLLESCIDSGSIHLGRILHARFGLF-TEPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ +++L W++MI Y+ E LF ++ +++ ++PD ++ IL C++ G VE
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLF-RLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAW-SCLLSA 237
G K S+ G++ ++ + + + G+LD A + M + AW S LL+
Sbjct: 200 G-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR-ERDVIAWNSVLLAY 257
Query: 238 CRIHGNVELGELAAAKLSD-LSPGSSGSYVLMANLYTSLGK 277
C+ + E EL + +SPG +L+ Y LGK
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG-YNQLGK 297
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 16/157 (10%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
YAK ++ +R IF K+I++W S+I GY G AL LF +M I P+ TL
Sbjct: 569 YAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTL 628
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLH------MYSKCGSIQKAREV 115
++++ A +G++ +G+++ Y + D + +L H +Y + +++A +
Sbjct: 629 SSIILAHGLMGNVDEGKKV-----FYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQF 683
Query: 116 FDRVTDKDLT-IWTSMINCYAIHGMGNEAI----NLF 147
+ + T IW S + IHG + AI NLF
Sbjct: 684 IQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLF 720
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+ +SW IA ++S + E ++LF+ M++++IRPD T ++LS C+ L L+ G I
Sbjct: 509 DTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIH 568
Query: 82 EYIYLYGLDL-DQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMG 140
I D V L+ MY KCGSI+ +VF+ +K+L WT++I+C IHG G
Sbjct: 569 GLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYG 628
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
EA+ F K T+ PD + + SIL AC H G+V++G+ F+ M +D+G+ P + HY
Sbjct: 629 QEALEKF-KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYR 686
Query: 201 CLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
C DLL R G L A I+ MP A W L C
Sbjct: 687 CAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 14/238 (5%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y KC N A R+F +I+SW ++I A+S +P +AL LF M P+ T
Sbjct: 260 YGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTY 319
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+VL + + LS G++I + G + + +L+ Y+KCG+++ +R FD + D
Sbjct: 320 VSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRD 379
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS-------HSG 174
K++ W ++++ YA + G ++LF +M ++ P +++ L +C HS
Sbjct: 380 KNIVCWNALLSGYA-NKDGPICLSLFLQM-LQMGFRPTEYTFSTALKSCCVTELQQLHSV 437
Query: 175 LVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWS 232
+V G + D+ ++ ++ Y + + LD A +PL++ A +S
Sbjct: 438 IVRMGYE-----DNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYS 490
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 13/223 (5%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
YAKC NL +R FD KNI+ W ++++GYA P L LF +M++ RP T
Sbjct: 360 FYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYT 418
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+T L +C +++ Q++ I G + + V +SL+ Y+K + A + D +
Sbjct: 419 FSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWAS 474
Query: 121 DKDLTIWTSMI-NCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+ +++ Y+ G +E++ L T+E+ PD + + + ACS S E+
Sbjct: 475 GPTSVVPLNIVAGIYSRRGQYHESVKLIS--TLEQ---PDTVSWNIAIAACSRSDYHEEV 529
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
++ FK M + I P + + L ++ L L +I G+
Sbjct: 530 IELFKHMLQS-NIRPDKYTFVSILSLCSKLCDLTLG-SSIHGL 570
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC ++ S ++F+ T KN+++WT++I+ G+ EAL+ F+ + +PD +
Sbjct: 590 MYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVS 649
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++L+AC G + +G + + + YG++ + + + ++ G +++A + +
Sbjct: 650 FISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMP 709
Query: 121 -DKDLTIWTSMIN 132
D +W + ++
Sbjct: 710 FPADAPVWRTFLD 722
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 9/240 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y + D L A ++F+ K++ +W M++ G E + FR +VR ++
Sbjct: 158 LYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESS 217
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
VL + + L +++ GLD + V SL+ Y KCG+ A +F
Sbjct: 218 FLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAG 277
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
D+ W ++I A +A+ LF M E P+ Y S+L S L+ G
Sbjct: 278 SWDIVSWNAIICATAKSENPLKALKLFVSMP-EHGFSPNQGTYVSVLGVSSLVQLLSCGR 336
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLD---LAVDAIQGMPLDVQAQAWSCLLSA 237
+ + ++ G + L D + G L+ L D I+ D W+ LLS
Sbjct: 337 QIHGMLIKN-GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR----DKNIVCWNALLSG 391
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y K ++ A ++FD +N +S+ ++I GY++ G +A +F M P+ +T
Sbjct: 58 LYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQST 117
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDL-DQQVQTSLLHMYSKCGSIQKAREVFDRV 119
++ +LS CA L + G ++ YGL + D V T LL +Y + ++ A +VF+ +
Sbjct: 118 VSGLLS-CASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM 175
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMT 151
K L W M++ G E + F ++
Sbjct: 176 PFKSLETWNHMMSLLGHRGFLKECMFFFRELV 207
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 162/307 (52%), Gaps = 12/307 (3%)
Query: 1 MYAKCDNLTSARRIFD-LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
Y+ + A ++++ L + + S+I+G ++ + EA L R RP+
Sbjct: 228 FYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVR 282
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
L++ L+ C+D L G++I G D ++ L+ MY KCG I +AR +F +
Sbjct: 283 VLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAI 342
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVE-ERIMPDAIVYTSILLACSHSGLVED 178
K + WTSMI+ YA++G G +A+ +F +M E ++P+++ + ++ AC+H+GLV++
Sbjct: 343 PSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKE 402
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLD----VQAQAWSCL 234
G + F M E + + P +HY C D+L + G+ + ++ M + + W +
Sbjct: 403 GKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAV 462
Query: 235 LSACRIHGNVELGELAAAKL-SDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKEL 293
LSAC ++ ++ GE A +L + P ++ YVL++N Y ++GKW +R + K L
Sbjct: 463 LSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGL 522
Query: 294 VKECGRS 300
VK G S
Sbjct: 523 VKTAGHS 529
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 118/244 (48%), Gaps = 10/244 (4%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+K +L + R+F+ K+++SW ++++G+ ++G EAL +F M R + T
Sbjct: 128 MYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT 187
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
L++V+ CA L L +G+++ + + G DL + T+++ YS G I +A +V++ +
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 121 -DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
D + S+I+ + EA L R P+ V +S L CS + + G
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLM------SRQRPNVRVLSSSLAGCSDNSDLWIG 300
Query: 180 LKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
K + G K L D+ G+ GQ+ A + +P +W+ ++ A
Sbjct: 301 -KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP-SKSVVSWTSMIDAYA 358
Query: 240 IHGN 243
++G+
Sbjct: 359 VNGD 362
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Query: 9 TSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSAC 68
T A +FD +++ S S ++ + +SG+P + L LF ++ R T VL AC
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC 94
Query: 69 ADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWT 128
+ L G+++ + G + +T+L+ MYSK G + + VF+ V +KDL W
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 129 SMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++++ + +G G EA+ +F M ER+ +S++ C+ +++ G
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAM-YRERVEISEFTLSSVVKTCASLKILQQG 204
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 154/310 (49%), Gaps = 12/310 (3%)
Query: 1 MYAKCDNLTSARRIFD-----LTAGKNILSWTSMIAGYAQSGHPAEALDLFRR-MVRTDI 54
M +C+ + A +FD L + K + TS+I GYA++G P +A+ LF R + +
Sbjct: 461 MCTRCERMADAEEMFDQWPSNLDSSK---ATTSIIGGYARNGLPDKAVSLFHRTLCEQKL 517
Query: 55 RPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKARE 114
D +L +L+ C LG G +I Y G D + SL+ MY+KC A +
Sbjct: 518 FLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIK 577
Query: 115 VFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC--SH 172
+F+ + + D+ W S+I+CY + G+EA+ L+ +M E+ I PD I T ++ A +
Sbjct: 578 IFNTMREHDVISWNSLISCYILQRNGDEALALWSRMN-EKEIKPDIITLTLVISAFRYTE 636
Query: 173 SGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWS 232
S + F SM + I PT +HYT +LG G L+ A D I MP+ +
Sbjct: 637 SNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLR 696
Query: 233 CLLSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKE 292
LL +CRIH N + + A + P + Y+L +N+Y++ G W + ++R + +
Sbjct: 697 ALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERG 756
Query: 293 LVKECGRSQV 302
K +S +
Sbjct: 757 YRKHPAKSWI 766
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 10 SARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACA 69
SA IF KN +++ +++AG+ ++GH +AL LF M++ + +L + + AC
Sbjct: 369 SAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACG 428
Query: 70 DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK--DLTIW 127
+ ++I + +G + +QT+LL M ++C + A E+FD+
Sbjct: 429 LVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKAT 488
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
TS+I YA +G+ ++A++LFH+ E+++ D + T IL C G E G +
Sbjct: 489 TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 11/236 (4%)
Query: 3 AKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGATL 61
+ CD++ ++FD +++ SW ++++ + G +A DLF M R + D TL
Sbjct: 232 SSCDDVL---KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTL 288
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+T+LS+C D L +G+E+ GL + V +L+ YSK ++K +++ +
Sbjct: 289 STLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMA 348
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
+D +T MI Y GM + A+ +F +T + + I Y +++ +G LK
Sbjct: 349 QDAVTFTEMITAYMSFGMVDSAVEIFANVTEK-----NTITYNALMAGFCRNGHGLKALK 403
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
F M + G+ T T D G V + ++ + I G + C+ +A
Sbjct: 404 LFTDMLQR-GVELTDFSLTSAVDACGLVSEKKVS-EQIHGFCIKFGTAFNPCIQTA 457
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
Query: 14 IFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGATLATVLSACADLG 72
+F + ++S+T++I+G+++ EAL +F RM + ++P+ T +L+AC +
Sbjct: 136 VFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVS 195
Query: 73 SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSK--CGSIQKAREVFDRVTDKDLTIWTSM 130
S G +I I G V SL+ +Y K S ++FD + +D+ W ++
Sbjct: 196 RFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTV 255
Query: 131 INCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
++ G ++A +LF++M E D+ +++L +C+ S ++ G
Sbjct: 256 VSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRG 304
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 125/206 (60%), Gaps = 8/206 (3%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRPDGAT 60
Y + +++SAR++FD +N++SW S+IAGYA +G A A++ F M+ D +PD T
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT 400
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ +VLSAC + L G I +YI + L+ SL+ MY++ G++ +A+ VFD +
Sbjct: 401 MISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK 460
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++D+ + ++ +A +G G E +NL KM +E I PD + YTS+L AC+ +GL+++G
Sbjct: 461 ERDVVSYNTLFTAFAANGDGVETLNLLSKMK-DEGIEPDRVTYTSVLTACNRAGLLKEGQ 519
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLL 206
+ FKS+ P HY C+ DLL
Sbjct: 520 RIFKSIRN-----PLADHYACM-DLL 539
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
+AK +L +AR+ FD K+++SW +M++GYAQ+G +AL LF M+R +RP+ T
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 267
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV-T 120
V+SAC+ S + + + I + L+ V+T+LL M++KC IQ AR +F+ + T
Sbjct: 268 VIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT 327
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
++L W +MI+ Y G + A LF M + + + S++ +H+G +
Sbjct: 328 QRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR-----NVVSWNSLIAGYAHNGQAALAI 382
Query: 181 KFFKSMHEDFG 191
+FF+ M D+G
Sbjct: 383 EFFEDMI-DYG 392
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 24/241 (9%)
Query: 12 RRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADL 71
R IFD N+ SM +++ + L L+ + R I PD + V+ +
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF 119
Query: 72 GSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMI 131
G L + + G D V+ ++ MY K S++ AR+VFD+++ + + W MI
Sbjct: 120 GIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 132 NCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFG 191
+ Y G EA LF M D + +T ++ + +E+ K+F M E
Sbjct: 175 SGYWKWGNKEEACKLFDMMPEN-----DVVSWTVMITGFAKVKDLENARKYFDRMPE--- 226
Query: 192 IAPTVKHYTCLADLLGRVGQLDLAVDAIQ----GMPLDVQAQ--AWSCLLSACRIHGNVE 245
K +L Q DA++ + L V+ W ++SAC +
Sbjct: 227 -----KSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPS 281
Query: 246 L 246
L
Sbjct: 282 L 282
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYA+ NL A+R+FD ++++S+ ++ +A +G E L+L +M I PD T
Sbjct: 442 MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVT 501
Query: 61 LATVLSACADLGSLSKGQEIEEYI 84
+VL+AC G L +GQ I + I
Sbjct: 502 YTSVLTACNRAGLLKEGQRIFKSI 525
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 157/307 (51%), Gaps = 3/307 (0%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
+ K + +A ++ N SW +++ GY S EA + F +M + +R D +L
Sbjct: 264 FVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSL 323
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
+ VL+A A L + G I + GLD V ++L+ MYSKCG ++ A +F +
Sbjct: 324 SIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPR 383
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGL-VEDGL 180
K+L +W MI+ YA +G EAI LF+++ E + PD + ++L CSH + +E L
Sbjct: 384 KNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVML 443
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRI 240
+F+ M ++ I P+V+H L +G+ G++ A IQ AW LL AC
Sbjct: 444 GYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSA 503
Query: 241 HGNVELGELAAAKLSDLSPGSSGS--YVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
+++ + AAK+ +L Y++M+NLY +W+E +R ++ ++KE G
Sbjct: 504 RKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVG 563
Query: 299 RSQVEVK 305
S ++ +
Sbjct: 564 SSWIDSR 570
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
Y D+L A ++FD +++SW S+++GY QSG E + LF + R+D+ P+ +
Sbjct: 99 FYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFS 158
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDL-DQQVQTSLLHMYSKCGSIQKAREVFDRV 119
L+ACA L G I + GL+ + V L+ MY KCG + A VF +
Sbjct: 159 FTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHM 218
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+KD W +++ + +G + FH+M PD + Y ++ A SG +
Sbjct: 219 EEKDTVSWNAIVASCSRNGKLELGLWFFHQMP-----NPDTVTYNELIDAFVKSGDFNNA 273
Query: 180 LKFFKSM 186
+ M
Sbjct: 274 FQVLSDM 280
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 33/261 (12%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFR---RMVRTDIRPD 57
M N + R TA N SW++++ A+ G ++ + R ++ +PD
Sbjct: 1 MLRTVSNAFTTRSHVGSTASSN--SWSTIVPALARFG----SIGVLRAAVELINDGEKPD 54
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
+ L +L + G +S +++ Y+ +G + ++ SL+ Y S++ A +VFD
Sbjct: 55 ASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFD 114
