Miyakogusa Predicted Gene
- Lj2g3v0523240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0523240.1 CUFF.34658.1
(364 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 2e-76
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 4e-75
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 4e-74
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 275 5e-74
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 5e-73
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 3e-72
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 8e-72
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 1e-71
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 1e-70
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 261 5e-70
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 4e-69
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 5e-69
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 8e-69
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 8e-65
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 8e-65
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 2e-63
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 2e-62
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 3e-62
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 4e-60
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 5e-59
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 3e-58
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 9e-57
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 217 1e-56
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 2e-56
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 210 1e-54
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 4e-54
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 6e-54
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 7e-50
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 7e-50
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 4e-48
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 185 4e-47
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 2e-46
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 178 6e-45
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 8e-45
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 4e-44
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 4e-44
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 7e-44
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 8e-44
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 6e-43
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 2e-42
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 2e-42
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 167 1e-41
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 2e-41
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 3e-41
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 6e-41
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 162 3e-40
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 6e-40
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 160 1e-39
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 3e-39
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 6e-39
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 157 1e-38
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 3e-38
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 5e-38
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 154 7e-38
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 7e-38
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 152 2e-37
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 152 3e-37
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 3e-37
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 5e-37
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 5e-37
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 6e-37
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 2e-36
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 7e-36
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 5e-35
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 9e-35
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 144 1e-34
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 1e-34
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 142 3e-34
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 142 3e-34
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 8e-34
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 1e-33
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 7e-33
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 8e-33
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 9e-33
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 4e-32
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 135 4e-32
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 7e-32
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 1e-31
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 3e-31
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 3e-31
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 8e-31
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 5e-30
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 5e-29
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 125 5e-29
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 7e-29
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 6e-28
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 7e-28
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 7e-28
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 7e-28
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 119 2e-27
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 5e-27
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 5e-27
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 115 5e-26
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 112 4e-25
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 8e-25
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 1e-24
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 110 1e-24
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 110 1e-24
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 110 1e-24
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 4e-23
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 5e-23
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 102 3e-22
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 4e-22
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 102 6e-22
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 100 2e-21
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 99 5e-21
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 94 1e-19
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 9e-19
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 9e-19
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 90 3e-18
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 4e-18
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 89 5e-18
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 89 6e-18
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 88 8e-18
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 8e-18
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 8e-18
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 87 1e-17
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 87 1e-17
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 87 2e-17
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 87 2e-17
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 86 3e-17
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 5e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 8e-17
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 9e-17
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 83 4e-16
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 1e-15
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 81 1e-15
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 80 2e-15
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 80 2e-15
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 79 3e-15
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 5e-15
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 7e-15
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 8e-15
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 76 4e-14
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 75 8e-14
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 75 1e-13
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 74 1e-13
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 74 2e-13
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 73 3e-13
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 72 4e-13
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 71 1e-12
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 71 1e-12
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 70 3e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 70 3e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 69 3e-12
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 6e-12
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 68 8e-12
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 8e-12
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 68 1e-11
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 67 2e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 67 2e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 67 2e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 67 2e-11
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 67 3e-11
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 65 6e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 63 3e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 63 4e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 61 9e-10
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 59 7e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-08
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 54 2e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 51 1e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 215/359 (59%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ F M+Q P + +FN++ +++ KTK Y ++L QME GI S+ T++I+I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDT-------------------------------- 128
NC+C +++ AFS + I+K GY+PDT
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 129 ---ITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
IT TL+ GLCL+GK+ A+ D ++ GF N+V+YG ++N +CK G+T+ A+EL
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
LR+++ R IK D V Y+ IID LCKD + +AF+L++EM KG +++TY+ LI GFC
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ LL +M + I P+V T+++L+D+ KEGK+REA +L M+++G+ P+ +T
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YNSL+DG+C N + +A + + M +G PD+ ++NI+ING CK D+ L L EM
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 173/324 (53%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ +RM++ P + VL + K+ + A+ L +ME IK V +I+I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C G +++AF++ + +G++ D IT+ TLI G C G+ + D++ +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V++ LI+ K G+ A +LL+ + RGI P+ + YN++ID CK+ + A +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
M++KG P+++T++ LI G+C ++ + L EM L+ + + TY LV +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GK+ AK + M+ + V+PD+V+Y L+DG C E+ KA ++F + + D+
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y III+G+C D+A +L +
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSL 534
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 162/291 (55%)
Query: 60 EFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
+++ ++ L K A +L ++ME G K ++T N LI +C+ G+ + +L +
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
+KR P+ +TF+ LI GK++ A Q +++ +G N ++Y +LI+G CK
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A++++ + +G PD++ +N +I+ CK + +L+ EM +G+ N VTY+ L
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
+ GFC G+L+ A L EM + + PD+ +Y IL+D L G++ +A + + K +
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
+ D+ Y ++ G C ++V+ A D+F ++ +G D +YNI+I+ LC+
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 168/324 (51%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + FN M I +N ++ + L M I P++VT ++LI
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + G++ A +L +++RG P+TIT+ +LI G C +++ A+Q D ++++G
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +++ LING CK LEL R + RG+ + V YNT++ C+ + A L
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EMV++ + P++V+Y L+ G C G+L++A+ + ++ ++ D+ Y I++ +
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
KV +A ++ + +GVK D YN ++ C + ++KA +F M++ G PD +
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YNI+I A A L+ EM
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEM 604
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 159/322 (49%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D M++ +P + F+ ++ S VK A L +M GI P+ +T N LI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +C ++ A ++ ++ +G PD +TF LI G C +I L+ ++ +G +
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y TL+ G C+ G+ A +L + + R ++PD+V Y ++D LC + + A ++
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ ++ + ++ Y +I+G C ++ A L + LK + D Y I++ L +
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ + +A + M ++G PD +TYN L+ + ++ A ++ M G DV +
Sbjct: 556 KDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615
Query: 341 YNIIINGLCKIKMADEALNLLA 362
++IN L ++ L++L+
Sbjct: 616 VKMVINMLSSGELDKSFLDMLS 637
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 217/359 (60%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI F M+ P + +F+++ +++ KTK Y ++L QME GI +L T++I+I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL----- 155
NC+C ++ AFS + I+K GY+P+TITF+TLI GLCL G++ AL+ D ++
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 156 -------------------AQGFLL-----------NQVSYGTLINGLCKLGETSAALEL 185
A+ LL N V+YG ++N +CK G+T+ A+EL
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
LR+++ R IK D V Y+ IID LCK + +AF+L++EM KGI+ N++TY+ LI GFC
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ LL +M + I+P+V T+++L+D+ KEGK+REA+ + MI +G+ PD +T
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y SL+DG+C N ++KA + + M +G P++ ++NI+ING CK D+ L L +M
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 178/359 (49%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ +RM++M P + N ++ L + + A+ L +M G +P+ VT ++
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C GQ A +L + +R + D + ++ +I GLC HG + A +++ +G
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N ++Y LI G C G +LLR + R I P+VV ++ +IDS K+ + A +L
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM+ +GI+P+ +TY++LI GFC L +A ++D M K DP++ T+ IL++ K
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP---- 336
++ + + M +GV D VTYN+L+ G+C + ++N A+++F M R P
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475
Query: 337 -------------------------------DVHSYNIIINGLCKIKMADEALNLLAEM 364
D+ YNIII+G+C D+A +L +
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 169/305 (55%)
Query: 60 EFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
+++ ++ L K A +L ++ME GI +++T NILI +C+ G+ + +L +
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
+KR P+ +TF+ LI GK++ A + H +++ +G + ++Y +LI+G CK
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A +++ + +G P++ +N +I+ CK + +L+ +M +G+ + VTY+ L
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I GFC +G+L A L EM + + P++ TY IL+D L G+ +A + + K +
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
+ D+ YN ++ G C ++V+ A D+F ++ +G P V +YNI+I GLCK EA
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 360 LLAEM 364
L +M
Sbjct: 565 LFRKM 569
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 172/324 (53%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + FN M T I +N ++ + L M I P++VT ++LI
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + G++ A + ++ RG PDTIT+T+LI G C + +A Q D ++++G
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N ++ LING CK LEL R++ RG+ D V YNT+I C+ ++ A +L
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EMV++ + PN+VTY L+ G C G+ ++A+ + +++ ++ D+ Y I++ +
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
KV +A ++ + +GVKP V TYN ++ G C +++A+ +F M + G PD +
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YNI+I A +++ L+ E+
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEEL 604
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 157/322 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D M++ P + F+ ++ S VK A L +M GI P +T LI
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +C ++ A ++ ++ +G P+ TF LI G C +I L+ + +G +
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y TLI G C+LG+ + A EL + + R + P++V Y ++D LC + A ++
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ ++ + ++ Y+ +I+G C ++ A L + LK + P V TY I++ L K
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G + EA+ + M + G PD TYN L+ + + K+ + + + G + D +
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 615
Query: 341 YNIIINGLCKIKMADEALNLLA 362
++I+ L ++ L++L+
Sbjct: 616 IKMVIDMLSDGRLKKSFLDMLS 637
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%)
Query: 143 KIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYN 202
K A+ D++ L + + L + + K + L L ++++ +GI ++ +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 203 TIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLK 262
+I+ C+ + + AF +++ G PN +T+S LI G C+ G++ +A+ L+D M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 263 NIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKA 322
PD+ T LV+ L GK EA ++ M++ G +P+ VTY +++ C + A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 323 QDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ M +R D Y+III+GLCK D A NL EM
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 211/359 (58%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ F M + P + +F+++ + + +TK Y + L QME GI +L T++I+I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF--------H- 151
NC C +++ AFS + I+K GY+PDT+TF+TLI GLCL G++ AL+ H
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 152 --------------------------DDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
D ++ GF N+V+YG ++ +CK G+T+ A+EL
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
LR+++ R IK D V Y+ IID LCKD + +AF+L++EM KG +++ Y+ LI GFC
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ LL +M + I PDV ++ L+D KEGK+REA+ + MI++G+ PD VT
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y SL+DG+C N+++KA + + M +G P++ ++NI+ING CK + D+ L L +M
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 177/323 (54%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A S +++++ P F+ ++ L S A+ L +M G KP+L+T+N L+N
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C G+++ A ++ +++ G+QP+ +T+ ++K +C G+ A++ + + L
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ V Y +I+GLCK G A L ++ +G K D+++Y T+I C L
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
+M+ + I+P+VV +SALI F G+L++A L EM + I PD TYT L+D KE
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
++ +A +ML +M+ +G P++ T+N L++GYC N ++ ++F MS RG D +Y
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
N +I G C++ + A L EM
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEM 448
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 170/324 (52%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ +RM++ P + VL + K+ + A+ L +ME IK V +I+I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C G +++AF++ + +G++ D I +TTLI+G C G+ + D++ +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V++ LI+ K G+ A EL + + RGI PD V Y ++ID CK+ + A +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
MV+KG PN+ T++ LI G+C + + L +M L+ + D TY L+ +
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GK+ AK + M+ + V+PD+V+Y L+DG C E KA ++F + + D+
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YNIII+G+C D+A +L +
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSL 518
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 172/323 (53%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ +M + +++ ++ L K A +L ++ME G K ++ LI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+C+ G+ + +L ++KR PD + F+ LI GK++ A + H +++ +G
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ V+Y +LI+G CK + A +L + +G P++ +N +I+ CK L+ +L+
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
+M +G+ + VTY+ LI GFC +G+L+ A L EM + + PD+ +Y IL+D L
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
G+ +A + + K ++ D+ YN ++ G C ++V+ A D+F ++ +G PDV +Y
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
NI+I GLCK EA L +M
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKM 553
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 161/307 (52%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + FN M I + ++ + L M I P +V + LI
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+C+ G++ A + +++RG PDT+T+T+LI G C ++ +A D ++++G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N ++ LING CK LEL R++ RG+ D V YNT+I C+ + A +L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EMV++ + P++V+Y L+ G C G+ ++A+ + +++ ++ D+ Y I++ +
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
KV +A ++ + +GVKPDV TYN ++ G C +++A +F M + G +P+ +
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 341 YNIIING 347
YNI+I
Sbjct: 565 YNILIRA 571
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 157/322 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D M++ TP + F+ ++ VK A L +M GI P VT LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +C Q++ A +L ++ +G P+ TF LI G C I L+ + +G +
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y TLI G C+LG+ A EL + + R ++PD+V Y ++D LC + A ++
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ ++ + ++ Y+ +I+G C ++ A L + LK + PDV TY I++ L K
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G + EA + M + G P+ TYN L+ + + K+ + + + G + D +
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Query: 341 YNIIINGLCKIKMADEALNLLA 362
++++ L ++ L++L+
Sbjct: 600 VKMVVDMLSDGRLKKSFLDMLS 621
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 275 bits (702), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 206/321 (64%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI+ F M++ P + +F++ +++ +TK ++ + Q+E GI ++ T+NI+I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
NC+C + A+SVL ++K GY+PDT TF TLIKGL L GK+ A+ D ++ G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y +++NG+C+ G+TS AL+LLR+++ R +K DV Y+TIIDSLC+D + A L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM KGI +VVTY++L+ G C G+ LL +M + I P+V T+ +L+D K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
EGK++EA + MI +G+ P+++TYN+LMDGYC+ N +++A ++ + M + +PD+ +
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 341 YNIIINGLCKIKMADEALNLL 361
+ +I G C +K D+ + +
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVF 391
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 174/325 (53%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
+A+ +RM++ P + +N ++ + ++ S A+ L +ME +K + T + +
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 234
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ C G I++A S+ + +G + +T+ +L++GLC GK D++++
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ N +++ L++ K G+ A EL + + RGI P+++ YNT++D C +S A +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ MV SP++VT+++LI G+C+V ++ + + + + + + TY+ILV
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
+ GK++ A+ + M+ GV PDV+TY L+DG C ++ KA ++F + + +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
Y II G+CK ++A NL +
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSL 499
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 172/326 (52%), Gaps = 6/326 (1%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ +M + +F ++ ++ SL + AISL +ME GIK S+VT N L+
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C G+ N +L ++ R P+ ITF L+ GK+Q A + + +++ +G
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 162 NQVSYGTLINGLC---KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
N ++Y TL++G C +L E + L+L+ R + PD+V + ++I C K V
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNK---CSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
++ + +G+ N VTYS L+ GFC G++K A L EM + PDV TY IL+D L
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
GK+ +A + + K + +V Y ++++G C +V A ++F ++ +G P+V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
+Y ++I+GLCK EA LL +M
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKM 534
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 157/300 (52%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
M+ P + FN +L VK A L +M GI P+++T N L++ YC +
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
++ A ++L +++ PD +TFT+LIKG C+ ++ ++ ++ +G + N V+Y
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
L+ G C+ G+ A EL + + G+ PDV+ Y ++D LC + + A +++ ++
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
+ +V Y+ +I G C G+++ A L + K + P+V TYT+++ L K+G + EA
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+L M + G P+ TYN+L+ + ++ + + M G + D S ++I+ L
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 143/297 (48%), Gaps = 11/297 (3%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + M+ +P I +N ++ S A ++ M P +VT LI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
YC + +++ V I KRG + +T++ L++G C GKI+ A + ++++ G L
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ ++YG L++GLC G+ ALE+ +Q + +VMY TII+ +CK V A++L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ + KG+ PNV+TY+ +I G C G L +A LL +M P+ TY L+ A +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMD-----------GYCLVNEVNKAQDVF 326
+G + + ++ M G D + ++D YCL QD+
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLL 612
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%)
Query: 110 NSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTL 169
+ A ++ +++ P + F+ + + L F + G N + +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 170 INGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGI 229
IN C+ +T A +L ++ G +PD +NT+I L + VS A L MV G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 230 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKN 289
P+VVTY++++ G C G A+ LL +M +N+ DV+TY+ ++D+L ++G + A +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 290 MLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
+ M +G+K VVTYNSL+ G C + N + M R P+V ++N++++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 350 KIKMADEALNLLAEM 364
K EA L EM
Sbjct: 310 KEGKLQEANELYKEM 324
