Miyakogusa Predicted Gene
- Lj2g3v0523270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0523270.1 Non Chatacterized Hit- tr|I1L1I2|I1L1I2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,31.28,7e-19,seg,NULL; PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide
repe,CUFF.34657.1
(286 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 155 4e-38
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 5e-37
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 149 3e-36
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 3e-35
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 2e-34
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 5e-34
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 7e-34
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 9e-34
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 2e-33
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 9e-33
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 2e-32
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 3e-32
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 7e-32
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 9e-31
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 4e-30
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 3e-29
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 6e-29
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 5e-28
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 5e-28
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 9e-28
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 1e-25
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 3e-24
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 3e-24
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 106 2e-23
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 4e-23
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 6e-23
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 8e-23
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 99 2e-21
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 6e-21
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 96 2e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 7e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 7e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 8e-20
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 93 2e-19
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 92 6e-19
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 7e-19
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 2e-18
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 6e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 7e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 7e-18
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 9e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 9e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 4e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 5e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 5e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 8e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 5e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 81 7e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 8e-16
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 80 1e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 2e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 80 2e-15
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-15
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 8e-15
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 1e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 2e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 4e-14
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 75 7e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 7e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 74 8e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 74 8e-14
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 9e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 74 1e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 73 3e-13
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 72 3e-13
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 7e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 8e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 9e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 9e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 3e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 9e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 3e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 4e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 9e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 3e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 6e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 1e-09
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 60 2e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 59 3e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 58 7e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 57 1e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 56 3e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 6e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 55 7e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 8e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 9e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 54 9e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 54 1e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 54 2e-07
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 53 2e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 52 6e-07
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 50 2e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 49 3e-06
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 49 4e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 48 7e-06
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 48 9e-06
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 117/184 (63%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA++ F +++ P PS+++FS +++ + K ++ + Q+EL GI +I T +I+I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC+C + A+SV+G ++K GY+P+T NTL+KGL L+G V A+ D +V G +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPN----VIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y +++NG+C++GDT AL LLR++E N V YSTIIDSLC+ + A L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 269 YSEM 272
+ EM
Sbjct: 251 FKEM 254
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + ++ +P+II ++ ++ S A ++ M PDIVT + LI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
YC + ++ V NI KRG N + + L++G C G ++ A E ++V+ G
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPN----VIMYSTIIDSLCKVKLVSDAYDL 268
D ++Y L++GLC G AL + ++ ++MY+TII+ +CK V DA++L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 269 YSEM 272
+ +
Sbjct: 496 FCSL 499
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D ++ P++I F+++L +K A L +M +GI P+I+T + L+
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC +L+ A +++ +++ P+ + +L+KG C+ V M+ ++ +G
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y+ L+ G C++G + A L +++ P+V+ Y ++D LC + A ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 269 YSEMVAGEFHL 279
+ ++ + L
Sbjct: 461 FEDLQKSKMDL 471
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + + +++ +P I+ F+ ++ +K + + + +G+ + VT SIL+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C G++ A + ++ G P+ + L+ GLC G +++A+E +D+
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
L V Y T+I G+CK G A L + PNV+ Y+ +I LCK +S+A L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 269 YSEM 272
+M
Sbjct: 531 LRKM 534
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ + + + +S I+ SL + AISL +ME KGI+ +VT + L+
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G+ ++ +++ R PN I N L+ +G +Q A E + +++ +G
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 214 DEVSYATLINGLCKTGDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ ++Y TL++G C A +L R P+++ ++++I C VK V D ++
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S F + S++ ++ ++ L K ++ L M + I P+++T ++L++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ G+L A + ++ RG PN I NTLM G C++ + A D +V
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V++ +LI G C +++ R I N + YS ++ C+ + A +L+
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 270 SEMVA 274
EMV+
Sbjct: 427 QEMVS 431
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV +R+++ P ++ ++ I+ + + S A+ L +ME + ++ D+ T S +I
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G + +A S+ + +G + + + N+L++GLC G D+V++
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ +++ L++ K G + A L +++ G PN+I Y+T++D C +S+A ++
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 269 YSEMV 273
MV
Sbjct: 356 LDLMV 360
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D + F + + + + +S+++ + A L +M G+ PD++T IL+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+L A + ++ K ++ T+++G+C G V+ A + +G +
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTII 253
+ ++Y +I+GLCK G A LLR++E PN Y+T+I
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 68/149 (45%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ P ++ + ++L L A+ + ++ + IV + +I
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G++ A+++ ++ +G +PN + ++ GLC KG + A + G
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE 242
++ +Y TLI + GD A+ +L+ +++
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 64/132 (48%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F L + I+ ++ I+ + K A +L + KG++P+++T +++I+
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G L+ A ++ + + G PN NTL++ G + + + +++ + GF
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576
Query: 214 DEVSYATLINGL 225
D S +I+ L
Sbjct: 577 DASSIKMVIDML 588
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV F ++Q P P++I+F+ + +++ K K Y ++L QME KGI I T SI+I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEF--------H- 203
NC+C +L+ AFS MG I+K GY+P+T+I NTL+ GLCL+ V A+E H
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 204 --------------------------DDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
D +V GF+ +EV+Y ++N +CK+G T A+ L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 238 LRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLYSEM 272
LR++E N+ + YS IID LCK + +A++L++EM
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A ++Q P+ I ++ ++ K AI + M KG PDI+T +ILI
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N YC ++ + + RG NT+ NTL++G C G ++ A + ++V++ R
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDL 268
D VSY L++GLC G+ AL + +IE ++ +Y II +C V DA+DL
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 269 Y 269
+
Sbjct: 531 F 531
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + FN + II ++ ++ + L M + I P++VT S+LI
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + G+L A ++ +++RG PNTI N+L+ G C + ++ A++ D ++++G
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
D +++ LING CK L L R+ + G N + Y+T++ C+ + A L
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 269 YSEMVA 274
+ EMV+
Sbjct: 461 FQEMVS 466
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 99/183 (54%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ + + +++S+I+ L K A +L ++ME+KG + DI+T + LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C+ G+ ++ +++KR PN + + L+ +G ++ A + +++ +G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ ++Y +LI+G CK A++++ + +G P+++ ++ +I+ CK + D +L+
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 270 SEM 272
EM
Sbjct: 427 REM 429
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D +++ +P+++ FS+++ S +K A L +M +GI P+ +T + LI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C +L A ++ ++ +G P+ + N L+ G C + +E ++ +G
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y TL+ G C++G A +L +++ P+++ Y ++D LC + A ++
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 269 YSEMVAGEFHLMLSLIM 285
+ ++ + L + + M
Sbjct: 496 FGKIEKSKMELDIGIYM 512
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ +R+++M P++I + ++ L S A+ L +M G +P+ VT ++
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C GQ A ++ + +R + + + + ++ GLC G + A +++ +GF+
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDL 268
D ++Y TLI G C G +LLR + PNV+ +S +IDS K + +A L
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 269 YSEMV 273
EM+
Sbjct: 356 LKEMM 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 4/189 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D + F + + + ++ ++ + A L +M + +RPDIV+ IL+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+L A + G I K + + I ++ G+C V A + + +G +
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
LD +Y +I+ LC+ A L R++ EG P+ + Y+ +I + + A +L
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Query: 269 YSEMVAGEF 277
EM + F
Sbjct: 601 IEEMKSSGF 609
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 121/219 (55%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F ++ P P++I+FS + +++ K K Y ++L QMELKGI ++ T SI+I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC+C +L AFS MG I+K GY+PNTI +TL+ GLCL+G V A+E D +V G +
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 213 LDEVSYATLINGL-----------------------------------CKTGDTRAALRL 237
D ++ TL+NGL CK+G T A+ L
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 238 LRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLYSEM 272
LR++E N+ + YS IID LCK + +A++L++EM
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 99/183 (54%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ + + +++S+I+ L K A +L ++ME+KGI +I+T +ILI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C+ G+ ++ +++KR PN + + L+ +G ++ A E H +++ +G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D ++Y +LI+G CK A +++ + +G PN+ ++ +I+ CK + D +L+
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 270 SEM 272
+M
Sbjct: 427 RKM 429
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
P I ++ ++ K H A + M KG P+I T +ILIN YC ++
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ + RG +T+ NTL++G C G + A E ++V++ + V+Y L++GLC
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Query: 227 KTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G++ AL + +IE ++ +Y+ II +C V DA+DL+ +
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 7/201 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D +++ P+++ FS+++ S +K A L +M +GI PD +T + LI
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C L A ++ ++ +G PN N L+ G C + +E + +G
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y TLI G C+ G A L +++ PN++ Y ++D LC A ++
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 269 YSEMVAGEFHL---MLSLIMH 286
+ ++ + L + ++I+H
Sbjct: 496 FEKIEKSKMELDIGIYNIIIH 516
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + FN + T +II +++++ + L M + I P++VT S+LI
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + G+L A + ++ RG P+TI +L+ G C + + +A + D +V++G
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++ LING CK L L R+ + G + + Y+T+I C++ ++ A +L
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 269 YSEMVA 274
+ EMV+
Sbjct: 461 FQEMVS 466
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+I F++++ K + L +M L+G+ D VT + LI +C LG+L A +
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
++ R PN + L+ GLC G ++A+E + + LD Y +I+G+C
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 228 TGDTRAALRL-----LRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
A L L+ ++ P V Y+ +I LCK +S+A L+ +M
Sbjct: 521 ASKVDDAWDLFCSLPLKGVK-PGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 91/185 (49%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ +R+++M P +I + ++ L + A+ L +M G +P+ VT ++
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C GQ A ++ + +R + + + + ++ GLC G + A +++ +G
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++Y LI G C G +LLR + PNV+ +S +IDS K + +A +L
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 269 YSEMV 273
+ EM+
Sbjct: 356 HKEMI 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 67/149 (44%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ P+I+ + ++L L A+ + ++E + DI +I+I+
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C+ ++ A+ + ++ +G +P N ++ GLC KG + A + G
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE 242
D +Y LI GD +++L+ +++
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELK 605
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 117/219 (53%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV+ F +++ P PSIIEFS +L+++ KM + ISL QM+ GI + T SILI
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 153 NCYCHLGQLTSAFSVMGNILK-----------------------------------RGYQ 177
NC+C QL A +V+G ++K GYQ
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 178 PNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
PNT+ NTL+ GL L AM D +VA+G + D V+Y ++NGLCK GDT A L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 238 LRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L ++E P V++Y+TIID LCK K + DA +L+ EM
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 100/183 (54%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + N++ Q P ++ ++ I+ L K KH A++L +ME KGIRP++VT S LI+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C+ G+ + A ++ ++++R P+ + L+ +G + A + +D++V +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
V+Y++LING C A ++ + P+V+ Y+T+I CK K V + +++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 270 SEM 272
EM
Sbjct: 420 REM 422
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV+ +++ P+ + F+ ++ L S A++L +M KG +PD+VT +++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G AF+++ + + +P +I NT++ GLC + A+ ++ +G R
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
+ V+Y++LI+ LC G A RLL R+I P+V +S +ID+ K + +A
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEK 347
Query: 268 LYSEMV 273
LY EMV
Sbjct: 348 LYDEMV 353
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + +++ P + FS ++ + +K A L +M + I P IVT S LI
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C +L A + ++ + P+ + NTL+KG C V+ ME ++ +G
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCK 258
+ V+Y LI GL + GD A + +++ +G PN++ Y+T++D LCK
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A ++ +++ PSI+ +S ++ A + M K PD+VT + LI
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C ++ V + +RG NT+ N L++GL G A E ++V+ G
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++Y TL++GLCK G A+ + ++ P + Y+ +I+ +CK V D +DL
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 269 YSEM 272
+ +
Sbjct: 524 FCNL 527
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ + F + Q + + +++++ L + A + +M G+ P+I+T + L+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+L A V + + +P N +++G+C G V+ + ++ +G +
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTII 253
D V+Y T+I+G C+ G A L ++++ PN Y+T+I
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 69/148 (46%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ P+I+ ++ +L L K A+ + ++ + P I T +I+I
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G++ + + N+ +G +P+ + NT++ G C KG + A ++ G
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI 241
+ Y TLI + GD A+ L++++
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEM 597
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 115/185 (62%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F+ +++ P PSI++F+ +L++++K+K Y ISL +ME+ GIR D+ T +I+I
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC+C Q++ A S++G +LK GY+P+ + + +L+ G C + V A+ D +V G++
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y +I+ LCKT A ++IE PNV+ Y+ +++ LC SDA L
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 269 YSEMV 273
S+M+
Sbjct: 248 LSDMI 252
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 101/184 (54%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAVS ++++++ P I+ ++ I+ SL K K + A ++E KGIRP++VT + L+
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C+ + + A ++ +++K+ PN I + L+ G V A E +++V
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y++LINGLC A ++ + +G +V+ Y+T+I+ CK K V D L
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 269 YSEM 272
+ EM
Sbjct: 353 FREM 356
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F +++M P I+ +S ++ L A + M KG D+V+ + LI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C ++ + + +RG NT+ NTL++G G V +A EF + G
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y L+ GLC G+ AL + ++ +++ Y+T+I +CK V +A+ L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 269 YSEM 272
+ +
Sbjct: 458 FCSL 461
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S ++L++ P + ++ + S A+SL +M G +PDIV + +I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C ++ AF I ++G +PN + L+ GLC A D++ +
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ ++Y+ L++ K G A L ++ P+++ YS++I+ LC + +A ++
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 270 SEMVA 274
MV+
Sbjct: 319 DLMVS 323
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + +++ TP++I +S +L + +K A L +M I PDIVT S LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C ++ A + ++ +G + + NTL+ G C V+ M+ ++ +G
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y TLI G + GD A Q++ P++ Y+ ++ LC + A +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 269 YSEMVAGEFHL 279
+ +M E L
Sbjct: 423 FEDMQKREMDL 433
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+ ++ ++ ++ ++ K K + L +M +G+ + VT + LI
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G + A + G P+ N L+ GLC G +++A+ +D+ +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
LD V+Y T+I G+CKTG A L + P+++ Y+T++ LC L+ + L
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 269 YSEM 272
Y++M
Sbjct: 493 YTKM 496
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 59/118 (50%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A FF+++ +P I ++++L L A+ + M+ + + DIVT + +I
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
C G++ A+S+ ++ +G +P+ + T+M GLC KG++ + + +G
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 123/219 (56%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV+ F +++ P PSI+EFS +L+++ KM + ISL QM+ GI ++ T SILI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLC-----------LKGMVQ---- 197
NC+C QL+ A +V+ ++K GY+P+ + LN+L+ G C + MV+
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 198 --------------------RAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
A+ D +V +G + D V+Y ++NGLCK GD AL L
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 238 LRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L+++E P V++Y+TIID+LC K V+DA +L++EM
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S ++ Q P ++ ++ I+ +L K+ + A++L +M+ KGIRP++VT + LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C+ G+ + A ++ ++++R PN + + L+ +G + A + +D+++ +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 214 DEVSYATLINGLC---KTGDTRAALRLLRQIEG-PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y++LING C + + + L+ + PNV+ Y+T+I CK K V + +L+
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 270 SEM 272
EM
Sbjct: 420 REM 422
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAVS ++++M P F+ ++ L + S A++L +M +KG +PD+VT I++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G + A S++ + + +P +I NT++ LC V A+ ++ +G R
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
+ V+Y +LI LC G A RLL R+I PNV+ +S +ID+ K + +A
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEK 347
Query: 268 LYSEMV 273
LY EM+
Sbjct: 348 LYDEMI 353
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + +++ P+++ FS ++ + +K A L +M + I PDI T S LI
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C +L A + ++ + PN + NTL+KG C V ME ++ +G
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 213 LDEVSYATLI-----------------------------------NGLCKTGDTRAALRL 237
+ V+Y TLI +GLC G AL +
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 238 LRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
++ P++ Y+ +I+ +CK V D +DL+ +
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 72/144 (50%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F +++ P I+ +S++L L TA+ + ++ + PDI T +I+I C
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G++ + + ++ +G +PN + T+M G C KG+ + A ++ +G D +
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 218 YATLINGLCKTGDTRAALRLLRQI 241
Y TLI + GD A+ L+R++
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREM 597
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ + F + Q + + ++ ++ + + A + QM G+ PDI+T SIL+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C+ G++ +A V + + +P+ N +++G+C G V+ + + +G +
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y T+++G C+ G A L R++ EG P+ Y+T+I + + + + +L
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 269 YSEMVAGEF 277
EM + F
Sbjct: 594 IREMRSCRF 602
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F ++ P+++ ++ ++ K K + L +M +G+ + VT + LI
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + + +A V ++ G P+ + + L+ GLC G V+ A+ + +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y +I G+CK G L + PNV+ Y+T++ C+ L +A L
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 269 YSEM 272
+ EM
Sbjct: 559 FREM 562
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 115/219 (52%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F ++Q P P+ I+F+ + +++ + K Y + MEL GI D+ T +I+I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTI------------------------------- 181
NCYC +L AFSV+G K GY+P+TI
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 182 ----ILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
++TL+ GLCLKG V A+ D +V GF+ DEV+Y ++N LCK+G++ AL L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 238 LRQIEGPN----VIMYSTIIDSLCKVKLVSDAYDLYSEM 272
R++E N V+ YS +IDSLCK DA L++EM
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 39/220 (17%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIR----------- 142
A+ F ++ + + S++++S+++ SL K + A+SL ++ME+KGI+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 143 ------------------------PDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQP 178
PD+VT S LI+ + G+L A + ++ RG P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 179 NTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL 238
+TI N+L+ G C + + A + D +V++G D V+Y+ LIN CK +RL
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 239 RQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
R+I PN I Y+T++ C+ ++ A +L+ EMV+
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A +N ++ P I ++ ++ K A + M KG PDIVT SILI
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N YC ++ + I +G PNTI NTL+ G C G + A E ++V++G
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIM----YSTIIDSLCKVKLVSDAYDL 268
V+Y L++GLC G+ AL + +++ + + Y+ II +C V DA+ L
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 269 Y 269
+
Sbjct: 513 F 513
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV+ +R+++M P ++ S ++ L S A+ L +M G +PD VT ++
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G A + + +R + + + + ++ LC G A+ +++ +G +
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y++LI GLC G ++LR++ G P+V+ +S +ID K + +A +L
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 269 YSEMV 273
Y+EM+
Sbjct: 338 YNEMI 342
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+ ++ P I+ +S+++ S K K + L ++ KG+ P+ +T + L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C G+L +A + ++ RG P+ + L+ GLC G + +A+E + +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
L Y +I+G+C A L + P+V+ Y+ +I LCK +S+A L
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 269 YSEM 272
+ +M
Sbjct: 548 FRKM 551
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 119/219 (54%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV F ++Q P PSI+EF+ +L+++ KM + ISL +M+ I D+ + +ILI
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 153 NCYCHLGQLTSAFSVMGNILKRG-----------------------------------YQ 177
NC+C QL A +V+G ++K G YQ
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 178 PNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
PNT+ NTL+ GL L A+ D +VA+G + D +Y T++NGLCK GD AL L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 238 LRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L+++E +V++Y+TIID+LC K V+DA +L++EM
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 102/183 (55%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S ++ + ++ ++ I+ +L K+ + A++L +M+ KGIRP++VT + LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C+ G+ + A ++ ++++R PN + + L+ +G + A + +D+++ +
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 214 DEVSYATLINGLC---KTGDTRAALRLLRQIEG-PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y++LING C + + + L+ + PNV+ Y+T+I CK K V + +L+
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 270 SEM 272
EM
Sbjct: 419 REM 421
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 4/170 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + +++ P+++ FS ++ + +K A L +M + I PDI T S LI
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C +L A + ++ + PN + NTL+KG C V+ ME ++ +G
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCK 258
+ V+Y TLI GL + GD A ++ +++ +G P++I YS ++D LCK
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 6/186 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV+ +++ M P+ + F+ ++ L S A++L +M +G +PD+ T ++
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G + A S++ + K + + +I T++ LC V A+ ++ +G R
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
+ V+Y +LI LC G A RLL R+I PNV+ +S +ID+ K + +A
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 268 LYSEMV 273
LY EM+
Sbjct: 347 LYDEMI 352
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV+ +R++ P + + ++ L K A+SL +ME I D+V + +I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C+ + A ++ + +G +PN + N+L++ LC G A D++ +
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
+ V+++ LI+ K G A +L R I+ P++ YS++I+ C + +A
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKH 381
Query: 268 LYSEMVAGE 276
++ M++ +
Sbjct: 382 MFELMISKD 390
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F ++ P+++ ++ ++ K K + L +M +G+ + VT + LI
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
G A + ++ G P+ I + L+ GLC G +++A+ + +
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y +I G+CK G L + PNVI+Y+T+I C+ L +A L
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 269 YSEM 272
+ EM
Sbjct: 558 FREM 561
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F +++ P II +S++L L K A+ + ++ + PDI T +I+I
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G++ + + ++ +G +PN II T++ G C KG+ + A ++ G
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI 241
+ +Y TLI + GD A+ L++++
Sbjct: 569 NSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ + F + Q + + ++ ++ L + A + +M G+ PDI+T SIL+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+L A V + K +P+ N +++G+C G V+ + + +G +
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTII 253
+ + Y T+I+G C+ G A L R+++ PN Y+T+I
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 117/219 (53%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV F +++ P PSI+EF+ +L+++ KM + ISL QM+ GI D+ T SI I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC+C QL+ A +V+ ++K GY+P+ + L++L+ G C + A+ D +V G++
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 213 LDE-----------------------------------VSYATLINGLCKTGDTRAALRL 237
D V+Y T++NGLCK GD AL L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 238 LRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L ++E NV++++TIIDSLCK + V A DL++EM
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ N++ +++ F+ I+ SL K +H A+ L +ME KGIRP++VT + LIN
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C+ G+ + A ++ N+L++ PN + N L+ +G + A + H++++ +
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D ++Y LING C A ++ + + PN+ Y+T+I+ CK K V D +L+
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 270 SEM 272
EM
Sbjct: 422 REM 424
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 97/185 (52%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV+ +++++M P F+ ++ L S A++L QM +G +PD+VT ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G + A +++ + + N +I NT++ LC V+ A++ ++ +G R
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y +LIN LC G A RLL + PNV+ ++ +ID+ K + +A L
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 269 YSEMV 273
+ EM+
Sbjct: 351 HEEMI 355
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + +L+ P+++ F+ ++ + K A L +M + I PD +T ++LI
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C +L A + ++ + PN NTL+ G C V+ +E ++ +G
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGP---------------------------- 244
+ V+Y T+I G + GD +A + +Q+
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 245 -----------NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
N+ +Y+T+I+ +CK V +A+DL+ +
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 1/181 (0%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F ++ P+I ++ ++ K K + L +M +G+ + VT + +I
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G SA V ++ + + + L+ GLC G + A+ +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE-GPNVIMYSTIIDSLCKVKLVSDAYDLYSE 271
L+ Y T+I G+CK G A L + P+V+ Y+T+I LC +L+ +A DL+ +
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRK 560
Query: 272 M 272
M
Sbjct: 561 M 561
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D V F + Q + + ++ I+ + +A + QM + DI+T SIL+
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+L +A + + K + N I NT+++G+C G V A + + +
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL---FCSLSIK 532
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTII 253
D V+Y T+I+GLC + A L R+++ PN Y+T+I
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 118/219 (53%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV F +++ P PSI+EF+ +L+++ KM + ISL QM+ GI D+ T SI I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC+C QL+ A +V+ ++K GY+P+ + L++L+ G C + A+ D +V G++
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 213 LDE-----------------------------------VSYATLINGLCKTGDTRAALRL 237
D V+Y T++NGLCK GD AL L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 238 LRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L+++E +V++Y+TIID LCK K + DA +L++EM
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S ++ + ++ ++ I+ L K KH A++L +M+ KGIRPD+ T S LI+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C+ G+ + A ++ ++++R PN + + L+ +G + A + +D+++ +
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 214 DEVSYATLINGLC---KTGDTRAALRLLRQIEG-PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y++LING C + + + L+ + PNV+ YST+I CK K V + +L+
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 270 SEM 272
EM
Sbjct: 422 REM 424
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV+ +++++M P F+ ++ L S A++L QM +G +PD+VT ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G + A S++ + K + + +I NT++ GLC + A+ ++ +G R
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
D +Y++LI+ LC G A RLL R+I PNV+ +S +ID+ K + +A
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEK 349
Query: 268 LYSEMV 273
LY EM+
Sbjct: 350 LYDEMI 355
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + +++ P+++ FS ++ + +K A L +M + I PDI T S LI
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C +L A + ++ + PN + +TL+KG C V+ ME ++ +G
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCK 258
+ V+Y TLI+G + D A + +Q+ PN++ Y+ ++D LCK
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F ++ P+++ +S ++ K K + L +M +G+ + VT + LI
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + +A V ++ G PN + N L+ GLC G + +AM + +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y +I G+CK G L + PNVI Y+T+I C+ +A L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 269 YSEM 272
+M
Sbjct: 561 LKKM 564
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 72/144 (50%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F +++ + P+I+ ++++L L K + A+ + ++ + PDI T +I+I C
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G++ + + N+ +G PN I NT++ G C KG + A + G + +
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 218 YATLINGLCKTGDTRAALRLLRQI 241
Y TLI + GD A+ L++++
Sbjct: 576 YNTLIRARLRDGDREASAELIKEM 599
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ + F + Q + + ++ ++ + + A + QM G+ P+I+T +IL+
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+L A V + + +P+ N +++G+C G V+ E ++ +G
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTII 253
+ ++Y T+I+G C+ G A LL++++ PN Y+T+I
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 118/219 (53%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV F + + P P +I+FS + + + + K Y + L QMELKGI ++ T SI+I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEF--------H- 203
NC C +L+ AFS MG I+K GY+P+T+ +TL+ GLCL+G V A+E H
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 204 --------------------------DDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
D +V GF+ +EV+Y ++ +CK+G T A+ L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 238 LRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLYSEM 272
LR++E + + YS IID LCK + +A++L++EM
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 95/183 (51%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ + +++S+I+ L K A +L ++ME+KG + DI+ + LI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C+ G+ ++ +++KR P+ + + L+ +G ++ A E H +++ +G
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V+Y +LI+G CK A +L + GPN+ ++ +I+ CK L+ D +L+
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 270 SEM 272
+M
Sbjct: 411 RKM 413
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A ++Q +P + ++ ++ K A + M KG P+I T +ILI
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N YC + + + RG +T+ NTL++G C G ++ A E ++V++ R
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDL 268
D VSY L++GLC G+ AL + +IE ++ +Y+ II +C V DA+DL
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 269 YSEM 272
+ +
Sbjct: 515 FCSL 518
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 7/201 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D +++ TP ++ FS ++ +K A L +M +GI PD VT + LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C QL A ++ ++ +G PN N L+ G C ++ +E + +G
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y TLI G C+ G A L +++ P+++ Y ++D LC A ++
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 269 YSEMVAGEFHL---MLSLIMH 286
+ ++ + L + ++I+H
Sbjct: 480 FEKIEKSKMELDIGIYNIIIH 500
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ +R+++M P++I + ++ L S A+ L +M G +P+ VT ++
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL 219
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C GQ A ++ + +R + + + + ++ GLC G + A +++ +GF+
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D + Y TLI G C G +LLR + P+V+ +S +ID K + +A +L
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 269 YSEMV 273
+ EM+
Sbjct: 340 HKEMI 344
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + FN + II ++ ++ + L M + I PD+V S LI
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C+ G+L A + +++RG P+T+ +L+ G C + + +A D +V++G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++ LING CK L L R+ + G + + Y+T+I C++ + A +L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 269 YSEMVA 274
+ EMV+
Sbjct: 445 FQEMVS 450
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D + F ++ + ++ ++ ++ A L +M + +RPDIV+ IL+
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+ A + I K + + I N ++ G+C V A + + +G +
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTII 253
D +Y +I GLCK G A L R++E PN Y+ +I
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 66/149 (44%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ P I+ + ++L L A+ + ++E + DI +I+I+
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C+ ++ A+ + ++ +G +P+ N ++ GLC KG + A + G
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE 242
+ +Y LI GD + +L+ +I+
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIK 589
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 119/219 (54%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV F +++ P PSI+EFS +L+++ KMK + IS +ME+ G+ ++ T +I+I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC C QL+ A +++G ++K GY P+ + LN+L+ G C + A+ D +V G++
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 213 LDEVSYATL-----------------------------------INGLCKTGDTRAALRL 237
D V++ TL INGLCK G+ AL L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 238 LRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L ++E +V++YST+IDSLCK + V DA +L++EM
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 104/183 (56%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ N++ + ++ +S ++ SL K +H A++L +M+ KGIRPD+ T S LI+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C+ G+ + A ++ ++L+R PN + N+L+ +G + A + D+++ +
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 214 DEVSYATLINGLC---KTGDTRAALRLLRQIEG-PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ V+Y +LING C + + + L+ + P+V+ Y+T+I+ CK K V D +L+
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 270 SEM 272
+M
Sbjct: 404 RDM 406
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 102/186 (54%), Gaps = 6/186 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV+ +++++M P + F+ ++ L + S A++L +M +KG +PD+VT +I
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G+ A +++ + K + + +I +T++ LC V A+ ++ +G R
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
D +Y++LI+ LC G A RLL R+I PNV+ ++++ID+ K + +A
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN-PNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 268 LYSEMV 273
L+ EM+
Sbjct: 332 LFDEMI 337
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+ ++Q P+I+ ++ ++ A + M K PD+VT + LI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C ++ + ++ +RG NT+ TL+ G A +V+ G
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++Y TL++GLCK G A+ + ++ P++ Y+ + + +CK V D +DL
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 269 YSEM 272
+ +
Sbjct: 508 FCSL 511
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F ++ P ++ ++ ++ K K + L M +G+ + VT + LI
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + +A V ++ G PN + NTL+ GLC G +++AM + +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y + G+CK G L + P+VI Y+T+I CK L +AY L
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 269 YSEM 272
+ +M
Sbjct: 543 FIKM 546
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 70/144 (48%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F +++ P+I+ ++ +L L K A+ + ++ + PDI T +I+ C
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G++ + + ++ +G +P+ I NT++ G C KG+ + A + G D +
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 218 YATLINGLCKTGDTRAALRLLRQI 241
Y TLI + GD A+ L++++
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEM 581
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D + F + + + + ++ ++ + A + QM G+ P+I+T + L+
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+L A V + K +P+ N + +G+C G V+ + + +G +
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D ++Y T+I+G CK G A L +++ P+ Y+T+I + + + + +L
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 269 YSEMVAGEF 277
EM + F
Sbjct: 578 IKEMRSCRF 586
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 119/219 (54%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F + Q P PSIIEFS +L+++ KM + IS +ME+ GI ++ T +ILI
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC+C +L+ A +++G ++K GY+P+ + LN+L+ G C + A+ D +V G++
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 213 LDEVSYATLI-----------------------------------NGLCKTGDTRAALRL 237
D V++ TLI NGLCK GDT AL L
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 238 LRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L ++E NV++YST+IDSLCK + DA +L++EM
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 108/183 (59%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ N++ +++ +S ++ SL K +H A++L +ME KG+RP+++T S LI+
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C+ G+ + A ++ ++++R PN + + L+ KG + +A + +++++ +
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 214 DEVSYATLINGLC---KTGDTRAALRLL-RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ +Y++LING C + G+ + L L+ R+ PNV+ Y+T+I+ CK K V +L+
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 270 SEM 272
EM
Sbjct: 417 REM 419
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 6/186 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV+ +++++M P + F+ ++ L S A++L +M +G +PD+VT ++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G A +++ + + N +I +T++ LC A+ ++ +G R
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
+ ++Y++LI+ LC G A RLL R+I PN++ +S +ID+ K + A
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN-PNLVTFSALIDAFVKKGKLVKAEK 344
Query: 268 LYSEMV 273
LY EM+
Sbjct: 345 LYEEMI 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 39/205 (19%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + +++ P+++ FS ++ + +K A L +M + I P+I T S LI
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C L +L A ++ ++++ PN + NTL+ G C V + ME ++ +G
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 213 LDEVSYATLI-----------------------------------NGLCKTGDTRAAL-- 235
+ V+Y TLI +GLCK G A+
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Query: 236 --RLLRQIEGPNVIMYSTIIDSLCK 258
L R P++ Y+ +I+ +CK
Sbjct: 486 FEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+++ ++ ++ K K + L +M +G+ + VT + LI+ + +A V
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
++ G PN + N L+ GLC G + +AM + + D +Y +I G+CK
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 228 TGDTR 232
G +
Sbjct: 511 AGKWK 515
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F +++ P PSI EF+ +L+++ KMK + ISL +M+ GI ++ T +ILI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC+C Q++ A +++G ++K GY+P+ + L++L+ G C + A+ D +V G+R
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 213 LDEVSYATLI-----------------------------------NGLCKTGDTRAALRL 237
D +++ TLI NGLCK GD A L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 238 LRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L ++E NV++YST+IDSLCK + DA +L++EM
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + N++ +++ +S ++ SL K +H A++L +ME KG+RP+++T S LI+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C+ + + A ++ ++++R PN + N L+ +G + A + +D+++ +
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 214 DEVSYATLINGLC---KTGDTRAALRLLRQIEG-PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y++LING C + + + L+ + PNV+ Y+T+I+ CK K + + +L+
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 270 SEM 272
EM
Sbjct: 424 REM 426
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV+ +++++M P I F+ ++ L S A++L +M +G +P++VT +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G + AF+++ + + N +I +T++ LC A+ ++ +G R
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
+ ++Y++LI+ LC A RLL R+I PNV+ ++ +ID+ K + +A
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKIN-PNVVTFNALIDAFVKEGKLVEAEK 351
Query: 268 LYSEMV 273
LY EM+
Sbjct: 352 LYDEMI 357
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + +++ P+++ F+ ++ + +K A L +M + I PDI T S LI
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C +L A + ++ + PN + NTL+ G C + +E ++ +G
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCK 258
+ V+Y TLI+G + D A + +Q+ +G PN++ Y+T++D LCK
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F ++ P+++ ++ ++ K K + L +M +G+ + VT + LI
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + +A V ++ G PN + NTL+ GLC G +++AM + +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+Y +I G+CK G L + P+VI+Y+T+I C+ L +A L
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 269 YSEM 272
+ +M
Sbjct: 563 FRKM 566
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ V F + Q + + ++ ++ + + A + QM G+ P+I+T + L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+L A V + + +P N +++G+C G V+ + + +G +
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EGP 244
D + Y T+I+G C+ G A L R++ +GP
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 117/219 (53%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F +++ P PSI+EFS +L+++ KM + ISL QM+ GI ++ T SI I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C QL+ A +++G ++K GY P+ + LN+L+ G C + A+ D +V G++
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 213 LDEVSYATL-----------------------------------INGLCKTGDTRAALRL 237
D V++ TL INGLCK G+ AL L
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 238 LRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L ++E +V++Y+TIID LCK K + DA+DL+++M
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ N++ + ++ ++ I+ L K KH A L ++ME KGI+PD+ T + LI+
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C+ G+ + A ++ ++L++ P+ + N L+ +G + A + +D++V
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 214 -DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y TLI G CK + + R++ N + Y+T+I + + +A +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 269 YSEMVAGEFH 278
+ +MV+ H
Sbjct: 414 FKQMVSDGVH 423
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV+ +++++M P + F+ ++ L + S A++L +M +KG +PD+VT +I
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G+ A +++ + K + + +I NT++ GLC + A + + + +G +
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y LI+ LC G A RLL + P+++ ++ +ID+ K + +A L
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 269 YSEMV 273
Y EMV
Sbjct: 343 YDEMV 347
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 40/217 (18%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA FN++ P + ++ +++ L +S A L M K I PD+V + LI
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQ-PNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
+ + G+L A + ++K + P+ + NTL+KG C V+ ME ++ +G
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 212 RLDEVSYATLI-----------------------------------NGLCKTGDTRAALR 236
+ V+Y TLI +GLC G+ AL
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 237 LLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDLY 269
+ ++ +++ Y+T+I++LCK V D +DL+
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 6/173 (3%)
Query: 105 HPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSA 164
H P ++ ++ ++ K K + + +M +G+ + VT + LI+ + +A
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 165 FSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLING 224
V ++ G P+ + N L+ GLC G V+ A+ + + + +LD V+Y T+I
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
Query: 225 LCKTGDTRAALRL-----LRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
LCK G L L+ ++ PNV+ Y+T++ C+ L +A L+ EM
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVK-PNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 73/144 (50%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F +++ P I+ ++++L L + TA+ + M+ + ++ DIVT + +I C
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G++ + + ++ +G +PN + T+M G C KG+ + A ++ G + +
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 218 YATLINGLCKTGDTRAALRLLRQI 241
Y TLI + GD A+ L++++
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEM 557
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ + F + Q + + ++ ++ + + A + QM G+ PDI+T +IL+
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C+ G + +A V + KR + + + T+++ LC G V+ + + +G +
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTII 253
+ V+Y T+++G C+ G A L +++ PN Y+T+I
Sbjct: 494 PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 119/219 (54%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F +++ P PSI+EF+ +L+++ KMK + ISL +M+ I + T +ILI
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC+C Q++ A +++G ++K GY+P+ + L++L+ G C + A+ D +V G+R
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 213 LDEVSYATLI-----------------------------------NGLCKTGDTRAALRL 237
D +++ TLI NGLCK GDT AL L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 238 LRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L ++E +V++++TIIDSLCK + V DA +L+ EM
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 98/183 (53%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ N++ ++ F+ I+ SL K +H A++L +ME KGIRP++VT S LI+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C G+ + A ++ +++++ PN + N L+ +G A + +DD++ +
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y +L+NG C A ++ + P+V+ Y+T+I CK K V D +L+
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 270 SEM 272
EM
Sbjct: 424 REM 426
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ +++++ PSI+ S +L K S A++L QM G RPD +T + LI+
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ + A +++ +++RG QPN + ++ GLC +G A+ + + A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V + T+I+ LCK AL L +++E PNV+ YS++I LC SDA L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 270 SEMV 273
S+M+
Sbjct: 319 SDMI 322
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + +++ P+++ F+ ++ + +K + A L M + I PDI T + L+
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C +L A + ++ + P+ + NTL+KG C V+ E ++ +G
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y TLI GL GD A ++ +Q+ +G P+++ YS ++D LC + A ++
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 269 YSEMVAGEFHL 279
+ M E L
Sbjct: 493 FDYMQKSEIKL 503
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 6/184 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ P ++ ++ ++ K K L +M +G+ D VT + LI
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
H G +A V ++ G P+ + + L+ GLC G +++A+E D + +L
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 214 DEVSYATLINGLCKTGDTRAALRL-----LRQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
D Y T+I G+CK G L L+ ++ PNV+ Y+T+I LC +L+ +AY L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK-PNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 269 YSEM 272
+M
Sbjct: 563 LKKM 566
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV+ +++++M P I F+ ++ L S A++L +M +G +P++VT +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G A +++ + + + +I NT++ LC V A+ ++ +G R
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ-IE---GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y++LI+ LC G A +LL IE PN++ ++ +ID+ K +A L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 269 YSEMV 273
Y +M+
Sbjct: 353 YDDMI 357
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D F + + ++ ++ L A + QM G+ PDI+T SIL+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C+ G+L A V + K + + I T+++G+C G V + + +G +
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTII 253
+ V+Y T+I+GLC + A LL++++ PN Y+T+I
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F +++ P I+ +S++L L A+ + M+ I+ DI + +I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G++ + + ++ +G +PN + NT++ GLC K ++Q A + G
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI 241
+ +Y TLI + GD A+ L+R++
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREM 601
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 4/190 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D++ F ++Q P PSI +FS +L+++ KMK Y I L QM++ GI ++ T +IL+
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC+C QL+ A S +G ++K G++P+ + +L+ G C V A+ D +V G++
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V Y T+I+GLCK+ AL LL ++E GP+V+ Y+++I LC SDA +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 269 YSEMVAGEFH 278
S M E +
Sbjct: 244 VSCMTKREIY 253
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F++++ M P+++ ++ I+ L K K A+ L ++ME GI PD+VT + LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+ + A ++ + KR P+ N L+ +G V A EF+++++ +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y+ LI GLC A + + +G P+V+ YS +I+ CK K V L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 269 YSEM 272
+ EM
Sbjct: 349 FCEM 352
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+ +++ P I+ +S+++ L A + M KG PD+VT SILI
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N YC ++ + + +RG NT+ L++G C G + A E +V G
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++Y L++GLC G AL +L ++ +++ Y+ II +CK V+DA+D+
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Query: 269 YSEM 272
Y +
Sbjct: 454 YCSL 457
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F ++ P ++ +S+++ K K + L +M +G+ + VT +ILI
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
YC G+L A + ++ G PN I N L+ GLC G +++A+ D+ G
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y +I G+CK G+ A + + P++ Y+T++ L K L +A L
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Query: 269 YSEM 272
+ +M
Sbjct: 489 FRKM 492
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 76/154 (49%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
+ F + Q + + +++++ + + A + +M G+ P+I+T ++L++
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G++ A ++ ++ K G + + N +++G+C G V A + + + QG
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI 247
D +Y T++ GL K G R A L R+++ ++
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 108/185 (58%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + F ++ P PSI++F+ +LT+ ++ Y T I S +MEL GI D+ + +ILI
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C+C +L+ A SV+G ++K GY+P+ + +L+ G CL + A +V G+
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V Y TLI+GLCK G+ AL LL ++E G +V+ Y+T++ LC SDA +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 269 YSEMV 273
+M+
Sbjct: 234 LRDMM 238
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA S +++ P+++ ++ ++ L K + A+ L ++ME KG+ D+VT + L+
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C+ G+ + A ++ +++KR P+ + L+ +G + A E + +++
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 213 LDEVSYATLINGLCKTG---DTRAALRLLRQIEG--PNVIMYSTIIDSLCKVKLVSDAYD 267
+ V+Y ++INGLC G D + L+ +G PNV+ Y+T+I CK ++V +
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMAS-KGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 268 LYSEMVAGEFH 278
L+ M F+
Sbjct: 338 LFQRMSCEGFN 348
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA +++ P ++ F+ ++ +K + A L +M + P+ VT + +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G+L A + +G PN + NTL+ G C MV M+ + +GF
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
D +Y TLI+G C+ G R AL + R++ P++I + ++ LC + A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT-PDIITHCILLHGLCVNGEIESALV 407
Query: 268 LYSEMVAGEFHL 279
+ +M E ++
Sbjct: 408 KFDDMRESEKYI 419
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F+ + P+++ ++ +++ K + + L +M +G DI T + LI
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC +G+L A + ++ R P+ I L+ GLC+ G ++ A+ DD+
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y +I+GLCK A L + +EG P+ Y+ +I LCK +A +L
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 269 YSEM 272
M
Sbjct: 479 IRRM 482
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 114/211 (54%), Gaps = 39/211 (18%)
Query: 101 LLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
+++ P PSI EF+ +L+++ KMK + ISL +M+ GI ++ T +ILINC+C Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 161 LTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYAT 220
++ A +++G ++K GY+P+ + L++L+ G C + A+ D +V G+R D +++ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 221 LI-----------------------------------NGLCKTGDTRAALRLLRQIEG-- 243
LI NGLCK GD A LL ++E
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 244 --PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+V++++TIIDSLCK + V DA +L+ EM
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + N++ ++ F+ I+ SL K +H A++L +ME KGIRP++VT S LI+
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C G+ + A ++ +++++ PN + N L+ +G A + HDD++ +
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y +LING C A ++ + P++ Y+T+I CK K V D +L+
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 270 SEM 272
EM
Sbjct: 349 REM 351
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ +++++ PSI+ S +L K S A++L QM G RPD +T + LI+
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ + A +++ +++RG QPN + ++ GLC +G + A + + A
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V + T+I+ LCK AL L +++E PNV+ YS++I LC SDA L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 270 SEMVAGEFH 278
S+M+ + +
Sbjct: 244 SDMIEKKIN 252
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV+ +++++M P I F+ ++ L S A++L +M +G +P++VT +++
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G + AF+++ + + + +I NT++ LC V A+ ++ +G R
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ-IE---GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y++LI+ LC G A +LL IE PN++ ++ +ID+ K +A L
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 269 YSEMV 273
+ +M+
Sbjct: 278 HDDMI 282
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 4/191 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + +++ P+++ F+ ++ + +K + A L M + I PDI T + LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C +L A + ++ + P+ NTL+KG C V+ E ++ +G
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y TLI GL GD A ++ +Q+ +G P+++ YS ++D LC + A ++
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 269 YSEMVAGEFHL 279
+ M E L
Sbjct: 418 FDYMQKSEIKL 428
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ P + ++ ++ K K L +M +G+ D VT + LI
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
H G +A V ++ G P+ + + L+ GLC G +++A+E D + +L
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D Y T+I G+CK G L + PNV+ Y+T+I LC +L+ +AY L
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 270 SEM 272
+M
Sbjct: 489 KKM 491
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F +++ P I+ +S++L L A+ + M+ I+ DI + +I
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G++ + + ++ +G +PN + NT++ GLC K ++Q A + G
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI 241
D +Y TLI + GD A+ L+R++
Sbjct: 498 PDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D F + + ++ ++ L A + QM G+ PDI+T SIL+
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C+ G+L A V + K + + I T+++G+C G V + + +G +
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTII 253
+ V+Y T+I+GLC + A LL++++ P+ Y+T+I
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F +++ P PSII+F+ +L + KMK + I+L +++ G+ D+ T ++L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC+C Q A S +G ++K G++P+ + +L+ G CL ++ AM + +V G +
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V Y T+I+ LCK G AL L Q+E P+V+MY+++++ LC DA L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 269 YSEM 272
M
Sbjct: 235 LRGM 238
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 103/184 (55%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+S N++++M P ++ ++ I+ SL K H + A+SL QME GIRPD+V + L+
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C+ G+ A S++ + KR +P+ I N L+ +G A E +++++
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 213 LDEVSYATLINGLCKTG--DTRAALRLLRQIEG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ +Y +LING C G D + L + +G P+V+ Y+++I+ CK K V DA +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 269 YSEM 272
+ EM
Sbjct: 340 FYEM 343
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 7/187 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F + Q T + I ++ ++ ++ + A + M +G+ P+I T ++L+
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 153 NCYCHLGQLTSAFSVMGNILKR---GYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ 209
+C C+ G++ A + ++ KR G PN N L+ GLC G +++A+ +D+ +
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 210 GFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDA 265
+ ++Y +I G+CK G + A+ L + PNV+ Y+T+I L + L +A
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Query: 266 YDLYSEM 272
+ L+ +M
Sbjct: 515 HVLFRKM 521
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA +N +++M P+I ++ ++ A + + ME KG PD+V + LI
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C ++ A + + ++G NTI TL++G G A E +V++G
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEG--PNVIMYSTIIDSLCKVKLVSDA 265
+ +Y L++ LC G + AL + R+++G PN+ Y+ ++ LC + A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 266 YDLYSEMVAGE 276
++ +M E
Sbjct: 445 LMVFEDMRKRE 455
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 4/188 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA S + + P +I F+ ++ + +K + A L ++M I P+I T + LI
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C G + A + + +G P+ + +L+ G C V AM+ ++ +G
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++Y TLI G + G A + + PN+ Y+ ++ LC V A +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 269 YSEMVAGE 276
+ +M E
Sbjct: 410 FEDMQKRE 417
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 39/219 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ + F +++Q P PSI++FS +L+ + K K+Y ISL H ME+ GI D+ + +I+I
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQ----------------------------------- 177
NC C + A SV+G ++K GY+
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
Query: 178 PNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
P+ +I NT++ G C G+V A+E D + G R D V+Y +L+ GLC +G A RL
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 238 LRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+R + PNVI ++ +ID K S+A LY EM
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ +++ +M P ++ ++ I+ K+ + A+ L +ME G+R D VT + L+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G+ + A +M +++ R PN I ++ +G AM+ ++++ +