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACS------ 171
+ D D+ W S+++ Y G E I LF ++ + + P+ +T+ L AC+
Sbjct: 115 EMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSD-VFPNEFSFTAALAACARLHLSP 173
Query: 172 -----HSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDV 226
HS LV+ GL+ V CL D+ G+ G +D AV Q M +
Sbjct: 174 LGACIHSKLVKLGLE-----------KGNVVVGNCLIDMYGKCGFMDDAVLVFQHME-EK 221
Query: 227 QAQAWSCLLSACRIHGNVELG 247
+W+ ++++C +G +ELG
Sbjct: 222 DTVSWNAIVASCSRNGKLELG 242
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
MY+KC L A +F KN++ W MI+GYA++G EA+ LF ++ + ++PD
Sbjct: 364 MYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRF 423
Query: 60 TLATVLSACA 69
T +L+ C+
Sbjct: 424 TFLNLLAVCS 433
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 136/256 (53%), Gaps = 5/256 (1%)
Query: 1 MYAKCDNLTSARRIF-DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGA 59
MY KC L SA F ++ ++ +SW +++ G A+ G +AL F M + + +P
Sbjct: 439 MYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKY 497
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
TLAT+L+ CA++ +L+ G+ I ++ G +D ++ +++ MYSKC A EVF
Sbjct: 498 TLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEA 557
Query: 120 TDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVE-ERIMPDAIVYTSILLACSHSGLVED 178
+DL +W S+I +G E LF M +E E + PD + + IL AC G VE
Sbjct: 558 ATRDLILWNSIIRGCCRNGRSKEVFELF--MLLENEGVKPDHVTFLGILQACIREGHVEL 615
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSAC 238
G ++F SM + I+P V+HY C+ +L + G L + + MP D Q + + AC
Sbjct: 616 GFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDAC 675
Query: 239 RIHGNVELGELAAAKL 254
+ + +LG AA +L
Sbjct: 676 QRYRWSKLGAWAAKRL 691
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 45/224 (20%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDI------ 54
MY KCD L SARR+FD T K++ SWTS ++GYA SG EA +LF M +I
Sbjct: 307 MYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAM 366
Query: 55 -------------------------RPDGATLATVLSACADLGSLSKGQEIEEYIYLYGL 89
D TL +L+ C+ + + G++ +IY +G
Sbjct: 367 LGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGY 426
Query: 90 DLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD-KDLTIWTSMINCYAIHGMGNEAINLFH 148
D + V +LL MY KCG++Q A F ++++ +D W +++ A G +A++ F
Sbjct: 427 DTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFE 486
Query: 149 KMTVEERIMPDAIVYTSILLACS-----------HSGLVEDGLK 181
M VE + P ++L C+ H L+ DG K
Sbjct: 487 GMQVEAK--PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYK 528
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 5/189 (2%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y KC ++ ARR+FD + +SW ++ Y + G EA+ +F +M+ ++RP T
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHT 265
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+++V+ AC+ +L G+ I + D V TS+ MY KC ++ AR VFD+
Sbjct: 266 VSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTR 325
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
KDL WTS ++ YA+ G+ EA LF M ER + + + ++L H+ ++ L
Sbjct: 326 SKDLKSWTSAMSGYAMSGLTREARELFDLMP--ER---NIVSWNAMLGGYVHAHEWDEAL 380
Query: 181 KFFKSMHED 189
F M ++
Sbjct: 381 DFLTLMRQE 389
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 10/282 (3%)
Query: 2 YAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
Y KC + AR +F+ ++ SW ++I AQ+G E +FRRM R +R +
Sbjct: 106 YGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSF 165
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
A VL +C + L +++ + YG + ++TS++ +Y KC + AR VFD + +
Sbjct: 166 AGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN 225
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
W ++ Y G +EA+ +F KM +E + P +S++LACS S +E G K
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKM-LELNVRPLNHTVSSVMLACSRSLALEVG-K 283
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAI-QGMPLDVQAQAWSCLLSACRI 240
++ + T + D+ + +L+ A Q D+ ++W+ +S +
Sbjct: 284 VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDL--KSWTSAMSGYAM 341
Query: 241 HGNVELGELAAAKLSDLSPGSS-GSYVLMANLYTSLGKWKEA 281
G A +L DL P + S+ M Y +W EA
Sbjct: 342 SGLTR----EARELFDLMPERNIVSWNAMLGGYVHAHEWDEA 379
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%), Gaps = 27/204 (13%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
LT R+I + G N+ S++ S P L+ R+ R+
Sbjct: 30 LTVTRQILEHLEGGNVSKAVSVLFA---SPEPVSYW-LYERLFRS--------------- 70
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
C+ + + ++++ ++ + + + Y KCG + ARE+F+ + ++D W
Sbjct: 71 CSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSW 130
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
++I A +G+ +E +F +M + + + +L +C GL+ D L+ + +H
Sbjct: 131 NAVITACAQNGVSDEVFRMFRRMN-RDGVRATETSFAGVLKSC---GLILD-LRLLRQLH 185
Query: 188 ---EDFGIAPTVKHYTCLADLLGR 208
+G + V T + D+ G+
Sbjct: 186 CAVVKYGYSGNVDLETSIVDVYGK 209
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 117/215 (54%), Gaps = 1/215 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+KC R+FD +N+ +WT+MI Y ++ +++FR M+ + RPD T
Sbjct: 462 MYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVT 521
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ VL+ C+DL +L G+E+ +I + V ++ MY KCG ++ A FD V
Sbjct: 522 MGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVA 581
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
K WT++I Y + + +AIN F +M V P+ +T++L CS +G V++
Sbjct: 582 VKGSLTWTAIIEAYGCNELFRDAINCFEQM-VSRGFTPNTFTFTAVLSICSQAGFVDEAY 640
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
+FF M + + P+ +HY+ + +LL R G+++ A
Sbjct: 641 RFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 15/227 (6%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y KC ++ S RR+F + +N +SWT++++GYA +G +AL M + RPD T
Sbjct: 361 LYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVT 420
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ATVL CA+L ++ +G+EI Y + + TSL+ MYSKCG + +FDR+
Sbjct: 421 IATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE 480
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+++ WT+MI+CY + I +F M + + PD++ +L CS L
Sbjct: 481 QRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH-RPDSVTMGRVLTVCSDL----KAL 535
Query: 181 KFFKSMH-----EDFGIAPTVKHYTCLADLLGRVGQL---DLAVDAI 219
K K +H ++F P V + + G+ G L + + DA+
Sbjct: 536 KLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSANFSFDAV 580
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 23/308 (7%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTD-IRPDGA 59
MY KC + ARR+FD ++I+ W +MIAG A + EAL LFR M+ + I P+
Sbjct: 258 MYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSV 317
Query: 60 TLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ-VQTSLLHMYSKCGSIQKAREVFDR 118
L T+L D+ +L G+E+ ++ ++Q V + L+ +Y KCG + R VF
Sbjct: 318 ILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG 377
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
++ WT++++ YA +G ++A+ M +E PD + ++L C+ ++
Sbjct: 378 SKQRNAISWTALMSGYAANGRFDQALRSIVWMQ-QEGFRPDVVTIATVLPVCAELRAIKQ 436
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWS----CL 234
G + ++ + P V T L + + G + + + +AW+ C
Sbjct: 437 GKEIHCYALKNLFL-PNVSLVTSLMVMYSKCGVPEYPIRLFDRLE-QRNVKAWTAMIDCY 494
Query: 235 LSACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYT--------SLGKWKEAHIMRN 286
+ C + +E+ L LS P S V M + T LGK HI++
Sbjct: 495 VENCDLRAGIEVFRLML--LSKHRPDS----VTMGRVLTVCSDLKALKLGKELHGHILKK 548
Query: 287 LIDGKELV 294
+ V
Sbjct: 549 EFESIPFV 556
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHP--AEALDLFRRMVRTDIRPDG 58
MY C ++ A+++FD + N+ SW +++ G SG + L F M + +
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
+L+ V + A +L +G + GL ++TSL+ MY KCG + AR VFD
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE 274
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSIL 167
+ ++D+ +W +MI A + EA+ LF M EE+I P++++ T+IL
Sbjct: 275 IVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL 323
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 30 IAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGL 89
I +A+ + AL + + + I + T + +L AC SL G+++ +I + GL
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 90 DLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMG--NEAINLF 147
+ ++ ++T L+HMY+ CGS++ A++VFD T ++ W +++ I G + ++ F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 148 HKMTVEERIMPDAIVY--TSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADL 205
+M + D VY +++ + + + + GLK ++ G+ +V T L D+
Sbjct: 203 TEM---RELGVDLNVYSLSNVFKSFAGASALRQGLK-THALAIKNGLFNSVFLKTSLVDM 258
Query: 206 LGRVGQLDLA 215
+ G++ LA
Sbjct: 259 YFKCGKVGLA 268
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY KC +L SA FD A K L+WT++I Y + +A++ F +MV P+ T
Sbjct: 563 MYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFT 622
Query: 61 LATVLSACADLGSLSKGQEIEEY-IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREV 115
VLS C+ G + + + +Y L ++ + ++ + ++CG +++A+ +
Sbjct: 623 FTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 1/203 (0%)
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
D + L + C + L + + + I LD LL MYS CG +A VF
Sbjct: 253 DLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVF 312
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
+++++K+L W +I C+A +G G +AI++F + EE +PD ++ I AC G V
Sbjct: 313 EKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK-EEGNIPDGQLFRGIFYACGMLGDV 371
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
++GL F+SM D+GIAP+++ Y L ++ G LD A++ ++ MP++ W L++
Sbjct: 372 DEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMN 431
Query: 237 ACRIHGNVELGELAAAKLSDLSP 259
R+HGN+ELG+ A + L P
Sbjct: 432 LSRVHGNLELGDYCAEVVEFLDP 454
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+ C A +F+ + KN+ +W +I +A++G +A+D+F R PDG
Sbjct: 298 MYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQL 357
Query: 61 LATVLSACADLGSLSKG-QEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ AC LG + +G E YG+ + SL+ MY+ G + +A E +R+
Sbjct: 358 FRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERM 417
Query: 120 T-DKDLTIWTSMINCYAIHG 138
+ ++ +W +++N +HG
Sbjct: 418 PMEPNVDVWETLMNLSRVHG 437
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 128/241 (53%), Gaps = 9/241 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
YA+C LTSA R FD+ K+++SWT++I+ ++ GH +A+ +F M+ P+ T
Sbjct: 227 FYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFT 286
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ ++L AC++ +L G+++ + + D V TSL+ MY+KCG I R+VFD ++
Sbjct: 287 VCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS 346
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+++ WTS+I +A G G EAI+LF M ++ + + SIL AC G + G
Sbjct: 347 NRNTVTWTSIIAAHAREGFGEEAISLFRIMK-RRHLIANNLTVVSILRACGSVGALLLG- 404
Query: 181 KFFKSMHEDF---GIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
K +H I V + L L + G+ A + +Q +P +W+ ++S
Sbjct: 405 ---KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISG 460
Query: 238 C 238
C
Sbjct: 461 C 461
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC ++ R++FD + +N ++WTS+IA +A+ G EA+ LFR M R + + T
Sbjct: 328 MYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT 387
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
+ ++L AC +G+L G+E+ I ++ + + ++L+ +Y KCG + A V ++
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
+D+ WT+MI+ + G +EA++ +M ++E + P+ Y+S L AC++S
Sbjct: 448 SRDVVSWTAMISGCSSLGHESEALDFLKEM-IQEGVEPNPFTYSSALKACANS 499
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 1/170 (0%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
+Y KC A + ++++SWT+MI+G + GH +EALD + M++ + P+ T
Sbjct: 429 LYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT 120
++ L ACA+ SL G+ I + V ++L+HMY+KCG + +A VFD +
Sbjct: 489 YSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Query: 121 DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
+K+L W +MI YA +G EA+ L ++M E + D I + +IL C
Sbjct: 549 EKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI-FATILSTC 597
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 140/301 (46%), Gaps = 19/301 (6%)
Query: 7 NLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIR-PDGATLATVL 65
+L AR++FD KN ++WT+MI GY + G EA LF V+ IR + +L
Sbjct: 132 DLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLL 191
Query: 66 SACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT 125
+ C+ G+++ + G+ + V++SL++ Y++CG + A FD + +KD+
Sbjct: 192 NLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVI 250
Query: 126 IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKS 185
WT++I+ + G G +AI +F M + +P+ SIL ACS E L+F +
Sbjct: 251 SWTAVISACSRKGHGIKAIGMFIGM-LNHWFLPNEFTVCSILKACSE----EKALRFGRQ 305
Query: 186 MHE---DFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHG 242
+H I V T L D+ + G++ GM + W+ +++A H
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWTSIIAA---HA 361
Query: 243 NVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECGRSQV 302
GE A + + L+AN T + + + L+ GKEL + ++ +
Sbjct: 362 REGFGEEAISLFRIMKRRH-----LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 303 E 303
E
Sbjct: 417 E 417
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MYAKC ++ A R+FD KN++SW +MI GYA++G EAL L RM D
Sbjct: 530 MYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI 589
Query: 61 LATVLSACADL 71
AT+LS C D+
Sbjct: 590 FATILSTCGDI 600
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 55 RPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLD-LDQQVQTSLLHMYSKC---GSIQ 110
R D A LA L + S G + + I+ L D QV ++ S C G +
Sbjct: 82 RVDYALLAEWLQS-------SNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLV 134
Query: 111 KAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLAC 170
AR+VFD + +K+ WT+MI+ Y +G+ +EA LF + ++ +L C
Sbjct: 135 YARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLC 194
Query: 171 SHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQA 230
S E G + +M + G+ + + L + G+L A+ A M + +
Sbjct: 195 SRRAEFELGRQVHGNMVK-VGVGNLIVE-SSLVYFYAQCGELTSALRAFDMME-EKDVIS 251
Query: 231 WSCLLSACRIHGN 243
W+ ++SAC G+
Sbjct: 252 WTAVISACSRKGH 264
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 130/251 (51%), Gaps = 15/251 (5%)
Query: 56 PDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREV 115
PD + +CA+L SL +++ ++ D ++ ++ M+ +C SI A+ V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 116 FDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGL 175
FD + DKD+ W M+ Y+ +GMG++A++LF +MT + + P+ + ++ LAC+ G
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMT-KHGLKPNEETFLTVFLACATVGG 352
Query: 176 VEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLL 235
+E+ F SM + GI+P +HY + +LG+ G L A I+ +P + A W +
Sbjct: 353 IEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMR 412
Query: 236 SACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGK-WKEAHIM---------R 285
+ R+HG+++L + + D+ P S ++ + T K +KE +++ R
Sbjct: 413 NYARLHGDIDLEDYMEELMVDVDP----SKAVINKIPTPPPKSFKETNMVTSKSRILEFR 468
Query: 286 NLIDGKELVKE 296
NL K+ KE
Sbjct: 469 NLTFYKDEAKE 479
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
M+ +C ++T A+R+FD K++ SW M+ Y+ +G +AL LF M + ++P+ T
Sbjct: 280 MFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEET 339
Query: 61 LATVLSACADLGSLSKGQEIEEYIYL------YGLDLDQQVQTSLLHMYSKCGSIQKARE 114
TV ACA +G + E +++ +G+ + +L + KCG + +A +
Sbjct: 340 FLTVFLACATVGGIE-----EAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQ 394
Query: 115 -VFDRVTDKDLTIWTSMINCYAIHG 138
+ D + W +M N +HG
Sbjct: 395 YIRDLPFEPTADFWEAMRNYARLHG 419