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 271 bits (693), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 204/359 (56%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI F M+Q P +FN++ +++ +TK Y + ME GI+ + TM I+I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTL-------------------------- 134
NCYC ++ AFSVL K GY+PDTITF+TL
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 135 ---------IKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
I GLCL G++ AL D ++ GF ++V+YG ++N LCK G ++ AL+L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
R+++ R IK VV Y+ +IDSLCKD A L++EM KGI +VVTYS+LI G C
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ +L EM +NI PDV T++ L+D KEGK+ EAK + MI +G+ PD +T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YNSL+DG+C N +++A +F+ M +G PD+ +Y+I+IN CK K D+ + L E+
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 174/324 (53%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ +RM++ P + VL L K+ + + A+ L +ME IK S+V +I+I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C G + A S+ + +G + D +T+++LI GLC GK + +++ + +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V++ LI+ K G+ A EL + RGI PD + YN++ID CK+ + A +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ MV+KG P++VTYS LI +C ++ + L E+ K + P+ TY LV +
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GK+ AK + M+ +GV P VVTY L+DG C E+NKA ++F M + T +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YNIII+G+C D+A +L +
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSL 516
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 179/327 (54%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A+ F +M + + +++ V+ SL K + A+SL ++ME GIK +VT +
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI C+ G+ + +L ++ R PD +TF+ LI GK+ A + +++++ +
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + ++Y +LI+G CK A ++ + +G +PD+V Y+ +I+S CK K V
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L+ E+ +KG+ PN +TY+ L+ GFC G+L A L EM + + P V TY IL+D
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L G++ +A + M K + + YN ++ G C ++V+ A +F ++S +G PD
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
V +YN++I GLCK EA L +M
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 178/324 (54%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ +RM++M P + + ++ L S A+ L +M G +P VT ++
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G A + + +R + + ++ +I LC G AL +++ +G
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y +LI GLC G+ ++LR + GR I PDVV ++ +ID K+ + A +L
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y+EM+ +GI+P+ +TY++LI GFC L +A + D M K +PD+ TY+IL+++ K
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+V + + + +G+ P+ +TYN+L+ G+C ++N A+++F M RG P V +
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y I+++GLC ++AL + +M
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKM 481
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 161/322 (50%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D M+ P + F+ ++ VK A L ++M GI P +T N LI
Sbjct: 298 DGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +C ++ A + ++ +G +PD +T++ LI C ++ ++ ++ ++G +
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N ++Y TL+ G C+ G+ +AA EL + + RG+ P VV Y ++D LC + ++ A ++
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 477
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ +M ++ + Y+ +I+G C ++ A L + K + PDV TY +++ L K
Sbjct: 478 FEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G + EA + M + G PD TYN L+ + + + + ++ M G + D +
Sbjct: 538 KGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597
Query: 341 YNIIINGLCKIKMADEALNLLA 362
++I+ L ++ L++L+
Sbjct: 598 IKMVIDMLSDRRLDKSFLDMLS 619
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%)
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
++N A + +++ P I F L + + L F + G + +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
+IN C+ + A +L R G +PD + ++T+++ C + VS A L MV
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
P++VT S LI G C+ G++ +A+ L+D M PD TY +++ L K G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
++ M ++ +K VV Y+ ++D C + A +FN M +G DV +Y+ +I G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 348 LCKIKMADEALNLLAEM 364
LC D+ +L EM
Sbjct: 290 LCNDGKWDDGAKMLREM 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%)
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
D V+ A DL+ M+ P + ++ L Q +G M L I+ D+YT
Sbjct: 48 DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
TI+++ ++ K+ A ++L K G +PD +T+++L++G+CL V++A + + M
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 331 QRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + PD+ + + +INGLC EAL L+ M
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 206/359 (57%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI F M++ P I EFNK+L+++ K K + ISL +M+ I L T NILI
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 101 NCYCHLGQINSAFSVLAGILK-----------------------------------RGYQ 125
NC+C QI+ A ++L ++K GY+
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
PDTITFTTLI GL LH K A+ D ++ +G N V+YG ++NGLCK G+T AL L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L +++ I+ DVV++NTIIDSLCK + V A +L+ EM KGI PNVVTYS+LI C
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ A LL +M K I+P++ T+ L+DA KEGK EA+ + MIK+ + PD+ T
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YNSL++G+C+ + ++KA+ +F M + PDV +YN +I G CK K ++ L EM
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 175/323 (54%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A++ N+M + FN ++ SL K +H A++L +ME GI+P++VT + LI+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C C G+ + A +L+ ++++ P+ +TF LI GK A + +DD++ +
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +Y +L+NG C A ++ + + PDVV YNT+I CK K V +L+
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM +G+ + VTY+ LI G G A + +M + PD+ TY+IL+D L
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GK+ +A + M K +K D+ Y ++++G C +V+ D+F ++S +G P+V +Y
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
N +I+GLC ++ EA LL +M
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKM 566
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 170/324 (52%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA++ ++M++M P F ++ L S A++L +M G +P+LVT +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G + A ++L + + D + F T+I LC + + AL ++ +G
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y +LI+ LC G S A +LL + + I P++V +N +ID+ K+ A L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y +M+ + I P++ TY++L+ GFC+ +L +A + + M K+ PDV TY L+ K
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+V + + M +G+ D VTY +L+ G + + AQ VF M G PD+ +
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y+I+++GLC ++AL + M
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYM 496
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 169/324 (52%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ +RM+Q P + + V+ L K A++L ++ME I+ +V N +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C ++ A ++ + +G +P+ +T+++LI LC +G+ A Q D++ +
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V++ LI+ K G+ A +L + R I PD+ YN++++ C + A +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ MV+K P+VVTY+ LI GFC +++ L EM + + D TYT L+ L
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G A+ + M+ GV PD++TY+ L+DG C ++ KA +VF+ M + D++
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y +I G+CK D+ +L +
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSL 531
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 156/322 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + M++ P + FN ++ + VK + A L M I P + T N L+
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N +C +++ A + ++ + PD +T+ TLIKG C +++ + ++ +G +
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y TLI GL G+ A ++ +++ G+ PD++ Y+ ++D LC + + A ++
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ M I ++ Y+ +I G C G++ L + LK + P+V TY ++ L
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ ++EA +L M + G P+ TYN+L+ + + + ++ M D +
Sbjct: 553 KRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Query: 341 YNIIINGLCKIKMADEALNLLA 362
++ N L ++ L++L+
Sbjct: 613 IGLVANMLHDGRLDKSFLDMLS 634
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 132/260 (50%)
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
H +++ A + G++K P + F L+ + K + + + +
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y LIN C+ + S AL LL ++ G +P +V +++++ C K +S A L +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
V G P+ +T++ LI+G + + +A+ L+D M + P++ TY ++V+ L K G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
A N+L M ++ DVV +N+++D C V+ A ++F M +G P+V +Y+ +
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 345 INGLCKIKMADEALNLLAEM 364
I+ LC +A LL++M
Sbjct: 302 ISCLCSYGRWSDASQLLSDM 321
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 35/209 (16%)
Query: 191 GRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLK 250
GR Y I+ + D + A L+ MV P++V ++ L+ + +
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 251 QAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
I L ++M I +YTY IL++ + ++ A +L M+K G +P +VT +SL+
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 311 DGYC-----------------------------------LVNEVNKAQDVFNAMSQRGET 335
+GYC L N+ ++A + + M QRG
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
P++ +Y +++NGLCK D ALNLL +M
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 267 bits (683), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 207/359 (57%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ F M++ P I EFNK+L+++ K + ISL QM+ GI L T +I I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPD--------------------------------- 127
NC+C Q++ A +VLA ++K GY+PD
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 128 --TITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
T TFTTLI GL LH K A+ D ++ +G + V+YGT++NGLCK G+ AL L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L +++ IK +VV++NTIIDSLCK + V A DL++EM KGI PNVVTY++LI C
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ A LL M K I+P+V T+ L+DA KEGK+ EA+ + MI++ + PD +T
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN L++G+C+ N +++A+ +F M + P++ +YN +ING CK K ++ + L EM
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 176/323 (54%), Gaps = 3/323 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A++ N+M + FN ++ SL K +H A+ L +ME GI+P++VT N LIN
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C C+ G+ + A +L+ +L++ P+ +TF LI GK+ A + H++++ +
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ ++Y LING C A ++ + + + P++ YNT+I+ CK K V +L+
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM +G+ N VTY+ +I GF G A + +M + D+ TY+IL+ L
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GK+ A + + K ++ ++ YN++++G C +V +A D+F ++S + PDV +Y
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTY 538
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
N +I+GLC ++ EA +L +M
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKM 561
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 160/325 (49%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
+A++ ++M+Q P + + V+ L K A++L ++ME IK ++V N +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ C + A + + +G +P+ +T+ +LI LC +G+ A + ++L +
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N V++ LI+ K G+ A +L + R I PD + YN +I+ C + A
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
++ MV+K PN+ TY+ LI GFC +++ + L EM + + + TYT ++
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
+ G A+ + M+ V D++TY+ L+ G C +++ A +F + + ++
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
YN +I G+CK EA +L +
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSL 529
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 134/267 (50%)
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
IL N + +++ A + ++K P + F L+ + K + + + +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + +Y IN C+ + S AL +L ++ G +PD+V +++++ C K +S A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L +MV G P+ T++ LI+G + + +A+ L+D+M + PD+ TY +V+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L K G + A N+L M +K +VV +N+++D C V A D+F M +G P+
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
V +YN +IN LC +A LL+ M
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNM 319
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 152/323 (47%), Gaps = 3/323 (0%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
DA + ML+ P + FN ++ + K A L +M I P +T N+L
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
IN +C +++ A + ++ + P+ T+ TLI G C +++ ++ ++ +G
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ N V+Y T+I G + G+ +A + +++ + D++ Y+ ++ LC + A
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALV 489
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
++ + + N+ Y+ +I G C G++ +A L + +K PDV TY ++ L
Sbjct: 490 IFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLC 546
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
+ ++EA ++ M + G P+ TYN+L+ + + ++ M G D
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAS 606
Query: 340 SYNIIINGLCKIKMADEALNLLA 362
+ +++ N L ++ LN+L+
Sbjct: 607 TISLVTNMLHDGRLDKSFLNMLS 629
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 203/351 (57%), Gaps = 35/351 (9%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
M++ P IFEFNK+L+++ K K + ISL +M+ GI +L T NILINC+C Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 109 INSAFSVLAGILK-----------------------------------RGYQPDTITFTT 133
I+ A ++L ++K GY+PDTITFTT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 134 LIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
LI GL LH K A+ D ++ +G N V+YG ++NGLCK G+ A LL +++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
I+ DVV++NTIIDSLCK + V A +L+ EM KGI PNVVTYS+LI C G+ A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 254 GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY 313
LL +M K I+P++ T+ L+DA KEGK EA+ + MIK+ + PD+ TYNSL++G+
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 314 CLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
C+ + ++KA+ +F M + PD+ +YN +I G CK K ++ L EM
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 173/323 (53%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A + N+M + FN ++ SL K +H A++L +ME GI+P++VT + LI+
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C C G+ + A +L+ ++++ P+ +TF LI GK A + HDD++ +
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +Y +LING C A ++ + + PD+ YNT+I CK K V +L+
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM +G+ + VTY+ LI G G A + +M + PD+ TY+IL+D L
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GK+ +A + M K +K D+ Y ++++G C +V+ D+F ++S +G P+V +Y
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
N +I+GLC ++ EA LL +M
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKM 491
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 167/324 (51%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ +RM+Q P + + V+ L K A +L ++ME I+ +V N +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C ++ A ++ + +G +P+ +T+++LI LC +G+ A Q D++ +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V++ LI+ K G+ A +L + R I PD+ YN++I+ C + A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ MV+K P++ TY+ LI GFC +++ L EM + + D TYT L+ L
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G A+ + M+ GV PD++TY+ L+DG C ++ KA +VF+ M + D++
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y +I G+CK D+ +L +
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSL 456
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 155/322 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + M++ P + FN ++ + VK + A L M I P + T N LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N +C +++ A + ++ + PD T+ TLIKG C +++ + ++ +G +
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y TLI GL G+ A ++ +++ G+ PD++ Y+ ++D LC + + A ++
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ M I ++ Y+ +I G C G++ L + LK + P+V TY ++ L
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ ++EA +L M + G PD TYN+L+ + + + ++ M D +
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 537
Query: 341 YNIIINGLCKIKMADEALNLLA 362
++ N L ++ L++L+
Sbjct: 538 IGLVANMLHDGRLDKSFLDMLS 559
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 209/359 (58%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI F M++ P IFEFNK+L+++ K K + ISL +M+ GI +L T NILI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 101 NCYCHLGQINSAFSVLAGILK-----------------------------------RGYQ 125
NC+C QI+ A ++L ++K GY+
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
PDTITFTTLI GL LH K A+ D ++ +G N V+YG ++NGLCK G+ A L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L +++ I+ +VV+Y+T+IDSLCK + A +L++EM KG+ PNV+TYS+LI C
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
+ A LL +M + I+P+V T+ L+DA KEGK+ EA+ + MIK+ + PD+ T
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y+SL++G+C+ + +++A+ +F M + P+V +YN +ING CK K DE + L EM
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 173/323 (53%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A + N+M + ++ V+ SL K +H A++L +ME G++P+++T + LI+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C C+ + + A +L+ +++R P+ +TF LI GK+ A + +D+++ +
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +Y +LING C A + + + P+VV YNT+I+ CK K + +L+
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM +G+ N VTY+ LI+GF A + +M + P++ TY L+D L K
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GK+ +A + + + ++P + TYN +++G C +V D+F ++S +G PDV Y
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
N +I+G C+ + +EA L +M
Sbjct: 544 NTMISGFCRKGLKEEADALFRKM 566
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 163/297 (54%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA++ F M P + ++ +++ L + +S A L M I P++VT N LI
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + G++ A + ++KR PD T+++LI G C+H ++ A + ++++
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y TLING CK +EL R + RG+ + V Y T+I + + +A +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ +MV+ G+ PN++TY+ L+ G C G+L++A+ + + + ++P +YTY I+++ + K
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
GKV + ++ + +GVKPDV+ YN+++ G+C +A +F M + G PD
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 133/260 (51%)
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
H +++ A + G++K P F L+ + K + + + G N
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y LIN C+ + S AL LL ++ G +P +V +++++ C K +S A L +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
V G P+ +T++ LI+G + + +A+ L+D M + P++ TY ++V+ L K G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
A N+L M ++ +VV Y++++D C + A ++F M +G P+V +Y+ +
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 345 INGLCKIKMADEALNLLAEM 364
I+ LC + +A LL++M
Sbjct: 302 ISCLCNYERWSDASRLLSDM 321
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 191 GRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLK 250
GR Y I+ + + A L+ MV P++ ++ L+ + +
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 251 QAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
I L ++M I ++YTY IL++ + ++ A +L M+K G +P +VT +SL+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 311 DGYC-----------------------------------LVNEVNKAQDVFNAMSQRGET 335
+GYC L N+ ++A + + M QRG
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
P++ +Y +++NGLCK D A NLL +M
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 261 bits (667), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 208/359 (57%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA++ F M++ P I EF+K+L+++ K + ISL QM+ GI + T +ILI
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 101 NCYCHLGQINSAFSVLAGILK-----------------------------------RGYQ 125
NC+C Q+ A +VL ++K GYQ
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
P+T+TF TLI GL LH K A+ D ++A+G + V+YG ++NGLCK G+T A L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L +++ ++P V++YNTIID LCK K + A +L+ EM KGI PNVVTYS+LI C
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ A LL +M + I+PDV+T++ L+DA KEGK+ EA+ + M+K+ + P +VT
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y+SL++G+C+ + +++A+ +F M + PDV +YN +I G CK K +E + + EM
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 174/323 (53%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A + N+M Q P + +N ++ L K KH A++L +ME GI+P++VT + LI+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C C+ G+ + A +L+ +++R PD TF+ LI GK+ A + +D+++ +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ V+Y +LING C A ++ + + PDVV YNT+I CK K V +++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM +G+ N VTY+ LI G G A + EM + P++ TY L+D L K
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GK+ +A + + + ++P + TYN +++G C +V D+F +S +G PDV +Y
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
N +I+G C+ +EA L EM
Sbjct: 540 NTMISGFCRKGSKEEADALFKEM 562
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 170/318 (53%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ ++M P FN ++ L S A++L +M G +P LVT +++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G + AF++L + + +P + + T+I GLC + + AL ++ +G
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y +LI+ LC G S A LL + R I PDV ++ +ID+ K+ + A L
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y EMV + I P++VTYS+LI GFC+ +L +A + + M K+ PDV TY L+ K
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+V E + M ++G+ + VTYN L+ G + + AQ++F M G P++ +
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 341 YNIIINGLCKIKMADEAL 358
YN +++GLCK ++A+
Sbjct: 469 YNTLLDGLCKNGKLEKAM 486
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 159/322 (49%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + M++ P +F F+ ++ + VK A L +M I PS+VT + LI
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N +C +++ A + ++ + PD +T+ TLIKG C + +++ ++ ++ +G +
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y LI GL + G+ A E+ + + G+ P+++ YNT++D LCK+ + A +
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ + + P + TY+ +I G C G+++ L + LK + PDV Y ++ +
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G EA + M + G P+ YN+L+ + + ++ M G D +
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Query: 341 YNIIINGLCKIKMADEALNLLA 362
++ N L ++ L++L+
Sbjct: 609 IGLVTNMLHDGRLDKSFLDMLS 630
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 134/257 (52%)
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+++ A ++ ++K P I F+ L+ + K + + + G N +Y
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
LIN C+ + AL +L ++ G +P++V +++++ C K +S A L +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G PN VT++ LI+G + + +A+ L+D M K PD+ TY ++V+ L K G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
N+L M + ++P V+ YN+++DG C ++ A ++F M +G P+V +Y+ +I+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 348 LCKIKMADEALNLLAEM 364
LC +A LL++M
Sbjct: 301 LCNYGRWSDASRLLSDM 317
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 208/359 (57%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ F M++ P I EFNK+L+++ K + ISL QM+ GI L T +I I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPD--------------------------------- 127
NC+C Q++ A +VLA ++K GY+PD
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 128 --TITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
T TFTTLI GL LH K A+ D ++ +G + V+YGT++NGLCK G+ AL L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L++++ I+ DVV+YNTIID LCK K + A +L++EM KGI P+V TYS+LI C
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ A LL +M + I+P+V T++ L+DA KEGK+ EA+ + MIK+ + PD+ T
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y+SL++G+C+ + +++A+ +F M + P+V +Y+ +I G CK K +E + L EM
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 176/323 (54%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+S +M + + +N ++ L K KH A++L +M+ GI+P + T + LI+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C C+ G+ + A +L+ +++R P+ +TF+ LI GK+ A + +D+++ +
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +Y +LING C A + + + P+VV Y+T+I CK K V +L+
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM +G+ N VTY+ LI+GF A + +M + P++ TY IL+D L K
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GK+ +A + + + ++PD+ TYN +++G C +V ++F +S +G +P+V +Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
N +I+G C+ +EA +LL +M
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKM 564
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 171/324 (52%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA++ F M P +F ++ +++ L +S A L M I P++VT + LI
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + G++ A + ++KR PD T+++LI G C+H ++ A + ++++
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y TLI G CK +EL R + RG+ + V Y T+I + + +A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ +MV+ G+ PN++TY+ L+ G C G+L +A+ + + + ++PD+YTY I+++ + K
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GKV + + + +GV P+V+ YN+++ G+C +A + M + G P+ +
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YN +I + + + L+ EM
Sbjct: 576 YNTLIRARLRDGDREASAELIKEM 599
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 172/359 (47%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA++ ++M++M P F F ++ L S A++L QM G +P LVT ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G I+ A S+L + K + D + + T+I GLC + + AL ++ +G
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +Y +LI+ LC G S A LL + R I P+VV ++ +ID+ K+ + A L
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 221 YSEMVAKGISP-----------------------------------NVVTYSALIYGFCI 245
Y EM+ + I P NVVTYS LI GFC
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
++++ + L EM + + + TYT L+ + A+ + M+ GV P+++T
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN L+DG C ++ KA VF + + PD+++YNI+I G+CK ++ L +
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 160/322 (49%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + M++ P + F+ ++ + VK A L +M I P + T + LI
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N +C +++ A + ++ + P+ +T++TLIKG C +++ ++ ++ +G +
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y TLI+G + + A + +++ G+ P+++ YN ++D LCK+ ++ A +
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ + + P++ TY+ +I G C G+++ L + LK + P+V Y ++ +
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G EA ++L M + G P+ TYN+L+ + + ++ M G D +
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Query: 341 YNIIINGLCKIKMADEALNLLA 362
++ N L ++ L++L+
Sbjct: 611 IGLVTNMLHDGRLDKSFLDMLS 632
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 138/267 (51%)
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
