Miyakogusa Predicted Gene
- Lj2g3v0523460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0523460.1 Non Chatacterized Hit- tr|B9FX69|B9FX69_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,29.19,0.0000000000001,seg,NULL,CUFF.34668.1
(434 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08450.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 155 8e-38
AT5G08450.2 | Symbols: | CONTAINS InterPro DOMAIN/s: Histone de... 155 8e-38
AT5G08450.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Histone de... 155 8e-38
>AT5G08450.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Histone deacetylation protein Rxt3
(InterPro:IPR013951); Has 34444 Blast hits to 20801
proteins in 1175 species: Archae - 64; Bacteria - 2390;
Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses -
208; Other Eukaryotes - 10599 (source: NCBI BLink). |
chr5:2727970-2732572 REVERSE LENGTH=918
Length = 918
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 205/388 (52%), Gaps = 40/388 (10%)
Query: 80 IGTQNKIESSDLKGNRDLQFEN--------------RDTEKKELHGESRGDSHTAKSEKD 125
I + K E KG+RD++FE + +E++GE++ + KS++D
Sbjct: 174 IYGETKREIQGPKGDRDVKFERSVDDFSGKGNTGSYTRNDGREMYGETKREIQGPKSDRD 233
Query: 126 VCVEGQGND---------NNKDIRYDRDN--HNDTKNATKTEKYGSDLLSSPSNRKESKK 174
E G+D +D ++DR+N +N+ K K EK G L+ KE K
Sbjct: 234 AKFERPGDDFSGKSNAGSYTRDTKFDRENQNYNEQKGEIKMEKEGHAHLAW----KEQKD 289
Query: 175 L-KGKRHFDSPSGRLDSGHTSRGNT--PAEVGKKNSTAE-ERDYSEAGEAVEKNKIDSKS 230
+GKR + + +D SRGN P EVG K+ +A E + E E V +NK+D+K+
Sbjct: 290 YHRGKRVAEGSTANVDPWVVSRGNPQGPTEVGPKDLSAPVEGSHLEGRETVGENKVDAKN 349
Query: 231 EDGFK--DRERKDVKHRDWGDKEKEXXXXXXXXXXXXXXXXXKESPNEDRGAXXXXXXXX 288
ED FK D++RK++KHR+WGD++K+ KE E+R +
Sbjct: 350 EDRFKEKDKKRKELKHREWGDRDKDRNDRRVSVLVGSVMSEPKEIGREERESDRWERERM 409
Query: 289 XXXXXXXNSKQREKAHTKRALWNEMEKEVSNNEKELGDG--KTSEQETLLPDQKKQKVAD 346
N K+++K H KR EKE+S NEKELG+ K SEQE + P+QKKQ D
Sbjct: 410 EQKDRERN-KEKDKDHIKREPRTGAEKEISQNEKELGEASAKPSEQEYVAPEQKKQNEPD 468
Query: 347 SSKNVDGEGRESRKERDADIEGDQPDKHIKF-DKKSEDGCADGEETEEKEREVHNYNVQR 405
+ + + E +E R+ERD D E ++ +K + +K+SEDGC +GE E+E++ NY VQ+
Sbjct: 469 NCEKDERETKEKRRERDGDSEAERAEKRSRISEKESEDGCLEGEGATEREKDAFNYGVQQ 528
Query: 406 RKRIQRSRGSPQVANREARFASDAQDNE 433
RKR R RGSPQ NR+ S +QDNE
Sbjct: 529 RKRALRPRGSPQTTNRD-NVRSRSQDNE 555
>AT5G08450.2 | Symbols: | CONTAINS InterPro DOMAIN/s: Histone
deacetylation protein Rxt3 (InterPro:IPR013951); Has
30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr5:2727970-2732572
REVERSE LENGTH=918
Length = 918
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 205/388 (52%), Gaps = 40/388 (10%)
Query: 80 IGTQNKIESSDLKGNRDLQFEN--------------RDTEKKELHGESRGDSHTAKSEKD 125
I + K E KG+RD++FE + +E++GE++ + KS++D
Sbjct: 174 IYGETKREIQGPKGDRDVKFERSVDDFSGKGNTGSYTRNDGREMYGETKREIQGPKSDRD 233