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 112/214 (52%), Gaps = 3/214 (1%)
Query: 35 QSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQ 94
+ G +A+++ + D L + C D +L + + + E+I D
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 95 VQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE 154
S++ MYS CGS++ A VF+ + +++L W +I C+A +G G +AI+ F + +E
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK-QE 276
Query: 155 RIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDL 214
PD ++ I AC G + +GL F+SM++++GI P ++HY L +L G LD
Sbjct: 277 GNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDE 336
Query: 215 AVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGE 248
A+ ++ M +V W L++ R+HG++ LG+
Sbjct: 337 ALRFVESMEPNV--DLWETLMNLSRVHGDLILGD 368
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+ C ++ A +F+ +N+ +W +I +A++G +A+D F R + +PDG
Sbjct: 225 MYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEM 284
Query: 61 LATVLSACADLGSLSKGQEIEEYIYL-YGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
+ AC LG +++G E +Y YG+ + SL+ M ++ G + +A F
Sbjct: 285 FKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR-FVES 343
Query: 120 TDKDLTIWTSMINCYAIHG 138
+ ++ +W +++N +HG
Sbjct: 344 MEPNVDLWETLMNLSRVHG 362
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 102/190 (53%), Gaps = 1/190 (0%)
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIW 127
C +L + + E I D + +++ MYS C S+ A +VF+ + + +
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTL 188
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
M+ C+ +G G EAI+LF + EE P+ ++ + C+ +G V++G F++M+
Sbjct: 189 CVMMRCFVNNGYGEEAIDLFTRFK-EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMY 247
Query: 188 EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELG 247
++GI P+++HY + +L G LD A++ ++ MP++ W L++ R+HG+VELG
Sbjct: 248 REYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELG 307
Query: 248 ELAAAKLSDL 257
+ A + L
Sbjct: 308 DRCAELVEKL 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+ C ++ A ++F+ N + M+ + +G+ EA+DLF R +P+G
Sbjct: 163 MYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEI 222
Query: 61 LATVLSACADLGSLSKGQEIEEYIYL-YGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
V S C G + +G + +Y YG+ + S+ M + G + +A +R+
Sbjct: 223 FNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERM 282
Query: 120 T-DKDLTIWTSMINCYAIHG---MGNEAINLFHKM 150
+ + +W +++N +HG +G+ L K+
Sbjct: 283 PMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKL 317
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 5/201 (2%)
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
D L + C ++ +L + + + + I LD + +++ MYS C S A VF
Sbjct: 111 DFPRLLGLAKLCGEVEALEEARVVHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVF 166
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
+ + ++ W +MI C A +G G AI++F + +EE PD ++ ++ AC G +
Sbjct: 167 NEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRF-IEEGNKPDKEIFKAVFFACVSIGDI 225
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
+GL F+SM+ D+G+ +++ Y + ++L G LD A+D ++ M ++ + W L++
Sbjct: 226 NEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMN 285
Query: 237 ACRIHGNVELGELAAAKLSDL 257
C + G +ELG+ A + L
Sbjct: 286 LCWVQGYLELGDRFAELIKKL 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGAT 60
MY+ C + A +F+ +N +W +MI A++G A+D+F R + +PD
Sbjct: 152 MYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEI 211
Query: 61 LATVLSACADLGSLSKGQEIEEYIYL-YGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV 119
V AC +G +++G E +Y YG+ L + +++ M + CG + +A + +R+
Sbjct: 212 FKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERM 271
Query: 120 T-DKDLTIWTSMINCYAIHG---MGNEAINLFHKM 150
T + + +W +++N + G +G+ L K+
Sbjct: 272 TVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKL 306
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 117/225 (52%), Gaps = 18/225 (8%)
Query: 10 SARRIFD-LTAGK---NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVL 65
SA R+F+ + +G+ +I+++ +MI GY ++G +A++ R M D T T++
Sbjct: 240 SAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMI 299
Query: 66 SAC---ADLGS-LSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
AC +D GS ++ QE++E G+ + + ++ K G + + VF+ +
Sbjct: 300 QACYADSDFGSCVALYQEMDE----KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIR 355
Query: 122 K----DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
K ++ I+T +I+ YA G +AI L H+M ++E PD + Y+ ++ +G VE
Sbjct: 356 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM-IDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
+ L +F + D G+A Y+ L D LG+ G++D A + M
Sbjct: 415 EALDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N+ +T +I GYA+SG +A+ L RM+ +PD T + V++ G + + +
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT----IWTSMINCYAIH 137
GL ++ +SL+ K G + +A +F+ +++K T + ++I+ + H
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
+EAI LF +M EE YT +L E+ LK + M D GI PT
Sbjct: 481 RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLW-DMMIDKGITPTAA 539
Query: 198 HYTCLAD---LLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACR 239
+ L+ L G+V + +D + M + + A + + C+
Sbjct: 540 CFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCK 584
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 6/217 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N++S++++I G+A++G EAL+LF M I D + T+LS +G + +I
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ G+ D +LL Y K G + ++VF + + +L ++++I+ Y+
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
G+ EA+ +F + + D ++Y++++ A +GLV + M ++ GI+P V
Sbjct: 528 GLYKEAMEIFREFK-SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVV 585
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCL 234
Y + D GR +D + D G L + A S L
Sbjct: 586 TYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 113/224 (50%), Gaps = 11/224 (4%)
Query: 8 LTSARRIFDLT----AGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLAT 63
+T A+RIF+ G + +++++I+ Y +SG EA+ +F M +RP+ T
Sbjct: 249 VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNA 308
Query: 64 VLSACADLG-SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK 122
V+ AC G + + + + G+ D+ SLL + S+ G + AR +FD +T++
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR 368
Query: 123 ----DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
D+ + ++++ G + A + +M V +RIMP+ + Y++++ + +G ++
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPV-KRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
L F M GIA Y L + +VG+ + A+D ++ M
Sbjct: 428 ALNLFGEMRY-LGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 7/190 (3%)
Query: 41 EALDLFRRMVRTDIRPD--GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTS 98
+A+ + V+ + R + G + ++S G ++ + I E + G ++
Sbjct: 214 KAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSA 273
Query: 99 LLHMYSKCGSIQKAREVFDRVTD----KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEE 154
L+ Y + G ++A VF+ + + +L + ++I+ GM + + F
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 155 RIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDL 214
+ PD I + S+L CS GL E F M + I V Y L D + + GQ+DL
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 215 AVDAIQGMPL 224
A + + MP+
Sbjct: 393 AFEILAQMPV 402
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 11/246 (4%)
Query: 2 YAKCDNLTSARRIFD----LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
Y K N A R+ + + N++S+T+++ Y + G A +FRRM + P
Sbjct: 149 YGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPS 208
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIY---LYGLDLDQQVQTSLLHMYSKCGSIQKARE 114
T +L + + +E+ E + L DQ++ +++MY K G+ +KAR+
Sbjct: 209 AITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARK 268
Query: 115 VFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
VF + K + T N + ++ + I PD + Y ++ A +
Sbjct: 269 VFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRAR 328
Query: 175 LVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLD-VQAQAWS- 232
E+ L F+ M D G+ PT K Y L D G ++ A + M D + WS
Sbjct: 329 REEEALSVFEEML-DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY 387
Query: 233 -CLLSA 237
+LSA
Sbjct: 388 TTMLSA 393
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 40/228 (17%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNI----LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP 56
MY K N AR++F GK + +++ S+++ ++ + E ++ +M R+DI+P
Sbjct: 256 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS--FETSY-KEVSKIYDQMQRSDIQP 312
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
D + A ++ A + + EE + ++ LD V
Sbjct: 313 DVVSYALLIKAYG------RARREEEALSVFEEMLDAGV--------------------- 345
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
R T K I +++ +AI GM +A +F M +RI PD YT++L A ++ +
Sbjct: 346 -RPTHKAYNI---LLDAFAISGMVEQAKTVFKSMR-RDRIFPDLWSYTTMLSAYVNASDM 400
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPL 224
E KFFK + D G P + Y L + ++ ++ + M L
Sbjct: 401 EGAEKFFKRIKVD-GFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL 447
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 11/246 (4%)
Query: 2 YAKCDNLTSARRIFD----LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
Y K N A R+ + + N++S+T+++ Y + G A +FRRM + P
Sbjct: 156 YGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPS 215
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIY---LYGLDLDQQVQTSLLHMYSKCGSIQKARE 114
T +L + + +E+ E + L DQ++ +++MY K G+ +KAR+
Sbjct: 216 AITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARK 275
Query: 115 VFDRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSG 174
VF + K + T N + ++ + I PD + Y ++ A +
Sbjct: 276 VFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRAR 335
Query: 175 LVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLD-VQAQAWS- 232
E+ L F+ M D G+ PT K Y L D G ++ A + M D + WS
Sbjct: 336 REEEALSVFEEML-DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY 394
Query: 233 -CLLSA 237
+LSA
Sbjct: 395 TTMLSA 400
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 40/228 (17%)
Query: 1 MYAKCDNLTSARRIFDLTAGKNI----LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP 56
MY K N AR++F GK + +++ S+++ ++ + E ++ +M R+DI+P
Sbjct: 263 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS--FETSY-KEVSKIYDQMQRSDIQP 319
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
D + A ++ A + + EE + ++ LD V
Sbjct: 320 DVVSYALLIKAYG------RARREEEALSVFEEMLDAGV--------------------- 352
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
R T K I +++ +AI GM +A +F M +RI PD YT++L A ++ +
Sbjct: 353 -RPTHKAYNI---LLDAFAISGMVEQAKTVFKSMR-RDRIFPDLWSYTTMLSAYVNASDM 407
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPL 224
E KFFK + D G P + Y L + ++ ++ + M L
Sbjct: 408 EGAEKFFKRIKVD-GFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL 454
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 5/224 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N + + ++I ++ EAL L M PD T V+ +++ ++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGN 141
+ + G D L++ K G + A+++F R+ ++ I+ ++I+ + HG +
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 142 EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTC 201
+A + M I+PD Y S++ GLV L+ M G P V YT
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTI 429
Query: 202 LADLLGRVGQLDLAVDAIQGMPLD---VQAQAWSCLLSA-CRIH 241
L D ++G++D A + + M D ++CL+SA C+ H
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 8/194 (4%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
++ ++ S+I+G + AL L R M+ + + T T+++A G + + +++
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV-----TDKDLTIWTSMINCYAI 136
+ G LD+ SL+ + G + KAR +F+++ +++ +IN
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC-NILINGLCR 611
Query: 137 HGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTV 196
GM EA+ F K V PD + + S++ +G +EDGL F+ + + GI P
Sbjct: 612 SGMVEEAVE-FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE-GIPPDT 669
Query: 197 KHYTCLADLLGRVG 210
+ L L + G
Sbjct: 670 VTFNTLMSWLCKGG 683
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 101/207 (48%), Gaps = 6/207 (2%)
Query: 23 ILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEE 82
+L + ++I G + H +AL+LF+ M IRP+ T ++++S + G S +
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 83 YIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD----RVTDKDLTIWTSMINCYAIHG 138
+ ++ D ++L+ + K G + +A +++D R D + ++S+IN + +H
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 139 MGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKH 198
+EA +F M V + PD + Y +++ VE+G++ F+ M + + TV
Sbjct: 376 RLDEAKQMFEFM-VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT- 433
Query: 199 YTCLADLLGRVGQLDLAVDAIQGMPLD 225
Y L L + G D+A + + M D
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSD 460
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 99/225 (44%), Gaps = 10/225 (4%)
Query: 6 DNLTSARRIFDLTAGK----NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
D L A+++F+ K +++++ ++I G+ + E +++FR M + + + T
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
++ G QEI + + G+ + +LL K G ++KA VF+ +
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 122 KDL--TIWTS--MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+ TI+T MI G + +LF ++++ + PD + Y +++ G E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKE 553
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
+ FK M ED G P Y L R G + + + I+ M
Sbjct: 554 EADALFKEMKED-GTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 16 DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLS 75
+L N +++ +I + + AL + +M++ P+ TL+++L+ +S
Sbjct: 109 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168
Query: 76 KGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMI 131
+ + + +++ G + +L+H +A + DR+ K DL + ++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 132 NCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFG 191
N G + A NL +KM + ++ P ++Y +I+ ++D L FK M E G
Sbjct: 229 NGLCKRGDTDLAFNLLNKME-QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKG 286
Query: 192 IAPTVKHYTCLADLLGRVGQ 211
I P V Y+ L L G+
Sbjct: 287 IRPNVVTYSSLISCLCNYGR 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 9/231 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
NI++ +S++ GY S +EA+ L +M T +P+ T T++ S+ +
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT----IWTSMINCYAIH 137
+ + G D +++ K G A + +++ L I+ ++I+ +
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
++A+NLF +M + I P+ + Y+S++ + G D + M E I P V
Sbjct: 270 KHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVF 327
Query: 198 HYTCLADLLGRVGQLDLA---VDAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
++ L D + G+L A D + +D +S L++ +H ++
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 10/268 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
++ +++ ++ + + + DL M PD + +L A A GS+ + +
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV----TDKDLTIWTSMINCYAIH 137
+ G + + LL+++ + G R++F + TD D + +I +
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 400
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
G E + LFH M VEE I PD Y I+ AC GL ED K + M + I P+ K
Sbjct: 401 GYFKEVVTLFHDM-VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSK 458
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGM---PLDVQAQAWSCLLSACRIHGNVELGELAAAKL 254
YT + + G+ + A+ A M + + + LL + G V+ E ++L
Sbjct: 459 AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRL 518