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y +LINGLC G A ++L + +G P+V+ Y+T+I+ CK K V + L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 269 YSEM 272
+ EM
Sbjct: 337 FREM 340
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV F+R+ + + ++ ++ L +S A L M ++ I P+++T + +I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + G+ + A + + +R P+ N+L+ GLC+ G V A + D +V +G
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y TLING CK+ +L R++ + I Y+TII + A ++
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 269 YSEM 272
+S M
Sbjct: 372 FSRM 375
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA ++ P++I F+ ++ +K +S A+ L +M + + PD+ T + LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G++ A ++ ++ +G P+ + NTL+ G C V + ++ +G
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG-PNVIMYSTIIDSLCKVKLVSDAYDLYSE 271
D ++Y T+I G + G AA + +++ PN+ YS ++ LC V A L+
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 272 MVAGEFHL 279
M E L
Sbjct: 407 MQKSEIEL 414
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ ++ ++ K K L +M +G+ D +T + +I Y G+ +A +
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ R PN + L+ GLC+ V++A+ +++ LD +Y +I+G+CK
Sbjct: 372 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G+ A L R + P+V+ Y+T+I C+ + + LY +M
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ F + Q I ++ I+ + A + +M+ RP+I T SIL+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 388
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C ++ A + N+ K + + N ++ G+C G V+ A + + +G +
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE 242
D VSY T+I+G C+ + L R+++
Sbjct: 449 PDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 54/235 (22%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ FF+ +++ P + ++ + ++ ++M AISL +ME++ I +I + +ILI
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMK------------------------ 188
C+C +L+ + S G + K G+QP+ + NTL+
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 189 --------------------------GLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
GLCL+G V A + +V +G +D V+Y T++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 223 NGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
NG+CK GDT++AL LL ++E P+V++YS IID LCK SDA L+SEM+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 95/179 (53%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ +++ + H P ++ +S I+ L K H+S A L +M KGI P++ T + +I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C G+ + A ++ ++++R P+ + N L+ +G + A + D+++ +
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
D V+Y ++I G CK A + + P+V+ ++TIID C+ K V + L E+
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV+ F++++++ TP +I F+ ++ L A +L ++M KG+ D+VT ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C +G SA +++ + + +P+ +I + ++ LC G A +++ +G
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ-IE---GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ +Y +I+G C G A RLLR IE P+V+ ++ +I + K + +A L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 269 YSEMV 273
EM+
Sbjct: 389 CDEML 393
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 101 LLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
+ + +P ++ F+ I+ + K + L ++ +G+ + T + LI+ +C +
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 161 LTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYAT 220
L +A + ++ G P+TI N L+ G C ++ A+E + + LD V+Y
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 221 LINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+I+G+CK A L I G P+V Y+ +I C +SDA L+ +M
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F+ +L+ P++ ++ ++ +S A L M + I PD++T + LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G+L A + +L R P+T+ N+++ G C A D + +
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP--- 430
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V++ T+I+ C+ ++LLR+I N Y+T+I C+V ++ A DL
Sbjct: 431 -DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 269 YSEMVA 274
+ EM++
Sbjct: 490 FQEMIS 495
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
+ +++I+ + K A L + + G+ PD+ T +++I+ +C ++ A +
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 171 ILKRGYQPNTIILNTLMKGLCLK-GMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTG 229
+ G++P+ NTL++G CLK G + +++E ++ + GF D + +C+
Sbjct: 598 MKDNGHEPDNSTYNTLIRG-CLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVS 656
Query: 230 DTRAALRLLR 239
D LR
Sbjct: 657 DEEIIENYLR 666
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ P I +++L + + A+ L +++ I D V +I+I+
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C ++ A+ + ++ G +P+ N ++ G C K + A + G
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI 241
D +Y TLI G K G+ ++ L+ ++
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEM 633
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 54/235 (22%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ FF+ +++ P + ++ + ++ ++M AISL +ME++ I +I + +ILI
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMK------------------------ 188
C+C +L+ + S G + K G+QP+ + NTL+
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 189 --------------------------GLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
GLCL+G V A + +V +G +D V+Y T++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 223 NGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
NG+CK GDT++AL LL ++E P+V++YS IID LCK SDA L+SEM+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 95/179 (53%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ +++ + H P ++ +S I+ L K H+S A L +M KGI P++ T + +I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C G+ + A ++ ++++R P+ + N L+ +G + A + D+++ +
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
D V+Y ++I G CK A + + P+V+ ++TIID C+ K V + L E+
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV+ F++++++ TP +I F+ ++ L A +L ++M KG+ D+VT ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C +G SA +++ + + +P+ +I + ++ LC G A +++ +G
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ-IE---GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ +Y +I+G C G A RLLR IE P+V+ ++ +I + K + +A L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 269 YSEMV 273
EM+
Sbjct: 389 CDEML 393
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 101 LLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
+ + +P ++ F+ I+ + K + L ++ +G+ + T + LI+ +C +
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 161 LTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYAT 220
L +A + ++ G P+TI N L+ G C ++ A+E + + LD V+Y
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 221 LINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+I+G+CK A L I G P+V Y+ +I C +SDA L+ +M
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F+ +L+ P++ ++ ++ +S A L M + I PD++T + LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G+L A + +L R P+T+ N+++ G C A D + +
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP--- 430
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V++ T+I+ C+ ++LLR+I N Y+T+I C+V ++ A DL
Sbjct: 431 -DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 269 YSEMVA 274
+ EM++
Sbjct: 490 FQEMIS 495
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ P I +++L + + A+ L +++ I D V +I+I+
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C ++ A+ + ++ G +P+ N ++ G C K + A + G
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI 241
D +Y TLI G K G+ ++ L+ ++
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
+ +++I+ + K A L + + G+ PD+ T +++I+ +C ++ A +
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 171 ILKRGYQPNTIILNTLMKGLCLK-GMVQRAMEFHDDVVAQGFRLD 214
+ G++P+ NTL++G CLK G + +++E ++ + GF D
Sbjct: 598 MKDNGHEPDNSTYNTLIRG-CLKAGEIDKSIELISEMRSNGFSGD 641
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 102/185 (55%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F R++ P PSII+F+ +L+ + KM Y ISL QM++ GI P + T +I++
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C C Q A +G ++K G++P+ + +L+ G C ++ A+ D ++ GF+
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y TLI LCK A+ L Q+ PNV+ Y+ ++ LC++ DA L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 269 YSEMV 273
+M+
Sbjct: 246 LRDMM 250
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA++ F+++L M P+++ ++ ++ L K +H + A+ L +QM G RP++VT + L+
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C +G+ A ++ +++KR +PN I L+ G + A E ++ ++
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y +LINGLC G A ++ +E PN ++Y+T+I CK K V D +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 269 YSEM 272
+ EM
Sbjct: 351 FYEM 354
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 4/174 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + ++ ++ K K + + ++M KG+ + +T ++LI YC +G+ A V
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ R P+ N L+ GLC G V++A+ + + + ++ V+Y +I G+CK
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 228 TGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
G A L + +G PNVI Y+T+I C+ L+ +A L+ +M F
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA +++ P++I F+ ++ + +K+ A L + M + PD+ T LI
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G L A + + + G PN +I TL+ G C V+ M+ ++ +G
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++Y LI G C G A + Q+ P++ Y+ ++D LC V A +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 269 YSEMVAGE 276
+ M E
Sbjct: 421 FEYMRKRE 428
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A FN++ P I ++++L L A+ + M + + +IVT +I+I
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C LG++ AF + ++ +G +PN I T++ G C +G++ A + GF
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Query: 214 DEVSY 218
+E Y
Sbjct: 502 NESVY 506
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 73/150 (48%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D + F + Q + I +++++ + A + +QM + PDI T ++L+
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G++ A + + KR N + +++G+C G V+ A + + ++G +
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE 242
+ ++Y T+I+G C+ G A L ++++
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMK 495
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA++ F + + HP PSI++FS +L ++ K+ Y ISL +E+ GI D+ + + LI
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C+C +L+ A S +G ++K G++P+ + +L+ G C AM D +V G+
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSL 256
+ V Y T+I+ LC+ G AL +L+ ++ P+V+ Y+++I L
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ + +M P ++ ++ ++T L + + + M GI PD++T S LI+
Sbjct: 203 ALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y GQL A +++R PN + N+L+ GLC+ G++ A + + +V++GF
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP 322
Query: 214 DEVSYATLINGLCKTGDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ V+Y TLING CK +++L R + Y+T+ C+ S A +
Sbjct: 323 NAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL 382
Query: 270 SEMVAGEFH 278
MV+ H
Sbjct: 383 GRMVSCGVH 391
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 98/177 (55%), Gaps = 4/177 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+S ++++ + P+++ ++ I+ SL + +TA+ + M+ GIRPD+VT + LI
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
H G + ++ ++++ G P+ I + L+ +G + A + +++++ +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDA 265
+ V+Y +LINGLC G A ++L + +G PN + Y+T+I+ CK K V D
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDG 343
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A N L+ P+ + ++ ++ K K + + M G+ D T + L
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
YC G+ ++A V+G ++ G P+ N L+ GLC G + +A+ +D+
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++Y +I GLCK A L + P+VI Y T++ L + +L +A++L
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Query: 269 YSEM 272
Y +M
Sbjct: 487 YRKM 490
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S +++++ PSI+ F ++ + + A+SL Q+ G P++V + +I+
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID 192
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C GQ+ +A V+ ++ K G +P+ + N+L+ L G + D++ G
Sbjct: 193 SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISP 252
Query: 214 DEVSYATLINGLCKTGDTRAALR----LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D ++++ LI+ K G A + ++++ PN++ Y+++I+ LC L+ +A +
Sbjct: 253 DVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL 312
Query: 270 SEMVAGEF 277
+ +V+ F
Sbjct: 313 NVLVSKGF 320
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%)
Query: 126 YSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNT 185
+S A + +M G+ PD+ T +IL++ C G++ A + ++ K I N
Sbjct: 375 FSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNI 434
Query: 186 LMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPN 245
++KGLC V+ A + +G D ++Y T++ GL + R A L R+++ +
Sbjct: 435 IIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494
Query: 246 VIM 248
+M
Sbjct: 495 GLM 497
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 103/185 (55%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA S F +LQ P PSI++F+ +LT + KM + I L H+ME GI D+ + +ILI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C+C +L+ A +++G ++K G++P+ + L +L+ G C Q A+ D + GF
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDL 268
+ V Y T+INGLCK D AL + +E + + Y+T+I L +DA L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 269 YSEMV 273
+MV
Sbjct: 242 LRDMV 246
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 4/189 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F+ ++ P ++ ++ ++T K K + L +M +G+ D T + LI
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC G+L A V ++ G P+ + N L+ LC G +++A+ +D+
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+D ++Y +I GLC+T + A L R + P+ I Y T+I LC+ L +A L
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 269 YSEMVAGEF 277
M F
Sbjct: 487 CRRMKEDGF 495
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AVS + + P+++ ++ ++ L K + + A+ + + ME KGIR D VT + LI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + G+ T A ++ +++KR PN I L+ +G + A + +++ +
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 213 LDEVSYATLINGLC---KTGDTRAALRLLRQIEG--PNVIMYSTIIDSLCKVKLVSDAYD 267
+ +Y +LING C GD + L+ +G P+V+ Y+T+I CK K V D
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVS-KGCFPDVVTYNTLITGFCKSKRVEDGMK 345
Query: 268 LYSEM 272
L+ EM
Sbjct: 346 LFCEM 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA +++ P++I F+ ++ + +K + A +L +M + + P++ T + LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C G L A + ++ +G P+ + NTL+ G C V+ M+ ++ QG
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-RQIE---GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y TLI+G C+ G A ++ R ++ P+++ Y+ ++D LC + A +
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 269 YSEMVAGE 276
++ E
Sbjct: 417 VEDLQKSE 424
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%)
Query: 140 GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRA 199
G+ PDIVT +IL++C C+ G++ A ++ ++ K + I N +++GLC ++ A
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 200 MEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDS 255
+ +G + D ++Y T+I+GLC+ G R A +L R+++ + I D
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
+++++ PSI+ +L + + A+SL M+ G P++V + +IN C
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
L +A V + K+G + + + NTL+ GL G A D+V + + + +
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 220 TLINGLCKTGDTRAALRL----LRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
LI+ K G+ A L +R+ PNV Y+++I+ C + DA ++ MV+
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A FNR++ +P I+ ++++L L A+ + ++ + DI+T +I+I
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C +L A+ + ++ ++G +P+ I T++ GLC KG+ + A + + GF
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Query: 214 DEVSY 218
E Y
Sbjct: 498 SERIY 502
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F+ + + P+++ F+ ++ K+ + L HQME RPD+ T S LI
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C ++ A + + KRG PN +I TL+ G G + E + ++++G +
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 213 LDEVSYATLINGLCKTGDTRAALR----LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
D V Y TL+NG CK GD AA ++R+ P+ I Y+T+ID C+ V A ++
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 269 YSEM 272
EM
Sbjct: 438 RKEM 441
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 8/172 (4%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISL---SHQMEL-KGIRPDIVTSSILINCYCHLGQLTSA 164
+I +I T+L+ + I L S+Q L KG++PDIV + L+N +C G L +A
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 165 FSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLING 224
+++ +++RG +P+ I TL+ G C G V+ A+E ++ G LD V ++ L+ G
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 225 LCKTG---DTRAALR-LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+CK G D ALR +LR P+ + Y+ ++D+ CK + L EM
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 92/172 (53%), Gaps = 4/172 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
+ ++L P I+ ++ ++ K A ++ M +G+RPD +T + LI+ +C
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G + +A + + + G + + + + L+ G+C +G V A +++ G + D+V+
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 218 YATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDA 265
Y +++ CK GD + +LL++++ P+V+ Y+ +++ LCK+ + +A
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 23/162 (14%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
+ +R+++++PT +I F M + G ++ +IL+N +
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILD-------------------AGFPLNVYVFNILMNKF 250
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
C G ++ A V I KR QP + NTL+ G C G + + R D
Sbjct: 251 CKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDV 310
Query: 216 VSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTII 253
+Y+ LIN LCK A L ++ G PN ++++T+I
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
+ FS ++ + K A +M GI+PD VT +++++ +C G + F ++
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLING 224
+ G+ P+ + N L+ GLC G ++ A D ++ G D+++Y TL+ G
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA +L+ P + ++M++ + K T L +M+ G P +VT ++L+
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKG 189
N C LGQ+ +A ++ +L G P+ I NTL++G
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A FF + TP ++ ++ I++ ++ A L H+M KG+ PD VT + LIN
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G + AF V ++++ G PN + TL+ GLC +G + A E ++ G +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ +Y +++NGLCK+G+ A++L+ + E + + Y+T++D+ CK + A ++
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 270 SEMVA 274
EM+
Sbjct: 550 KEMLG 554
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+ +++ P + ++ ++ K A ++M + I PD++T + +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C +G + A + + +G +P+++ L+ G C G ++ A H+ ++ G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y TLI+GLCK GD +A LL ++ PN+ Y++I++ LCK + +A L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 269 YSEMVAG 275
E A
Sbjct: 514 VGEFEAA 520
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 97/183 (53%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F ++ ++ +++++ + ++ A L MELKG PD+++ S ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G+L + ++ + ++G +PN+ I +++ LC + A E +++ QG
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V Y TLI+G CK GD RAA + ++ P+V+ Y+ II C++ + +A L+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 270 SEM 272
EM
Sbjct: 410 HEM 412
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+ + P + F+ ++ K H A + + M G P++VT + LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G L SA ++ + K G QPN N+++ GLC G ++ A++ + A G
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y TL++ CK+G+ A +L+++ G P ++ ++ +++ C ++ D L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 269 YSEMVA 274
+ M+A
Sbjct: 584 LNWMLA 589
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + + ++ P+I ++ I+ L K + A+ L + E G+ D VT + L++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G++ A ++ +L +G QP + N LM G CL GM++ + + ++A+G
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ ++ +L+ C + +AA + + + GP+ Y ++ CK + + +A+ L+
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 270 SEMVAGEFHLMLS 282
EM F + +S
Sbjct: 655 QEMKGKGFSVSVS 667
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 41/206 (19%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP +I +S ++ + L M+ KG++P+ +I C + +L A
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKG-------------------------------- 194
++++G P+T++ TL+ G C +G
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 195 ----MVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALR----LLRQIEGPNV 246
MV+ FH+ + +G D V++ LING CK G + A R +++ PNV
Sbjct: 398 QIGDMVEAGKLFHE-MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 247 IMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ Y+T+ID LCK + A +L EM
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEM 482
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA N ++Q +P+++ ++ ++ L K +A L H+M G++P+I T + ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G + A ++G G +T+ TLM C G + +A E +++ +G +
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
V++ L+NG C G +LL + +G PN +++++ C + A +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 269 YSEMVA 274
Y +M +
Sbjct: 619 YKDMCS 624
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
+ ++ ++ + K A + +M KG++P IVT ++L+N +C G L ++
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
+L +G PN N+L+K C++ ++ A + D+ ++G D +Y L+ G CK +
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 231 TRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ A L ++++G +V YS +I K K +A +++ +M
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 63/153 (41%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+I+ F++++ L + M KGI P+ T + L+ YC L +A ++
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
++ RG P+ L+KG C ++ A ++ +GF + +Y+ LI G K
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 228 TGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVK 260
A + Q+ + I D K
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 40/186 (21%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHY-STAISLSHQMELKGIRPDIVTSSIL 151
+A F ++L S+ ++ LT L K + +TAI + + G+ ++ + +I+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I+ C LG++ A ++ + +GY P+ I
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVI------------------------------ 282
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
SY+T++NG C+ G+ +L+ R+ PN +Y +II LC++ +++A +
Sbjct: 283 -----SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 268 LYSEMV 273
+SEM+
Sbjct: 338 AFSEMI 343
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A FF + TP ++ ++ I++ ++ A L H+M KG+ PD VT + LIN
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G + AF V ++++ G PN + TL+ GLC +G + A E ++ G +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ +Y +++NGLCK+G+ A++L+ + E + + Y+T++D+ CK + A ++
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 270 SEMVA 274
EM+
Sbjct: 550 KEMLG 554
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+ +++ P + ++ ++ K A ++M + I PD++T + +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C +G + A + + +G +P+++ L+ G C G ++ A H+ ++ G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y TLI+GLCK GD +A LL ++ PN+ Y++I++ LCK + +A L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 269 YSEMVAG 275
E A
Sbjct: 514 VGEFEAA 520
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 97/183 (53%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F ++ ++ +++++ + ++ A L MELKG PD+++ S ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G+L + ++ + ++G +PN+ I +++ LC + A E +++ QG
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V Y TLI+G CK GD RAA + ++ P+V+ Y+ II C++ + +A L+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 270 SEM 272
EM
Sbjct: 410 HEM 412
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+ + P + F+ ++ K H A + + M G P++VT + LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G L SA ++ + K G QPN N+++ GLC G ++ A++ + A G
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y TL++ CK+G+ A +L+++ G P ++ ++ +++ C ++ D L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 269 YSEMVA 274
+ M+A
Sbjct: 584 LNWMLA 589
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + + ++ P+I ++ I+ L K + A+ L + E G+ D VT + L++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G++ A ++ +L +G QP + N LM G CL GM++ + + ++A+G
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ ++ +L+ C + +AA + + + GP+ Y ++ CK + + +A+ L+
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 270 SEMVAGEFHLMLS 282
EM F + +S
Sbjct: 655 QEMKGKGFSVSVS 667
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 41/206 (19%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP +I +S ++ + L M+ KG++P+ +I C + +L A
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKG-------------------------------- 194
++++G P+T++ TL+ G C +G
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 195 ----MVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALR----LLRQIEGPNV 246
MV+ FH+ + +G D V++ LING CK G + A R +++ PNV
Sbjct: 398 QIGDMVEAGKLFHE-MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 247 IMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ Y+T+ID LCK + A +L EM
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEM 482
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA N ++Q +P+++ ++ ++ L K +A L H+M G++P+I T + ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G + A ++G G +T+ TLM C G + +A E +++ +G +
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
V++ L+NG C G +LL + +G PN +++++ C + A +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 269 YSEMVA 274
Y +M +
Sbjct: 619 YKDMCS 624
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
+ ++ ++ + K A + +M KG++P IVT ++L+N +C G L ++
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
+L +G PN N+L+K C++ ++ A + D+ ++G D +Y L+ G CK +
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 231 TRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ A L ++++G +V YS +I K K +A +++ +M
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 63/153 (41%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+I+ F++++ L + M KGI P+ T + L+ YC L +A ++
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
++ RG P+ L+KG C ++ A ++ +GF + +Y+ LI G K
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 228 TGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVK 260
A + Q+ + I D K
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 40/186 (21%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHY-STAISLSHQMELKGIRPDIVTSSIL 151
+A F ++L S+ ++ LT L K + +TAI + + G+ ++ + +I+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I+ C LG++ A ++ + +GY P+ I
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVI------------------------------ 282
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
SY+T++NG C+ G+ +L+ R+ PN +Y +II LC++ +++A +
Sbjct: 283 -----SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 268 LYSEMV 273
+SEM+
Sbjct: 338 AFSEMI 343
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + F +L+ +P++ +++++ + A++L +ME KG P++VT + LI+
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC L ++ F ++ ++ +G +PN I N ++ GLC +G ++ ++ +G+ L
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 214 DEVSYATLINGLCKTGDTRAAL----RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
DEV+Y TLI G CK G+ AL +LR P+VI Y+++I S+CK ++ A +
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 270 SEM 272
+M
Sbjct: 369 DQM 371
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 106/187 (56%), Gaps = 11/187 (5%)
Query: 98 FNRLLQMHP-------TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSI 150
F++ L MH TPS+I ++ ++ S+ K + + A+ QM ++G+ P+ T +
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 151 LINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
L++ + G + A+ V+ + G+ P+ + N L+ G C+ G ++ A+ +D+ +G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 211 FRLDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAY 266
D VSY+T+++G C++ D ALR+ R++ +G P+ I YS++I C+ + +A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 267 DLYSEMV 273
DLY EM+
Sbjct: 506 DLYEEML 512
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA++ + + +P ++ +S +L+ + A+ + +M KGI+PD +T S LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C + A + +L+ G P+ L+ C++G +++A++ H+++V +G
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVS 263
D V+Y+ LINGL K TR A RLL ++ P+ + Y T+I++ ++ S
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 39/218 (17%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ F+++ P+++ ++ ++ K++ L M LKG+ P++++ +++IN
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKG------------------------ 189
C G++ V+ + +RGY + + NTL+KG
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 190 -----------LCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL 238
+C G + RAMEF D + +G +E +Y TL++G + G A R+L
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 239 RQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
R++ P+V+ Y+ +I+ C + DA + +M
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 90/163 (55%), Gaps = 4/163 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+PS++ ++ ++ AI++ M+ KG+ PD+V+ S +++ +C + A
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
V ++++G +P+TI ++L++G C + + A + +++++ G DE +Y LIN C
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 227 KTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDA 265
GD AL+L ++ +G P+V+ YS +I+ L K +A
Sbjct: 532 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 94/184 (51%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F +++ P+ ++ ++ + + + A + +M G P +VT + LIN
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C G++ A +V+ ++ ++G P+ + +T++ G C V A+ ++V +G +
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 214 DEVSYATLINGLCKTGDTRAALRL----LRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D ++Y++LI G C+ T+ A L LR P+ Y+ +I++ C + A L+
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 270 SEMV 273
+EMV
Sbjct: 544 NEMV 547
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 108 PSIIEFSMILTSLLKMK-HYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
P ++ ++ +L + ++ K + S A ++ +M + P++ T +ILI +C G + A +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ + +G PN + NTL+ G C + + + +G + +SY +INGLC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 227 KTGDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+ G + +L R+ + + Y+T+I CK A +++EM+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + +L++ P ++ ++ + A+ L ++M KG+ PD+VT S+LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLM---------------KGLCLKGMVQ 197
N + A ++ + P+ + +TL+ KG C+KGM+
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 198 RAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLC 257
A + + ++ + + D +Y +I+G C+ GD R A L +++ ++++ + +L
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 258 K 258
K
Sbjct: 683 K 683
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI- 152
A+ N +++ P ++ +S+++ L K A L ++ + P VT LI
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 153 NC--------------YCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQR 198
NC +C G +T A V ++L + ++P+ N ++ G C G +++
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 199 AMEFHDDVVAQGFRLDEVSYATLINGLCKTG 229
A + ++V GF L V+ L+ L K G
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F N + P++I ++IL S+ + A L M KG P +VT +ILI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G L A ++ + + G QPN++ N L+ G C + + RA+E+ + +V++G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y T++ LCK G A+ +L Q+ P +I Y+T+ID L K A L
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 269 YSEMVAGEFH 278
EM A +
Sbjct: 472 LDEMRAKDLK 481
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ +R+LQ P +I +++++ + + A+ L +M +G PD+VT ++L+N
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G+L A + ++ G QPN I N +++ +C G A + D++ +GF
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
V++ LIN LC+ G A+ +L ++ PN + Y+ ++ CK K + A +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 270 SEMVA 274
MV+
Sbjct: 403 ERMVS 407
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 4/179 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ Q P+ + ++ +L K K AI +M +G PDIVT + ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G++ A ++ + +G P I NT++ GL G +A++ D++ A+ +
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D ++Y++L+ GL + G A++ + E PN + +++I+ LCK + A D
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDF 541
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P +I ++++++ K + A+S+ +M + PD+VT + ++ C G+L A V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ +L+R P+ I L++ C V AM+ D++ +G D V+Y L+NG+CK
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
G A++ L + PNVI ++ I+ S+C DA L ++M+ F
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 97/184 (52%), Gaps = 7/184 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+S +R M +P ++ ++ IL SL A+ + +M + PD++T +ILI
Sbjct: 190 NALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C + A ++ + RG P+ + N L+ G+C +G + A++F +D+ + G +
Sbjct: 247 EATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 213 LDEVSYATLINGLCKTGDTRAALRL----LRQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ +++ ++ +C TG A +L LR+ P+V+ ++ +I+ LC+ L+ A D+
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 269 YSEM 272
+M
Sbjct: 367 LEKM 370
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV N+L +P +I ++ ++ L K AI L +M K ++PD +T S L+
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
G++ A + G +PN + N++M GLC RA++F ++ +G +
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI 241
+E SY LI GL G + AL LL ++
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 92/184 (50%), Gaps = 7/184 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ F ++ P II + ++ ++ A + +E G PD++T +++I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC G++ +A SV+ + P+ + NT+++ LC G +++AME D ++ +
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D ++Y LI C+ A++LL ++ P+V+ Y+ +++ +CK + +A
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 269 YSEM 272
++M
Sbjct: 297 LNDM 300
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
+E + L +++ M G PDI+ + LI +C LG+ A ++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
+ G P+ I N ++ G C G + A+ D + D V+Y T++ LC +G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGK 219
Query: 231 TRAAL----RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ A+ R+L++ P+VI Y+ +I++ C+ V A L EM
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 159 GQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSY 218
G+L F + N++ G P+ I TL++G C G ++A + + + G D ++Y
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 219 ATLINGLCKTGDTRAALRLLRQIE-GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+I+G CK G+ AL +L ++ P+V+ Y+TI+ SLC + A ++ M+
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ + + P I +S ++ L + AI H+ E GIRP+ VT + ++
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
C Q A + ++ RG +PN L++GL +GM + A+E +++ +G
Sbjct: 528 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 96/179 (53%), Gaps = 4/179 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ N + + S++ + +++ + K A+ +M+ G+ D+V + LI
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C G+L ++ +L+RG P I NTL++G C G ++ A E + ++ +G R
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 214 DEVSYATLINGLCKTGDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ +Y LI+GLC G T+ AL+LL + E PN + Y+ II+ LCK LV+DA ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 6/184 (3%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
+ F+ +L+ +P I ++ ++ K+ A + M +G+RP++ T + LI+
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
C +G+ A ++ ++++ +PN + N ++ LC G+V A+E + + + R D
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 216 VSYATLINGLCKTGDTRAALRLL------RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
++Y L+ GLC GD A +LL P+VI Y+ +I LCK + A D+Y
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 270 SEMV 273
+V
Sbjct: 448 DLLV 451
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AVS + + P + ++ ++ + K A+ L+++M+ G +VT ILI+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C G++ A + + G + + ++ +L++G C G + R D+V+ +G
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 214 DEVSYATLINGLCKTGDTRAALRLLR-QIE---GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
++Y TLI G CK G + A + IE PNV Y+ +ID LC V +A L
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 270 SEMV 273
+ M+
Sbjct: 341 NLMI 344
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ N +++ P+ + +++I+ L K + A+ + M+ + RPD +T +IL+
Sbjct: 335 EALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 153 NCYCHLGQLTSAFSVMGNILKRG--YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
C G L A ++ +LK P+ I N L+ GLC + + +A++ +D +V +
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 211 FRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAY 266
D V+ L+N K GD A+ L +QI ++ Y+ +ID CK +++ A
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514
Query: 267 DLYSEMVAGEFH 278
L +M E
Sbjct: 515 GLLCKMRVSELQ 526
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 87/184 (47%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A SF+ ++L+ + + S +L ++M+ A + M +G ++ +IL+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C + A S++ + + P+ NT+++G C +++A+E +++ G
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
V++ LI+ CK G A+ L++++ ++++Y+++I C + L+
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 270 SEMV 273
E++
Sbjct: 271 DEVL 274
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ L++ + +++L S LK + A+ L Q+ I + T + +I+
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C G L A ++ + QP+ N L+ LC +G + +A +++
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Query: 214 DEVSYATLINGLCKTGDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D VS+ +I+G K GD ++A LL R P++ YS +I+ K+ + +A +
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Query: 270 SEMVAGEFH 278
+MV F
Sbjct: 623 DKMVDSGFE 631
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F + + + P ++ F++++ LK +A SL M G+ PD+ T S LIN
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ LG L A S ++ G++P+ I ++++K +G + E +V + L
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667
Query: 214 DEVSYATLINGLCK-TGDTRAALRLLR 239
D+ T+++ +C + + A RLLR
Sbjct: 668 DKELTCTVMDYMCNSSANMDLAKRLLR 694
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS+ +++ +L+SL K A L +M+ PD+V+ +I+I+ G + SA S+
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + + G P+ + L+ G + A+ F D +V GF D +++
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646
Query: 228 TGDTRAALRLLRQIEGPNVIMYS----TIIDSLC 257
G+T L++++ ++++ T++D +C
Sbjct: 647 QGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 104 bits (259), Expect = 8e-23, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 89/161 (55%), Gaps = 4/161 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+++++ L K A + +M KGI PD+ + +LIN + LG + A S+ ++
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ G PN II N L+ G C G +++A E D++ +G + V+Y T+I+G CK+GD
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 233 AALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
A RL +++ P+ +Y+T++D C++ V A ++
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 74.7 bits (182), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 4/190 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A SF +++ P+ + ++ ++ +++A +M G+ P+ V + LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N YC G++ A S +++ +G + LM GL V A E ++ +G
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
D SY LING K G+ + A + ++ EG PNVI+Y+ ++ C+ + A +L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 269 YSEMVAGEFH 278
EM H
Sbjct: 685 LDEMSVKGLH 694
Score = 72.4 bits (176), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ + + P I ++ ++ L K K A S +M G++P+ T I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y + SA + + + G PN ++ L+ C KG V A + +V QG
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y L+NGL K A + R++ G P+V Y +I+ K+ + A +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 269 YSEMV 273
+ EMV
Sbjct: 650 FDEMV 654
Score = 66.6 bits (161), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 93/190 (48%), Gaps = 12/190 (6%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + + I+ K + A L +M+LKG+ PD + L++ C L + A ++
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF----RLDEVSYATLIN 223
G K+G +T N L+ + G + E + ++ F + ++V+Y +I+
Sbjct: 755 FGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 224 GLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF-- 277
LCK G+ AA L Q++ P VI Y+++++ K+ ++ + ++ E +A
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 278 -HLMLSLIMH 286
H+M S+I++
Sbjct: 874 DHIMYSVIIN 883
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+S+++ LLK ++ A L H+M GI I G + A ++ ++
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
G P +L++G C + V++ E ++ + + +Y T++ G+C +GD
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 233 AALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
A +++++ PNV++Y+T+I + + DA + EM
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + +++ L K+K A SL +M+ G+ D T S+LI+ +A +
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ G + + + + +G++++A D ++A G +YA+LI G C+
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 228 TGDTRAALRLLRQIEGPNVIM----YSTIIDSLCKVKLVSDAYDLYSEMVA 274
+ R LL +++ N+++ Y T++ +C + AY++ EM+A
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + +++++ L K + A L HQM+ + P ++T + L+N Y +G+ F V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ-----GFRLDEVSYATLI 222
+ G +P+ I+ + ++ +GM +A+ D + A+ G +L + L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 223 NGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDA 265
+G K G+ A +++ N++ I DS ++L++++
Sbjct: 923 SGFAKVGEMEVAEKVME-----NMVRLQYIPDSATVIELINES 960
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ +++ + H ++ ++ I+ L K H+ A +L +M KGI PD++T S +I+
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C G+ T A ++ ++++R P+ + + L+ L +G V A E + D++ +G
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP 179
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
++Y ++I+G CK A R+L + P+V+ +ST+I+ CK K V + +++
Sbjct: 180 TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239
Query: 270 SEM 272
EM
Sbjct: 240 CEM 242
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA +++ P ++ FS ++ +L+K S A + M +GI P +T + +I
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C +L A ++ ++ + P+ + +TL+ G C V ME ++ +G
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y TLI+G C+ GD AA LL + PN I + +++ SLC K + A+ +
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Query: 269 YSEMVAGEFH 278
++ E H
Sbjct: 309 LEDLQKSEGH 318
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 8/106 (7%)
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
+++ G +P+ + TLM GLC +G V +A+ D +V +G + Y T+INGLCK GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 231 TRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
T +AL LL ++E +V++Y+ IID LCK A +L++EM
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM 102
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 140 GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRA 199
G RPD+VT + L+N C G++ A +++ +++ G+QP I+N GLC G + A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIIN----GLCKMGDTESA 60
Query: 200 MEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDS 255
+ + + V Y +I+ LCK G A L ++ P+VI YS +IDS
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 256 LCKVKLVSDAYDLYSEMV 273
C+ +DA L +M+
Sbjct: 121 FCRSGRWTDAEQLLRDMI 138
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ F+ ++ L A++L +M +G +P +IN C +G SA ++
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + + + + +I N ++ LC G A ++ +G D ++Y+ +I+ C+
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 228 TGDTRAALRLLRQ-IE---GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+G A +LLR IE P+V+ +S +I++L K VS+A ++Y +M+
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ + +LQ P + ++ +++ L K+ A+ + QM + P+ VT + LI+
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C Q+ A + + +G P+ N+L++GLCL + AME +++ ++G
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
DE +Y LI+ LC G AL +L+Q+E +VI Y+T+ID CK +A +++
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 270 SEM 272
EM
Sbjct: 494 DEM 496
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV ++++ +P+ + ++ ++++L K A L+ + KGI PD+ T + LI
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C A + + +G +P+ N L+ LC KG + A+ + G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
++Y TLI+G CK TR A + ++E N + Y+T+ID LCK + V DA L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 269 YSEMV 273
+M+
Sbjct: 528 MDQMI 532
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F + P ++M++ SL A+++ QMEL G ++T + LI+
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C + A + + G N++ NTL+ GLC V+ A + D ++ +G +
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D+ +Y +L+ C+ GD + A +++ + P+++ Y T+I LCK V A L
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + F+ ++ L +++ A+ L +M KG PD T ++LI+ C G+L A ++
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G + I NTL+ G C + A E D++ G + V+Y TLI+GLCK
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 228 TGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
+ A +L+ Q +EG P+ Y++++ C+ + A D+ M +
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + F++++ +L + AI + M G+ PD T + ++ Y G L A +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ-GFRLDEVSYATLINGLC 226
+++ G + + +N ++ G C +G V+ A+ F ++ Q GF D+ ++ TL+NGLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 227 KTGDTRAALR----LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
K G + A+ +L++ P+V Y+++I LCK+ V +A ++ +M+
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
S+I ++ ++ K A + +ME+ G+ + VT + LI+ C ++ A +M
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
++ G +P+ N+L+ C G +++A + + + G D V+Y TLI+GLCK
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 229 GDTRAALRLLR--QIEGPNVI--MYSTIIDSLCKVKLVSDAYDLYSEMV 273
G A +LLR Q++G N+ Y+ +I L + + ++A +L+ EM+
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 2/151 (1%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA ++++ P ++ +LT + A + M G PDIVT LI
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G++ A ++ +I +G N +++GL K A+ +++ Q
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 213 -LDEVSYATLINGLCKTGDT-RAALRLLRQI 241
D VSY + GLC G R A+ L ++
Sbjct: 643 PPDAVSYRIVFRGLCNGGGPIREAVDFLVEL 673
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 7/185 (3%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
+ + ++ ++ + L+ A L ++M +G D +T + LI C G++ A S+
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
+L+ G+ P+ I N L+ GLC GMV+ A+EF ++V +G D V++ +LINGLC+
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 229 GDTRAALRLLR--QIEG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF---HLML 281
G L + R Q EG P+ + ++T++ LCK V DA L E + F H
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 282 SLIMH 286
S+++
Sbjct: 708 SILLQ 712
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + N + P+ + F+ ++++ K A+ + +M KG +PD+ T + LI
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C + ++ A ++ +++ G NT+ NTL+ +G ++ A + +++V QG
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 213 LDEVSYATLINGLCKTGDTRAAL----RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
LDE++Y +LI GLC+ G+ A ++LR P+ I + +I+ LC+ +V +A +
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF 621
Query: 269 YSEMV 273
EMV
Sbjct: 622 QKEMV 626
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 95/170 (55%), Gaps = 4/170 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + ++ ++ K A+ + H M KG +P++ + +IL++ +C LG++ A++V
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G +PNT+ N L+ C + + A+E ++ +G + D ++ +LI+GLC+
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 228 TGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+ + AL LLR + EG N + Y+T+I++ + + +A L +EMV
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ + M P F+ ++ L K + A + ++M ++G PD +T L+
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVV-AQGF 211
N C +G++ +A ++ R +P +I NTL+ G G + A D+V + G
Sbjct: 330 NGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
D +Y +LI G K G AL +L + PNV Y+ ++D CK+ + +AY+
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 268 LYSEMVA 274
+ +EM A
Sbjct: 446 VLNEMSA 452
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + F +L P++ F +++ + + +A+SL M G P+ V LI+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
++ A ++ + G P+ N ++ GLC + A + + ++ +GF
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
D+++Y L+NGLCK G AA L +I P +++++T+I + DA + S+MV
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A S F ++L+ PS I ++++ L + A+ +M L+G PDIVT + LIN
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G++ ++ + G P+T+ NTLM LC G V A D+ + GF
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 214 DEVSYATLINGL 225
+ +++ L+ +
Sbjct: 703 NHRTWSILLQSI 714
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Query: 99 NRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHL 158
+++++ P++ +++ + L + A+ + + +G +PD++T + LI C
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 159 GQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSY 218
+ A +G ++ G +P++ NTL+ G C GMVQ A D V GF D+ +Y
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 219 ATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+LI+GLC G+T AL L + G PNVI+Y+T+I L ++ +A L +EM
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV L++ P P +I ++ ++ L K + A +M +G+ PD T + LI
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G + A ++G+ + G+ P+ +L+ GLC +G RA+ ++ + +G +
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ + Y TLI GL G A +L ++ P V ++ +++ LCK+ VSDA L
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 270 SEMVA 274
M++
Sbjct: 450 KVMIS 454
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 97/183 (53%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ FN L P++I ++ ++ L A L+++M KG+ P++ T +IL+N
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C +G ++ A ++ ++ +GY P+ N L+ G + ++ A+E D ++ G
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 214 DEVSYATLINGLCKTGDTRAALR----LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y +L+NGLCKT + ++ + PN+ ++ +++SLC+ + + +A L
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 270 SEM 272
EM
Sbjct: 555 EEM 557
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A N + + P + F++++ L KM S A L M KG PDI T +ILI
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y ++ +A ++ +L G P+ N+L+ GLC + ME + +V +G
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++ L+ LC+ AL LL +++ P+ + + T+ID CK + AY L
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 269 YSEM 272
+ +M
Sbjct: 589 FRKM 592
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ F ++L + + F+ +L L K L ++ +G+ P++ T ++ I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G+L A ++G ++++G +P+ I N L+ GLC Q A + +V +G
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y TLI G CK G + A R++ G P+ Y ++ID LC + A L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 269 YSEMVA 274
++E +
Sbjct: 379 FNEALG 384
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV+ F R+ P++ ++ I++ L+ ++ A + +M +GI PD+ + +I +
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTI------------------------------- 181
+C + +A ++ N+ +G + N +
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS 213
Query: 182 ----ILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALR- 236
N L++ LC KG V+ + D V+ +G + +Y I GLC+ G+ A+R
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 237 ---LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
L+ Q P+VI Y+ +I LCK +A +MV
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 7/187 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D + + +++ P++ F+++L SL + + A+ L +M+ K + PD VT LI
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQ--PNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
+ +C G L A+++ ++ Y+ +T N ++ K V A + ++V +
Sbjct: 574 DGFCKNGDLDGAYTLF-RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 211 FRLDEVSYATLINGLCKTGDTRAALR-LLRQIEG---PNVIMYSTIIDSLCKVKLVSDAY 266
D +Y +++G CKTG+ + LL +E P++ +I+ LC V +A
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 267 DLYSEMV 273
+ MV
Sbjct: 693 GIIHRMV 699
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ N + +++ + ++ + + L +M G+ + T + L+
Sbjct: 165 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLR 224
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G + ++ ++KRG PN N ++GLC +G + A+ ++ QG +
Sbjct: 225 VLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKP 284
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D ++Y LI GLCK + A L ++ EG P+ Y+T+I CK +V A +
Sbjct: 285 DVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV 344
Query: 270 SEMVAGEF 277
+ V F
Sbjct: 345 GDAVFNGF 352
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ F++++ ++ K+ A+ L ++ G +PD + ++ +C L + + A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G +P+ I NTL+ GL G V+ A + +V G+ D +Y +L+NG+C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G++ AL LL ++E PN Y+T++ LCK +L+ +LY M
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMM 396
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ I+ + S A+ + +M+ +G+ PD +T + LI G++ A
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ GY+P+T +LM G+C KG A+ +++ A+G ++ +Y TL++GLCK
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Query: 228 TGDTRAALRLLRQIEGPNVIM----YSTIIDSLCKVKLVSDAYDLYSEMV 273
+ L ++ V + Y+T++ SL K V++AY+++ V
Sbjct: 383 ARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAV 432
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV + ++ + P I ++ ++ L K A M G PD T + L+
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G+ A S++ + RG PN NTL+ GLC ++ + ME ++ + + G +
Sbjct: 343 NGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVK 402
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL 238
L+ YATL+ L K+G A +
Sbjct: 403 LESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Query: 93 DAVSFFNRLLQMHPT--PSIIEFSMILTSLLKMKHYSTAISLSHQ----MELKGIRPDIV 146
D V F +L+ P P F ++L+ + ++IS H+ M G+ PD V
Sbjct: 103 DTVKLFQHILKSQPNFRPGRSTFLILLSHACRAP--DSSISNVHRVLNLMVNNGLEPDQV 160
Query: 147 TSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDV 206
T+ I + C G++ A +M + ++ P+T N L+K LC + EF D++
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM 220
Query: 207 VAQ-GFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKL 261
+ D VS+ LI+ +C + + R A+ L+ ++ P+ +Y+TI+ C +
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 262 VSDAYDLYSEM 272
S+A +Y +M
Sbjct: 281 GSEAVGVYKKM 291
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 38/218 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F ++ P++ +++++ SL + S A++L +ME GI+P+I T ++LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQ--------------- 197
+ C + A ++G +L++G PN I N L+ G C +GM++
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 198 -------------------RAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL 238
+AM + ++ + D V+Y +LI+G C++G+ +A RLL
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 239 RQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ P+ Y+++IDSLCK K V +A DL+ +
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ ++ SL K K A L +E KG+ P++V + LI+ YC G++ A +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ +L + PN++ N L+ GLC G ++ A + +V G + + LI+ L K
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 228 TGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
GD A +Q+ P+ Y+T I + C+ + DA D+ ++M
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
+ +L+ P+I ++ ++ K+ + A ++ G+ PD T + LI YC
Sbjct: 206 YMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEF----HDDVVAQGFRL 213
L SAF V + +G + N + L+ GLC+ + AM+ DD R
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR- 324
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+Y LI LC + AL L++++E PN+ Y+ +IDSLC A +L
Sbjct: 325 ---TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 270 SEMVAGEFHLMLSLIMH 286
+M+ E LM ++I +
Sbjct: 382 GQML--EKGLMPNVITY 396
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ +L SL + + +M + P+I T + ++N YC LG + A + I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ G P+ +L+ G C + + A + +++ +G R +EV+Y LI+GLC
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 233 AALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
A+ L +++ P V Y+ +I SLC + S+A +L EM
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 87/185 (47%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ N++L+ P ++ ++ ++ + ++ +A L M +G+ PD T + +I+
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C ++ A + ++ ++G PN ++ L+ G C G V A + ++++
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ +++ LI+GLC G + A L ++ P V + +I L K AY +
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 270 SEMVA 274
+M++
Sbjct: 626 QQMLS 630
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A FN + + + ++ ++ L + A+ L +M+ P + T ++LI
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C + + A +++ + + G +PN L+ LC + ++A E ++ +G
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCK 258
+ ++Y LING CK G A+ ++ +E PN Y+ +I CK
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 95 VSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISL-SHQMELKGIRPDIVTSSILIN 153
V ++++ TP+ + ++ + ++ + A + H +GI P + + L++
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C L + A V+ +++ G+ P L+ GL KG +R +++ G+
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE 242
DE+++ +I+G+ K G A L +E
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVME 893
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
++L + P+ + F+ ++ L A L +M G++P + T +ILI+
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G A+S +L G +P+ T ++ C +G + A + + G D +
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 218 YATLINGLCKTGDTRAALRLLRQI 241
Y++LI G G T A +L+++
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRM 698
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 95 VSFFNRLLQMHPTPSIIEFSMILTSLLKMKHY-STAISLSHQMELKGIRPDIVTSSILIN 153
+S F ++L+ + TP + IL L+ + Y A L L G+ P+ + ++L+
Sbjct: 139 LSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQ 198
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C L+ A+ + G +L+R P+ L++G C KG V AME DD++ +GF
Sbjct: 199 AFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVP 258
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +SY TL+N LC+ R A +LL +++ P+++ Y+T+I C+ DA +
Sbjct: 259 DRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVL 318
Query: 270 SEMVA 274
+M++
Sbjct: 319 DDMLS 323
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 4/179 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++L+ P + + +++ + + A+ L M KG PD ++ + L+N
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C QL A+ ++ + +G P+ + NT++ G C + A + DD+++ G
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ VSY TLI GLC G + L ++ +G P+ + + ++ C V +A D+
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV 387
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + ++ ++ K+ + +M+ PD++T + LINC+C G+L
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ G +PN + +TL+ C +GM+Q+A++F+ D+ G +E +Y +LI+ CK
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 228 TGDTRAALRLLRQ-----IEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G+ A RL + +E NV+ Y+ +ID LC + + +A +L+ +M
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEW-NVVTYTALIDGLCDAERMKEAEELFGKM 463
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 97/185 (52%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D FF ++ P++ +++++ + K A L +M+ +G+ PD VT + +I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + +G+L + +P+ I N L+ C G + +EF+ ++ G +
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 213 LDEVSYATLINGLCKTGDTRAALRL---LRQIE-GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ VSY+TL++ CK G + A++ +R++ PN Y+++ID+ CK+ +SDA+ L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 269 YSEMV 273
+EM+
Sbjct: 425 GNEML 429
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D V FF + M P +I ++ ++ K + +M+ G++P++V+ S L+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C G + A ++ + G PN +L+ C G + A ++++ G
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y LI+GLC + A L +++ PN+ Y+ +I K K + A +L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 269 YSEM 272
+E+
Sbjct: 495 LNEL 498
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
+ F+ + P+++ +S ++ + K AI M G+ P+ T + LI+
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C +G L+ AF + +L+ G + N + L+ GLC ++ A E + G
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ SY LI+G K + AL LL +++G P++++Y T I LC ++ + A +
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 270 SEM 272
+EM
Sbjct: 531 NEM 533
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA N +LQ+ +++ ++ ++ L + A L +M+ G+ P++ + + LI
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + + A ++ + RG +P+ ++ T + GLC ++ A +++ G +
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPN----VIMYSTIIDSLCKVKLVSDAYDL 268
+ + Y TL++ K+G+ L LL +++ + V+ + +ID LCK KLVS A D
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD- 598
Query: 269 YSEMVAGEFHL 279
Y ++ +F L
Sbjct: 599 YFNRISNDFGL 609
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 5/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F ++ P++ ++ ++ +K K+ A+ L ++++ +GI+PD++ I
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C L ++ +A VM + + G + N++I TLM G + D++
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG-----PNVIMYSTIIDSLCKVKLVSDAYD 267
+ V++ LI+GLCK A+ +I N +++ +ID LCK V A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 268 LYSEMV 273
L+ +MV
Sbjct: 635 LFEQMV 640
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 39/204 (19%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P F + + L+ + AI +M+ + P + + L++ + LG+
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLING--- 224
+++ G +P N ++ +C +G V+ A +++ +G D V+Y ++I+G
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 225 --------------------------------LCKTGDTRAALRLLRQIEG----PNVIM 248
CK G L R+++G PNV+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 249 YSTIIDSLCKVKLVSDAYDLYSEM 272
YST++D+ CK ++ A Y +M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDM 393
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 100/184 (54%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A++ R++ +P++ ++ ++ SL K + + A L +M G+RP+ VT SILI
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C G+L +A S +G ++ G + + N+L+ G C G + A F +++ +
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
V+Y +L+ G C G ALRL ++ G P++ ++T++ L + L+ DA L
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 269 YSEM 272
++EM
Sbjct: 530 FNEM 533
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+R+ ++ P+ + +S+++ + TA+S +M G++ + + LI
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C G +++A M ++ + +P + +LM G C KG + +A+ + ++ +G
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
++ TL++GL + G R A++L ++ PN + Y+ +I+ C+ +S A++
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 269 YSEM 272
EM
Sbjct: 565 LKEM 568
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ + PSI F+ +L+ L + A+ L ++M ++P+ VT +++I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G ++ AF + + ++G P+T L+ GLCL G A F D + L
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLY 269
+E+ Y L++G C+ G AL + +++ V + Y +ID K K + L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 270 SEM 272
EM
Sbjct: 671 KEM 673
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV FN + + + P+ + +++++ + S A +M KGI PD + LI
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C GQ + A + + K + N I L+ G C +G ++ A+ ++V +G
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
LD V Y LI+G K D + LL+++ P+ ++Y+++ID+ K +A+ +
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 269 YSEMV 273
+ M+
Sbjct: 705 WDLMI 709
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + S +L L+K +H+ A+ L + M GIRPD+ + +I C L L+ A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ G N + N L+ GLC K V A+ D+ + + D V+Y TL+ GLCK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 228 TGDTRAALRLLRQ----------------IEG-----------------------PNVIM 248
+ L ++ + +EG PN+ +
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 249 YSTIIDSLCKVKLVSDAYDLYSEM 272
Y+ +IDSLCK + +A L+ M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRM 393
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ P+++ ++ ++ + A+ L H+M KGI P I T + L++
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
G + A + + + +PN + N +++G C +G + +A EF ++ +G
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLY 269
D SY LI+GLC TG A + + N I Y+ ++ C+ + +A +
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 270 SEMV 273
EMV
Sbjct: 636 QEMV 639
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
+ + +L + +PS S ++ L K A++L ++ G+ P++ + LI+
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 154 CYCHLGQLTSA---FSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