IL N + +++ A + ++K P + F L+ + K + + + +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + +Y IN C+ + S AL +L ++ G +PD+V +++++ C K +S A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L +MV G P+ T++ LI+G + + +A+ L+D+M + PD+ TY +V+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L K G + A ++L M K ++ DVV YN+++DG C ++ A ++F M +G PD
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
V +Y+ +I+ LC +A LL++M
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDM 319
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 207/359 (57%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F M++ P I EF+K+L+++ K K + IS +ME G+ +L T NI+I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 101 NCYCHLGQINSAFSVLAGILK-----------------------------------RGYQ 125
NC C Q++ A ++L ++K GYQ
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
PDT+TFTTL+ GL H K A+ + ++ +G + V+YG +INGLCK GE AL L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L +++ I+ DVV+Y+T+IDSLCK + V A +L++EM KGI P+V TYS+LI C
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ A LL +M + I+P+V T+ L+DA KEGK+ EA+ + MI++ + P++VT
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YNSL++G+C+ + +++AQ +F M + PDV +YN +ING CK K + + L +M
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 178/326 (54%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P A++ N+M + + ++ V+ SL K +H A++L +M+ GI+P + T +
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
LI+C C+ G+ + A +L+ +L+R P+ +TF +LI GK+ A + D+++ +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
N V+Y +LING C A ++ + + PDVV YNT+I+ CK K V
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+L+ +M +G+ N VTY+ LI+GF A + +M + P++ TY L+D L
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
K GK+ +A + + K ++PD+ TYN + +G C +V D+F ++S +G PDV
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
+YN +I+G CK + +EA L +M
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKM 546
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 175/324 (54%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA++ F M P +F ++ +++ L +S A L M I P++VT N LI
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + G++ A + +++R P+ +T+ +LI G C+H ++ A Q ++++ L
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y TLING CK + +EL R + RG+ + V Y T+I + +A +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ +MV+ G+ PN++TY+ L+ G C G+L++A+ + + + ++PD+YTY I+ + + K
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GKV + ++ + +GVKPDV+ YN+++ G+C +A +F M + G PD +
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YN +I + + L+ EM
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEM 581
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 174/318 (54%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ ++M++M P F ++ L + S A++L +M G +P LVT +I
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G+ + A ++L + K + D + ++T+I LC + + AL ++ +G
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +Y +LI+ LC G S A LL + R I P+VV +N++ID+ K+ + A L
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM+ + I PN+VTY++LI GFC+ +L +A + M K+ PDV TY L++ K
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
KV + + M ++G+ + VTY +L+ G+ ++ + AQ VF M G P++ +
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 341 YNIIINGLCKIKMADEAL 358
YN +++GLCK ++A+
Sbjct: 453 YNTLLDGLCKNGKLEKAM 470
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 149/308 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + ML+ P + FN ++ + K A L +M I P++VT N LI
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N +C +++ A + ++ + PD +T+ TLI G C K+ ++ D+ +G +
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y TLI+G + + A + +++ G+ P+++ YNT++D LCK+ + A +
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ + + P++ TY+ + G C G+++ L + LK + PDV Y ++ K
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G EA + M + G PD TYN+L+ + + + ++ M D +
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592
Query: 341 YNIIINGL 348
Y ++ + L
Sbjct: 593 YGLVTDML 600
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 141/279 (50%), Gaps = 1/279 (0%)
Query: 86 FTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQ 145
F+G+ + N HL +++ A + ++K P + F+ L+ + K
Sbjct: 24 FSGLSYDGYREKLSRNALLHL-KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD 82
Query: 146 RALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
+ F + + G N +Y +IN LC+ + S AL +L ++ G P +V N+++
Sbjct: 83 LVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL 142
Query: 206 DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
+ C +S A L +MV G P+ VT++ L++G + +A+ L++ M +K
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
PD+ TY +++ L K G+ A N+L M K ++ DVV Y++++D C V+ A ++
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 326 FNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
F M +G PDV +Y+ +I+ LC +A LL++M
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F +M+ P I +N +L L K A+ + ++ + ++P + T NI+ C
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G++ + + + +G +PD I + T+I G C G + A + G L + +
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
Y TLI + G+ +A+ EL++ ++ D Y + D L +L
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 605
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 210/359 (58%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA++ F M++ P I EF+K+L+++ K + ISL QM+ GI +L T +ILI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 101 NCYCHLGQINSAFSVLAGILK-----------------------------------RGYQ 125
NC+C Q++ A +VLA ++K GYQ
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
PD+ TF TLI GL H + A+ D ++ +G + V+YG ++NGLCK G+ AL L
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L++++ I+P VV+YNTIID+LC K V+ A +L++EM KGI PNVVTY++LI C
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ A LL +M + I+P+V T++ L+DA KEGK+ EA+ + MIK+ + PD+ T
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y+SL++G+C+ + +++A+ +F M + P+V +YN +I G CK K DE + L EM
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Score = 194 bits (493), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 177/323 (54%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+S +M Q P + +N ++ +L K+ + A++L +M+ GI+P++VT N LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C C+ G+ + A +L+ +++R P+ +TF+ LI GK+ A + +D+++ +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +Y +LING C A + + + P+VV YNT+I CK K V +L+
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM +G+ N VTY+ LI+GF + A + +M + PD+ TY+IL+D L
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GKV A + + + ++PD+ TYN +++G C +V D+F ++S +G P+V +Y
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
+++G C+ + +EA L EM
Sbjct: 540 TTMMSGFCRKGLKEEADALFREM 562
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 171/318 (53%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+S +M++M P F FN ++ L + S A++L +M G +P LVT I++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G I+ A S+L + + +P + + T+I LC + + AL ++ +G
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y +LI LC G S A LL + R I P+VV ++ +ID+ K+ + A L
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y EM+ + I P++ TYS+LI GFC+ +L +A + + M K+ P+V TY L+ K
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+V E + M ++G+ + VTY +L+ G+ E + AQ VF M G PD+ +
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 341 YNIIINGLCKIKMADEAL 358
Y+I+++GLC + AL
Sbjct: 469 YSILLDGLCNNGKVETAL 486
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 133/257 (51%)
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+++ A ++ ++K P + F+ L+ + K + + + G N +Y
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
LIN C+ + S AL +L ++ G +PD+V N++++ C +S A L +MV
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G P+ T++ LI+G + +A+ L+D M +K PD+ TY I+V+ L K G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
++L M + ++P VV YN+++D C VN A ++F M +G P+V +YN +I
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 348 LCKIKMADEALNLLAEM 364
LC +A LL++M
Sbjct: 301 LCNYGRWSDASRLLSDM 317
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 156/322 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + M++ P + F+ ++ + VK A L +M I P + T + LI
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N +C +++ A + ++ + P+ +T+ TLIKG C ++ ++ ++ +G +
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y TLI+G + E A + +++ G+ PD++ Y+ ++D LC + V A +
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ + + P++ TY+ +I G C G+++ L + LK + P+V TYT ++ +
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G EA + M ++G PD TYN+L+ + + + ++ M D +
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Query: 341 YNIIINGLCKIKMADEALNLLA 362
++ N L ++ L +L+
Sbjct: 609 IGLVTNMLHDGRLDKSFLKMLS 630
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 257 bits (657), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 207/359 (57%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ F M+Q P I EFNK+L+++ K + ISL +M+ I L + NILI
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPD--------------------------------- 127
NC+C Q+ A +VL ++K GY+PD
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 128 --TITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
T+TF TLI GL LH K A+ D ++A+G + +YGT++NGLCK G+ AL L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L++++ I+ DVV+Y TIID+LC K V+ A +L++EM KGI PNVVTY++LI C
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ A LL +M + I+P+V T++ L+DA KEGK+ EA+ + MIK+ + PD+ T
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y+SL++G+C+ + +++A+ +F M + P+V +YN +I G CK K +E + L EM
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 174/323 (53%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+S +M + + + ++ +L K+ + A++L +M+ GI+P++VT N LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C C+ G+ + A +L+ +++R P+ +TF+ LI GK+ A + +D+++ +
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +Y +LING C A + + + P+VV YNT+I CK K V +L+
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM +G+ N VTY+ LI G G A + +M + PD+ TY+IL+D L K
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GK+ +A + + K ++PD+ TYN +++G C +V D+F ++S +G P+V Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
+I+G C+ + +EA L EM
Sbjct: 539 TTMISGFCRKGLKEEADALFREM 561
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 177/329 (53%), Gaps = 4/329 (1%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N DA++ F M P + +N ++ L +S A L M I P++VT +
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI+ + G++ A + ++KR PD T+++LI G C+H ++ A + ++++
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
N V+Y TLI G CK +EL R + RG+ + V YNT+I L + A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
++ +MV+ G+ P+++TYS L+ G C G+L++A+ + + + ++PD+YTY I+++
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
+ K GKV + ++ + +GVKP+V+ Y +++ G+C +A +F M + G P+
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 338 VHSYNIIINGLCKIKMADEALN--LLAEM 364
+YN +I +++ D+A + L+ EM
Sbjct: 570 SGTYNTLIRA--RLRDGDKAASAELIKEM 596
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 169/318 (53%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ ++M M P FN ++ L S A++L +M G +P L T ++
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G I+ A S+L + K + D + +TT+I LC + + AL ++ +G
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y +LI LC G S A LL + R I P+VV ++ +ID+ K+ + A L
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y EM+ + I P++ TYS+LI GFC+ +L +A + + M K+ P+V TY L+ K
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+V E + M ++G+ + VTYN+L+ G + + AQ +F M G PD+ +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 341 YNIIINGLCKIKMADEAL 358
Y+I+++GLCK ++AL
Sbjct: 468 YSILLDGLCKYGKLEKAL 485
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 171/324 (52%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ +RM+ P +F + V+ L K A+SL +ME I+ +V +I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C+ +N A ++ + +G +P+ +T+ +LI+ LC +G+ A + D++ +
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V++ LI+ K G+ A +L + R I PD+ Y+++I+ C + A +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ M++K PNVVTY+ LI GFC ++++ + L EM + + + TY L+ L +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G A+ + M+ GV PD++TY+ L+DG C ++ KA VF + + PD+++
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YNI+I G+CK ++ +L +
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSL 526
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 159/322 (49%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + M++ P + F+ ++ + VK A L +M I P + T + LI
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N +C +++ A + ++ + P+ +T+ TLIKG C +++ ++ ++ +G +
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y TLI GL + G+ A ++ +++ G+ PD++ Y+ ++D LCK + A +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ + + P++ TY+ +I G C G+++ L + LK + P+V YT ++ +
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G EA + M + G P+ TYN+L+ + + ++ M G D +
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Query: 341 YNIIINGLCKIKMADEALNLLA 362
+++IN L ++ L +L+
Sbjct: 608 ISMVINMLHDGRLEKSYLEMLS 629
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 149/317 (47%), Gaps = 22/317 (6%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
R Q+ P+F V Y +A S ++ + ++ N+L++
Sbjct: 22 RFAQLRKASPLFSLRGV---------YFSAASYDYREK--------LSRNVLLDL----- 59
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+++ A + +++ P + F L+ + K + + + + SY
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
LIN C+ + AL +L ++ G +PD+V +++++ C K +S A L +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
PN VT++ LI+G + + +A+ L+D M + PD++TY +V+ L K G + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
++L M K ++ DVV Y +++D C VN A ++F M +G P+V +YN +I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 348 LCKIKMADEALNLLAEM 364
LC +A LL++M
Sbjct: 300 LCNYGRWSDASRLLSDM 316
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 210/359 (58%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI F M Q P I EF+K+L+++ K + IS +ME GI +L T NILI
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 101 NCYC-----------------------------------HLGQINSAFSVLAGILKRGYQ 125
NC+C H +I+ A +++ +++ GY+
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
PDT+TFTTLI GL LH K A+ D ++ +G + V+YG ++NGLCK G+T AL L
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L +++ I+ +VV+Y+T+IDSLCK + A +L++EM KG+ PNV+TYS+LI C
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ A LL +M + I+P++ T++ L+DA K+GK+ +A+ + MIK+ + P++ T
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y+SL++G+C+++ + +A+ + M ++ P+V +YN +ING CK K D+ + L EM
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 157/276 (56%), Gaps = 6/276 (2%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A++ N+M + ++ V+ SL K +H A++L +ME G++P+++T + LI+
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C C+ G+ + A +L+ +++R P+ +TF+ LI GK+ +A + +++++ +
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 162 NQVSYGTLINGLC---KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
N +Y +LING C +LGE LEL+ R + P+VV YNT+I+ CK K V
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIR---KDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+L+ EM +G+ N VTY+ LI+GF A + +M + P++ TY IL+D L
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC 314
K GK+ +A + + + ++PD+ TYN +++G C
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 133/245 (54%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA++ F M P + ++ +++ L +S A L M I P+LVT + LI
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + G++ A + ++KR P+ T+++LI G C+ ++ A Q + ++ + L
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y TLING CK +EL R + RG+ + V Y T+I + + +A +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ +MV+ G+ PN++TY+ L+ G C G+L +A+ + + + ++PD+YTY I+++ + K
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 281 EGKVR 285
GK +
Sbjct: 511 AGKWK 515
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 64/139 (46%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G+A M++ P + +N ++ K K + L +M G+ + VT L
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ + ++A V ++ G P+ +T+ L+ GLC +GK+ +A+ + +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 160 LLNQVSYGTLINGLCKLGE 178
+ +Y +I G+CK G+
Sbjct: 495 EPDIYTYNIMIEGMCKAGK 513
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 244 bits (622), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 191/324 (58%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI F+ M++ P I +FN++L+++VK K Y ISL +ME GI+ L T NI+I
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
NC+C Q++ A S+L +LK GY+PD +T +L+ G C ++ A+ D ++ G+
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y +I+ LCK + A + + I+ +GI+P+VV Y +++ LC S A L
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
S+M+ K I+PNV+TYSAL+ F G++ +A L +EM +IDPD+ TY+ L++ L
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
++ EA M +M+ +G DVV+YN+L++G+C V +F MSQRG + +
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YN +I G + D+A ++M
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 176/328 (53%), Gaps = 35/328 (10%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+S ++M+++ P I +N ++ SL KTK + A ++E GI+P++VT L+
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 101 NCYCHLGQINSAFSVLAGILKR-----------------------------------GYQ 125
N C+ + + A +L+ ++K+
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
PD +T+++LI GLCLH +I A Q D ++++G L + VSY TLING CK ++L
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
R + RG+ + V YNT+I + V A + +S+M GISP++ TY+ L+ G C
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+L++A+ + ++M + +D D+ TYT ++ + K GKV EA ++ + +G+KPD+VT
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
Y ++M G C +++ + ++ M Q G
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 163/323 (50%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+S +ML++ P ++ + S A+SL +M G KP +V N +I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C ++N AF I ++G +P+ +T+T L+ GLC + A + D++ +
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N ++Y L++ K G+ A EL + I PD+V Y+++I+ LC + A ++
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
MV+KG +VV+Y+ LI GFC +++ + L EM + + + TY L+ +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
G V +A+ + M G+ PD+ TYN L+ G C E+ KA +F M +R D+ +Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
+I G+CK +EA +L +
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSL 461
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
++N A + + ++K P + F L+ + K + + G + ++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
+IN C + S AL +L ++ G +PD V ++++ C+ VS A L +MV
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G P++V Y+A+I C ++ A E+ K I P+V TYT LV+ L + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMD-----------------------------------G 312
+L+ MIK+ + P+V+TY++L+D G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 313 YCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
CL + +++A +F+ M +G DV SYN +ING CK K ++ + L EM
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%)
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
+D ++ A DL+S+MV P++V ++ L+ + + I L +M + I D+Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
T+ I+++ +V A ++L M+K G +PD VT SL++G+C N V+ A + + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ G PD+ +YN II+ LCK K ++A + E+
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 244 bits (622), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 191/327 (58%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N + I F +M+Q P I +F+KVL+ + K+K+Y ISL H ME GI L + N
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
I+INC C + A SV+ ++K GY+PD +T ++LI G C ++ A+ +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
GF + V Y T+I+G CK+G + A+EL R++ G++ D V YN+++ LC S A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L +MV + I PNV+T++A+I F G+ +A+ L +EM + +DPDV+TY L++
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L G+V EAK ML +M+ +G PDVVTYN+L++G+C V++ +F M+QRG D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+YN II G + D A + + M
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 159/296 (53%), Gaps = 3/296 (1%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ F+RM + +N ++ L + +S A L M I P+++T +I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + G+ + A + + +R PD T+ +LI GLC+HG++ A Q D ++ +G L
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y TLING CK +L R + RG+ D + YNTII + A ++
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+S M ++ PN+ TYS L+YG C+ ++++A+ L + M I+ D+ TY I++ + K
Sbjct: 372 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
G V +A ++ + +G+KPDVV+Y +++ G+C + +K+ ++ M + G P
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 169/324 (52%), Gaps = 3/324 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI ++M +M P + +N ++ K + A+ L +ME G++ VT N L+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C G+ + A ++ ++ R P+ ITFT +I GK A++ ++++ +
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +Y +LINGLC G A ++L + +G PDVV YNT+I+ CK K V L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM +G+ + +TY+ +I G+ G+ A + M + P++ TY+IL+ L
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 393
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+V +A + M K ++ D+ TYN ++ G C + V A D+F ++S +G PDV S
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y +I+G C+ + D++ L +M
Sbjct: 454 YTTMISGFCRKRQWDKSDLLYRKM 477
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/360 (37%), Positives = 201/360 (55%), Gaps = 36/360 (10%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIK---------- 90
DAI F M++ P I EF+K+L+++ K + ISL QM+ GI
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 91 -------------------------PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQ 125
PS+VT+N L+N +CH +I+ A +++ +++ GYQ
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
PDT+TFTTL+ GL H K A+ + ++ +G + V+YG +INGLCK GE AL L
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L +++ I+ DVV+YNTIID LCK K + AFDL+++M KGI P+V TY+ LI C
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK-QGVKPDVV 304
G+ A LL +M KNI+PD+ + L+DA KEGK+ EA+ + M+K + PDVV
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN+L+ G+C V + +VF MSQRG + +Y +I+G + + D A + +M
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 181/329 (55%), Gaps = 5/329 (1%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P A++ N+M + + +N ++ L K KH A L ++ME GIKP + T N
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDD-VLAQ 157
LI+C C+ G+ + A +L+ +L++ PD + F LI GK+ A + +D+ V ++
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ V+Y TLI G CK +E+ R + RG+ + V Y T+I + + +A
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
++ +MV+ G+ P+++TY+ L+ G C G ++ A+ + + M +++ D+ TYT +++A
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L K GKV + ++ + +GVKP+VVTY ++M G+C +A +F M + G P+
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPN 530
Query: 338 VHSYNIIINGLCKIKMADEALN--LLAEM 364
+YN +I +++ DEA + L+ EM
Sbjct: 531 SGTYNTLIRA--RLRDGDEAASAELIKEM 557
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 132/257 (51%)
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+++ A + ++K P + F+ L+ + K + + + G N +Y
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
IN C+ + S AL +L ++ G P +V N++++ C +S A L +MV
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G P+ VT++ L++G + +A+ L++ M +K PD+ TY +++ L K G+ A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
N+L M K ++ DVV YN+++DG C ++ A D+FN M +G PDV +YN +I+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 348 LCKIKMADEALNLLAEM 364
LC +A LL++M
Sbjct: 295 LCNYGRWSDASRLLSDM 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 83/155 (53%)
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
+D + A L+ +MV P++V +S L+ + + I L ++M I ++Y
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
TY+I ++ + ++ A +L M+K G P +VT NSL++G+C N +++A + + M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ G PD ++ +++GL + A EA+ L+ M
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 201/374 (53%), Gaps = 54/374 (14%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI F+ M++ + NKV+ V+ AISL +ME I ++ + NILI
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C+C +++ + S + K G+QPD +TF TL+ GLCL +I AL ++ GFL
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 161 --------------------------------------------------LNQVSYGTLI 170
++ V+YGT++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 171 NGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS 230
NG+CK+G+T +AL LL +++ IKPDVV+Y+ IID LCKD S A L+SEM+ KGI+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 231 PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNM 290
PNV TY+ +I GFC G+ A LL +M + I+PDV T+ L+ A KEGK+ EA+ +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 291 LAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
M+ + + PD VTYNS++ G+C N + A+ +F+ M+ +PDV ++N II+ C+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCR 444
Query: 351 IKMADEALNLLAEM 364
K DE + LL E+
Sbjct: 445 AKRVDEGMQLLREI 458
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 180/359 (50%), Gaps = 34/359 (9%)
Query: 40 GDAISHFNRMLQMPST---PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTM 96
GD S N + +M T P + ++ ++ L K H+S A L +M GI P++ T
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
N +I+ +C G+ + A +L +++R PD +TF LI GK+ A + D++L
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAA-------------------------------LEL 185
+ + V+Y ++I G CK A ++L
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
LR I RG+ + YNT+I C+ ++ A DL+ EM++ G+ P+ +T + L+YGFC
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
+L++A+ L + + + ID D Y I++ + K KV EA ++ + GV+PDV T
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN ++ G+C + ++ A +F+ M G PD +YN +I G K D+++ L++EM
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 155/321 (48%), Gaps = 12/321 (3%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA M++ P + FN ++++ VK A L +M I P VT N +I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 101 NCYCHLGQINSA---FSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+C + + A F ++A PD +TF T+I C ++ +Q ++ +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMA-------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + N +Y TLI+G C++ +AA +L + + G+ PD + N ++ C+++ + A
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+L+ + I + V Y+ +I+G C ++ +A L + + ++PDV TY +++
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
+ + +A + M G +PD TYN+L+ G E++K+ ++ + M G + D
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Query: 338 VHSYNIIINGLCKIKMADEAL 358
+ + +C++ +DE +
Sbjct: 642 AFTIKMAEEIICRV--SDEEI 660
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 5/295 (1%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