Query: 255 SDLS-PGSSGSYVLMANLYTSLGKWKEA 281
D P + ++ Y GK++EA
Sbjct: 519 VDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 21 KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEI 80
+++ S+T++I Y ++G +L+L RM I P T TV++ACA G +
Sbjct: 174 RSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA-----RGGLDW 228
Query: 81 EEYIYLY------GLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD----KDLTIWTSM 130
E + L+ G+ D +LL + G +A VF + D DLT ++ +
Sbjct: 229 EGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHL 288
Query: 131 INCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDF 190
+ + + +L +M +PD Y +L A + SG +++ + F M
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGS-LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA- 346
Query: 191 GIAPTVKHYTCLADLLGRVGQLD 213
G P Y+ L +L G+ G+ D
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYD 369
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 134/284 (47%), Gaps = 18/284 (6%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+++S+++++ GY + G + L M R ++P+ +++ + L++ +E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT----IWTSMINCYAIH 137
+ G+ D V T+L+ + K G I+ A + F + +D+T +T++I+ +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
G EA LFH+M + + PD++ +T ++ +G ++D + M + G +P V
Sbjct: 400 GDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVV 457
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGM---PLDVQAQAWSCLLSACRIHGNVE-----LGEL 249
YT L D L + G LD A + + M L ++ +++ GN+E +GE
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 250 AAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKEL 293
AA L+ + +Y + + Y G+ +A + + GK L
Sbjct: 518 EAAGLN----ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 9/230 (3%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
+T++I G+ + G A F M DI PD T ++S +G + + ++ ++
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD----KDLTIWTSMINCYAIHGMGN 141
GL+ D T L++ Y K G ++ A V + + ++ +T++I+ G +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 142 EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTC 201
A L H+M + + P+ Y SI+ SG +E+ +K E G+ YT
Sbjct: 474 SANELLHEMW-KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTT 531
Query: 202 LADLLGRVGQLDLAVDAIQ---GMPLDVQAQAWSCLLSACRIHGNVELGE 248
L D + G++D A + ++ G L ++ L++ +HG +E GE
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 2 YAKCDNLTSARRIFD--LTAG--KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
Y K ++ A R+ + + AG N++++T++I G + G A +L M + ++P+
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T ++++ G++ + ++ GL+ D T+L+ Y K G + KA+E+
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 118 RVTDKDL----TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
+ K L + ++N + +HGM + L + M + + I P+A + S++
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM-LAKGIAPNATTFNSLV----KQ 605
Query: 174 GLVEDGLKFFKSMHEDF---GIAPTVKHYTCLA 203
+ + LK ++++D G+ P K Y L
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 24 LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEY 83
+++T +I GY ++GH +A + M++ P+ T T++ G L E+
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 84 IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMINCYAIHGM 139
++ GL + S+++ K G+I++A ++ + D +T++++ Y G
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 140 GNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHY 199
++A + +M + + + P + + ++ G++EDG K M GIAP +
Sbjct: 542 MDKAQEILKEM-LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTF 599
Query: 200 TCLA 203
L
Sbjct: 600 NSLV 603
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 134/284 (47%), Gaps = 18/284 (6%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+++S+++++ GY + G + L M R ++P+ +++ + L++ +E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT----IWTSMINCYAIH 137
+ G+ D V T+L+ + K G I+ A + F + +D+T +T++I+ +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
G EA LFH+M + + PD++ +T ++ +G ++D + M + G +P V
Sbjct: 400 GDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVV 457
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGM---PLDVQAQAWSCLLSACRIHGNVE-----LGEL 249
YT L D L + G LD A + + M L ++ +++ GN+E +GE
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 250 AAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKEL 293
AA L+ + +Y + + Y G+ +A + + GK L
Sbjct: 518 EAAGLN----ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 9/230 (3%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
+T++I G+ + G A F M DI PD T ++S +G + + ++ ++
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD----KDLTIWTSMINCYAIHGMGN 141
GL+ D T L++ Y K G ++ A V + + ++ +T++I+ G +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 142 EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTC 201
A L H+M + + P+ Y SI+ SG +E+ +K E G+ YT
Sbjct: 474 SANELLHEMW-KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTT 531
Query: 202 LADLLGRVGQLDLAVDAIQ---GMPLDVQAQAWSCLLSACRIHGNVELGE 248
L D + G++D A + ++ G L ++ L++ +HG +E GE
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 2 YAKCDNLTSARRIFD--LTAG--KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
Y K ++ A R+ + + AG N++++T++I G + G A +L M + ++P+
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T ++++ G++ + ++ GL+ D T+L+ Y K G + KA+E+
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 118 RVTDKDL----TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
+ K L + ++N + +HGM + L + M + + I P+A + S++
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM-LAKGIAPNATTFNSLV----KQ 605
Query: 174 GLVEDGLKFFKSMHEDF---GIAPTVKHYTCLA 203
+ + LK ++++D G+ P K Y L
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 24 LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEY 83
+++T +I GY ++GH +A + M++ P+ T T++ G L E+
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 84 IYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMINCYAIHGM 139
++ GL + S+++ K G+I++A ++ + D +T++++ Y G
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 140 GNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHY 199
++A + +M + + + P + + ++ G++EDG K M GIAP +
Sbjct: 542 MDKAQEILKEM-LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTF 599
Query: 200 TCLA 203
L
Sbjct: 600 NSLV 603
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 122/257 (47%), Gaps = 17/257 (6%)
Query: 2 YAKCDNLTSARRIFDLTAG----KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
Y + + A +FD G N++++T++I ++ H A++LF +M RP+
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T +++ ++G + + ++ + T+L+ + K G + +A+E+++
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 118 RVTD----KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
+ D+ + S+IN ++G+ +EA +F+ M P+ ++YT+++ S
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME-RNGCYPNEVIYTTLIHGFCKS 341
Query: 174 GLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM-----PLDVQA 228
VEDG+K F M + +A T+ YT L VG+ D+A + M P D+
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTIT-YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI-- 398
Query: 229 QAWSCLLSACRIHGNVE 245
+ ++ LL +G VE
Sbjct: 399 RTYNVLLDGLCCNGKVE 415
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N++++T++I + + G EA +L+ M++ + PD T ++++ G L + +++
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ G ++ + T+L+H + K ++ ++F ++ K + +T +I Y +
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHE---DFGIAP 194
G + A +F++M+ R PD Y +L +G VE L F+ M + D I
Sbjct: 377 GRPDVAQEVFNQMS-SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 195 TVKHYTCLADLLGRVGQLDLAVD 217
YT + + ++G+++ A D
Sbjct: 436 ----YTIIIQGMCKLGKVEDAFD 454
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N +++T +I GY G P A ++F +M PD T +L G + K I
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
EY+ +D++ T ++ K G ++ A ++F + K ++ +T+MI+ +
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVY 163
G+ +EA +LF KM E+ +P+ VY
Sbjct: 482 GLIHEADSLFKKMK-EDGFLPNESVY 506
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
++++++S+I G G + + R M+ +I PD T + ++ G L + +E+
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ G+ D SL+ + K + +A ++FD + K D+ ++ +IN Y
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
++ + LF +++ + ++P+ I Y +++L SG + + F+ M G+ P+V
Sbjct: 399 KRVDDGMRLFREIS-SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVV 456
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGM 222
Y L D L G+L+ A++ + M
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKM 481
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 105/204 (51%), Gaps = 6/204 (2%)
Query: 13 RIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLG 72
R + L + +++++++ G+ G +EA+ L RMV RPD T++T+++ G
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 73 SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI----WT 128
+S+ + + + YG D+ +L+ K G+ A ++F ++ ++++ ++
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249
Query: 129 SMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHE 188
+I+ G ++A++LF++M ++ I D + Y+S++ + G +DG K + M
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKG-IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 189 DFGIAPTVKHYTCLADLLGRVGQL 212
I P V ++ L D+ + G+L
Sbjct: 309 R-NIIPDVVTFSALIDVFVKEGKL 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
Query: 2 YAKCDNLTSARRIFDLTAGK----NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
Y K + R+F + K N +++ +++ G+ QSG A +LF+ MV + P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T +L D G L+K EI E + + L + ++H + A +F
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 118 RVTDK----DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLA-CSH 172
++DK D+ + MI G +EA LF KM E+ PD Y ++ A
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK-EDGCTPDDFTYNILIRAHLGG 573
Query: 173 SGLV 176
SGL+
Sbjct: 574 SGLI 577
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
Query: 12 RRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADL 71
R++ + +++ ++ +I + G +AL LF M I+ D T ++++ +
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 72 GSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIW 127
G G ++ + + D ++L+ ++ K G + +A+E+++ + + D +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
S+I+ + +EA +F M V + PD + Y+ ++ + + V+DG++ F+ +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLM-VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 188 EDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
G+ P Y L + G+L+ A + Q M
Sbjct: 413 SK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 45/264 (17%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP------------------------- 56
++ ++T+++ Y+++G +A+DLF RM P
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 57 -----------DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSK 105
D T +TVLSACA G L + +E + G + +LL ++ K
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 106 CGSIQKAREVFDRVTDK----DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAI 161
G +A V + + D + ++ Y G EA + MT ++ +MP+AI
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT-KKGVMPNAI 387
Query: 162 VYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQG 221
YT+++ A +G ++ LK F SM E G P Y + LLG+ + + + +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 222 MPLD---VQAQAWSCLLSACRIHG 242
M + W+ +L+ C G
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKG 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 12/225 (5%)
Query: 8 LTSARRIFDLTAGKNILS-WTSMIAGYAQSGHPAEALDLFRRMVRTD----IRPDGATLA 62
LT R FD + + + S++ G SGH A+ LF +V + ++ D +
Sbjct: 120 LTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIE 179
Query: 63 TVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD- 121
+ S ++ + I L LD + T++LH YS+ G +KA ++F+R+ +
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 122 ---KDLTIWTSMINCYAIHGMG-NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
L + +++ + G + + + +M + + D +++L AC+ GL+
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR-SKGLKFDEFTCSTVLSACAREGLLR 298
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
+ +FF + + G P Y L + G+ G A+ ++ M
Sbjct: 299 EAKEFFAEL-KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 342
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 83/195 (42%), Gaps = 14/195 (7%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
++ ++I+ Y + G +A ++ M R T +L+A A G G+ + +
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL--------TIWTSMINCYAI 136
G + + +L Y+K G+ + +R+ + + T+ + C A+
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 137 HGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTV 196
G A LF K + PD +++ S+L + + + + +S+ ED G++P +
Sbjct: 613 AG-SERAFTLFKKHGYK----PDMVIFNSMLSIFTRNNMYDQAEGILESIRED-GLSPDL 666
Query: 197 KHYTCLADLLGRVGQ 211
Y L D+ R G+
Sbjct: 667 VTYNSLMDMYVRRGE 681
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 142/298 (47%), Gaps = 20/298 (6%)
Query: 2 YAKCDNLTSARRIFDLTAGKN----ILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
+ K N++ A+++FD ++ ++S+ ++I GY + G+ E L +M ++ RPD
Sbjct: 250 FCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPD 309
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T + +++A + + + + GL + + T+L+H +S+ G I +E +
Sbjct: 310 VFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQ 369
Query: 118 RVTDK----DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
++ K D+ ++ +++N + +G A N+ M + + PD I YT+++
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM-IRRGLRPDKITYTTLIDGFCRG 428
Query: 174 GLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM------PLDVQ 227
G VE L+ K M ++ GI ++ L + + G++ A A++ M P DV
Sbjct: 429 GDVETALEIRKEMDQN-GIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV- 486
Query: 228 AQAWSCLLSACRIHGNVELG-ELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEAHIM 284
++ ++ A G+ + G +L SD S +Y ++ N LG+ K A ++
Sbjct: 487 --TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADML 542
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 88 GLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL----TIWTSMINCYAIHGMGNEA 143
G L+ V L++ + K G+I A++VFD +T + L + ++IN Y G +E
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 144 INLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLA 203
L H+M + R PD Y++++ A ++ F M + G+ P +T L
Sbjct: 295 FRLKHQME-KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR-GLIPNDVIFTTLI 352
Query: 204 DLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAK 253
R G++DL ++ Q M L Q +L ++G + G+L AA+
Sbjct: 353 HGHSRNGEIDLMKESYQKM-LSKGLQP-DIVLYNTLVNGFCKNGDLVAAR 400
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
+T++I G+A+ G AL L M + + D + + +G + + I
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI-----WTSMINCYAIHGMG 140
GL D+ TS++ + K + +A E+F+ + +K+ + + +MI Y G
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL-EKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
+EA +L + + I P I Y IL G V++ LK F+ M +D AP + Y
Sbjct: 325 DEAYSLLERQRAKGSI-PSVIAYNCILTCLRKMGKVDEALKVFEEMKKD--AAPNLSTYN 381
Query: 201 CLADLLGRVGQLDLAVDAIQGM 222
L D+L R G+LD A + M
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSM 403
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 83/205 (40%), Gaps = 6/205 (2%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
++T++I ++ H L LF++M P T++ A G + + + +
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMINCYAIHGMG 140
LD D + + + K G + A + F + D +TSMI
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRL 289
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