C + A F MG I G +PN + + L+ C +G + A+ F ++V G
Sbjct: 376 SLCKGRKFHEAELLFDRMGKI---GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 211 FRLDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDA 265
+L Y +LING CK GD AA + +++E P V+ Y++++ C ++ A
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE-PTVVTYTSLMGGYCSKGKINKA 491
Query: 266 YDLYSEMVA 274
LY EM
Sbjct: 492 LRLYHEMTG 500
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 41/220 (18%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+S ++Q ++ + +++ LK K L +M +G++PD V + +I
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMV---------------- 196
+ G AF + ++ G PN + ++ GLC G V
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 197 --------------------QRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALR 236
Q+A+E H+ ++ +G + +Y LI G C+ G A
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 237 LLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L+ ++ G P+ I Y+T+I+ LC+ V A +L++ M
Sbjct: 809 LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+SF ++ S+ ++ ++ K S A +M K + P +VT + L+
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G++ A + + +G P+ TL+ GL G+++ A++ +++ +
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDA 265
+ V+Y +I G C+ GD A L+++ P+ Y +I LC S+A
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 103 QMHPT---PSIIEFSMILTSLLKMK-HYSTAISLSHQMELKGIRPDIVTSSILINCYCHL 158
+M P P+ + + L L K + A+ L H LKG+ + T ++LI +C
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL-HNAILKGLLANTATYNMLIRGFCRQ 800
Query: 159 GQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSY 218
G++ A ++ ++ G P+ I T++ LC + V++A+E + + +G R D V+Y
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860
Query: 219 ATLINGLCKTGDTRAALRL----LRQIEGPN 245
TLI+G C G+ A L LRQ PN
Sbjct: 861 NTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A ++ ++ P+ + ++ ++ L K + A L +M+ P+ VT +
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Query: 153 NCYCHLGQLTSAFSV-MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
+ G++ +V + N + +G NT N L++G C +G ++ A E ++ G
Sbjct: 760 DILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
D ++Y T+IN LC+ D + A+ L + P+ + Y+T+I C + A +
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 268 LYSEMV 273
L +EM+
Sbjct: 879 LRNEML 884
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
+I+ +++++ L K + A+ + + K ++PD+VT L+ C + + +M
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
+L + P+ +++L++GL +G ++ A+ VV G + Y LI+ LCK
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 229 GDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
A L ++ PN + YS +ID C+ + A EMV
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV L P ++ + ++ L K++ + + + +M P S L+
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
G++ A +++ ++ G PN + N L+ LC A D + G R
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDL 268
++V+Y+ LI+ C+ G AL L ++ +V Y+++I+ CK +S A
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 269 YSEMV 273
+EM+
Sbjct: 460 MAEMI 464
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 97/179 (54%), Gaps = 4/179 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F++ L ++ FS + +K +TA + +M +GI P++VT +ILI C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G++ AF + G ILKRG +P+ + ++L+ G C G ++ ++D++ G+ D V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 218 YATLINGLCKTG----DTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
Y L++GL K G R ++++L Q NV++++++ID C++ +A ++ M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F + Q P +I +S ++ K L Q KG++ D+V S I+
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y G L +A V +L +G PN + L+KGLC G + A + ++ +G
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLV 262
V+Y++LI+G CK G+ R+ L + P+V++Y ++D L K L+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 93 DAVSFFNRLLQM----HPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTS 148
D + +RLL + P P+++ F ++ K A L ME +GI PD++
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 149 SILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVA 208
S LI+ Y G L + L +G + + ++ ++ + G + A + ++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 209 QGFRLDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSD 264
QG + V+Y LI GLC+ G A + QI G P+++ YS++ID CK +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 265 AYDLYSEMV 273
+ LY +M+
Sbjct: 445 GFALYEDMI 453
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA FFN L++ P I+ ++ ++ ++ A + +++ P+ VT +ILI
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C + A + + ++G +PN + LM ++ + + +++ +G
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ-IEG---PNVIMYSTIIDSLCKVKLVSDAYDL 268
VSY+ +I+GLCK G A + Q I+ P+V+ Y+ +I CKV + +A L
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 798
Query: 269 YSEMV 273
Y M+
Sbjct: 799 YEHML 803
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
+ R+L +P+++ +++++ L + A + Q+ +G+ P IVT S LI+ +C
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 158 LGQLTSAFSVMGNILKRGYQP-----------------------------------NTII 182
G L S F++ +++K GY P N ++
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 183 LNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL----RLL 238
N+L+ G C A++ + G + D ++ T++ G AL R+
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 239 RQIEGPNVIMYSTIIDSLCK 258
+ P+ + Y T+ID+ CK
Sbjct: 559 KMGLEPDALAYCTLIDAFCK 578
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 80/184 (43%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F R+ +M P + + ++ + K + + L M+ I DI +++I
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 608
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ ++ A N+++ +P+ + NT++ G C + A + + F
Sbjct: 609 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 668
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+ LI+ LCK D A+R+ + PN + Y ++D K + ++ L
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 269 YSEM 272
+ EM
Sbjct: 729 FEEM 732
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 140 GIRPDIVTSS--ILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQ 197
GI P V++ +L +C G++T A +++RG++ + N ++KGL + ++
Sbjct: 211 GIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIE 268
Query: 198 RAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTII 253
A V+ G + V++ TLING CK G+ A L + +E P++I YST+I
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 254 DSLCKVKLVSDAYDLYSE 271
D K ++ + L+S+
Sbjct: 329 DGYFKAGMLGMGHKLFSQ 346
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F + + +PSI+ +S+I+ L K A ++ HQ + PD+V +ILI YC
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHD 204
+G+L A + ++L+ G +P+ ++ L + K ++ + + HD
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVHD 835
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 89/218 (40%), Gaps = 39/218 (17%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F ++L +++ F+ ++ ++ + A+ + M + GI+PD+ T + ++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLC----------LKGMVQR----- 198
G+L A + + K G +P+ + TL+ C L ++QR
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 199 --------------------AMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL 238
A +F ++++ D V+Y T+I G C A R+
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 239 RQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
++ GPN + + +I LCK + A ++S M
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 697
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
G I G + +L+ L KG V +A++FH V+ +GFR+ VS ++ GL
Sbjct: 210 GGIEPSGVSAHGFVLDALF----CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SV 264
Query: 229 GDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
A RLL + PNV+ + T+I+ CK + A+DL+ M
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVM 312
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 58/123 (47%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F+ + + P+ + + ++ K + L +M+ KGI P IV+ SI+I+
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G++ A ++ + P+ + L++G C G + A ++ ++ G +
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Query: 214 DEV 216
D++
Sbjct: 810 DDL 812
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 97/179 (54%), Gaps = 4/179 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F++ L ++ FS + +K +TA + +M +GI P++VT +ILI C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G++ AF + G ILKRG +P+ + ++L+ G C G ++ ++D++ G+ D V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 218 YATLINGLCKTG----DTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
Y L++GL K G R ++++L Q NV++++++ID C++ +A ++ M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F + Q P +I +S ++ K L Q KG++ D+V S I+
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y G L +A V +L +G PN + L+KGLC G + A + ++ +G
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKL 261
V+Y++LI+G CK G+ R+ L + P+V++Y ++D L K L
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 93 DAVSFFNRLLQM----HPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTS 148
D + +RLL + P P+++ F ++ K A L ME +GI PD++
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 149 SILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVA 208
S LI+ Y G L + L +G + + ++ ++ + G + A + ++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 209 QGFRLDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSD 264
QG + V+Y LI GLC+ G A + QI G P+++ YS++ID CK +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 265 AYDLYSEMV 273
+ LY +M+
Sbjct: 445 GFALYEDMI 453
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA FFN L++ P I+ ++ ++ ++ A + +++ P+ VT +ILI
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C + A + + ++G +PN + LM ++ + + +++ +G
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ-IEG---PNVIMYSTIIDSLCKVKLVSDAYDL 268
VSY+ +I+GLCK G A + Q I+ P+V+ Y+ +I CKV + +A L
Sbjct: 710 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 769
Query: 269 YSEMV 273
Y M+
Sbjct: 770 YEHML 774
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 140 GIRPDIVTSS--ILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQ 197
GI P V++ +L +C G++T A +++RG++ + N ++KGL + ++
Sbjct: 211 GIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIE 268
Query: 198 RAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTII 253
A V+ G + V++ TLING CK G+ A L + +E P++I YST+I
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 254 DSLCKVKLVSDAYDLYSE 271
D K ++ + L+S+
Sbjct: 329 DGYFKAGMLGMGHKLFSQ 346
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 91/224 (40%), Gaps = 45/224 (20%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
+ R+L +P+++ +++++ L + A + Q+ +G+ P IVT S LI+ +C
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 158 LGQLTSAFSVMGNILKRGYQP-----------------------------------NTII 182
G L S F++ +++K GY P N ++
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 183 LNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI------NGLCKTGDTRAALR 236
N+L+ G C A++ + G + D ++ T++ + CK L+
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 237 LL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
L R ++ + + +I L K + DA ++ ++ G+
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F + + +PSI+ +S+I+ L K A ++ HQ + PD+V +ILI YC
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHD 204
+G+L A + ++L+ G +P+ ++ L + K ++ + + HD
Sbjct: 760 VGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVHD 806
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
+++ S++ + K + + L M+ I DI +++I+ ++ A
Sbjct: 536 TVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 595
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
N+++ +P+ + NT++ G C + A + + F + V+ LI+ LCK
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655
Query: 229 GDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
D A+R+ + PN + Y ++D K + ++ L+ EM
Sbjct: 656 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 58/123 (47%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F+ + + P+ + + ++ K + L +M+ KGI P IV+ SI+I+
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G++ A ++ + P+ + L++G C G + A ++ ++ G +
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Query: 214 DEV 216
D++
Sbjct: 781 DDL 783
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
G I G + +L+ L KG V +A++FH V+ +GFR+ VS ++ GL
Sbjct: 210 GGIEPSGVSAHGFVLDALF----CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SV 264
Query: 229 GDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
A RLL + PNV+ + T+I+ CK + A+DL+ M
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVM 312
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 99 NRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHL 158
N + M+ +P+ + F++++ +L K++ AI + M + PD T L++ C
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 159 GQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSY 218
++ A ++ + G P+ +I N L+ GLC KG + R + D++ +G +EV+Y
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 219 ATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
TLI+GLC G A+ LL ++ PN + Y T+I+ L K + +DA L S M
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 275 GEFHL 279
+HL
Sbjct: 356 RGYHL 360
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+S++++ L K A+SL +M KG +P+IV S+L++ C G+ A ++ ++
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
G PN ++LMKG G+ + A++ ++ G ++ Y+ LI+GLC G +
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 233 AALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
A+ + ++ P+ + YS+II LC + + A LY EM+ E
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 39/220 (17%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F + + P + ++ L K + A+ L +M+ +G P V ++LI+
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G LT ++ N+ +G PN + NTL+ GLCLKG + +A+ + +V+
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE------------------------------- 242
++V+Y TLINGL K A+RLL +E
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 243 --------GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
PN+++YS ++D LC+ ++A ++ + M+A
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AVS R++ P+ + + ++ L+K + + A+ L ME +G + S+LI+
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
G+ A S+ + ++G +PN ++ + L+ GLC +G A E + ++A G
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ +Y++L+ G KTG A+++ ++++ N YS +ID LC V V +A ++
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 270 SEMV 273
S+M+
Sbjct: 491 SKML 494
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + ++ ++ L A+SL +M P+ VT LIN + T A +
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ +RGY N I + L+ GL +G + AM + +G + + V Y+ L++GLC+
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G A +L ++ PN YS+++ K L +A ++ EM
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQM---ELKGIRPDIVTSS 149
+A+ ++++L + P + +S I+ L + A+ L H+M E +PD+VT +
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 150 ILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLK-GMVQRAMEFHDDVVA 208
IL++ C ++ A ++ ++L RG P+ I NT + L K + F +++V
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Query: 209 QGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
+ + VS A I + +L + P ++ I+ +CK K ++ A D
Sbjct: 605 RLLKRQRVSGACTIVEV-----------MLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
R L P + ++ ++ L K Y A L +M KGI P++++ S LIN C+ G
Sbjct: 236 RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL--DEVS 217
Q+ AFS + +LKRG PN L++L+KG L+G A++ + ++ +GF L + V+
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQPNVVA 354
Query: 218 YATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
Y TL+ G C G+ A+ + +E PN+ Y ++I+ K + A ++++M+
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV F R+ + PS+ ++ +L +LL + M+ G P++ T ++L+
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C ++ A ++ + +G P+ + T++ +C G+V+ E +A+ F
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEP 244
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLY 269
Y LINGLCK D + A L+R++ +G PNVI YST+I+ LC + A+
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 270 SEMVAGEFH 278
++M+ H
Sbjct: 305 TQMLKRGCH 313
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 6/186 (3%)
Query: 93 DAVSFFNRLLQ-MHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
DA+ +N++++ P+++ ++ ++ + A+S+ ME G P+I T L
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
IN + G L A + +L G PN ++ +++ LC + A + + +
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG-----PNVIMYSTIIDSLCKVKLVSDAY 266
++ I GLC G A ++ RQ+E PN++ Y+ ++D L K + +AY
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 267 DLYSEM 272
L E+
Sbjct: 514 GLTREI 519
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P++ ++++L +L K A L +M KG PD V+ + +I+ C +G +
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE---- 234
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
G L ++P + N L+ GLC + + A E ++V +G + +SY+TLIN LC
Sbjct: 235 -GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293
Query: 228 TGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAG 275
+G A L Q+ G PN+ S+++ DA DL+++M+ G
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 7/181 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVT-SSILI 152
A +++ +P++I +S ++ L A S QM +G P+I T SS++
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 153 NCYCHLGQLTSAFSVMGNILKR-GYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
C+ G A + +++ G QPN + NTL++G C G + +A+ + G
Sbjct: 325 GCFLR-GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYD 267
+ +Y +LING K G A+ + ++ G PNV++Y+ ++++LC+ +A
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Query: 268 L 268
L
Sbjct: 444 L 444
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 94 AVSFFNRLLQMHPTP-SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
A F ++ Q H P +I+ ++ +L L K A L+ ++ ++G+ T + L+
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVA--QG 210
+ C+ G A ++G ++ G P+ I +N ++ C +G +RA + D V +
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK 595
Query: 211 FRLDEVSYATLINGLCKTGDTRAALRLL-RQIEG---PNVIMYSTIID 254
+R D +SY +I GLC++ + LL R I P++ +S +I+
Sbjct: 596 WRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 7/190 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK-GIRPDIVTSSIL 151
+A S + + + PS+ F+ + L A + QME + P+IVT + L
Sbjct: 440 EAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNEL 499
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
++ ++ A+ + I RG + ++ NTL+ G C G+ A++ ++ G
Sbjct: 500 LDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK 559
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLL------RQIEGPNVIMYSTIIDSLCKVKLVSDA 265
DE++ +I CK G A ++L R+ P+VI Y+ +I LC+ D
Sbjct: 560 SPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619
Query: 266 YDLYSEMVAG 275
L M++
Sbjct: 620 VILLERMISA 629
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIR--PDIVTSSILINCYCHLGQLTSAFSVMGN 170
F +++ L + L QM+L+G D+ S +I+ Y +G A +
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS--VISVYRQVGLAERAVEMFYR 136
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
I + G P+ I N ++ L + +Q + D+ GF + +Y L+ LCK
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 231 TRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
A +LL ++ P+ + Y+T+I S+C+V LV + +L
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 5/177 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQM-ELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
P+ I +S ++ L A+ L M +GI PD VT +++IN +C G++ A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ + K G PN + LM G C G +Q A + D+V G +LD V Y TL+N C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 227 KTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHL 279
+ G+T A++LL +++ + + Y+ I+ L +A + + + HL
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 93 DAVSFFNRLLQMHP-TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
+AV F ++ +P + F++++ + A + M+ G P++ S L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
+N +C +G++ A + K G + +T+ TLM C G AM+ ++ A
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIM----YSTIIDSLC 257
R D ++Y ++ GL G + AL++L Q V + Y I+++LC
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC 419
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
P++ +S ++ K+ A +++ G++ D V + L+NC+C G+ A
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMK 359
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++G + + +T+ N +++GL +G + A++ D ++G L++ SY ++N LC
Sbjct: 360 LLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC 419
Query: 227 KTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCK 258
G+ A++ L R I P+ ++ ++ LC+
Sbjct: 420 CNGELEKAVKFLSVMSERGI-WPHHATWNELVVRLCE 455
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 103/193 (53%), Gaps = 5/193 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A SF + Q P+++ ++ ++ + +MK+ A S+ +M KG+ P+ T SILI+
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG-FR 212
+ +A+ V+ + ++ N +I NT++ GLC G +A E +++ + +
Sbjct: 528 GFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ SY ++I+G K GDT +A+ R++ + PNV+ ++++I+ CK + A ++
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647
Query: 269 YSEMVAGEFHLML 281
EM + E L L
Sbjct: 648 THEMKSMELKLDL 660
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 122 KMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTI 181
K A S ME KGI P++V + ++ +C + + A S+ +L++G +PN
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 182 ILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQ- 240
+ L+ G Q A + + + A F +EV Y T+INGLCK G T A +L+
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 241 IEGPNVIM----YSTIIDSLCKVKLVSDAYDLYSEM 272
I+ M Y++IID KV A + Y EM
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 40/220 (18%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A S F+ +L+ P+ +S+++ K K A + +QM + V + +IN
Sbjct: 503 ARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIIN 562
Query: 154 CYCHLGQLTSAFSVMGNILKR------------------------------------GYQ 177
C +GQ + A ++ N++K G
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS 622
Query: 178 PNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
PN + +L+ G C + A+E ++ + +LD +Y LI+G CK D + A L
Sbjct: 623 PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 238 LRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
++ PNV +Y+++I + + A DLY +MV
Sbjct: 683 FSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV + + + +P+++ F+ ++ K A+ ++H+M+ ++ D+ LI+
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C + +A+++ + + G PN + N+L+ G G + A++ + +V G
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y T+I+GL K G+ A L ++ P+ I++ +++ L K A +
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML 788
Query: 270 SEM 272
EM
Sbjct: 789 EEM 791
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F+ R+ + PS + ++ LK + A+ + + I + + I +
Sbjct: 399 AIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFL- 457
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C G++ +A S + + ++G +PN + N +M C + A +++ +G
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLY 269
+ +Y+ LI+G K D + A ++ Q+ N ++Y+TII+ LCKV S A ++
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 270 SEMVAGEFHLM 280
++ + + M
Sbjct: 578 QNLIKEKRYSM 588
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
S+I + ++ K A+ L ++ME +G+ PD V S+++ +C ++ A
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMV-QRAMEFHDD----VVAQGFRLDEVSYATLIN 223
+ P++++++T+++G CLK + A+E +D +A GF +++
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQG-CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL---- 458
Query: 224 GLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
CK G AA L+ +E PNV+ Y+ ++ + C++K + A ++SEM+
Sbjct: 459 -FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML 511
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 65/131 (49%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ + +++ + + ++ ++ LLK + + A L ++ GI PD + +L+N
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
GQ A ++ + K+ PN ++ +T++ G +G + A HD+++ +G
Sbjct: 774 GLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVH 833
Query: 214 DEVSYATLING 224
D+ + L++G
Sbjct: 834 DDTVFNLLVSG 844
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 82/184 (44%), Gaps = 5/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK-GIRPDIVTSSIL 151
+AV F R++ P + FS+ + + K A+ L +M K G+ T + +
Sbjct: 257 EAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSV 316
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I + G + A VM ++ G + I +L+ G C + +A++ + + +G
Sbjct: 317 IVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYD 267
D+V ++ ++ CK + A+ +++ P+ ++ T+I K + A +
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALE 436
Query: 268 LYSE 271
++++
Sbjct: 437 IFND 440
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 76/163 (46%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + F+ L ++ P++ ++ +++ + AI L +M GI D+ T + +I+
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
G + A + +L G P+ I+ L+ GL KG +A + +++ +
Sbjct: 739 GLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTP 798
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSL 256
+ + Y+T+I G + G+ A RL ++ ++ T+ + L
Sbjct: 799 NVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL 841
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 4/156 (2%)
Query: 127 STAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTL 186
S+A+ L + M G++P++VT + LI+ +C +L A V G + PNT+ NTL
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 187 MKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG--- 243
+ G +G + A F++D+V G + D ++Y LI GLCK TR A + +++++
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 244 -PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFH 278
PN +S +I C K ++LY M+ H
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 8/173 (4%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP + F + + +K + A QM+ G P + + + ++ G++ A
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ + PN LN +M G C G + + +E D+ GFR +VSY TLI G C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 227 KTGDTRAALRLLRQIEG-----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
+ G +AL+ L+ + G PNV+ ++T+I C+ + +A ++ EM A
Sbjct: 285 EKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P++ + ++SLL A+ +M I P+ T +++++ YC G+L +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ + G++ + NTL+ G C KG++ A++ + + G + + V++ TLI+G C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+ A ++ +++ PN + Y+T+I+ + A+ Y +MV
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 73/165 (44%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F + ++ P+ + ++ ++ + + A M GI+ DI+T + LI
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C + A + + K PN+ + L+ G C++ R E + ++ G
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLC 257
+E ++ L++ C+ D A ++LR++ ++ + S + +C
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVC 490
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+++ F+ ++ + A + +M+ + P+ VT + LIN Y G AF
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC- 226
+++ G Q + + N L+ GLC + ++A +F ++ + + +++ LI G C
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 227 -KTGDTRAAL--RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
K D L ++R PN ++ ++ + C+ + A + EMV
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 4/156 (2%)
Query: 127 STAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTL 186
S+A+ L + M G++P++VT + LI+ +C +L A V G + PNT+ NTL
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 187 MKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG--- 243
+ G +G + A F++D+V G + D ++Y LI GLCK TR A + +++++
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 244 -PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFH 278
PN +S +I C K ++LY M+ H
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 8/173 (4%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP + F + + +K + A QM+ G P + + + ++ G++ A
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ + PN LN +M G C G + + +E D+ GFR +VSY TLI G C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 227 KTGDTRAALRLLRQIEG-----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
+ G +AL+ L+ + G PNV+ ++T+I C+ + +A ++ EM A
Sbjct: 285 EKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P++ + ++SLL A+ +M I P+ T +++++ YC G+L +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ + G++ + NTL+ G C KG++ A++ + + G + + V++ TLI+G C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+ A ++ +++ PN + Y+T+I+ + A+ Y +MV
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 73/165 (44%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F + ++ P+ + ++ ++ + + A M GI+ DI+T + LI
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C + A + + K PN+ + L+ G C++ R E + ++ G
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLC 257
+E ++ L++ C+ D A ++LR++ ++ + S + +C
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVC 490
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+++ F+ ++ + A + +M+ + P+ VT + LIN Y G AF
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC- 226
+++ G Q + + N L+ GLC + ++A +F ++ + + +++ LI G C
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 227 -KTGDTRAAL--RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
K D L ++R PN ++ ++ + C+ + A + EMV
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
+ + ++ + + A+ + +M+ I P + T + LI CH G+ A
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
+ + G P+ N+++ G C +G V++A EF+++ + F+ D + L+NGLCK G
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 231 TRAALRLLRQ-IEGPNV--IMYSTIIDSLCKVKLVSDAYDLYSEM 272
T AL IE V + Y+T+I + CK K + +AYDL SEM
Sbjct: 607 TEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 96/191 (50%), Gaps = 6/191 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ + ++ TP++ F+ ++ L A+ ++ G+ PD T + +I
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G++ AF +K ++P+ N L+ GLC +GM ++A+ F + ++ + +
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EV 623
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V+Y T+I+ CK + A LL ++E P+ Y++ I L + +S+ +L
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Query: 270 SEMVAGEFHLM 280
+ +G+F M
Sbjct: 684 KKF-SGKFGSM 693
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 136 MELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGM 195
+++ G PDIVT LI Y +G L+ A +M + ++G + NTI LNT++ LC +
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 196 VQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYST 251
+ A + +GF +DEV+Y TLI G + AL + +++ P V +++
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 252 IIDSLC---KVKLVSDAYDLYSE 271
+I LC K +L + +D +E
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAE 549
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 92/183 (50%), Gaps = 5/183 (2%)
Query: 100 RLLQMHP-TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHL 158
L+ MH +P I+ + ++ + LK+ S A+ + +M KGI+ + +T + +++ C
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 159 GQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSY 218
+L A +++ + KRG+ + + TL+ G + V++A+E D++ ++
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524
Query: 219 ATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
+LI GLC G T A+ ++ P+ +++II CK V A++ Y+E +
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK 584
Query: 275 GEF 277
F
Sbjct: 585 HSF 587
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 93 DAVSFFNRLL-QMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
DA+ R++ + P + ++ IL ++ K S L M+ G+ P+ VT + L
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
+ YC LG L AF ++ + + P+ N L+ GLC G ++ +E D + +
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCK 258
+ D V+Y TLI+G + G + A +L+ Q+E N + ++ + LCK
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + ++ ++ K+ A + M+ + PD+ T +ILIN C+ G + +
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
M + QP+ + NTL+ G G+ A + + + G + ++V++ + LCK
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Query: 228 TGDTRAALRLLRQIE-----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
A R ++++ P+++ Y T+I + KV +S A ++ EM
Sbjct: 393 EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM 442
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 8/138 (5%)
Query: 143 PDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCL---KGMVQRA 199
P I ++ Y H G+ A + +++ +PN + NTL+ GL + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 200 MEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQI-----EGPNVIMYSTIID 254
E DD+V G L+ ++ L+NG C G AL +L ++ P+ + Y+TI+
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 255 SLCKVKLVSDAYDLYSEM 272
++ K +SD +L +M
Sbjct: 249 AMSKKGRLSDLKELLLDM 266
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIR--PDIVTSSI 150
+A++ F R+ + H P + ++ I+ +L ++ ++ A L QM+L G R PD T +I
Sbjct: 183 EALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTI 242
Query: 151 LINCYCHLG-----------QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRA 199
LI+ YC G ++ A + +L RG+ P+ + N L+ G C + RA
Sbjct: 243 LISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRA 302
Query: 200 MEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG-----PNVIMYSTIID 254
+E +D+ +G ++V+Y + I T + A+ ++R ++ P Y+ +I
Sbjct: 303 LELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIH 362
Query: 255 SLCKVKLVSDAYDLYSEMVAG 275
+L + + ++A DL EMV
Sbjct: 363 ALVETRRAAEARDLVVEMVEA 383
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 145 IVTSSI--LINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEF 202
+ T+SI L+ C G + A + + + +P+ NT++ LC G ++A
Sbjct: 163 VTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFL 222
Query: 203 HDDVVAQGFRL--DEVSYATLINGLCK----TGDTRA-------ALRLLRQI--EG--PN 245
D + GFR D +Y LI+ C+ TG +A A R+ R++ G P+
Sbjct: 223 LDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPD 282
Query: 246 VIMYSTIIDSLCKVKLVSDAYDLYSEM 272
V+ Y+ +ID CK + A +L+ +M
Sbjct: 283 VVTYNCLIDGCCKTNRIGRALELFEDM 309
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV F+++ + P+++ F+ ++ L Y A +M +G+ P ++T SIL+
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
++ A+ V+ + K+G+ PN I+ N L+ G + +A+E D +V++G
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE--GPNVIM--YSTIIDSLCKVKLVSDAYDL 268
L +Y TLI G CK G A RLL+++ G NV ++++I LC + A
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 269 YSEMV 273
EM+
Sbjct: 458 VGEML 462
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F +L + +P + +++ L K +S A+ L Q KG D TS+ L++
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G+L AF + IL RG + + NTL+ G C K + A F D++V +G +
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y+ LI GL A++ + P+V YS +ID CK + + + +
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 270 SEMVA 274
EM++
Sbjct: 634 DEMMS 638
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F + +++ P +S+++ L M AI + G+ PD+ T S++I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C + ++ + QPNT++ N L++ C G + A+E +D+ +G
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ +Y +LI G+ A L + +EG PNV Y+ +ID K+ + L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 269 YSEMVAGEFH 278
EM + H
Sbjct: 738 LREMHSKNVH 747
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS +++LTSL++ + + + KG+ PD+ + IN +C G++ A +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G PN + NT++ GL + G A F + +V +G ++Y+ L+ GL +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
A +L+++ PNVI+Y+ +IDS + ++ A ++ MV+
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F++ + P + +S+++ K + +M K ++P+ V + LI
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
YC G+L+ A + ++ +G PN+ +L+KG+ + V+ A +++ +G
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ Y LI+G K G LLR++ PN I Y+ +I + V++A L
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 269 YSEM 272
+EM
Sbjct: 773 LNEM 776
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
+ ++ +++ K A +M +G++PD T SILI ++ ++ A +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
+ G P+ + ++ G C + EF D+++++ + + V Y LI C++G
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 231 TRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
AL L ++ PN Y+++I + + V +A L+ EM
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 92/221 (41%), Gaps = 39/221 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F ++++ P++I +S+++ L + K A + +M KG P+++ + LI
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + G L A + ++ +G + NTL+KG C G A ++++ GF
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 213 LDEVSYA-----------------------------------TLINGLCKTGDTRAALRL 237
+++ S+ TLI+GLCK G AL L
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 238 LRQIEGPNVIM----YSTIIDSLCKVKLVSDAYDLYSEMVA 274
Q ++ + ++ LC+ + +A+ + E++
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P+ ++ ++ + + A L +M ++G+ P++ + LI+ Y LGQ+
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ + + PN I ++ G G V A +++ +G D ++Y I G
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 796
Query: 227 KTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKV 259
K G +L +G + Y+ II+ K+
Sbjct: 797 KQGG------VLEAFKGSDEENYAAIIEGWNKL 823
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 78/178 (43%), Gaps = 4/178 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ FF+ ++ + P+ + ++ ++ + + S A+ L M+ KGI P+ T + LI
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ ++ A + + G +PN L+ G G + + ++ ++
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAY 266
++++Y +I G + G+ A RLL ++ P+ I Y I K V +A+
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV F+++ + P+++ F+ ++ L Y A +M +G+ P ++T SIL+
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
++ A+ V+ + K+G+ PN I+ N L+ G + +A+E D +V++G
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE--GPNVIM--YSTIIDSLCKVKLVSDAYDL 268
L +Y TLI G CK G A RLL+++ G NV ++++I LC + A
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 269 YSEMV 273
EM+
Sbjct: 458 VGEML 462
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F +L + +P + +++ L K +S A+ L Q KG D TS+ L++
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G+L AF + IL RG + + NTL+ G C K + A F D++V +G +
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y+ LI GL A++ + P+V YS +ID CK + + + +
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 270 SEMVA 274
EM++
Sbjct: 634 DEMMS 638
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F + +++ P +S+++ L M AI + G+ PD+ T S++I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C + ++ + QPNT++ N L++ C G + A+E +D+ +G
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ +Y +LI G+ A L + +EG PNV Y+ +ID K+ + L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 269 YSEMVAGEFH 278
EM + H
Sbjct: 738 LREMHSKNVH 747
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS +++LTSL++ + + + KG+ PD+ + IN +C G++ A +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G PN + NT++ GL + G A F + +V +G ++Y+ L+ GL +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
A +L+++ PNVI+Y+ +IDS + ++ A ++ MV+
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F++ + P + +S+++ K + +M K ++P+ V + LI
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
YC G+L+ A + ++ +G PN+ +L+KG+ + V+ A +++ +G
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ Y LI+G K G LLR++ PN I Y+ +I + V++A L
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 269 YSEM 272
+EM
Sbjct: 773 LNEM 776
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
+ ++ +++ K A +M +G++PD T SILI ++ ++ A +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
+ G P+ + ++ G C + EF D+++++ + + V Y LI C++G
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 231 TRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
AL L ++ PN Y+++I + + V +A L+ EM
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 92/221 (41%), Gaps = 39/221 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F ++++ P++I +S+++ L + K A + +M KG P+++ + LI
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + G L A + ++ +G + NTL+KG C G A ++++ GF
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 213 LDEVSYA-----------------------------------TLINGLCKTGDTRAALRL 237
+++ S+ TLI+GLCK G AL L
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 238 LRQIEGPNVIM----YSTIIDSLCKVKLVSDAYDLYSEMVA 274
Q ++ + ++ LC+ + +A+ + E++
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P+ ++ ++ + + A L +M ++G+ P++ + LI+ Y LGQ+
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ + + PN I ++ G G V A +++ +G D ++Y I G
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 796
Query: 227 KTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKV 259
K G +L +G + Y+ II+ K+
Sbjct: 797 KQGG------VLEAFKGSDEENYAAIIEGWNKL 823
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 78/178 (43%), Gaps = 4/178 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ FF+ ++ + P+ + ++ ++ + + S A+ L M+ KGI P+ T + LI
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ ++ A + + G +PN L+ G G + + ++ ++
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAY 266
++++Y +I G + G+ A RLL ++ P+ I Y I K V +A+
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 42/222 (18%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D + +++ P++ F++++ +L K + A + M++ G P++V+ + LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 153 NCYCHLG--------------------------------------QLTSAFSVMGNILKR 174
+ YC LG L + V +L +
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 175 GYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAA 234
+PN I N+L+ GLC G + A+ D +V+ G + + ++Y LING CK + A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 235 LRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L + ++G P MY+ +ID+ CK+ + D + L EM
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 3/182 (1%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
++ F +L P++I ++ ++ L S AIS+ +M G++P+++T + LIN
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C L A + G++ +G P T + N L+ C G + +++ +G
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG---PNVIMYSTIIDSLCKVKLVSDAYDLYS 270
D +Y LI GLC+ G+ AA +L Q+ P+++ + +++ C+ A L
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLK 494
Query: 271 EM 272
EM
Sbjct: 495 EM 496
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + +++ +P++ F++++ K + ++ + +M + ++P++++ + LIN
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C+ G+++ A S+ ++ G QPN I N L+ G C M++ A++ V QG
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 214 DEVSYATLINGLCKTG--DTRAALRLLRQIEG--PNVIMYSTIIDSLCKVKLVSDAYDLY 269
Y LI+ CK G D AL+ + EG P+V Y+ +I LC+ + A L+
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Query: 270 SEMVA 274
++ +
Sbjct: 460 DQLTS 464
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 94/184 (51%), Gaps = 5/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+S ++++ P++I ++ ++ K A+ + ++ +G P ++LI
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC LG++ F++ + + G P+ N L+ GLC G ++ A + D + ++G
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP 468
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D V++ L+ G C+ G++R A LL+++ P + Y+ ++ CK + A ++
Sbjct: 469 -DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Query: 269 YSEM 272
++M
Sbjct: 528 RTQM 531
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F + P+ ++M++ + K+ +L +ME +GI PD+ T + LI
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G + +A + + +G P+ + + LM+G C KG ++A ++ G +
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGP-----NVIMYSTIIDSLCKVKLVSDAYD 267
++Y ++ G CK G+ +AA + Q+E NV Y+ ++ + + DA
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 268 LYSEMV 273
L +EM+
Sbjct: 563 LLNEML 568
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 89/197 (45%), Gaps = 42/197 (21%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRG 175
++ +LLK + + +M + I+P++ T +++IN C G++ A VM ++ G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 176 YQPNTIILNTLMKGLC--------------LKGMVQR----------------------- 198
PN + NTL+ G C LK MV+
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 199 -AMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTII 253
+M+ +++ Q + + +SY +LINGLC G A+ + ++ PN+I Y+ +I
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 254 DSLCKVKLVSDAYDLYS 270
+ CK ++ +A D++
Sbjct: 374 NGFCKNDMLKEALDMFG 390
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+PS++ ++++++ + S A + +ME +GI+P VT +ILI+ + + A
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ ++ + G P+ + L+ G C+KG + A +V + +EV Y T+I G C
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 227 KTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
K G + AL+LL+++E PNV Y +I+ LCK + +A L +M+
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 95/183 (51%), Gaps = 5/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
++S+FN ++ P F+ +LT ++ ++ S ++ + K + D+ + ILI
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIK 171
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G++ +F ++ + + G+ PN +I TL+ G C KG +++A + ++ G
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+E +Y LINGL K G + + +++ PN+ Y+ +++ LCK DA+ ++
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 270 SEM 272
EM
Sbjct: 292 DEM 294
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F+ + + + +I+ ++ ++ L + + A + QM+ GI P+++T + LI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C +G+L A S+ ++ RG P+ + N L+ G C KG A + ++ +G +
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+V+Y LI+ ++ + A++L +E P+V YS +I C +++A L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 269 YSEMV 273
+ MV
Sbjct: 466 FKSMV 470
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P++ ++ ++ L K A + +M +G+ +IVT + LI C +L A V
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G PN I NTL+ G C G + +A+ D+ ++G V+Y L++G C+
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
GDT A ++++++E P+ + Y+ +ID+ + + A L
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+++++ L K + +M+ G+ P++ T + ++N C G+ AF V +
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+RG N + NTL+ GLC + + A + D + + G + ++Y TLI+G C G
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 233 AALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
AL L R ++ P+++ Y+ ++ C+ S A + EM
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
L + +P+++ ++ ++ K A L +M G+ + T ++LIN G
Sbjct: 188 ELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNG 247
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
F + + + G PN N +M LC G + A + D++ +G + V+Y
Sbjct: 248 VKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307
Query: 220 TLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
TLI GLC+ A +++ Q++ PN+I Y+T+ID C V + A L
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 99 NRLLQMHPT---PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
N +MH P+++ ++ ++ S +S A L M K I PDIVT S LIN +
Sbjct: 31 NLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAF 90
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
+++ A + +L+ P TI N+++ G C + V A D + ++G D
Sbjct: 91 VKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDV 150
Query: 216 VSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSE 271
V+++TLING CK + + ++ N + Y+T+I C+V + A DL +E
Sbjct: 151 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNE 210
Query: 272 MVAG-------EFHLMLS 282
M++ FH ML+
Sbjct: 211 MISCGVAPDYITFHCMLA 228
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 4/190 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA +++ P I+ FS ++ + +K + S A + +M I P +T + +I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C ++ A ++ ++ +G P+ + +TL+ G C V ME ++ +G
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y TLI+G C+ GD AA LL ++ P+ I + ++ LC K + A+ +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 269 YSEMVAGEFH 278
++ E H
Sbjct: 243 LEDLQKSEDH 252
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 91/174 (52%), Gaps = 4/174 (2%)
Query: 103 QMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLT 162
Q H ++ + I+ L K ++ A +L +M KGI P+++T + +I+ +CH G+ +
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 163 SAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
A ++ +++++ P+ + + L+ + V A E + +++ ++Y ++I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 223 NGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+G CK A R+L + P+V+ +ST+I+ CK K V + +++ EM
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 176
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 126 YSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNT 185
+ + ++L +M+ KGI+ S++I C G+L ++V N++++G +PN I
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 186 LMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLR--QIEG 243
L+ G G V+ A+ ++ +GF+ D V+Y+ ++NGLCK G AL + +G
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 244 --PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
N + YS++ID L K V +A L+ EM
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
FS+++ L K + ++ M KG +P++ ++LI+ Y G + A ++ ++
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
G++P+ + + ++ GLC G V+ A+++ G ++ + Y++LI+GL K G
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 233 AALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
A RL ++ + Y+ +ID+ K + V +A L+ M E
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
+ ++ + P++ ++ ++ L+ +A + ME I+PDIVT + +I YC
Sbjct: 210 WRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCK 269
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
GQ A + ++ RG++ + I T+++ + + ++ +G ++ +
Sbjct: 270 AGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHA 329
Query: 218 YATLINGLCKTGDTRAAL----RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
++ +I GLCK G ++R+ PNV +Y+ +ID K V DA L M+
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 274 AGEFH 278
F
Sbjct: 390 DEGFK 394
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ + F +++ P++ +++++ K AI L H+M +G +PD+VT S+++
Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVV 404
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G++ A G N++ ++L+ GL G V A +++ +G
Sbjct: 405 NGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCT 464
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPN-----VIMYSTIIDSLCKVKLVSDAYD 267
D Y LI+ K A+ L +++E V Y+ ++ + K +A
Sbjct: 465 RDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALK 524
Query: 268 LYSEMV 273
L+ M+
Sbjct: 525 LWDMMI 530
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK-GIRPDIVTSSIL 151
+A F + + T ++ ++ + K + AI+L +ME + G + T +IL
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
++ + A + ++ +G P L GLCL G V RA + D++ G
Sbjct: 510 LSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGV 569
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQI 241
LD + +IN LCK G + A +L I
Sbjct: 570 ILD-AACEDMINTLCKAGRIKEACKLADGI 598
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Query: 145 IVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHD 204
+ ++ LI + LG + V + + G +P N LM GL V A +
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 205 DVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVK 260
+ + + D V+Y T+I G CK G T+ A+ LR +E + I Y T+I +
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 261 LVSDAYDLYSEM 272
LY EM
Sbjct: 307 DFGSCVALYQEM 318
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A N++ +PS+ +++++ + + + +ME G P++V+ LI
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC C +L A V ++ RG P I N L+ G C KG ++ A F +++ +G
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
L+ V+Y TLI+GL TG A LL +I P+V Y+++I V L
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621
Query: 269 YSEM-------VAGEFHLMLSL 283
Y EM +HL++SL
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISL 643
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
R+ H PS+I F+ +L L K A ++ +M+ G PD T SIL + Y
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
+ +A V + G + N + L+ LC +G +++A E +A+G +EV Y
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 220 TLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDA 265
T+I+G C+ GD A + +E P+ + Y+ +I C++ + +A
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
+ FNR+ PS+ +++++ L K K + A L +M + + P ++T + LI+
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQR--------------- 198
YC G +F V + +P+ I NTL+KGL GMV+
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 199 --------------------AMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL 238
A+ ++ V G +++ + + L+N LCK G A +L
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 239 -RQIEG---PNVIMYSTIIDSLCK 258
R++ PN ++Y+T+ID C+
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCR 401
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + + + P FS++ + A+ + G++ + T SIL+
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G++ A ++G + +G PN +I NT++ G C KG + A + + QG +
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK 421
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D ++Y LI C+ G+ A + + +++ P+V Y+ +I + +D+
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDI 481
Query: 269 YSEM 272
EM
Sbjct: 482 LKEM 485
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Query: 134 HQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLK 193
ME +G++PD + + LI +C LG++ +A + + +G P+ N L+ G K
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 194 GMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMY 249
+ + ++ G + VSY TLIN LCK A + R +E P V +Y
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIY 532
Query: 250 STIIDSLCKVKLVSDAYDLYSEMVAGEFHLML 281
+ +ID C + DA+ EM+ L L
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL 564
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 114 SMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILK 173
S++L +L K A + + KG+ P+ V + +I+ YC G L A + + K
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 174 RGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRA 233
+G +P+ + N L++ C G ++ A + + + +G +Y LI G + +
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 234 ALRLLRQIEG----PNVIMYSTIIDSLCK 258
+L+++E PNV+ Y T+I+ LCK
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Query: 95 VSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINC 154
++ F +L+ PS + + + +K+ + L ++M+ I P + ++LI+
Sbjct: 164 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDG 223
Query: 155 YCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLD 214
C ++ A + +L R P+ I NTL+ G C G +++ + + + A
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 215 EVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYS 270
+++ TL+ GL K G A +L++++ P+ +S + D + A +Y
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE 343
Query: 271 EMV 273
V
Sbjct: 344 TAV 346
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P + ++M++ A S +M KGI ++VT + LI+ G+L+ A
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ I ++G +P+ N+L+ G G VQR + ++++ G + +Y LI+ LC
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LC 644
Query: 227 KTGDTRAALRLLRQIEG-----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
T+ + L ++ G P++++Y+ ++ + A++L +M+
Sbjct: 645 ----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 42/208 (20%)
Query: 107 TPSII-EFSMILTSLL--KMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTS 163
+PS+ +FS +L S+L + K S A L + +GI P + ++L++ Q
Sbjct: 103 SPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRV 162
Query: 164 AFSVMGNILKRGYQPNT-----------------------------------IILNTLMK 188
+V NIL+ ++P+ I N L+
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 189 GLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----P 244
GLC + A + D+++A+ ++Y TLI+G CK G+ + ++ +++ P
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 245 NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
++I ++T++ L K +V DA ++ EM
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEM 310
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 92/223 (41%), Gaps = 37/223 (16%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F +L+ +++ ++ ++ L S A L ++ KG++PD+ T + LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 153 NCYCHLGQLTSAFSVMGNILKRG-------------------------------YQPNTI 181
+ Y G + ++ + + G +P+ +
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLL 666
Query: 182 ILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTG---DTRAALRLL 238
+ N ++ + G +++A ++ + LD+ +Y +LI G K G + R+ + +
Sbjct: 667 VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 726
Query: 239 --RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHL 279
R++E P Y+ I+ C+VK AY Y EM F L
Sbjct: 727 NAREME-PEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLL 768
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+++ +S+++T+L + A++L M+ KG+ PD + LI +C G+L A
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ G P+ + NT++ LC G +A+E + G + SY T+ + L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFH 278
+GD AL ++ ++ P+ I Y+++I LC+ +V +A++L +M + EFH
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA +R+ +P + +++++ SL A+ + +Q+ +P ++T +ILI
Sbjct: 176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
G + A +M +L RG +P+ NT+++G+C +GMV RA E ++ +G
Sbjct: 236 EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE 295
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D +SY L+ L G +L+ ++ PNV+ YS +I +LC+ + +A +L
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
+L+ P + ++ ++ KM A + +M K PD VT +I+I C G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
+L A V+ +L QP I L++ L+G V A++ D+++++G + D +Y
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 220 TLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
T+I G+CK G A ++R +E P+VI Y+ ++ +L + L ++M +
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ + +L P + ++ I+ + K A + +ELKG PD+++ +IL+
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G+ +M + PN + + L+ LC G ++ AM + +G
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
D SY LI C+ G A+ L + +G P+++ Y+T++ +LCK A ++
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 269 YSEM 272
+ ++
Sbjct: 426 FGKL 429
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP + ++ + + AI M G PDIV + ++ C G+ A
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ G + + G PN+ NT+ L G RA+ ++++ G DE++Y ++I+ LC
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 227 KTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
+ G A LL + P+V+ Y+ ++ CK + DA ++ MV
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 118 TSLLKMKH-------YSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
T +LK+ H Y ++ L M KG PD++ + LI + L + A VM
Sbjct: 90 TQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-E 148
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
IL++ QP+ N L+ G C + A D + ++ F D V+Y +I LC G
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 231 TRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
AL++L Q+ P VI Y+ +I++ V +A L EM++
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 72/148 (48%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F +L ++ +P+ ++ + ++L A+ + +M GI PD +T + +I+
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C C G + AF ++ ++ + P+ + N ++ G C ++ A+ + +V G R
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI 241
+E +Y LI G+ G A+ L +
Sbjct: 542 NETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F ++ P I+ ++ +L +L K A+ + ++ G P+ + + + +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
G A ++ ++ G P+ I N+++ LC +GMV A E D+ + F
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
V+Y ++ G CK A+ +L + G PN Y+ +I+ + ++A +L
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 566
Query: 270 SEMV 273
+++V
Sbjct: 567 NDLV 570
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A FNR+++ P + + +L SL KH + A + + GI P T SIL+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + + A V +L+R + + N L+ LC G V + ++ G +
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D S+A I+ C GD +A ++L +++ PNV ++ II +LCK + V DAY L
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 269 YSEMV 273
EM+
Sbjct: 336 LDEMI 340
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 88/189 (46%), Gaps = 4/189 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F+ +L+ + ++ ++ +L +L K + +M G++PD + +I I+
Sbjct: 227 ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G + SA+ V+ + + PN N ++K LC V A D+++ +G
Sbjct: 287 AYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP 346
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y +++ C + A +LL +++ P+ Y+ ++ L ++ A +++
Sbjct: 347 DTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIW 406
Query: 270 SEMVAGEFH 278
M +F+
Sbjct: 407 EGMSERKFY 415
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 1/164 (0%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A +R+ + P++ F+ I+ +L K + A L +M KG PD T + ++
Sbjct: 297 AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMA 356
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C ++ A ++ + + P+ N ++K L G RA E + + + F
Sbjct: 357 YHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYP 416
Query: 214 DEVSYATLINGLC-KTGDTRAALRLLRQIEGPNVIMYSTIIDSL 256
+Y +I+GL K G A R + + YST ++ L
Sbjct: 417 TVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + F+ ++ P++ +++++ L + A + +M I P ++T + LIN
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G++ AF ++ + KR +PN N LM+GLC G +A+ ++ G
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCK 258
D VSY LI+GLC+ G A +LL + P+ + ++ II++ CK
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 39/218 (17%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV R+L +P I+ +++++ L + H +TA L M I PD +T + +IN
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHD--------- 204
+C G+ A + +G +L++G + + TL+ G+C G + A+ +
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 205 ---------DVVAQGFRLDE-----------------VSYATLINGLCKTGDTRAALRLL 238
D++++G ++ E V+Y TL++GL ++GD + R+L
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 239 R--QIEG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
++ G PNV Y+ II+ LC+ V +A L S M
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 93 DAVSFFNRL-LQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
DA+ F+ + ++ P+ + +S+++ L ++ A L QM KG +P T ++L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I C G + AF++ ++ RG +PN L+ GLC G ++ A +V
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKV 259
++Y LING CK G A LL +E PNV ++ +++ LC+V
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
Query: 143 PDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEF 202
P+ V+ SILI+ C +G+L AF + + ++G QP+T L+K LC +G++ +A
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 203 HDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCK 258
D+++ +G + + +Y LI+GLC+ G A + R++ P+VI Y+ +I+ CK
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 259 VKLVSDAYDLYSEM 272
V A++L + M
Sbjct: 384 DGRVVPAFELLTVM 397
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P++ F+ ++ L ++ A+ L +M G+ PDIV+ ++LI+ C G + +A+ +
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ +P+ + ++ C +G A F ++ +G LDEV+ TLI+G+CK
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Query: 228 TGDTRAALRLLRQIEGPNVIM----YSTIIDSL---CKVK 260
G TR AL +L + ++ + I+D L CKVK
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 4/162 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS+I ++ ++ K A L ME + +P++ T + L+ C +G+ A +
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ +L G P+ + N L+ GLC +G + A + + D +++ +IN CK
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 228 TGDTRAALR----LLRQIEGPNVIMYSTIIDSLCKVKLVSDA 265
G A +LR+ + + +T+ID +CKV DA
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 69/133 (51%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ ++ ++ ++ PS++ ++ ++ L++ + + + M+L G P++ +I+I
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G++ A ++ + G PN + ++KG G + RA+E +V +G+
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683
Query: 213 LDEVSYATLINGL 225
L++ Y++L+ G
Sbjct: 684 LNDRIYSSLLQGF 696
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+S +L SL K+ A +ME G ++ ++N C G +A M IL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL--DEVSYATLINGLCKTGD 230
K G+ ++ I +L+ G C ++ A++ DV+++ + VSY+ LI+GLC+ G
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 231 TRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
A L Q+ +G P+ Y+ +I +LC L+ A++L+ EM+
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 91/168 (54%), Gaps = 1/168 (0%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ +++ ++ +S+++ L K + A+ L +M +G+ P+++T + +I
Sbjct: 260 DALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAII 319
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C +G+L AF + IL G + + + TL+ G+C KG + RA D+ +G +
Sbjct: 320 RGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVK 260
++Y T+INGLC G A + + + G +VI YST++DS KV+
Sbjct: 380 PSILTYNTVINGLCMAGRVSEADEVSKGVVG-DVITYSTLLDSYIKVQ 426
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Query: 144 DIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFH 203
D++ +I+IN C G L A ++ RG NTI N+L+ GLC +G + A+
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 204 DDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKV 259
D + G EV+Y LI+ LCK G A +LL + +G PN+I+Y++I+D CK+
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 260 KLVSDAYDLYSEMVAG 275
DA + S + G
Sbjct: 774 GQTEDAMRVVSRKMMG 789
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
+I++++I+ L K A++L + +G+ + +T + LIN C G L A +
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