+ ML P +N ++ K + A H + P +VT N +I+ YC
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA---KHMFDLMA-SPDVVTFNTIIDVYCRA 445
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
+++ +L I +RG +T T+ TLI G C + A ++++ G + ++
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
L+ G C+ + ALEL IQ I D V YN II +CK V A+DL+ +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
G+ P+V TY+ +I GFC + A L +M +PD TY L+ K G++ +
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
+ +++ M G D T + C V++ ++ GET + Y
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRP-KINGETSSIPRY 679
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTY 271
K + A D + MV V + +I F + + AI L +M ++ I ++Y++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN----------- 320
IL+ K+ + + + K G +PDVVT+N+L+ G CL + ++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 321 ----KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+A +F+ M + G TP V ++N +INGLC EA L+ +M
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM 252
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 201/374 (53%), Gaps = 54/374 (14%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI F+ M++ + NKV+ V+ AISL +ME I ++ + NILI
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C+C +++ + S + K G+QPD +TF TL+ GLCL +I AL ++ GFL
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 161 --------------------------------------------------LNQVSYGTLI 170
++ V+YGT++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 171 NGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS 230
NG+CK+G+T +AL LL +++ IKPDVV+Y+ IID LCKD S A L+SEM+ KGI+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 231 PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNM 290
PNV TY+ +I GFC G+ A LL +M + I+PDV T+ L+ A KEGK+ EA+ +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 291 LAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
M+ + + PD VTYNS++ G+C N + A+ +F+ M+ +PDV ++N II+ C+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCR 444
Query: 351 IKMADEALNLLAEM 364
K DE + LL E+
Sbjct: 445 AKRVDEGMQLLREI 458
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 180/359 (50%), Gaps = 34/359 (9%)
Query: 40 GDAISHFNRMLQMPST---PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTM 96
GD S N + +M T P + ++ ++ L K H+S A L +M GI P++ T
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
N +I+ +C G+ + A +L +++R PD +TF LI GK+ A + D++L
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAA-------------------------------LEL 185
+ + V+Y ++I G CK A ++L
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
LR I RG+ + YNT+I C+ ++ A DL+ EM++ G+ P+ +T + L+YGFC
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
+L++A+ L + + + ID D Y I++ + K KV EA ++ + GV+PDV T
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN ++ G+C + ++ A +F+ M G PD +YN +I G K D+++ L++EM
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 149/309 (48%), Gaps = 10/309 (3%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA M++ P + FN ++++ VK A L +M I P VT N +I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 101 NCYCHLGQINSA---FSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+C + + A F ++A PD +TF T+I C ++ +Q ++ +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMA-------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + N +Y TLI+G C++ +AA +L + + G+ PD + N ++ C+++ + A
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+L+ + I + V Y+ +I+G C ++ +A L + + ++PDV TY +++
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
+ + +A + M G +PD TYN+L+ G E++K+ ++ + M G + D
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Query: 338 VHSYNIIIN 346
+ ++ +
Sbjct: 642 AFTIKMVAD 650
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTY 271
K + A D + MV V + +I F + + AI L +M ++ I ++Y++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN----------- 320
IL+ K+ + + + K G +PDVVT+N+L+ G CL + ++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 321 ----KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+A +F+ M + G TP V ++N +INGLC EA L+ +M
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM 252
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 71/177 (40%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M+ P N +L + + A+ L ++ + I V NI+I+ C
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
+++ A+ + + G +PD T+ +I G C I A + G + +
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYS 222
Y TLI G K GE ++EL+ ++ G D + D + +L D+ S
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDMLS 666
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 228 bits (582), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 194/359 (54%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D++ F M+Q P I +F+++L+++ K K Y I L QM+ GI +L T NIL+
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
NC+C Q++ A S L ++K G++P +TF +L+ G C ++ AL D ++ G+
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC----------- 209
N V Y T+I+GLCK + AL+LL R++ GI PDVV YN++I LC
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 210 ------------------------KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
K+ VS A + Y EM+ + + P++VTYS LIYG C+
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
+L +A + M K PDV TY+IL++ K KV + M ++GV + VT
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y L+ GYC ++N A+++F M G P++ +YN++++GLC ++AL +LA+M
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 176/324 (54%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ F++M+ M P + +N ++ L K+K A+ L ++ME GI P +VT N LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C G+ + A +++ + KR PD TF LI G++ A +F+++++ +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y LI GLC A E+ + +G PDVV Y+ +I+ CK K V H L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM +G+ N VTY+ LI G+C G+L A + M + P++ TY +L+ L
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GK+ +A +LA M K G+ D+VTYN ++ G C EV A D++ +++ +G PD+ +
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y ++ GL K + EA L +M
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKM 492
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F RM+ P I +N +L L A+ + M+ G+ +VT NI+I C
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ 163
G++ A+ + + +G PD T+TT++ GL G + A + G L N+
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 224 bits (572), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 184/324 (56%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + F M+ P I +F ++LT+ + Y T I S +ME GI L + ILI
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+C+C +++ A SVL ++K GY+P +TF +L+ G CL +I A ++ G+
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V Y TLI+GLCK GE + ALELL ++ +G+ DVV YNT++ LC S A +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+M+ + I+P+VVT++ALI F G L +A L EM ++DP+ TY +++ L
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G++ +AK +M +G P+VVTYN+L+ G+C V++ +F MS G D+ +
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YN +I+G C++ AL++ M
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWM 377
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 167/325 (51%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
GDA S M++ P + +N ++ L K + A+ L ++ME G+ +VT N L
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ C+ G+ + A +L ++KR PD +TFT LI G + A + + +++
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N V+Y ++INGLC G A + + +G P+VV YNT+I CK ++V
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
L+ M +G + ++ TY+ LI+G+C VG+L+ A+ + M + + PD+ T+ IL+ L
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
G++ A M + +V YN ++ G C ++V KA ++F + G PD
Sbjct: 398 VNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
+Y I+I GLCK EA L+ M
Sbjct: 458 TYTIMILGLCKNGPRREADELIRRM 482
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 127/259 (49%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA M++ P + F ++ VK + A L +M + + P+ VT N +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G++ A + +G P+ +T+ TLI G C + ++ + +GF
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +Y TLI+G C++G+ AL++ + R + PD++ + ++ LC + + A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ +M +V Y+ +I+G C ++++A L + ++ + PD TYTI++ L K
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 281 EGKVREAKNMLAVMIKQGV 299
G REA ++ M ++G+
Sbjct: 469 NGPRREADELIRRMKEEGI 487
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N +A + M+Q P +N ++ L A M G P++VT N
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI+ +C ++ + + G+ D T+ TLI G C GK++ AL ++++
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ +++ L++GLC GE +AL ++ +V YN +I LCK V A
Sbjct: 381 RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKA 440
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNI 264
++L+ + +G+ P+ TY+ +I G C G ++A L+ M + I
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 181/325 (55%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G A+ + M TP + +N ++ + K AI + M +G +P+++T NI+
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ C G+ A +LA +L++G+ P +TF LI LC G + RA+ + + G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N +SY L++G CK + A+E L R+ RG PD+V YNT++ +LCKD V A +
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ +++ +KG SP ++TY+ +I G G+ +AI LLDEM K++ PD TY+ LV L
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
+EGKV EA + G++P+ VT+NS+M G C + ++A D M RG P+
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
SY I+I GL MA EAL LL E+
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNEL 580
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 160/305 (52%), Gaps = 3/305 (0%)
Query: 60 EFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
E N L +V+T M + G P ++ LI +C LG+ A +L +
Sbjct: 104 ESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL 163
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
G PD IT+ +I G C G+I AL D + + V+Y T++ LC G+
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTILRSLCDSGKL 220
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A+E+L R+ R PDV+ Y +I++ C+D V HA L EM +G +P+VVTY+ L
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
+ G C G+L +AI L++M P+V T+ I++ ++ G+ +A+ +LA M+++G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
P VVT+N L++ C + +A D+ M Q G P+ SYN +++G CK K D A+
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 360 LLAEM 364
L M
Sbjct: 401 YLERM 405
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 175/323 (54%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ +RMLQ P + + ++ + + A+ L +M G P +VT N+L+N
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C G+++ A L + G QP+ IT +++ +C G+ A + D+L +GF
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ V++ LIN LC+ G A+++L ++ G +P+ + YN ++ CK+K + A +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
MV++G P++VTY+ ++ C G+++ A+ +L+++ K P + TY ++D L K
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GK +A +L M + +KPD +TY+SL+ G +V++A F+ + G P+ ++
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
N I+ GLCK + D A++ L M
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFM 545
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 169/311 (54%), Gaps = 3/311 (0%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
+ P + +N +++ K + A+S+ +M + P +VT N ++ C G++ A
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
VL +L+R PD IT+T LI+ C + A++ D++ +G + V+Y L+NG+
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
CK G A++ L + G +P+V+ +N I+ S+C A L ++M+ KG SP+V
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
VT++ LI C G L +AI +L++M P+ +Y L+ KE K+ A L
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
M+ +G PD+VTYN+++ C +V A ++ N +S +G +P + +YN +I+GL K
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 354 ADEALNLLAEM 364
+A+ LL EM
Sbjct: 465 TGKAIKLLDEM 475
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 174/324 (53%), Gaps = 3/324 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+ M+ + P I ++ + A + +E +G P ++T N++I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ YC G+IN+A SVL + PD +T+ T+++ LC GK+++A++ D +L +
Sbjct: 180 SGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ ++Y LI C+ A++LL ++ RG PDVV YN +++ +CK+ + A
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
++M + G PNV+T++ ++ C G+ A LL +M K P V T+ IL++ L +
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G + A ++L M + G +P+ ++YN L+ G+C ++++A + M RG PD+ +
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YN ++ LCK ++A+ +L ++
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQL 440
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 169/323 (52%), Gaps = 3/323 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+S +RM +P + +N +L SL + A+ + +M P ++T ILI
Sbjct: 190 NALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C + A +L + RG PD +T+ L+ G+C G++ A++F +D+ + G
Sbjct: 247 EATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N +++ ++ +C G A +LL + +G P VV +N +I+ LC+ L+ A D+
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+M G PN ++Y+ L++GFC ++ +AI L+ M + PD+ TY ++ AL K
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+GKV +A +L + +G P ++TYN+++DG + KA + + M + PD +
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 341 YNIIINGLCKIKMADEALNLLAE 363
Y+ ++ GL + DEA+ E
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHE 509
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 151/293 (51%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+AI N M P + N +L S+ T + A L M G PS+VT NILI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G + A +L + + G QP+++++ L+ G C K+ RA+++ + ++++G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y T++ LCK G+ A+E+L ++ +G P ++ YNT+ID L K A L
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
EM AK + P+ +TYS+L+ G G++ +AI E I P+ T+ ++ L K
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
+ A + L MI +G KP+ +Y L++G +A ++ N + +G
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
H + F L V + + + GE + L + G PD++ T+I C+
Sbjct: 90 HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
A + + G P+V+TY+ +I G+C G++ A+ +LD M ++ PDV T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVT 206
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
Y ++ +L GK+++A +L M+++ PDV+TY L++ C + V A + + M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 331 QRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
RG TPDV +YN+++NG+CK DEA+ L +M
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G AI + M P ++ ++ L + AI H+ E GI+P+ VT N +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ C Q + A L ++ RG +P+ ++T LI+GL G + AL+ +++ +G
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Query: 160 L 160
+
Sbjct: 586 M 586
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 164/246 (66%), Gaps = 4/246 (1%)
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
+++ G +PD +TFTTL+ GLC G++ +AL D ++ +G YGT+INGLCK+G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGD 56
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
T +AL LL +++ IK VV+YN IID LCKD HA +L++EM KGI P+V+TYS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 239 LIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG 298
+I FC G+ A LL +M + I+PDV T++ L++AL KEGKV EA+ + M+++G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 299 VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
+ P +TYNS++DG+C + +N A+ + ++M+ + +PDV +++ +ING CK K D +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 359 NLLAEM 364
+ EM
Sbjct: 237 EIFCEM 242
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 163/316 (51%), Gaps = 4/316 (1%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
M++ P + F ++ L A++L +M G +P +IN C +G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
SA ++L+ + + + + + +I LC G A ++ +G + ++Y
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
+I+ C+ G + A +LLR + R I PDVV ++ +I++L K+ VS A ++Y +M+ +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
I P +TY+++I GFC +L A +LD M K+ PDV T++ L++ K +V
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+ M ++G+ + VTY +L+ G+C V +++ AQD+ N M G P+ ++ ++ L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 349 CKIKMADEALNLLAEM 364
C K +A +L ++
Sbjct: 297 CSKKELRKAFAILEDL 312
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 136/251 (54%), Gaps = 3/251 (1%)
Query: 40 GDAISHFNRMLQMPST---PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTM 96
GD S N + +M T + +N ++ L K H+ A +L +M GI P ++T
Sbjct: 55 GDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY 114
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
+ +I+ +C G+ A +L +++R PD +TF+ LI L GK+ A + + D+L
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+G ++Y ++I+G CK + A +L + + PDVV ++T+I+ CK K V +
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
+++ EM +GI N VTY+ LI+GFC VG L A LL+ M + P+ T+ ++
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 277 ALGKEGKVREA 287
+L + ++R+A
Sbjct: 295 SLCSKKELRKA 305
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 110/214 (51%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M P + ++ ++ S ++ ++ A L M I P +VT + LIN
Sbjct: 99 FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVK 158
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G+++ A + +L+RG P TIT+ ++I G C ++ A + D + ++ + V+
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+ TLING CK +E+ + RGI + V Y T+I C+ + A DL + M+
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+ G++PN +T+ +++ C +L++A +L+++
Sbjct: 279 SSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 98/184 (53%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA M++ P + F+ ++ +LVK S A + M GI P+ +T N +I
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +C ++N A +L + + PD +TF+TLI G C ++ ++ ++ +G +
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y TLI+G C++G+ AA +LL + G+ P+ + + +++ SLC K + AF +
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Query: 221 YSEM 224
++
Sbjct: 309 LEDL 312
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ ML+ P +N ++ K + A + M P +VT + LIN YC
Sbjct: 169 YGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
++++ + + +RG +T+T+TTLI G C G + A + +++ G N ++
Sbjct: 229 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYIT 288
Query: 166 YGTLINGLCKLGETSAALELLRRIQ 190
+ +++ LC E A +L +Q
Sbjct: 289 FQSMLASLCSKKELRKAFAILEDLQ 313
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 217 bits (553), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 186/359 (51%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ F RM+ P I +F ++L+ + K Y ISL QM+ GI P L T NI++
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+C C Q A L ++K G++PD +TFT+L+ G C +I+ A+ D +L GF
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y TLI LCK + A+EL ++ G +P+VV YN ++ LC+ A L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+M+ + I PNV+T++ALI F VG+L +A L + M ++ PDV+TY L++ L
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 281 EGKVREAKNMLAVMIKQGVKP-----------------------------------DVVT 305
G + EA+ M +M + G P + +T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y L+ GYCLV + AQ+VFN MS R PD+ +YN++++GLC ++AL + M
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 180/324 (55%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI+ F+++L M P + + ++ L K +H + A+ L +QM G +P++VT N L+
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C +G+ A +L ++KR +P+ ITFT LI GK+ A + ++ ++
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +YG+LINGLC G A ++ ++ G P+ V+Y T+I CK K V +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM KG+ N +TY+ LI G+C+VG+ A + ++M + PD+ TY +L+D L
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GKV +A + M K+ + ++VTY ++ G C + +V A D+F ++ +G P+V +
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT 470
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y +I+G C+ + EA +L +M
Sbjct: 471 YTTMISGFCRRGLIHEADSLFKKM 494
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 129/267 (48%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
GDA M++ P + F ++ + VK A L + M + P + T L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
IN C G ++ A + + + G P+ + +TTLI G C +++ ++ ++ +G
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ N ++Y LI G C +G A E+ ++ R PD+ YN ++D LC + V A
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
++ M + + N+VTY+ +I G C +G+++ A L + K + P+V TYT ++
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTY 306
+ G + EA ++ M + G P+ Y
Sbjct: 480 RRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
P A FN+M + P I +N +L L A+ + M + ++VT
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
I+I C LG++ AF + + +G +P+ IT+TT+I G C G I A +
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 158 GFLLNQVSY 166
GFL N+ Y
Sbjct: 498 GFLPNESVY 506
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 188/317 (59%), Gaps = 4/317 (1%)
Query: 52 MPS---TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
MPS P F V+ ++ A+ + QM G S V++N++++ +C G+
Sbjct: 215 MPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274
Query: 109 INSAFSVLAGILKR-GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+ A + + + + G+ PD TF TL+ GLC G ++ A++ D +L +G+ + +Y
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
++I+GLCKLGE A+E+L ++ R P+ V YNT+I +LCK+ V A +L + +K
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
GI P+V T+++LI G C+ + A+ L +EM K +PD +TY +L+D+L +GK+ EA
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
NML M G V+TYN+L+DG+C N+ +A+++F+ M G + + +YN +I+G
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 348 LCKIKMADEALNLLAEM 364
LCK + ++A L+ +M
Sbjct: 515 LCKSRRVEDAAQLMDQM 531
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 172/311 (55%), Gaps = 3/311 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSH-QMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
P +N++L LV + +SH +M GIKP + T N+LI C Q+ A
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKL-VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+L + G PD TFTT+++G G + AL+ + ++ G + VS +++G C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 175 KLGETSAALELLRRIQGR-GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
K G AL ++ + + G PD +NT+++ LCK V HA ++ M+ +G P+V
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
TY+++I G C +G++K+A+ +LD+M ++ P+ TY L+ L KE +V EA + V
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
+ +G+ PDV T+NSL+ G CL A ++F M +G PD +YN++I+ LC
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 354 ADEALNLLAEM 364
DEALN+L +M
Sbjct: 451 LDEALNMLKQM 461
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 165/306 (53%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + FN ++ L K H AI + M G P + T N +I+ C LG++ A V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L ++ R P+T+T+ TLI LC +++ A + + ++G L + ++ +LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
A+EL ++ +G +PD YN +IDSLC + A ++ +M G + +V+T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+ LI GFC + ++A + DEM + + + TY L+D L K +V +A ++ MI
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
+G KPD TYNSL+ +C ++ KA D+ AM+ G PD+ +Y +I+GLCK +
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 356 EALNLL 361
A LL
Sbjct: 593 VASKLL 598
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 172/323 (53%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI + MLQ P ++ +N V++ L K A+ + QM P+ VT N LI+
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C Q+ A + + +G PD TF +LI+GLCL + A++ +++ ++G
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
++ +Y LI+ LC G+ AL +L++++ G V+ YNT+ID CK A +++
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM G+S N VTY+ LI G C +++ A L+D+M ++ PD YTY L+ +
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
G +++A +++ M G +PD+VTY +L+ G C V A + ++ +G H+Y
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
N +I GL + + EA+NL EM
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREM 636
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 162/329 (49%), Gaps = 8/329 (2%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ ++M+ +P +N ++++L K A L+ + GI P + T N LI
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C A + + +G +PD T+ LI LC GK+ AL + G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ ++Y TLI+G CK +T A E+ ++ G+ + V YNT+ID LCK + V A L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+M+ +G P+ TY++L+ FC G +K+A ++ M +PD+ TY L+ L K
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET-PDVH 339
G+V A +L + +G+ YN ++ G + +A ++F M ++ E PD
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 340 SYNIIINGLCK----IKMADEALNLLAEM 364
SY I+ GLC I+ EA++ L E+
Sbjct: 648 SYRIVFRGLCNGGGPIR---EAVDFLVEL 673
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 156/320 (48%), Gaps = 7/320 (2%)
Query: 48 RMLQMPSTPPIFE-----FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINC 102
R+ + S P F + ++L L ++ + + M+ + + T ILI
Sbjct: 68 RLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIES 127
Query: 103 YCHLGQINSAFSVLAGILKR-GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y + SV+ ++ G +PDT + ++ L ++ H + G
Sbjct: 128 YAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKP 187
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ ++ LI LC+ + A+ +L + G+ PD + T++ ++ + A +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN-IDPDVYTYTILVDALGK 280
+MV G S + V+ + +++GFC G+++ A+ + EM ++ PD YT+ LV+ L K
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G V+ A ++ VM+++G PDV TYNS++ G C + EV +A +V + M R +P+ +
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 341 YNIIINGLCKIKMADEALNL 360
YN +I+ LCK +EA L
Sbjct: 368 YNTLISTLCKENQVEEATEL 387
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 193 GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQA 252
G+KPD YN +++ L + +++M GI P+V T++ LI C QL+ A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 253 IGLLDEMGLKNIDPDVYTYT-----------------------------------ILVDA 277
I +L++M + PD T+T ++V
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 278 LGKEGKVREAKNMLAVMIKQ-GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
KEG+V +A N + M Q G PD T+N+L++G C V A ++ + M Q G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 337 DVHSYNIIINGLCKIKMADEALNLLAEM 364
DV++YN +I+GLCK+ EA+ +L +M
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQM 356
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 182/324 (56%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F M++ P I +F K+L + K K + I+L ++ G+ L T N+L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
NC+C Q A S L ++K G++PD +TFT+LI G CL +++ A+ + ++ G
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V Y T+I+ LCK G + AL L +++ GI+PDVVMY ++++ LC A L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
M + I P+V+T++ALI F G+ A L +EM +I P+++TYT L++
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