Query: 126 VCVEGQGND---------NNKDIRYDRDN--HNDTKNATKTEKYGSDLLSSPSNRKESKK 174
E G+D +D ++DR+N +N+ K K EK G L+ KE K
Sbjct: 234 AKFERPGDDFSGKSNAGSYTRDTKFDRENQNYNEQKGEIKMEKEGHAHLAW----KEQKD 289
Query: 175 L-KGKRHFDSPSGRLDSGHTSRGNT--PAEVGKKNSTAE-ERDYSEAGEAVEKNKIDSKS 230
+GKR + + +D SRGN P EVG K+ +A E + E E V +NK+D+K+
Sbjct: 290 YHRGKRVAEGSTANVDPWVVSRGNPQGPTEVGPKDLSAPVEGSHLEGRETVGENKVDAKN 349
Query: 231 EDGFK--DRERKDVKHRDWGDKEKEXXXXXXXXXXXXXXXXXKESPNEDRGAXXXXXXXX 288
ED FK D++RK++KHR+WGD++K+ KE E+R +
Sbjct: 350 EDRFKEKDKKRKELKHREWGDRDKDRNDRRVSVLVGSVMSEPKEIGREERESDRWERERM 409
Query: 289 XXXXXXXNSKQREKAHTKRALWNEMEKEVSNNEKELGDG--KTSEQETLLPDQKKQKVAD 346
N K+++K H KR EKE+S NEKELG+ K SEQE + P+QKKQ D
Sbjct: 410 EQKDRERN-KEKDKDHIKREPRTGAEKEISQNEKELGEASAKPSEQEYVAPEQKKQNEPD 468
Query: 347 SSKNVDGEGRESRKERDADIEGDQPDKHIKF-DKKSEDGCADGEETEEKEREVHNYNVQR 405
+ + + E +E R+ERD D E ++ +K + +K+SEDGC +GE E+E++ NY VQ+
Sbjct: 469 NCEKDERETKEKRRERDGDSEAERAEKRSRISEKESEDGCLEGEGATEREKDAFNYGVQQ 528
Query: 406 RKRIQRSRGSPQVANREARFASDAQDNE 433
RKR R RGSPQ NR+ S +QDNE
Sbjct: 529 RKRALRPRGSPQTTNRD-NVRSRSQDNE 555
>AT5G08450.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Histone
deacetylation protein Rxt3 (InterPro:IPR013951); Has
34444 Blast hits to 20801 proteins in 1175 species:
Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi -
3729; Plants - 1886; Viruses - 208; Other Eukaryotes -
10599 (source: NCBI BLink). | chr5:2727970-2732572
REVERSE LENGTH=918
Length = 918
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 205/388 (52%), Gaps = 40/388 (10%)
Query: 80 IGTQNKIESSDLKGNRDLQFEN--------------RDTEKKELHGESRGDSHTAKSEKD 125
I + K E KG+RD++FE + +E++GE++ + KS++D
Sbjct: 174 IYGETKREIQGPKGDRDVKFERSVDDFSGKGNTGSYTRNDGREMYGETKREIQGPKSDRD 233
Query: 126 VCVEGQGND---------NNKDIRYDRDN--HNDTKNATKTEKYGSDLLSSPSNRKESKK 174
E G+D +D ++DR+N +N+ K K EK G L+ KE K
Sbjct: 234 AKFERPGDDFSGKSNAGSYTRDTKFDRENQNYNEQKGEIKMEKEGHAHLAW----KEQKD 289
Query: 175 L-KGKRHFDSPSGRLDSGHTSRGNT--PAEVGKKNSTAE-ERDYSEAGEAVEKNKIDSKS 230
+GKR + + +D SRGN P EVG K+ +A E + E E V +NK+D+K+
Sbjct: 290 YHRGKRVAEGSTANVDPWVVSRGNPQGPTEVGPKDLSAPVEGSHLEGRETVGENKVDAKN 349
Query: 231 EDGFK--DRERKDVKHRDWGDKEKEXXXXXXXXXXXXXXXXXKESPNEDRGAXXXXXXXX 288
ED FK D++RK++KHR+WGD++K+ KE E+R +
Sbjct: 350 EDRFKEKDKKRKELKHREWGDRDKDRNDRRVSVLVGSVMSEPKEIGREERESDRWERERM 409
Query: 289 XXXXXXXNSKQREKAHTKRALWNEMEKEVSNNEKELGDG--KTSEQETLLPDQKKQKVAD 346
N K+++K H KR EKE+S NEKELG+ K SEQE + P+QKKQ D
Sbjct: 410 EQKDRERN-KEKDKDHIKREPRTGAEKEISQNEKELGEASAKPSEQEYVAPEQKKQNEPD 468
Query: 347 SSKNVDGEGRESRKERDADIEGDQPDKHIKF-DKKSEDGCADGEETEEKEREVHNYNVQR 405
+ + + E +E R+ERD D E ++ +K + +K+SEDGC +GE E+E++ NY VQ+
Sbjct: 469 NCEKDERETKEKRRERDGDSEAERAEKRSRISEKESEDGCLEGEGATEREKDAFNYGVQQ 528
Query: 406 RKRIQRSRGSPQVANREARFASDAQDNE 433
RKR R RGSPQ NR+ S +QDNE
Sbjct: 529 RKRALRPRGSPQTTNRD-NVRSRSQDNE 555