+EA+ +F + R+ P Y ++++ +G ++ + G P+V Y
Sbjct: 290 DEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK-GSIPSVIAYN 347
Query: 201 CLADLLGRVGQLDLAVDAIQGMPLD 225
C+ L ++G++D A+ + M D
Sbjct: 348 CILTCLRKMGKVDEALKVFEEMKKD 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 95/232 (40%), Gaps = 9/232 (3%)
Query: 13 RIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLG 72
++ D N + +TS+I + G + +++ M+ + PD L T + G
Sbjct: 472 KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG 531
Query: 73 SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWT 128
KG+ + E I D + + L+H K G + E+F + ++ D +
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 129 SMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHE 188
+I+ + G N+A L +M + P + Y S++ + +++ F+
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 189 DFGIAPTVKHYTCLADLLGRVGQLD---LAVDAIQGMPLDVQAQAWSCLLSA 237
I V Y+ L D G+VG++D L ++ + L W+ LL A
Sbjct: 651 K-RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 95/183 (51%), Gaps = 5/183 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+++ + ++I G + H +AL+LF M IRPD T ++++S + G S +
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD----RVTDKDLTIWTSMINCYAIH 137
+ ++ + ++L+ + K G + +A +++D R D D+ ++S+IN + +H
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
+EA ++F M + + P+ + Y++++ + VE+G++ F+ M + + TV
Sbjct: 377 DRLDEAKHMFELM-ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 198 HYT 200
+ T
Sbjct: 436 YTT 438
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 103/231 (44%), Gaps = 9/231 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+I++ +S++ GY S ++A+ L +MV +PD T T++ S+ +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV----TDKDLTIWTSMINCYAIH 137
+ + G D ++++ K G I A + ++ + D+ I+ ++I+ +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
++A+NLF +M + I PD Y+S++ + G D + M E I P V
Sbjct: 272 KHMDDALNLFTEMD-NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVV 329
Query: 198 HYTCLADLLGRVGQLDLA---VDAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
++ L D + G+L A D + +D +S L++ +H ++
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 100/232 (43%), Gaps = 10/232 (4%)
Query: 2 YAKCDNLTSARRIFD----LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
+ K L A +++D + +I +++S+I G+ EA +F M+ D P+
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T +T++ + +G E+ + GL + T+L+H + + A+ VF
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 118 RVTD----KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
++ ++ + +++ +G +A+ +F + + PD Y ++ +
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ-RSTMEPDIYTYNIMIEGMCKA 516
Query: 174 GLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLD 225
G VEDG + F ++ G++P V Y + R G + A ++ M D
Sbjct: 517 GKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N +++T++I G+ Q+ A +F++MV + P+ T +L G L+K +
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
EY+ ++ D ++ K G ++ E+F ++ K ++ + +MI+ +
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
G EA +L KM E+ +P++ Y +++ A G E + K M
Sbjct: 552 GSKEEADSLLKKMK-EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 6/193 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+I+++ S+I+ YA+ G EA++L +M +PD T T+LS G + I
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMINCYAIH 137
E + G + + + MY G + ++FD + D+ W +++ + +
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
GM +E +F +M +P+ + +++ A S G E + ++ M D G+ P +
Sbjct: 468 GMDSEVSGVFKEMK-RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLS 525
Query: 198 HYTCLADLLGRVG 210
Y + L R G
Sbjct: 526 TYNTVLAALARGG 538
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 94/216 (43%), Gaps = 10/216 (4%)
Query: 1 MYAKCDNLTSARRIFDLTA----GKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP 56
MY T +IFD +I++W +++A + Q+G +E +F+ M R P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
+ T T++SA + GS + + + G+ D ++L ++ G +++ +V
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGN-EAINLFHKMTVEER---IMPDAIVYTSILLACSH 172
+ D + C +H N + I L H + E I P A++ +++L CS
Sbjct: 548 AEMEDGRCKP-NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 173 SGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGR 208
L+ + + F + E G +P + + + GR
Sbjct: 607 CDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGR 641
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSL-SKGQEI 80
++ S+TS+I+ +A SG EA+++F++M +P T +L+ +G+ +K +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 81 EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMINCYAI 136
E + G+ D +L+ + Q+A +VF+ + D + ++++ Y
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 137 HGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTV 196
EA+ + ++M + P + Y S++ A + G++++ ++ M E G P V
Sbjct: 327 SHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK-GTKPDV 384
Query: 197 KHYTCLADLLGRVGQLDLAVDAIQGM 222
YT L R G+++ A+ + M
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEM 410
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 13/233 (5%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+++ + ++I + H +AL+LF+ M IRP+ T ++++S G S ++
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD----RVTDKDLTIWTSMINCYAIH 137
+ ++ + +L+ + K G +A +++D R D D+ + S++N + +H
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
++A +F M V + PD + Y +++ S VEDG + F+ M + TV
Sbjct: 379 DRLDKAKQMFEFM-VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 198 HYTCLADLLGRVGQLDLAVDAIQ-----GMPLDVQAQAWSCLLSACRIHGNVE 245
YT L L G D A + G+P D+ +S LL +G +E
Sbjct: 438 -YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI--MTYSILLDGLCNNGKLE 487
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N+++++S+I+ G ++A L M+ I P+ T ++ A G + +++
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ + +D D SL++ + + KA+++F+ + K D+ + ++I +
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
+ LF +M+ ++ D + YT+++ H G ++ K FK M D G+ P +
Sbjct: 414 KRVEDGTELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIM 471
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGM 222
Y+ L D L G+L+ A++ M
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYM 496
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 23/259 (8%)
Query: 6 DNLTSARRIFDLTAGKN----ILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
D L A+++F+ K+ ++++ ++I G+ +S + +LFR M + D T
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
T++ G Q++ + + G+ D + LL G ++KA EVFD +
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 122 K----DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
D+ I+T+MI G ++ +LF ++++ + P+ + Y +++ L++
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQ 557
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+ K M ED G P Y L R G + + I+ M +
Sbjct: 558 EAYALLKKMKED-GPLPNSGTYNTLIRAHLRDGDKAASAELIREM-------------RS 603
Query: 238 CRIHGNVELGELAAAKLSD 256
CR G+ L A L D
Sbjct: 604 CRFVGDASTIGLVANMLHD 622
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 6/193 (3%)
Query: 23 ILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEE 82
+ ++ +I + + + AL L +M++ P TL+++L+ +S + +
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 83 YIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIHG 138
+ G D T+L+H +A + DR+ + +L + ++N G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 139 MGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKH 198
+ A+NL +KM +I D +++ +I+ + V+D L FK M E GI P V
Sbjct: 240 DTDLALNLLNKMEA-AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVT 297
Query: 199 YTCLADLLGRVGQ 211
Y+ L L G+
Sbjct: 298 YSSLISCLCSYGR 310
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 6/219 (2%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
L +R+ D N+ + ++I + EA LF RM + +RP+ T + ++
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAR----EVFDRVTDKD 123
G L + GL L SL++ + K G I A E+ ++ +
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 124 LTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFF 183
+ +TS++ Y G N+A+ L+H+MT + I P +T++L +GL+ D +K F
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMT-GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 184 KSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
M E + + P Y + + G + A + ++ M
Sbjct: 531 NEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 123/281 (43%), Gaps = 16/281 (5%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N +++ MI GY + G ++A + + M I PD + ++ G S+ +
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKA----REVFDRVTDKDLTIWTSMINCYAIH 137
+ ++ +L++ T LLH + + G +++A +E+ R D DL + +I+ H
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
L +M + + PD ++YTS++ A S +G ++ + M + G P
Sbjct: 661 KDRKLFFGLLKEMH-DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-GCVPNEV 718
Query: 198 HYTCLADLL---GRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELG---ELAA 251
YT + + L G V + ++ +Q + + C L G V++ EL
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVDMQKAVELHN 777
Query: 252 AKLSDLSPGSSGSYVLMANLYTSLGKWKEAH--IMRNLIDG 290
A L L ++ +Y ++ + G+ +EA I R + DG
Sbjct: 778 AILKGLL-ANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 127/272 (46%), Gaps = 23/272 (8%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
++T ++ G ++ +A ++FR M I PD + +++ + LG++ K I + +
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL----TIWTSMINCYAIHGMG 140
GL + + LL + + G I+KA+E+ D ++ K L + ++I+ Y G
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
EA LF +M + + ++PD+ VYT+++ C VE + F + + G A + +
Sbjct: 714 AEAFRLFDEMKL-KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK--GCASSTAPFN 770
Query: 201 CLADLLGRVGQLDLAVDAIQ----------GMPLDVQAQAWSCLLSACRIHGNVELGE-- 248
L + + + G+ +L + + G P DV ++ ++ GN+E +
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV---TYNIMIDYLCKEGNLEAAKEL 827
Query: 249 LAAAKLSDLSPGSSGSYVLMANLYTSLGKWKE 280
+ ++L P + +Y + N Y +G+ E
Sbjct: 828 FHQMQNANLMP-TVITYTSLLNGYDKMGRRAE 858
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 27 TSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYL 86
T +I Y + G EA +R MV I D T +++ + +EI +
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 87 YGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT----IWTSMINCYAIHGMGNE 142
G+ D L++ +SK G++QKA +FD + ++ LT I+ ++ + G +
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 143 AINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCL 202
A L +M+V + + P+A+ Y +I+ SG + + + F M G+ P YT L
Sbjct: 681 AKELLDEMSV-KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLVPDSFVYTTL 738
Query: 203 ADLLGRVGQLDLAV 216
D R+ ++ A+
Sbjct: 739 VDGCCRLNDVERAI 752
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 107/251 (42%), Gaps = 18/251 (7%)
Query: 2 YAKCDNLTSARRIFDLTAGK----NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
++K N+ A IFD + N++ + ++ G+ +SG +A +L M + P+
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T T++ G L++ + + + L GL D V T+L+ + +++A +F
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Query: 118 RVTDK-----DLTIWTSMINCYAIHG---MGNEAINLFHKMTVEERIMPDAIVYTSILLA 169
T+K + ++IN G + E +N + + P+ + Y ++
Sbjct: 757 --TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 170 CSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLA---DLLGRVGQLDLAVDAIQGMPLDV 226
G +E + F M ++ + PTV YT L D +GR ++ D ++
Sbjct: 815 LCKEGNLEAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 227 QAQAWSCLLSA 237
+S +++A
Sbjct: 874 DHIMYSVIINA 884
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 124/291 (42%), Gaps = 22/291 (7%)
Query: 29 MIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYG 88
+I G+A+SG P++AL L T + ATL +++SA AD G + + + E + G
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 89 LDLDQQVQTSLLHMYSKCGSIQKAR----EVFDRVTDKDLTIWTSMINCYAIHGMGNEAI 144
+ + +LL Y K G ++ A E+ R D ++ +I+ Y G A
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 145 NLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLAD 204
+ +M + + P++ V++ +L G + + K M + G+ P + Y + D
Sbjct: 395 IVLKEMEAGD-VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM-KSIGVKPDRQFYNVVID 452
Query: 205 LLGRVGQLDLAVDAIQGM---PLDVQAQAWSCLLSACRIHGNVELGE--LAAAKLSDLSP 259
G+ LD A+ M ++ W+ L+ HG + E A + P
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 260 GSSGSYVLMANLYTS----------LGKWKEAHIMRNLIDGKELVKECGRS 300
++ +Y +M N Y LGK K I+ N++ LV G+S
Sbjct: 513 CAT-TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
+++ +I Y +G A + + M D++P+ + +L+ D G K ++ + +
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV----TDKDLTIWTSMINCYAIHGMG 140
G+ D+Q ++ + K + A FDR+ + D W ++I+C+ HG
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 495
Query: 141 NEAINLFHKMTVEER-IMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHY 199
A +F M E R +P A Y ++ + +D + M GI P V +
Sbjct: 496 IVAEEMFEAM--ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ-GILPNVVTH 552
Query: 200 TCLADLLGRVGQLDLAVDAIQGM 222
T L D+ G+ G+ + A++ ++ M
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEM 575
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 96/232 (41%), Gaps = 10/232 (4%)
Query: 2 YAKCDNLTSARRIF-DLTAG---KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
Y SAR + ++ AG N ++ ++AG+ G + + + M ++PD
Sbjct: 384 YVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 443
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
V+ L + + G++ D+ +L+ + K G A E+F+
Sbjct: 444 RQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFE 503
Query: 118 RVTDKD----LTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
+ + T + MIN Y ++ L KM + I+P+ + +T+++ S
Sbjct: 504 AMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMK-SQGILPNVVTHTTLVDVYGKS 562
Query: 174 GLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLD 225
G D ++ + M + G+ P+ Y L + + G + AV+A + M D
Sbjct: 563 GRFNDAIECLEEM-KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 613
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 10/210 (4%)
Query: 2 YAKCDNLTSARRIFD----LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRT-DIRP 56
Y +++SAR +FD + N+ ++ ++ GY G +AL + RMV + P
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
D T T+L A + G LS +E+ + GL ++ +L++ Y K GS+++A ++
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 117 DRVTD----KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
+ + DL + +IN G E + L M ++ PD + Y +++ C
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK-SLKLQPDVVTYNTLIDGCFE 357
Query: 173 SGLVEDGLKFFKSMHEDFGIAPTVKHYTCL 202
GL + K + M D A V H L
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISL 387
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 37/197 (18%)
Query: 30 IAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYGL 89
++ Y G P AL +F++M+R ++P+ T T+L
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIG---------------------- 175
Query: 90 DLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTI----WTSMINCYAIHGMGNEAIN 145
L Y SI AREVFD + +++ + ++N Y + G +A+
Sbjct: 176 ----------LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG 225
Query: 146 LFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADL 205
+ +M E ++ PD + Y +IL A S G + D + M ++ G+ P Y L
Sbjct: 226 MLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN-GLVPNRVTYNNLVYG 284
Query: 206 LGRVGQLDLAVDAIQGM 222
++G L A ++ M
Sbjct: 285 YCKLGSLKEAFQIVELM 301
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 114/247 (46%), Gaps = 13/247 (5%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
++ ++ ++ +++ +T++I ++GH AL LF +M IRPD ++++