EG V EA+ M +M +G PDVV Y SL++G+C +V+ A +F MSQ+G T + +
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y +I G ++ + A + + M
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHM 378
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 176/327 (53%), Gaps = 3/327 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+S N+M++M P + + ++ SL K H + A+SL QME GI+P +V L+
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C+ G+ A S+L G+ KR +PD ITF LI GK A + +++++
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N +Y +LING C G A ++ ++ +G PDVV Y ++I+ CK K V A +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM KG++ N +TY+ LI GF VG+ A + M + + P++ TY +L+ L
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 281 EGKVREAKNMLAVMIKQ---GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
GKV++A + M K+ GV P++ TYN L+ G C ++ KA VF M +R
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+ +Y III G+CK A+NL +
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSL 486
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 38/297 (12%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA S M + P + FN ++ + VK + A L ++M I P++ T LI
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N +C G ++ A + + +G PD + +T+LI G C K+ A++ ++ +G
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N ++Y TLI G ++G+ + A E+ + RG+ P++ YN ++ LC + V A +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 221 YSEMVAK---GISPNVVTYSAL-----------------------------------IYG 242
+ +M + G++PN+ TY+ L I G
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 243 FCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
C G++K A+ L + K + P+V TYT ++ L +EG EA + M + GV
Sbjct: 470 MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 3/193 (1%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ F M Q T + ++ + + A + M G+ P++ T N+L+
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 101 NCYCHLGQINSAFSVLAGILKR---GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+C C+ G++ A + + KR G P+ T+ L+ GLC +GK+++AL +D+ +
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ ++Y +I G+CK G+ A+ L + +G+KP+VV Y T+I L ++ L A
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Query: 218 FDLYSEMVAKGIS 230
L+ +M G+S
Sbjct: 515 HVLFRKMKEDGVS 527
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 181/323 (56%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A++ F++M P + +N ++ K + L M G++P+L++ N++IN
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C G++ VL + +RGY D +T+ TLIKG C G +AL H ++L G
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ ++Y +LI+ +CK G + A+E L +++ RG+ P+ Y T++D + ++ A+ +
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM G SP+VVTY+ALI G C+ G+++ AI +L++M K + PDV +Y+ ++ +
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
V EA + M+++G+KPD +TY+SL+ G+C +A D++ M + G PD +Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
+IN C ++AL L EM
Sbjct: 524 TALINAYCMEGDLEKALQLHNEM 546
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 176/310 (56%), Gaps = 1/310 (0%)
Query: 56 PPIFEFNKVLTSLVKTK-HYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
P + +N VL + +++K + S A ++ +M + + P++ T NILI +C G I+ A +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ + +G P+ +T+ TLI G C KI + + +G N +SY +INGLC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
+ G +L + RG D V YNT+I CK+ A +++EM+ G++P+V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
TY++LI+ C G + +A+ LD+M ++ + P+ TYT LVD ++G + EA +L M
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
G P VVTYN+L++G+C+ ++ A V M ++G +PDV SY+ +++G C+
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 355 DEALNLLAEM 364
DEAL + EM
Sbjct: 467 DEALRVKREM 476
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 180/332 (54%), Gaps = 15/332 (4%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
ML+ TP + + ++ S+ K + + A+ QM G+ P+ T L++ + G
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+N A+ VL + G+ P +T+ LI G C+ GK++ A+ +D+ +G + VSY
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
T+++G C+ + AL + R + +GIKPD + Y+++I C+ + A DLY EM+
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G+ P+ TY+ALI +C+ G L++A+ L +EM K + PDV TY++L++ L K+ + REA
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 288 KNMLAVMIKQGVKPDVVTYN---------------SLMDGYCLVNEVNKAQDVFNAMSQR 332
K +L + + P VTY+ SL+ G+C+ + +A VF +M +
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 333 GETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
PD +YNI+I+G C+ +A L EM
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 177/319 (55%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F ML+ +P +F +N ++ + A++L +ME G P++VT N LI+ YC
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
L +I+ F +L + +G +P+ I++ +I GLC G+++ ++ +G+ L++V+
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y TLI G CK G AL + + G+ P V+ Y ++I S+CK ++ A + +M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
+G+ PN TY+ L+ GF G + +A +L EM P V TY L++ GK+
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
+A +L M ++G+ PDVV+Y++++ G+C +V++A V M ++G PD +Y+ +I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 346 NGLCKIKMADEALNLLAEM 364
G C+ + EA +L EM
Sbjct: 493 QGFCEQRRTKEACDLYEEM 511
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 15/271 (5%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI+ M + +P + ++ VL+ ++ A+ + +M GIKP +T + LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+C + A + +L+ G PD T+T LI C+ G +++ALQ H++++ +G L
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS------------- 207
+ V+Y LINGL K T A LL ++ P V Y+T+I++
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 208 --LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
C +++ A ++ M+ K P+ Y+ +I+G C G +++A L EM
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
T LV AL KEGKV E +++ +++
Sbjct: 673 LHTVTVIALVKALHKEGKVNELNSVIVHVLR 703
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 109/200 (54%), Gaps = 1/200 (0%)
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL-VSHAFDLYSEM 224
+ ++ +L AL ++ Q G P V+ YN ++D+ + K +S A +++ EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
+ +SPNV TY+ LI GFC G + A+ L D+M K P+V TY L+D K K+
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
+ +L M +G++P++++YN +++G C + + V M++RG + D +YN +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 345 INGLCKIKMADEALNLLAEM 364
I G CK +AL + AEM
Sbjct: 317 IKGYCKEGNFHQALVMHAEM 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQ-LKQAIGLLDE 258
+++ ++ S + L+ A + A G P V++Y+A++ + + A + E
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 259 MGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE 318
M + P+V+TY IL+ G + A + M +G P+VVTYN+L+DGYC + +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 319 VNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ + +M+ +G P++ SYN++INGLC+ E +L EM
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 186/359 (51%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA S F MLQ P I +F +VLT + K + I L H+ME GI L + ILI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+C+C +++ A ++L ++K G++P +T +L+ G C + Q A+ D + GF+
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT----------------- 203
N V Y T+INGLCK + + ALE+ ++ +GI+ D V YNT
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 204 ------------------IIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
+ID+ K+ + A +LY EM+ + + PNV TY++LI GFCI
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G L A + D M K PDV TY L+ K +V + + M QG+ D T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN+L+ GYC ++N AQ VFN M G +PD+ +YNI+++ LC ++AL ++ ++
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 169/324 (52%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+S + M P + +N V+ L K + + A+ + + ME GI+ VT N LI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + G+ A +L ++KR P+ I FT LI G + A + +++ + +
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N +Y +LING C G A + + +G PDVV YNT+I CK K V L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM +G+ + TY+ LI+G+C G+L A + + M + PD+ TY IL+D L
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GK+ +A M+ + K + D++TYN ++ G C +++ +A +F +++++G PD +
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y +I+GLC+ + EA L M
Sbjct: 467 YITMISGLCRKGLQREADKLCRRM 490
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 149/282 (52%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N +++ L + ++ A L M I P+++ LI+ + G + A ++ ++
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+R P+ T+ +LI G C+HG + A D ++++G + V+Y TLI G CK
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
++L + +G+ D YNT+I C+ ++ A +++ MV G+SP++VTY+ L+
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
C G++++A+ +++++ +D D+ TY I++ L + K++EA + + ++GVK
Sbjct: 402 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN 342
PD + Y +++ G C +A + M + G P Y+
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 138/274 (50%), Gaps = 1/274 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA M++ P + F ++ + VK + A +L +M + P++ T N LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N +C G + A + ++ +G PD +T+ TLI G C +++ ++ ++ QG +
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +Y TLI+G C+ G+ + A ++ R+ G+ PD+V YN ++D LC + + A +
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
++ + +++TY+ +I G C +LK+A L + K + PD Y ++ L +
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYN-SLMDGY 313
+G REA + M + G P Y+ +L D Y
Sbjct: 477 KGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
GDA F+ M+ P + +N ++T K+K + L +M + G+ T N L
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ YC G++N A V ++ G PD +T+ L+ LC +GKI++AL +D+
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
++ ++Y +I GLC+ + A L R + +G+KPD + Y T+I LC+ L A
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 220 LYSEMVAKGISPNVVTY 236
L M G P+ Y
Sbjct: 486 LCRRMKEDGFMPSERIY 502
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 117/245 (47%)
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
H + + AFS+ +L+ P + FT ++ + K + + + G +
Sbjct: 56 HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 115
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
S+ LI+ C+ S AL LL ++ G +P +V ++++ C+ A L M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
G PNVV Y+ +I G C L A+ + M K I D TY L+ L G+
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
+A +L M+K+ + P+V+ + +L+D + + +A++++ M +R P+V +YN +
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 345 INGLC 349
ING C
Sbjct: 296 INGFC 300
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 182/324 (56%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA++ F M + P I +F+++L ++ K Y ISL +E GI L + LI
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+C+C +++ A S L ++K G++P +TF +L+ G C + A+ D ++ G+
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V Y T+I+ LC+ G+ + AL++L+ ++ GI+PDVV YN++I L + +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
S+M+ GISP+V+T+SALI + GQL +A +EM ++++P++ TY L++ L
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G + EAK +L V++ +G P+ VTYN+L++GYC V+ + MS+ G D +
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YN + G C+ A +L M
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRM 385
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 172/324 (53%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+S ++++ + P + +N ++ SL + +TA+ + M+ GI+P +VT N LI
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
H G + +L+ +++ G PD ITF+ LI G++ A + +++++ +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y +LINGLC G A ++L + +G P+ V YNT+I+ CK K V +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
M G+ + TY+ L G+C G+ A +L M + PD+YT+ IL+D L
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GK+ +A L + K ++TYN ++ G C ++V A +F +++ +G +PDV +
Sbjct: 407 HGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVIT 466
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y ++ GL + ++ EA L +M
Sbjct: 467 YITMMIGLRRKRLWREAHELYRKM 490
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 148/290 (51%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ M +M P + +N ++T L + + + + M GI P ++T + LI+
Sbjct: 203 ALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y GQ+ A +++R P+ +T+ +LI GLC+HG + A + + ++++GF
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP 322
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N V+Y TLING CK +++L + G+ D YNT+ C+ S A +
Sbjct: 323 NAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL 382
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
MV+ G+ P++ T++ L+ G C G++ +A+ L+++ + TY I++ L K
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKA 442
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
KV +A + + +GV PDV+TY ++M G +A +++ M +
Sbjct: 443 DKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQK 492
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 177/318 (55%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
+++++ P +F +N + L + A+ + + G KP ++T N LI C
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
+ A L ++ G +PD+ T+ TLI G C G +Q A + D + GF+ +Q +Y
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
+LI+GLC GET+ AL L G+GIKP+V++YNT+I L ++ A L +EM
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
KG+ P V T++ L+ G C +G + A GL+ M K PD++T+ IL+ + K+
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
A +L VM+ GV PDV TYNSL++G C ++ + + M ++G P++ ++NI++
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 347 GLCKIKMADEALNLLAEM 364
LC+ + DEAL LL EM
Sbjct: 540 SLCRYRKLDEALGLLEEM 557
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 169/319 (52%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F +ML + + FNK+L L K L ++ G+ P+L T N+ I C
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ 263
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G+++ A ++ ++++G +PD IT+ LI GLC + K Q A + ++ +G + +
Sbjct: 264 RGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYT 323
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y TLI G CK G A ++ G PD Y ++ID LC + + A L++E +
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
KGI PNV+ Y+ LI G G + +A L +EM K + P+V T+ ILV+ L K G V
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
+A ++ VMI +G PD+ T+N L+ GY ++ A ++ + M G PDV++YN ++
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 346 NGLCKIKMADEALNLLAEM 364
NGLCK ++ + M
Sbjct: 504 NGLCKTSKFEDVMETYKTM 522
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 164/323 (50%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ +++ P + +N ++ L K + A +M G++P T N LI
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
YC G + A ++ + G+ PD T+ +LI GLC G+ RAL ++ L +G
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N + Y TLI GL G A +L + +G+ P+V +N +++ LCK VS A L
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
M++KG P++ T++ LI+G+ +++ A+ +LD M +DPDVYTY L++ L K
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
K + M+++G P++ T+N L++ C ++++A + M + PD ++
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
+I+G CK D A L +M
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKM 592
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 175/359 (48%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ F RM P +F +N +++ LV + ++ A + +M GI P + + I +
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTI------------------------------- 129
+C + ++A +L + +G + + +
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS 213
Query: 130 ----TFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
TF L++ LC G ++ + D V+ +G L N +Y I GLC+ GE A+ +
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
+ + +G KPDV+ YN +I LCK+ A +MV +G+ P+ TY+ LI G+C
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G ++ A ++ + PD +TY L+D L EG+ A + + +G+KP+V+
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN+L+ G + +A + N MS++G P+V ++NI++NGLCK+ +A L+ M
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 159/324 (49%), Gaps = 1/324 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A++ FN L P + +N ++ L A L+++M G+ P + T NIL+N
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C +G ++ A ++ ++ +GY PD TF LI G K++ AL+ D +L G
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +Y +L+NGLCK + +E + + +G P++ +N +++SLC+ + + A L
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG-LKNIDPDVYTYTILVDALGK 280
EM K ++P+ VT+ LI GFC G L A L +M + TY I++ A +
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ V A+ + M+ + + PD TY ++DG+C VN M + G P + +
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
+IN LC EA ++ M
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRM 698
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 161/360 (44%), Gaps = 36/360 (10%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + +M+ P + +N ++ K A + F G P T LI
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ CH G+ N A ++ L +G +P+ I + TLIKGL G I A Q +++ +G +
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Query: 161 LNQVSYGTLINGLCKLGETSA-----------------------------------ALEL 185
++ L+NGLCK+G S ALE+
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L + G+ PDV YN++++ LCK + Y MV KG +PN+ T++ L+ C
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ-GVKPDVV 304
+L +A+GLL+EM K+++PD T+ L+D K G + A + M + V
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP 603
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
TYN ++ + V A+ +F M R PD ++Y ++++G CK + L EM
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%)
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
G++GKV+EA N+ M +P V +YN++M ++A V+ M RG TPDV
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
+S+ I + CK AL LL M
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNM 172
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 57/118 (48%)
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
G++++A+ + + M + +P V++Y ++ L G +A + M +G+ PDV ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M +C + + A + N MS +G +V +Y ++ G + E L +M
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 184/325 (56%), Gaps = 1/325 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYS-TAISLSHQMEFTGIKPSLVTMNIL 99
+A F +ML + N LT L K + + TAI + + G+ ++ + NI+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ C LG+I A +L + +GY PD I+++T++ G C G++ + + + + +G
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N YG++I LC++ + + A E + +GI PD V+Y T+ID CK + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ EM ++ I+P+V+TY+A+I GFC +G + +A L EM K ++PD T+T L++
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
K G +++A + MI+ G P+VVTY +L+DG C +++ A ++ + M + G P++
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
+YN I+NGLCK +EA+ L+ E
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEF 517
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 172/325 (52%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
+A F+ M++ P + ++ K A ++M I P ++T +
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ +C +G + A + + +G +PD++TFT LI G C G ++ A + H+ ++ G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N V+Y TLI+GLCK G+ +A ELL + G++P++ YN+I++ LCK + A
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
L E A G++ + VTY+ L+ +C G++ +A +L EM K + P + T+ +L++
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
G + + + +L M+ +G+ P+ T+NSL+ YC+ N + A ++ M RG PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
+Y ++ G CK + EA L EM
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEM 657
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 166/310 (53%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP + ++ V+ + L M+ G+KP+ +I C + ++ A
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ ++++G PDT+ +TTLI G C G I+ A +F ++ ++ + ++Y +I+G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
++G+ A +L + +G++PD V + +I+ CK + AF +++ M+ G SPNVV
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
TY+ LI G C G L A LL EM + P+++TY +V+ L K G + EA ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
G+ D VTY +LMD YC E++KAQ++ M +G P + ++N+++NG C M
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 355 DEALNLLAEM 364
++ LL M
Sbjct: 578 EDGEKLLNWM 587
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 164/323 (50%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A F M TP + + +++ + A L H+M G++P VT LIN
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
YC G + AF V +++ G P+ +T+TTLI GLC G + A + ++ G
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N +Y +++NGLCK G A++L+ + G+ D V Y T++D+ CK + A ++
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM+ KG+ P +VT++ L+ GFC+ G L+ LL+ M K I P+ T+ LV
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
++ A + M +GV PD TY +L+ G+C + +A +F M +G + V +Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
+++I G K K EA + +M
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQM 692
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 153/294 (52%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + + ++ L + + A +M GI P V LI+ +C G I +A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ R PD +T+T +I G C G + A + ++ +G + V++ LING CK
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G A + + G P+VV Y T+ID LCK+ + A +L EM G+ PN+ T
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y++++ G C G +++A+ L+ E ++ D TYT L+DA K G++ +A+ +L M+
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
+G++P +VT+N LM+G+CL + + + N M +G P+ ++N ++ C
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 162/319 (50%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F+ M P F +++ K H A + + M G P++VT LI+ C
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G ++SA +L + K G QP+ T+ +++ GLC G I+ A++ + A G + V+
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y TL++ CK GE A E+L+ + G+G++P +V +N +++ C ++ L + M+
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
AKGI+PN T+++L+ +CI LK A + +M + + PD TY LV K ++
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
EA + M +G V TY+ L+ G+ + +A++VF+ M + G D ++
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 708
Query: 346 NGLCKIKMADEALNLLAEM 364
+ K K D ++ + E+
Sbjct: 709 DTKYKGKRPDTIVDPIDEI 727
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA N M+Q +P + + ++ L K +A L H+M G++P++ T N ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G I A ++ G DT+T+TTL+ C G++ +A + ++L +G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
V++ L+NG C G +LL + +GI P+ +N+++ C + A +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y +M ++G+ P+ TY L+ G C +K+A L EM K V TY++L+ K
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMD 311
K EA+ + M ++G+ D ++ D
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 124/244 (50%), Gaps = 1/244 (0%)
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK-LGETS 180
+ + D F + L G ++ A + + +L G +L+ S + L K +T+
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A+ + R G+ +V YN +I +C+ + A L M KG +P+V++YS ++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G+C G+L + L++ M K + P+ Y Y ++ L + K+ EA+ + MI+QG+
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
PD V Y +L+DG+C ++ A F M R TPDV +Y II+G C+I EA L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 361 LAEM 364
EM
Sbjct: 409 FHEM 412
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 19/206 (9%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
ML P I FN ++ L + M GI P+ T N L+ YC
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
+ +A ++ + RG PD T+ L+KG C ++ A ++ +GF ++ +Y
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
LI G K + A E+ +++ G+ D FD +S+ KG
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAAD-----------------KEIFDFFSDTKYKG 714
Query: 229 ISPNVVT--YSALIYGFCIVGQLKQA 252
P+ + +I + + QL+ A
Sbjct: 715 KRPDTIVDPIDEIIENYLVDEQLRGA 740
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 184/325 (56%), Gaps = 1/325 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYS-TAISLSHQMEFTGIKPSLVTMNIL 99
+A F +ML + N LT L K + + TAI + + G+ ++ + NI+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ C LG+I A +L + +GY PD I+++T++ G C G++ + + + + +G
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N YG++I LC++ + + A E + +GI PD V+Y T+ID CK + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ EM ++ I+P+V+TY+A+I GFC +G + +A L EM K ++PD T+T L++
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
K G +++A + MI+ G P+VVTY +L+DG C +++ A ++ + M + G P++
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
+YN I+NGLCK +EA+ L+ E
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEF 517
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 172/325 (52%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
+A F+ M++ P + ++ K A ++M I P ++T +
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ +C +G + A + + +G +PD++TFT LI G C G ++ A + H+ ++ G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N V+Y TLI+GLCK G+ +A ELL + G++P++ YN+I++ LCK + A
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
L E A G++ + VTY+ L+ +C G++ +A +L EM K + P + T+ +L++
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
G + + + +L M+ +G+ P+ T+NSL+ YC+ N + A ++ M RG PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
+Y ++ G CK + EA L EM
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEM 657
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 166/310 (53%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP + ++ V+ + L M+ G+KP+ +I C + ++ A
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ ++++G PDT+ +TTLI G C G I+ A +F ++ ++ + ++Y +I+G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
++G+ A +L + +G++PD V + +I+ CK + AF +++ M+ G SPNVV
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
TY+ LI G C G L A LL EM + P+++TY +V+ L K G + EA ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
G+ D VTY +LMD YC E++KAQ++ M +G P + ++N+++NG C M
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 355 DEALNLLAEM 364
++ LL M
Sbjct: 578 EDGEKLLNWM 587
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 164/323 (50%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A F M TP + + +++ + A L H+M G++P VT LIN
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
YC G + AF V +++ G P+ +T+TTLI GLC G + A + ++ G
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N +Y +++NGLCK G A++L+ + G+ D V Y T++D+ CK + A ++
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM+ KG+ P +VT++ L+ GFC+ G L+ LL+ M K I P+ T+ LV
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
++ A + M +GV PD TY +L+ G+C + +A +F M +G + V +Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
+++I G K K EA + +M
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQM 692
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 153/294 (52%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + + ++ L + + A +M GI P V LI+ +C G I +A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ R PD +T+T +I G C G + A + ++ +G + V++ LING CK