++ G P+ + L+ LC +G+ A + D +V++G + + Y ++++G CK
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 229 GDTRAALRLL-RQIEG---PNVIMYSTIIDSLCKVKLVSDAYDLYSEM----VAGEFHLM 280
G T A+R++ R++ G P+ S++I CK + +A +++E ++ +F
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 281 LSLI 284
L LI
Sbjct: 834 LFLI 837
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A S + Q PSI+ ++ ++ L S A +S KG+ D++T S L++
Sbjct: 366 AFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVS-----KGVVGDVITYSTLLD 420
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y + + + + L+ + ++ N L+K L G A + +
Sbjct: 421 SYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTP 480
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNV---IMYSTIIDSLCKVKLVSDAYDLYS 270
D +YAT+I G CKTG AL + ++ +V + Y+ IID+LCK ++ A ++
Sbjct: 481 DTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLI 540
Query: 271 EMVAGEFHL 279
E+ +L
Sbjct: 541 ELWEKGLYL 549
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F+ L + PS + + +++ +L K + A L M KG+ P+I+ + ++
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAM----EFHDDVVA 208
+ YC LGQ A V+ + P+ +++++KG C KG ++ A+ EF D ++
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Query: 209 QGFRLDEVSYATLINGLCKTGDTRAALRLLRQI 241
F + LI G C G A LLR++
Sbjct: 828 ADF----FGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 4/174 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
T + I ++ ++ L + A+ L +E G+ P VT ILI+ C G A
Sbjct: 687 TLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEK 746
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ +++ +G PN II N+++ G C G + AM + D + +++I G C
Sbjct: 747 LLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 227 KTGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
K GD AL + + + N+ + +I C + +A L EM+ E
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSE 860
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+++ ++ ++++L ++ L ++E +G D V S I+ Y G L A
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
++++G + + + L+ GL +G V+ A+ ++ +G + ++Y +I GLCK
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 228 TGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLYSEM 272
G A L +I + +Y T+ID +C+ ++ A+ + +M
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
R L+ ++ +++L + L M Y A +L M + PD T + +I YC G
Sbjct: 437 RFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTG 496
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
Q+ A M N L++ + N ++ LC KGM+ A E ++ +G LD +
Sbjct: 497 QIEEALE-MFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSR 555
Query: 220 TLINGLCKTGDTRAALRLLRQIEGPN----VIMYSTIIDSLCKVKLVSDAYDLY 269
TL++ + G + L L+ +E N + M + I LCK A ++Y
Sbjct: 556 TLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVY 609
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F ++ + ++ ++ +L K+ TA + M K I P ++ SIL+
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G L AF V ++ + +P +I N+++KG C G F + ++++GF
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG------PNVIMYSTIIDSLCKVKLVSDAY 266
D +SY TLI G + + A L++++E P+V Y++I+ C+ + +A
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 267 DLYSEMV 273
+ +M+
Sbjct: 678 VVLRKMI 684
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 98/183 (53%), Gaps = 4/183 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F+ + P ++ FS +++ + + A+ + ++ G+ PD V +ILI YC
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G ++ A ++ +L++G + + NT++ GLC + M+ A + +++ + D +
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 218 YATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
LI+G CK G+ + A+ L ++++ +V+ Y+T++D KV + A +++++MV
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 274 AGE 276
+ E
Sbjct: 543 SKE 545
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ +FN + + P + +++++ + S A++L ++M +G D+VT + +++
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C L A + + +R P++ L L+ G C G +Q AME + + RL
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V+Y TL++G K GD A + + P I YS ++++LC +++A+ ++
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 270 SEMVA 274
EM++
Sbjct: 574 DEMIS 578
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ N +LQ ++ ++ IL L K K A L ++M + + PD T +ILI+
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C LG L +A + + ++ + + + NTL+ G G + A E D+V++
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+SY+ L+N LC G A R+ ++ P V++ +++I C+ SD
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 270 SEMVAGEF 277
+M++ F
Sbjct: 609 EKMISEGF 616
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 122 KMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTI 181
KM+ T +S Q++ KG+ PDIVT + LI+ Y G + AF +M + +G+ P
Sbjct: 250 KMEKVGTFLS---QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 182 ILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQI 241
NT++ GLC G +RA E +++ G D +Y +L+ CK GD ++ +
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 242 EGPNVI 247
+V+
Sbjct: 367 RSRDVV 372
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F +L+ +P + +L K + M + + PD+V S +++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ G L A ++ + G P+ +I L++G C KGM+ AM ++++ QG +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V+Y T+++GLCK A +L ++ P+ + +ID CK+ + +A +L+
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 270 SEM 272
+M
Sbjct: 504 QKM 506
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
T SI + ++ SL+++ A + ++ G+ ++ T +I++N C G++ +
Sbjct: 197 TVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGT 256
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ + ++G P+ + NTL+ KG+++ A E + + +GF +Y T+INGLC
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 227 KTGDTRAA----LRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
K G A +LR P+ Y +++ CK V + ++S+M
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A FN + + P ++++ K+ + A+ L +M+ K IR D+VT + L+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + +G + +A + +++ + P I + L+ LC KG + A D+++++ +
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++I G C++G+ L ++ EG P+ I Y+T+I + + +S A+ L
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Query: 269 YSEM 272
+M
Sbjct: 643 VKKM 646
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 39/216 (18%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
+F +++ + P I+ ++ ++++ A L + M KG P + T + +IN
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMV------------------- 196
C G+ A V +L+ G P++ +L+ C KG V
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 197 ----------------QRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL--- 237
+A+ + + V G D V Y LI G C+ G A+ L
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435
Query: 238 -LRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L+Q +V+ Y+TI+ LCK K++ +A L++EM
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
F +++ + ++ + A + KG I + LI +G + A+ V I
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ G N LN ++ LC G +++ F V +G D V+Y TLI+ G
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 233 AALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
A L+ + G P V Y+T+I+ LCK A ++++EM+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK--GIRPDIVTSSI 150
D SF +++ P I ++ ++ ++ ++ S A L +ME + G+ PD+ T +
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 151 LINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
+++ +C Q+ A V+ +++RG P+ ++ G + + A HD+++ +G
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 211 FRLDE 215
F D+
Sbjct: 723 FSPDD 727
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A SFF+ M P+ + F++++ L + A + +M ++P +VT + LI
Sbjct: 170 AKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIG 229
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C + A S++ +++K+ +PN + LMKGLC KG A + D+ +G +
Sbjct: 230 FLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKP 289
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
V+Y L++ L K G A LL +++ P+V++Y+ +++ LC V +AY +
Sbjct: 290 GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVL 349
Query: 270 SEM 272
+EM
Sbjct: 350 TEM 352
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F+ +L+M PS++ ++ ++ L + A SL M K IRP+ VT +L+
Sbjct: 205 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 264
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G+ A +M ++ RG +P + LM L +G + A ++ + +
Sbjct: 265 GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 324
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V Y L+N LC A R+L +++ PN Y +ID C+++ ++
Sbjct: 325 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVL 384
Query: 270 SEMVA 274
+ M+A
Sbjct: 385 NAMLA 389
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F+++ +I + ++ L+ A S + +RP+ V+ +ILI
Sbjct: 135 AIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIK 194
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ +A V +L+ QP+ + N+L+ LC + +A +D++ + R
Sbjct: 195 GFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRP 254
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ V++ L+ GLC G+ A +L+ +E P ++ Y ++ L K + +A L
Sbjct: 255 NAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLL 314
Query: 270 SEM 272
EM
Sbjct: 315 GEM 317
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + +++ L + A L +M K P +VT + LIN C + A
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + +G +PN ++LM GLC G +AME + ++A+G R + V+Y TLI GLCK
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAG 275
+ A+ LL ++ P+ +Y +I C + +A + EM+ G
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG 361
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 94/184 (51%), Gaps = 5/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTA-ISLSHQMELKGIRPDIVTSSILI 152
A F+ + ++ P++ ++++ +L + A + + +M +G PD T LI
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G++ A + ++++ P + +L+ GLC V AM + +++ ++G
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ +Y++L++GLCK G + A+ L + PN++ Y+T+I LCK + + +A +L
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
Query: 269 YSEM 272
M
Sbjct: 320 LDRM 323
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F +++ P+++ ++ ++ L K+ A+ +M+ KGI P++ T S L+
Sbjct: 210 EAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLM 269
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+ A + ++ RG +PN + TL+ GLC + +Q A+E D + QG +
Sbjct: 270 DGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLK 329
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI 241
D Y +I+G C R A L ++
Sbjct: 330 PDAGLYGKVISGFCAISKFREAANFLDEM 358
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 10/191 (5%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ + + P++ +S ++ L K A+ L M +G RP++VT + LI
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C ++ A ++ + +G +P+ + ++ G C + A F D+++ G
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT 364
Query: 213 LDEVSY-------ATLINGLCKTGDTRA-ALRLLRQIEGPNVIMYS--TIIDSLCKVKLV 262
+ +++ ++ GLC +RA L L + G +V + + +++ LCK
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEF 424
Query: 263 SDAYDLYSEMV 273
A L E+V
Sbjct: 425 QKAVQLVDEIV 435
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
SII S++L+ L K A+SL +QM+ G+ PD+V SI+I+ C LG+ A +
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
+ + PN+ L+ GLC KGM+ A D +++ G LD V Y +I+G K+
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 229 GDTRAALRLLR-QIE---GPNVIMYSTIIDSLCKVKLVSDA 265
G AL L + IE P+V ++++I CK + +++A
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV F PS++ F+ I++ K+ A S + G+ P + + +ILI
Sbjct: 205 DAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILI 264
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C +G + A + ++ K G +P+++ N L KG L GM+ A E D++ +G
Sbjct: 265 NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS 324
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
D ++Y L+ G C+ G+ L LL R E ++I S ++ LCK + +A
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 268 LYSEMVA 274
L+++M A
Sbjct: 385 LFNQMKA 391
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+S FN++ +P ++ +S+++ L K+ + A+ L +M K I P+ T L+
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G L A S++ +++ G + ++ N ++ G G ++ A+E V+ G
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
++ +LI G CKT + A ++L I+ P+V+ Y+T++D+ +L
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 269 YSEMVA 274
EM A
Sbjct: 561 RREMKA 566
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+S ++ L + + A+ E K I P +V+ + +++ YC LG + A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
K G P+ N L+ GLCL G + A+E D+ G D V+Y L G G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 233 AALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHL 279
A ++R + +G P+VI Y+ ++ C++ + L +M++ F L
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 135 QMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKG 194
ME +GI PD +T + +I C + L+ AF + + R ++ N L+ LC+ G
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Query: 195 MVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQI--EGPNVIM--YS 250
+++A F + Q L + +Y TLI C GD A++L Q+ G NV + YS
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729
Query: 251 TIIDSLCKVKLVS 263
+I+ LC+ L++
Sbjct: 730 AVINRLCRRHLMN 742
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F +++ TPS+ F+ ++ K ++ + A + ++L G+ P +V+ + L+
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCL------------KGMVQRAM 200
+ Y + G S + + G P + + + KGLC + + ++
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
Query: 201 EFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNV----IMYSTIIDSL 256
+ D+ ++G D+++Y T+I LC+ A L ++ N+ Y+ +IDSL
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665
Query: 257 C 257
C
Sbjct: 666 C 666
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A S + L+ T I+ +++++ K A+ L + GI P + T + LI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
YC + A ++ I G P+ + TLM G + E ++ A+G
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLR--------------QIEG--PNVIMYSTIIDSL 256
V+Y+ + GLC+ +LR + EG P+ I Y+TII L
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 257 CKVKLVSDAY 266
C+VK +S A+
Sbjct: 631 CRVKHLSGAF 640
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I ++ I+ L ++KH S A M+ + + T +ILI+ C G + A S
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ ++ + TL+K C+KG + A++ ++ +GF + Y+ +IN LC+
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
SII S++L+ L K A+SL +QM+ G+ PD+V SI+I+ C LG+ A +
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
+ + PN+ L+ GLC KGM+ A D +++ G LD V Y +I+G K+
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 229 GDTRAALRLLR-QIE---GPNVIMYSTIIDSLCKVKLVSDA 265
G AL L + IE P+V ++++I CK + +++A
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV F PS++ F+ I++ K+ A S + G+ P + + +ILI
Sbjct: 205 DAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILI 264
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C +G + A + ++ K G +P+++ N L KG L GM+ A E D++ +G
Sbjct: 265 NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS 324
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
D ++Y L+ G C+ G+ L LL R E ++I S ++ LCK + +A
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 268 LYSEMVA 274
L+++M A
Sbjct: 385 LFNQMKA 391
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+S FN++ +P ++ +S+++ L K+ + A+ L +M K I P+ T L+
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G L A S++ +++ G + ++ N ++ G G ++ A+E V+ G
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
++ +LI G CKT + A ++L I+ P+V+ Y+T++D+ +L
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 269 YSEMVA 274
EM A
Sbjct: 561 RREMKA 566
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+S ++ L + + A+ E K I P +V+ + +++ YC LG + A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
K G P+ N L+ GLCL G + A+E D+ G D V+Y L G G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 233 AALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHL 279
A ++R + +G P+VI Y+ ++ C++ + L +M++ F L
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 135 QMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKG 194
ME +GI PD +T + +I C + L+ AF + + R ++ N L+ LC+ G
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Query: 195 MVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQI--EGPNVIM--YS 250
+++A F + Q L + +Y TLI C GD A++L Q+ G NV + YS
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729
Query: 251 TIIDSLCKVKLVS 263
+I+ LC+ L++
Sbjct: 730 AVINRLCRRHLMN 742
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F +++ TPS+ F+ ++ K ++ + A + ++L G+ P +V+ + L+
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCL------------KGMVQRAM 200
+ Y + G S + + G P + + + KGLC + + ++
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
Query: 201 EFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNV----IMYSTIIDSL 256
+ D+ ++G D+++Y T+I LC+ A L ++ N+ Y+ +IDSL
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665
Query: 257 C 257
C
Sbjct: 666 C 666
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A S + L+ T I+ +++++ K A+ L + GI P + T + LI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
YC + A ++ I G P+ + TLM G + E ++ A+G
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLR--------------QIEG--PNVIMYSTIIDSL 256
V+Y+ + GLC+ +LR + EG P+ I Y+TII L
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 257 CKVKLVSDAY 266
C+VK +S A+
Sbjct: 631 CRVKHLSGAF 640
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I ++ I+ L ++KH S A M+ + + T +ILI+ C G + A S
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ ++ + TL+K C+KG + A++ ++ +GF + Y+ +IN LC+
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 94/175 (53%), Gaps = 6/175 (3%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL-INCYCHLGQLTSAF 165
TPS I + +L +++ A ++ +M ++G+ PD + ++ I C+ G++ A
Sbjct: 179 TPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEAD 237
Query: 166 SVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGL 225
+ +++RG+ P+ ++ LC G+V RA+ + ++ GF+ + +++ +LI+GL
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297
Query: 226 CKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
CK G + A +L ++ PNV ++ +ID LCK A+ L+ ++V +
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 139 KGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQR 198
+G PD T ++++ C G + A ++ G++PN I +L+ GLC KG +++
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 305
Query: 199 AMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQI-----EGPNVIMYSTII 253
A E +++V G++ + ++ LI+GLCK G T A RL ++ PNV Y+++I
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMI 365
Query: 254 DSLCKVKLVSDAYDLYSEM 272
CK ++ A L+S M
Sbjct: 366 GGYCKEDKLNRAEMLFSRM 384
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 5/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + ++Q P ++ILT+L + + AI +M G +P+++ + LI
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAME-FHDDVVAQGF 211
+ C G + AF ++ +++ G++PN L+ GLC +G ++A F V + +
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY 354
Query: 212 RLDEVSYATLINGLCKTGD-TRAALRLLRQIEG---PNVIMYSTIIDSLCKVKLVSDAYD 267
+ + +Y ++I G CK RA + R E PNV Y+T+I+ CK AY+
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414
Query: 268 LYSEM 272
L + M
Sbjct: 415 LMNLM 419
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+I ++ + SL K A L ++ G+ D VT +ILI C + A +
Sbjct: 426 PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAF 485
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ K G++ + + N L+ C + ++ + VV+ G + +Y ++I+ CK
Sbjct: 486 FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCK 545
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
GD AL+ ++ P+ Y ++I LCK +V +A LY M+
Sbjct: 546 EGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMI 595
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P++ ++ ++ K + A L +M+ +G+ P++ T + LIN +C G A+ +
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
M + G+ PN N + LC K A E + + G D V+Y LI CK
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475
Query: 228 TGDTRAAL----RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
D AL R+ + ++ + + +I + C+ K + ++ L+ +V+
Sbjct: 476 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVS 526
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 1/184 (0%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++FF R+ + + ++++ + + K + L + G+ P T + +I+
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 541
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
CYC G + A N+ + G P++ +L+ GLC K MV A + ++ ++ +G
Sbjct: 542 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI-MYSTIIDSLCKVKLVSDAYDLYSEM 272
EV+ TL CK D+ A+ LL ++ I T++ LC K V A + ++
Sbjct: 602 PEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKL 661
Query: 273 VAGE 276
+ +
Sbjct: 662 LEKD 665
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRG 175
+L + ++ + A+ + M+ +G+ P +T + ++ LG + A +V + RG
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 176 YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL 235
P++ ++ G G +Q A + ++ +GF D + ++ LC+ G A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 236 RLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
R++ PN+I ++++ID LCK + A+++ EMV
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 42/231 (18%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ +F +++ + P++I F+ ++ L K A + +M G +P++ T + LI+
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 154 CYCHLGQLTSAF--------------------SVMGNILK----------------RGYQ 177
C G AF S++G K +G
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 178 PNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
PN TL+ G C G RA E + + +GF + +Y I+ LCK A L
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 238 LRQ-----IEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHLMLSL 283
L + +E V Y+ +I CK ++ A + M F + L
Sbjct: 451 LNKAFSCGLEADGVT-YTILIQEQCKQNDINQALAFFCRMNKTGFEADMRL 500
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F+ R+ + I ++ ++ L K A+ L ++M GI PDIVT S LIN
Sbjct: 427 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C +G+ +A ++ I + G PN II +TL+ C G ++ A+ ++ ++ +G
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D ++ L+ LCK G A +R + PN + + +I+ A+ ++
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 270 SEM 272
EM
Sbjct: 607 DEM 609
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 93 DAVSFFNRLLQMHP-TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
D++ F RL+ ++ PS+ + IL S++K + S +M + I PD+ T +IL
Sbjct: 181 DSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNIL 239
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
IN C G + +M + K GY P + NT++ C KG + A+E D + ++G
Sbjct: 240 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 299
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
D +Y LI+ LC++ LLR + PN + Y+T+I+ V A
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 359
Query: 268 LYSEMVA 274
L +EM++
Sbjct: 360 LLNEMLS 366
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A N +L +P+ + F+ ++ + ++ A+ + + ME KG+ P V+ +L++
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C + A + + G I ++ GLC G + A+ +++ G
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 214 DEVSYATLINGLCKTGDTRAA----LRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V+Y+ LING CK G + A R+ R PN I+YST+I + C++ + +A +Y
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Query: 270 SEMV 273
M+
Sbjct: 537 EAMI 540
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ + ++ T F++++TSL K + A M GI P+ V+ LI
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N Y + G+ AFSV + K G+ P +L+KGLC G ++ A +F + A
Sbjct: 591 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 650
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCK 258
+D V Y TL+ +CK+G+ A+ L ++ P+ Y+++I LC+
Sbjct: 651 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
P+I+ ++ +L K + AI L M+ KG+ D+ T ++LI+ C ++ +
Sbjct: 265 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 324
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ ++ KR PN + NTL+ G +G V A + +++++ G + V++ LI+G
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 227 KTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G+ + AL++ +E P+ + Y ++D LCK A Y M
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
R+ ++ +P+ I +S ++ + +M AI + M L+G D T ++L+ C G
Sbjct: 503 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 562
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
++ A M + G PNT+ + L+ G G +A D++ G +Y
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622
Query: 220 TLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+L+ GLCK G R A + L+ + + +MY+T++ ++CK ++ A L+ EMV
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 680
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ + + + ++M++ L + + L M + I P+ VT + LIN
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ + G++ A ++ +L G PN + N L+ G +G + A++ + A+G
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 214 DEVSYATLINGLCKTGDTRAA----LRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
EVSY L++GLCK + A +R+ R I Y+ +ID LCK + +A L
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 270 SEM 272
+EM
Sbjct: 467 NEM 469
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A S F+ + ++ P+ + +L L K H A + D V + L+
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G L A S+ G +++R P++ +L+ GLC KG A+ F + A+G L
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 214 -DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
++V Y ++G+ K G +A + Q++ P+++ + +ID ++ + DL
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 269 YSEM 272
EM
Sbjct: 782 LPEM 785
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 4/180 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F + TPS + + ++L L K + A +M+ G+ +T + +I
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G L A ++ + K G P+ + + L+ G C G + A E + G
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ + Y+TLI C+ G + A+R+ +EG + ++ ++ SLCK V++A +
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 105 HPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSA 164
+ PS+ + +++ L+ ++ + M L G P + T + ++ G+ S
Sbjct: 160 NSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217
Query: 165 FSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLING 224
+S + +LKR P+ N L+ LC +G +++ + G+ V+Y T+++
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 225 LCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
CK G +AA+ LL ++ +V Y+ +I LC+ ++ Y L +M
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 101 LLQMHPTPSIIE---FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
L +H P+ ++ ++ +LT++ K + + A+SL +M + I PD T + LI+ C
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Query: 158 LGQLTSAF------SVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
G+ A GN+L PN ++ + G+ G + + F + + G
Sbjct: 701 KGKTVIAILFAKEAEARGNVL-----PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 755
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
D V+ +I+G + G LL Q GPN+ Y+ ++ K K VS ++
Sbjct: 756 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 815
Query: 268 LYSEMV 273
LY ++
Sbjct: 816 LYRSII 821
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + ++ + + K + I QM+ G PDIVT++ +I+ Y +G++ +
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + + PN N L+ G + V + + ++ G D+++ +L+ G+C+
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 228 TGDTRAALRLLRQI--EGPNVIMYS--TIIDSLCKVKLVSDAYDLYSEMVA 274
+ L++L+ G V Y+ +I C ++ A+DL M +
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P ++ ++ L ++ TA + +M I P V S ++ G+ A
Sbjct: 931 SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 990
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ +LK P TLM C G V A+E + G +LD VSY LI GLC
Sbjct: 991 LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1050
Query: 227 KTGDTRAALRLLRQIEGPNVIMYSTIIDSL 256
GD A L +++G + +T +L
Sbjct: 1051 AKGDMALAFELYEEMKGDGFLANATTYKAL 1080
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 27/194 (13%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PSI +++++ L K+ S A ++ M+ G+ PD VT L++ YC +G++ +A S+
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ +++ PN N L+ L G + A E + +G+ LD V+ +++GLC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 228 TGDTRAALRLLR--QIEG-------------------------PNVIMYSTIIDSLCKVK 260
+G+ A+ +++ ++ G P++I YST+++ LCK
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 261 LVSDAYDLYSEMVA 274
++A +L++EM+
Sbjct: 539 RFAEAKNLFAEMMG 552
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS+ ++++L S +K + L M L GI P T ++LI C + +A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++G +PN L++G C G+ + +E + + + G ++V Y T+++ C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 228 TGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
G + +++ ++ EG P+++ +++ I +LCK V DA ++S+M E+
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 99 NRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHL 158
+ L++ + P +I +S +L L K ++ A +L +M + ++PD V +I I+ +C
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 159 GQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSY 218
G+++SAF V+ ++ K+G + N+L+ GL +K + D++ +G + +Y
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 219 ATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
T I LC+ A LL ++ PNV + +I++ CKV A +++ V+
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS 692
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 19/259 (7%)
Query: 21 SMVVKPSTFGMMLGVVGVVSRAHHISTKIAAMSSSSLFRLTRFPFLSNPTFLLXXXXXXX 80
S ++ + +L VV + ++++HI A L R +RFP + P+ L
Sbjct: 67 SSSIQKTKLSSLLSVVSIFAKSNHIDK---AFPQFQLVR-SRFP-ENKPSVYLYNLLLES 121
Query: 81 XXXXXXXXXXXXDAVSF-FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK 139
+ VS+ + ++ P F++++ +L A L +M K
Sbjct: 122 CIKERRV-----EFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEK 176
Query: 140 GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRA 199
G +P+ T IL+ YC G ++ + G PN +I NT++ C +G +
Sbjct: 177 GCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDS 236
Query: 200 MEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE--------GPNVIMYST 251
+ + + +G D V++ + I+ LCK G A R+ +E PN I Y+
Sbjct: 237 EKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNL 296
Query: 252 IIDSLCKVKLVSDAYDLYS 270
++ CKV L+ DA L+
Sbjct: 297 MLKGFCKVGLLEDAKTLFE 315
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 62/242 (25%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A S +++ + P+ +++L SL KM S A L +M KG D VT +I+++
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 154 CYCHLGQLTSAFSV--------------MGN---------ILKRGYQPNTIILNTLMKGL 190
C G+L A + +GN +++ P+ I +TL+ GL
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 191 CLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE-------- 242
C G A +++ + + D V+Y I+ CK G +A R+L+ +E
Sbjct: 535 CKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSL 594
Query: 243 -------------------------------GPNVIMYSTIIDSLCKVKLVSDAYDLYSE 271
PN+ Y+T I LC+ + V DA +L E
Sbjct: 595 ETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Query: 272 MV 273
M+
Sbjct: 655 MM 656
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 43/215 (20%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F+ + + P+ F +++ K + L + ME G+ P+ V + +++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF-- 211
+C G+ + ++ + + G P+ + N+ + LC +G V A D+ +
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 212 --RLDEVSYATLINGLCKTG---------------DTRAALR------------------ 236
R + ++Y ++ G CK G D A+L+
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 237 --LLRQIE----GPNVIMYSTIIDSLCKVKLVSDA 265
+L+Q+ GP++ Y+ ++D LCK+ ++SDA
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 45/210 (21%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + ++ I++S + + + +M +G+ PDIVT + I+ C G++ A +
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274
Query: 168 MGNILKRGY----QPNTIILNTLMKGLCLKGMVQRA------MEFHDDVVA--------- 208
++ Y +PN+I N ++KG C G+++ A + +DD+ +
Sbjct: 275 FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQ 334
Query: 209 --------------------QGFRLDEVSYATLINGLCKTG---DTRAALRLLRQIEG-- 243
+G SY L++GLCK G D + + L+++ G
Sbjct: 335 GLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR-NGVC 393
Query: 244 PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
P+ + Y ++ C V V A L EM+
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYS-------TAISLSHQMELKGIRPDI 145
DA + + ++Q + P++ F ++ + K+ + TA+S+ Q E G+
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE--GLY--- 701
Query: 146 VTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDD 205
S++ N GQL A ++ +L RG++ T + L++ LC K ++ A
Sbjct: 702 ---SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 206 VVAQGFRLDEVSYATLINGLCKTGDTRAA 234
++ +G+ D + +I+GL K G+ + A
Sbjct: 759 MIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 100 RLLQMHPT----PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
+LLQ+ T P+ + ++ +L +L K A SL +M+ P+ VT +ILI+ Y
Sbjct: 203 KLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAY 258
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
C+ +L + ++ G+ P+ + + +M+ LC +G V A+E + V ++G ++D
Sbjct: 259 CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV 318
Query: 216 VSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSE 271
V+ TL+ G C G R A R ++E PNV Y+ +I C V ++ A D +++
Sbjct: 319 VACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFND 378
Query: 272 M 272
M
Sbjct: 379 M 379
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ + ++ L S A+ + ++E KG + D+V + L+ YC LG++ A
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++GY PN N L+ G C GM+ A++ +D+ R + ++ TLI GL
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 228 TGDTRAALRLLRQIE------GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G T L++L ++ G + Y+ +I K DA + +M
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F ++ ++ P ++ S L SL + + QM +G P I+ S LI
Sbjct: 443 DALEFLLKMEKLFPRA--VDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLI 500
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y G++ + ++ +++ RGY P + N ++ G C + V ++F +D+ +G
Sbjct: 501 HRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCV 560
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-RQIEG---PNVIMYSTII 253
D SY L+ LC GD + A L R +E P+ M+S+++
Sbjct: 561 PDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS+ F+ IL L+K + +M GI D+ T IL+ ++ F +
Sbjct: 145 PSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKL 204
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G PN ++ NTL+ LC G V RA ++ ++V++ LI+ C
Sbjct: 205 LQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP----NDVTFNILISAYCN 260
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
++ LL + P+V+ + +++ LC VS+A ++
Sbjct: 261 EQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F+ + + +P+++ F+ ++ K A+SL +M + ++VT + LI+
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C G++ A + +++ +PN+++ T++ G +G AM+F ++ QG RL
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y +I+GLC G + A ++ +E P++++++T++++ K + A ++Y
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 270 SEMVAGEFH 278
+++ F
Sbjct: 362 HKLIERGFE 370
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F ++L I + +I++ L A + ME + PD+V + ++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N Y G++ +A ++ +++RG++P+ + L+T++ G+ G + A+ + + +
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA-- 401
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
++V Y LI+ LCK GD RL +I P+ MY++ I LCK + DA+ L
Sbjct: 402 -NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 269 YSEMVAGEFHLMLSLIMH 286
+ MV + L+L L+ +
Sbjct: 461 KTRMV--QEGLLLDLLAY 476
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P+++ +S + + K A+ H M+ + P++VT + LI+ YC G L A S
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ + + N + L+ G C KG +QRA E + +V + + Y T+I+G
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 227 KTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ GD+ A++ L ++ ++ Y II LC + +A ++ +M
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A ++R+++ P+ + ++ I+ + A+ +M +G+R DI ++I+
Sbjct: 252 AEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS 311
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G+L A ++ ++ K P+ +I T+M G ++ A+ + ++ +GF
Sbjct: 312 GLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCK 258
D V+ +T+I+G+ K G A+ + IE N +MY+ +ID+LCK
Sbjct: 372 DVVALSTMIDGIAKNGQLHEAI-VYFCIEKANDVMYTVLIDALCK 415
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I+ F+ + KMK M LK P++VT S I+ +C G+L A
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
++ + PN + L+ G C G ++ A+ + ++ L+ V+Y LI+G CK
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 228 TGDTRAALRLL-RQIEG---PNVIMYSTIIDSL 256
G+ + A + R +E PN ++Y+TIID
Sbjct: 246 KGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 8/186 (4%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
++ F L+ TP F+ +++ + K+ A + H M G PD+++ + LI+
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 154 CYCHLGQLTSAFSVMGNI-LKRGY--QPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
+C G + SA V+ ++ G+ +P+ + N+L G M+ + V+ +
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYM-GVMLKC 158
Query: 211 FRLDEVSYATLINGLCKTGDTRAALR----LLRQIEGPNVIMYSTIIDSLCKVKLVSDAY 266
+ V+Y+T I+ CK+G+ + AL+ + R PNV+ ++ +ID CK + A
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 267 DLYSEM 272
LY EM
Sbjct: 219 SLYKEM 224
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 77/198 (38%), Gaps = 36/198 (18%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSS------------------ 149
P ++ F+ ++ + K A+++ H++ +G PD+V S
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVY 395
Query: 150 ------------ILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQ 197
+LI+ C G + I + G P+ + + + GLC +G +
Sbjct: 396 FCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455
Query: 198 RAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLC 257
A + +V +G LD ++Y TLI GL G A ++ ++ + S + D L
Sbjct: 456 DAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515
Query: 258 KVKLVSDAYDLYSEMVAG 275
+ AY+ M A
Sbjct: 516 R------AYEKEGNMAAA 527
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 19/127 (14%)
Query: 151 LINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ- 209
LIN C G L+ F + ++ RGY P+ N+++ +C G V+ F +D+V
Sbjct: 31 LINSNC--GILSLKF--LAYLVSRGYTPHRSSFNSVVSFVCKLGQVK----FAEDIVHSM 82
Query: 210 ---GFRLDEVSYATLINGLCKTGDTRAA---LRLLRQIEG----PNVIMYSTIIDSLCKV 259
G D +SY +LI+G C+ GD R+A L LR G P+++ ++++ + K+
Sbjct: 83 PRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKM 142
Query: 260 KLVSDAY 266
K++ + +
Sbjct: 143 KMLDEVF 149
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 95/188 (50%), Gaps = 5/188 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A SFF+ L P +I ++ ++ + S A + +M+L GI P++ T SI+I
Sbjct: 239 EAQSFFDSLKDRF-EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVI 297
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C GQ++ A V ++L G PN I N LM+ G ++ ++ ++ + G
Sbjct: 298 DALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE 357
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
D ++Y LI C+ + A+++L ++ N ++TI + K + V+ A+ +
Sbjct: 358 PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRM 417
Query: 269 YSEMVAGE 276
YS+M+ +
Sbjct: 418 YSKMMEAK 425
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F +L P+ I F+ ++ +K + + +QM+ G PD +T + LI
Sbjct: 309 AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C L +A V+ ++K+ + N NT+ + + K V A + ++
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEP 428
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ V+Y L+ + T L++ ++++ PNV Y ++ C + ++AY L+
Sbjct: 429 NTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLF 488
Query: 270 SEMV 273
EMV
Sbjct: 489 KEMV 492
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A ++ + +++ P+ ++ ++ L A L ++ KGI D VT +ILIN
Sbjct: 346 AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN 405
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC G AF++ ++ G QP +L+ LC K + A E + VV +G +
Sbjct: 406 GYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKP 465
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V TL++G C G+ A LL++++ P+ + Y+ ++ LC +A +L
Sbjct: 466 DLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELM 525
Query: 270 SEM 272
EM
Sbjct: 526 GEM 528
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ ++ ++ L + A L ++ KG++PD+V + L++ +C +G + AFS+
Sbjct: 430 PTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSL 489
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + P+ + N LM+GLC +G + A E ++ +G + D +SY TLI+G K
Sbjct: 490 LKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
GDT+ A + ++ P ++ Y+ ++ L K + A +L EM
Sbjct: 550 KGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F +++ P ++ + ++ + + A SL +M++ I PD VT + L+
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G+ A +MG + +RG +P+ I NTL+ G KG + A D++++ GF
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSL 256
++Y L+ GL K + A LLR++ EG PN + ++I+++
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 134 HQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLK 193
+M+ G+ PD V+ +ILI + G L AF+ ++K+G P NTL+ GL ++
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME 375
Query: 194 GMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMY 249
++ A ++ +G LD V+Y LING C+ GD + A L ++ +G P Y
Sbjct: 376 NKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTY 435
Query: 250 STIIDSLCKVKLVSDAYDLYSEMVA 274
+++I LC+ +A +L+ ++V
Sbjct: 436 TSLIYVLCRKNKTREADELFEKVVG 460
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + +++++ A + +M +G+ P T + LI+ ++ +A +
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ I ++G +++ N L+ G C G ++A HD+++ G + + +Y +LI LC+
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
TR A L ++ G P+++M +T++D C + + A+ L EM
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
+ +++++ + A +L +M GI+P T + LI C + A +
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
++ +G +P+ +++NTLM G C G + RA ++ D+V+Y L+ GLC G
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 231 TRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFH 278
A L+ +++ P+ I Y+T+I K A+ + EM++ F+
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRG 175
ILT L ++ A M I+ ++ T +I+IN C G+L A +G + G
Sbjct: 196 ILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFG 255
Query: 176 YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL 235
+P + NTL++G L+G ++ A ++ ++GF+ D +Y +++ +C G L
Sbjct: 256 IKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL 315
Query: 236 RLLRQIE-GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
R +++I P+ + Y+ +I + A+ EMV
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMV 354
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 96 SFFNRLLQMH---PTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ F+ L+ H T S I F +++ +++ AI + M+ KG P T + ++
Sbjct: 138 NLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHIL 197
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
L ++ +A+ ++ + + N N ++ LC +G +++A F + G +
Sbjct: 198 TLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIK 257
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSD 264
V+Y TL+ G G A ++ +++ P++ Y+ I+ +C S+
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE 313
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D+ S L+ P++ + +L L K AI + M GI PD + L+
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C G + A ++ + GY NT+ N L++GLC+ G + ++++F + ++ +G
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ +Y+ L+ K T A++LL +I +G PN++ Y+ ++ CK DA L
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 269 YSEMVAGEF 277
+ E+ A F
Sbjct: 269 FRELPAKGF 277
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
++ F RL+Q P+ +S +L + K + A+ L ++ +KG P++V+ ++L+
Sbjct: 195 SLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLT 254
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C G+ A ++ + +G++ N + N L++ LC G + A ++
Sbjct: 255 GFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAP 314
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPN------VIMYSTIIDSLCKVKLVSDAYD 267
V+Y LIN L G T AL++L+++ N Y+ +I LCK V
Sbjct: 315 SVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVK 374
Query: 268 LYSEMV-------AGEFHLMLSLIMH 286
EM+ G ++ + SL H
Sbjct: 375 CLDEMIYRRCKPNEGTYNAIGSLCEH 400
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 5/179 (2%)
Query: 102 LQMHPTPS-IIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
++ H PS + ++ ++ L + + ++ ++ KG+ P+ T S L+
Sbjct: 167 MEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERG 226
Query: 161 LTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYAT 220
A ++ I+ +G +PN + N L+ G C +G AM ++ A+GF+ + VSY
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 221 LINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAG 275
L+ LC G A LL +++G P+V+ Y+ +I+SL A + EM G
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKG 345
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 86/173 (49%), Gaps = 9/173 (5%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV + ++ P+++ ++++LT K A++L ++ KG + ++V+ +IL+
Sbjct: 229 EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG-- 210
C C G+ A S++ + P+ + N L+ L G ++A++ + +++G
Sbjct: 289 RCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE-MSKGNH 347
Query: 211 -FRLDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCK 258
FR+ SY +I LCK G ++ L ++ PN Y+ I SLC+
Sbjct: 348 QFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCE 399
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 142 RPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAME 201
+PD+ + S + L+ +FS + +++ G++PN L+ LC +++A+
Sbjct: 68 KPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIR 127
Query: 202 FHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLC 257
+ +V+ G D +Y L+N LCK G+ A++L+ ++E N + Y+ ++ LC
Sbjct: 128 VIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLC 187
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P ++ ++ +++ K A SL M GI P VT ++L++ Y G++ +A
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ G ++ G P+ + +L+ G C G V + +++ A+G + +Y+ LIN LC
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 227 KTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAYDLYSEM 272
A LL Q+ ++I MY+ +ID CK V++A + EM
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F+ L+ F++++ L + A+ L M G PDIVT + LI
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 153 NCYCHLGQLTSAFSVMGNILKRGY--QPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
+C +L A S M +K G P+ + +++ G C G ++ A DD++ G
Sbjct: 249 QGFCKSNELNKA-SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 211 FRLDEVSYATLINGLCKTGDTRAALRLLRQIEG--------PNVIMYSTIIDSLCKVKLV 262
V++ L++G K G+ A +I G P+V+ ++++ID C+V V
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 263 SDAYDLYSEMVA 274
S + L+ EM A
Sbjct: 364 SQGFRLWEEMNA 375
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A S + +L++ P+ + F++++ K TA + +M G PD+VT + LI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC +GQ++ F + + RG PN + L+ LC + + +A E + ++
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
Y +I+G CK G A ++ ++E P+ I ++ +I C + +A +
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 269 YSEMVA 274
+ +MVA
Sbjct: 475 FHKMVA 480
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 125 HYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILN 184
H++TA+ L E++G + + L+N L ++ A + L+ +T N
Sbjct: 155 HFATALLL-QSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN 210
Query: 185 TLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE-- 242
L++GLC G ++A+E + G D V+Y TLI G CK+ + A + + ++
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Query: 243 ---GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
P+V+ Y+++I CK + +A L +M+
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
S ++++ SL K + A + M+ G+ P+ L++ + G+L A +++
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
+ + +++N+L+ L V+ AM+ D+ + D ++ LI GLC
Sbjct: 162 LQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219
Query: 229 GDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAG 275
G AL LL + G P+++ Y+T+I CK ++ A +++ ++ +G
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH---------- 157
P ++ F+ ++ ++ S L +M +G+ P+ T SILIN C+
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 158 LGQLTS---------------AFSVMGNI----------LKRGYQPNTIILNTLMKGLCL 192
LGQL S F G + K+ +P+ I L+ G C+
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 193 KGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL---LRQIEGPNVIMY 249
KG + A+ +VA G D+++ ++L++ L K G + A L R+ + NV+
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPL 524
Query: 250 ST 251
T
Sbjct: 525 ET 526
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P ++ ++ +++ K A SL M GI P VT ++L++ Y G++ +A
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ G ++ G P+ + +L+ G C G V + +++ A+G + +Y+ LIN LC
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 227 KTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAYDLYSEM 272
A LL Q+ ++I MY+ +ID CK V++A + EM
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F+ L+ F++++ L + A+ L M G PDIVT + LI
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 153 NCYCHLGQLTSAFSVMGNILKRGY--QPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
+C +L A S M +K G P+ + +++ G C G ++ A DD++ G
Sbjct: 249 QGFCKSNELNKA-SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 211 FRLDEVSYATLINGLCKTGDTRAALRLLRQIEG--------PNVIMYSTIIDSLCKVKLV 262
V++ L++G K G+ A +I G P+V+ ++++ID C+V V
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 263 SDAYDLYSEMVA 274
S + L+ EM A
Sbjct: 364 SQGFRLWEEMNA 375
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A S + +L++ P+ + F++++ K TA + +M G PD+VT + LI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC +GQ++ F + + RG PN + L+ LC + + +A E + ++
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
Y +I+G CK G A ++ ++E P+ I ++ +I C + +A +
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 269 YSEMVA 274
+ +MVA
Sbjct: 475 FHKMVA 480
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 125 HYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILN 184
H++TA+ L E++G + + L+N L ++ A + L+ +T N
Sbjct: 155 HFATALLL-QSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN 210
Query: 185 TLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE-- 242
L++GLC G ++A+E + G D V+Y TLI G CK+ + A + + ++
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Query: 243 ---GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
P+V+ Y+++I CK + +A L +M+
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
S ++++ SL K + A + M+ G+ P+ L++ + G+L A +++
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
+ + +++N+L+ L V+ AM+ D+ + D ++ LI GLC
Sbjct: 162 LQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219
Query: 229 GDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAG 275
G AL LL + G P+++ Y+T+I CK ++ A +++ ++ +G
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH---------- 157
P ++ F+ ++ ++ S L +M +G+ P+ T SILIN C+
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 158 LGQLTS---------------AFSVMGNI----------LKRGYQPNTIILNTLMKGLCL 192
LGQL S F G + K+ +P+ I L+ G C+
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 193 KGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL---LRQIEGPNVIMY 249
KG + A+ +VA G D+++ ++L++ L K G + A L R+ + NV+
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPL 524
Query: 250 ST 251
T
Sbjct: 525 ET 526
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV+ + + +P++I ++ ++ L K A+ + +M+ KG++ DI LI+
Sbjct: 603 AVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALID 662
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C + SA ++ +L+ G P+ I N+L+ G G + A++ + ++ G R
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y TLI+GL K G+ A L +++ P+ I+Y+ I++ L K ++
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782
Query: 270 SEM 272
EM
Sbjct: 783 EEM 785
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 91/184 (49%), Gaps = 5/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F+ ++ + TPS+ I+ LK + + A+ L + G+ V ++IL +
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTIL-S 451
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G+ A ++ + RG PN + N +M G C + + A +++ +G +
Sbjct: 452 WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKP 511
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLY 269
+ +Y+ LI+G + D + AL ++ + N+ ++Y TII+ LCKV S A +L
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 270 SEMV 273
+ M+
Sbjct: 572 ANMI 575
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRG 175
IL+ L K A L +ME +GI P++V+ + ++ +C + A V NIL++G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 176 YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL 235
+PN + L+ G Q A+E + + + ++ V Y T+INGLCK G T A
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 236 RLLRQ-IEGPNVIM----YSTIIDSLCKVKLVSDAYDLYSEM 272
LL IE + + Y++IID K + A Y EM
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 105 HPTPSIIE-----FSMILTSLLKMKHYSTAISL-SHQMELKGIRPDIVTSSILINCYCHL 158
H T S IE + I+ L K+ S A L ++ +E K + ++ + +I+ +
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 159 GQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSY 218
G++ SA + + G PN I +LM GLC + +A+E D++ +G +LD +Y
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 219 ATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
LI+G CK + +A L ++ EG P+ +Y+++I + + A DLY +M+
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS ++ ++ + +K + AI L +M GI ++V ++ LI +C L SA +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ K G PN++ + L++ G +++A+EF+ + G T+I G K
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 228 TGDTRAALRLLRQ-IEG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
AL+L + E NV + +TI+ LCK +A +L S+M
Sbjct: 422 GQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM 469
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ + +L + +++ + ++T K +A+ L +ME +G P+ VT S+LI
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMV-QRAMEFHDDVVAQGF 211
+ G++ A + G P+ ++T+++G LKG + A++ D+ G
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW-LKGQKHEEALKLFDESFETGL 440
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVK 260
+ T+++ LCK G T A LL ++E GPNV+ Y+ ++ C+ K
Sbjct: 441 -ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQK 492
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 62/131 (47%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ + ++L+ + ++ ++ LLK + A L +M+ G+ PD + ++++N
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN 767
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
GQ + + K PN +I N ++ G +G + A HD+++ +G
Sbjct: 768 GLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Query: 214 DEVSYATLING 224
D ++ L++G
Sbjct: 828 DGATFDILVSG 838
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F+ LQ P +I +++++ + + + AI + M ++G PDIVT + L+N
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G L SV+ +IL G + NT+ NTL+ LC E + + +
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 214 DEVSYATLINGLCKTGDTRAAL----RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
++Y LINGLCK A+ ++L Q P+++ Y+T++ ++ K +V DA +L
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 39/205 (19%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I ++MI+ +L K H TA+ L M L G PD++T + +I C G A
Sbjct: 172 PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF 231
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ L+ G P I L++ +C RA+E +D+ +G D V+Y +L+N C+
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 228 TGDTRAALRLLRQIEG---------------------------------------PNVIM 248
G+ +++ I P VI
Sbjct: 292 RGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVIT 351
Query: 249 YSTIIDSLCKVKLVSDAYDLYSEMV 273
Y+ +I+ LCK +L+S A D + +M+
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQML 376
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
N + Q P++I +++++ L K + S AI +QM + PDIVT + ++
Sbjct: 335 EILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAM 394
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
G + A ++G + P I N+++ GL KG++++A+E + ++ G D+
Sbjct: 395 SKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDD 454
Query: 216 VSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSE 271
++ +LI G C+ A ++L++ G Y +I LCK K + A ++
Sbjct: 455 ITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEI 514
Query: 272 MVAG 275
M+ G
Sbjct: 515 MLTG 518
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + + + P S ++ L ++ A+ + M + G PD +T +++I
Sbjct: 122 DACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMII 181
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G + +A ++ ++ G P+ I NT+++ + G ++A+ F D + G
Sbjct: 182 GNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCP 241
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCK 258
++Y L+ +C+ + A+ +L +EG P+++ Y+++++ C+
Sbjct: 242 PFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ FF ++L+ P I+ ++ +L ++ K AI L ++ P ++T + +I+
Sbjct: 368 AIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
G + A + +L G P+ I +L+ G C +V+ A + + +G +
Sbjct: 428 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 487
Query: 214 DEVSYATLINGLCKTGDTRAALRLLR-QIEG---PNVIMYSTIIDSLCKVKLVSDA 265
+Y +I GLCK + A+ ++ + G P+ +Y+ I+ + ++ + S+A
Sbjct: 488 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ L P +I ++ ++ L K A+ L HQM GI PD +T LI
Sbjct: 402 DAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C + A V+ RG +++GLC K ++ A+E + ++ G +
Sbjct: 462 YGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCK 521
Query: 213 LDEVSYATLINGLCKTG 229
DE Y ++ G+ + G
Sbjct: 522 PDETIYTAIVKGVEEMG 538
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRG 175
IL +L + A L M P + S L+ + QL A ++ ++ G
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 176 YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL 235
P+TI N ++ LC KG ++ A+ +D+ G D ++Y T+I + G+ A+
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 236 RLLR-QIEG---PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
R + Q++ P +I Y+ +++ +C+ + A ++ +M
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDM 270
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 6/183 (3%)
Query: 103 QMHPTP--SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
+M P ++ +S ++ + + + A L +M KG+ ++VT + LI + G
Sbjct: 316 EMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGN 375
Query: 161 LTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYAT 220
+ A ++ + + G P+ I T++ LC G V +A +D++ D +SY +
Sbjct: 376 SSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNS 435
Query: 221 LINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
LI+GLC++G A++L ++G P+ + + II L + K +S AY ++ +M+
Sbjct: 436 LISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Query: 277 FHL 279
F L
Sbjct: 496 FTL 498
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 41/208 (19%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
S + ++ +++ K A +L M G PD+VT ++L+N Y L A VM
Sbjct: 219 STVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFH-DDVVAQGFRLDEVSYATLINGLCK 227
+++ G Q + N L+K C + F ++ +GF D VSY+TLI C+
Sbjct: 279 AEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCR 337
Query: 228 TGDTRAALRLLRQI---------------------EG------------------PNVIM 248
+TR A RL ++ EG P+ I
Sbjct: 338 ASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIF 397
Query: 249 YSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
Y+TI+D LCK V AY ++++M+ E
Sbjct: 398 YTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F + Q +++ ++ ++ + L+ + S A L QM G+ PD + + +++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G + A+ V ++++ P+ I N+L+ GLC G V A++ +D+ +
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCK 258
DE+++ +I GL + AA ++ Q+ + + D+L K
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIK 508
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 5/177 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I F++ L L + A+ M +G PD+V+ +ILIN G++T A +
Sbjct: 112 PDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEI 171
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEF-HDDVVAQGFRLDEVSYATLINGLC 226
+++ G P+ L+ GLC V A E +++ + +L V Y LI+G C
Sbjct: 172 WNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFC 231
Query: 227 KTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHL 279
K G A L + P+++ Y+ +++ ++ A + +EMV L
Sbjct: 232 KAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQL 288
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQM---ELKGIRPDI--VT 147
DAV +N +++ +P + ++ L ++ + L+++M E+K R + V
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLC----HARKVDLAYEMVAEEIKSARVKLSTVV 222
Query: 148 SSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVV 207
+ LI+ +C G++ A ++ + K G +P+ + N L+ M++RA ++V
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 208 AQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVS 263
G +LD SY L+ C+ + + P +V+ YST+I++ C+
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTR 342
Query: 264 DAYDLYSEM 272
AY L+ EM
Sbjct: 343 KAYRLFEEM 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+S ++ L K+K + +L ME G PDI ++ ++ C ++ A ++
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+RG +P+ + L+ GL G V A+E + ++ G D + A L+ GLC
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 233 AALRLL-RQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLYSEM 272
A ++ +I+ V ++Y+ +I CK + A L S M
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM 246
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F +++L + + S+IL KM A+ + I D V ++
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAF 395
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ LG++ AF ++ + RG P+ I TL+ G CL+G V A++ D+++ G
Sbjct: 396 DALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMS 455
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
D ++Y L++GL + G L + ++ EG PN + S II+ LC + V +A D
Sbjct: 456 PDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDF 515
Query: 269 YSEM 272
+S +
Sbjct: 516 FSSL 519
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 82/177 (46%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F M+ + +++ +L K+ A L +M+ +GI PD++ + LI
Sbjct: 371 EALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLI 430
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC G++ A ++ ++ G P+ I N L+ GL G + +E ++ + A+G +
Sbjct: 431 DGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ V+ + +I GLC + A +E ++ + C+ L AY +
Sbjct: 491 PNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAF 547
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 121 LKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNT 180
+KMK A S+ +ME G D+ +I+ YC L A + +L +G + N
Sbjct: 297 MKMK---AAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNC 353
Query: 181 IILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQ 240
+I++ +++ C M A+E + LD V Y + L K G A LL++
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Query: 241 IEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
++ P+VI Y+T+ID C V DA DL EM+
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIG 451
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 17/174 (9%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRG 175
++ + K+ + A L M +G+ PD+ T +I+I+ YC L +L A S+ ++ +RG
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 176 YQPN----TIILNTLMK-------GLCLKGMV--QRAMEFHDDVVAQGFRLDEVSYATLI 222
+P+ T++L+ +K ++G V ++A E + A G LD V Y LI
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLI 716
Query: 223 NGLCKTGDTRAALRLL-RQIEG---PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ CK + A L R I+ P+++ Y+T+I S + + A L +E+
Sbjct: 717 DRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
F+ IL L K K A L + + D VT ++++N +C + + A V+ ++
Sbjct: 164 FNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMV 222
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+RG PN NT++KG G ++ A EF ++ + +D V+Y T+++G G+ +
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 233 AALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
A + ++ EG P+V Y+ +I LCK V +A ++ EMV
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
F + + ++ + T SL H+M I P T +I+ Y G+ A + N+
Sbjct: 94 FDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMH 153
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ G + NT++ LC V++A E + + F +D V+Y ++NG C T
Sbjct: 154 EHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTP 212
Query: 233 AALRLLRQ-IE---GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
AL +L++ +E PN+ Y+T++ + + A++ + EM
Sbjct: 213 KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 256
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 73/175 (41%), Gaps = 4/175 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A FF + + ++ ++ ++ A ++ +M +G+ P + T + +I
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 308
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C + +A + +++RGY+PN N L++GL G R E + +G
Sbjct: 309 VLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 368
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSD 264
+ +Y +I + + AL L ++ PN+ Y+ +I + K D
Sbjct: 369 NFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+S ++ + P++ +++++ +L S A++L QM GI+PD ++LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C L A ++ ++L+ G PN I N L+KG C K V +AM ++ Q