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD----KD 123
+ G + + + D +L+ + K G A E+++ + +
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 124 LTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFF 183
+ +TS+IN + + G +EA +F+ M + PD + YTS++ V+D +K F
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKG-CFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 184 KSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAI-----QGMPLDVQAQAWSCLLSAC 238
M + G+ YT L G+VG+ ++A + +G+P ++ + ++ LL
Sbjct: 341 YEMSQK-GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI--RTYNVLLHCL 397
Query: 239 RIHGNVE 245
+G V+
Sbjct: 398 CYNGKVK 404
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+++++ ++I + + G +A +L+ M+R I P+ T ++++ G + + +++
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT----IWTSMINCYAIH 137
+ G D TSL++ + KC + A ++F ++ K LT +T++I +
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH--EDFGIAPT 195
G N A +F M V + P+ Y +L ++G V+ L F+ M E G+AP
Sbjct: 366 GKPNVAQEVFSHM-VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 196 VKHYTCLADLLGRVGQLDLAVDAIQGM 222
+ Y L L G+L+ A+ + M
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 7/218 (3%)
Query: 10 SARRIFDLTAG-KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSAC 68
S R+ DL+ + ++ ++ S EALDLF MV + P +L+
Sbjct: 23 SFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVI 82
Query: 69 ADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDL 124
A + + +++ + G+ D L++ + + A ++ + D+
Sbjct: 83 AKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDI 142
Query: 125 TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFK 184
+TS+IN + + EA+++ ++M VE I PD ++YT+I+ + +G V L F
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQM-VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201
Query: 185 SMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
M E++GI P V YT L + L G+ A ++GM
Sbjct: 202 QM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 9/232 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRR-MVRTDIRPDGATLATVLSACADLGSLSKGQEI 80
N ++ +I+G ++G+ +ALDL+ M D P T ++ + G L + +++
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 81 EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAI 136
E + YG + + L++ + K G A +F R+ + DL ++ +++C +
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 137 HGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTV 196
G +E ++ F ++ E + PD + Y I+ S +E+ L F M GI P +
Sbjct: 974 VGRVDEGLHYFKELK-ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 197 KHYTCLADLLGRVGQLDLA---VDAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
Y L LG G ++ A + IQ L+ ++ L+ + G E
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N+ ++ ++I G + +AL+LF M ++P T + G E
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD----KDLTIWTSMINCYAIH 137
E + G+ + + L+ +K G ++A+++F + D D + M+ CY+
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
G +EAI L +M +E PD IV S++ + V++ K F M E + PTV
Sbjct: 517 GEIDEAIKLLSEM-MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE-MKLKPTVV 574
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGM 222
Y L LG+ G++ A++ +GM
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGM 599
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 6/205 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N S+ +I +S EA++++RRM+ RP T ++++ + +
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ + GL + T + + + G I +A E+ R+ D+ D+ +T +I+
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
+ A +F KM R PD + Y ++L S + ++ +F+ M +D G P V
Sbjct: 307 RKLDCAKEVFEKMKT-GRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD-GHVPDVV 364
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGM 222
+T L D L + G A D + M
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVM 389
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 36/204 (17%)
Query: 3 AKCDNLTSARRIF----DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDG 58
+K L A+++F D N + +I G+ ++G A LF+RMV+ +RPD
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 59 ATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDR 118
T + ++ +G + +G LH + +E+ +
Sbjct: 962 KTYSVLVDCLCMVGRVDEG----------------------LHYF---------KELKES 990
Query: 119 VTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
+ D+ + +IN EA+ LF++M I PD Y S++L +G+VE+
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCL 202
K + + G+ P V + L
Sbjct: 1051 AGKIYNEIQRA-GLEPNVFTFNAL 1073
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 112/277 (40%), Gaps = 28/277 (10%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N+ ++T I ++G EA ++ +RM PD T ++ A L +E+
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD----KDLTIWTSMINCYAIH 137
E + D+ +LL +S + ++ + + D+ +T +++
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
G EA + M ++ I+P+ Y +++ ++D L+ F +M E G+ PT
Sbjct: 377 GNFGEAFDTLDVMR-DQGILPNLHTYNTLICGLLRVHRLDDALELFGNM-ESLGVKPTAY 434
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAA----- 252
Y D G+ G A++ + M + + + + AC N L LA A
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKM----KTKGIAPNIVAC----NASLYSLAKAGRDRE 486
Query: 253 ------KLSD--LSPGSSGSYVLMANLYTSLGKWKEA 281
L D L P S +Y +M Y+ +G+ EA
Sbjct: 487 AKQIFYGLKDIGLVPDSV-TYNMMMKCYSKVGEIDEA 522
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 2 YAKCDNLTSARRIFDLTAGK----NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
Y K + SA F+ K NI++ + + A++G EA +F + + PD
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T ++ + +G + + ++ + G + D V SL++ K + +A ++F
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 118 RVTDKDL----TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
R+ + L + +++ +G EAI LF M V++ P+ I + ++ +
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM-VQKGCPPNTITFNTLFDCLCKN 621
Query: 174 GLVEDGLK-FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAV 216
V LK FK M D G P V Y + L + GQ+ A+
Sbjct: 622 DEVTLALKMLFKMM--DMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 112/233 (48%), Gaps = 13/233 (5%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+++ +T++I + +AL+LF M IRP+ T +++ + G S +
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD----RVTDKDLTIWTSMINCYAIH 137
+ ++ + ++L+ + K G + +A +++D R D D+ ++S+IN + +H
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
+EA ++F M + + P+ + Y +++ + VE+G++ F+ M + + TV
Sbjct: 374 DRLDEAKHMFELM-ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 198 HYTCLADLLGRVGQLDLAVDAIQ-----GMPLDVQAQAWSCLLSACRIHGNVE 245
+ T + L + G D+A + G+P D+ +S LL +G +E
Sbjct: 433 YNTLIQGLF-QAGDCDMAQKIFKKMVSDGVPPDI--ITYSILLDGLCKYGKLE 482
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 10/225 (4%)
Query: 6 DNLTSARRIFDLTAGK----NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
D L A+ +F+L K N++++ ++I G+ ++ E ++LFR M + + + T
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT- 120
T++ G Q+I + + G+ D + LL K G ++KA VF+ +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 121 ---DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+ D+ + MI G + +LF ++++ + P+ I+YT+++ GL E
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTTMISGFCRKGLKE 552
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
+ F+ M ED G P Y L R G + + I+ M
Sbjct: 553 EADALFREMKED-GTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 90/196 (45%), Gaps = 6/196 (3%)
Query: 13 RIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLG 72
++F + N +++ ++I G +EA+ L RMV +PD T TV++ G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 73 SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWT 128
+ + + + ++ D + T+++ ++ A +F + +K ++ +
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 129 SMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHE 188
S+I C +G ++A L M +E +I P+ + +++++ A G + + K + M +
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 189 DFGIAPTVKHYTCLAD 204
I P + Y+ L +
Sbjct: 354 R-SIDPDIFTYSSLIN 368
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 8 LTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSA 67
++ R+ +L ++ S+ +I + + AL + +M++ PD TL+++L+
Sbjct: 100 ISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG 159
Query: 68 CADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----D 123
+S+ + + +++ + +L+H +A + DR+ + D
Sbjct: 160 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD 219
Query: 124 LTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFF 183
L + +++N G + A++L KM + +I D ++YT+I+ A + V D L F
Sbjct: 220 LFTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 184 KSMHEDFGIAPTVKHYTCLADLLGRVGQ 211
M ++ GI P V Y L L G+
Sbjct: 279 TEM-DNKGIRPNVVTYNSLIRCLCNYGR 305
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 1 MYAKCDNLTSARRIF----DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRP 56
M A D + A+RI D ++ +MIA Y + G ++A+DL+ M +T ++P
Sbjct: 559 MLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKP 618
Query: 57 DGATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVF 116
+ ++++ A+ G + + + + +G+ + V TSL+ YSK G +++AR V+
Sbjct: 619 NEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVY 678
Query: 117 DRVTD----KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
D++ D D+ SM++ A G+ +EA ++F+ + E+ D I + +++
Sbjct: 679 DKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL--REKGTCDVISFATMMYLYKG 736
Query: 173 SGLVEDGLKFFKSMHE 188
G++++ ++ + M E
Sbjct: 737 MGMLDEAIEVAEEMRE 752
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N + TS+I Y++ G EA ++ +M ++ PD A ++LS CADLG +S+ + I
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ G D +++++Y G + +A EV + + + D T + ++ CYA
Sbjct: 714 NALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAAD 772
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
G +E LFH+M VE +++ D + ++ G+ + + ++ + +
Sbjct: 773 GQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNE 824
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 112/280 (40%), Gaps = 42/280 (15%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
++L + MI Y ++ +AL LF+ M PD T ++ A
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLA------------ 561
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMGN 141
G+DL + Q L E+ D + +MI Y G+ +
Sbjct: 562 ------GVDLVDEAQRILA-------------EMLDSGCKPGCKTYAAMIASYVRLGLLS 602
Query: 142 EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTC 201
+A++L+ M + + P+ +VY S++ + SG+VE+ +++F+ M E+ G+ T
Sbjct: 603 DAVDLYEAME-KTGVKPNEVVYGSLINGFAESGMVEEAIQYFR-MMEEHGVQSNHIVLTS 660
Query: 202 LADLLGRVGQLDLA---VDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKLSDLS 258
L +VG L+ A D ++ A + +LS C G V E L +
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Query: 259 PGSSGSYVLMANLYTSLGKWKEAHIMRNLIDGKELVKECG 298
S+ M LY +G EA I+ E ++E G
Sbjct: 721 TCDVISFATMMYLYKGMGMLDEA------IEVAEEMRESG 754
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+++ ++++I + H +AL+LF M IRPD T ++++S + G S +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD----RVTDKDLTIWTSMINCYAIH 137
+ ++ + SL+ ++K G + +A ++FD R D ++ + S+IN + +H
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
+EA +F M V + +PD + Y +++ + V DG++ F+ M + TV
Sbjct: 359 DRLDEAQQIFTLM-VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 198 HYT 200
+ T
Sbjct: 418 YTT 420
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 2 YAKCDNLTSARRIFD----LTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
+AK L A ++FD + NI+++ S+I G+ EA +F MV D PD
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T T+++ + G E+ + GL + T+L+H + + A+ VF
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 118 R-VTD---KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
+ V+D ++ + ++++ +G +A+ +F + + ++ PD Y + +
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ-KSKMEPDIYTYNIMSEGMCKA 498
Query: 174 GLVEDGLKFFKSMHEDFGIAPTVKHYTCL 202
G VEDG F S+ G+ P V Y +
Sbjct: 499 GKVEDGWDLFCSLSLK-GVKPDVIAYNTM 526
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)
Query: 6 DNLTSARRIFDLTAGKN----ILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
D L A++IF L K+ ++++ ++I G+ ++ + ++LFR M R + + T
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT- 120
T++ Q + + + G+ + +LL K G ++KA VF+ +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 121 ---DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
+ D+ + M G + +LF ++++ + PD I Y +++ GL E
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG-VKPDVIAYNTMISGFCKKGLKE 537
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCL 202
+ F M ED G P Y L
Sbjct: 538 EAYTLFIKMKED-GPLPDSGTYNTL 561
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
++ +++S+I+ G ++A L M+ I P+ T +++ A A G L + +++
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ + +D + SL++ + + +A+++F + K D+ + ++IN +
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
+ + LF M+ ++ + + YT+++ + ++ FK M D G+ P +
Sbjct: 394 KKVVDGMELFRDMS-RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIM 451
Query: 198 HYTCLADLLGRVGQLDLAV 216
Y L D L + G+L+ A+
Sbjct: 452 TYNTLLDGLCKNGKLEKAM 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 90/201 (44%), Gaps = 12/201 (5%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+ +++T+++ G Q +EA+ L RMV +PD T V++ G +
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ ++ D + ++++ K + A +F + +K D+ ++S+I+C +
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
G ++A L M +E +I P+ + + S++ A + G + + K F M + I P +
Sbjct: 289 GRWSDASRLLSDM-LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIV 346
Query: 198 HYT------CLADLLGRVGQL 212
Y C+ D L Q+
Sbjct: 347 TYNSLINGFCMHDRLDEAQQI 367
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 15 FDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACAD--LG 72
FD+ +++ +T MI Y + LF+ M R +I PD T +L + L
Sbjct: 692 FDVIP--DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLS 749
Query: 73 SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV----TDKDLTIWT 128
K +++ ++ Y + +D Q K G + +A+ +FD++ D D +T
Sbjct: 750 REMKAFDVKPDVFYYTVLIDWQ---------CKIGDLGEAKRIFDQMIESGVDPDAAPYT 800
Query: 129 SMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHE 188
++I C G EA +F +M +E + PD + YT+++ C +G V +K K M E
Sbjct: 801 ALIACCCKMGYLKEAKMIFDRM-IESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLE 859
Query: 189 DFGIAPT 195
GI PT
Sbjct: 860 K-GIKPT 865
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 100/198 (50%), Gaps = 6/198 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
++ ++++I G+ ++ + +A+D+F +M++ R + ++++L +G+ S+ ++
Sbjct: 325 DVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLF 384
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ + LD+ K G +++A E+F +T K D+ +T++I +
Sbjct: 385 KEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQ 444
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
G ++A +L +M + PD ++Y + + +GL ++ + K M E+ G+ PT
Sbjct: 445 GKCSDAFDLMIEMDGTGKT-PDIVIYNVLAGGLATNGLAQEAFETLK-MMENRGVKPTYV 502
Query: 198 HYTCLADLLGRVGQLDLA 215
+ + + L G+LD A
Sbjct: 503 THNMVIEGLIDAGELDKA 520
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 28 SMIAGYAQSGHPAEALDLFRRMVRTDIR-PDGATLATVLSACADLGSLSKGQEIEEYIYL 86
SM+ G+ +G A F R +R + P S CA+ +SK Q++ + ++
Sbjct: 537 SMVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWK 593
Query: 87 YGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIHGMGNE 142
G++ ++ + L+ + + +++KARE F+ + K DL +T MIN Y +
Sbjct: 594 LGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQ 653
Query: 143 AINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCL 202