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G A + + G P+VV Y T+ID LCK+ + A +L EM G+ PN+ T
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y++++ G C G +++A+ L+ E ++ D TYT L+DA K G++ +A+ +L M+
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
+G++P +VT+N LM+G+CL + + + N M +G P+ ++N ++ C
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 162/319 (50%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F+ M P F +++ K H A + + M G P++VT LI+ C
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G ++SA +L + K G QP+ T+ +++ GLC G I+ A++ + A G + V+
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y TL++ CK GE A E+L+ + G+G++P +V +N +++ C ++ L + M+
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
AKGI+PN T+++L+ +CI LK A + +M + + PD TY LV K ++
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
EA + M +G V TY+ L+ G+ + +A++VF+ M + G D ++
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 708
Query: 346 NGLCKIKMADEALNLLAEM 364
+ K K D ++ + E+
Sbjct: 709 DTKYKGKRPDTIVDPIDEI 727
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA N M+Q +P + + ++ L K +A L H+M G++P++ T N ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G I A ++ G DT+T+TTL+ C G++ +A + ++L +G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
V++ L+NG C G +LL + +GI P+ +N+++ C + A +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y +M ++G+ P+ TY L+ G C +K+A L EM K V TY++L+ K
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMD 311
K EA+ + M ++G+ D ++ D
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 124/244 (50%), Gaps = 1/244 (0%)
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK-LGETS 180
+ + D F + L G ++ A + + +L G +L+ S + L K +T+
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A+ + R G+ +V YN +I +C+ + A L M KG +P+V++YS ++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G+C G+L + L++ M K + P+ Y Y ++ L + K+ EA+ + MI+QG+
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
PD V Y +L+DG+C ++ A F M R TPDV +Y II+G C+I EA L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 361 LAEM 364
EM
Sbjct: 409 FHEM 412
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 19/206 (9%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
ML P I FN ++ L + M GI P+ T N L+ YC
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
+ +A ++ + RG PD T+ L+KG C ++ A ++ +GF ++ +Y
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
LI G K + A E+ +++ G+ D FD +S+ KG
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAAD-----------------KEIFDFFSDTKYKG 714
Query: 229 ISPNVVT--YSALIYGFCIVGQLKQA 252
P+ + +I + + QL+ A
Sbjct: 715 KRPDTIVDPIDEIIENYLVDEQLRGA 740
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 5/325 (1%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A NRML P + ++ L K A L +++ KP +V N LI
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLI 360
Query: 101 NCYCHLGQINSAFSVLAGILKR-GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ + G+++ A +VL+ ++ G PD T+ +LI G G + AL+ D+ +G
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N SY L++G CKLG+ A +L + G+KP+ V +N +I + CK+ + A +
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
++ EM KG P+V T+++LI G C V ++K A+ LL +M + + + TY L++A
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
+ G+++EA+ ++ M+ QG D +TYNSL+ G C EV+KA+ +F M + G P
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
S NI+INGLC+ M +EA+ EM
Sbjct: 601 SCNILINGLCRSGMVEEAVEFQKEM 625
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 186/359 (51%), Gaps = 33/359 (9%)
Query: 39 PGDAISHFNRMLQMPSTPPIFE-FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
PG M + S P F+ +N VL LV + A ++ + M I P+L T
Sbjct: 162 PGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFG 221
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+++ +C + +I+SA S+L + K G P+++ + TLI L ++ ALQ +++
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + + ++ +I GLCK + A +++ R+ RG PD + Y +++ LCK V A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 218 FDLY-------------------------------SEMVAK-GISPNVVTYSALIYGFCI 245
DL+ S+MV GI P+V TY++LIYG+
Sbjct: 342 KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G + A+ +L +M K P+VY+YTILVD K GK+ EA N+L M G+KP+ V
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+N L+ +C + + +A ++F M ++G PDV+++N +I+GLC++ AL LL +M
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 163/308 (52%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + +N ++ K A+ + H M G KP++ + IL++ +C LG+I+ A++V
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L + G +P+T+ F LI C +I A++ ++ +G + ++ +LI+GLC+
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
+ E AL LLR + G+ + V YNT+I++ + + A L +EMV +G + +T
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y++LI G C G++ +A L ++M P + IL++ L + G V EA M+
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
+G PD+VT+NSL++G C + +F + G PD ++N +++ LCK
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 356 EALNLLAE 363
+A LL E
Sbjct: 687 DACLLLDE 694
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 161/309 (52%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G A+ + M P ++ + ++ K A ++ ++M G+KP+ V N L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ +C +I A + + ++G +PD TF +LI GLC +I+ AL D++++G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ N V+Y TLIN + GE A +L+ + +G D + YN++I LC+ V A
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
L+ +M+ G +P+ ++ + LI G C G +++A+ EM L+ PD+ T+ L++ L
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
+ G++ + M + +G+ PD VT+N+LM C V A + + + G P+
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Query: 340 SYNIIINGL 348
+++I++ +
Sbjct: 706 TWSILLQSI 714
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ GY+ + LI L +G+ + + + +G + + + +++ K G
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 181 AALELLRRIQG-RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
L+ ++ +P YN +++ L A +++ +M+++ I P + T+ +
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
+ FC V ++ A+ LL +M P+ Y L+ +L K +V EA +L M G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
PD T+N ++ G C + +N+A + N M RG PD +Y ++NGLCKI D A +
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 360 LL 361
L
Sbjct: 344 LF 345
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 179/325 (55%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G A+ FN M+ + P ++ + V+ SL + K S A + ME TG ++V N+L
Sbjct: 209 GLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVL 268
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ C ++ A + + + +PD +T+ TL+ GLC + + L+ D++L F
Sbjct: 269 IDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRF 328
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
++ + +L+ GL K G+ AL L++R+ G+ P++ +YN +IDSLCK + A
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL 388
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
L+ M G+ PN VTYS LI FC G+L A+ L EM + VY Y L++
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
K G + A+ +A MI + ++P VVTY SLM GYC ++NKA +++ M+ +G P ++
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
++ +++GL + + +A+ L EM
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEM 533
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 181/393 (46%), Gaps = 70/393 (17%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ ++ M P I+ F +L+ L + A+ L ++M +KP+ VT N++I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
YC G ++ AF L + ++G PDT ++ LI GLCL G+ A F D + L
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 162 NQVSYGTLINGLCKLGETSAALE-----------------------------------LL 186
N++ Y L++G C+ G+ AL LL
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIV 246
+ + RG+KPD V+Y ++ID+ K AF ++ M+ +G PN VTY+A+I G C
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 247 GQLKQAIGLLDEMG-----------------------------------LKNIDPDVYTY 271
G + +A L +M LK + + TY
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
+L+ ++G++ EA ++ MI GV PD +TY ++++ C N+V KA +++N+M++
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 332 RGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+G PD +YN +I+G C +A L EM
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 168/324 (51%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ R++ +P +F +N ++ SL K + + A L +M G++P+ VT +ILI
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +C G++++A S L ++ G + + +LI G C G I A F +++ +
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
V+Y +L+ G C G+ + AL L + G+GI P + + T++ L + L+ A L
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
++EM + PN VTY+ +I G+C G + +A L EM K I PD Y+Y L+ L
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G+ EAK + + K + + + Y L+ G+C ++ +A V M QRG D+
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y ++I+G K K LL EM
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEM 673
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 157/302 (51%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + + ++ L K + + + + +M PS ++ L+ G+I A ++
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ ++ G P+ + LI LC K A D + G N V+Y LI+ C+
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 414
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G+ AL L + G+K V YN++I+ CK +S A +EM+ K + P VVT
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y++L+ G+C G++ +A+ L EM K I P +YT+T L+ L + G +R+A + M
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
+ VKP+ VTYN +++GYC +++KA + M+++G PD +SY +I+GLC A
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 356 EA 357
EA
Sbjct: 595 EA 596
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 166/318 (52%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
+ ML + +P + ++ L K A++L ++ G+ P+L N LI+ C
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
+ + A + + K G +P+ +T++ LI C GK+ AL F +++ G L+ Y
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
+LING CK G+ SAA + + + ++P VV Y +++ C ++ A LY EM
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
KGI+P++ T++ L+ G G ++ A+ L +EM N+ P+ TY ++++ +EG + +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
A L M ++G+ PD +Y L+ G CL + ++A+ + + + + Y +++
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 347 GLCKIKMADEALNLLAEM 364
G C+ +EAL++ EM
Sbjct: 621 GFCREGKLEEALSVCQEM 638
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 145/302 (48%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
M+ P + + ++ + A+ L H+M GI PS+ T L++ G
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
I A + + + +P+ +T+ +I+G C G + +A +F ++ +G + + SY
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
LI+GLC G+ S A + + + + + Y ++ C++ + A + EMV +G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
+ ++V Y LI G K GLL EM + + PD YT ++DA K G +EA
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+ +MI +G P+ VTY ++++G C VN+A+ + + M P+ +Y ++ L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762
Query: 349 CK 350
K
Sbjct: 763 TK 764
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 37/263 (14%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+S M+Q + + ++ +K K L +M G+KP V +I
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHG------------------ 142
+ G AF + ++ G P+ +T+T +I GLC G
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 143 ------------------KIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALE 184
+Q+A++ H+ +L +G L N +Y LI G C+ G A E
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 185 LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
L+ R+ G G+ PD + Y T+I+ LC+ V A +L++ M KGI P+ V Y+ LI+G C
Sbjct: 809 LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Query: 245 IVGQLKQAIGLLDEMGLKNIDPD 267
+ G++ +A L +EM + + P+
Sbjct: 869 VAGEMGKATELRNEMLRQGLIPN 891
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 20/229 (8%)
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL- 213
L +GF + S+ LI+ L K A LL+ + R +KP V +N + K KL
Sbjct: 96 LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDV-FNVLFSCYEKCKLS 154
Query: 214 VSHAFDL-----------------YSEMVAK-GISPNVVTYSALIYGFCIVGQLKQAIGL 255
S +FDL + M+ K + P V T SAL++G A+ L
Sbjct: 155 SSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMEL 214
Query: 256 LDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCL 315
++M I PDVY YT ++ +L + + AK M+A M G ++V YN L+DG C
Sbjct: 215 FNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCK 274
Query: 316 VNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+V +A + ++ + PDV +Y ++ GLCK++ + L ++ EM
Sbjct: 275 KQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 169/307 (55%)
Query: 58 IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLA 117
++ FN ++ K + S A + ++ ++P++V+ N LIN YC +G ++ F +
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+ K +PD T++ LI LC K+ A D++ +G + N V + TLI+G + G
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG 359
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
E E +++ +G++PD+V+YNT+++ CK+ + A ++ M+ +G+ P+ +TY+
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
LI GFC G ++ A+ + EM I+ D ++ LV + KEG+V +A+ L M++
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
G+KPD VTY +MD +C + + M G P V +YN+++NGLCK+ A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 358 LNLLAEM 364
LL M
Sbjct: 540 DMLLDAM 546
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 161/310 (51%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N DA F+ + + P + FN ++ K + L HQME + +P + T +
Sbjct: 255 NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LIN C +++ A + + KRG P+ + FTTLI G +G+I + + +L++
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + V Y TL+NG CK G+ AA ++ + RG++PD + Y T+ID C+ V A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
++ EM GI + V +SAL+ G C G++ A L EM I PD TYT+++DA
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
K+G + +L M G P VVTYN L++G C + ++ A + +AM G PD
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 338 VHSYNIIING 347
+YN ++ G
Sbjct: 555 DITYNTLLEG 564
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 128/246 (52%)
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
IL G+ + F L+ C G I A + D++ + VS+ TLING CK+G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
L +++ +PDV Y+ +I++LCK+ + A L+ EM +G+ PN V ++
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 239 LIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG 298
LI+G G++ +M K + PD+ Y LV+ K G + A+N++ MI++G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 299 VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
++PD +TY +L+DG+C +V A ++ M Q G D ++ ++ G+CK +A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 359 NLLAEM 364
L EM
Sbjct: 471 RALREM 476
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 117/215 (54%)
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
F+ ++L GF LN + L+N CK G S A ++ I R ++P VV +NT+I+ C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
K + F L +M P+V TYSALI C ++ A GL DEM + + P+
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
+T L+ + G++ K M+ +G++PD+V YN+L++G+C ++ A+++ + M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+RG PD +Y +I+G C+ + AL + EM
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 100/184 (54%)
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
G L++ + KL T I G +V ++N +++ CK+ +S A ++ E+
Sbjct: 209 GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
+ + P VV+++ LI G+C VG L + L +M PDV+TY+ L++AL KE K+
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
A + M K+G+ P+ V + +L+ G+ E++ ++ + M +G PD+ YN ++N
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 347 GLCK 350
G CK
Sbjct: 389 GFCK 392
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 175/327 (53%), Gaps = 2/327 (0%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G A+S M + P +F +N V+ + K A+ L+++M+ +G SLVT IL
Sbjct: 159 GKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGIL 218
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ +C G+++ A L + G + D + +T+LI+G C G++ R D+VL +G
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
++Y TLI G CKLG+ A E+ + RG++P+V Y +ID LC A
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
L + M+ K PN VTY+ +I C G + A+ +++ M + PD TY IL+ L
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 280 KEGKVREAKNMLAVMIKQG--VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
+G + EA +L +M+K PDV++YN+L+ G C N +++A D+++ + ++ D
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+ NI++N K ++A+ L ++
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQI 485
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 176/329 (53%), Gaps = 3/329 (0%)
Query: 38 NP--GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVT 95
NP +A+S F + + S+ F N ++ LV+++++ A S +M T + V+
Sbjct: 51 NPQLKNAVSVFQQAVDSGSSLA-FAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVS 109
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
++ L+ CY + + AF VLA +LKRG+ + L+KGLC + + +A+ ++
Sbjct: 110 LSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR 169
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
+ + SY T+I G C+ E ALEL ++G G +V + +ID+ CK +
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A EM G+ ++V Y++LI GFC G+L + L DE+ + P TY L+
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
K G+++EA + MI++GV+P+V TY L+DG C V + +A + N M ++ E
Sbjct: 290 RGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
P+ +YNIIIN LCK + +A+ ++ M
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELM 378
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 161/314 (51%), Gaps = 2/314 (0%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
ML+ ++ N +L L + A+SL +M + P + + N +I +C +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
+ A + + G +T+ LI C GK+ A+ F ++ G + V Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
LI G C GE L + RG P + YNT+I CK + A +++ M+ +G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
+ PNV TY+ LI G C VG+ K+A+ LL+ M K+ +P+ TY I+++ L K+G V +A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE--TPDVHSYNIIIN 346
++ +M K+ +PD +TYN L+ G C ++++A + M + PDV SYN +I+
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Query: 347 GLCKIKMADEALNL 360
GLCK +AL++
Sbjct: 433 GLCKENRLHQALDI 446
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 159/349 (45%), Gaps = 72/349 (20%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
G P +T N LI +C LGQ+ A + +++RG +P+ T+T LI GLC GK + A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPD---------- 197
LQ + ++ + N V+Y +IN LCK G + A+E++ ++ R +PD
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 198 ---------------------------VVMYNTIIDSLCKDKLVSHAFDLYSEMVAK--- 227
V+ YN +I LCK+ + A D+Y +V K
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 228 --------------------------------GISPNVVTYSALIYGFCIVGQLKQAIGL 255
I N TY+A+I GFC G L A GL
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 256 LDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCL 315
L +M + + P V+ Y L+ +L KEG + +A + M + PDVV++N ++DG
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 316 VNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ A+ + MS+ G +PD+ +Y+ +IN K+ DEA++ +M
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 153/301 (50%), Gaps = 2/301 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ N M++ P +N ++ L K + A+ + M+ +P +T NIL+
Sbjct: 335 EALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 101 NCYCHLGQINSAFSVLAGILKRGY--QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
C G ++ A +L +LK PD I++ LI GLC ++ +AL +D ++ +
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
++V+ L+N K G+ + A+EL ++I I + Y +ID CK +++ A
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
L +M + P+V Y+ L+ C G L QA L +EM N PDV ++ I++D
Sbjct: 515 GLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
K G ++ A+++L M + G+ PD+ TY+ L++ + + +++A F+ M G PD
Sbjct: 575 LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Query: 339 H 339
H
Sbjct: 635 H 635
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 4/251 (1%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
+ P + +N ++ L K A+ + + VT NIL+N G +N A
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
+ I ++ T+T +I G C G + A + + Y L++ L
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
CK G A L +Q PDVV +N +ID K + A L M G+SP++
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
TYS LI F +G L +AI D+M +PD + + D++ K + + L
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH----ICDSVLKYCISQGETDKLTE 655
Query: 294 MIKQGVKPDVV 304
++K+ V D+V
Sbjct: 656 LVKKLVDKDIV 666
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A F M + + P + FN ++ +K +A SL M G+ P L T + LIN
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ LG ++ A S ++ G++PD +++K G+ + + ++ + +L
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRI 189
++ T+++ +C +SA ++L +R+
Sbjct: 668 DKELTCTVMDYMCN---SSANMDLAKRL 692
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 167/316 (52%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
+L+ P +F +N ++ K A + +M P VT NI+I C G+
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
++ A VL +L QP IT+T LI+ L G + AL+ D++L++G + +Y T
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
+I G+CK G A E++R ++ +G +PDV+ YN ++ +L L ++M ++
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
PNVVTYS LI C G++++A+ LL M K + PD Y+Y L+ A +EG++ A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
L MI G PD+V YN+++ C + ++A ++F + + G +P+ SYN + + L
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 349 CKIKMADEALNLLAEM 364
AL+++ EM
Sbjct: 449 WSSGDKIRALHMILEM 464
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 156/324 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ + ML P +F +N ++ + K A + +E G +P +++ NIL+
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ G+ ++ + P+ +T++ LI LC GKI+ A+ + +G
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ SY LI C+ G A+E L + G PD+V YNT++ +LCK+ A ++
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ ++ G SPN +Y+ + G +A+ ++ EM IDPD TY ++ L +
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
EG V EA +L M P VVTYN ++ G+C + + A +V +M G P+ +
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETT 545
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y ++I G+ EA+ L ++
Sbjct: 546 YTVLIEGIGFAGYRAEAMELANDL 569
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 143/296 (48%), Gaps = 36/296 (12%)
Query: 104 CHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ 163
C G + +L ++++GY PD I T LIKG I +A++ ++L + +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 164 VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC-KDKL--------- 213
+Y LING CK+ A +L R++ + PD V YN +I SLC + KL
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 214 -------------------------VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQ 248
V A L EM+++G+ P++ TY+ +I G C G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNS 308
+ +A ++ + LK +PDV +Y IL+ AL +GK E + ++ M + P+VVTY+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 309 LMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
L+ C ++ +A ++ M ++G TPD +SY+ +I C+ D A+ L M
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 142/279 (50%), Gaps = 1/279 (0%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
+M P + ++ ++T+L + A++L M+ G+ P + + LI +C G
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+++ A L ++ G PD + + T++ LC +GK +AL+ + G N SY
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
T+ + L G+ AL ++ + GI PD + YN++I LC++ +V AF+L +M +
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
P+VVTY+ ++ GFC +++ AI +L+ M P+ TYT+L++ +G G EA
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
+ +++ + ++ L + L+N + ++ F
Sbjct: 563 MELANDLVRIDAISE-YSFKRLHRTFPLLNVLQRSSQTF 600
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI M+ P I +N VL +L K A+ + ++ G P+ + N + +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
G A ++ ++ G PD IT+ ++I LC G + A + D+ + F
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ V+Y ++ G CK A+ +L + G G +P+ Y +I+ + + A +L
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 566
Query: 222 SEMV 225
+++V
Sbjct: 567 NDLV 570
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 170/324 (52%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+AI F++M + P N +L K M G +P++ T NI+I
Sbjct: 210 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMI 269
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+C C G + +A + + RG PDT+T+ ++I G G++ + F +++
Sbjct: 270 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 329
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ ++Y LIN CK G+ LE R ++G G+KP+VV Y+T++D+ CK+ ++ A
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y +M G+ PN TY++LI C +G L A L +EM ++ +V TYT L+D L
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+++EA+ + M GV P++ +YN+L+ G+ +++A ++ N + RG PD+
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y I GLC ++ + A ++ EM
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEM 533
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 159/304 (52%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
F+ + + L+ AI +M+ + P + N L++ + LG+ + ++
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G +P T+ +I +C G ++ A +++ +G + + V+Y ++I+G K+G
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
+ ++ +PDV+ YN +I+ CK + + Y EM G+ PNVV+YS L+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
FC G ++QAI +M + P+ YTYT L+DA K G + +A + M++ GV+
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
+VVTY +L+DG C + +A+++F M G P++ SYN +I+G K K D AL L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 361 LAEM 364
L E+
Sbjct: 495 LNEL 498
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 163/324 (50%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D F M+ + P +F +N ++ + K A L +M+F G+ P VT N +I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + +G+++ + +PD IT+ LI C GK+ L+F+ ++ G
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N VSY TL++ CK G A++ ++ G+ P+ Y ++ID+ CK +S AF L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+EM+ G+ NVVTY+ALI G C ++K+A L +M + P++ +Y L+ K
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ A +L + +G+KPD++ Y + + G C + ++ A+ V N M + G +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y +++ K E L+LL EM
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 161/314 (51%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M P +N ++ K + +M+ +P ++T N LINC+C
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G++ + G +P+ ++++TL+ C G +Q+A++F+ D+ G + N+ +
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y +LI+ CK+G S A L + G++ +VV Y +ID LC + + A +L+ +M
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
G+ PN+ +Y+ALI+GF + +A+ LL+E+ + I PD+ Y + L K+