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLV 361
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI 247
D ++Y TLI G C +G+ +A RLL +E ++
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLV 396
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ +L+SL + L +M + PDI T + L+N YC LG + A + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ G P+ + + G C + V A + ++ G +EVSY LI GL +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 233 AALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
AL LL +++ PNV Y+ +ID+LC S+A +L+ +M
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F + Q + + ++ ++ L + K A+SL +M+ P++ T ++LI+
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLID 268
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C GQ + A ++ + + G +P+ + L++ C + A + ++ G
Sbjct: 269 ALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP 328
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG---PNVIMYSTIIDSLCKVKLVSDAYDLYS 270
+ ++Y LI G CK +A L + +E P++I Y+T+I C + AY L S
Sbjct: 329 NVITYNALIKGFCKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLS 388
Query: 271 EM 272
M
Sbjct: 389 LM 390
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 14/197 (7%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
+ +L+ +P I F+ ++ K+ + A + G PD T + I +C
Sbjct: 143 YTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCR 202
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAM----EFHDDVVAQGFRL 213
++ +AF V + + G N + L+ GL + A+ + DD R
Sbjct: 203 RKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR- 261
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+Y LI+ LC +G A+ L +Q+ P+ MY+ +I S C + +A L
Sbjct: 262 ---TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL 318
Query: 270 SEMVAGEFHLMLSLIMH 286
M+ E LM ++I +
Sbjct: 319 EHML--ENGLMPNVITY 333
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 9/199 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + L+Q P ++ +T + K A + +M G + V+ + LI
Sbjct: 173 EAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI 232
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
++ A S++ + PN L+ LC G AM + G +
Sbjct: 233 YGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIK 292
Query: 213 LDEVSYATLINGLCKTGDT--RAALRLLRQIEG---PNVIMYSTIIDSLCKVKLVSDAYD 267
D+ Y LI C +GDT A+ L +E PNVI Y+ +I CK K V A
Sbjct: 293 PDDCMYTVLIQSFC-SGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMG 350
Query: 268 LYSEMVAGEFHLMLSLIMH 286
L S+M+ E +L+ LI +
Sbjct: 351 LLSKML--EQNLVPDLITY 367
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + +N +L+ + +P++ F +++ L K S A + M +GI P+ VT +ILI+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G A + + G P+++ N L+ G C G + A E GF L
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 214 DEVSYATLINGLCKTGDTRAALRL----LRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
Y++LI+GL + A L L++ P++I+Y+ +I L K + DA L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 270 SEM 272
S M
Sbjct: 362 SSM 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMK-HYSTAISLSHQMELKGIRPDIVTSSILI 152
AV F R+ + P + +++IL +++ + + A ++ ++M P++ T IL+
Sbjct: 146 AVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILM 205
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G+ + A + ++ RG PN + L+ GLC +G A + ++ G
Sbjct: 206 DGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNY 265
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIM----YSTIIDSLCKVKLVSDAYDL 268
D V++ L++G CK G A LLR E ++ YS++ID L + + + A++L
Sbjct: 266 PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFEL 325
Query: 269 YSEMV 273
Y+ M+
Sbjct: 326 YANML 330
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+S ++ L + + Y+ A L M K I+PDI+ +ILI G++ A ++ ++
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+G P+T N ++K LC +G+++ ++ D ++ LI +C+ G R
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 233 AALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAG 275
A + +IE P+V ++ +ID LCK + +A L +M G
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG 472
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F+ + +P+ + ++++++ L + A L ++M+ G PD V + L+
Sbjct: 216 DAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALL 275
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C LG++ AF ++ K G+ ++L+ GL +A E + +++ + +
Sbjct: 276 DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK 335
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D + Y LI GL K G AL+LL + P+ Y+ +I +LC L+ + L
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL 395
Query: 269 YSEMVAGE 276
EM E
Sbjct: 396 QLEMSETE 403
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + +L+ + P II +++++ L K A+ L M KGI PD + +I
Sbjct: 322 AFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIK 381
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G L S+ + + P+ L+ +C G+V+ A E ++ G
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSP 441
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE 242
++ LI+GLCK+G+ + A LL ++E
Sbjct: 442 SVATFNALIDGLCKSGELKEARLLLHKME 470
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 14/187 (7%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIV------ 146
+A F + + +PS+ F+ ++ L K A L H+ME+ RP +
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG--RPASLFLRLSH 483
Query: 147 TSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDV 206
+ + + G + A+ + + G P+ + N L+ G C G + A++ + +
Sbjct: 484 SGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVL 543
Query: 207 VAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLV 262
+G D V+Y TLINGL + G A +L + P V Y +++ C+ + V
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKV 601
Query: 263 SDAYDLY 269
A++L+
Sbjct: 602 LVAFNLW 608
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 7/170 (4%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG--QLTSAFS 166
++ FS ++++ + + AIS+ + M+ G+RP++VT + +I+ C G +
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAK 325
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ + G QP+ I N+L+ G+ + A D++ + D SY TL++ +C
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 227 KTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
K G A +L Q+ PNV+ YST+ID K +A +L+ EM
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A++ F + + + ++ +L+ K+ A+ + +M GI+ D+VT + L+
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
Y G+ V + + PN + +TL+ G G+ + AME + + G R
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYD 267
D V Y+ LI+ LCK G +A+ L+ ++ EG PNV+ Y++IID+ + + + D
Sbjct: 547 ADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+++ +S ++ K + A++L +M GI D V+ + L++ Y +G+ A +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G + + + N L+ G +G + ++ + + ++Y+TLI+G K
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
G + A+ + R+ + +V++YS +ID+LCK LV A L EM
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 95 VSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINC 154
FF+ + + P I F+ +L + + A +L +M + I D+ + + L++
Sbjct: 324 AKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 155 YCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLD 214
C GQ+ AF ++ + + PN + +T++ G G A+ ++ G LD
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 215 EVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYS 270
VSY TL++ K G + AL +LR++ +V+ Y+ ++ K + +++
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 271 EM 272
EM
Sbjct: 504 EM 505
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 86/182 (47%), Gaps = 4/182 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + F+ + + ++ +L ++ K A + QM +K I P++V+ S +I+
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ G+ A ++ G + G + + NTL+ G + A++ ++ + G +
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V+Y L+ G K G ++ +++ PN++ YST+ID K L +A +++
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 270 SE 271
E
Sbjct: 538 RE 539
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 85/200 (42%), Gaps = 25/200 (12%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F + + H P+++ +S ++ K Y A+ + + + G+R D+V S LI+ C
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDD------------ 205
G + SA S++ + K G PN + N+++ + R+ ++ +
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSA 621
Query: 206 -VVAQGFRLDEV--SYATLINGL----CKTGDTR-----AALRLLRQIE-GPNVIMYSTI 252
+G R+ ++ T N C+ G R + Q+E PNV+ +S I
Sbjct: 622 LTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAI 681
Query: 253 IDSLCKVKLVSDAYDLYSEM 272
+++ + DA L E+
Sbjct: 682 LNACSRCNSFEDASMLLEEL 701
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 5/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ FF R+ ++ P++ F+ ++ L + + ME G++PD+VT S L+
Sbjct: 549 EALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N + +G + + ++L+ G P+ + L KG G ++A + + + G R
Sbjct: 609 NAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVR 668
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG-----PNVIMYSTIIDSLCKVKLVSDAYD 267
+ V Y +I+G C G+ + A+++ +++ G PN+ Y T+I + K A +
Sbjct: 669 PNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEE 728
Query: 268 LYSEM 272
L +M
Sbjct: 729 LLKDM 733
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 90/181 (49%), Gaps = 5/181 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A S FN L++ PS+I ++ ++T+L + KH+ + +SL ++E G++PD + + +I
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVV-AQGF 211
N G L A + + + G +P NTL+KG G ++ + D ++ +
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 456
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
+ ++ + L+ C A ++ +++ P+V+ ++T+ + ++ A D
Sbjct: 457 QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAED 516
Query: 268 L 268
+
Sbjct: 517 M 517
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ FS ++ + + + M GI PDI SIL Y G+ A +
Sbjct: 599 PDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQI 658
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVA-QGFRLDEVSYATLINGLC 226
+ + K G +PN +I ++ G C G +++AM+ + + G + +Y TLI G
Sbjct: 659 LNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFG 718
Query: 227 KTGDTRAALRLLRQIEGPNVI 247
+ A LL+ +EG NV+
Sbjct: 719 EAKQPWKAEELLKDMEGKNVV 739
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
R+L P++ I+ + A+ ++M+ G+ P++ + LI + ++
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
+ V+ + + G +P+ + +TLM G ++R E + D++ G D +++
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 220 TLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
L G + G+ A ++L Q+ PNV++Y+ II C + A +Y +M
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG 699
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 114 SMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS-VMGNIL 172
++++ + + A ++ ++M+ G++PD+VT + L Y +G +A ++ +L
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRML 523
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+PN T++ G C +G ++ A+ F + G + + +LI G D
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 233 AALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAG 275
++ +E P+V+ +ST++++ V + ++Y++M+ G
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG 630
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Query: 114 SMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILK 173
+ ++ L++ A S+ + + +G +P ++T + L+ S S++ + K
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 174 RGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRA 233
G +P+TI+ N ++ G + +AM+ + + G + ++ TLI G K G
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 234 ALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ RLL ++ PN + ++ + C + + +A+++ +M
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 140 GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRA 199
G+ PD+ ++LI+ +C +G+L+ A S++ N R +T+ NT++ GLC G+ A
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEA 180
Query: 200 MEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKV 259
+F ++V G D VSY TLI+G CK G+ A L+ +I N+I ++ ++ S +
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNL 240
Query: 260 KLVSDAY 266
+ +AY
Sbjct: 241 HAIEEAY 247
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 4/174 (2%)
Query: 103 QMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLT 162
+M P+ + ++ ++ SL K Y A++L QM ++GI D+V ++L++ G L
Sbjct: 287 EMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLR 346
Query: 163 SAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
A +L+ PN + L+ GLC G + A ++ + + V+Y+++I
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 223 NGLCKTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAYDLYSEM 272
NG K G A+ LLR++E NV+ Y T+ID L K A +L EM
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 6/171 (3%)
Query: 109 SIIEFSMILTSLLKMKHYST-AISLSHQ-MELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
I E ++I ++L +Y+ AI +++ M + G PD+VT S +IN C G++
Sbjct: 221 EISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL 280
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ + + PN + TL+ L + + A+ + +V +G +D V Y L++GL
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 227 KTGDTRAALR----LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
K GD R A + LL + PNV+ Y+ ++D LCK +S A + ++M+
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
+ ++ +++ L + A +M GI PD V+ + LI+ +C +G A +++
Sbjct: 162 VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 221
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
I + +TI+L++ + E + D+V GF D V+++++IN LCK G
Sbjct: 222 ISELNLITHTILLSSYYN-------LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGK 274
Query: 231 TRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
LLR++E PN + Y+T++DSL K + A LYS+MV
Sbjct: 275 VLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV 321
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK-GIRPDIVTSSIL 151
+A+ N+++ M P++ + + L + K K + AI +H+ L GI+ + L
Sbjct: 626 EAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR-ADAIFKTHETLLSYGIKLSRQVYNTL 684
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I C LG A VMG++ RG+ P+T+ N+LM G + V++A+ + ++ G
Sbjct: 685 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 744
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
+ +Y T+I GL G + + L +++ P+ Y+ +I K+ + +
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 804
Query: 268 LYSEMVA 274
+Y EM+A
Sbjct: 805 IYCEMIA 811
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 86/167 (51%), Gaps = 10/167 (5%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY---CHLGQLTSAFSVMG 169
++ ++ +L K+ A + ME +G PD VT + L++ Y H+ + S +SVM
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM- 739
Query: 170 NILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTG 229
++ G PN NT+++GL G+++ ++ ++ ++G R D+ +Y LI+G K G
Sbjct: 740 --MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Query: 230 DTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ + ++ + ++ +G P Y+ +I V + A +L EM
Sbjct: 798 NMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEM 844
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 95 VSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINC 154
+ ++++ PS++ ++++ L + AI + +QM L I P++ T I ++
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 155 YCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLD 214
+ + F +L G + + + NTL+ LC GM ++A D+ A+GF D
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 215 EVSYATLINGLCKTGDTRAALR----LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYS 270
V++ +L++G R AL ++ PNV Y+TII L L+ + S
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 271 EM 272
EM
Sbjct: 773 EM 774
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F LL+ + P+++ ++ ++ L K S+A + QM K + P++VT S +I
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N Y G L A S++ + + PN T++ GL G + A+E ++ G
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNV----IMYSTIIDSLCK 258
+ L+N L + G + L++ + V I Y+++ID K
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 4/156 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + F+ ++ H A+S M GI P++ T + +I G +
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 770
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + RG +P+ N L+ G G ++ +M + +++A G +Y LI+
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKV 259
G A LL+++ PN Y T+I LCK+
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 65/134 (48%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S ++ +++ +P++ ++ I+ L +M+ +G+RPD T + LI+
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 791
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+G + + ++ ++ G P T N L+ G + +A E ++ +G
Sbjct: 792 GQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP 851
Query: 214 DEVSYATLINGLCK 227
+ +Y T+I+GLCK
Sbjct: 852 NTSTYCTMISGLCK 865
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
++ ++++++ +LK + E KGI PDI T +I++N G +
Sbjct: 538 DVVSYNVLISGMLKFGKVGADWAYKGMRE-KGIEPDIATFNIMMNSQRKQGDSEGILKLW 596
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRA---------MEFHDDVVAQGFRLDEVSYA 219
+ G +P+ + N ++ LC G ++ A ME H ++ LD S
Sbjct: 597 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKH 656
Query: 220 TLINGLCKTGDT--RAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
+ + KT +T ++L RQ+ Y+T+I +LCK+ + A + +M A F
Sbjct: 657 KRADAIFKTHETLLSYGIKLSRQV-------YNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 151 LINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEF-HDDVVAQ 209
L Y +L A + + G P++ + N+L+ + G+V + + ++A
Sbjct: 64 LFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIAC 123
Query: 210 GFRLDEVSYATLINGLCKTGDTRAALRLLR-QIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
G D + LI+ CK G A+ LLR ++ + + Y+T+I LC+ L +AY
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQF 183
Query: 269 YSEMV 273
SEMV
Sbjct: 184 LSEMV 188
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A S F +++ P++ ++ ++ K + A+ L +ME + PD+ T +ILIN
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C Q+ A + + P++ N+L+ G C + +++A++ ++ A G
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ ++++TLI+G C D +AA+ L + I+G P+V+ Y+ +ID+ K + +A LY
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Query: 270 SEMVAGEFH 278
S+M+ H
Sbjct: 503 SDMLEAGIH 511
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + +L P+++ F ++ K + TA SL M G+ P++ + LI+
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C G + A ++ + P+ L+ GLC++ V A + +
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+Y +LI+G CK + AL L ++ PN+I +ST+ID C V+ + A LY
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Query: 270 SEM 272
EM
Sbjct: 468 FEM 470
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+II FS ++ ++ A+ L +M +KGI PD+VT + LI+ + + A +
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
++L+ G PN L+ G +G + A++F+ + Q + V + LI GLC+
Sbjct: 502 YSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
G A R + P++ Y +++ + K ++D L +M+
Sbjct: 562 NGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI 611
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P++ +S ++ K + A L ++ + + P++V L++ +C +L +A S+
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+++K G PN + N L+ G C G + A+ ++ + D +Y LINGLC
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
A RL ++++ P+ Y+++I CK + A DL SEM A
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTA 437
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 4/183 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV + + ++ +P + +++++ L + A L +M+ + I P T + LI
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC + A + + G +PN I +TL+ G C ++ AM + ++ +G
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ-IEG---PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y LI+ K + + ALRL +E PN ++ ++D K +S A D
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Query: 269 YSE 271
Y E
Sbjct: 537 YQE 539
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 103 QMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLT 162
+M +P IL L++ + + + M +G+ PD+ +L C G +
Sbjct: 157 EMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 163 SAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
++ + G +PN I + LC ++ A + + + G + +Y+ +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 223 NGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+G CKTG+ R A L ++I PNV+++ T++D CK + + A L+ MV
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 8/184 (4%)
Query: 98 FNRLLQMH-PTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYC 156
FN L + P SI FS+++ L+M + A+ +S +M+ PD ++N
Sbjct: 119 FNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLV 175
Query: 157 HLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEV 216
+ S + ++ RG P+ I L + +G+ + + D++ + G + +
Sbjct: 176 RRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVY 235
Query: 217 SYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
Y I LC+ A ++ ++ PN+ YS +ID CK V AY LY E+
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295
Query: 273 VAGE 276
+ E
Sbjct: 296 LVAE 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + + ++ K YS L +M GI+P++ +I I C ++ A +
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ K G PN + ++ G C G V++A + +++ + V + TL++G CK
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
Query: 228 TGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ A L + PN+ +Y+ +I CK + +A L SEM
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
S+ ++ ++ L K + A +M+ +GI P++VT + ++ Y G + V+
Sbjct: 424 SVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVL 483
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
+L G++P+ I + ++ LC ++ A + +++ G +E++Y LI C T
Sbjct: 484 EKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCST 543
Query: 229 GDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
GDT +++L +++ P++ Y+ I S CK++ V A +L M+
Sbjct: 544 GDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F+ + P + +++ +LL + +S QM + G+ + + + +I+C C
Sbjct: 378 FDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCK 437
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
++ +A + + RG PN + NT + G ++G V++ + ++ GF+ D ++
Sbjct: 438 ARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVIT 497
Query: 218 YATLINGLCKTGDTRAALRLLRQ-----IEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
++ +IN LC+ + + A ++ IE PN I Y+ +I S C + L+++M
Sbjct: 498 FSLIINCLCRAKEIKDAFDCFKEMLEWGIE-PNEITYNILIRSCCSTGDTDRSVKLFAKM 556
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P +I FS+I+ L + K A +M GI P+ +T +ILI C G + +
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G P+ N ++ C V++A E ++ G + D +Y+TLI L +
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 228 TGDTRAALRLLRQIE 242
+G A + IE
Sbjct: 613 SGRESEAREMFSSIE 627
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Query: 150 ILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ 209
+LI + LG V I G +P+T + N ++ L + A + +
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 210 GFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDA 265
G + D +Y LI+G+CK G A+RL++Q+E PNV Y+ +ID V +A
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 54/118 (45%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F +L+ P+ I +++++ S ++ L +M+ G+ PD+ + I
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
+C + ++ A ++ +L+ G +P+ +TL+K L G A E + G
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS ++ ++ +L+K A QM G +PD T +ILI+ C G + A +
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGL 225
+ + + G +PN L+ G + G V A++ + + + +E + T ++G+
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGI 295
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS+ + I+ L K A + ++ KG PD V + +I +C G L SA +
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
++K+G +PN N ++ G +G + F+++++ G+ +S T+I G C
Sbjct: 341 WFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCS 400
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
G + A + + + PN I Y+ +I CK V LY E+ A
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKA 451
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F L P + ++ ++ + +A L +M KG+RP+ +++I
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + G+++ + +L+ GY + NT++KG C G A E ++ G
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSL 256
+ ++Y LI G CK L+L ++++ P+ + Y+ ++ +L
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 99 NRLLQMHPTPSIIEFS-----MILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
+R ++H EF ++ +L S L Q +G+ P + LI+
Sbjct: 197 DRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLIS 256
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C +G V+ ++ + P+ I ++KGLC+ A ++ +G+
Sbjct: 257 GFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAP 316
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V Y T+I G C+ G +A +L ++ +G PN Y+ +I K +S Y
Sbjct: 317 DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFY 376
Query: 270 SEMV 273
+EM+
Sbjct: 377 NEML 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 14/173 (8%)
Query: 94 AVSFFNRLLQMHP-TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
++ FF L + TP + +++ +LL K A S ++ G +P+ +
Sbjct: 96 SLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSF---LDTTGFKPEPTLLEQYV 152
Query: 153 NCYCHLGQLTSAFSVMGNILKR-GYQPNTIILNTLMKGLCLKG-MVQRAMEFHDDVVAQG 210
C G + A V N+LK G + + N+++ G CLK + R E H ++V
Sbjct: 153 KCLSEEGLVEEAIEVY-NVLKDMGISSSVVTCNSVLLG-CLKARKLDRFWELHKEMVESE 210
Query: 211 FRLDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKV 259
F D LI LC GD LL+Q +G P +Y+ +I C++
Sbjct: 211 F--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEI 261
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 4/193 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + + M P+++ ++ IL + +A + +M +G PD T ++L++
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC LG+ + A +VM ++ K +PN + +++ LC + A D+++ + F
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +I+ LC+ A L R++ P+ + ST+I LCK V++A L+
Sbjct: 330 DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF 389
Query: 270 SEMVAGEFHLMLS 282
E G +L+
Sbjct: 390 DEFEKGSIPSLLT 402
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 117 LTSLLKMKHYSTAISLSHQM-----ELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNI 171
L +LL + + L H M E GI P+I T ++L+ C + SA+ V+ I
Sbjct: 158 LNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEI 217
Query: 172 LKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDT 231
G PN + T++ G +G ++ A ++++ +G+ D +Y L++G CK G
Sbjct: 218 PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRF 277
Query: 232 RAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
A ++ +E PN + Y +I +LCK K +A +++ EM+ F
Sbjct: 278 SEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 7/187 (3%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP+I ++++ +L K +A + ++ G+ P++VT + ++ Y G + SA
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
V+ +L RG+ P+ LM G C G A DD+ +EV+Y +I LC
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 227 ---KTGDTRAAL-RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF---HL 279
K+G+ R +L + P+ + +ID+LC+ V +A L+ +M+ +
Sbjct: 308 KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 367
Query: 280 MLSLIMH 286
+LS ++H
Sbjct: 368 LLSTLIH 374
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + ++L+ + P S ++ L K + A L + E KG P ++T + LI
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLI 407
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G+LT A + ++ +R +PN N L++GL G V+ + ++++ G
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF 467
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL 238
++ ++ L GL K G A++++
Sbjct: 468 PNKTTFLILFEGLQKLGKEEDAMKIV 493
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 74/140 (52%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ F+++ ++ +ME +G PD+VT + L++ YC G+L AF +
Sbjct: 234 PNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYL 293
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ +R P+ + +L+KGLC G V+ A + +V +G + D +SY TLI CK
Sbjct: 294 YKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCK 353
Query: 228 TGDTRAALRLLRQIEGPNVI 247
G + + +LL ++ G +V+
Sbjct: 354 EGMMQQSKKLLHEMLGNSVV 373
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 140 GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRA 199
GI P+ T +IL N +C+ + + + G++P+ + NTL+ C +G ++ A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 200 MEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAA----LRLLRQIEGPNVIMYSTIIDS 255
+ + + D V+Y +LI GLCK G R A R++ + P+ + Y+T+I +
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 256 LCKVKLVSDAYDLYSEMVAG 275
CK ++ + L EM+
Sbjct: 351 YCKEGMMQQSKKLLHEMLGN 370
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
F M++ LK+ + ++ G +VT + L+N L + + V +
Sbjct: 169 FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMC 228
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ G PNT N L C + +F + + +GF D V+Y TL++ C+ G +
Sbjct: 229 RVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLK 288
Query: 233 AALRL----LRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
A L R+ P+++ Y+++I LCK V +A+ + MV
Sbjct: 289 EAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
F ++ + P ++ ++ +++S + A L M + + PD+VT + LI
Sbjct: 257 DFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGL 316
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
C G++ A ++ RG +P+ + NTL+ C +GM+Q++ + +++ D
Sbjct: 317 CKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDR 376
Query: 216 VSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIID----SLCKVKLVSDAYDLYSE 271
+ ++ G + G +A+ + ++ V + + D SLC+ A L
Sbjct: 377 FTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDR 436
Query: 272 MVAGEFH 278
++ E H
Sbjct: 437 IIEEEGH 443
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 13/182 (7%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + + + P ++ ++ ++ L K A H+M +GI+PD ++ + LI
Sbjct: 289 EAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLI 348
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
YC G + + ++ +L P+ +++G +G + A+ F V + R
Sbjct: 349 YAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNF----VVELRR 404
Query: 213 LD-EVSYAT---LINGLCKTGDTRAALRLLRQI---EGPNVI--MYSTIIDSLCKVKLVS 263
L ++ + LI LC+ G AA LL +I EG Y+ +I+SL + +
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIE 464
Query: 264 DA 265
+A
Sbjct: 465 EA 466
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + ++ ++ L K H A+ + KG R D + S +++ C G+++ A +
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 168 MGNILKRGY-QPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ +L +G+ P+ + ++ G C G V +A + + G + + VSY L+NG+C
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC 500
Query: 227 KTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
+TG + A ++ E PN I YS I+ L + +S+A D+ EMV F
Sbjct: 501 RTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 555
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F R+ + P+++ ++ ++ + AI L M KG PD V+ ++
Sbjct: 296 ALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMG 355
Query: 154 CYCHLGQLTSAFSVMGNILKR-GYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C ++ +M + K G P+ + NTL+ L A+ F D +GFR
Sbjct: 356 YLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFR 415
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG---PNVIMYSTIIDSLCKVKLVSDAYD 267
+D++ Y+ +++ LCK G A L+ ++ +G P+V+ Y+ +++ C++ V A
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKK 475
Query: 268 L 268
L
Sbjct: 476 L 476
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 99/187 (52%), Gaps = 8/187 (4%)
Query: 95 VSFFNRLLQ-MHP---TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSI 150
V +LLQ MH P+ + ++ +L + + A + + E P+ +T S+
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 529
Query: 151 LINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
+++ G+L+ A V+ ++ +G+ P + +N L++ LC G A +F ++ + +G
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 211 FRLDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAY 266
++ V++ T+I+G C+ + AAL +L + + +V Y+T++D+L K +++A
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEAT 649
Query: 267 DLYSEMV 273
+L +M+
Sbjct: 650 ELMKKML 656
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ + + P+++ + + ++ A+ +M++ GI P++VT + +I
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ-GF 211
YC L ++ A ++ ++ +G P+ + T+M LC + + + + + G
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYD 267
D+V+Y TLI+ L K AL L+ + + + YS I+ +LCK +S+A D
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD 439
Query: 268 LYSEMVA 274
L +EM++
Sbjct: 440 LINEMLS 446
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 5/185 (2%)
Query: 93 DAVSFFNRLL-QMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
+A N +L + H P ++ ++ ++ ++ A L M G +P+ V+ + L
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
+N C G+ A +M + + PN+I + +M GL +G + A + ++V +GF
Sbjct: 496 LNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 555
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYD 267
V L+ LC+ G T A + + + NV+ ++T+I C+ + A
Sbjct: 556 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 615
Query: 268 LYSEM 272
+ +M
Sbjct: 616 VLDDM 620
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P+ I +S+I+ L + S A + +M LKG P V ++L+ C G+ A
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
M L +G N + T++ G C + A+ DD+ D +Y TL++ L
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 227 KTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
K G A L++++ +G P + Y T+I C++ V D + +M++
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
Query: 104 MHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTS 163
++ TP FS ++ S + A+ + M+ G+ P+++ + I+ + +L
Sbjct: 238 IYRTPEA--FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEK 295
Query: 164 AFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLIN 223
A + + G PN + N +++G C V+ A+E +D+ ++G D+VSY T++
Sbjct: 296 ALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMG 355
Query: 224 GLCKTG---DTRAALRLLRQIEG--PNVIMYSTIIDSLCK 258
LCK + R ++ + + G P+ + Y+T+I L K
Sbjct: 356 YLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 136 MELKGI-RPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKG 194
M+ +GI R S ++++ Y GQL A V+ + + G +PN +I NT +
Sbjct: 233 MKRRGIYRTPEAFSRVMVS-YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRAN 291
Query: 195 MVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYS 250
+++A+ F + + G + V+Y +I G C A+ LL + P+ + Y
Sbjct: 292 RLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYY 351
Query: 251 TIIDSLCKVKLVSDAYDLYSEMV 273
TI+ LCK K + + DL +M
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMA 374
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S + + ++ + ++ ++ +L K + A L +M KGI P VT +I+
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC +G++ +++ ++ R Q I N +++ LC+ G ++ A V+ R
Sbjct: 673 RYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRS 730
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCK 258
D + L+ G K G +A ++ ++ N+I + + L K
Sbjct: 731 DAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSK 775
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQM-ELKGIRPDIVTSSIL 151
DA+ F+ +++ P+ + F ++ L K A+ + H M ++ G+RP + + L
Sbjct: 170 DALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASL 229
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I C +G+L+ AF + + + + I +TL+ L G +++ +G
Sbjct: 230 IKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGC 289
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYD 267
+ D V+Y LING C D+ +A R+L ++ +G P+VI Y+ I+ ++K +A
Sbjct: 290 KPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATY 349
Query: 268 LYSEM 272
L+ +M
Sbjct: 350 LFEDM 354
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + +++++ +A + +M KG++PD+++ ++++ + + + A +
Sbjct: 291 PDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYL 350
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
++ +RG P+T+ + GLC + A D+++ +G++ + LC+
Sbjct: 351 FEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCE 410
Query: 228 TGD----TRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+G ++ L R I G + ++S +I ++CK ++SD+ DL
Sbjct: 411 SGKLEILSKVISSLHRGIAG-DADVWSVMIPTMCKEPVISDSIDL 454
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 159 GQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSY 218
G+L + +I + G +P+ N L+ G G A++ D++V + + V++
Sbjct: 132 GELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 219 ATLINGLCKTGDTRAALRL---LRQIEG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
TLI+GLCK + AL++ + ++ G P V +Y+++I +LC++ +S A+ L E
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAY 250
Query: 274 AGEFHL 279
G+ +
Sbjct: 251 EGKIKV 256
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 22/197 (11%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + +M P+P+ + ++ ++ L + + A+ L + M GIRP+ VT +I+++
Sbjct: 175 ADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVH 234
Query: 154 CYCHLGQLTSAFSVMGNILKR----------GYQPNTIILNTLMKGLCLK-GMVQRAMEF 202
C G V+GN K+ P I++ T++ C K G V +A+E
Sbjct: 235 ALCQKG-------VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEV 287
Query: 203 HDDVVAQGFRLDEVSYATLINGLCKTGDTRAA----LRLLRQIEGPNVIMYSTIIDSLCK 258
++ + D V Y +I GLC +G+ AA ++++ P+V Y+T+I +LCK
Sbjct: 288 WKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCK 347
Query: 259 VKLVSDAYDLYSEMVAG 275
+A DL+ M G
Sbjct: 348 EGKFDEACDLHGTMQNG 364
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Query: 103 QMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLT 162
Q + I+ ++++ S K + A+ + +M K + D V +++I C G +
Sbjct: 258 QANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMV 317
Query: 163 SAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
+A+ M +++KRG P+ NTL+ LC +G A + H + G D++SY +I
Sbjct: 318 AAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVII 377
Query: 223 NGLCKTGDTRAALRL----LRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
GLC GD A L+ P V++++ +ID + S A + + M++
Sbjct: 378 QGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLS 433
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ +++++ + S+A+S+ + M G++P++ T++ LI+ Y G+L A+ V
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ P+T N L+ C G ++ A + +D+++ +G + D ++Y L+ GLC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 228 TGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
G + A LL +I+ + + + + +++ +AY +Y + +A
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLA 573
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 4/189 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ + + Q + + +++I+ L + A M +G+ PD+ T + LI+
Sbjct: 284 ALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLIS 343
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G+ A + G + G P+ I +++GLC+ G V RA EF ++
Sbjct: 344 ALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLP 403
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ + + +I+G + GDT +AL +L + PNV + +I K + DA+ +
Sbjct: 404 EVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVK 463
Query: 270 SEMVAGEFH 278
+EM + + H
Sbjct: 464 NEMRSTKIH 472
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 114 SMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILK 173
S I+ L A+ L +M G+ P ++T + L+N C G + A ++ + +
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 174 RGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTG---- 229
G PN + NTL+KGLC V +A+ + + G R + V+ +++ LC+ G
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 230 DTRAALRLL---RQIEGP-NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ + L + Q P ++++ + ++DS K V A +++ EM
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 11/188 (5%)
Query: 98 FNRLLQMHPT-------PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSI 150
F+ +H T P I + +I+ L + A M + P+++ ++
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 151 LINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
+I+ Y G +SA SV+ +L G +PN N L+ G G + A +++ +
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTK 470
Query: 211 FRLDEVSYATLINGLCKTGDTRAALRL----LRQIEGPNVIMYSTIIDSLCKVKLVSDAY 266
D +Y L+ C G R A +L LR+ P++I Y+ ++ LC + A
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAE 530
Query: 267 DLYSEMVA 274
L S + A
Sbjct: 531 SLLSRIQA 538
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 182 ILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQI 241
I +++M+ LCL+G + A+ ++ G +++ L+NGLCK G A L+R++
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 242 E----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
PN + Y+T+I LC V V A L++ M
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM 217
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 55/230 (23%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A +FN + ++ TP+++ ++ ++ + LK K S A L M +G P+IVT S LI+
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 154 CYCHLGQLTSAFSVM-------------------------------GNILK--------- 173
+C GQ+ A + G +L
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 174 -----------RGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
G +PN I+ + L+ GLC G + A E ++ GF +Y++LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 223 NGLCKTGDTRAALRLL-RQIE---GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ K A ++L + +E PNV++Y+ +ID LCKV +AY L
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F NR+ P+++ +S +L L K + + M ++G P + L+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLK------GMVQRAMEFHDDV 206
+ YC G + A+ ++ ++K G+ P ++ N L+ +C ++ A + + ++
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 207 VAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLV 262
+A G L++++ ++ LC G A ++R++ G P+ YS +++ LC +
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 263 SDAYDLYSEMVAG 275
A+ L+ EM G
Sbjct: 500 ELAFLLFEEMKRG 512
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 20/185 (10%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P +S +L L A L +M+ G+ D+ T +I+++ +C G + A
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G PN + L+ V A E + ++++G + V+Y+ LI+G CK
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 228 TGDTRAALRLLRQI--------------------EGPNVIMYSTIIDSLCKVKLVSDAYD 267
G A ++ ++ E PNV+ Y ++D CK V +A
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 268 LYSEM 272
L M
Sbjct: 661 LLDAM 665
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 39/218 (17%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A +++L+ P+++ ++ ++ L K+ A L ME KG +P++VT + +I+
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDV------- 206
+ +G++ + ++ + +G PN + L+ C G + A +++
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 207 -------VAQGFR---------LDEVS----------YATLINGLCKTGDTRAALRLLRQ 240
V +GF LDE+ Y LI+ L K ALRLL +
Sbjct: 848 HTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907
Query: 241 IEGPNVIM------YSTIIDSLCKVKLVSDAYDLYSEM 272
+ + + Y+++I+SLC V A+ L+SEM
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 945
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ I + ++ L K+ A + +M G + T S LI+ Y + + A V
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ +L+ PN +I ++ GLC G A + + +G + + V+Y +I+G
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G L LL ++ PN + Y +ID CK + A++L EM
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 135 QMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKG 194
+M G+ + + S C C G+ AFSV+ ++ +G+ P+T + ++ LC
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 195 MVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYS 250
++ A +++ G D +Y +++ CK G A + ++ PNV+ Y+
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 251 TIIDSLCKVKLVSDAYDLYSEMVA 274
+I + K K VS A +L+ M++
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLS 581
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
I S L Y A S+ +M +G PD T S ++N C+ ++ AF +
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
+ + G + ++ C G++++A ++ +++ G + V+Y LI+ K
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Query: 231 TRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
A L + EG PN++ YS +ID CK V A ++ M +
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 105 HPTPSII-EFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTS 163
H P+ + +S ++ K+K A + +M P++V + +I+ C +G+
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 164 AFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLIN 223
A+ +M + ++G QPN + ++ G + G ++ +E + + ++G + V+Y LI+
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 224 GLCKTGDTRAALRLLRQIE 242
CK G A LL +++
Sbjct: 823 HCCKNGALDVAHNLLEEMK 841
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 48/227 (21%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ RL PS ++ ++ + LK +A + +M L +R D T
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C +G+ A ++ + + P+T+ L+ GLC + + AM+F + + A
Sbjct: 279 SLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 214 DEVSYATLING-----------------------------------LCKTGDTRAALRLL 238
+ V+Y+TL+ G C +GD A +LL
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 239 RQIEG----PNVIMYSTIIDSLC--KVKLVSDAYDL----YSEMVAG 275
+++ P ++Y+ +I S+C K L D DL YSEM+A
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Query: 149 SILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVA 208
++L+ +C G + A +G + ++P+ N L++ + A H ++
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 209 QGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG--PNVIMYSTIIDSLCKVKLVSDAY 266
R+D + LCK G R AL L+ + E P+ + Y+ +I LC+ L +A
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLV-ETENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 267 DLYSEMVA 274
D + M A
Sbjct: 323 DFLNRMRA 330
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 94/180 (52%), Gaps = 4/180 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F RL + TP+++ + ++ K+ S A+ +S M+ +G++ ++ T S++IN +
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
L +AF+V +++K G +P+ I+ N ++ C G + RA++ ++ R +
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 218 YATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+ +I+G K+GD R +L + + P V ++ +I+ L + + + A ++ EM
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ I+ + A +++ +G+ DI T L+ C G++ SA +V +
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
R N+ + N L+ G +G V A + + +G + D +Y + I+ K GD
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781
Query: 233 AALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
A + + ++E PN+ Y+T+I + L A Y EM A
Sbjct: 782 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 827
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 83/185 (44%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
++ F+ + + P++ F+ ++ L++ + A+ + +M L G+ + T + ++
Sbjct: 608 SLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y +G AF + G + L+K C G +Q A+ ++ A+
Sbjct: 668 GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 727
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ Y LI+G + GD A L++Q+ EG P++ Y++ I + K ++ A
Sbjct: 728 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 787
Query: 270 SEMVA 274
EM A
Sbjct: 788 EEMEA 792
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 8/199 (4%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ + ++ P+ F I+ K ++ + M G P + T + LIN
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN 632
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Q+ A ++ + G N +M+G G +A E+ + +G +
Sbjct: 633 GLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLY 269
D +Y L+ CK+G ++AL + +++ N+ +Y+ +ID + V +A DL
Sbjct: 693 DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLI 752
Query: 270 SEM----VAGEFHLMLSLI 284
+M V + H S I
Sbjct: 753 QQMKKEGVKPDIHTYTSFI 771
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 81/181 (44%), Gaps = 5/181 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A +F RL I + +L + K +A++++ +M + I + +ILI+
Sbjct: 678 AFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILID 737
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ G + A ++ + K G +P+ + + G + RA + +++ A G +
Sbjct: 738 GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKP 797
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ +Y TLI G + AL +++ P+ +Y ++ SL +++AY +Y
Sbjct: 798 NIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY-IY 856
Query: 270 S 270
S
Sbjct: 857 S 857
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 4/180 (2%)
Query: 97 FFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYC 156
+F+ ++H T + + I+ + + + A +L +ME +GI I +++ Y
Sbjct: 401 WFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYT 460
Query: 157 HLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEV 216
+ V + + G+ P + L+ G + +A+E + +G + +
Sbjct: 461 MVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLK 520
Query: 217 SYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+Y+ +ING K D A + + EG P+VI+Y+ II + C + + A EM
Sbjct: 521 TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F+++ + P I ++++L + + ++ +M+ +G PD+V I+I
Sbjct: 215 DAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIII 274
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C + A + +R +P+ I +L+ GL + + A+EF + + GF
Sbjct: 275 NAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFP 334
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
L+ +Y L+ C + A + + ++ GPN Y I+ L +++ +AY++
Sbjct: 335 LEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEV 394
Query: 269 YSEM 272
Y M
Sbjct: 395 YQTM 398
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 4/171 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
F++I + + AI H+ME G + + + +++ + A V +
Sbjct: 165 FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMK 224
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
K+ ++P+ L++G + + R E + ++ +GF D V+Y +IN CK
Sbjct: 225 KKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYE 284
Query: 233 AALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHL 279
A+R ++E P+ ++ ++I+ L K ++DA + + + F L
Sbjct: 285 EAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPL 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ FFN + Q + PS F ++ L K + A+ + + G + T + L+
Sbjct: 285 EAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALV 344
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNT----IILNTLMKGLCLKGMVQRAMEFHDDVVA 208
YC ++ A+ + + +G PN IIL+ L++ +QR+ E ++
Sbjct: 345 GAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR-------MQRSKEAYEVYQT 397
Query: 209 QGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSD 264
+Y ++ C A+++ +++G V+ M+S++I +LC + +
Sbjct: 398 MSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDE 457
Query: 265 AYDLYSEMV 273
A + ++EM+
Sbjct: 458 ACEYFNEML 466
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A S R PS+I ++ ILT L KM A+ + +M+ K P++ T +ILI
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILI 384
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C G+L +AF + ++ K G PN +N ++ LC + A +++ +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDL 268
DE+++ +LI+GL K G A ++ ++ N I+Y+++I + D + +
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 269 YSEMV 273
Y +M+
Sbjct: 505 YKDMI 509
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 4/191 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + ++L + I ++ ++ + + M + PD+ + +
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+C G+ ++ I R + P+ + L+ GL G E + QG
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
LD +Y +I+G CK G A +LL +++ P V+ Y ++ID L K+ + +AY L
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 269 YSEMVAGEFHL 279
+ E + L
Sbjct: 645 FEEAKSKRIEL 655
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
+ F + P +S+++ L+K + L + M+ +G D +I+I+ +
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
C G++ A+ ++ + +G++P + +++ GL + A ++ ++ L+
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 216 VSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDA 265
V Y++LI+G K G A +L ++ +G PN+ +++++D+L K + +++A
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 3/182 (1%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S + + I+ +++ + S K+ A H++E G++PD VT + +I
Sbjct: 222 ALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C +L A + ++ K P T NT++ G G A + A+G
Sbjct: 282 VLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE---GPNVIMYSTIIDSLCKVKLVSDAYDLYS 270
++Y ++ L K G AL++ +++ PN+ Y+ +ID LC+ + A++L
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 271 EM 272
M
Sbjct: 402 SM 403
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A L+Q TP++ ++ +L +L+K + + A+ M+ P+ VT ILI
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N C + + AF + K+G +P+TI T++ GL G + A D A G
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ 240
D Y +I GL A L +
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 6/191 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPD-IVTSSIL 151
+A + F + TP I F ++ L K+ A + +M R + IV +S++
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
N + H G+ + +++ + P+ +LNT M + G ++ +++ A+ F
Sbjct: 490 KNFFNH-GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIM----YSTIIDSLCKVKLVSDAYD 267
D SY+ LI+GL K G L ++ ++ Y+ +ID CK V+ AY
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 268 LYSEMVAGEFH 278
L EM F
Sbjct: 609 LLEEMKTKGFE 619
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 39/203 (19%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+++ + ++ L K+ A L + + K I ++V S LI+ + +G++ A+ +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 168 MGNILKRGYQPNTIILNTLM-----------------------------------KGLCL 192
+ ++++G PN N+L+ GLC
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 193 KGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIM 248
+A F ++ QG + +SY T+I+GL K G+ A L + + P+
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 249 YSTIIDSLCKVKLVSDAYDLYSE 271
Y+ +I+ L DA+ L+ E
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEE 822
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D + ++ + +P + + + + K ++ +++ + PD + SILI
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G + + ++ ++G +T N ++ G C G V +A + +++ +GF
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDL 268
V+Y ++I+GL K A L + + NV++YS++ID KV + +AY +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 269 YSEMV 273
E++
Sbjct: 680 LEELM 684
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+++++ K + A L +M+ KG P +VT +I+ + +L A+ +
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ + N +I ++L+ G G + A ++++ +G + ++ +L++ L K +
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 233 AALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
AL + ++ PN + Y +I+ LCKV+ + A+ + EM
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 4/165 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ ++ ++ + + H ++L QM+ G P + + LI + G++ SA S+
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + + ++ N + G V A +F ++ A G + DEV+Y ++I LCK
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
A+ + +E P Y+T+I +AY L
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 95 VSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINC 154
++ F ++ ++ P++ F+ ++ K +A+SL +M+ + DIV ++ I+
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 155 YCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLD 214
+ +G++ A+ I G +P+ + +++ LC + A+E + +
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 215 EVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYS 270
+Y T+I G G A LL + P+VI Y+ I+ L K+ V +A ++
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 271 EM 272
EM
Sbjct: 368 EM 369
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
Query: 141 IRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAM 200
RP + LI + + ++ + + GY+P + TL++G +G V A+
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 201 EFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSL 256
D++ + D V Y I+ K G A + +IE P+ + Y+++I L
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 257 CKVKLVSDAYDLYSEM 272
CK + +A +++ +
Sbjct: 284 CKANRLDEAVEMFEHL 299
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV F + + P+ + ++ ++ + K K Y A L QM +G +PDIVT ILI+
Sbjct: 364 AVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH 423
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
G + A ++ ++ RG P+ I N LM GLC G A +++ +
Sbjct: 424 GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILP 483
Query: 214 DEVSYATLINGLCKTGDTRAALRLLR-QIEGP---NVIMYSTIIDSLCKVKLVSDAYDLY 269
D YATLI+G ++GD A ++ +E +V+ ++ +I C+ ++ +A
Sbjct: 484 DAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACM 543
Query: 270 SEMVAGEFHLM 280
+ M E HL+
Sbjct: 544 NRM--NEEHLV 552
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV+ +L+ +P ++M+++ L K + A L +M + I PD + LI
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + G A V +++G + + + N ++KG C GM+ A+ + + +
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
D+ +Y+T+I+G K D A+++ R +E PNV+ Y+++I+ C A +
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612
Query: 269 YSEM 272
+ EM
Sbjct: 613 FKEM 616
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 86/167 (51%), Gaps = 5/167 (2%)
Query: 94 AVSFFNRLLQMHPT-PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
AV ++ +++++ + P +I + +L+ L+K + A + +M +G D ++ IL+
Sbjct: 153 AVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILV 212
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C+ G++ ++ +G PN + NT++ G C G ++ A ++ +GF
Sbjct: 213 KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFM 272
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDS 255
++ T+ING CK GD A+ RLL +++ +V + IID+
Sbjct: 273 PTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+I+ ++ I+ K+ A + +++LKG P + T +IN +C G ++ +
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + +RG + + LN ++ G E ++A + D +Y LIN LCK
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
G A+ L + PN + Y+ +I + CK K YD+ S+++
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK----EYDIASKLL 403
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + +++++ L K A+ + KG+ P+ ++ + LI YC + A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + +RG +P+ + L+ GL + G + A+ ++ +G D Y L++GLCK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYS 270
TG A L ++ P+ +Y+T+ID + +A ++S
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A++ NR+ + H P +S I+ +K + +TAI + ME +P++VT + LI
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLK-GMVQRAMEFHDDVVAQGF 211
N +C G A + R PN + TL++ L + +++A+ + + ++
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKC 657
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEGPN 245
+EV++ L+ G K + + ++L + +G N
Sbjct: 658 VPNEVTFNCLLQGFVK----KTSGKVLAEPDGSN 687
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 140 GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRA 199
GI PDIVT+S L+N +C + A V G + K G + + ++ L+ LC +V A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 200 MEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDS 255
+E + +G + V+Y++LI GLCK+G A R L +++ PNVI +S +ID+
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 256 LCKVKLVSDAYDLYSEMV 273
K +S +Y M+
Sbjct: 128 YAKRGKLSKVDSVYKMMI 145
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ R+ +P+++ +S ++T L K + A H+M+ K I P+++T S LI+
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y G+L+ SV +++ PN ++L+ GLC+ V A++ D ++++G
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V+Y+TL NG K+ ++LL + V + ++L K + DL
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
S + ++QM P++ +S ++ L AI + M KG P++VT S L N +
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
++ ++ ++ +RG NT+ NTL+KG G + A+ + + G +
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 216 VSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDLYSE 271
SY ++ GL G+ AL ++ ++I Y+ +I +CK +V +AYDL+ +
Sbjct: 259 RSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYK 318
Query: 272 M 272
+
Sbjct: 319 L 319
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
+++++ P I+ S ++ A+ ++ QME GI+ D+V +ILI+ C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
+ A V+ + RG PN + ++L+ GLC G + A ++ ++ + ++++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 220 TLINGLCKTG---DTRAALRLLRQIE-GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
LI+ K G + +++ Q+ PNV YS++I LC V +A + M++
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ + ++ TP+++ +S + K I L M +G+ + V+ + LI
Sbjct: 171 EAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI 230
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
Y G++ A V G + G PN N ++ GL G V++A+ + +
Sbjct: 231 KGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRND 290
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDA 265
LD ++Y +I+G+CK + A L +++ P+ Y+ +I L + + ++A
Sbjct: 291 LDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
M ++K G +P+ + ++L+ G CL ++ A+ + G + D V LI+ LCK
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
AL +L++++ PNV+ YS++I LCK ++DA EM
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 109
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 94 AVSFFNRLLQMHP-TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
A+ F R+ ++ P+I ++ +L + ++ K + SL E G+ P++ T ++LI
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C + A + + K G++P+ +T++ L G + A+E D++ +G
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 213 LDEVSYATLINGLCKTGDTRAALRLL-RQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
D Y LI+G K D + A+ L R +E PNV ++ +I L K V D
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 268 LYSEMVAGE 276
++ M E
Sbjct: 277 IWERMKQNE 285
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A +F +L+ P + +S++L L + + A+ L HQ G+ D++ +ILI
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C +G+L A +VM N+ R N + NTLM+G G RA + G +
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Query: 213 LDEVSYATLINGLC 226
D +SY T++ GLC
Sbjct: 637 PDIISYNTIMKGLC 650
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 5/182 (2%)
Query: 95 VSFFNRLLQMHPT-PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
SFF R + + P+++ +++++ L K + A + +M G +PD+ T SIL+
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C ++ A + L+ G + + ++ N L+ GLC G + AM ++ +
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ V+Y TL+ G K GD+ A + + P++I Y+TI+ LC + VS A + +
Sbjct: 603 NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFF 662
Query: 270 SE 271
+
Sbjct: 663 DD 664
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQM-ELKGIRPDIVTSSIL 151
DA+ F+ + + P + +++++ LK K + TA+ L ++ E + P++ T +I+
Sbjct: 202 DALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIM 261
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I+ G++ + + + + + ++L+ GLC G V +A +++ +
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKA 321
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIE---GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+D V+Y T++ G C+ G + +L L R +E N++ Y+ +I L + + +A +
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMI 381
Query: 269 YSEMVA 274
+ M A
Sbjct: 382 WRLMPA 387
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A S FN L + + ++ ++ +L + ++ L ME K +IV+ +ILI
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIK 367
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
G++ A + + +GY + + GLC+ G V +A+ +V + G L
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSL 256
D +YA++I+ LCK A L++++ V + S + ++L
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
+ ++ I+ L K K A +L +M G+ + + LI +L A +
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
+ K G +P + N L+ GLC G A F +++ G++ D +Y+ L+ GLC+
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 229 GDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
AL L Q G +V+M++ +I LC V + DA + + M
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+ + + L + + A+ + ++E G D+ + +I+C C +L A +++ +
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
K G + N+ + N L+ GL + A F ++ G R VSY LI GLCK G
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFG 516
Query: 233 AALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
A ++++ P++ YS ++ LC+ + + A +L+ + +
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P++ ++ ++ +K A+ +M + +PD+ T +ILIN YC + A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++G +PN + NTL++G G ++ ++ +++ G R E + L++GLC+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 228 TGDTRAA----LRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G A L LL + P+ Y ++++ LC A ++ E+
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEEL 359
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F + + P+++ F+ ++ L + ++++M G R T IL++
Sbjct: 247 ALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVD 306
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G++ A ++ ++L + P+ +L++ LC + RAME +++ +G
Sbjct: 307 GLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDA 265
++ TL+ GL K+G T A + ++ P+ + ++ ++ LC +DA
Sbjct: 367 CFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDA 422
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F+ R+ + P + F++++ + + A+ L +M+ KG P++V+ + LI
Sbjct: 212 ALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ G++ + +++ G + + L+ GLC +G V A D++ +
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP 331
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
E Y +L+ LC A+ ++ ++ + P I +T+++ L K A
Sbjct: 332 SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFM 391
Query: 270 SEMV 273
+M+
Sbjct: 392 EKMM 395
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 152 INCYCHLGQLTSA---FSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVA 208