A LF M + + PD + Y+ +L + + K E F + P V +YT +
Sbjct: 654 AYALFEDMKRRD-VKPDVVTYSVLLNSDPELDM--------KREMEAFDVIPDVVYYTIM 704
Query: 203 AD 204
+
Sbjct: 705 IN 706
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 87 YGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIHGMGNE 142
+G+D D V ++++ + K +I KA +VF+++ K + I +S++ CY G +E
Sbjct: 320 HGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSE 379
Query: 143 AINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCL 202
A +LF + E I D + Y A G VE+ ++ F+ M GIAP V +YT L
Sbjct: 380 AYDLFKEFR-ETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGK-GIAPDVINYTTL 437
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N+++++S+I+ G ++A L M+ I P+ T ++ A G + +++
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ + +D D SL++ + + KA+++F+ + K DL + ++I +
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
+ LF +M+ ++ D + YT+++ H G ++ K FK M D G+ P +
Sbjct: 339 KRVEDGTELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIM 396
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGM 222
Y+ L D L G+L+ A++ M
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYM 421
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+++ + ++I + H +AL+LF+ M IRP+ T ++++S G S ++
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD----RVTDKDLTIWTSMINCYAIH 137
+ ++ + +L+ + K G +A ++ D R D D+ + S+IN + +H
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
++A +F M V + PD Y +++ S VEDG + F+ M + TV
Sbjct: 304 DRLDKAKQMFEFM-VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 198 HYTCLADLLGRVGQLDLAVDAIQ-----GMPLDVQAQAWSCLLSACRIHGNVE 245
YT L L G D A + G+P D+ +S LL +G +E
Sbjct: 363 -YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI--MTYSILLDGLCNNGKLE 412
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 23/259 (8%)
Query: 6 DNLTSARRIFDLTAGKNIL----SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
D L A+++F+ K+ ++ ++I G+ +S + +LFR M + D T
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD 121
T++ G Q++ + + G+ D + LL G ++KA EVFD +
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 122 K----DLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
D+ I+T+MI G ++ +LF ++++ + P+ + Y +++ L++
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQ 482
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSA 237
+ K M ED G P Y L R G + + I+ M +
Sbjct: 483 EAYALLKKMKED-GPLPDSGTYNTLIRAHLRDGDKAASAELIREM-------------RS 528
Query: 238 CRIHGNVELGELAAAKLSD 256
CR G+ L A L D
Sbjct: 529 CRFVGDASTIGLVANMLHD 547
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 6/194 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N+ ++ +I + + + AL L +M++ P TL+++L+ +S +
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ + G D T+L+H +A + DR+ + +L + ++N
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
G + A NL +KM +I D +++ +I+ + V+D L FK M E GI P V
Sbjct: 164 GDIDLAFNLLNKMEA-AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVV 221
Query: 198 HYTCLADLLGRVGQ 211
Y+ L L G+
Sbjct: 222 TYSSLISCLCSYGR 235
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 120/259 (46%), Gaps = 12/259 (4%)
Query: 2 YAKCDNLTSARRIF----DLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
+ K L +AR +F N+ + +I G+ +SG+ EA+ L M ++ PD
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T +++ +++ + + + + SL+H Y K ++++A ++
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 118 RVT----DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
+T + ++ ++++I+ Y A+ L+ +MT++ I+PD + YT+++ A
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG-IVPDVVTYTALIDAHFKE 492
Query: 174 GLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSC 233
+++ L+ + M E GI P + CL D + G+L +A+D Q + Q W+
Sbjct: 493 ANMKEALRLYSDMLEA-GIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN--NQQRSCWNH 549
Query: 234 LLSACRIHGNVELGELAAA 252
+ C I G + G + A
Sbjct: 550 VGFTCLIEGLCQNGYILRA 568
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 10/207 (4%)
Query: 6 DNLTSARRIFDLTAG----KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
+ + A ++F+L N+ ++++MI GY ++G+ +A L++ ++ ++ P+
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT- 120
T++ L + + ++ +G+D + V L+H + K G++ +A + +
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 121 ---DKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
D+ +T +IN I EA LF KM ERI P + Y S++ +E
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK-NERIFPSSATYNSLIHGYCKEYNME 426
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLAD 204
L M G+ P + ++ L D
Sbjct: 427 QALDLCSEMTAS-GVEPNIITFSTLID 452
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 138/306 (45%), Gaps = 31/306 (10%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N++++T+++ G S ++A L M++ I P+ T + +L A G + + +E+
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
E + +D D +SL++ I +A ++FD + K D+ + ++IN +
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
+ + LF +M+ + ++ + + Y +++ +G V+ +FF M + FGI+P +
Sbjct: 344 KRVEDGMKLFREMS-QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIW 401
Query: 198 HYTCLADLLGRVGQLDLAV---DAIQGMPLDVQAQAWSCLLSACRIHGNVE--LGELAAA 252
Y L L G+L+ A+ + +Q +D+ ++ ++ G VE +
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 253 KLSDLSPGSSGSYVLMANLYTS---------LGKWKEAHIMRN---LIDGK-----ELVK 295
L L P +M+ L T K K+ +M+N L DG EL+K
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIK 521
Query: 296 E---CG 298
+ CG
Sbjct: 522 KMLSCG 527
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 108/232 (46%), Gaps = 7/232 (3%)
Query: 6 DNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVL 65
D ++ ++ ++ +I+++ ++I ++ +A D F+ + R IRP+ T ++
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 66 SACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----D 121
+ + S + + + + ++LL + K G + +A+E+F+ + D
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 122 KDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLK 181
D+ ++S+IN +H +EA +F M V + + D + Y +++ + VEDG+K
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLM-VSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 182 FFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMP-LDVQAQAWS 232
F+ M + ++ TV + T + + G +D A + M + W+
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFF-QAGDVDKAQEFFSQMDFFGISPDIWT 402
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%), Gaps = 9/192 (4%)
Query: 6 DNLTSARRIFDLTAGK----NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATL 61
D + A ++FDL K +++S+ ++I G+ ++ + + LFR M + + + T
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 62 ATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD---- 117
T++ G + K QE + +G+ D LL G ++KA +F+
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 118 RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
R D D+ +T++I G EA +LF ++++ + PD + YT+++ GL+
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG-LKPDIVTYTTMMSGLCTKGLLH 487
Query: 178 DGLKFFKSMHED 189
+ + M ++
Sbjct: 488 EVEALYTKMKQE 499
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 41 EALDLFRRMVRTDIRPDGATLATVLSACADLGS----LSKGQEIEEYIYLYGLDLDQQVQ 96
+A+DLF MV++ P +LSA L +S G+++E + G+ D
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME----VLGIRNDLYTF 123
Query: 97 TSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMINCYAIHGMGNEAINLFHKMTV 152
+++ + C + A + ++ + D S++N + ++A++L KM V
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM-V 182
Query: 153 EERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLAD 204
E PD + Y +I+ + + V D FFK + E GI P V YT L +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVN 233
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 8/211 (3%)
Query: 18 TAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKG 77
T G + + +M+ Y++SG ++A +L M + PD + T+++A G L+
Sbjct: 220 TVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN 279
Query: 78 QEIE--EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMI 131
+E + + GL D +LL S+ ++ A +VF+ + DL + +MI
Sbjct: 280 LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI 339
Query: 132 NCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFG 191
+ Y G+ EA LF ++ ++ PDA+ Y S+L A + E + ++ M + G
Sbjct: 340 SVYGRCGLAAEAERLFMELELKG-FFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK-MG 397
Query: 192 IAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
Y + + G+ GQLDLA+ + M
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 151/358 (42%), Gaps = 61/358 (17%)
Query: 1 MYAKCDNLTSARRIFDLTAGK----NILSWTSMIAGYAQSG--HPAEALDLFRRMVRTDI 54
+Y++ + A+ + D + +++S+ ++I +SG P A++L + + +
Sbjct: 234 VYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGL 293
Query: 55 RPDGATLATVLSACADLGSLSKGQEIEE----------------YIYLYG---------- 88
RPD T T+LSAC+ +L ++ E I +YG
Sbjct: 294 RPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAER 353
Query: 89 ----LDL-----DQQVQTSLLHMYSKCGSIQKAREVFDRVTD----KDLTIWTSMINCYA 135
L+L D SLL+ +++ + +K +EV+ ++ KD + ++I+ Y
Sbjct: 354 LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYG 413
Query: 136 IHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPT 195
G + A+ L+ M PDAI YT ++ + + + M D GI PT
Sbjct: 414 KQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML-DVGIKPT 472
Query: 196 VKHYTCLADLLGRVGQLDLAVDAIQGM------PLDVQAQAWSCLLSACRIHGNVELGEL 249
++ Y+ L + G+ + A D M P ++ A+S +L + GN E +
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL---AYSVMLDVL-LRGN-ETRKA 527
Query: 250 AAAKLSDLSPGSSGSYVLMANLYTSLGKWKEA-HIMRNLIDGKELVKECGRSQVEVKA 306
+S G + SY L + L K + I + + D +EL CG + +E+ +
Sbjct: 528 WGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL---CGMNPLEISS 582
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 10/190 (5%)
Query: 63 TVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK 122
T+L C ++ ++ + L G + + V S++ +Y K G + A +V ++ K
Sbjct: 686 TLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETK 745
Query: 123 DL-----TIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVE 177
++T +I Y + +A ++ + R PD + S++ A + G E
Sbjct: 746 GFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRT-PDLKTWNSLMSAYAQCGCYE 804
Query: 178 DGLKFFKSMHEDFGIAPTVKHYTCLADLL---GRVGQLDLAVDAIQGMPLDVQAQAWSCL 234
F +M D G +PTV+ L L GR+ +L + V+ +Q M + + +
Sbjct: 805 RARAIFNTMMRD-GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 235 LSACRIHGNV 244
L A GN+
Sbjct: 864 LDAFARAGNI 873
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 134/299 (44%), Gaps = 21/299 (7%)
Query: 8 LTSARRIFDLTAGKNI------LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIR-PDGAT 60
+ +A + ++ KN+ +++I+G+ + G P AL F V + + P+ T
Sbjct: 150 MDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVT 209
Query: 61 LATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKA----REVF 116
T++SA LG + + +++ + G + D ++ +H Y K G++ A RE+
Sbjct: 210 YTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMV 269
Query: 117 DRVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLV 176
++ ++D+ ++ +I+ + G EA+ L KM ++E + P+ I YT+I+ G +
Sbjct: 270 EKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM-IKEGVEPNLITYTAIIRGLCKMGKL 328
Query: 177 EDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS 236
E+ F + GI Y L D + R G L+ A + M + + S L
Sbjct: 329 EEAFVLFNRILS-VGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM--EQRGIQPSILTY 385
Query: 237 ACRIHGNVELGELAAAKLSDLSPGSSGSYVLMANLYTSLGKWKEA----HIMRNLIDGK 291
I+G G ++ A ++S G G + + L S K + I R ++ K
Sbjct: 386 NTVINGLCMAGRVSEA--DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAK 442
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 26 WTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIY 85
+ ++I G + G+ A + M + I+P T TV++ G +S+ E+ +
Sbjct: 350 YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK--- 406
Query: 86 LYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIHGMGN 141
G+ D ++LL Y K +I E+ R + DL + ++ + + G
Sbjct: 407 --GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYG 464
Query: 142 EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTC 201
EA L+ M E + PD Y +++ +G +E+ L+ F + + A Y
Sbjct: 465 EADALYRAMP-EMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVC--YNR 521
Query: 202 LADLLGRVGQLDLAVDAI-----QGMPLDVQA 228
+ D L + G LD A + + +G+ LD+
Sbjct: 522 IIDALCKKGMLDTATEVLIELWEKGLYLDIHT 553
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 87/181 (48%), Gaps = 5/181 (2%)
Query: 13 RIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLG 72
+I L N++ + ++I + G ALD+ + M + IRPD T ++++ G
Sbjct: 174 QIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSG 233
Query: 73 SLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAR----EVFDRVTDKDLTIWT 128
+ I + G+ D ++L+ +Y K G + +A+ E+ R + ++ +
Sbjct: 234 TWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYN 293
Query: 129 SMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHE 188
S+IN IHG+ +EA + + + V + P+A+ Y +++ + V+DG+K M
Sbjct: 294 SLINGLCIHGLLDEAKKVLNVL-VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR 352
Query: 189 D 189
D
Sbjct: 353 D 353
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 107/228 (46%), Gaps = 6/228 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+++ + ++I G + G +A++LF RM R +R D T ++++ G S +
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD----RVTDKDLTIWTSMINCYAIH 137
+ + + + T+++ ++ K G +A ++++ R D D+ + S+IN +H
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
G +EA + M V + +PD + Y +++ S V++G K F+ M + + T+
Sbjct: 293 GRVDEAKQMLDLM-VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLSACRIHGNVE 245
+ T + + G+ D A + M + +S LL ++ VE
Sbjct: 352 YNTIIQGYF-QAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVE 398
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 19/195 (9%)
Query: 11 ARRIFDLTAGK----NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLS 66
A+++ DL K +++++ ++I G+ +S E LFR M + + D T T++
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 67 ACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGS--IQKAREVFDRVTDKDL 124
G QEI +D ++T + +Y C + ++KA +F+ + ++
Sbjct: 358 GYFQAGRPDAAQEI-----FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 125 TIWTSMINCYAIHGM---GN--EAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDG 179
+ + N IHGM GN +A +LF ++ + + PD + YT+++ +
Sbjct: 413 ELDITTYN-IVIHGMCKIGNVEDAWDLFRSLSCKG-LKPDVVSYTTMISGFCRKRQWDKS 470
Query: 180 LKFFKSMHEDFGIAP 194
++ M ED G+ P
Sbjct: 471 DLLYRKMQED-GLLP 484
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N +++ +I Y ++ + EA+++F +M +PD T T++ A G L ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ + GL D + +++ K G + A ++F + D+ +L + M++ +A
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
A+ L+ M PD + Y+ ++ H G +E+ F M + I P
Sbjct: 518 RNYQNALKLYRDMQ-NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEP 575
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGM 222
Y L DL G+ G ++ A Q M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
++T+M+ ++ L MVR +P+ T ++ + L++ + +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMINCYAIHGMG 140
G D+ +L+ +++K G + A +++ R+ D ++ +INC G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
A LF +M V++ P+ + Y ++ + + ++ LK ++ M ++ G P Y+
Sbjct: 486 PAAHKLFCEM-VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYS 543
Query: 201 CLADLLGRVGQLDLAVDAIQGMPLDVQAQAW 231
+ ++LG G L+ A + + ++Q + W
Sbjct: 544 IVMEVLGHCGYLEEA----EAVFTEMQQKNW 570
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N +++ +I Y ++ + EA+++F +M +PD T T++ A G L ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ + GL D + +++ K G + A ++F + D+ +L + M++ +A