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
AK ++ M + G+K + + Y +LMD Y + + + M + V ++ ++I
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584
Query: 346 NGLCKIKMADEALN 359
+GLCK K+ +A++
Sbjct: 585 DGLCKNKLVSKAVD 598
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 160/325 (49%), Gaps = 1/325 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D + F M M P + +N ++ K + +M+ G+KP++V+ + L+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +C G + A + + G P+ T+T+LI C G + A + +++L G
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y LI+GLC A EL ++ G+ P++ YN +I K K + A +L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+E+ +GI P+++ Y I+G C + +++ A +++EM I + YT L+DA K
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR-GETPDVH 339
G E ++L M + ++ VVT+ L+DG C V+KA D FN +S G +
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
+ +I+GLCK + A L +M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQM 639
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 149/301 (49%), Gaps = 1/301 (0%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N DA N MLQ+ + + ++ L + A L +M+ G+ P+L + N
Sbjct: 417 NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 476
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI+ + ++ A +L + RG +PD + + T I GLC KI+ A +++
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G N + Y TL++ K G + L LL ++ I+ VV + +ID LCK+KLVS A
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Query: 218 FDLYSEMVAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
D ++ + G+ N ++A+I G C Q++ A L ++M K + PD YT L+D
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
K+G V EA + M + G+K D++ Y SL+ G N++ KA+ M G P
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Query: 337 D 337
D
Sbjct: 717 D 717
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 158/345 (45%), Gaps = 36/345 (10%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + ++ ++ + K AI M G+ P+ T LI+ C +G ++ AF +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+L+ G + + +T+T LI GLC +++ A + + G + N SY LI+G K
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
ALELL ++GRGIKPD+++Y T I LC + + A + +EM GI N +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK--------------- 280
Y+ L+ + G + + LLDEM +I+ V T+ +L+D L K
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 281 ---------------------EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
+ +V A + M+++G+ PD Y SLMDG V
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 320 NKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+A + + M++ G D+ +Y ++ GL +A + L EM
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQM--EFTGIKPSLVT 95
NP + + + M ++ + F ++ L K K S A+ +++ +F G++ +
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF-GLQANAAI 615
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
+I+ C Q+ +A ++ ++++G PD +T+L+ G G + AL D +
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVM 200
G L+ ++Y +L+ GL + A L + G GI PD V+
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 720
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 185/361 (51%), Gaps = 38/361 (10%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI F M + P + + ++ L K + A+ L +M+ G PS V N+LI+
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C G + ++ + +G P+ +T+ TLI GLCL GK+ +A+ + +++ +
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 162 NQVSYGTLINGLCKL-----------------------------------GETSAALELL 186
N V+YGTLINGL K G+ A+ L
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIV 246
R++ +G KP++V+Y+ ++D LC++ + A ++ + M+A G PN TYS+L+ GF
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKT 445
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
G ++A+ + EM + + Y++L+D L G+V+EA + + M+ G+KPD V Y
Sbjct: 446 GLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAY 505
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGE---TPDVHSYNIIINGLCKIKMADEALNLLAE 363
+S++ G C + ++ A +++ M + E PDV +YNI+++GLC K A++LL
Sbjct: 506 SSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNS 565
Query: 364 M 364
M
Sbjct: 566 M 566
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 161/318 (50%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
N + M +P FN V+ +L K + AI + M P T L++ C
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
+I+ A +L + G P + + LI GLC G + R + D++ +G + N+V+Y
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
TLI+GLC G+ A+ LL R+ P+ V Y T+I+ L K + + A L S M
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
+G N YS LI G G+ ++A+ L +M K P++ Y++LVD L +EGK E
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
AK +L MI G P+ TY+SLM G+ +A V+ M + G + + Y+++I+
Sbjct: 416 AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Query: 347 GLCKIKMADEALNLLAEM 364
GLC + EA+ + ++M
Sbjct: 476 GLCGVGRVKEAMMVWSKM 493
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 24/239 (10%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P +A NRM+ P + ++ ++ KT A+ + +M+ TG + ++
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
LI+ C +G++ A V + +L G +PDT+ ++++IKGLC G + AL+ + ++L Q
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 159 FLLNQ---VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC------ 209
+Q V+Y L++GLC + S A++LL + RG PDV+ NT +++L
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSC 592
Query: 210 ---------------KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
K + VS A + M+ K ++P T++ ++ C ++ AI
Sbjct: 593 DKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 176/335 (52%), Gaps = 9/335 (2%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
P D++ F++M P + VL LV+ + A M G+ P++ ++N
Sbjct: 101 RPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLN 160
Query: 98 ILINCYC-HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
+LI C + G +++ + + KRG PD+ T+ TLI GLC G+I A + +++
Sbjct: 161 VLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVE 220
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+ V+Y +LINGLC A+ L ++ +GI+P+V Y++++D LCKD
Sbjct: 221 KDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQ 280
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A +L+ M+A+G PN+VTY+ LI G C ++++A+ LLD M L+ + PD Y ++
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTY-------NSLMDGYCLVNEVNKAQDVFNAM 329
K REA N L MI G+ P+ +T+ N ++ G C N ++A ++ +M
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSM 399
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
RG + +V + ++ LCK +A+ L+ E+
Sbjct: 400 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEI 434
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 8/258 (3%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A F M++ P + + ++ L +K+ A+ +M+ GI+P++ T + L+
Sbjct: 210 EAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLM 269
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C G+ A + ++ RG +P+ +T+TTLI GLC KIQ A++ D + QG
Sbjct: 270 DGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLK 329
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYN-------TIIDSLCKDKL 213
+ YG +I+G C + + A L + GI P+ + +N ++ LC +
Sbjct: 330 PDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-Y 388
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTI 273
S AF LY M ++GIS V T +L+ C G+ ++A+ L+DE+ P T+ +
Sbjct: 389 PSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKL 448
Query: 274 LVDALGKEGKVREAKNML 291
L+ + V EA + L
Sbjct: 449 LIGHTLDKTIVGEASDTL 466
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N +A+ + M P +F ++ ++ L K A+ L M G +P++VT
Sbjct: 242 NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI C +I A +L + +G +PD + +I G C K + A F D+++
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG 361
Query: 158 GFLLNQVSY-------GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
G N++++ ++ GLC S A L ++ RGI +V +++ LCK
Sbjct: 362 GITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCK 420
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A L E+V G P+ T+ LI
Sbjct: 421 KGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 180/358 (50%), Gaps = 36/358 (10%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
+IS+FN M+ P FN +LT +V + ++ S ++ + + + + + ILI
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK-SKVVLDVYSFGILIK 171
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C G+I +F +L + + G+ P+ + +TTLI G C G+I++A ++ G +
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N+ +Y LINGL K G E+ ++Q G+ P++ YN +++ LCKD AF ++
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 222 SEMVAKGIS-----------------------------------PNVVTYSALIYGFCIV 246
EM +G+S PN++TY+ LI GFC V
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
G+L +A+ L ++ + + P + TY ILV ++G A M+ M ++G+KP VTY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
L+D + + + KA + +M + G PDVH+Y+++I+G C +EA L M
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 163/304 (53%), Gaps = 6/304 (1%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
++ L K + +M+ G+ P+L T N ++N C G+ AF V + +RG
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
+ +T+ TLI GLC K+ A + D + + G N ++Y TLI+G C +G+ AL
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
L R ++ RG+ P +V YN ++ C+ S A + EM +GI P+ VTY+ LI F
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 244 CIVGQLKQAIGL---LDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
+++AI L ++E+GL PDV+TY++L+ +G++ EA + M+++ +
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLV---PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
P+ V YN+++ GYC +A + M ++ P+V SY +I LCK + + EA L
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Query: 361 LAEM 364
+ +M
Sbjct: 536 VEKM 539
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 170/328 (51%), Gaps = 3/328 (0%)
Query: 40 GDAISHFNRMLQMPS---TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTM 96
G+ F+ ++++ +P + + ++ K A L +M G+ + T
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
+LIN G F + + + G P+ T+ ++ LC G+ + A Q D++
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+G N V+Y TLI GLC+ + + A +++ +++ GI P+++ YNT+ID C +
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A L ++ ++G+SP++VTY+ L+ GFC G A ++ EM + I P TYTIL+D
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
+ + +A + M + G+ PDV TY+ L+ G+C+ ++N+A +F +M ++ P
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 337 DVHSYNIIINGLCKIKMADEALNLLAEM 364
+ YN +I G CK + AL LL EM
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEM 504
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 153/299 (51%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ +M + P ++ +N V+ L K A + +M G+ ++VT N LI C
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
++N A V+ + G P+ IT+ TLI G C GK+ +AL D+ ++G + V+
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y L++G C+ G+TS A ++++ ++ RGIKP V Y +ID+ + + A L M
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
G+ P+V TYS LI+GFCI GQ+ +A L M KN +P+ Y ++ KEG
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
A +L M ++ + P+V +Y +++ C + +A+ + M G P ++I
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 1/301 (0%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
++ S V+++ + +IS ++M G P N L+ N +S K
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN-KSK 158
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
D +F LIKG C G+I+++ ++ GF N V Y TLI+G CK GE A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
+L + G+ + Y +I+ L K+ + F++Y +M G+ PN+ TY+ ++
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
C G+ K A + DEM + + ++ TY L+ L +E K+ EA ++ M G+ P++
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
+TYN+L+DG+C V ++ KA + + RG +P + +YNI+++G C+ A ++ E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 364 M 364
M
Sbjct: 399 M 399
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 134/263 (50%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA F+ M + + I +N ++ L + + A + QM+ GI P+L+T N LI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +C +G++ A S+ + RG P +T+ L+ G C G A + ++ +G
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
++V+Y LI+ + A++L ++ G+ PDV Y+ +I C ++ A L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ MV K PN V Y+ +I G+C G +A+ LL EM K + P+V +Y +++ L K
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 281 EGKVREAKNMLAVMIKQGVKPDV 303
E K +EA+ ++ MI G+ P
Sbjct: 526 ERKSKEAERLVEKMIDSGIDPST 548
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G A+S + +P + +N +++ + S A + +ME GIKPS VT IL
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ + + A + + + G PD T++ LI G C+ G++ A + ++ +
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N+V Y T+I G CK G + AL+LL+ ++ + + P+V Y +I+ LCK++ A
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Query: 220 LYSEMVAKGISPNV 233
L +M+ GI P+
Sbjct: 535 LVEKMIDSGIDPST 548
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 160/307 (52%), Gaps = 1/307 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A S F +L+ P ++ N ++ L + A+ L+ M G++P VT NIL
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ LG I+ A+ V+ +L +G PD IT+T L+ G C G I L D+L++GF L
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 162 NQ-VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N + +++GLCK G AL L +++ G+ PD+V Y+ +I LCK A L
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y EM K I PN T+ AL+ G C G L +A LLD + D+ Y I++D K
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G + EA + V+I+ G+ P V T+NSL+ GYC + +A+ + + + G P V S
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540
Query: 341 YNIIING 347
Y +++
Sbjct: 541 YTTLMDA 547
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 168/307 (54%), Gaps = 1/307 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + FN +++ K A S + G+ PS+ + NILIN C +G I A +
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ + K G +PD++T+ L KG L G I A + D+L +G + ++Y L+ G C+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 176 LGETSAALELLRRIQGRGIKPD-VVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
LG L LL+ + RG + + ++ + ++ LCK + A L+++M A G+SP++V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
YS +I+G C +G+ A+ L DEM K I P+ T+ L+ L ++G + EA+++L +
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
I G D+V YN ++DGY + +A ++F + + G TP V ++N +I G CK +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 355 DEALNLL 361
EA +L
Sbjct: 520 AEARKIL 526
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 142/268 (52%), Gaps = 1/268 (0%)
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDV 154
T + +++ C ++ A L + P ++F +++ G C G + A F V
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
L G + + S+ LINGLC +G + ALEL + G++PD V YN + ++
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD-VYTYTI 273
S A+++ +M+ KG+SP+V+TY+ L+ G C +G + + LL +M + + + + ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 274 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
++ L K G++ EA ++ M G+ PD+V Y+ ++ G C + + + A +++ M +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 334 ETPDVHSYNIIINGLCKIKMADEALNLL 361
P+ ++ ++ GLC+ M EA +LL
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLL 456
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 12/286 (4%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A SL + +G +V NI+I+ Y G I A + +++ G P TF +LI
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
G C I A + D + G + VSY TL++ G T + EL R ++ GI P
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 197 DVVMYNTIIDSLCK------------DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
V Y+ I LC+ +++ +M ++GI P+ +TY+ +I C
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
V L A L+ M +N+D TY IL+D+L G +R+A + + + +Q V
Sbjct: 632 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 691
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
Y +L+ +C+ + A +F+ + RG + Y+ +IN LC+
Sbjct: 692 AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 36/239 (15%)
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N+ +Y T+++GLC+ + A+ LR + + I P VV +N+I+ CK V A +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
++ G+ P+V +++ LI G C+VG + +A+ L +M ++PD TY IL
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSL-------------------------------- 309
G + A ++ M+ +G+ PDV+TY L
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 310 ----MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ G C +++A +FN M G +PD+ +Y+I+I+GLCK+ D AL L EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 98/180 (54%), Gaps = 14/180 (7%)
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
R+ + G+ D++++ + + ++V + + +M + ++ + +Y++++Y F
Sbjct: 117 FRKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF-- 169
Query: 246 VGQLKQAIGLLDEMGLKNI-DPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
++ + D K I D + +TY+ +VD L ++ K+ +A L + + P VV
Sbjct: 170 ----RETDKMWDVY--KEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++NS+M GYC + V+ A+ F + + G P V+S+NI+INGLC + EAL L ++M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%)
Query: 84 MEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK 143
ME GI P +T N +I C + ++ AF L + R + T+ LI LC++G
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Query: 144 IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
I++A F + Q L++ +Y TLI C G+ A++L ++ RG + Y+
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 730
Query: 204 IIDSLCKDKLVS 215
+I+ LC+ L++
Sbjct: 731 VINRLCRRHLMN 742
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 48 RMLQMPSTPP-IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
R ++ PP +N ++ L + KH S A M+ + S T NILI+ C
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
G I A S + + ++ +TTLIK C+ G + A++ +L +GF ++ Y
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 728
Query: 167 GTLINGLCK 175
+IN LC+
Sbjct: 729 SAVINRLCR 737
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 160/307 (52%), Gaps = 1/307 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A S F +L+ P ++ N ++ L + A+ L+ M G++P VT NIL
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ LG I+ A+ V+ +L +G PD IT+T L+ G C G I L D+L++GF L
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 162 NQ-VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N + +++GLCK G AL L +++ G+ PD+V Y+ +I LCK A L
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y EM K I PN T+ AL+ G C G L +A LLD + D+ Y I++D K
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G + EA + V+I+ G+ P V T+NSL+ GYC + +A+ + + + G P V S
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540
Query: 341 YNIIING 347
Y +++
Sbjct: 541 YTTLMDA 547
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 168/307 (54%), Gaps = 1/307 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + FN +++ K A S + G+ PS+ + NILIN C +G I A +
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ + K G +PD++T+ L KG L G I A + D+L +G + ++Y L+ G C+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 176 LGETSAALELLRRIQGRGIKPD-VVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
LG L LL+ + RG + + ++ + ++ LCK + A L+++M A G+SP++V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
YS +I+G C +G+ A+ L DEM K I P+ T+ L+ L ++G + EA+++L +
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
I G D+V YN ++DGY + +A ++F + + G TP V ++N +I G CK +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 355 DEALNLL 361
EA +L
Sbjct: 520 AEARKIL 526
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 142/268 (52%), Gaps = 1/268 (0%)
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDV 154
T + +++ C ++ A L + P ++F +++ G C G + A F V
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
L G + + S+ LINGLC +G + ALEL + G++PD V YN + ++
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD-VYTYTI 273
S A+++ +M+ KG+SP+V+TY+ L+ G C +G + + LL +M + + + + ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 274 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
++ L K G++ EA ++ M G+ PD+V Y+ ++ G C + + + A +++ M +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 334 ETPDVHSYNIIINGLCKIKMADEALNLL 361
P+ ++ ++ GLC+ M EA +LL
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLL 456
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 12/286 (4%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A SL + +G +V NI+I+ Y G I A + +++ G P TF +LI
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
G C I A + D + G + VSY TL++ G T + EL R ++ GI P
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 197 DVVMYNTIIDSLCK------------DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
V Y+ I LC+ +++ +M ++GI P+ +TY+ +I C
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
V L A L+ M +N+D TY IL+D+L G +R+A + + + +Q V
Sbjct: 632 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 691
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
Y +L+ +C+ + A +F+ + RG + Y+ +IN LC+
Sbjct: 692 AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 36/239 (15%)
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N+ +Y T+++GLC+ + A+ LR + + I P VV +N+I+ CK V A +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
++ G+ P+V +++ LI G C+VG + +A+ L +M ++PD TY IL
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSL-------------------------------- 309
G + A ++ M+ +G+ PDV+TY L
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 310 ----MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ G C +++A +FN M G +PD+ +Y+I+I+GLCK+ D AL L EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 98/180 (54%), Gaps = 14/180 (7%)
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
R+ + G+ D++++ + + ++V + + +M + ++ + +Y++++Y F
Sbjct: 117 FRKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF-- 169
Query: 246 VGQLKQAIGLLDEMGLKNI-DPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
++ + D K I D + +TY+ +VD L ++ K+ +A L + + P VV
Sbjct: 170 ----RETDKMWDVY--KEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++NS+M GYC + V+ A+ F + + G P V+S+NI+INGLC + EAL L ++M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%)
Query: 84 MEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK 143
ME GI P +T N +I C + ++ AF L + R + T+ LI LC++G
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Query: 144 IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
I++A F + Q L++ +Y TLI C G+ A++L ++ RG + Y+
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 730
Query: 204 IIDSLCKDKLVS 215
+I+ LC+ L++
Sbjct: 731 VINRLCRRHLMN 742
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 48 RMLQMPSTPP-IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
R ++ PP +N ++ L + KH S A M+ + S T NILI+ C
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
G I A S + + ++ +TTLIK C+ G + A++ +L +GF ++ Y
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 728
Query: 167 GTLINGLCK 175
+IN LC+
Sbjct: 729 SAVINRLCR 737
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 164/316 (51%), Gaps = 1/316 (0%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ ML+ P I+ +NK++ K + A ++ G+ P T LI YC
Sbjct: 206 YMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
++SAF V + +G + + + +T LI GLC+ +I A+ + +
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y LI LC S AL L++ ++ GIKP++ Y +IDSLC A +L +M+
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
KG+ PNV+TY+ALI G+C G ++ A+ +++ M + + P+ TY L+ K V
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVH 444
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
+A +L M+++ V PDVVTYNSL+DG C + A + + M+ RG PD +Y +I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 346 NGLCKIKMADEALNLL 361
+ LCK K +EA +L
Sbjct: 505 DSLCKSKRVEEACDLF 520
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 161/304 (52%), Gaps = 1/304 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N +L SL + + +M + P++ T N ++N YC LG + A ++ I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G PD T+T+LI G C + A + +++ +G N+V+Y LI+GLC
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A++L +++ P V Y +I SLC + S A +L EM GI PN+ TY+ LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
C + ++A LL +M K + P+V TY L++ K G + +A +++ +M + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
P+ TYN L+ GYC N V+KA V N M +R PDV +YN +I+G C+ D A L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 361 LAEM 364
L+ M
Sbjct: 485 LSLM 488
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 162/317 (51%), Gaps = 1/317 (0%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
+ML+ P + +N ++ K A+ + ME + P+ T N LI YC
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-S 441
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
++ A VL +L+R PD +T+ +LI G C G A + + +G + +Q +Y
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
++I+ LCK A +L ++ +G+ P+VVMY +ID CK V A + +M++K
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
PN +T++ALI+G C G+LK+A L ++M + P V T TIL+ L K+G A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
+ M+ G KPD TY + + YC + A+D+ M + G +PD+ +Y+ +I G
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 348 LCKIKMADEALNLLAEM 364
+ + A ++L M
Sbjct: 682 YGDLGQTNFAFDVLKRM 698
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 177/383 (46%), Gaps = 71/383 (18%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
+A++ M + P I + ++ SL + A L QM G+ P+++T N L
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
IN YC G I A V+ + R P+T T+ LIKG C + +A+ + +L +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKV 458
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
L + V+Y +LI+G C+ G +A LL + RG+ PD Y ++IDSLCK K V A D
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 220 LYSEMVAKGISPNVV-----------------------------------TYSALIYGFC 244
L+ + KG++PNVV T++ALI+G C
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 245 IVGQLKQAIGLLDEM---GLK--------------------------------NIDPDVY 269
G+LK+A L ++M GL+ PD +
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
TYT + +EG++ +A++M+A M + GV PD+ TY+SL+ GY + + N A DV M
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 330 SQRGETPDVHSYNIIINGLCKIK 352
G P H++ +I L ++K
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMK 721
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 169/327 (51%), Gaps = 1/327 (0%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N +A + +++++ P F + ++ + K +A + ++M G + + V
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT 292
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI+ C +I+ A + + P T+T LIK LC + AL ++
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G N +Y LI+ LC + A ELL ++ +G+ P+V+ YN +I+ CK ++ A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
D+ M ++ +SPN TY+ LI G+C + +A+G+L++M + + PDV TY L+D
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
+ G A +L++M +G+ PD TY S++D C V +A D+F+++ Q+G P+
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
V Y +I+G CK DEA +L +M
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKM 558