I+ YC ++ A F M ++ +PN + NT++ G G + +A+ F+ +
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGK 221
Query: 209 QGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSD 264
+ + D ++ LING C++ AL L R+++ PNV+ ++T+I + +
Sbjct: 222 ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEE 281
Query: 265 AYDLYSEMV 273
+ EM+
Sbjct: 282 GVKMAYEMI 290
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 101 LLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
LL P ++ ++ ++ +KM + A L + I P IVT + LI+ C G
Sbjct: 365 LLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 161 LTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYAT 220
L A + + + P+ I TL+KG G + A E +D+++ +G + D +Y T
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 221 LINGLCKTGDTRAALRLLRQI-----EGPNVIMYSTIIDSLCKV 259
G + GD+ A RL ++ P++ +Y+ ID LCKV
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 528
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + + +++ P++I F+ +L S K + +M+ + I VT +ILIN
Sbjct: 222 ASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILIN 281
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ G++ A G++ + G+ N L++G C +G+ A D+++ G
Sbjct: 282 GFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP 341
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+Y I LC G A LL + P+V+ Y+T++ K+ +A L+ ++
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 274 AGEFH 278
AG+ H
Sbjct: 402 AGDIH 406
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Query: 105 HPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSA 164
H P + +++ + L K+ + AI ++ G+ PD VT + +I Y GQ A
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569
Query: 165 FSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLING 224
++ +L++ P+ I L+ G G +++A ++ ++ +G R + +++ L+ G
Sbjct: 570 RNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 629
Query: 225 LCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
+CK G+ A R L ++E PN Y+ +I C + + LY EM+ E
Sbjct: 630 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE 685
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
F+ ++ K + A ++ +M GI P T +I I C G++ A ++ ++
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
P+ + NTLM G G A DD+ A V+Y TLI+GLC++G+
Sbjct: 371 ----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 233 AALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
A RL ++ P+VI Y+T++ K +S A ++Y EM+
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F ++ ++ P + ++ ++ L+ + A +L +M K + P ++T +LI
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 593
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ G+L AF + KRG +PN + N L+ G+C G + A + + +G
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPP 653
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI 241
++ SY LI+ C ++L +++
Sbjct: 654 NKYSYTMLISKNCDFEKWEEVVKLYKEM 681
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 4/181 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F ++++ PS+ +++L L + + A ++ M GI P ++T + +++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G L + + +R + + + N L+ G G ++ A FH D+ GF + S
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 218 YATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+ LI G CK G A + ++ P Y+ I +LC + DA +L S M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 274 A 274
A
Sbjct: 371 A 371
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRG 175
I + ++K Y A +M G++ V+ + LI+ YC G + A + + +G
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 176 YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL 235
QPN I N ++ C +G ++ A + ++ A G D +Y +LI+G C + A+
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM 559
Query: 236 RLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
RL + ++G N + Y+ +I L K +A+ LY EM
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 39/221 (17%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F+ + + + ++ +++ + + A L ++ KG+ P T LI
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF- 211
+ C +G++ +A +M + +G ++ NTL+ G C KGMV A +D + +GF
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 212 -----------------RLDE-----------------VSYATLINGLCKTGDTRAALRL 237
R DE VSY LI+ CK G+ A RL
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 238 LRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
++ PN I Y+ +I + CK + +A L + M A
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEA 532
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ I+ + +K + +S + M+ G+ + VT ++L+ G+++ A +
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ +RG + + + +L+ C KG ++RA D++ +G +Y LI+G+CK
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Query: 228 TGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFH 278
G+ AA L+ +++ V ++++T+ID C+ +V +A +Y M F
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 74/150 (49%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + R+++ S + ++ ++ K + A L +M KG++P+ +T +++I
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
YC G++ A + N+ G P++ +L+ G C+ V AM ++ +G
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE 242
+ V+Y +I+GL K G + A L +++
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKG-IRPDIVTSSILINCYCHLGQLTSAFSVMG 169
I F+ ++ L K+ A L +M+L+ P+ VT + LI+ YC G+L +A V+
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 170 NILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTG 229
+ + +PN + +NT++ G+C + A+ F D+ +G + + V+Y TLI+ C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 230 DTRAAL----RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHLML 281
+ A+ ++L P+ +Y +I LC+V+ DA + ++ G F L L
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 29/166 (17%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM---- 168
F+ +L+ L + S L +M+ IRPD+VT ILIN C ++ A V
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 169 ------GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE------V 216
GN++K ++I NTL+ GLC G ++ A E + +L+E V
Sbjct: 357 GKRTDDGNVIK----ADSIHFNTLIDGLCKVGRLKEAEE-----LLVRMKLEERCAPNAV 407
Query: 217 SYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCK 258
+Y LI+G C+ G A ++ +++ PNV+ +TI+ +C+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ ++L+ +P + +++ L +++ AI + +++ G D++ ++LI
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C + ++ ++ K G +P++I NTL+ + + + G
Sbjct: 555 LFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE-----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+Y +I+ C G+ AL+L + + PN ++Y+ +I++ K+ A L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 269 YSEM 272
EM
Sbjct: 675 KEEM 678
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV FF + + +++ + ++ + + + A+ +M G PD LI+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C + + A V+ + + G+ + + N L+ C K ++ E D+ +G +
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKP 579
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D ++Y TLI+ K D + R++ Q+ P V Y +ID+ C V + +A L+
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 270 SEM 272
+M
Sbjct: 640 KDM 642
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 102 LQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQL 161
L+ P+ + ++ ++ + TA + +M+ I+P++VT + ++ C L
Sbjct: 398 LEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 162 TSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATL 221
A ++ K G + N + TL+ C V++AM +++ ++ G D Y L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 222 INGLCKTGDTRAALRLLRQI-EGP---NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
I+GLC+ A+R++ ++ EG +++ Y+ +I C Y++ ++M
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM 572
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I ++ +++ K K + + + QM G+ P + T +I+ YC +G+L A +
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 168 MGNI-LKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ L PNT+I N L+ G +A+ +++ + R + +Y L L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 227 KTGDTRAALRLL----RQIEGPNVIMYSTIIDSL 256
+ L+L+ Q PN I +++ L
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 93 DAVSFFNRL-LQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
+A+ F + L P+ + +++++ + K+ ++ A+SL +M++K +RP++ T + L
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGL 190
C Q + +M ++++ +PN I + LM+ L
Sbjct: 694 FKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK-GIRPDIVTSSIL 151
+A L + H P ++ +L L K K +M ++PD+V+ +IL
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTIL 236
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I+ C+ L A ++ + G++P+ + NT+MKG C A+ + + +G
Sbjct: 237 IDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCK 258
D+++Y TLI GL K G A L+ + P+ Y+++++ +C+
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 65/122 (53%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ F++++ ++ K+ A+ L ++ G +PD + ++ +C L + + A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G +P+ I NTL+ GL G V+ A + +V G+ D +Y +L+NG+C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 228 TG 229
G
Sbjct: 348 KG 349
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Query: 93 DAVSFFNRLLQMHPT--PSIIEFSMILTSLLKMKHYSTAISLSHQ----MELKGIRPDIV 146
D V F +L+ P P F ++L+ + ++IS H+ M G+ PD V
Sbjct: 103 DTVKLFQHILKSQPNFRPGRSTFLILLSHACRAP--DSSISNVHRVLNLMVNNGLEPDQV 160
Query: 147 TSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDV 206
T+ I + C G++ A +M + ++ P+T N L+K LC + EF D++
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM 220
Query: 207 VAQ-GFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKL 261
+ D VS+ LI+ +C + + R A+ L+ ++ P+ +Y+TI+ C +
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 262 VSDAYDLYSEM 272
S+A +Y +M
Sbjct: 281 GSEAVGVYKKM 291
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 41/222 (18%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F + + P P++ F+ +L + A + QM+ G+ PDIV + L+
Sbjct: 220 EASKVFEDMREKFP-PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLL 278
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLC-LKGMVQRAMEFHDDVVAQGF 211
+ Y H G++ A+ +M ++ KRG++PN L++ LC + + AM ++ G
Sbjct: 279 SGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGC 338
Query: 212 RLDEVSYATLINGLCKTG----------DTR-------------------------AALR 236
D V+Y LI+G CK G D R L
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 237 LLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
L+ +++ P++++Y+ +I CK+ V +A L++EM A
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEA 440
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKM-KHYSTAISLSHQMELKGIRPDIVTSSIL 151
DA N + + P++ +++++ +L + K A+ + +ME G DIVT + L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I+ +C G + +SV+ ++ K+G P+ + +M K + +E + + +G
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
D + Y +I CK G+ + A+RL ++E P V + +I+ + +A +
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 268 LYSEMVA 274
+ EMV+
Sbjct: 469 HFKEMVS 475
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 9/174 (5%)
Query: 107 TPSIIE---FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTS 163
P +IE F +++ A+ + +M G+ PD L++ C G +
Sbjct: 161 NPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKE 220
Query: 164 AFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLIN 223
A V + ++ + PN +L+ G C +G + A E + G D V + L++
Sbjct: 221 ASKVFED-MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLS 279
Query: 224 GLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKV-KLVSDAYDLYSEM 272
G G A L+ + PNV Y+ +I +LC+ K + +A ++ EM
Sbjct: 280 GYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM 333
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKG-IRPDIVTSSILINCYCHLGQLTSAFSVMG 169
I F+ ++ L K+ A L +M+L+ P+ VT + LI+ YC G+L +A V+
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 170 NILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTG 229
+ + +PN + +NT++ G+C + A+ F D+ +G + + V+Y TLI+ C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 230 DTRAAL----RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHLML 281
+ A+ ++L P+ +Y +I LC+V+ DA + ++ G F L L
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 29/166 (17%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM---- 168
F+ +L+ L + S L +M+ IRPD+VT ILIN C ++ A V
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 169 ------GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE------V 216
GN++K ++I NTL+ GLC G ++ A E + +L+E V
Sbjct: 357 GKRTDDGNVIK----ADSIHFNTLIDGLCKVGRLKEAEE-----LLVRMKLEERCVPNAV 407
Query: 217 SYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCK 258
+Y LI+G C+ G A ++ +++ PNV+ +TI+ +C+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ ++L+ +P + +++ L +++ AI + +++ G D++ ++LI
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C + ++ ++ K G +P++I NTL+ + + + G
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE-----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+Y +I+ C G+ AL+L + + PN ++Y+ +I++ K+ A L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 269 YSEM 272
EM
Sbjct: 675 KEEM 678
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV FF + + +++ + ++ + + + A+ +M G PD LI+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C + + A V+ + + G+ + + N L+ C K ++ E D+ +G +
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D ++Y TLI+ K D + R++ Q+ P V Y +ID+ C V + +A L+
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 270 SEM 272
+M
Sbjct: 640 KDM 642
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 102 LQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQL 161
L+ P+ + ++ ++ + TA + +M+ I+P++VT + ++ C L
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 162 TSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATL 221
A ++ K G + N + TL+ C V++AM +++ ++ G D Y L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 222 INGLCKTGDTRAALRLLRQI-EGP---NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
I+GLC+ A+R++ ++ EG +++ Y+ +I C Y++ ++M
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I ++ +++ K K + + + QM G+ P + T +I+ YC +G+L A +
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 168 MGNI-LKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ L PNT+I N L+ G +A+ +++ + R + +Y L L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 227 KTGDTRAALRLLRQI 241
+ L+L+ ++
Sbjct: 699 EKTQGETLLKLMDEM 713
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKG-IRPDIVTSSILINCYCHLGQLTSAFSVMG 169
I F+ ++ L K+ A L +M+L+ P+ VT + LI+ YC G+L +A V+
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 170 NILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTG 229
+ + +PN + +NT++ G+C + A+ F D+ +G + + V+Y TLI+ C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 230 DTRAAL----RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHLML 281
+ A+ ++L P+ +Y +I LC+V+ DA + ++ G F L L
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 29/166 (17%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM---- 168
F+ +L+ L + S L +M+ IRPD+VT ILIN C ++ A V
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 169 ------GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE------V 216
GN++K ++I NTL+ GLC G ++ A E + +L+E V
Sbjct: 357 GKRTDDGNVIK----ADSIHFNTLIDGLCKVGRLKEAEE-----LLVRMKLEERCVPNAV 407
Query: 217 SYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCK 258
+Y LI+G C+ G A ++ +++ PNV+ +TI+ +C+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ ++L+ +P + +++ L +++ AI + +++ G D++ ++LI
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C + ++ ++ K G +P++I NTL+ + + + G
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE-----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
+Y +I+ C G+ AL+L + + PN ++Y+ +I++ K+ A L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 269 YSEM 272
EM
Sbjct: 675 KEEM 678
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV FF + + +++ + ++ + + + A+ +M G PD LI+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C + + A V+ + + G+ + + N L+ C K ++ E D+ +G +
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D ++Y TLI+ K D + R++ Q+ P V Y +ID+ C V + +A L+
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 270 SEM 272
+M
Sbjct: 640 KDM 642
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 102 LQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQL 161
L+ P+ + ++ ++ + TA + +M+ I+P++VT + ++ C L
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 162 TSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATL 221
A ++ K G + N + TL+ C V++AM +++ ++ G D Y L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 222 INGLCKTGDTRAALRLLRQI-EGP---NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
I+GLC+ A+R++ ++ EG +++ Y+ +I C Y++ ++M
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I ++ +++ K K + + + QM G+ P + T +I+ YC +G+L A +
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 168 MGNI-LKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ L PNT+I N L+ G +A+ +++ + R + +Y L L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 227 KTGDTRAALRLL----RQIEGPNVIMYSTIIDSL 256
+ L+L+ Q PN I +++ L
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 93 DAVSFFNRL-LQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
+A+ F + L P+ + +++++ + K+ ++ A+SL +M++K +RP++ T + L
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGL 190
C Q + +M ++++ +PN I + LM+ L
Sbjct: 694 FKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ +++ + + ++ + ++L K+K S L +M+ G PDI T +ILI
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +G++ A ++ + + +P+ I N+L+ L G V A ++ +G
Sbjct: 485 ASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y+TL+ KT A L + ++G PN++ Y+ ++D L K ++A DL
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDL 604
Query: 269 YSEM 272
YS+M
Sbjct: 605 YSKM 608
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A++ F L + P II ++ ++ L K A +M+ KG+ PD+VT S L+
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C+ ++ A+S+ +L +G QPN + N L+ L G A++ + + QG
Sbjct: 555 ECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLT 614
Query: 213 LDEVSYATL 221
D ++Y L
Sbjct: 615 PDSITYTVL 623
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
F ++ + P+P I +++++ S ++ AI++ ++E +PDI++ + LINC
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
G + A + ++G P+ + +TLM+ V+ A ++++ +G + +
Sbjct: 523 GKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 216 VSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTI 252
V+Y L++ L K G T A+ L +++ P+ I Y+ +
Sbjct: 583 VTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV FN ++ T +++ ++ ++ L K K AI + +M G RP+ T S+L+
Sbjct: 288 EAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL 347
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N GQL V+ I KR I + L++ L G V A D+ + +
Sbjct: 348 NLLVAEGQLVRLDGVV-EISKRYMTQG--IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVK 404
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAYDL 268
+ SY +++ LC G T A+ +L +I V+ MY+T+ +L K+K +S +DL
Sbjct: 405 GERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDL 464
Query: 269 YSEM 272
+ +M
Sbjct: 465 FEKM 468
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 4/162 (2%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRG 175
+L SL AI + ++ KG+ D + + + + L Q++ + + K G
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG 472
Query: 176 YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL 235
P+ N L+ G V A+ +++ + D +SY +LIN L K GD A
Sbjct: 473 PSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH 532
Query: 236 RLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
++++ P+V+ YST+++ K + V AY L+ EM+
Sbjct: 533 VRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEML 574
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
I ++M+L +L K + A + M+ + R D T +I+I +G+ A +
Sbjct: 237 DIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLF 293
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
++ G N + NTLM+ L MV +A++ +V G R +E +Y+ L+N L
Sbjct: 294 NEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE 353
Query: 229 GDTRAALRLLRQIEGPNVIM----YSTIIDSLCKVKLVSDAYDLYSEM----VAGEFHLM 280
G +RL +E M YS ++ +L K+ VS+A+ L+ +M V GE
Sbjct: 354 G---QLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSY 410
Query: 281 LSLI 284
+S++
Sbjct: 411 MSML 414
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK--GIRPDIVTSSIL 151
A+S+F + P F++I+ L K+ S A+ L + M K RPD+VT + +
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
++ Y G++ + +V ++ G +PN + N LM + GM A+ D+ G
Sbjct: 327 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 386
Query: 212 RLDEVSYATLINGLCKT---GDTRAALRLLR-QIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
D VSY L+N ++ G + ++R + PNV+ Y+ +ID+ +++A +
Sbjct: 387 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 268 LYSEM 272
++ +M
Sbjct: 447 IFRQM 451
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+++ ++ ++ + + A+ + QME GI+P++V+ L+ + + +V
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 482
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ RG NT N+ + +++A+ + + + + D V++ LI+G C+
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Query: 228 TGDTRAALRLLRQIEGPNVIM----YSTIIDSLCKVKLVSDAYDLYSEM 272
A+ L+++E ++ + YS+++ + K V++A ++++M
Sbjct: 543 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK--GIRPDIVTSSIL 151
A+S+F + P F++I+ L K+ S A+ L + M K RPD+VT + +
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 194
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
++ Y G++ + +V ++ G +PN + N LM + GM A+ D+ G
Sbjct: 195 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 254
Query: 212 RLDEVSYATLINGLCKT---GDTRAALRLLR-QIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
D VSY L+N ++ G + ++R + PNV+ Y+ +ID+ +++A +
Sbjct: 255 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 314
Query: 268 LYSEM 272
++ +M
Sbjct: 315 IFRQM 319
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+++ ++ ++ + + A+ + QME GI+P++V+ L+ + + +V
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 350
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ RG NT N+ + +++A+ + + + + D V++ LI+G C+
Sbjct: 351 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Query: 228 TGDTRAALRLLRQIEGPNVIM----YSTIIDSLCKVKLVSDAYDLYSEM 272
A+ L+++E ++ + YS+++ + K V++A ++++M
Sbjct: 411 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F L + P + ++M++ K+ AI L +M G PD++ + LI
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N ++ A+ + + + +P + NTL+ GL G +Q A+E + +V +G
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ +++ TL + LCK + AL++L ++ P+V Y+TII L K V +A
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665
Query: 269 YSEM 272
+ +M
Sbjct: 666 FHQM 669
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F ++ P+I+ + L SL K A + + ++ G+ PD VT ++++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
CY +G++ A ++ +++ G +P+ I++N+L+ L V A + + +
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCK 258
V+Y TL+ GL K G + A+ L + +G PN I ++T+ D LCK
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ + R++ PS+ +S ++ L K + + + L +ME G++P++ T +I I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
G++ A+ ++ + G P+ + L+ LC + A E + + +
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
D V+Y TL++ D + + ++E P+V+ ++ ++D+LCK +A+D
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ + +++ P +I + ++ +L K A + +M+ ++P +VT + L+
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
G++ A + ++++G PNTI NTL LC V A++ ++ G
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG---PNVIMYSTIIDSLCKVKLVSDAYDL 268
D +Y T+I GL K G + A+ Q++ P+ + T++ + K L+ DAY +
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 5/190 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F +L P+ +++++ K A +L +M +G+RPD+ T S+L+
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAME-FHDDVVAQGF 211
+C C +G++ + + G P+ + N ++ GL ++ A+ F++ ++G
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYD 267
D +Y +LI L G A ++ +I+ PNV ++ +I AY
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1088
Query: 268 LYSEMVAGEF 277
+Y MV G F
Sbjct: 1089 VYQTMVTGGF 1098
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 93 DAVSFFNRLLQMHP-TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
DA+ + L+ +P+ + ++ L K A L M G RP+ +IL
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
IN + G+ +A ++ ++K G +P+ + L+ LC+ G V + + ++ G
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIE-----GPNVIMYSTIIDSLCKVKLVSDAY 266
D V Y +INGL K+ AL L +++ P++ Y+++I +L +V +A
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAG 1052
Query: 267 DLYSEM 272
+Y+E+
Sbjct: 1053 KIYNEI 1058
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQ-MELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
+ I +++++ L+K + A+ L + M + P T LI+ G+L A +
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+L G +PN I N L+ G G A +V +G R D +Y+ L++ LC
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G L ++++ P+V+ Y+ II+ L K + +A L++EM
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P++ ++ ++ LL++ A+ L ME G++P T + I+ Y G SA
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ +G PN + N + L G + A + + G D V+Y ++ K
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 228 TGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G+ A++LL ++ G P+VI+ +++I++L K V +A+ ++ M
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 4/180 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ P + + +L + + +ME G PD+VT +IL++
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G AF + + +G PN NTL+ GL + A+E ++ + G +
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+Y I+ K+GD+ +AL +++ PN++ + + SL K +A ++
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 11/174 (6%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + +++++ LL+ A + Q++ G PD+ T + L++ Y G++ F +
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVA-QGFRLDEVSYATLINGLC 226
+ + NTI N ++ GL G V A++ + D+++ + F +Y LI+GL
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 227 KTGDTRAALRLLRQIEG-------PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
K+G A +L EG PN +Y+ +I+ K A L+ MV
Sbjct: 903 KSGRLYEAKQLF---EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMEL-KGIRPDIVTSSIL 151
+ + +F L + P ++ +++I+ L K A+ L ++M+ +GI PD+ T + L
Sbjct: 979 EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I G + A + I + G +PN N L++G L G + A + +V GF
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Query: 212 RLDEVSYATLIN 223
+ +Y L N
Sbjct: 1099 SPNTGTYEQLPN 1110
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
Query: 112 EFSMILTS---------LLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLT 162
EF +L + LLK + + A+ + +M L+G RP + T S L+ LG+
Sbjct: 181 EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM---VGLGKRR 237
Query: 163 SAFSVMGNILKR----GYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSY 218
SVMG +LK G +PN ++ L G + A E + +G D V+Y
Sbjct: 238 DIDSVMG-LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 219 ATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
LI+ LC A + +++ P+ + Y T++D + + +SEM
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK-GIRPDIVTSSIL 151
++V F + QM +PS++ F+ +L+ LLK A L +M G+ PD T + L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLC-----------LKGMVQRAM 200
IN +C + AF + ++ P+ + NT++ GLC L GM+++A
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT 275
Query: 201 EFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL----RLLRQIEGPNVIMYSTIIDSL 256
+ H +V VSY TL+ G C + A+ +L + PN + Y+T+I L
Sbjct: 276 DVHPNV---------VSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Query: 257 CKVKLVSDAYDL 268
+ + D+
Sbjct: 327 SEAHRYDEIKDI 338
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 43/213 (20%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP F+ ++ K A + MEL PD+VT + +I+ C G++ A +
Sbjct: 206 TPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHN 265
Query: 167 VMGNILKRG--YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLING 224
V+ +LK+ PN + TL++G C+K + A+ D++++G + + V+Y TLI G
Sbjct: 266 VLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG 325
Query: 225 L-------------------------------------CKTGDTRAALRLLRQIEG---- 243
L C G AA+++ +++
Sbjct: 326 LSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH 385
Query: 244 PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
P+ YS +I +LC A L++E+ E
Sbjct: 386 PDSASYSVLIRTLCMRNEFDRAETLFNELFEKE 418
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 126 YSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKR-GYQPNTIILN 184
+ ++ L M+ GI P ++T + L++ G+ A + + + G P++ N
Sbjct: 154 FQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFN 213
Query: 185 TLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG- 243
TL+ G C MV A D+ D V+Y T+I+GLC+ G + A +L +
Sbjct: 214 TLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKK 273
Query: 244 -----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
PNV+ Y+T++ C + + +A ++ +M++
Sbjct: 274 ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLS 309
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P F++++ + H A+ + +M + PD + S+LI C + A ++
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 168 MGNILKRGY-------QPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYAT 220
+ ++ +P N + + LC G ++A + ++ +G + D SY T
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKT 469
Query: 221 LINGLCKTGDTRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM---- 272
LI G C+ G + A LL R+ P++ Y +ID L K+ A+D M
Sbjct: 470 LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSS 529
Query: 273 ---VAGEFHLMLS 282
VA FH +L+
Sbjct: 530 YLPVATTFHSVLA 542
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 39/195 (20%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKG--IRPDIVTSSI 150
+A F + H P ++ ++ I+ L + A ++ M K + P++V+ +
Sbjct: 227 EAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 151 LINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGL-------------------- 190
L+ YC ++ A V ++L RG +PN + NTL+KGL
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAF 346
Query: 191 -----------------CLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRA 233
C G + AM+ +++ D SY+ LI LC +
Sbjct: 347 TTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDR 406
Query: 234 ALRLLRQIEGPNVIM 248
A L ++ V++
Sbjct: 407 AETLFNELFEKEVLL 421
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGI-------RPDIV 146
A+ F +L M P +S+++ +L + A +L +++ K + +P
Sbjct: 372 AMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAA 431
Query: 147 TSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDV 206
+ + C G+ A V ++KRG Q + TL+ G C +G + A E +
Sbjct: 432 AYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLM 490
Query: 207 VAQGFRLDEVSYATLINGLCKTGDTRAA----LRLLRQIEGPNVIMYSTIIDSLCKVKLV 262
+ + F D +Y LI+GL K G+ A R+LR P + +++ L K K
Sbjct: 491 LRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFA 550
Query: 263 SDAYDLYSEMV 273
++++ L + M+
Sbjct: 551 NESFCLVTLML 561
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I ++ +L++ + + A+ + ME +PD+ T + +I+ Y G A +
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ +G+ P+ + N+L+ + ++ E + + GF DE++Y T+I+ K
Sbjct: 355 FMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 228 TGDTRAALRLLRQIEG-----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
G AL+L + ++G P+ I Y+ +IDSL K +A L SEM+
Sbjct: 415 QGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ I+ + K K + A S+ + G PD+ T + L++ Y G A ++ ++
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ G P +N L+ LC+ G ++ +++ GF++ + S +++ + G+
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 233 AALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHLMLSL 283
++ ++ P + +Y +I+ LCK K V DA + SEM F + L++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAI 929
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 126 YSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTS--AFSVMGNILKRGYQPNTIIL 183
+S A L M +G PD+++ + LIN G LT A ++ + G +P+ I
Sbjct: 241 FSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITY 300
Query: 184 NTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE- 242
NTL+ + A++ +D+ A + D +Y +I+ + G A RL ++E
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360
Query: 243 ---GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA---GEFHLMLSLIMH 286
P+ + Y++++ + + + ++Y +M G+ + + I+H
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH 410
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 5/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKM-KHYSTAISLSHQMELKGIRPDIVTSSILI 152
A+ F R+ +M P+P+++ +++IL KM + + + + +M KG++ D T S ++
Sbjct: 229 AIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL 288
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G L A + GY+P T+ N L++ G+ A+ ++
Sbjct: 289 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+Y L+ + G ++ A ++ + PN I Y+T+ID+ K +A L
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 269 YSEM 272
+ M
Sbjct: 409 FYSM 412
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ F+ +L+ + Y A + + G+ PD+VT + L++ Y G+ A +
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + K +P+ + NT++KG C +G++Q A+ ++ +G R +Y T ++G
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY-- 746
Query: 228 TGDTRAALRLLRQIEG-----------PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
A+ + +IE PN + + ++D C+ S+A D S++
Sbjct: 747 -----TAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/136 (18%), Positives = 65/136 (47%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P ++ ++ ++ ++ A + +E ++PD+V+ + +I +C G + A
Sbjct: 663 SPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVR 722
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ + +RG +P NT + G GM + + + R +E+++ +++G C
Sbjct: 723 MLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYC 782
Query: 227 KTGDTRAALRLLRQIE 242
+ G A+ + +I+
Sbjct: 783 RAGKYSEAMDFVSKIK 798
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 99 NRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQ----MELKGIRPDIVTSSILINC 154
NR+ + PS M+L +LL A++ S + + G +PD+V + +++
Sbjct: 585 NRIKEGQIFPSW----MLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSI 640
Query: 155 YCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLD 214
+ A ++ +I + G P+ + N+LM +G +A E + + D
Sbjct: 641 FTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700
Query: 215 EVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
VSY T+I G C+ G + A+R+L ++ P + Y+T + + + ++ D+
Sbjct: 701 LVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I ++ +++ K + A+S+ +ME G+ P+IVT + I+ + G++ A +
Sbjct: 236 PDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRL 295
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
I K N + TL+ G C + A+ + + ++GF V+Y +++ LC+
Sbjct: 296 FREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCE 354
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHL 279
G R A RLL ++ G P+ I +T+I++ CK++ + A + +M+ L
Sbjct: 355 DGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKL 410
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 3/188 (1%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D++ F ++ P + +++L SL+K + T + +M G+ +I ++L+
Sbjct: 151 DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLV 210
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G A ++ + ++G P+ NTL+ C K M A+ D + G
Sbjct: 211 HACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVA 270
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG---PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ V+Y + I+G + G R A RL R+I+ N + Y+T+ID C++ + +A L
Sbjct: 271 PNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLR 330
Query: 270 SEMVAGEF 277
M + F
Sbjct: 331 EVMESRGF 338
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P ++ ++ IL L + A L +M K I PD +T + LIN YC + + SA
Sbjct: 339 SPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVK 398
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
V +++ G + + L+ G C ++ A E ++ +GF +Y+ L++G
Sbjct: 399 VKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFY 458
Query: 227 KTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+LL + E +V +Y +I +CK++ V A L+ M
Sbjct: 459 NQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESM 508
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F R ++ T + + ++ ++ +M A+ L ME +G P +VT + ++
Sbjct: 291 EATRLF-REIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSIL 349
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLC-LKGMVQRAMEFHDDVVAQGF 211
C G++ A ++ + + +P+ I NTL+ C ++ MV A++ ++ G
Sbjct: 350 RKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS-AVKVKKKMIESGL 408
Query: 212 RLDEVSYATLINGLCKTGD-TRAALRLLRQIE---GPNVIMYSTIIDSL 256
+LD SY LI+G CK + A L IE P YS ++D
Sbjct: 409 KLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGF 457
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 95 VSFFNRLLQMHPTPSIIEFSMILTSLLKMKHY-STAISLSHQMELKGIRPDIVTSSILIN 153
+S F ++L+ + TP + IL L+ + Y A L L G+ P+ + ++L+
Sbjct: 139 LSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQ 198
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C L+ A+ + G +L+R P+ L++G C KG V AME DD++ +GF
Sbjct: 199 AFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF-- 256
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
V TLI GLC G + L ++ +G P+ + + ++ C V +A D+
Sbjct: 257 --VPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%)
Query: 157 HLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEV 216
H G L AF + + G PNT N LM+ CL + A + ++ + D
Sbjct: 167 HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD 226
Query: 217 SYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
SY LI G C+ G A+ LL + + T+I LC + + EM++
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKG 286
Query: 277 F 277
F
Sbjct: 287 F 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 4/161 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++L+ P + + +++ + + A+ L M KG PD LI
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIG 264
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C G + ++ +G+ P+ + N L+KG C G V+ A + + V+ G L
Sbjct: 265 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIID 254
++ +I +C ++ L + + I+D
Sbjct: 325 HSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVD 365
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F+ + + +P ++++L L K A++ + M+ GI P ++ + LI+
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G L + + ++K G +P+ + ++ G + G + +A E ++ +G + +
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 218 YATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
Y ++I GLC G+ R A LL+++E PN ++YST++ L K +S+A + EMV
Sbjct: 397 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMV 456
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 76/148 (51%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ N + ++ PS++ ++ ++ L + + +M G RPD+V +++I
Sbjct: 308 ALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMIT 367
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y G+L A + + +G PN N++++GLC+ G + A ++ ++G
Sbjct: 368 GYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNP 427
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI 241
+ V Y+TL++ L K G A +++R++
Sbjct: 428 NFVVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 39/199 (19%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ IL SLL +K Y + QM G PD++T +IL+ LG++ + +
Sbjct: 222 YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMA 281
Query: 173 KRGYQPNTIILN-----------------------------------TLMKGLCLKGMVQ 197
+ G+ P++ N TL+ GL G ++
Sbjct: 282 RDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE 341
Query: 198 RAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTII 253
F D++V G R D V Y +I G +G+ A + R+ ++G PNV Y+++I
Sbjct: 342 ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401
Query: 254 DSLCKVKLVSDAYDLYSEM 272
LC +A L EM
Sbjct: 402 RGLCMAGEFREACWLLKEM 420
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 5/185 (2%)
Query: 98 FNRLLQ-MHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYC 156
N LL+ M P+ +I +++ + K K + L +M +GI+PD T + +I+C
Sbjct: 162 LNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221
Query: 157 HLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEV 216
G A + G +P+ + + ++ G V A+ +D + +R+D V
Sbjct: 222 QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAV 281
Query: 217 SYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+++TLI +G+ L + +++ PN+++Y+ +IDS+ + K A +Y ++
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 273 VAGEF 277
+ F
Sbjct: 342 ITNGF 346
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV +F ++ P + + ++ + + + A+SL + + R D VT S LI
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y G ++ + G +PN +I N L+ + +A + D++ GF
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 214 DEVSYATLIN--GLCKTGDTRAALRLLRQIEGPN----VIMYSTIIDSLCKVKLVSDAYD 267
+ +YA L+ G + GD AL + R+++ VI+Y+T++ + V +A++
Sbjct: 349 NWSTYAALVRAYGRARYGDD--ALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFE 406
Query: 268 LYSEM 272
++ +M
Sbjct: 407 IFQDM 411
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%)
Query: 101 LLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
+L+ P+ I ++ ++ K A + M KG PD+VT S LIN YC +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 161 LTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYAT 220
+ + + + +RG NT+ TL+ G C G + A + +++++ G D +++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 221 LINGLCKTGDTRAALRLLRQIE 242
++ GLC + R A +L ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 141 IRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAM 200
I P +T + +I+ +C ++ A ++ ++ +G P+ + +TL+ G C V M
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 201 EFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSL 256
E ++ +G + V+Y TLI+G C+ GD AA LL ++ P+ I + ++ L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 257 CKVKLVSDAYDLYSEMVAGEFH 278
C K + A+ + ++ E H
Sbjct: 126 CSKKELRKAFAILEDLQKSEDH 147
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 57/114 (50%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + + +P ++ FS ++ K K + + +M +GI + VT + LI
Sbjct: 28 DAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 87
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDV 206
+ +C +G L +A ++ ++ G P+ I + ++ GLC K +++A +D+
Sbjct: 88 HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A++ FN++ + P + + ++ K A+ + +M+ G+ PD T S++I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC G L +A + ++ +G PN + N +M Q A++ + D+ GF
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAYDL 268
D+V+Y+ ++ L G A + +++ N I +Y ++D K V A+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 269 YSEMV 273
Y M+
Sbjct: 597 YQAML 601
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ ++ +L + K + L +M G +P+ VT + LI+ Y L A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ G +P+ + TL+ G + AM+ + + A G D +Y+ +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 233 AALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFH 278
AA +L ++ +G PN++ Y+ ++D K + +A LY +M F
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ TP+++ +++++ K ++Y A+ L M+ G PD VT SI++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
H G L A +V + ++ + P+ + L+ G V++A +++ ++ G R
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR- 606
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
PNV ++++ + +V +++AY+L M+
Sbjct: 607 ------------------------------PNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 274 A 274
A
Sbjct: 637 A 637
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + ++ ++ S + + + A+++ +QM+ G +PD VT LI+ + G L A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ G P+T + ++ L G + A + ++V QG + V+Y +++ K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ + AL+L R ++ P+ + YS +++ L + +A +++EM
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 120 LLKMKHYSTAISLSHQMELK-GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQP 178
L +M Y A+ + ++ + G + D T + ++ Q + ++ +++ G QP
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 179 NTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL 238
NT+ N L+ + AM + + G + D V+Y TLI+ K G A+ +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 239 RQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
++++ P+ YS II+ L K + A+ L+ EMV
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A++ FN++ + P + + ++ K A+ + +M+ G+ PD T S++I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC G L +A + ++ +G PN + N +M Q A++ + D+ GF
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAYDL 268
D+V+Y+ ++ L G A + +++ N I +Y ++D K V A+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 269 YSEMV 273
Y M+
Sbjct: 597 YQAML 601
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ ++ +L + K + L +M G +P+ VT + LI+ Y L A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ G +P+ + TL+ G + AM+ + + A G D +Y+ +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 233 AALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFH 278
AA +L ++ +G PN++ Y+ ++D K + +A LY +M F
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ TP+++ +++++ K ++Y A+ L M+ G PD VT SI++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
H G L A +V + ++ + P+ + L+ G V++A +++ ++ G R
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR- 606
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
PNV ++++ + +V +++AY+L M+
Sbjct: 607 ------------------------------PNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 274 A 274
A
Sbjct: 637 A 637
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + ++ ++ S + + + A+++ +QM+ G +PD VT LI+ + G L A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ G P+T + ++ L G + A + ++V QG + V+Y +++ K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ + AL+L R ++ P+ + YS +++ L + +A +++EM
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 120 LLKMKHYSTAISLSHQMELK-GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQP 178
L +M Y A+ + ++ + G + D T + ++ Q + ++ +++ G QP
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 179 NTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL 238
NT+ N L+ + AM + + G + D V+Y TLI+ K G A+ +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 239 RQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
++++ P+ YS II+ L K + A+ L+ EMV
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A++ FN++ + P + + ++ K A+ + +M+ G+ PD T S++I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC G L +A + ++ +G PN + N +M Q A++ + D+ GF
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAYDL 268
D+V+Y+ ++ L G A + +++ N I +Y ++D K V A+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 269 YSEMV 273
Y M+
Sbjct: 597 YQAML 601
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ ++ +L + K + L +M G +P+ VT + LI+ Y L A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ G +P+ + TL+ G + AM+ + + A G D +Y+ +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 233 AALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFH 278
AA +L ++ +G PN++ Y+ ++D K + +A LY +M F
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ TP+++ +++++ K ++Y A+ L M+ G PD VT SI++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
H G L A +V + ++ + P+ + L+ G V++A +++ ++ G R
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR- 606
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
PNV ++++ + +V +++AY+L M+
Sbjct: 607 ------------------------------PNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 274 A 274
A
Sbjct: 637 A 637
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + ++ ++ S + + + A+++ +QM+ G +PD VT LI+ + G L A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ G P+T + ++ L G + A + ++V QG + V+Y +++ K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ + AL+L R ++ P+ + YS +++ L + +A +++EM
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 120 LLKMKHYSTAISLSHQMELK-GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQP 178
L +M Y A+ + ++ + G + D T + ++ Q + ++ +++ G QP
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 179 NTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL 238
NT+ N L+ + AM + + G + D V+Y TLI+ K G A+ +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 239 RQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
++++ P+ YS II+ L K + A+ L+ EMV
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 90/171 (52%)
Query: 114 SMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILK 173
++++ L + + A+ Q+ K + DIV + L++ + +L A ++G++L
Sbjct: 400 AIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLV 459
Query: 174 RGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRA 233
+G + I TL+ G +G ++RA+E +D ++ + V Y +++NGL K G A
Sbjct: 460 QGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGA 519
Query: 234 ALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHLMLSLI 284
A ++ +E +++ Y+T+++ K V +A D+ S+M + +SL+
Sbjct: 520 AEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLV 570
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKG---IRPDIVTSS 149
+A+S F R+L+ P+++ F+M++ K A+ L +M + + P+ VT +
Sbjct: 236 EALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYN 295
Query: 150 ILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ 209
+IN +C G+L A + G+++K G N L+ G A+ D++ ++
Sbjct: 296 SVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
Query: 210 GFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDA 265
G ++ V Y +++ L GD A+ +LR + N+ + ++ LC+ V +A
Sbjct: 356 GLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEA 415
Query: 266 YDLYSEMVAGEFHLMLSLIMH 286
+ ++ E L+ ++ H
Sbjct: 416 VEFQRQI--SEKKLVEDIVCH 434
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV F ++ + I+ + ++ ++ K + A + M ++G+ D ++ LI
Sbjct: 414 EAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLI 473
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y G+L A + ++K N +I N+++ GL +GM A + V
Sbjct: 474 DGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA-----EAVVNAME 528
Query: 213 L-DEVSYATLINGLCKTGDTRAALRLLRQIEGPN------VIMYSTIIDSLCKVKLVSDA 265
+ D V+Y TL+N KTG+ A +L +++ + ++ ++ +I+ LCK A
Sbjct: 529 IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKA 588
Query: 266 YDLYSEMV 273
++ MV
Sbjct: 589 KEVLKFMV 596
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 151 LINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
+ C ++ ++ + V + GY N N ++ C + + A+ ++ G
Sbjct: 189 FMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCG 248
Query: 211 FRLDEVSYATLINGLCKTGDTRAALRLLRQIE-------GPNVIMYSTIIDSLCKVKLVS 263
+ VS+ +I+G CKTGD R AL+LL ++ PN + Y+++I+ CK +
Sbjct: 249 VWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLD 308
Query: 264 DAYDLYSEMV 273
A + +MV
Sbjct: 309 LAERIRGDMV 318
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 15/166 (9%)
Query: 120 LLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPN 179
LL + + +M+ G ++ T +++I +C +L A SV +LK G PN
Sbjct: 193 LLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPN 252
Query: 180 TIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL---DEVSYATLINGLCKTGDTRAALR 236
+ N ++ G C G ++ A++ + + V+Y ++ING CK G L
Sbjct: 253 VVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAG----RLD 308
Query: 237 LLRQIEGP--------NVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
L +I G N Y ++D+ + +A L EM +
Sbjct: 309 LAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTS 354
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ ++ +++M+ T +++ ++ I+ L K A ++ + ME+K DIVT + L+N
Sbjct: 485 ALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLN 540
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNT--IILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
G + A ++ + K+ + + + N ++ LC G ++A E +V +G
Sbjct: 541 ESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGV 600
Query: 212 RLDEVSYATLINGLCK 227
D ++Y TLI K
Sbjct: 601 VPDSITYGTLITSFSK 616
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV+ + ++Q P + ++ I+ + K ++ L +M+ G+ P T + +
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYG 517
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C A ++ + G++P L+K LC G A ++ DDV +GF
Sbjct: 518 CLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLG 577
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
V+ I+GL K L L R I P+VI Y +I +LCK +A L+
Sbjct: 578 HMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILF 637
Query: 270 SEMVA 274
+EMV+
Sbjct: 638 NEMVS 642
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 88/175 (50%), Gaps = 5/175 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P +I + +++ +L K A L ++M KG++P + T + +I+ +C G++ S
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + + P+ I +L+ GLC G A+ +++ + + +++ LI GLCK
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV-AGEF 277
G + AL R++E P+ +Y +++ S + ++ + ++ EMV G F
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRF 786
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 4/164 (2%)
Query: 117 LTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGY 176
+ L+K + + L + G PD++ +LI C + A + ++ +G
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 177 QPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALR 236
+P N+++ G C +G + R + + D ++Y +LI+GLC +G A+
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 237 LLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
+++G PN I + +I LCK +A + EM E
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKE 749
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
Query: 93 DAVSFFNRLLQMH-PTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK--GIRPDIVTSS 149
+A S F+R+ +M P+ ++ +L ++ K S + + E++ G D T +
Sbjct: 159 EASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLT 218
Query: 150 ILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ 209
++ YC+ G+ A SV IL RG+ + I L+ C G V +A E + + +
Sbjct: 219 PVLQVYCNTGKSERALSVFNEILSRGWL-DEHISTILVVSFCKWGQVDKAFELIEMLEER 277
Query: 210 GFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDA 265
RL+ +Y LI+G K A +L ++ ++ +Y +I LCK K + A
Sbjct: 278 DIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMA 337
Query: 266 YDLYSEM 272
LY E+
Sbjct: 338 LSLYLEI 344
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 139 KGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQR 198
K I PD + SI+INC ++ A +++ +I++ G P ++ N +++G+C +G +
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 199 AMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIID 254
+++ ++ G + + + L + D AL LL+++ P + + ++
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVK 552
Query: 255 SLCKVKLVSDAYDLYSEMVAGE 276
LC+ DA Y + VAGE
Sbjct: 553 KLCENGRAVDACK-YLDDVAGE 573
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAIS-LSHQMELKGIRPDIVTSSILINCYCHLGQLTSAF 165
P + + ++ LL A+ L+ M I+P +V + +I L + A
Sbjct: 480 APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAM 539
Query: 166 SVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGL 225
SV G + K ++ ++ GLC+ V A +F DDV+ R D YA + GL
Sbjct: 540 SVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGL 599
Query: 226 CKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
C++G A L + PNV+ Y+T+I + L +AY + EM
Sbjct: 600 CQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEM 650
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+++ L L M + + +++ M RPD T + +IN C +G++ A V+ +++
Sbjct: 415 YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMM 474
Query: 173 KRGY-QPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG-FRLDEVSYATLINGLCKTGD 230
+ P+ + LNT+M GL +G + A++ + V+ + + V+Y +I GL K
Sbjct: 475 TGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHK 534
Query: 231 TRAALRLLRQIEGPNVIM----YSTIIDSLCKVKLVSDAYDLYSEMV 273
A+ + Q+E +V Y+ IID LC V A + +++
Sbjct: 535 GDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI 581
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 93 DAVSFFNRLLQMHP-TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
+A+ NR++ + P ++ ++ ++ L K+ A+S+ Q+E + D T +I+
Sbjct: 501 EALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAII 560
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I+ C ++ A +++ + + + +KGLC G + A F D+ G
Sbjct: 561 IDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGA 620
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSL 256
+ V Y T+I ++G R A ++L ++ + P+ + + I+D L
Sbjct: 621 IPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWR-ILDKL 668
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 14/175 (8%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY----CHLGQLTS 163
PS + +++ SL K A ++ M +R + + + N Y C + T
Sbjct: 375 PSEYTYKLLMESLCKELDTGKARNVLELM----LRKEGADRTRIYNIYLRGLCVMDNPTE 430
Query: 164 AFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF-RLDEVSYATLI 222
+V+ ++L+ +P+ LNT++ GLC G V AM+ DD++ F D V+ T++
Sbjct: 431 ILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVM 490
Query: 223 NGLCKTGDTRAALRLLRQIE-----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
GL G AL +L ++ P V+ Y+ +I L K+ +A ++ ++
Sbjct: 491 CGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQL 545
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS+ ++ ++ L + A L M +G PD+VT + LI YC + +L A V
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 168 MGNILKRGYQPNTIILNTLMKGLCL-------KGMVQRAMEFHDDVVAQGFRLDEVSYAT 220
+ G +PN++ L+ L+ G + +++ E+ + + ++A
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMK--AAAFAN 277
Query: 221 LINGLCKTGDTRAALRLLRQI---EGPNV-IMYSTIIDSLCKVK 260
L++ +C+ G + + E NV Y +IDSLC+ +
Sbjct: 278 LVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYR 321
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 96 SFFNRLLQMHPTPSIIE-------FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTS 148
+FN + ++ S+ E + ++ SL + + A + + M+ KG++P +
Sbjct: 286 GYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSY 345
Query: 149 SILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLK---GMVQRAMEFHDD 205
+ +I+ C G A+ ++ + + P+ LM+ LC + G + +E
Sbjct: 346 NAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELM-- 403
Query: 206 VVAQGFRLDEVSYATLINGLCKTGDTRAALRLL-RQIEG---PNVIMYSTIIDSLCKVKL 261
+ +G + Y + GLC + L +L ++G P+ +T+I+ LCK+
Sbjct: 404 LRKEGADRTRI-YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGR 462
Query: 262 VSDAYDLYSEMVAGEF 277
V DA + +M+ G+F
Sbjct: 463 VDDAMKVLDDMMTGKF 478
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+I +S L+++ A ++ ++ G+ PD V + +I+ YC+LG+ AF
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLK-GMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
G +LK G P ++ +T++ G C + G + A ++ +G +LD V+Y L++G
Sbjct: 431 FGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 227 KTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
KT L+ ++ P+V Y+ +I S+ + +A ++ SE++ F
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 90/184 (48%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A +F LL+ PS+ ++++ + + S A S+ M+ +G++ D+VT + L++
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y QL F ++ + G P+ N L+ + ++G + A E +++ +GF
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+++ +I G K GD + A L + P+V+ S ++ CK + + A L+
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 270 SEMV 273
++++
Sbjct: 607 NKLL 610
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA S F + ++ ++ ++ K + L +M GI PD+ T +ILI
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G + A ++ +++RG+ P+T+ ++ G +G Q A + +
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+ + L++G CK A+ L ++ P+V++Y+T+I C V + A +L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 269 YSEMV 273
MV
Sbjct: 641 IGLMV 645
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I+ F++ + L K A S+ +++L GI D V+ S +I+ +C +G+ A +
Sbjct: 304 PDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + R PN + ++ + +C G + RA ++ G D V Y T+I+G C
Sbjct: 364 IHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420
Query: 228 TGDTRAALR----LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G T A + LL+ P++ + +I + + +SDA ++ M
Sbjct: 421 LGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + L++ PS + F+ ++ K + A L M ++PD+VT S L+
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC ++ A + +L G +P+ ++ NTL+ G C G +++A E +V +G
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 213 LDEVSYATLINGL 225
+E ++ L+ GL
Sbjct: 651 PNESTHHALVLGL 663
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 1/158 (0%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRG 175
+L +L++ A M +G + S+ I YC G + ++ + G
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301
Query: 176 YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL 235
+P+ + + LC G ++ A + G D VS +++I+G CK G A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 236 RLLRQIE-GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+L+ PN+ +YS+ + ++C + A ++ E+
Sbjct: 362 KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEI 399
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
FS+++ ++ + + A+ L+++++ GI P L+ + L A + ++L
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
RG N +L+ ++ C G + E + G R D V++ I+ LCK G +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 233 AALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
A +L +++ + + S++ID CKV +A L
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+I +S L+++ A ++ ++ G+ PD V + +I+ YC+LG+ AF
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLK-GMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
G +LK G P ++ +T++ G C + G + A ++ +G +LD V+Y L++G
Sbjct: 431 FGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 227 KTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
KT L+ ++ P+V Y+ +I S+ + +A ++ SE++ F
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 90/184 (48%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A +F LL+ PS+ ++++ + + S A S+ M+ +G++ D+VT + L++
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y QL F ++ + G P+ N L+ + ++G + A E +++ +GF
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+++ +I G K GD + A L + P+V+ S ++ CK + + A L+
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 270 SEMV 273
++++
Sbjct: 607 NKLL 610
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA S F + ++ ++ ++ K + L +M GI PD+ T +ILI
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G + A ++ +++RG+ P+T+ ++ G +G Q A + +
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V+ + L++G CK A+ L ++ P+V++Y+T+I C V + A +L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 269 YSEMV 273
MV
Sbjct: 641 IGLMV 645
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I+ F++ + L K A S+ +++L GI D V+ S +I+ +C +G+ A +
Sbjct: 304 PDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + R PN + ++ + +C G + RA ++ G D V Y T+I+G C
Sbjct: 364 IHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420
Query: 228 TGDTRAALR----LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G T A + LL+ P++ + +I + + +SDA ++ M
Sbjct: 421 LGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + L++ PS + F+ ++ K + A L M ++PD+VT S L+
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC ++ A + +L G +P+ ++ NTL+ G C G +++A E +V +G
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 213 LDEVSYATLINGL 225
+E ++ L+ GL
Sbjct: 651 PNESTHHALVLGL 663
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 1/158 (0%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRG 175
+L +L++ A M +G + S+ I YC G + ++ + G
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301
Query: 176 YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL 235
+P+ + + LC G ++ A + G D VS +++I+G CK G A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 236 RLLRQIE-GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+L+ PN+ +YS+ + ++C + A ++ E+
Sbjct: 362 KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEI 399
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
FS+++ ++ + + A+ L+++++ GI P L+ + L A + ++L
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
RG N +L+ ++ C G + E + G R D V++ I+ LCK G +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 233 AALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDL 268
A +L +++ + + S++ID CKV +A L
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
I + ++ L A S+ ME GI PD+ S +I + + A V
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
+LK+ + N +I++++++ C G A + + LD V Y + L K G
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 231 TRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
A+ L R++ G P+VI Y+T+I C SDA+DL EM
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM 457
Score = 68.2 bits (165), Expect = 6e-12, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + F + + P ++ +S++L S + + +ME + PD+V +I+IN
Sbjct: 654 AYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMIN 706
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YCHL L +++ ++ +R P+ + L+K + + R M+ D +
Sbjct: 707 RYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNL-SREMKAFD------VKP 759
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQ-IEG---PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D Y LI+ CK GD A R+ Q IE P+ Y+ +I CK+ + +A ++
Sbjct: 760 DVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIF 819
Query: 270 SEMV 273
M+
Sbjct: 820 DRMI 823
Score = 67.8 bits (164), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + +S I+ K + A+ + ++M K R + V S ++ CYC +G + A+ +
Sbjct: 324 PDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDL 383
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + + N L G V+ A+E ++ +G D ++Y TLI G C
Sbjct: 384 FKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCL 443
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G A L+ +++G P++++Y+ + L L +A++ M
Sbjct: 444 QGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMM 492