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
A+ L+ M PD + Y+ ++ H G +E+ F M + I P
Sbjct: 518 RNYQNALKLYRDMQ-NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEP 575
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGM 222
Y L DL G+ G ++ A Q M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
++T+M+ ++ L MVR +P+ T ++ + L++ + +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMINCYAIHGMG 140
G D+ +L+ +++K G + A +++ R+ D ++ +INC G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
A LF +M V++ P+ + Y ++ + + ++ LK ++ M ++ G P Y+
Sbjct: 486 PAAHKLFCEM-VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYS 543
Query: 201 CLADLLGRVGQLDLAVDAIQGMPLDVQAQAW 231
+ ++LG G L+ A + + ++Q + W
Sbjct: 544 IVMEVLGHCGYLEEA----EAVFTEMQQKNW 570
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N +++ +I Y ++ + EA+++F +M +PD T T++ A G L ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
+ + GL D + +++ K G + A ++F + D+ +L + M++ +A
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
A+ L+ M PD + Y+ ++ H G +E+ F M + I P
Sbjct: 518 RNYQNALKLYRDMQ-NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEP 575
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGM 222
Y L DL G+ G ++ A Q M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
++T+M+ ++ L MVR +P+ T ++ + L++ + +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMINCYAIHGMG 140
G D+ +L+ +++K G + A +++ R+ D ++ +INC G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
A LF +M V++ P+ + Y ++ + + ++ LK ++ M ++ G P Y+
Sbjct: 486 PAAHKLFCEM-VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYS 543
Query: 201 CLADLLGRVGQLDLAVDAIQGMPLDVQAQAW 231
+ ++LG G L+ A + + ++Q + W
Sbjct: 544 IVMEVLGHCGYLEEA----EAVFTEMQQKNW 570
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 24 LSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEY 83
+++ ++I GY + G+ +AL + M+R + P T +++ + G++++ E +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 84 IYLYGLDLDQQVQTSLLHMYSKCGSIQKA----REVFDRVTDKDLTIWTSMINCYAIHGM 139
+ + GL +++ T+L+ +S+ G + +A RE+ D + + ++IN + + G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 140 GNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHY 199
+AI + M E+ + PD + Y+++L S V++ L+ + M E GI P Y
Sbjct: 431 MEDAIAVLEDMK-EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITY 488
Query: 200 TCLADLLGRVGQLDLAVDAIQ-----GMPLDVQAQAWSCLLSACRIHGNVE 245
+ L + A D + G+P D ++ L++A + G++E
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPD--EFTYTALINAYCMEGDLE 537
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
+++S++++++G+ +S EAL + R MV I+PD T ++++ + + ++
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK----DLTIWTSMINCYAIH 137
E + GL D+ T+L++ Y G ++KA ++ + + +K D+ ++ +IN
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSH 172
EA L K+ EE + P + Y +++ CS+
Sbjct: 569 SRTREAKRLLLKLFYEESV-PSDVTYHTLIENCSN 602
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 10/273 (3%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N++S+ +I G + G E + M R D T T++ G+ + +
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL----TIWTSMINCYAIH 137
+ +GL TSL+H K G++ +A E D++ + L +T++++ ++
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
G NEA + +M + P + Y +++ +G +ED + + M E G++P V
Sbjct: 394 GYMNEAYRVLREMN-DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK-GLSPDVV 451
Query: 198 HYTCLADLLGRVGQLDLAVDAIQGMP---LDVQAQAWSCLLSA-CRIHGNVELGELAAAK 253
Y+ + R +D A+ + M + +S L+ C E +L
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 254 LSDLSPGSSGSYVLMANLYTSLGKWKEAHIMRN 286
L P +Y + N Y G ++A + N
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 14/245 (5%)
Query: 7 NLTSARRIFDLTAGK----NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLA 62
N+ A +FD K N++++ ++I GY + + L R M + P+ +
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 63 TVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDK 122
V++ G + + + + G LD+ +L+ Y K G+ +A + +
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 123 DLT----IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVED 178
LT +TS+I+ G N A+ +M V + P+ YT+++ S G + +
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG-LCPNERTYTTLVDGFSQKGYMNE 398
Query: 179 GLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGMP---LDVQAQAWSCLL 235
+ + M+++ G +P+V Y L + G+++ A+ ++ M L ++S +L
Sbjct: 399 AYRVLREMNDN-GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 236 SA-CR 239
S CR
Sbjct: 458 SGFCR 462
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/197 (17%), Positives = 92/197 (46%), Gaps = 5/197 (2%)
Query: 12 RRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADL 71
R + D +++++ ++I G+ +G +A+ + M + PD + +TVLS
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 72 GSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV----TDKDLTIW 127
+ + ++ + G+ D +SL+ + + ++A ++++ + D +
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 128 TSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMH 187
T++IN Y + G +A+ L ++M VE+ ++PD + Y+ ++ + + + +
Sbjct: 524 TALINAYCMEGDLEKALQLHNEM-VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 188 EDFGIAPTVKHYTCLAD 204
+ + V ++T + +
Sbjct: 583 YEESVPSDVTYHTLIEN 599
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 6/202 (2%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
++ +++ + G P +A +++ M +TD DG+T ++ + A G L ++ + +
Sbjct: 280 TYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM 339
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMINCYAIHGMG 140
L V +SL+ K G + + +V+ + T++ S+I+ YA G
Sbjct: 340 KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKL 399
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYT 200
+ A+ L+ +M + P+ +YT I+ + + SG +E + FK M E G PT Y+
Sbjct: 400 DTALRLWDEMK-KSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDM-EKAGFLPTPSTYS 457
Query: 201 CLADLLGRVGQLDLAVDAIQGM 222
CL ++ GQ+D A+ M
Sbjct: 458 CLLEMHAGSGQVDSAMKIYNSM 479
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Query: 29 MIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYIYLYG 88
+I A+SG A LF++M +RP + ++++ + G L ++ + +G
Sbjct: 319 IIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG 378
Query: 89 LDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTD----KDLTIWTSMINCYAIHGMGNEAI 144
+ SL+ Y+K G + A ++D + + ++T +I +A G A+
Sbjct: 379 HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 438
Query: 145 NLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLAD 204
+F M + +P Y+ +L + SG V+ +K + SM + G+ P + Y L
Sbjct: 439 TVFKDME-KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM-TNAGLRPGLSSYISLLT 496
Query: 205 LLGRVGQLDLA 215
LL +D+A
Sbjct: 497 LLANKRLVDVA 507
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 44/255 (17%)
Query: 25 SWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIEEYI 84
++ +I GYA+SG +L++F M R P T +++ + + K EI + +
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 85 YLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLT------------------- 125
L G+ ++ T ++ Y+ G KA E F R+ ++ L
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 126 --------------------IWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTS 165
++ +I+ +A G EA +L +M +E + PD YTS
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTS 769
Query: 166 ILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAV---DAIQGM 222
+ ACS +G + + + M E G+ P +K YT L R + A+ + ++ M
Sbjct: 770 FISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAM 828
Query: 223 PLDVQAQAWSCLLSA 237
+ + CLL++
Sbjct: 829 GIKPDKAVYHCLLTS 843
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 10 SARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACA 69
SAR I +N + +I G+A+ G EA DL ++M + ++PD T + +SAC+
Sbjct: 721 SARNI-----PRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 70 DLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTS 129
G +++ + E + G+ + + T+L+ +++ +KA ++ + + +
Sbjct: 776 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKA 835
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ +C +L + ++ E A +Y+ ++ C +VE GL
Sbjct: 836 VYHCL--------LTSLLSRASIAE-----AYIYSGVMTICKE--MVEAGL 871
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 10/229 (4%)
Query: 2 YAKCDNLTSARRIFDLTAG----KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
+ + D + A +FD G N++ + ++I G +S ALDL RM + I PD
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T +++S G S + + + D +L+ K G + +A E ++
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 118 ----RVTDKDLTIWTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHS 173
R D D+ ++ +I ++ +EA +F M V + PD + Y+ ++ S
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM-VSKGCFPDVVTYSILINGYCKS 339
Query: 174 GLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLAVDAIQGM 222
VE G+K F M + G+ YT L R G+L++A + + M
Sbjct: 340 KKVEHGMKLFCEMSQR-GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 113/243 (46%), Gaps = 20/243 (8%)
Query: 20 GKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQE 79
G +++++ S+I+G SG ++A + M + +I PD T ++ AC G +S+ +E
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 80 IEEYIYLYGLDLDQQVQTSLLH---MYSKCGSIQKAREVFDRVTDK----DLTIWTSMIN 132
E + LD D + L++ MYS+ + +A E+F + K D+ ++ +IN
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSR---LDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 133 CYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGI 192
Y + LF +M+ + ++ + + YT ++ +G + + F+ M G+
Sbjct: 335 GYCKSKKVEHGMKLFCEMS-QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM-VFCGV 392
Query: 193 APTVKHYTCLADLLGRVGQLDLAVDAIQGMP---LDVQAQAWSCLLSACRIHGNVELGEL 249
P + Y L L G+++ A+ + M +D ++ + I G + GE+
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII-----IRGMCKAGEV 447
Query: 250 AAA 252
A A
Sbjct: 448 ADA 450
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 33/175 (18%)
Query: 21 KNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEI 80
+N +++T +I GY ++G A ++FRRMV + P+ T +L D G + K I
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 81 EEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDLTIWTSMINCYAIHGMG 140
+ G+D D ++ K G + A +++ +NC
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY------------CSLNC------- 459
Query: 141 NEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPT 195
+ +MPD YT+++L GL + F+ M ED GI P
Sbjct: 460 -------------QGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED-GILPN 500
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 103/212 (48%), Gaps = 6/212 (2%)
Query: 5 CDNLTSARRIFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATV 64
C ++ +I L N ++++++I G G +EAL+L RMV +PD T+ T+
Sbjct: 140 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199
Query: 65 LSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVTDKDL 124
++ G ++ + + + YG + +L++ K G A E+ ++ ++++
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 125 TI----WTSMINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGL 180
+ ++ +I+ HG + A NLF++M ++ I + I Y ++ ++G +DG
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAGRWDDGA 318
Query: 181 KFFKSMHEDFGIAPTVKHYTCLADLLGRVGQL 212
K + M + I P V ++ L D + G+L
Sbjct: 319 KLLRDMIKR-KINPNVVTFSVLIDSFVKEGKL 349
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 94/203 (46%), Gaps = 6/203 (2%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
NI+++ +I G+ +G + L R M++ I P+ T + ++ + G L + +E+
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 82 EYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRVT----DKDLTIWTSMINCYAIH 137
+ + G+ D TSL+ + K + KA ++ D + D ++ + +IN Y
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 138 GMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVK 197
++ + LF KM++ ++ D + Y +++ G + + F+ M + P +
Sbjct: 417 NRIDDGLELFRKMSLRG-VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIV 474
Query: 198 HYTCLADLLGRVGQLDLAVDAIQ 220
Y L D L G+ + A++ +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFE 497
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 6/201 (2%)
Query: 14 IFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGS 73
+ D N++++ ++I G+ + G A DLF+ M + I PD +T++ G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 74 LSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV----TDKDLTIWTS 129
L G ++ G+ LD V +S + +Y K G + A V+ R+ ++ +T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
+I G EA ++ ++ ++ + P + Y+S++ G + G ++ M +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQI-LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK- 454
Query: 190 FGIAPTVKHYTCLADLLGRVG 210
G P V Y L D L + G
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQG 475
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 51/279 (18%)
Query: 22 NILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGSLSKGQEIE 81
N++ + S+I G+ + EAL +FR M I+PD AT TV+ + K ++
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK--HMK 552
Query: 82 EYIYLYGLDLDQQVQTS--------LLHMYSKCGSIQKAREVFDRVT----DKDLTIWTS 129
I L DL Q+ + S ++H+ KC I+ A + F+ + + D+ + +
Sbjct: 553 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 612
Query: 130 MINCYAIHGMGNEAINLFHKMTV----------------------------------EER 155
MI Y +EA +F + V E+
Sbjct: 613 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Query: 156 IMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHYTCLADLLGRVGQLDLA 215
P+A+ Y ++ S S +E K F+ M E GI+P++ Y+ + D L + G++D A
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEA 731
Query: 216 VDAIQGMPLDVQAQAWSCLLSACRIHGNVELGELAAAKL 254
+ +D + + A I G ++G L A L
Sbjct: 732 TNIFH-QAIDAKLLP-DVVAYAILIRGYCKVGRLVEAAL 768
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 6/201 (2%)
Query: 14 IFDLTAGKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPDGATLATVLSACADLGS 73
+ D N++++ ++I G+ + G A DLF+ M + I PD +T++ G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 74 LSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFDRV----TDKDLTIWTS 129
L G ++ G+ LD V +S + +Y K G + A V+ R+ ++ +T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 130 MINCYAIHGMGNEAINLFHKMTVEERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHED 189
+I G EA ++ ++ ++ + P + Y+S++ G + G ++ M +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQI-LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK- 454
Query: 190 FGIAPTVKHYTCLADLLGRVG 210
G P V Y L D L + G
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQG 475
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 120/296 (40%), Gaps = 47/296 (15%)
Query: 2 YAKCDNLTSARRIFDLTA----GKNILSWTSMIAGYAQSGHPAEALDLFRRMVRTDIRPD 57
+ + + A ++F L ++ ++T+++ G EAL LF RM + + PD
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 58 GATLATVLSACADLGSLSKGQEIEEYIYLYGLDLDQQVQTSLLHMYSKCGSIQKAREVFD 117
T++ A + G ++ + + + D V ++H+ KC I+ A + F+
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 118 RVT----DKDLTIWTSMINCYAIHGMGNEAINLFHKMTV--------------------- 152
+ + D+ + +MI Y +EA +F + V
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 685
Query: 153 -------------EERIMPDAIVYTSILLACSHSGLVEDGLKFFKSMHEDFGIAPTVKHY 199
E+ P+A+ Y ++ S S +E K F+ M E GI+P++ Y
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSY 744
Query: 200 TCLADLLGRVGQLDLAVDAIQGMPLDVQAQAWSCLLS-ACRIHGNVELGELAAAKL 254
+ + D L + G++D A + + A+ +++ A I G ++G L A L
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQA---IDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797