Miyakogusa Predicted Gene

Lj2g3v0523260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0523260.1 tr|Q6QA01|Q6QA01_VIGRA CDPK-related protein
kinase OS=Vigna radiata PE=2 SV=1,52.7,0.00000000003, ,CUFF.34656.1
         (73 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12580.1 | Symbols: PEPKR1 | phosphoenolpyruvate carboxylase-...    54   2e-08

>AT1G12580.1 | Symbols: PEPKR1 | phosphoenolpyruvate
           carboxylase-related kinase 1 | chr1:4283635-4285675
           FORWARD LENGTH=522
          Length = 522

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 8/74 (10%)

Query: 8   MVSKSISKDRLVPLDDLRSVKADIEILTRQS--------RESFKLDGFVLSMMDLCVGRE 59
           +  KSISKDRLV  DD++S+K +I I+ + +        +  ++    V  +M+LC G E
Sbjct: 70  LACKSISKDRLVTQDDMKSIKLEIAIMAKLAGHPNVVNLKAVYEEKDSVHLVMELCAGGE 129

Query: 60  PYHRLEKHGQFSEI 73
            +H+LEK+G++SE+
Sbjct: 130 LFHKLEKYGRYSEV 143