Score = 63.9 bits (154), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 79/177 (44%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F + + + + +++ +L K+ AI L +M KGI PD++ + LI
Sbjct: 379 EAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLI 438
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G+ + AF +M + G P+ +I N L GL G+ Q A E + +G +
Sbjct: 439 GGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVK 498
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
V++ +I GL G+ A +E + ++++ C + A++ +
Sbjct: 499 PTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERF 555
Score = 62.0 bits (149), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
+ F + + P ++ + T LLK K +LS +M+ ++PD+ ++LI+
Sbjct: 719 ALFKDMKRREIVPDVVTY----TVLLKNK---PERNLSREMKAFDVKPDVFYYTVLIDWQ 771
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
C +G L A + +++ G P+ L+ C G ++ A D ++ G + D
Sbjct: 772 CKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDV 831
Query: 216 VSYATLINGLCKTGDTRAALRLLRQI 241
V Y LI G C+ G A++L++++
Sbjct: 832 VPYTALIAGCCRNGFVLKAVKLVKEM 857
Score = 61.6 bits (148), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV FN++L+ + + S IL +M ++S A L + I D V ++ +
Sbjct: 345 AVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFD 404
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
LG++ A + + +G P+ I TL+ G CL+G A + ++ G
Sbjct: 405 ALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTP 464
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D V Y L GL G + A L+ +E P + ++ +I+ L + A Y
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFY 524
Query: 270 SEM 272
+
Sbjct: 525 ESL 527
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 85/212 (40%), Gaps = 39/212 (18%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A +R+ ++ P + ++ + ++ + A + K I PD+ T +I+IN
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
YC L + A+++ ++ +R +P+ + + L+ M +R ME D +
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDM-KREMEAFDVIP------ 696
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE------------------------------- 242
D V Y +IN C D + L + ++
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFD 756
Query: 243 -GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
P+V Y+ +ID CK+ + +A ++ +M+
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMI 788
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + +++++ K+ A + QM G+ PD + LI C C +G L A +
Sbjct: 759 PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMI 818
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR-----LDEVSYATL 221
+++ G +P+ + L+ G C G V +A++ +++ +G + L V YA L
Sbjct: 819 FDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKL 877
Score = 52.0 bits (123), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 98 FNRLLQMH-PTPSIIEFSMILTSLLKMKHY-STAISLSHQMELKGIRPDIVTSSILINCY 155
F R +++ P P + F++ TSL K Y S A L +M G+ P+ LI +
Sbjct: 552 FERFIRLEFPLPKSVYFTL-FTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAW 610
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
C + + A ++ + P+ ++ C ++A +D+ + + D
Sbjct: 611 CRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDV 670
Query: 216 VSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSE 271
V+Y+ L+N + L + R++E P+V+ Y+ +I+ C + + Y L+ +
Sbjct: 671 VTYSVLLN-------SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKD 723
Query: 272 M 272
M
Sbjct: 724 M 724
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I +S ++ L K K A + QME +G PDI T +ILI +C +L A +
Sbjct: 403 PDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALAC 462
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG-FRLDEVSYATLINGLC 226
N+L++G+ ++ +L+ L+ G + + A F ++V + + +Y LI+ L
Sbjct: 463 FANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLL 522
Query: 227 KTGDTRAALRLLRQIEGPNVIMYSTIIDS-LCKVKLVSDA 265
K + AL LL+ ++ N Y+ D L K + DA
Sbjct: 523 KIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDA 562
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+ I SL + + A ++ M G PD +T S L+ C +L A V+ +
Sbjct: 373 YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQME 432
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+G P+ L++G C + +A+ +++ +GF +D LI+G
Sbjct: 433 AQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFE 492
Query: 233 -AALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAYDL 268
A++ L+ ++ NV Y +ID L K+K +A DL
Sbjct: 493 GASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDL 533
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS- 166
P+I F++++ + K K A + +ME G+RPD VT + + CY G+ A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 167 -VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGL 225
V ++K +PN ++ G C +G V+ + F + + V + +LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 226 CKTGDTRA---ALRLLRQIE-GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+ D L L+++ +VI YST++++ + A ++ EMV
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 357
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + F L + PS+I ++ +L ++ K Y + S+ ++E G + D + + +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG-- 210
N + G + A + + + G P T NTL+KG + G +R+ E D ++ +G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 211 -FRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDA 265
+ ++ L+ CK A +++++E P+ + Y+TI +
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI----------ATC 232
Query: 266 YDLYSEMVAGEFHLMLSLIMH 286
Y E V E ++ ++M
Sbjct: 233 YVQKGETVRAESEVVEKMVMK 253
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D + F R+ +M +++ F+ ++ +++ + M+ ++ D++T S ++
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVM 337
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N + G + A V ++K G +P+ + L KG ++A E + ++ + R
Sbjct: 338 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-R 396
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ V + T+I+G C G A+R+ ++ PN+ + T++ +VK A ++
Sbjct: 397 PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 456
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + F L Q P ++ +L +K A S+ +ME +G+ PD T S+LI
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y + G+ SA V+ + QPN+ + + L+ G +G Q+ + ++ + G +
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 213 LDEVSYATLINGLCKTGDTRAAL----RLLRQIEGPNVIMYSTIIDSLCK 258
D Y +I+ K A+ R+L + P+ + ++T+ID CK
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCK 491
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P +++++ S + + L +M+ +GI P++VT + L++ Y G+ A
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G +P++ + N L+ +G+ ++A+ + + G + ++ +LIN +
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
A +L+ ++ P+V+ Y+T++ +L +V +Y EM+
Sbjct: 632 DRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMI 681
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ FS +L + + +M+ G++PD +++I+ + L A +
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+L G +P+ + NTL+ C G A E + + +G +Y +IN
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 526
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
RLL +++ PNV+ ++T++D K +DA + EM
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P + ++++L L A++L + M G+ P ++ + LI+ G+L +
Sbjct: 289 SPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKY 348
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
M +K G P+ + ++ G G +++A E ++ +G + +Y ++I G C
Sbjct: 349 FMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFC 408
Query: 227 KTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
G + A LL+++E PN ++YST++++L V +A+++ +MV
Sbjct: 409 MAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMV 459
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
+ ++L+ TP ++ +++++ + ++ L +M G PD+ T +IL++
Sbjct: 245 YEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLAT 304
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
+ +A +++ ++ + G +P I TL+ GL G ++ F D+ V G D V
Sbjct: 305 GNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVC 364
Query: 218 YATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
Y +I G G+ A + +++ + PNV Y+++I C +A L EM
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 69/148 (46%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ N + ++ P +I F+ ++ L + + G PD+V +++I
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y G+L A + + ++G PN N++++G C+ G + A ++ ++G
Sbjct: 371 GYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNP 430
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI 241
+ V Y+TL+N L G A +++ +
Sbjct: 431 NFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 4/184 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D V F + + P ++ IL SLL +K Y + QM G PD++T +I++
Sbjct: 205 DVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM 264
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
LG+ + ++ ++K G+ P+ N L+ L A+ + + G
Sbjct: 265 FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVE 324
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ + TLI+GL + G A + + P+V+ Y+ +I + A ++
Sbjct: 325 PGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEM 384
Query: 269 YSEM 272
+ EM
Sbjct: 385 FKEM 388
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%)
Query: 97 FFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYC 156
F + +++ TP ++ +++++T + A + +M KG P++ T + +I +C
Sbjct: 349 FMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFC 408
Query: 157 HLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG 210
G+ A +++ + RG PN ++ +TL+ L G V A E D+V +G
Sbjct: 409 MAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 40/219 (18%)
Query: 94 AVSFFNRLLQMHPTPSIIE-FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
AV FN + + ++ ++ +L +L +K + A +L +M KG++PD T +IL+
Sbjct: 165 AVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILV 224
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +C G++ A + + +RG+ P + L++GL G ++ A E + GF
Sbjct: 225 NGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFV 284
Query: 213 LD---------------EV--------------------SYATLINGLCKTGDTRAALRL 237
D EV +Y TLI + K G A RL
Sbjct: 285 PDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRL 344
Query: 238 LRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
L P +Y+ II +C+ + DA+ +S+M
Sbjct: 345 LNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDM 383
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 93 DAVSFFNRLLQMHP--TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSI 150
D++ FFN + +P TP+ +E+ + SL K Y + + QM K + DI ++
Sbjct: 93 DSLRFFN-WARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQM--KDLSLDISGETL 149
Query: 151 --LINCYCHLGQLTSAFSVMGNILKR-GYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVV 207
+I Y G + A + + K G Q + N+L+ LC M A ++
Sbjct: 150 CFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMI 209
Query: 208 AQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVS 263
+G + D+ +YA L+NG C G + A L ++ P +I+ L +
Sbjct: 210 RKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLE 269
Query: 264 DAYDLYSEMVAGEF 277
A ++ S+M G F
Sbjct: 270 SAKEMVSKMTKGGF 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I F++++ ++ K I + + G+ DI T LI +G++ AF +
Sbjct: 285 PDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRL 344
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ N ++ G++P + ++KG+C GM A F D+ + + Y LI +C
Sbjct: 345 LNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLIT-MCG 403
Query: 228 TG 229
G
Sbjct: 404 RG 405
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 92/184 (50%), Gaps = 5/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK-GIRPDIVTSSILI 152
A+ +++++ +P + S+++ + + + A+ + + E G+ ++VT + LI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N Y +G + V+ + +RG N + +L+KG C KG+++ A + + +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSL----CKVKLVSDAYDL 268
D+ Y L++G C+TG R A+R+ + V +TI +SL CK + +A +
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 269 YSEM 272
+S M
Sbjct: 389 FSRM 392
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 109 SIIEFSMILTSLLKMKHY------------STAISLSHQMELKGIRPDIVTSSILINCYC 156
I++F ++L +K + A S+ + K + P+ + ++ I C
Sbjct: 671 KIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLC 730
Query: 157 HLGQLTSAFSVMGNILKRG-YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
G+L A + ++L + P+ L+ G + G + +A D++ +G +
Sbjct: 731 KAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNI 790
Query: 216 VSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSE 271
V+Y LI GLCK G+ A RLL ++ +G PN I Y+T+ID L K V++A L +
Sbjct: 791 VTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEK 850
Query: 272 MV 273
M+
Sbjct: 851 MI 852
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+R+ P ++ ++ + + A+ L QM K + P ++T +IL+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
Y +G S+ +LKRG + I +TL++ L G AM+ ++V+A+G
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAY-- 266
D ++ +I+GLCK A +L + P V Y + KV + +A+
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 267 -------------DLYSEMVAGEF 277
++Y+ +++G F
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAF 587
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISL-SHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
P+ I +++ + L K A L S + PD T +ILI+ G + AF+
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ + +G PN + N L+KGLC G V RA + +G + ++Y TLI+GL
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 227 KTGDTRAALRL 237
K+G+ A+RL
Sbjct: 837 KSGNVAEAMRL 847
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 93 DAVSFFNRLLQMHP-TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
DA F+ LL P +++++ + A +L +M LKGI P+IVT + L
Sbjct: 737 DARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNAL 796
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I C LG + A ++ + ++G PN I NTL+ GL G V AM + ++ +G
Sbjct: 797 IKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG- 855
Query: 212 RLDEVSYATLINGLCKTGD 230
L+ G K GD
Sbjct: 856 ---------LVRGSDKQGD 865
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 149 SILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVA 208
+L++ YC GQ+ A V N+++ G + NT I N+L+ G C G + A + +
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 209 QGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSD 264
+ D +Y TL++G C+ G AL+L Q+ P V+ Y+ ++ ++ D
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 265 AYDLYSEMV 273
L+ M+
Sbjct: 455 VLSLWKMML 463
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 4/180 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DAV + ++++ + + ++ K A + +M ++PD T + L+
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC G + A + + ++ P + N L+KG G + ++ +G
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
DE+S +TL+ L K GD A++L + + I + +I LCK++ V++A ++
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 90/181 (49%), Gaps = 17/181 (9%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+I ++ +++ K +H + L ++ +G+ P + T LI +C++G + A++
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 168 MGNILKRGYQPNTIILNTLMKGL---------CLKGMVQRAMEFHDDVVAQGFR-LDEVS 217
++++G N I + + L CL ++Q+ ++F D++ G++ L E
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKIDEACL--LLQKIVDF--DLLLPGYQSLKEFL 689
Query: 218 YATLINGLCKTGDTRAALR--LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAG 275
A+ L KT ++ +++ PN I+Y+ I LCK + DA L+S++++
Sbjct: 690 EASATTCL-KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748
Query: 276 E 276
+
Sbjct: 749 D 749
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 6/193 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ + +L I +++++ L KM+ + A + + + +P + T L
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALS 548
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y +G L AF+V + ++G P + NTL+ G + + + ++ A+G
Sbjct: 549 HGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLT 608
Query: 213 LDEVSYATLINGLCKTG-DTRAALRLLRQIEGP---NVIMYSTIIDSLCKVKLVSDAYDL 268
+Y LI G C G +A IE NV + S I +SL ++ + +A L
Sbjct: 609 PTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLL 668
Query: 269 YSEMVAGEFHLML 281
++V +F L+L
Sbjct: 669 LQKIV--DFDLLL 679
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA F + P ++ F+ +L ++ A + QM G PDIV + L+
Sbjct: 236 DAAKLFEDMRMRFPV-NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLL 294
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y + G++ A+ ++ ++ +RG++PN L++ LC ++ AM+ ++
Sbjct: 295 SGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECE 354
Query: 213 LDEVSYATLINGLCKTGDTRAA-------------------------------------- 234
D V+Y L++G CK G
Sbjct: 355 ADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLEL 414
Query: 235 LRLLRQIE-GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ +RQIE P++ +Y+ +I CK+ V +A L++EM
Sbjct: 415 MEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 22/194 (11%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + + P+ +++++ +L K+ A+ + +ME D+VT + L+
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 364
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKG--------LCLKGMVQ-RAMEFH 203
+ +C G++ + V+ +++K+G P+ + +M CL+ M + R +E+H
Sbjct: 365 SGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Query: 204 DDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKV 259
D+ Y +I CK G+ + A+RL ++E P V + +I+ L
Sbjct: 425 PDIGI---------YNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQ 475
Query: 260 KLVSDAYDLYSEMV 273
+ +A D + EMV
Sbjct: 476 GCLLEASDHFKEMV 489
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKG---IRPDIVTSSILINCYCHLGQLTSAF 165
SI + ++ L KM+ + L +M + I P++ +L+ + + A
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRFASADMVKKAI 203
Query: 166 SVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGL 225
V+ + K G++P+ + L+ LC G V+ A + +D+ + F ++ + +L+ G
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGW 262
Query: 226 CKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
C+ G A +L Q+ P+++ Y+ ++ ++DAYDL +M
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDM 313
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 100/186 (53%), Gaps = 7/186 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + FN L + + + ++ ++++ Y A+++ +ME G +P ++T ++++N
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 154 CYCHLGQLTSAFSVMGNILK-RGYQPNTIILNTLMKGLCLKGMV-QRAMEFHDDVVAQGF 211
+ +G + + + +K G P+ NTL+ C +G + Q A + +++ A GF
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGF 310
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYD 267
D+V+Y L++ K+ + A+++L + + G P+++ Y+++I + + ++ +A +
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME 370
Query: 268 LYSEMV 273
L ++M
Sbjct: 371 LKNQMA 376
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 42/202 (20%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKM-KHYSTAISLSHQMELKGIRPDIVTSSIL 151
+AV+ F ++ + P++I +++IL KM ++ SL +M+ GI PD T + L
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTL 285
Query: 152 INCYCHLGQL------------------------------------TSAFSVMGNILKRG 175
I C C G L A V+ ++ G
Sbjct: 286 ITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 176 YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL 235
+ P+ + N+L+ GM+ AME + + +G + D +Y TL++G + G +A+
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 236 RLLRQIEG----PNVIMYSTII 253
+ ++ PN+ ++ I
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFI 426
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ N ++ +PSI+ ++ ++++ + A+ L +QM KG +PD+ T + L+
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + G++ SA S+ + G +PN N +K +G M+ D++ G
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D V++ TL+ + G + ++++ P ++T+I + + A +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 269 YSEMV 273
Y M+
Sbjct: 512 YRRML 516
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 135 QMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKG 194
+++ +G PDI T + +++ Y + A V+ + +RG+ P+ N+LM
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Query: 195 MVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYS 250
++ E +++A+G + D +SY T+I C+ R A R+ ++ P+VI Y+
Sbjct: 679 DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Query: 251 TIIDSLCKVKLVSDA 265
T I S + +A
Sbjct: 739 TFIGSYAADSMFEEA 753
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 82/186 (44%), Gaps = 4/186 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S F + P+I F+ + ++ + + ++ + G+ PDIVT + L+
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ G + V + + G+ P NTL+ G ++AM + ++ G
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
D +Y T++ L + G + ++L ++E PN + Y +++ + K + + L
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 270 SEMVAG 275
E+ +G
Sbjct: 583 EEVYSG 588
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 59/121 (48%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TPS+ ++ ++ + + + + ++ KGI+PDI++ + +I YC ++ A
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 720
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ + G P+ I NT + M + A+ ++ G R ++ +Y ++++G C
Sbjct: 721 IFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC 780
Query: 227 K 227
K
Sbjct: 781 K 781
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 94/218 (43%), Gaps = 39/218 (17%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A++ + R+L TP + ++ +L +L + + + + +ME +P+ +T L++
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 154 CYCHLGQ-----------------------------------LTSAFSVMGNILKRGYQP 178
Y + + L A + +RG+ P
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 179 NTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL 238
+ LN+++ + MV +A D + +GF +Y +L+ ++ D + +L
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 239 RQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
R+I +G P++I Y+T+I + C+ + DA ++SEM
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 77/177 (43%), Gaps = 4/177 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+ L + +P I + +++ + + + A + M+ +G P + T + L+
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + ++ IL +G +P+ I NT++ C ++ A ++ G
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDA 265
D ++Y T I A+ ++R + G PN Y++I+D CK+ +A
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+ I+ ++ +L K + L ++E+KG++PD T +I++N ++G A
Sbjct: 291 SQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEK 350
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ I + G QP+ + N L+ GLC G V RAM + + DE +Y ++++ LC
Sbjct: 351 HLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLC 406
Query: 227 KTGDTRAALRLL 238
K G A +LL
Sbjct: 407 KDGRLVCASKLL 418
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + R+ + P + ++ +++ K + + L +M G+ PD+ + + L+
Sbjct: 66 EAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLM 125
Query: 153 NCYCHLGQLTSAFSVM-GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
+CY LG+ AF ++ +I G P N L+ LC G A+E + ++
Sbjct: 126 SCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-V 184
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
+ + ++Y LINGLCK+ + ++R+++ PN + Y+T++ K K +
Sbjct: 185 KPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQ 244
Query: 268 LYSEM 272
L+ +M
Sbjct: 245 LFLKM 249
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
R L P S ++ + SL K ++ A +L G+ PD++T + LI Y
Sbjct: 3 RGLMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFI 62
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
+ A++V + + G +P+ N+L+ G M+ R ++ D+++ G D SY
Sbjct: 63 GIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYN 122
Query: 220 TLINGLCKTGDTRAALRLLRQ---IEG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
TL++ K G A ++L + + G P + Y+ ++D+LCK +A +L+ +
Sbjct: 123 TLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL 180
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I ++++L +L K H AI L ++ + ++P+++T +ILIN C ++ S +
Sbjct: 152 PGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWM 210
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
M + K GY PN + T++K +++ ++ + +G+ D + +++ L K
Sbjct: 211 MRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIK 270
Query: 228 TGDTRAALRLLRQI-----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
TG A + ++ +++ Y+T+++ K + DL E+
Sbjct: 271 TGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEI 320
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP+ + ++ +L K K + L +M+ +G D + +++ G+ A+
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYE 279
Query: 167 VMGNILKRGYQPNTII-LNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGL 225
M +++ G + I+ NTL+ G + + +++ +G + D+ ++ ++NGL
Sbjct: 280 CMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGL 339
Query: 226 CKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM-VAGEF 277
G+T A + L I P+V+ + +ID LCK V A L++ M V EF
Sbjct: 340 LNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEF 396
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRP-DIVTSSILINCYCHLGQLTSAFSVMGNILKR 174
++++L+K A H++ G R DIV+ + L+N Y G L + ++ I +
Sbjct: 264 VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK 323
Query: 175 GYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAA 234
G +P+ ++ GL G A + + G + V+ LI+GLCK G A
Sbjct: 324 GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRA 383
Query: 235 LRLLRQIEGPNVIMYSTIIDSLCK 258
+RL +E + Y++++ +LCK
Sbjct: 384 MRLFASMEVRDEFTYTSVVHNLCK 407
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 96 SFFNRLL-QMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVT-SSILIN 153
FN L ++ P I+ ++ ++ +L + A++L ++E KG++PDIVT +++L++
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 154 CYC----HLGQLTSA------------------------------FSVMGNILKRGYQPN 179
Y LG+ A ++ G + G +P+
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 180 TIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLR 239
N +++G +G + A ++ ++V G+R D+ ++A L+ +CK GD +A+ L +
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Query: 240 QIEGPNVIMYST----IIDSLCKVKLVSDAYDL 268
+ ++ T ++D L K +A ++
Sbjct: 345 ETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK-GIRPDIVTSSIL 151
+A F + S++ F+ +L++ K + L +++ K I+PDIV+ + L
Sbjct: 127 NAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I C L A +++ I +G +P+ + NTL+ LKG + E +V +
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNV 246
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
+D +Y + GL ++ + L +++ P+V ++ +I + +A
Sbjct: 247 AIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEA 306
Query: 268 LYSEMV 273
Y E+V
Sbjct: 307 WYKEIV 312
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ F +++ K + + + M+ G+ + T +I+I C C + A ++
Sbjct: 215 PTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKAL 274
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ +PN++ + L+ G C + + AM + +V G++ D Y TLI+ LCK
Sbjct: 275 IDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCK 334
Query: 228 TGDTRAALRLLRQIEGPNVI 247
GD AL L R+ N +
Sbjct: 335 GGDFETALILCRESMEKNWV 354
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 104/222 (46%), Gaps = 36/222 (16%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV FN+++Q+ +P+++ ++ ++ + + A ++ +++ +G+ PDIV +++I+
Sbjct: 266 AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKG---MVQR------------ 198
Y LG+ A V ++ KR P+ +++ LCL G +V R
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLV 385
Query: 199 -----------------AMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL---- 237
A++ + + F LD +Y ++ LC+ G RAA+++
Sbjct: 386 TGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKII 445
Query: 238 LRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHL 279
+++ + + +S IIDSL ++ + A L+ + ++ L
Sbjct: 446 IKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPL 487
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 7/187 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F L + P F+ IL+SL + ++H + G D+VT ++L
Sbjct: 335 EARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLS 391
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC+ +G + A V+ + + + + + LC G + A++ + ++ +
Sbjct: 392 NCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKH 451
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI---EGP-NVIMYSTIIDSLCKVKLVSDAYDL 268
LD ++ +I+ L + G A+ L ++ + P +V+ Y+ I L + K + +AY L
Sbjct: 452 LDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSL 511
Query: 269 YSEMVAG 275
+M G
Sbjct: 512 CCDMKEG 518
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
S+ +SM+++ + A+ L ++M G P++VT + LI + LG + AF+V+
Sbjct: 246 SVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVL 305
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
+ G P+ ++ N ++ G + A + + + D+ ++A++++ LC +
Sbjct: 306 SKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLS 365
Query: 229 GDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
G R+ I G + + + + S C K+ ++Y L
Sbjct: 366 GKFDLVPRITHGI-GTDFDLVTGNLLSNCFSKIGYNSYAL 404
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A++ FN++ + P + + ++ K A+ + +M+ G+ PD T S++I
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
NC G L +A + ++ +G PN + N ++ + A++ + D+ GF+
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAYDL 268
D+V+Y+ ++ L G A + +++ N + +Y ++D K V A+
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 269 YSEMV 273
Y M+
Sbjct: 592 YQAML 596
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 92/192 (47%), Gaps = 4/192 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ + R+ + +P +S+I+ L K H A L +M +G P++VT +I+I
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ +A + ++ G+QP+ + + +M+ L G ++ A ++ + +
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 214 DEVSYATLINGLCKTGDTRAALR----LLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLY 269
DE Y L++ K G+ A + +L+ PNV ++++ + +V +S+AY+L
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Query: 270 SEMVAGEFHLML 281
M+A H L
Sbjct: 628 QSMLALGLHPSL 639
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ ++ +L + K + L +M G +P+ VT + LI+ Y L A +V +
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ G +P+ + TL+ G + AM+ + + G D +Y+ +IN L K G
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 233 AALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFH 278
AA RL ++ G PN++ ++ +I K + A LY +M F
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + ++ ++ S + + A+++ +QM+ G PD VT LI+ + G L A +
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDM 451
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G P+T + ++ L G + A ++V QG + V++ +I K
Sbjct: 452 YQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 511
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ AL+L R ++ P+ + YS +++ L + +A +++EM
Sbjct: 512 ARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 120 LLKMKHYSTAISLSHQMELK-GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQP 178
L +M +Y+ A+ + ++ + G + D T + ++ Q ++ +++ G +P
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKP 392
Query: 179 NTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL 238
NT+ N L+ ++ AM + + G D V+Y TLI+ K G A+ +
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
Query: 239 RQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
++++ P+ YS II+ L K + A+ L+ EMV
Sbjct: 453 QRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVG 492
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 102 LQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQL 161
L+ H TP+ F++ + K A+ +M+ G RP +++ + +I CYC +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 162 TSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATL 221
+ ++ + G PN+I T+M L + + A+ + G + D + Y L
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 222 INGLCKTGDTRAALRLLRQIEGP------NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
I+ L + G A R+ R +E P N Y+++I C A +L EM
Sbjct: 336 IHTLARAGRLEEAERVFR-VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM 391
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ I ++ I++SL K + A+ ++ +M+ G +PD + + LI+ G+L A V
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Query: 168 MG-NILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEV-SYATLINGL 225
+ + G NT N+++ C +A+E ++ + +V +Y L+
Sbjct: 352 FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 226 CKTGDTRAALRLLRQIEGPNVI-----MYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
K GD +LL+++ + + Y+ +I LC+ + AY L+ EM++ +
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD 467
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 102 LQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQL 161
L+ H TP+ F++ + K A+ +M+ G RP +++ + +I CYC +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 162 TSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATL 221
+ ++ + G PN+I T+M L + + A+ + G + D + Y L
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 222 INGLCKTGDTRAALRLLRQIEGP------NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
I+ L + G A R+ R +E P N Y+++I C A +L EM
Sbjct: 336 IHTLARAGRLEEAERVFR-VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM 391
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ I ++ I++SL K + A+ ++ +M+ G +PD + + LI+ G+L A V
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Query: 168 MG-NILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEV-SYATLINGL 225
+ + G NT N+++ C +A+E ++ + +V +Y L+
Sbjct: 352 FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 226 CKTGDTRAALRLLRQIEGPNVI-----MYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
K GD +LL+++ + + Y+ +I LC+ + AY L+ EM++ +
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD 467
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 126 YSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNT 185
Y + QM+ I+PD+V+ ++LI Y + A SV +L G +P N
Sbjct: 295 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 354
Query: 186 LMKGLCLKGMVQRAMEFHDDVVAQGFRLDEV-----SYATLINGLCKTGDTRAALRLLRQ 240
L+ + GMV++A V + R D + SY T+++ D A + ++
Sbjct: 355 LLDAFAISGMVEQA-----KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409
Query: 241 IE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
I+ PN++ Y T+I K V ++Y +M
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 69/150 (46%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+S F +L P+ ++++L + A ++ M I PD+ + + ++
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y + + A I G++PN + TL+KG V++ ME ++ + G +
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE 242
++ T+++ + + +AL +++E
Sbjct: 452 ANQTILTTIMDASGRCKNFGSALGWYKEME 481
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 126 YSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNT 185
Y + QM+ I+PD+V+ ++LI Y + A SV +L G +P N
Sbjct: 302 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 361
Query: 186 LMKGLCLKGMVQRAMEFHDDVVAQGFRLDEV-----SYATLINGLCKTGDTRAALRLLRQ 240
L+ + GMV++A V + R D + SY T+++ D A + ++
Sbjct: 362 LLDAFAISGMVEQA-----KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 416
Query: 241 IE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
I+ PN++ Y T+I K V ++Y +M
Sbjct: 417 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 69/150 (46%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+S F +L P+ ++++L + A ++ M I PD+ + + ++
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y + + A I G++PN + TL+KG V++ ME ++ + G +
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 458
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE 242
++ T+++ + + +AL +++E
Sbjct: 459 ANQTILTTIMDASGRCKNFGSALGWYKEME 488
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+ ++L A+ + + + GI D+V L+ C + A ++ +
Sbjct: 181 YEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-R 239
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+R + + +N ++ G C+ G V A F D++A R D VSY T+IN L K G
Sbjct: 240 RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLG 299
Query: 233 AALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
A+ L R + P+V + + +ID+LC K + +A +++ E+
Sbjct: 300 KAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREI 343
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 142 RPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAME 201
RPD+V+ +IN G+L A + + P+ I N ++ LC K + A+E
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALE 338
Query: 202 FHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE------GPNVIMYSTII 253
++ +G + V+Y +L+ LCK T L+ ++E PN + +S ++
Sbjct: 339 VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL 396
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV FN + P + ++ +++ ++K + A SL +ME G R DI + +I++
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N + G A + I G +P+ + NTL+ GM + A ++ +GF
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Query: 213 LDEVSYATLINGL 225
D ++Y+++++ +
Sbjct: 617 YDAITYSSILDAV 629
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F + + +P++ ++ ++ L K A M G+ PD+V + L+N
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 154 CYCHLG---QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCL-KGMVQRAMEFHDDVVAQ 209
+G +LT+ FS MG + R P + NT++K L K V + D + A
Sbjct: 347 ILGKVGRVEELTNVFSEMG--MWRC-TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 210 GFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDA 265
E +Y+ LI+G CKT AL LL +++ P Y ++I++L K K A
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 266 YDLYSEM 272
+L+ E+
Sbjct: 464 NELFKEL 470
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 5/172 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I +S +++S K+ +AI L +M+ ++P + L+ Y +G++ A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + G P L+KGL G V A F+ D++ G D V L+N L K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKL-VSDAYDLYSEMVA 274
G + ++ P V+ Y+T+I +L + K VS+ + +M A
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMK-HYSTAISLSHQMELKGIRPDIVTSSILINCYC 156
F+ + TP+++ ++ ++ +L + K H S S +M+ + P T SILI+ YC
Sbjct: 361 FSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYC 420
Query: 157 HLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEV 216
++ A ++ + ++G+ P +L+ L + A E ++ +
Sbjct: 421 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSR 480
Query: 217 SYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
YA +I K G A+ L +++ GP+V Y+ ++ + K ++++A L +M
Sbjct: 481 VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 82/175 (46%), Gaps = 4/175 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F L + S +++++ K S A+ L ++M+ +G PD+ + L++
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
G + A S++ + + G + + N ++ G G+ +RA+E + + G +
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSD 264
D V+Y TL+ G A R++R+++ + I YS+I+D++ V D
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F L +M P+++ ++ IL + + + AI L M+ K I ++VT + +I
Sbjct: 348 EADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 407
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
Y + A +++ + RG +PN I +T++ G + RA + + G
Sbjct: 408 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 467
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDA 265
+D+V Y T+I + G A RLL +++ P+ I T I L K +A
Sbjct: 468 IDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEA 520
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TPS+ ++++L ++L+ K + A L +M + + PD T S LI + G SA S
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 167 VMGNILKRGYQPNTIILNTLM---KGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLIN 223
+ + + + ++ + L+ + LC +A+ + G D V+Y ++IN
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLC---DYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 224 GLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
K R A L++++ PN + YST++ + +A +++EM
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM 321
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+ + +S +L+ ++ + A+S+ +M+ D+ T +I+I+ Y L + A +
Sbjct: 293 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
++ K +PN + NT+++ + A+ + + + V+Y T+I K
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
T + A L+++++ PN I YSTII K + A L+ ++
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S+ ++ Q + ++ +S ++ ++ YS AIS+ +++ GI PD+V + +IN
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y A ++ + + G PNT+ +TL+ A+ ++ L
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 214 DEVSYATLINGLCKTGDTRAALRL---LRQIE-GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
D + +I+ + + A RL LR+++ PNV+ Y+TI+ + +L +A L+
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 4/170 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
F +++ L K + + +M +PD+ + +I G L ++ V +
Sbjct: 266 FMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMR 325
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+ +P+ + TL+ GLC G V+R E ++ + +D Y LI G G R
Sbjct: 326 RDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVR 385
Query: 233 AALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAYDLYSEMVAGEFH 278
+A L + I +Y+ +I LC V V AY L+ + E
Sbjct: 386 SACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELE 435
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/180 (18%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
+ ++ + P + ++ I+ +L+K ++ A+++ + G+ + T IL+ C
Sbjct: 216 YEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCK 275
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G++ ++ + + +P+ ++K L +G + ++ D++ + D ++
Sbjct: 276 AGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMA 335
Query: 218 YATLINGLCKTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVKLVSDAYDLYSEMV 273
Y TL+ GLCK G L +++G ++ +Y +I+ V A +L+ ++V
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLV 395
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 4/156 (2%)
Query: 125 HYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILN 184
H+ A L M+ +G P ILI + + + V + K G++P + N
Sbjct: 173 HFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYN 232
Query: 185 TLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE-- 242
+M L G A+ ++D G + ++ L+ GLCK G L +L+++
Sbjct: 233 RIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMREN 292
Query: 243 --GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
P+V Y+ +I +L + + ++ EM E
Sbjct: 293 LCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDE 328
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 11/172 (6%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
S+ +++++ +L KM ++SL ++M G PD + SI I C+ G + +A S
Sbjct: 506 SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFH 565
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAM----EFHDDVVAQGFRLDEVSYATLING 224
I++ P+ +L KGLC G + M E +V + E YA +
Sbjct: 566 EKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPM---EFKYALTVCH 622
Query: 225 LCKTGDTRAALRLLRQI--EGP--NVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+CK + ++++ ++ EG N ++Y II + K + A ++++E+
Sbjct: 623 VCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTEL 674
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 5/172 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
FS ++ SL +M++ A +L M KG P +++++ G L A V+ +
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
RG +P+ ++ G GM+ A E + + +L V+Y LI G CK +
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYD 494
Query: 233 AALRLLRQIE----GPNVIMYSTIIDSLC-KVKLVSDAYDLYSEMVAGEFHL 279
AL+LL +++ PN Y+ +I S C K A L+ EM HL
Sbjct: 495 EALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHL 546
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + F L + PS+I ++ +L ++ K Y + S+ ++E G + D + + +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG-- 210
N + G + A + + + G P T NTL+KG + G +R+ E D ++ +G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 211 -FRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTI 252
+ ++ L+ CK A +++++E P+ + Y+TI
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS- 166
P+I F++++ + K K A + +ME G+RPD VT + + CY G+ A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 167 -VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGL 225
V ++K +PN ++ G C +G V+ + F + + V + +LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 226 CK-------------------------TGDTRAALRLLRQIEGPN----VIMYSTIIDSL 256
+ G+ + +++L ++ N VI YST++++
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 257 CKVKLVSDAYDLYSEMV 273
+ A ++ EMV
Sbjct: 366 SSAGYMEKAAQVFKEMV 382
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F++L + TP+++ ++++L ++++ A + + M +G++PDIV ++++
Sbjct: 282 EAQVLFDKLKERF-TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVML 340
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + A + + +G PN +++ C + ++ A+E+ DD+V G +
Sbjct: 341 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D Y LI G LL++++ P+ Y+ +I + K+ A +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 269 YSEMVAGE 276
Y++M+ E
Sbjct: 461 YNKMIQNE 468
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 74/184 (40%), Gaps = 35/184 (19%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F+ + P P++ +++++ K TAI M G++PD + LI
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFH--------- 203
+ +L + + ++ + ++G+ P+ N L+K + + M + A +
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIE 470
Query: 204 --------------------------DDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
++++ +G D+ SY LI GL G +R A R
Sbjct: 471 PSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRY 530
Query: 238 LRQI 241
L ++
Sbjct: 531 LEEM 534
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 3/164 (1%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D +SF ++ P + + IL SL + A ++E G + D VT ILI
Sbjct: 309 DLLSFIG---EVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILI 365
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C+ G + A + I+ +GY+P+ N ++ GL KG+ Q D++ G
Sbjct: 366 GWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMM 425
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSL 256
L ++ ++ G CK A R++ ++ G +I S + D L
Sbjct: 426 LSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPL 469
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 176 YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAAL 235
Y+P+ + N ++ LC + +RA + +++ GF+ DEV++ LI C GD + A+
Sbjct: 319 YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAV 378
Query: 236 RLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHLMLSL 283
L +I +G P+V Y+ I+ L + L + + EM E +MLSL
Sbjct: 379 LYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEM--KENGMMLSL 428
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 18/260 (6%)
Query: 19 QSSMVVKPSTFGMMLGVVGVVSRAHHISTKIAAMSSSSLFRLTRF-PFLSNPTFLLXXXX 77
Q S++V P + +L V H S+ + R TRF P L + T ++
Sbjct: 207 QDSVIVDPRLYSRLLSSVC----KHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLV 262
Query: 78 XXXXXXXXXXXXXXXDAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQME 137
+ VS N++ P ++ ++++L ++ + Y A L ++
Sbjct: 263 EGGRGK---------EVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELL 313
Query: 138 LKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQ 197
L G+ PD+ T ++ IN C + A +M ++ K G +PN + N L+K L G +
Sbjct: 314 LLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLS 373
Query: 198 RAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYST----II 253
RA ++ G + ++ +I+ + + A LL + NV + S+ +I
Sbjct: 374 RAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVI 433
Query: 254 DSLCKVKLVSDAYDLYSEMV 273
LC+ L+ A +L + +V
Sbjct: 434 SRLCEKGLMDQAVELLAHLV 453
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 102 LQMH---PTPSIIEFSMILTSLLKMKHYSTAISLSHQMEL--KGIRPDIVTSSILINCYC 156
Q+H PTP F ++ +L K S+ + +E+ K P+ + + I Y
Sbjct: 63 FQLHNCEPTPQAYRF--VIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDV-IAAYG 119
Query: 157 HLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ----GFR 212
G++ A V I P+ LN L+ L K ++++E +++ + G R
Sbjct: 120 FSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRK---RQSLELVPEILVKACRMGVR 176
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI----MYSTIIDSLCKVK 260
L+E ++ LI+ LC+ G+ A L+R + +VI +YS ++ S+CK K
Sbjct: 177 LEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHK 228
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELK-GIRPDIVTSSILINCYCHLGQLTSAFS 166
P+ F+ ++ S + + +ME + G P++ + ++L+ YC G ++ A
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
V + RG + + NT++ GLC V +A E D+ +G ++Y L+NG C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 227 KTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVK---LVSDAYDLYSEMV 273
K GD + L + R+++ + + +++ LC + V +A D+ + V
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAV 416
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 80/179 (44%), Gaps = 8/179 (4%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P++ +++++ + S A + +M+++G+ DIV + +I C ++ A
Sbjct: 278 SPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKE 337
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ ++ +G + + L+ G C G V + + ++ +GF D ++ L+ GLC
Sbjct: 338 LFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC 397
Query: 227 KTGDTRAALRLLRQIEG--------PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
D + + ++ P+ Y ++ LC+ + A ++ +EMV F
Sbjct: 398 DDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGF 456
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+++I+ L K + A ++ + + G++PD+ T +++I + LG+ ++ M +
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEKLYAEM---I 72
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+RG P+TI N+++ GLC + + +A + ++ TLING CK +
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS---------TFNTLINGYCKATRVK 123
Query: 233 AALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
+ L R+ NVI Y+T+I +V + A D++ EMV+
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 144 DIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFH 203
D +I+I+ C G+ A ++ N+L G QP+ N +++ L RA + +
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLG----RAEKLY 68
Query: 204 DDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVS 263
+++ +G D ++Y ++I+GLCK A ++ + ++T+I+ CK V
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS-----TFNTLINGYCKATRVK 123
Query: 264 DAYDLYSEM 272
D +L+ EM
Sbjct: 124 DGMNLFCEM 132
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A + F LL P + ++M +++ A L +M +G+ PD +T + +I
Sbjct: 32 EAGNIFTNLLISGLQPDVQTYNM----MIRFSSLGRAEKLYAEMIRRGLVPDTITYNSMI 87
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ C +L A R + NTL+ G C V+ M ++ +G
Sbjct: 88 HGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIV 138
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDA 265
+ ++Y TLI+G + GD AL + +++ V I + I+ LC K + A
Sbjct: 139 ANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKA 195
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 7/186 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRP-DIVTSSILI 152
A+ F S F+ +L L + H S A S+ + KG P D + +I+I
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK--KGNIPFDSCSYNIMI 262
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + LG++ V+ +++ G+ P+ + + L++GL G + ++E D++ +G
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D Y +I D ++R R++ PN+ YS ++ L K + VSDA ++
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 269 YSEMVA 274
+ EM++
Sbjct: 383 FEEMLS 388
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D+V F+ + P ++ ++ + + + + ++ +M + P++ T S L+
Sbjct: 308 DSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV 367
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +++ A + +L RG P T ++ + +K LC G AM + G R
Sbjct: 368 SGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCR 427
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDA 265
+ E +Y L+ L + G L + +++ +V +Y I+D LC + + +A
Sbjct: 428 ISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENA 484
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 4/181 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+++ ++ R+L P++ +S +++ L+K + S A+ + +M +G+ P + +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G +A + K G + + L+K L G + D++ G+
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYP 462
Query: 213 LDEVSYATLINGLCKTGDTRAAL----RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
D Y +++GLC G A+ +R+ PN +YS + L AY L
Sbjct: 463 SDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKL 522
Query: 269 Y 269
+
Sbjct: 523 F 523
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D S N + ++ P + + +++ L K A ++ ME G+RP + S +I
Sbjct: 530 DLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSII 589
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
G++ A +L+ G QP+ I ++ G + A E ++VV R
Sbjct: 590 GSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLR 649
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTII 253
+Y LI+G K G + L ++ +G PNV++Y+ +I
Sbjct: 650 PSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 139 KGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQR 198
K I P++ + +I YC G+L A++ + ++ K G PN + LMK G ++
Sbjct: 788 KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIES 847
Query: 199 AMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIID 254
A++ + + D+V Y+TL+ GLC AL L+ +++ PN Y ++
Sbjct: 848 AIDLFEGTNCEP---DQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQ 904
Query: 255 SLCKVKLVSDAYDLYSEMVA 274
LC +L +A + +M A
Sbjct: 905 CLCYSRLTMEAVKVVKDMAA 924
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A + + + ++ P++ +S I+ SL K A +M GI+PD + I+IN
Sbjct: 566 AFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMIN 625
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y G++ A ++ ++K +P++ L+ G GM+++ ++ D ++ G
Sbjct: 626 TYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTI 252
+ V Y LI K GD + + L + G N I + I
Sbjct: 686 NVVLYTALIGHFLKKGDFKFSFTLF-GLMGENDIKHDHI 723
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIE-FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
+A+ + L M P + + + K + A +L ME+ G D V + L
Sbjct: 219 EAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCL 278
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
+ YC +T A + +++R ++ + I NTL+ G GM+ + ++ +G
Sbjct: 279 MKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGV 338
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEGP-----NVIMYSTIIDSLCKVKLVSDAY 266
+ + +Y +I CK G+ ALRL G NV Y+ +I K + A
Sbjct: 339 QSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAV 398
Query: 267 DLYSEMV 273
DL M+
Sbjct: 399 DLLMRML 405
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S +++ + TP ++ ++ L + SL + ++ PD+ T I++N
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C +AF+++ + + G +P I ++++ L +G V A E ++ G +
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
DE++Y +IN + G A L+ ++ P+ Y+ +I K+ ++
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYL 675
Query: 270 SEMV 273
+M+
Sbjct: 676 DKML 679
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 7/170 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P++ + I+T A + M+ +GI P++VT +IL+ + G + SA +
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+P+ ++ +TL+KGLC A+ ++ G ++ SY L+ LC
Sbjct: 852 FEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCY 908
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
+ T A+++++ + P I ++ +I LC+ K + +A L++ MV
Sbjct: 909 SRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMV 958
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 157 HLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEV 216
+ G + A V+G + K+ PN + NT++ G C G + A + + +G + V
Sbjct: 772 NYGSKSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLV 830
Query: 217 SYATLINGLCKTGDTRAALRLLRQIE-GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+Y L+ + GD +A+ L P+ +MYST++ LC K DA L EM
Sbjct: 831 TYTILMKSHIEAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEM 887
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 78/153 (50%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ IL+S K+ + AI L +ME+ G++PDIVT + L++ Y G A +V+ +
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
G +P+T +++L++ + G ++ H ++ D TLI+ KTG
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 233 AALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDA 265
A + ++ N++ +++++ L L+ DA
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDA 310
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%)
Query: 101 LLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
+ M +I+ ++ +++ L A +L +ME +GI+PD +T + L + Y LG+
Sbjct: 282 VFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK 341
Query: 161 LTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYAT 220
A V+G + ++G PN + + G G + A++ + +G + + +T
Sbjct: 342 PEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMST 401
Query: 221 LI 222
L+
Sbjct: 402 LL 403
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ + + P I ++ +L LK + + A L +M +G+R T +ILI
Sbjct: 342 DAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILI 401
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G+ + F++ ++ K+G + I + + LC +G ++ A++ +++ +GF
Sbjct: 402 DGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFS 461
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI-EG---PNVIMYSTIIDSLCK 258
+D V+ ++L+ G K G +L++ I EG PNV+ ++ +++ K
Sbjct: 462 VDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLK 511
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 4/181 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P I ++ ++ L A+ + ++++ G PD T ILI C ++ A +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
G + G+ P+TI+ N L+ G V A + + +V +G R +Y LI+GL +
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 228 TGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHLMLSL 283
G A L ++ + I +S + LC+ + A L EM F + L
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 284 I 284
I
Sbjct: 467 I 467
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 137 ELKGIRP---DIVTSSILINCYCHLGQLTSAFSVMGNILKRG------YQPNTIILNTLM 187
+LKG++ D + +I I+ + G L +A S+ + +R + P+ N+L+
Sbjct: 237 KLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLI 296
Query: 188 KGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG---- 243
LCL G + A+ D++ G D +Y LI G CK+ A+R+ +++
Sbjct: 297 HVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFV 356
Query: 244 PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
P+ I+Y+ ++D K + V++A L+ +MV
Sbjct: 357 PDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ +++S +K ++ TA + QM DI T +++I +G+ A +V+ +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
K+G + ++ NTL+ L + A + D + + G D VSY T+I K G +
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 233 AALRLLRQIEG----PNVIMYSTIIDSLCK 258
A + L+ + PN + TI+D L K
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ + Q P+++ FS ++ + A L +ME + I PD +T +ILI+
Sbjct: 221 ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILIS 280
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
G++ ++ + +G +PN ++ GL K A E +++ G R
Sbjct: 281 GLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTII 253
+SY ++ GLC+T +LRQ+ P +M+ ++
Sbjct: 341 SFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS F+ IL L+ K + + G+ D +ILI C G L +A +
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ ++ +PN + + L++G C KG + A + + + + D +++ LI+GL K
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 228 TGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
G + LL +++ PN Y ++ L K +A ++ S+M++
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMIS 335
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 40/214 (18%)
Query: 95 VSFFNRLLQMHPTPSIIEFSMILTSLLKMKH-YSTAISL--------------------- 132
+ F+++ + P ++ ++ +L +K+K+ Y AI L
Sbjct: 186 IKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLA 245
Query: 133 --------------SHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQP 178
QM+++G P+I S L+N Y G A +M + G P
Sbjct: 246 ICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVP 305
Query: 179 NTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL 238
N +++ TL+K G+ R+ E ++ + G+ +E+ Y L++GL K G A +
Sbjct: 306 NKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIF 365
Query: 239 RQIEGPNV----IMYSTIIDSLCKVKLVSDAYDL 268
++G V S +I +LC+ K +A +L
Sbjct: 366 DDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A +F ++ +P+I +S +L S Y A L +M+ G+ P+ V + L+
Sbjct: 255 EAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLL 314
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
Y G + ++ + GY N + LM GL G ++ A DD+ +G R
Sbjct: 315 KVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVR 374
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ----IEGPNVIMYSTIIDSLCKV 259
D + + +I+ LC++ + A L R E +++M +T++ + C+
Sbjct: 375 SDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRA 425
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVT-SSILINCYCHLGQLTSAFSVMGNILKR 174
IL+ L+K + I L QM+ G++PD+VT +++L C A ++G +
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHN 231
Query: 175 GYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAA 234
G Q ++++ T++ G + A F + +G + Y++L+N GD + A
Sbjct: 232 GIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA 291
Query: 235 LRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
L+ +++ PN +M +T++ K L + +L SE+ + +
Sbjct: 292 DELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 338
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 7/185 (3%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D + F +Q H S+ +S + + K+ S A+ + + + + ++ + ++
Sbjct: 116 DLIQLF-EWMQQHGKISVSTYSSCI-KFVGAKNVSKALEIYQSIPDESTKINVYICNSIL 173
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKG-LCLKGMVQRAMEFHDDVVAQGF 211
+C G+L S + + + G +P+ + NTL+ G + +K +A+E ++ G
Sbjct: 174 SCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGI 233
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQ--IEG--PNVIMYSTIIDSLCKVKLVSDAYD 267
++D V Y T++ G + A ++Q +EG PN+ YS++++S A +
Sbjct: 234 QMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADE 293
Query: 268 LYSEM 272
L +EM
Sbjct: 294 LMTEM 298
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQM-ELKGIRPDIVTSSILINCYCHLGQLTSAFSVMG 169
I ++++L K A L +M E GI PD+V+ +I+I+ + A +
Sbjct: 488 ITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFN 547
Query: 170 NILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG-FRLDEVSYATLINGLCKT 228
+ RG P I TLMK + G + A D+++ ++D +++ L+ G C+
Sbjct: 548 EMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRL 607
Query: 229 GDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
G A R++ +++ PNV Y ++ + + + + DA L+ E+
Sbjct: 608 GLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEI 655
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 114 SMILTSLLK--MKHYSTA-----ISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
S I T+L+K MK+ A + + + + PD VT + +++ + + G + A
Sbjct: 414 SRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQ 473
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ-GFRLDEVSYATLINGL 225
V+ + + G N I N L+KG C + + RA + ++ G D VSY +I+G
Sbjct: 474 VLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGC 533
Query: 226 CKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLC---KVKLVSDAYD 267
D+ AL ++ P I Y+T++ + + KL + +D
Sbjct: 534 ILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFD 582
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P ++ +++I+ + + + A++ ++M +GI P ++ + L+ + GQ A V
Sbjct: 521 PDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRV 580
Query: 168 MGNILKRGY-QPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ + + I N L++G C G+++ A + GF + +Y +L NG+
Sbjct: 581 FDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVS 640
Query: 227 KTGDTRAALRLLRQIE 242
+ AL L ++I+
Sbjct: 641 QARKPGDALLLWKEIK 656
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK--GIRPDIVTSSIL 151
A+ F ++ Q S + F+ +L + L K++ L ++ + I PD ++ IL
Sbjct: 121 AMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGIL 180
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I YC G A +M + +G + TI T++ L KG ++ A +++V +G
Sbjct: 181 IKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGC 240
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
LD +Y I K R L+ ++ P+ I Y+ ++ + C+ ++ +A
Sbjct: 241 ELDNAAYNVRIMSAQKESPERVK-ELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKK 299
Query: 268 LYS 270
+Y
Sbjct: 300 VYE 302
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F++L + TP+++ ++++L ++++ A + + M G++PDIV ++++
Sbjct: 281 EAQVLFDKLKERF-TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 339
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + A + + +G PN +++ C + ++ A+E+ DD+V G +
Sbjct: 340 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D Y LI G LL++++ P+ Y+ +I + K+ +
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 269 YSEMVAGE 276
Y++M+ E
Sbjct: 460 YNKMIQNE 467
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 74/184 (40%), Gaps = 35/184 (19%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F+ + P P++ +++++ K TAI M G++PD + LI
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLC-----------LKGMVQRAME 201
+ +L + + ++ + ++G+ P+ N L+K + M+Q +E
Sbjct: 410 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 469
Query: 202 ------------------------FHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
D+++ +G D+ SY LI GL G +R A R
Sbjct: 470 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 529
Query: 238 LRQI 241
L ++
Sbjct: 530 LEEM 533
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+AV + + +P ++ +++++ ++ A+ L +ME GI D+ T + +I
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTI-ILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
+ H G A + + G PN + I++ + CLK ++ + E H V GF
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK-VINQGSEVHSIAVKMGF 383
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSE 271
D + +L++ K G A ++ ++ +V ++++I C+ AY+L++
Sbjct: 384 IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTR 443
Query: 272 M 272
M
Sbjct: 444 M 444
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F++L + TP+++ ++++L ++++ A + + M G++PDIV ++++
Sbjct: 282 EAQVLFDKLKERF-TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 340
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + A + + +G PN +++ C + ++ A+E+ DD+V G +
Sbjct: 341 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
D Y LI G LL++++ P+ Y+ +I + K+ +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 269 YSEMVAGE 276
Y++M+ E
Sbjct: 461 YNKMIQNE 468
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 74/184 (40%), Gaps = 35/184 (19%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F+ + P P++ +++++ K TAI M G++PD + LI
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLC-----------LKGMVQRAME 201
+ +L + + ++ + ++G+ P+ N L+K + M+Q +E
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 470
Query: 202 ------------------------FHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRL 237
D+++ +G D+ SY LI GL G +R A R
Sbjct: 471 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 530
Query: 238 LRQI 241
L ++
Sbjct: 531 LEEM 534
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + ++ ++ L ++ A++L ++E KG++PD +T +IL++ G+ +
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
++++ + + N + GL ++ + + D + + D ++ +I G
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 228 TGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
G A+ ++IE P ++++++ ++CK + AY+L E+ A
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFA 345
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
+ R+++ + I ++ L L +SL +++ ++PD+ T + +I +
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
G+L A + I K G +P + N+L+ +C G ++ A E ++ A+ +DE
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV 354
Query: 218 YATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSL-CKVKL 261
+++ L K +Q E ++ + D L CK++L
Sbjct: 355 LQEVVDALVKGS---------KQDEAEEIVELAKTNDYLQCKLRL 390
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + F+++L+ K A + +M+ KG++PD+VT + LI+ YC ++ A+ +
Sbjct: 212 PDLQTFNILLSG---WKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKL 268
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC- 226
+ + + P+ I T++ GL L G +A E ++ G D +Y I C
Sbjct: 269 IDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCI 328
Query: 227 --KTGDTRAAL-RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGE 276
+ GD + ++++ PN Y+ L + +++LY M+ E
Sbjct: 329 ARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNE 381
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
+ +++ P I F+M+L +L K +L +M + ++PD T ++L +C +
Sbjct: 224 KRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVR 282
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLD---EV 216
A ++ +++ G++P + C GMV A + D ++ +G +
Sbjct: 283 DPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 217 SYATLINGLCKTGDTRAALRLL-RQIEG---PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
++A +I L K L+ R I P+V Y +I+ +C + V +AY EM
Sbjct: 343 TFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 402
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 86/215 (40%), Gaps = 42/215 (19%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
R ++ P F+++ +++ A+ L +M G +P+ T I+ +C G
Sbjct: 258 RRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG 317
Query: 160 QLTSA--------------------------------------FSVMGNILKRGYQPNTI 181
+ A F ++G ++ G P+
Sbjct: 318 MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS 377
Query: 182 ILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLL-RQ 240
+++G+C+ V A +F D++ +G+ D V+Y + LC+ T AL+L R
Sbjct: 378 TYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRM 437
Query: 241 IE---GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+E P+V Y+ +I ++ A++ ++EM
Sbjct: 438 VESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEM 472
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 144 DIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFH 203
D V +++I + G L A ++ + G P+ I +++ G C G + A
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 204 DDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIE--------GPNVIMYSTIIDS 255
++ L+ V+Y+ ++ G+CK+GD AL LL ++E PN + Y+ +I +
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 256 LCKVKLVSDA 265
C+ + V +A
Sbjct: 284 FCEKRRVEEA 293
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ + + + + +++++ + A L +M+ G+ PD++T + +I
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQG-- 210
N YC+ G++ A+ + + K N++ + +++G+C G ++RA+E ++ +
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGG 267
Query: 211 --FRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTII 253
+ V+Y +I C+ AL +L ++ PN + +I
Sbjct: 268 GLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A S + + + TP + FS ++ K A + + +GIR ++ S L+
Sbjct: 663 ACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMG 722
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C+ A + I +P +N L+ LC + +AME+ D++ G +
Sbjct: 723 ACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKP 782
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKL 261
+ ++Y+ L+ + D + +LL Q +G PN+IM I SLCK +
Sbjct: 783 NTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCIT-SLCKRRF 833
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP + +++ + S K + A S+ M+ K + PD V S LI+ H L AF
Sbjct: 643 TPEV--YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFG 700
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ + +G + TI ++LM C ++A+E ++ + + R + LI LC
Sbjct: 701 ILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALC 760
Query: 227 KTGDTRAALRLLRQIE----GPNVIMYSTII 253
+ A+ L +I+ PN I YS ++
Sbjct: 761 EGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 74/197 (37%), Gaps = 41/197 (20%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ +++S K + HQM G+ ++ T LI+ GQ+ AF G +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 173 KRGYQPNTIILN-------------------------------------TLMKGLCLKGM 195
+ +P+ ++ N LMK C G
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 196 VQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYST 251
V+RA E + + G R Y +N K+GD A + + ++ P+ + +S
Sbjct: 625 VERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSA 684
Query: 252 IIDSLCKVKLVSDAYDL 268
+ID K++ +A+ +
Sbjct: 685 LIDVAGHAKMLDEAFGI 701
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 9/177 (5%)
Query: 103 QMHP-TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIR--PDIVTSSILINCYCHLG 159
+ HP P I ++ + A + + GIR P++ T I +N G
Sbjct: 601 ETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYT--IAVNSCSKSG 658
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
A S+ ++ ++ P+ + + L+ M+ A D +QG RL +SY+
Sbjct: 659 DWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYS 718
Query: 220 TLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+L+ C D + AL L +I+ P + + +I +LC+ + A + E+
Sbjct: 719 SLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEI 775
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
+S++++ L K + + +M+ +G+ PD+ + LI C + A + +
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMF 459
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
G + N N L++ L +G + ++ D ++ +G DE Y +LI GLCK
Sbjct: 460 VEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIE 519
Query: 233 AALRLLRQ 240
AA+ + R+
Sbjct: 520 AAMEVFRK 527
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
P + ++ ++ + K + A L +M ++G + ++ T ++LI G+ +
Sbjct: 429 APDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLR 488
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR-LDEVSYATLINGL 225
+ +L+RG +P+ I +L++GLC + ++ AME + + + + + + L
Sbjct: 489 LFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNL 548
Query: 226 CKTGDTRAALRLLRQIE-----GPNVIMYSTIIDS 255
C G + A +LLR+ E G +V++ + D+
Sbjct: 549 CSNGHSGEASQLLREREHLEHTGAHVVLLKCVADA 583
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Query: 94 AVSFFNRLLQMHPTPS--IIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSIL 151
A+ FFN Q P S I + I SL + +S +L Q++ I D L
Sbjct: 65 ALGFFNWAAQ-QPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSL 123
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I+ + SAF V+ G + + + N L+ GL G A + + +G
Sbjct: 124 IDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGV 183
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTII-----DSLCKVKLVSDAY 266
L+ + + I C++ +T LRL+ +++ N+ + +II SLCK DA+
Sbjct: 184 SLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAF 243
Query: 267 DLYSEM 272
+ E+
Sbjct: 244 YILEEL 249
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 163 SAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
SA + ++ G P L+ L K LC ++ ++ + ++G+ + SY+ +I
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 223 NGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ LCK G R + L+++ EG P+V +Y+ +I++ CK +++ A L+ EM
Sbjct: 405 SFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
+RG NT+ TL++GL G A E ++V+ G D ++Y L++GLCK G
Sbjct: 9 QRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLE 68
Query: 233 AALRLLRQIEG-------------PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
AL + +G PNV+ Y+T+I CK +AY L+ +M
Sbjct: 69 KALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 95 VSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINC 154
+ F + Q + + ++ ++ L + A + +M G+ PDI+T +IL++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 155 YCHLGQLTSAFSVMGNILK----------RGYQPNTIILNTLMKGLCLKGMVQRAMEFHD 204
C G+L A V G + +G +PN + T++ G C KG + A
Sbjct: 61 LCKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 205 DVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQI 241
+ G D +Y TLI + GD A+ L++++
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 130 ISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKG 189
+ L +M +G+ + VT + LI G A + ++ G P+ + N L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 190 LCLKGMVQRAM-----EFHDDVVA----QGFRLDEVSYATLINGLCKTGDTRAALRLLRQ 240
LC G +++A+ E D+ +G + + V+Y T+I+G CK G A L R+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 241 IEG----PNVIMYSTII 253
++ P+ Y+T+I
Sbjct: 121 MKEDGPLPDSGTYNTLI 137
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 163 SAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
+A + + ++ + G P+ + TL+ G + G + +A E ++ +G + +Y ++I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 223 NGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
GLC G+ R A LL+++E PN ++YST++ L K +S+A + EMV
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMV 821
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 131 SLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGL 190
+L+H E+ GI P ++ + LI+ Y G+L A + + +G PN N++++GL
Sbjct: 711 TLNHMKEV-GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGL 769
Query: 191 CLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQI 241
C+ G + A ++ ++G + V Y+TL+ L K G A ++++++
Sbjct: 770 CMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP ++ ++ + + K + + +M G P++VT +I+++ Q+ A
Sbjct: 305 TPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALG 364
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
V + + G P+ ++L+ L G + A E +D+ QG R D + Y T+I+
Sbjct: 365 VYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAAL 424
Query: 227 KTGDTRAALRLLRQIE-------GPNVIMYSTII 253
ALRLL+++E PNV Y+ ++
Sbjct: 425 HHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 101 LLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK---GIRPDIVTSSILINCYCH 157
L+M + + ++ + SL+ +I +H++ LK I+PD T +ILI+ +C
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCK 285
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
+ A ++M + + P+ + + ++ C +G +R E +++ G + V+
Sbjct: 286 ARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVT 345
Query: 218 YATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
Y +++ L K+ AL + +++ P+ YS++I L K DA +++ +M
Sbjct: 346 YTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P F++++ K + + A ++ M++ PD+VT + + YC G +
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+ + + G PN + +M L V A+ ++ + G D Y++LI+ L K
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 228 TGDTRAALRLLRQIEGP----NVIMYSTII 253
TG + A + + +V++Y+T+I
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMI 420
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+R+ +++ ++ +++ L+ K S A L +M + ++V+ + +I
Sbjct: 95 EARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMI 147
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y G++ A + + +R N + N+++K L +G + AM + + R
Sbjct: 148 DGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMP----R 199
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
D VS+ +++GL K G A RL + N+I ++ +I + + +A L+ M
Sbjct: 200 RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM 259
Query: 273 VAGEFHLMLSLI 284
+F ++I
Sbjct: 260 PERDFASWNTMI 271
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ +F R+ + P + +S IL K +SL + G +PD + S+L
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ G V+ + +PN ++ NTL++ + G A ++++ G
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGP----NVIMYSTIIDSLCKVKLVSDAYDLY 269
+E + L+ K R AL+L +++ + I+Y+T+++ + L +A L+
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLF 419
Query: 270 SEM 272
++M
Sbjct: 420 NDM 422
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
I +S I+T + Y+ AI +M G+ PD VT S +++ Y G++ S+
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
+ G++P+ I + L K G ++ + + + V Y TL+ + + G
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 231 TRAALRLLRQ-IEG---PNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
A L + +E PN + ++ K + DA L+ EM A ++
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKW 392
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISL-SHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
P++ + I+ ++ + K YS +ISL + + I P++V+ + +IN +C G + A
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 167 VMGNILKRG-YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGL 225
V +IL + P+++ L KGL G + A +++++G D Y LI G
Sbjct: 238 VYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 226 CKTGDTRAALRLLRQIEGPNVIMYSTIIDS 255
GD A+ +++ +Y I+++
Sbjct: 298 LDLGDFDKAVEFFDELKS-KCTVYDGIVNA 326
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ ++ + +L++ +P + + +IL L + S A+ ++ +M+ +GI PD++T+++LI
Sbjct: 408 EGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLI 467
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRA 199
+ C L L AF N ++RG P I + GL KGM A
Sbjct: 468 HLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMA 514
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
F+ I+ L + S A+ + + + P IVT + L+ +C G L A ++ ++
Sbjct: 323 FNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
RG P T N K + M + ++ G D ++Y ++ LC+ G
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 233 AALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
A+++ ++++ P+++ + +I LC+++++ +A++ + V
Sbjct: 443 LAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV 487
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
PS+ F+++L + + A L +M+ ++P +VT LI YC + ++ A V
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDD--VVAQGFRLDEVSYATLINGL 225
+ + + N ++ N ++ GL G + A+ + V G + V+Y +L+
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTI--VTYNSLVKNF 365
Query: 226 CKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV-AGE---- 276
CK GD A ++L+ + P Y+ K + +LY +++ AG
Sbjct: 366 CKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDR 425
Query: 277 --FHLMLSLI 284
+HL+L ++
Sbjct: 426 LTYHLILKML 435
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 67/148 (45%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A +FN+++ P+ ++++L TA+ M+ +GI PD T + +IN
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMIN 298
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+C ++ A + + P+ + T++KG V + +++ + G
Sbjct: 299 GFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEP 358
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQI 241
+ +Y+TL+ GLC G A +L+ +
Sbjct: 359 NATTYSTLLPGLCDAGKMVEAKNILKNM 386
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
F +++ S K ++ + +M+ G+ I + + L G+ A ++
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
G +P N ++ G L ++ A+ F +D+ +G D+ ++ T+ING C+
Sbjct: 248 SEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 233 AALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
A +L +++ GP+V+ Y+T+I V V D ++ EM
Sbjct: 308 EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEM 351
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 4/186 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
++V F ++ + +I ++ + +L+ Y A ++M +G+ P T ++++
Sbjct: 203 ESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLML 262
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +L +A ++ RG P+ NT++ G C + A + ++
Sbjct: 263 WGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIG 322
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDL 268
VSY T+I G LR+ ++ PN YST++ LC + +A ++
Sbjct: 323 PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 269 YSEMVA 274
M+A
Sbjct: 383 LKNMMA 388
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMEL-KGIRPDIVTSSILINC 154
S F +++ P + + ++ + H + A+ + HQM + P+ T LI+
Sbjct: 274 SLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHG 333
Query: 155 YCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLD 214
C G+ +A ++ + +G+ PN N+L+ L G + A++ +++ G +D
Sbjct: 334 LCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVD 393
Query: 215 EVSYATLINGLCKTGDTRAALRLLRQIEGPNVI---MYSTIIDSLCK 258
+SY TL++ C+ G A RLL + ++ Y +++ L K
Sbjct: 394 FISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHK 440
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 142 RPDIVTSSILI--------NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLK 193
RP I T IL N Y + + + S+ ++ G +P+ LN L+KG L
Sbjct: 242 RPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLS 301
Query: 194 GMVQRAME-FHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIM 248
V A+ FH V + +Y LI+GLC G T A LL +++G PN
Sbjct: 302 LHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKS 361
Query: 249 YSTIIDSLCKVKLVSDAYDLYSEMVAG 275
Y++++++ + DA EM+
Sbjct: 362 YNSLVNAFALSGEIDDAVKCLWEMIEN 388
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 103 QMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLT 162
Q H S+ + M++ S K++ Y L + M K + ++ T I++ Y ++
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVD 185
Query: 163 SAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
A + K PN + N L+ LC V++A E +++ + F D +Y+ L+
Sbjct: 186 EAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILL 244
Query: 223 NGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDA 265
G K + A + R++ P+++ YS ++D LCK V +A
Sbjct: 245 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEA 291
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP +S++L K + A + +M G PDIVT SI+++ C G++ A
Sbjct: 234 TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 293
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ ++ +P T I + L+ + ++ A++ ++ G + D + +LI C
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 227 KTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
K + R+L++++ PN + I+ L + +A+D++ +M+
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 404
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
F +++ + + AI + ME + P++V + L++ C + A V N+
Sbjct: 171 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 230
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
R + P++ + L++G + + +A E +++ G D V+Y+ +++ LCK G
Sbjct: 231 DR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 233 AALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
AL ++R ++ P +YS ++ + + +A D + EM
Sbjct: 290 EALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEM 333
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 104 MHPT---PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
M P+ P+ +S+++ + A+ +ME G++ D+ + LI +C +
Sbjct: 298 MDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR 357
Query: 161 LTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL---DEVS 217
+ + + V+ + +G PN+ N +++ L +G A DV + ++ D +
Sbjct: 358 MKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF----DVFRKMIKVCEPDADT 413
Query: 218 YATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
Y +I C+ + A ++ + + P++ +S +I+ LC+ + A L EM+
Sbjct: 414 YTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI 473
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+S F + P ++ + L + A + +M G +P T + +I
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y LG L+ A + + K G +PN ++ +L+ G GMV+ A+++ + G +
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+ + +LI K G A R+ +++ GP+V ++++ + +VS+A ++
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Query: 270 SEM 272
+ +
Sbjct: 714 NAL 716
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA + F+ +L+ + F+ ++ + H S A SL +ME KGI PD T +IL+
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILL 382
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ + G + +A I K G P+T+ ++ LC + MV ++ R
Sbjct: 383 SLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIR 442
Query: 213 LDEVS 217
+DE S
Sbjct: 443 IDEHS 447
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 147 TSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDV 206
T + LI+ Y G+L A ++ +LK G +T+ NT++ G + A +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 207 VAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLV 262
+G D +Y L++ GD AAL R+I P+ + + ++ LC+ K+V
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 263 SDAYDLYSEM 272
++ + +EM
Sbjct: 427 AEVEAVIAEM 436
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 36/169 (21%)
Query: 141 IRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGY----QPNTIILNTLMK-------- 188
I+PD +T +I +C +G L A + ++ G+ + I+ TL+K
Sbjct: 211 IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEAS 270
Query: 189 ------------------------GLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLING 224
LC G + A + D++ +G +D +++A+LI G
Sbjct: 271 KVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYG 330
Query: 225 LCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
L A L+ +E P++ +Y +I L K+K S+A +++ +M+
Sbjct: 331 LLVKRRVVEAYGLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMI 379
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 131 SLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGL 190
SL+ QM+ G+ PD +++I Y ++ A V + G +PN + L+KG+
Sbjct: 209 SLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGV 268
Query: 191 CLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALR----LLRQIEGPNV 246
C KG V + + F+ ++ +G + Y LI L A+ +L P++
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDM 328
Query: 247 IMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ Y+T++ LC+ S+A ++ E
Sbjct: 329 LTYNTVLTELCRGGRGSEALEMVEEW 354
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 136 MELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGM 195
M+ +G+ + T +I I C + A +++ +L G +PNT+ + L+ G C +
Sbjct: 248 MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDD 307
Query: 196 VQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVI----MYST 251
+ A + +V +G + D Y TLI LCK GD AL L ++ N + + +
Sbjct: 308 FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKS 367
Query: 252 IIDSLCKVKLVSDAYDL 268
+++ L K V +A +L
Sbjct: 368 LVNGLAKDSKVEEAKEL 384
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 135 QMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKG 194
+ME KGI+P+ + ++I+ + + V+ + RG N ++ LC +
Sbjct: 212 EMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRK 271
Query: 195 MVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYS 250
+ A D +++ G + + V+Y+ LI+G C D A +L + + P+ Y
Sbjct: 272 KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYF 331
Query: 251 TIIDSLCKVKLVSDAYDLYSEMVAGEFHLMLSL 283
T+I LCK G+F LSL
Sbjct: 332 TLIYYLCK---------------GGDFETALSL 349
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 5/181 (2%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQM-ELKGIRPDIVTSSILINCYC 156
F L + + ++ + +L + L K Y A + +M ++ GI PD+ T + +I +C
Sbjct: 139 FRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFC 198
Query: 157 HLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEV 216
G +S++S++ + ++G +PN+ ++ G + + + +G +
Sbjct: 199 ESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVS 258
Query: 217 SYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+Y I LCK ++ A LL + PN + YS +I C +A L+ M
Sbjct: 259 TYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIM 318
Query: 273 V 273
V
Sbjct: 319 V 319
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 83/186 (44%), Gaps = 7/186 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P+I + +L + L+ Y + L + GI P+I+T +++ Y + + A
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 168 MGNILKRG-YQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ P+ L+KGL +++AME +D+ +GF +D V Y+ L+ G
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 227 KTGDTRAALRLLRQIEGP------NVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHLM 280
K D L+L ++++ + ++Y ++ ++ +A + Y E V +
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 281 LSLIMH 286
+S + +
Sbjct: 308 MSAMAY 313
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 9/175 (5%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRP-----DIVTSSILINCYCHLGQLTS 163
S + ++ +L +L + + A+ L ++ + P ++ T ++++N YC G+
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 164 AFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLIN 223
A V + P+T+ N LM LC ++ A + + ++ + + DE +Y L++
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 224 GLCKTG--DTRAAL--RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
K G D AA ++ PN+ +Y+ + D L K + DA + MV+
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVS 483
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F ++ +P + F+ ++ L + + A L +ME K ++PD T +L+
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ G++ + +++ +PN + N L L G + A F D +V++ +
Sbjct: 428 DTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LK 486
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKL 261
+D+ +Y ++ L + G L+++ ++ + + S + K +L
Sbjct: 487 MDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEEL 535
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK-GIRPDIVTSSILI 152
A F+ + +++ ++ F+ +L++ + K A+ ++ K GI PD+VT + +I
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
C G + S+ + K G++P+ I NTL++ + + D + ++
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLR--QIEG--PNVIMYSTII 253
+ SY + + GL + AL L+ + EG P+V Y+ +I
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALI 305
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
+P+I ++ + L + K ++ A++L M+ +GI PD+ T + LI Y L
Sbjct: 260 SPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMK 319
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ ++G P+T+ L+ LC KG + RA+E ++ + Y ++ L
Sbjct: 320 CYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLM 379
Query: 227 KTGDTRAALRLLRQ 240
G A +L++
Sbjct: 380 GAGKIDEATQLVKN 393
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 79/182 (43%), Gaps = 8/182 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D +S F L + P +I F+ +L + + + + M+ K + P+I + + +
Sbjct: 211 DILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRV 270
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ T A +++ + G P+ N L+ + ++ M+ ++++ +G
Sbjct: 271 RGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQ------IEGPNVIMYSTIIDSLCKVKLVSDAY 266
D V+Y LI LCK GD A+ + + + PN MY +++ L + +A
Sbjct: 331 PDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN--MYKPVVERLMGAGKIDEAT 388
Query: 267 DL 268
L
Sbjct: 389 QL 390
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 101 LLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
L ++ P +I+ + +LT +K + + A +L +M ++V+ ++++ C G+
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-----KNVVSWTVMLTALCDDGR 153
Query: 161 LTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHD-----DVVA-----QG 210
A + + +R N + NTL+ GL G +++A + D DVV+ +G
Sbjct: 154 SEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKG 209
Query: 211 FRLDE-----------------VSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTII 253
+ ++ V++ +++ G C+ GD R A RL ++ N++ ++ +I
Sbjct: 210 YIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMI 269
Query: 254 DSLCKVKLVSDAYDLYSEM 272
+L +A L+ EM
Sbjct: 270 SGFAWNELYREALMLFLEM 288
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + +S + T L + + M KG P + C G+L A SV
Sbjct: 296 PCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV 355
Query: 168 MGNILKRGYQ-PNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ-GFRLDEVSYATLINGL 225
+ + +G+ P + N L+KGLC G A+ + + Q +E +Y TL++GL
Sbjct: 356 INKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGL 415
Query: 226 CKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
C+ G A +++ ++ P V Y +I LC + +A EMV+
Sbjct: 416 CRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVS 468
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + +S + T L + + M KG P + C G+L A SV
Sbjct: 296 PCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV 355
Query: 168 MGNILKRGYQ-PNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ-GFRLDEVSYATLINGL 225
+ + +G+ P + N L+KGLC G A+ + + Q +E +Y TL++GL
Sbjct: 356 INKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGL 415
Query: 226 CKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
C+ G A +++ ++ P V Y +I LC + +A EMV+
Sbjct: 416 CRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVS 468
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ + ++L P P + + +L + +SL +ME +G+ PD T + ++
Sbjct: 61 ALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLK 120
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
L ++ F+ G +++ G+ N + N L+ G + A E DD +
Sbjct: 121 ACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSA----KA 176
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYS 270
+V+++++ +G K G A+RL ++ + + ++ +I K K + A +L+
Sbjct: 177 HKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFD 233
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 7/176 (3%)
Query: 104 MHPTPSIIE---FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
M T S+++ + +I+ SL K A L QM+ + +RP S L++ G+
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 161 LTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYAT 220
L ++ V + G++P+ + +L+ G + A+ D++ GFR + Y
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 221 LINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+I K+G A+ + + +E P YS +++ V A +Y+ M
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 4/185 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F ++ + PS FS ++ S+ K T++ + +M+ G RP LI+
Sbjct: 332 AFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLID 391
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y G+L +A + + K G++PN + +++ G ++ AM D+ GF
Sbjct: 392 SYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP 451
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
+Y+ L+ +G +A+++ + P + Y +++ L +LV A +
Sbjct: 452 TPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKIL 511
Query: 270 SEMVA 274
EM A
Sbjct: 512 LEMKA 516
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 8/176 (4%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
+I ++ ++T + + L H+M GIRPDI T ++ HL L S
Sbjct: 373 DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
G + GY NT I N LM G + A D + + D VS+ T++ G
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM----HKRDIVSWNTMLFGFGIH 488
Query: 229 GDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEFHLM 280
G + AL L ++ P+ + I+ + LV + L++ M G+F+++
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVI 544
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
+I+ F ++ +K + + ME + + D+ + +LI+ + G++ A ++
Sbjct: 245 NIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLV 304
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
+ + + + + N +M G G+V++ +E + ++ ++G ++ +Y L+NGLCK
Sbjct: 305 LMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKA 364
Query: 229 GDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAGEF 277
G A+ L ++ + MYST+ + +V ++ + ++ +EM+ F
Sbjct: 365 GKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGF 417
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 139 KGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQR 198
K +R + ++++N Y G + + + RG PN LM GLC G V
Sbjct: 310 KKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCE 369
Query: 199 AMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSL 256
AM F +++ F +DE Y+TL + G +L ++ ++ I +TI + L
Sbjct: 370 AMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERL 427
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%)
Query: 144 DIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFH 203
D+V+ + LIN Y +G+ A V + G +P+ + + L+ + G + R EF+
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 204 DDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVS 263
+ V G R+ L++ K GD A R+ +E ++ ++T+I + L+
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 264 DAYDLYSEMVAGEFHLMLSLI 284
+ L+ +M + L ++I
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMI 361
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 116 ILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRG 175
+ +L K A+ L Q++ K PD+V + ++ Y + GQ V +L G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 176 YQPNTIILNTLMKGLCLKGMVQR-AMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAA 234
PN + L+KGL G + A ++ +++ G + +Y + + G +A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 235 LRLLRQIEGPNVI 247
LL++++G +
Sbjct: 323 RELLQEMKGKGFV 335
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 140 GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRA 199
GI+ D + +++ Y G + +A + I + N N L+ GL + G +
Sbjct: 336 GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK----NVFTWNALLGGLAIHGHGLES 391
Query: 200 MEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG------PNVIMYSTII 253
+ + +++V GF+ + V++ +N C TG R +++ P + Y +I
Sbjct: 392 LRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMI 451
Query: 254 DSLCKVKLVSDAYDLYSEM 272
D LC+ L+ +A +L M
Sbjct: 452 DLLCRAGLLDEALELVKAM 470
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 77/169 (45%), Gaps = 8/169 (4%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ F ++ P++I + +L++L K K Y A + + M GI P++ + + +
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 154 CYCHLGQLTSAFSVMGNILK----RGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQ 209
GQ F+++ +LK +G +P+ + N ++ G G+ A E+ + ++
Sbjct: 537 VLT--GQ--QKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSE 592
Query: 210 GFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCK 258
+E++Y LI L R A L + + + + S D++ K
Sbjct: 593 NVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVK 641
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAI-SLSHQMELKGIRPDIVTSSIL 151
DA + + +++ P + ++++T+L K + + + +M KG++ L
Sbjct: 291 DAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGL 350
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
+ +C G A + + K+G + NTI+ NTLM ++ ++ +G
Sbjct: 351 VKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGL 410
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSD 264
+ +Y L++ + LLR++E PNV Y+ +I + + K +SD
Sbjct: 411 KPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSD 467
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F R+ ++ PS ++ ++ + + A + +M +GI+P + T + +++
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLD 528
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ G + +L+ + I NTL+ G +G+ A + + G +
Sbjct: 529 AFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYDLY 269
++Y L+N + G +LL+++ P+ I YST+I + +V+ A+ +
Sbjct: 589 SVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYH 648
Query: 270 SEMV 273
MV
Sbjct: 649 KMMV 652
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ +F+++LQ P+ FS +L++ + + + ++ I D+ + L+
Sbjct: 421 EALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLV 480
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ YC G A+ + I +PN + NT++ G G ++A++ + + G
Sbjct: 481 SMYCKCGNTNDAYKIFSCI----SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKE 536
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG-----PNVIMYSTIIDSLCKVKLVSDAYD 267
+ V++ L++ G + + ++ P Y+ ++D L + L+ DA +
Sbjct: 537 PNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASN 596
Query: 268 LYSEM 272
L S M
Sbjct: 597 LISTM 601
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P + + I+ S ++ S + +L G++PDI T +ILI + G SV
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
M + KR + T+ N +++ G +++ + + QG + + ++Y +L+N K
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 228 TGDTRAALRLLRQIEGPNVIM----YSTIIDSLCKVKLVSDAYDLYSEM 272
G +LRQI +V++ ++ II++ + ++ +LY +M
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM 452
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 4/185 (2%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
S+++R M P I F++++ S K Y S+ ME + VT +I+I +
Sbjct: 307 SWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETF 366
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
G++ V + +G +PN+I +L+ G+V + +V LD
Sbjct: 367 GKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDT 426
Query: 216 VSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLYSE 271
+ +IN + GD L Q+E P+ I ++T+I + + +L +
Sbjct: 427 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQ 486
Query: 272 MVAGE 276
M++ +
Sbjct: 487 MISSD 491
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 79/185 (42%), Gaps = 8/185 (4%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A+ F R P+ F+ ++ + + + L ++ +G ++ ++ LI
Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALI 355
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y G + + V G I+ R N + ++M G G A+E D +V+ G R
Sbjct: 356 DMYAKCGNIPDSQRVFGEIVDR---RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIR 412
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE-----GPNVIMYSTIIDSLCKVKLVSDAYD 267
D + + +++ G L+ +E P+ +Y+ ++D L + + +AY+
Sbjct: 413 PDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYE 472
Query: 268 LYSEM 272
L M
Sbjct: 473 LVERM 477
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 125 HYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILN 184
+ T SL QM GI PD+ +NC G+ + ++ + +G+ PN N
Sbjct: 228 YMETVRSLFRQMVDSGIEPDVFA----LNCLVK-GRTINTRELLSEMKGKGFVPNGKSYN 282
Query: 185 TLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGP 244
+L+ L G + A++ +++ G +D +SY TL++ C+ G A RLL +
Sbjct: 283 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 342
Query: 245 NVIMYSTIIDSLCKVKL 261
++ IDS K+K+
Sbjct: 343 QLV----DIDSDDKLKM 355
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 125 HYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILN 184
+ T SL QM GI PD+ +NC G+ + ++ + +G+ PN N
Sbjct: 203 YMETVRSLFRQMVDSGIEPDVFA----LNCLVK-GRTINTRELLSEMKGKGFVPNGKSYN 257
Query: 185 TLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGP 244
+L+ L G + A++ +++ G +D +SY TL++ C+ G A RLL +
Sbjct: 258 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 317
Query: 245 NVIMYSTIIDSLCKVKL 261
++ IDS K+K+
Sbjct: 318 QLV----DIDSDDKLKM 330
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A F+++ P +I ++ ++ +K + A+ +M++ G++PD V +
Sbjct: 158 NAAKMFDKM----PERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
N +LG L+ V +L + ++ N + N+L+ C G V EF V +
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCV----EFARQVFYNMEK 269
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDA 265
VS+ ++I G G+ +L R+++ P+ + ++ + + V LV +
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP I + M++ S A+ + ME+KG+ I+ + ++ G + A S
Sbjct: 171 TPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAES 230
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
+ ++ +G + + N + K +R E +++ + G + D VSY L+ C
Sbjct: 231 LWIEMVNKGCDLDNTVYNVRLMNAA-KESPERVKELMEEMSSVGLKPDTVSYNYLMTAYC 289
Query: 227 KTGDTRAALRLLRQIEGPNVIMYSTIIDSLC 257
G A ++ +E PN + T+I LC
Sbjct: 290 VKGMMSEAKKVYEGLEQPNAATFRTLIFHLC 320
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 84/199 (42%), Gaps = 7/199 (3%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELK--GIRPDIVTSSIL 151
A+ F + ++ +++ F+ +L + L + L + + I PD ++ +L
Sbjct: 121 AMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGML 180
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
I YC G+ A +M ++ +G + I T++ L G+V A ++V +G
Sbjct: 181 IKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGC 240
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEG----PNVIMYSTIIDSLCKVKLVSDAYD 267
LD Y + K R L+ ++ P+ + Y+ ++ + C ++S+A
Sbjct: 241 DLDNTVYNVRLMNAAKESPERVK-ELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKK 299
Query: 268 LYSEMVAGEFHLMLSLIMH 286
+Y + +LI H
Sbjct: 300 VYEGLEQPNAATFRTLIFH 318
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 78/174 (44%), Gaps = 4/174 (2%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
+L + P S + ++ ++ + +S A+ L +M GI + VT + +I+ HLG
Sbjct: 128 KLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLG 187
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
+ + +K + + L+ CL ++ A + D++ + V++
Sbjct: 188 GIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL----VTWN 243
Query: 220 TLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
++NG K G A L QI +++ + T+ID + + +A Y+EM+
Sbjct: 244 VMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEML 297
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 17/191 (8%)
Query: 101 LLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQ 160
L + P + + +S ++T + +A+ L +M +K P + LI +
Sbjct: 158 LFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKN----ER 213
Query: 161 LTSAFSVMGNI--LKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDV-----------V 207
L+ A V+G L G + NTL+ G +G V+ A D +
Sbjct: 214 LSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 208 AQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYD 267
+ F + VS+ ++I K GD +A L Q++ + I ++T+ID V + DA+
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFA 333
Query: 268 LYSEMVAGEFH 278
L+SEM + H
Sbjct: 334 LFSEMPNRDAH 344
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 4/168 (2%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A F+ +LQ + + +++ + + A L +ME G+ P T + LI
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
+ G ++ RG P+ N ++K + V RA E + +GF
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVP 442
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLC 257
DE +Y+ LI G + D AL+L ++E P ++ ++I LC
Sbjct: 443 DEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLC 490
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+ V +R+ PS+I + ++ +L+ ++SL ++ +K + D + SI++
Sbjct: 252 EVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVV 311
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
G L SA V +L+RG+ N+ + ++ C KG V+ A ++ G
Sbjct: 312 YAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVS 371
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQI--EG--PNVIMYSTIIDSLCKVKLVSDAYDL 268
+ ++ LI G + G L + G P+ ++ ++ S+ K++ V+ A ++
Sbjct: 372 PYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEI 431
Query: 269 YSEMVAGEF 277
++ + F
Sbjct: 432 LTKSIDKGF 440
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMK--HYSTAISLSHQMELKGIRPDIVTSSIL 151
A+ F + M PS F ++T L + K + A +M G PD
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 152 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGF 211
+ C C +G A S + ++ K G+ P T+ + ++ LC G ++ A+ +
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTII 253
LD+ +Y ++++GL + GD + AL + ++ P V +Y+++I
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLI 896
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 63/136 (46%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
A+ N + ++ P + ++ ++ K K + +ME + P +VT + +I
Sbjct: 873 ALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMIC 932
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
Y LG++ A++ N+ +RG P+ + + LC + A++ +++ +G
Sbjct: 933 GYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
Query: 214 DEVSYATLINGLCKTG 229
+++ T+ GL + G
Sbjct: 993 STINFRTVFYGLNREG 1008
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 111 IEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGN 170
I ++ ++ ++ Y+ A+ L QM ++P V S +I HL L + G
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 171 ILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGD 230
+L+ G+ N I + L+ G ++ A + D + LDEVS+ +I G G
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV----LDEVSWTAIIMGHALHGH 424
Query: 231 TRAALRLL----RQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
A+ L RQ PN + + ++ + V LV +A+ ++ M
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM 470
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
R+ ++ P ++ ++ I+ + Y A+ + +M ++PD T S ++ +
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDD--VVAQGFRLDEVS 217
+ + G ++++G + I ++L+ M ++ D V ++ + D +S
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVD------MYAKSARIEDSERVFSRLYCRDGIS 310
Query: 218 YATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTII 253
+ +L+ G + G ALRL RQ+ P + +S++I
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 5/172 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A S F +L P + +++L + + H+M +G +P+ VT I I
Sbjct: 194 EARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRI 252
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +C A + ++ + + IL TL+ G + +A + D++ +G
Sbjct: 253 DGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLT 312
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVK 260
D +Y L++ L K GD A+++++++E P+ + + ++ + K K
Sbjct: 313 PDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSK 364
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 109 SIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVM 168
+ ++ ++ LLK + + +M ++G+ P+ T + + +C G + A +
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 169 GNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKT 228
+ + G+ P + N L+ LC V++A + + +G L +++TL N LC
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWK 475
Query: 229 GDTRAALRLL-----RQIEGPNVIMYSTIIDSLCKVKLVSDA 265
G A L+ R + P I II +LC V V DA
Sbjct: 476 GKPDMARELVIAAAERDLL-PKRIAGCKIISALCDVGKVEDA 516
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 114 SMILTSLLKMKHYSTAISLSHQMELKGIRP--DIVTSSILINCYCHLGQLTSAFSVMGNI 171
++I TSLL M Y +LS ++ P D+V S L++ G++ A + +
Sbjct: 136 AVIETSLLCM--YGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCM 193
Query: 172 LKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDT 231
+ G +P+ + + ++++G G ++ A H + + F LDE +L+ K GD
Sbjct: 194 VDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDL 253
Query: 232 RAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
++ R+ +I N + ++ +I S + + A +SEM+
Sbjct: 254 LSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI 295
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Query: 108 PSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSV 167
P +I ++ +++ M++ + M L G +PD+V+ + +I+ H Q AF
Sbjct: 216 PDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDA 275
Query: 168 MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCK 227
+L G PN+ + TL+ ++ E H V G + L++ K
Sbjct: 276 FKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGK 335
Query: 228 TGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVA-GE 276
G A+ L R+ + ++++I L A +L+ +M A GE
Sbjct: 336 CGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE 385
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 98 FNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCH 157
F+R+ + ++ +++I++ ++ AI + M L+ ++ D VT + L++
Sbjct: 332 FDRMFE----KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Query: 158 LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVS 217
L V ++ ++ + ++ +T+M G + A + D V + D +
Sbjct: 388 TENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLIL 443
Query: 218 YATLINGLCKTGDTRAALRLLR--QIEG--PNVIMYSTIIDSLCKVKLVSDAYDLYSEM 272
+ TL+ ++G + ALRL Q+EG PNVI ++ II SL + V +A D++ +M
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 117 LTSLLKMKHYSTAISLSHQMELK----GIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
L ++LK+ + +SL Q+ + G ++ S L+ Y ++G ++ A V +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
R NT++ N+LM GL GM++ A++ +G D VS+A +I GL + G +
Sbjct: 202 DR----NTVMYNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAK 252
Query: 233 AALRLLRQIE 242
A+ R+++
Sbjct: 253 EAIECFREMK 262
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F ++ +++ ++ +++ L+ A+ L +M+ KG+RP+ T S+++
Sbjct: 348 DALRLFK---EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ S V ++K Y+ ++ + L+ G V+ A + + +
Sbjct: 405 TAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK--- 457
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIID 254
D V+++ ++ G +TG+T AA+++ ++ PN +S+I++
Sbjct: 458 -DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 144 DIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAME-F 202
D+ + S LI+ Y G L +A N+ K + N + N+++ G ++ ++ F
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAM----NVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLF 631
Query: 203 HDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG-----PNVIMYSTIIDSLC 257
H+ V G R D++++ +I+ C GD +R R + P Y+ ++D
Sbjct: 632 HEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFG 691
Query: 258 KVKLVSDAYDLYSEM 272
+ +++AY+ M
Sbjct: 692 RAGRLTEAYETVKSM 706
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 5/149 (3%)
Query: 127 STAISLSH-QMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNT 185
S+A+ H Q+ +G+ D + + L++ Y G L SA+ + + R + N
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVR----DVASWNA 180
Query: 186 LMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPN 245
L+ GL AME + + +G R EV+ + GD + + N
Sbjct: 181 LIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN 240
Query: 246 VIMYSTIIDSLCKVKLVSDAYDLYSEMVA 274
VI+ + ID K V AY ++ +
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTG 269
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 89/182 (48%), Gaps = 18/182 (9%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
+A FN++ P+P + ++ ++T + A++L +M ++ D+V+ + +I
Sbjct: 53 EAREVFNQV----PSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR----DVVSWNSMI 104
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLK-GMVQRAMEFHDDVVAQGF 211
+ G + +A + + +R +++ T M C + G V +A + +
Sbjct: 105 SGCVECGDMNTAVKLFDEMPER-----SVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-- 157
Query: 212 RLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSE 271
D ++ ++++G + G AL+L +Q+ G NVI ++T+I L + + +A DL+
Sbjct: 158 --DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 272 MV 273
M+
Sbjct: 216 ML 217
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 54/110 (49%)
Query: 144 DIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFH 203
D+ + + +I+C+ G+ A + G + G++PN++ L + ++R E H
Sbjct: 172 DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIH 231
Query: 204 DDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTII 253
V +GF LDE + L++ K A + +++ +++ ++++I
Sbjct: 232 RKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMI 281
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 106 PTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAF 165
P P + F++++ K A+ L +M GI PD T L+ C HL +
Sbjct: 193 PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 166 SVMGNILKRG--YQPNTIILNTL--MKGLCLK-GMVQRAMEFHDDVVAQGFRLDEVSYAT 220
V G I +RG Y N I+ N L M C + G+ +RA + + D S+ T
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMK-------KKDMRSWNT 305
Query: 221 LINGLCKTGDTRAALRLLRQIEGPNVIMYSTII 253
++ G + GD AA + Q+ +++ +++++
Sbjct: 306 MVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLL 338
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 82/182 (45%), Gaps = 4/182 (2%)
Query: 96 SFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 155
+ NR+ P+++ F+ ++ + ++S M+ +GI D T + L+
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 156 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDE 215
L L V G +++ G+ I +++ G + A + D++ + +
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSER----NV 168
Query: 216 VSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMVAG 275
V + +I G C +GD L L +Q+ +++ ++++I SL K +A +L+ EM+
Sbjct: 169 VVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQ 228
Query: 276 EF 277
F
Sbjct: 229 GF 230
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 80/181 (44%), Gaps = 5/181 (2%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
DA+ F R+ + P+I + +L + + A+++ + G + ++ L+
Sbjct: 403 DALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y G L SA + I ++ + ++ L+ G + G A++ ++V G
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLR-QIEGPNVIM----YSTIIDSLCKVKLVSDAYD 267
+E+++ + +N +G L L R +E + Y+ I+D L + + +AY+
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582
Query: 268 L 268
L
Sbjct: 583 L 583
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 14/185 (7%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKG-IRPDIVTSSILI 152
+V F +L++ P + F +L S K+ +L H LK + D L+
Sbjct: 110 SVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL-HAATLKNFVDCDSFVRLSLV 168
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ Y GQL AF V R + + +I N L+ G C RA + H + FR
Sbjct: 169 DMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYC------RAKDMH--MATTLFR 220
Query: 213 ----LDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDL 268
+ S++TLI G +G+ A +L + NV+ ++T+I+ + A
Sbjct: 221 SMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAIST 280
Query: 269 YSEMV 273
Y EM+
Sbjct: 281 YFEML 285
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 10/185 (5%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D S + +M P ++ ++ ++ + A++L +M KGI+PD T L+
Sbjct: 171 DVASAYKVFDKM-PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 229
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +G LT V ++K G N N L+ G V+ A D++V +
Sbjct: 230 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK--- 286
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG-----PNVIMYSTIIDSLCKVKLVSDAYD 267
+ VS+ +LI GL G + A+ L + +E P I + I+ + +V + ++
Sbjct: 287 -NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 345
Query: 268 LYSEM 272
+ M
Sbjct: 346 YFRRM 350
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 140 GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRA 199
G + D+ S ++N Y G++ A + G + KR + I T++ G G +A
Sbjct: 146 GYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR----DVICWTTMVTGFAQAGKSLKA 201
Query: 200 MEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGP--------NVIMYST 251
+EF+ ++ +GF D V L+ GDT+ R + G NV++ ++
Sbjct: 202 VEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMG----RSVHGYLYRTGLPMNVVVETS 257
Query: 252 IIDSLCKVKLVSDAYDLYSEM 272
++D KV + A ++S M
Sbjct: 258 LVDMYAKVGFIEVASRVFSRM 278
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/187 (18%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILIN 153
AV + + ++ ++ ++ ++ + I + +M +G P++ T + +I
Sbjct: 243 AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIK 302
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAME---FHDDVVAQG 210
C G++ A+ ++ + KRG QP++I +CL +++ E ++ G
Sbjct: 303 LLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSG 356
Query: 211 FRLDEVSYATLINGLCKTGDTRAALRLLRQI----EGPNVIMYSTIIDSLCKVKLVSDAY 266
R +Y L+ + G + L + + + + P+ Y+ +ID+L + ++ A
Sbjct: 357 VRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAR 416
Query: 267 DLYSEMV 273
+ EM+
Sbjct: 417 EYEEEMI 423
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 107 TPSIIEFSMILTSLLKMKHYST-------AISLSHQMELKGIRPDIVTSSILINCYCHLG 159
TP + F+ +LT L + A+++ +M I+P ++ +IL++C
Sbjct: 240 TPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTR 299
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
++ + ++ + + G P+T +++ L L G + + D+++ +GFR + Y
Sbjct: 300 RVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYY 359
Query: 220 TLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIID----SLCKVKLVSDAYDLYSEMVAG 275
LI LC AL+L +++ +V Y + D LCK +L+ E ++
Sbjct: 360 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 419
Query: 276 EFHLMLSL 283
+ L S+
Sbjct: 420 DVTLSCSI 427
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP ++ ++ ++++L K + L + M LKG +P++ T ++ I + + A
Sbjct: 209 TPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDAND 268
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ + K +P++I N ++KG L A + + +G++ + Y T+I+ LC
Sbjct: 269 LLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLC 328
Query: 227 KTGDTRAALRL----LRQIEGPNVIMYSTIIDSLCK 258
K G+ A + +R+ PN+ ++ L K
Sbjct: 329 KAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVK 364
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 10/185 (5%)
Query: 93 DAVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILI 152
D S + +M P ++ ++ ++ + A++L +M KGI+PD T L+
Sbjct: 38 DVASAYKVFDKM-PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 96
Query: 153 NCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFR 212
+ +G LT V ++K G N N L+ G V+ A D++V +
Sbjct: 97 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK--- 153
Query: 213 LDEVSYATLINGLCKTGDTRAALRLLRQIEG-----PNVIMYSTIIDSLCKVKLVSDAYD 267
+ VS+ +LI GL G + A+ L + +E P I + I+ + +V + ++
Sbjct: 154 -NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
Query: 268 LYSEM 272
+ M
Sbjct: 213 YFRRM 217
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 13/187 (6%)
Query: 95 VSFFNRLLQMHPTPSIIE---------FSMILTSLLKMKHYSTAISLSHQMELKGIRPDI 145
VS + R+L M S+ + ++ + + + A SL +QM +K DI
Sbjct: 942 VSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVK----DI 997
Query: 146 VTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDD 205
++ + +I Y + A +V +++ G P+ + ++T++ G+++ E H
Sbjct: 998 ISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMY 1057
Query: 206 VVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEGPNVIMYSTIIDSLCKVKLVSDA 265
+ GF LD + L++ K G AL + + N+ +++II+ L +A
Sbjct: 1058 TLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEA 1117
Query: 266 YDLYSEM 272
++++M
Sbjct: 1118 LKMFAKM 1124
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 140 GIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRA 199
G ++ +S ++ Y G L ++ + + ++ N + NT++ G +
Sbjct: 293 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK----NLELWNTIISGFAKHARPKEV 348
Query: 200 MEFHDDVVAQGFRLDEVSYATLINGLCKTG---DTRAALRLLRQIEG--PNVIMYSTIID 254
M + + G +EV++++L++ TG + R +L+R G PNV+ YS ++D
Sbjct: 349 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 408
Query: 255 SLCKVKLVSDAYDL 268
L + L+S+AY+L
Sbjct: 409 ILGRAGLLSEAYEL 422
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP+ ++++L SLL+ I++ +M+ G D+ T +I+I+C + SA +
Sbjct: 525 TPT---YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACA 581
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ +++ G+ P + LMK L + A+ D + LD +SY T++
Sbjct: 582 LVSMMIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAF 641
Query: 227 KTG 229
+ G
Sbjct: 642 EKG 644
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 66/140 (47%)
Query: 103 QMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLT 162
++ T ++I ++ +++ ++ + TA+ L +++ +G++PD T + LI+ + LG++
Sbjct: 291 ELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVI 350
Query: 163 SAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
AF +L P+ L +L+ ++ E H V+ D +LI
Sbjct: 351 EAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLI 410
Query: 223 NGLCKTGDTRAALRLLRQIE 242
+ K G + A R+ + E
Sbjct: 411 DMYMKCGLSSWARRIFDRFE 430
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP+ ++++L SLL+ I++ +M+ G D+ T +I+I+C + SA +
Sbjct: 553 TPT---YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACA 609
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
++ +++ G+ P + LMK L + A+ D + LD +SY T++
Sbjct: 610 LVSMMIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAF 669
Query: 227 KTG 229
+ G
Sbjct: 670 EKG 672
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 113 FSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNIL 172
++ +L+SL K + I L +M +G+ P+ T +++++ Y G A G +
Sbjct: 261 YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMK 320
Query: 173 KRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTR 232
G+ P + ++++ G ++A+ ++D+ +QG + AT+++ KT +
Sbjct: 321 SLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYP 380
Query: 233 AALRLLRQIEGPNV----IMYSTIIDSLCKVKLVSDAYDLYSE 271
AL L +E + ++ II K+ L DA ++ E
Sbjct: 381 KALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEE 423
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 6/171 (3%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TPS + IL SL + A + M K + D+ + + +C+ G+L SA
Sbjct: 141 TPST--YHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASE 198
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLC 226
VM I + G P++ + L+ G C G V+ AM + G + ++A +I GL
Sbjct: 199 VMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLV 258
Query: 227 KTGDTRAALRLLRQIEGPNVIMYST----IIDSLCKVKLVSDAYDLYSEMV 273
+ G L + G ++ + S + L K K +A + EMV
Sbjct: 259 EGGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMV 309
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 114 SMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILK 173
+ I+ + + K + A++L +M+ K + P+ T +IL+N L L + G +LK
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLK 366
Query: 174 RGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRA 233
GY+ + ++ N L+ G ++ A + + FR D V++ T+I+G G R
Sbjct: 367 SGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMT---FR-DIVTWNTMISGCSHHGLGRE 422
Query: 234 AL----RLLRQIEGPNVIMYSTIIDSLCKVKLVSDAYDLYSEMV 273
AL R++ E PN I + ++ + + V +++++
Sbjct: 423 ALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLM 466
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 126 YSTAISLSHQMEL--KGIRPDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIIL 183
YS L M L + D V+ + LI+ Y +G +++ + + G T L
Sbjct: 193 YSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYAL 252
Query: 184 NTLMKGLCL---KGMVQRAMEFHDDVVAQGFRLDEVSYATLINGLCKTGDTRAALRLLRQ 240
+++K C+ +G +++ M H G D V L++ K G + A++L
Sbjct: 253 GSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSL 312
Query: 241 IEGPNVIMYSTIIDSLCKVKLVSD-----AYDLYSEM 272
+ NV+ Y+ +I ++ ++D A+ L+ +M
Sbjct: 313 MPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDM 349
>AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28618365-28622581 REVERSE
LENGTH=693
Length = 693
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 107 TPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 166
TP+ ++++L SLL+ I++ +M+ G D+ T +I+I+C + SA +
Sbjct: 557 TPT---YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACA 613
Query: 167 VMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYATLI 222
++ +++ G+ P + LMK L + A+ D + LD +SY T++
Sbjct: 614 LVSMMIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTIL 669
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 8/183 (4%)
Query: 95 VSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMEL-KGIRPDIVTSSILIN 153
+ F+R+ + P ++ ++ +L K S A +L ME KGI P++VT + LI
Sbjct: 322 LKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIK 381
Query: 154 CYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRL 213
C + A V +L++G P + M+ L + E + G
Sbjct: 382 PLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCEP 438
Query: 214 DEVSYATLINGLCKTGDTRAALRLLRQIE----GPNVIMYSTIIDSLCKVKLVSDAYDLY 269
+Y LI LC+ D L L +++ GP++ Y +I L + +AY Y
Sbjct: 439 TVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYY 498
Query: 270 SEM 272
EM
Sbjct: 499 KEM 501
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 94 AVSFFNRLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRP-DIVTSSILI 152
A++ F+ + I +F +L++L + K+ S A L + K P D + +I++
Sbjct: 216 AINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDK--YPFDAKSFNIVL 273
Query: 153 NCYCH-LGQLTSAFSV---MGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVA 208
N +C+ +G A V MGN+ G + + + ++++ G + + ++ D +
Sbjct: 274 NGWCNVIGSPREAERVWMEMGNV---GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 209 QGFRLDEVSYATLINGLCKTGDTRAALRLLRQIEG-----PNVIMYSTIIDSLCKVKLVS 263
+ D Y +++ L K A L++ +E PNV+ Y+++I LCK +
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 264 DAYDLYSEMV 273
+A ++ EM+
Sbjct: 391 EAKQVFDEML 400
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 100 RLLQMHPTPSIIEFSMILTSLLKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLG 159
R+ +I+ ++ IL + + Y A+ + H M + + D VT L+
Sbjct: 283 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 342
Query: 160 QLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKGMVQRAMEFHDDVVAQGFRLDEVSYA 219
Q S+ G I++RGY+ N + L++L+ +V A D + + D VS +
Sbjct: 343 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYK----DVVSCS 398
Query: 220 TLINGLCKTGDTRAALRLLRQI-EGPNVIMYSTIIDSLCKV 259
T+I+GL G + A+ + + + PN I +++++ C V
Sbjct: 399 TMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNA-CSV 438