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 155/332 (46%), Gaps = 18/332 (5%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A+ N+ML+ P + +N ++ ++ ++ +A L M G+ P T
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+I+ C ++ A + + ++G P+ + +T LI G C GK+ A + +L++
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
L N +++ LI+GLC G+ A L ++ G++P V +I L KD HA
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+ + +M++ G P+ TY+ I +C G+L A ++ +M + PD++TY+ L+
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMD---------------GYCLVN---EV 319
G G+ A ++L M G +P T+ SL+ C ++ E
Sbjct: 682 YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEF 741
Query: 320 NKAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
+ ++ M + TP+ SY +I G+C++
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 154/349 (44%), Gaps = 54/349 (15%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + + ++ SL K+K A L +E G+ P++V LI+ YC G+++ A +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L +L + P+++TF LI GLC GK++ A + ++ G + LI+ L K
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G+ A +++ G KPD Y T I + C++ + A D+ ++M G+SP++ T
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL-----GKE--------- 281
YS+LI G+ +GQ A +L M +P +T+ L+ L GK+
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCA 734
Query: 282 ---------------------------------------GKVREAKNMLAVMIK-QGVKP 301
G +R A+ + M + +G+ P
Sbjct: 735 MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 302 DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
+ +N+L+ C + + N+A V + M G P + S ++I GL K
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYK 843
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 124/290 (42%), Gaps = 19/290 (6%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A S F +ML + P + + + + A + +M G+ P L T + LI
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLC--LHGK---------------- 143
Y LGQ N AF VL + G +P TF +LIK L +GK
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME 740
Query: 144 IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQ-GRGIKPDVVMYN 202
++ + ++ N SY LI G+C++G A ++ +Q GI P +++N
Sbjct: 741 FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFN 800
Query: 203 TIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLK 262
++ CK K + A + +M+ G P + + LI G G+ ++ + +
Sbjct: 801 ALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC 860
Query: 263 NIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
D + I++D +GK+G V + VM K G K TY+ L++G
Sbjct: 861 GYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 160/324 (49%), Gaps = 1/324 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI +F +M+ + P + F ++ L K A + +M G KP++ T LI+
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 102 CYCHLGQINSAFSVLAGILKRG-YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C G AF + +++ Y+P+ T+T++I G C K+ RA + QG
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N +Y TLING CK G A EL+ + G P++ YN IDSLCK A++L
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
++ + G+ + VTY+ LI C + QA+ M + D+ IL+ A +
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ K++E++ + +++ G+ P TY S++ YC +++ A F+ M + G PD +
Sbjct: 511 QKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFT 570
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y +I+GLCK M DEA L M
Sbjct: 571 YGSLISGLCKKSMVDEACKLYEAM 594
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 159/286 (55%), Gaps = 1/286 (0%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A+ + M+ G+ PS +TMN ++ LG I A +V + RG PD+ ++ ++
Sbjct: 166 AVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVI 225
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
G GKIQ A ++ ++ +GF+ + + ++ LC+ G + A+ R++ G KP
Sbjct: 226 GCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKP 285
Query: 197 DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 256
+++ + ++ID LCK + AF++ EMV G PNV T++ALI G C G ++A L
Sbjct: 286 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Query: 257 DEMGLKNI-DPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCL 315
++ + P+V+TYT ++ KE K+ A+ + + M +QG+ P+V TY +L++G+C
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 405
Query: 316 VNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
+A ++ N M G P++++YN I+ LCK A EA LL
Sbjct: 406 AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 451
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 160/344 (46%), Gaps = 38/344 (11%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL-INCYCHLGQINSAF 113
TP N VL V+ A ++ +M G+ P + ++ I C+ G+I A
Sbjct: 179 TPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEAD 237
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
L G+++RG+ PD T T ++ LC +G + RA+ + ++ GF N +++ +LI+GL
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD-------------- 219
CK G A E+L + G KP+V + +ID LCK AF
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPN 357
Query: 220 ----------------------LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 257
L+S M +G+ PNV TY+ LI G C G +A L++
Sbjct: 358 VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 417
Query: 258 EMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN 317
MG + P++YTY +D+L K+ + EA +L G++ D VTY L+ C N
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 477
Query: 318 EVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
++N+A F M++ G D+ NI+I C+ K E+ L
Sbjct: 478 DINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 149/272 (54%), Gaps = 4/272 (1%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
M ++ + +G++N A ++ + +G P +IT +++ G I+ A D++
Sbjct: 150 MRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMS 209
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
+G + + SY ++ G + G+ A L + RG PD I+ +LC++ LV+
Sbjct: 210 VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 269
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A + +M+ G PN++ +++LI G C G +KQA +L+EM P+VYT+T L+
Sbjct: 270 RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 329
Query: 276 DALGKEGKVREAKNMLAVMIKQGV-KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
D L K G +A + +++ KP+V TY S++ GYC +++N+A+ +F+ M ++G
Sbjct: 330 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
Query: 335 TPDVHSYNIIINGLCK---IKMADEALNLLAE 363
P+V++Y +ING CK A E +NL+ +
Sbjct: 390 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGD 421
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 124/274 (45%), Gaps = 6/274 (2%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + + ++ K + A L +M+ G+ P++ T LIN +C G A+ +
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ + G+ P+ T+ I LC + A + + + G + V+Y LI CK
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
+ + AL R+ G + D+ + N +I + C+ K + + L+ +V+ G+ P T
Sbjct: 476 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 535
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+++I +C G + A+ M PD +TY L+ L K+ V EA + MI
Sbjct: 536 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMI 595
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
+G+ P VT +L YC K D NAM
Sbjct: 596 DRGLSPPEVTRVTLAYEYC------KRNDSANAM 623
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 118/268 (44%), Gaps = 7/268 (2%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G A N M P I+ +N + SL K A L ++ G++ VT IL
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I C IN A + + K G++ D LI C K++ + + V++ G
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ + +Y ++I+ CK G+ AL+ ++ G PD Y ++I LCK +V A
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTI--LVDA 277
LY M+ +G+SP VT L Y +C A+ LL+ + D ++ T+ LV
Sbjct: 590 LYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL-----DKKLWIRTVRTLVRK 644
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVT 305
L E KV A ++++ D VT
Sbjct: 645 LCSEKKVGVAALFFQKLLEKDSSADRVT 672
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 105/196 (53%)
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
++ ++G + A+ ++ +Q +G+ P + N +++ + L+ +A +++ EM +G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
+ P+ +Y ++ G G++++A L M + PD T T+++ AL + G V A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
MI G KP+++ + SL+DG C + +A ++ M + G P+V+++ +I+GL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 349 CKIKMADEALNLLAEM 364
CK ++A L ++
Sbjct: 333 CKRGWTEKAFRLFLKL 348
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 3/292 (1%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F+RM + P + + ++ K + A L + M G P++ T N I+ C
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
+ A+ +L G + D +T+T LI+ C I +AL F + GF +
Sbjct: 441 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRL 500
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
LI C+ + + L + + G+ P Y ++I CK+ + A + M
Sbjct: 501 NNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMK 560
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
G P+ TY +LI G C + +A L + M + + P T L K
Sbjct: 561 RHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSA 620
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
A +L + K K + T +L+ C +V A F + ++ + D
Sbjct: 621 NAMILLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSAD 669
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 176/358 (49%), Gaps = 40/358 (11%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ M++ P +F FN V+ +L KT + A + M+ G P++V+ N LI+ YC
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 106 LG--------------------------------------QINSAFSVLAGILKRGYQPD 127
LG + + V +L + +P+
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 128 TITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLR 187
I++ +LI GLC GKI A+ D +++ G N ++Y LING CK AL++
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 188 RIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVG 247
++G+G P MYN +ID+ CK + F L EM +GI P+V TY+ LI G C G
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 248 QLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYN 307
++ A L D++ K + PD+ T+ IL++ ++G+ R+A +L M K G+KP +TYN
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 308 SLMDGYCLVNEVNKAQDVFNAMS-QRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+M GYC + A ++ M +R +V SYN+++ G + ++A LL EM
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 167/339 (49%), Gaps = 39/339 (11%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
++ +L+K + + +M I+P++ T N++IN C G++N A V+ + G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 124 YQPDTITFTTLIKGLCL---HGKIQRA--------------------------------- 147
P+ +++ TLI G C +GK+ +A
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 148 --LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
++ ++L Q N +SY +LINGLC G+ S A+ + ++ G++P+++ YN +I
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 206 DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
+ CK+ ++ A D++ + +G P Y+ LI +C +G++ L +EM + I
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
PDV TY L+ L + G + AK + + +G+ PD+VT++ LM+GYC E KA +
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 326 FNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
MS+ G P +YNI++ G CK A N+ +M
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 166/320 (51%), Gaps = 9/320 (2%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
DA+ M++ +P + FN ++ K + ++ + +M +KP++++ N L
Sbjct: 280 ADAV--LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
IN C+ G+I+ A S+ ++ G QP+ IT+ LI G C + ++ AL V QG
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ Y LI+ CKLG+ L ++ GI PDV YN +I LC++ + A
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
L+ ++ +KG+ P++VT+ L+ G+C G+ ++A LL EM + P TY I++
Sbjct: 458 LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 280 KEGKVREAKNMLAVMIKQ-GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
KEG ++ A NM M K+ ++ +V +YN L+ GY ++ A + N M ++G P+
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 339 HSYNIIINGLCKIKMADEAL 358
+Y I+ K +M D+
Sbjct: 577 ITYEIV-----KEEMVDQGF 591
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 138/269 (51%), Gaps = 3/269 (1%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
PG ++ F ML P + +N ++ L S AIS+ +M G++P+L+T N
Sbjct: 313 PG-SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
LIN +C + A + + +G P T + LI C GKI +++ +G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
+ + +Y LI GLC+ G AA +L ++ +G+ PD+V ++ +++ C+ A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAA 490
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM-GLKNIDPDVYTYTILVDA 277
L EM G+ P +TY+ ++ G+C G LK A + +M + + +V +Y +L+
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
++GK+ +A +L M+++G+ P+ +TY
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 140/262 (53%), Gaps = 7/262 (2%)
Query: 110 NSAFSVLAGILKR----GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
NS F + KR GY+ ++ L+ L + + +++ + N +
Sbjct: 166 NSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFT 225
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK---DKLVSHAFDLYS 222
+ +IN LCK G+ + A +++ ++ G P+VV YNT+ID CK + + A +
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 223 EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
EMV +SPN+ T++ LI GF L ++ + EM +++ P+V +Y L++ L G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 283 KVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN 342
K+ EA +M M+ GV+P+++TYN+L++G+C + + +A D+F ++ +G P YN
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 343 IIINGLCKIKMADEALNLLAEM 364
++I+ CK+ D+ L EM
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEM 427
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 132/245 (53%), Gaps = 2/245 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+AIS ++M+ P + +N ++ K A+ + ++ G P+ N+LI
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ YC LG+I+ F++ + + G PD T+ LI GLC +G I+ A + D + ++G L
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-L 467
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V++ L+ G C+ GE+ A LL+ + G+KP + YN ++ CK+ + A ++
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Query: 221 YSEM-VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
++M + + NV +Y+ L+ G+ G+L+ A LL+EM K + P+ TY I+ + +
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMV 587
Query: 280 KEGKV 284
+G V
Sbjct: 588 DQGFV 592
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
FH + +N + L+ E +R G K + ++ +L
Sbjct: 140 FHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALL 199
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
K+ + +Y EM+ + I PNV T++ +I C G++ +A ++++M + P+V
Sbjct: 200 KENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVV 259
Query: 270 TYTILVDA---LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
+Y L+D LG GK+ +A +L M++ V P++ T+N L+DG+ + + + VF
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319
Query: 327 NAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M + P+V SYN +INGLC EA+++ +M
Sbjct: 320 KEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 169/327 (51%), Gaps = 4/327 (1%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
GDA+ M + P IF +N ++ L K K A S +M G+KP+ T
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ Y + SA + + + G P+ + T LI C GK+ A + ++ QG
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
L + +Y L+NGL K + A E+ R ++G+GI PDV Y +I+ K + A
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
++ EMV +G++PNV+ Y+ L+ GFC G++++A LLDEM +K + P+ TY ++D
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
K G + EA + M +G+ PD Y +L+DG C +N+V +A +F +++G
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTA 767
Query: 340 SYNIIINGLCKI---KMADEALNLLAE 363
+N +IN + K ++ E LN L +
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMD 794
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 169/328 (51%), Gaps = 3/328 (0%)
Query: 38 NPGDAISHFNRMLQMPST---PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLV 94
+ GD +N + +M ++ P + + ++ + ++ + A+ + +M+ GI P +
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDV 154
N LI +++ A S L +++ G +P+ T+ I G + A ++ ++
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
G L N+V LIN CK G+ A R + +GI D Y +++ L K+ V
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
A +++ EM KGI+P+V +Y LI GF +G +++A + DEM + + P+V Y +L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+ + G++ +AK +L M +G+ P+ VTY +++DGYC ++ +A +F+ M +G
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 335 TPDVHSYNIIINGLCKIKMADEALNLLA 362
PD Y +++G C++ + A+ +
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFG 756
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 158/306 (51%)
Query: 59 FEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAG 118
+ + V+ + + A ++ +M +G +P++V LI + + A VL
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
+ ++G PD + +LI GL ++ A F +++ G N +YG I+G + E
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
++A + ++ ++ G+ P+ V+ +I+ CK V A Y MV +GI + TY+
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 239 LIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG 298
L+ G ++ A + EM K I PDV++Y +L++ K G +++A ++ M+++G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 299 VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
+ P+V+ YN L+ G+C E+ KA+++ + MS +G P+ +Y II+G CK EA
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 359 NLLAEM 364
L EM
Sbjct: 718 RLFDEM 723
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 160/328 (48%), Gaps = 5/328 (1%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A S + M+ + ++ L K A + +M GI P + + +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N + LG + A S+ +++ G P+ I + L+ G C G+I++A + D++ +G
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y T+I+G CK G+ + A L ++ +G+ PD +Y T++D C+ V A +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID----PDVYTYTILVD 276
+ KG + + ++ALI G+ + +L+ + + D P+ TY I++D
Sbjct: 755 FGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
L KEG + AK + M + P V+TY SL++GY + + VF+ G P
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 337 DVHSYNIIINGLCKIKMADEALNLLAEM 364
D Y++IIN K M +AL L+ +M
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 141/288 (48%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A +L M +G+ P LI YC + + +L + KR T+ T++K
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
G+C G + A +++A G N V Y TLI + A+ +L+ ++ +GI P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 197 DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 256
D+ YN++I L K K + A EMV G+ PN TY A I G+ + A +
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 257 DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLV 316
EM + P+ T L++ K+GKV EA + M+ QG+ D TY LM+G
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 317 NEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++V+ A+++F M +G PDV SY ++ING K+ +A ++ EM
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 156/321 (48%), Gaps = 10/321 (3%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A S F+ M++ TP + +N +L ++ A L +M G+ P+ VT
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+I+ YC G + AF + + +G PD+ +TTL+ G C ++RA+ +
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKK 760
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQ----GRGIKPDVVMYNTIIDSLCKDKL 213
G + + LIN + K G+T E+L R+ R KP+ V YN +ID LCK+
Sbjct: 761 GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTI 273
+ A +L+ +M + P V+TY++L+ G+ +G+ + + DE I+PD Y++
Sbjct: 821 LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSV 880
Query: 274 LVDALGKEGKVREAKNMLAVM-----IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
+++A KEG +A ++ M + G K + T +L+ G+ V E+ A+ V
Sbjct: 881 IINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMEN 940
Query: 329 MSQRGETPDVHSYNIIINGLC 349
M + PD + +IN C
Sbjct: 941 MVRLQYIPDSATVIELINESC 961
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 127/256 (49%)
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
++ A + ++ +G P T+ LI GLC +++ A ++ + G L+ +Y
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
LI+GL K AA L+ + GI MY+ I + K+ ++ A L+ M+A G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
+ P Y++LI G+C ++Q LL EM +NI YTY +V + G + A
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
N++ MI G +P+VV Y +L+ + + A V M ++G PD+ YN +I GL
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 349 CKIKMADEALNLLAEM 364
K K DEA + L EM
Sbjct: 498 SKAKRMDEARSFLVEM 513
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 136/309 (44%), Gaps = 35/309 (11%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A+ L M G+ P T ++LI+ C + ++ A S+L + G D T++ LI
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 137 GL------------------------------CL-----HGKIQRALQFHDDVLAQGFLL 161
GL C+ G +++A D ++A G +
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+Y +LI G C+ ELL ++ R I Y T++ +C + A+++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM+A G PNVV Y+ LI F + A+ +L EM + I PD++ Y L+ L K
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
++ EA++ L M++ G+KP+ TY + + GY +E A M + G P+
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 342 NIIINGLCK 350
+IN CK
Sbjct: 561 TGLINEYCK 569
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 32/262 (12%)
Query: 104 CHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ 163
C+ G A SV+ +++R + P ++++++ C + ++ D VL
Sbjct: 108 CNFGSFEKALSVVERMIERNW-PVAEVWSSIVR--CSQEFVGKS---DDGVL-------- 153
Query: 164 VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
+G L +G G A+ + G + P + ++D+L + + +D+Y
Sbjct: 154 --FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD-ALGKEG 282
MV + + +V TY LI C G ++ L + L + + T T+ VD AL
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQ-----LGKDVLFKTEKEFRTATLNVDGAL---- 262
Query: 283 KVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN 342
K++E+ MI +G+ P TY+ L+DG C + + A+ + M G + D H+Y+
Sbjct: 263 KLKES------MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 343 IIINGLCKIKMADEALNLLAEM 364
++I+GL K + AD A L+ EM
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEM 338
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 167/322 (51%), Gaps = 3/322 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ F+ L+ S FN ++ L A+ L M G +P +VT N LI
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 101 NCYCHLGQINSAFSVLAGILKRGY--QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
+C ++N A + + K G PD +T+T++I G C GK++ A DD+L G
Sbjct: 249 QGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
V++ L++G K GE A E+ ++ G PDVV + ++ID C+ VS F
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
L+ EM A+G+ PN TYS LI C +L +A LL ++ K+I P + Y ++D
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
K GKV EA ++ M K+ KPD +T+ L+ G+C+ + +A +F+ M G +PD
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 339 HSYNIIINGLCKIKMADEALNL 360
+ + +++ L K MA EA +L
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHL 509
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 164/305 (53%), Gaps = 3/305 (0%)
Query: 62 NKVLTSLVKTKHYSTAISL-SHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
N +L +LVK A+ L + F + T NILI C +G+ A +L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDT-KTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL-NQVSYGTLINGLCKLGET 179
G +PD +T+ TLI+G C ++ +A + DV + + V+Y ++I+G CK G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A LL + GI P V +N ++D K + A ++ +M++ G P+VVT+++L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I G+C VGQ+ Q L +EM + + P+ +TY+IL++AL E ++ +A+ +L + + +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
P YN ++DG+C +VN+A + M ++ PD ++ I+I G C EA++
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 360 LLAEM 364
+ +M
Sbjct: 474 IFHKM 478
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 34/205 (16%)
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
I+ YN + SLCK L A ++ M + G+SPN L+ F G+L A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 254 GLL-------------------------DEMGLKNIDP--------DVYTYTILVDALGK 280
LL E +K D D T+ IL+ L
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF-NAMSQRGETPDVH 339
GK +A +L VM G +PD+VTYN+L+ G+C NE+NKA ++F + S +PDV
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
+Y +I+G CK EA +LL +M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDM 303
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 167/322 (51%), Gaps = 3/322 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ F+ L+ S FN ++ L A+ L M G +P +VT N LI
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 101 NCYCHLGQINSAFSVLAGILKRGY--QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
+C ++N A + + K G PD +T+T++I G C GK++ A DD+L G
Sbjct: 249 QGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
V++ L++G K GE A E+ ++ G PDVV + ++ID C+ VS F
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
L+ EM A+G+ PN TYS LI C +L +A LL ++ K+I P + Y ++D
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
K GKV EA ++ M K+ KPD +T+ L+ G+C+ + +A +F+ M G +PD
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 339 HSYNIIINGLCKIKMADEALNL 360
+ + +++ L K MA EA +L
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHL 509
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 164/305 (53%), Gaps = 3/305 (0%)
Query: 62 NKVLTSLVKTKHYSTAISL-SHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
N +L +LVK A+ L + F + T NILI C +G+ A +L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDT-KTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL-NQVSYGTLINGLCKLGET 179
G +PD +T+ TLI+G C ++ +A + DV + + V+Y ++I+G CK G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A LL + GI P V +N ++D K + A ++ +M++ G P+VVT+++L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I G+C VGQ+ Q L +EM + + P+ +TY+IL++AL E ++ +A+ +L + + +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
P YN ++DG+C +VN+A + M ++ PD ++ I+I G C EA++
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 360 LLAEM 364
+ +M
Sbjct: 474 IFHKM 478
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 34/205 (16%)
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
I+ YN + SLCK L A ++ M + G+SPN L+ F G+L A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 254 GLL-------------------------DEMGLKNIDP--------DVYTYTILVDALGK 280
LL E +K D D T+ IL+ L
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF-NAMSQRGETPDVH 339
GK +A +L VM G +PD+VTYN+L+ G+C NE+NKA ++F + S +PDV
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
+Y +I+G CK EA +LL +M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDM 303
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 165/306 (53%), Gaps = 3/306 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
++ +L SL K A +ME G ++ ++N C G +A ++ IL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL--NQVSYGTLINGLCKLGE 178
K G+ D+ T+L+ G C ++ AL+ D V+++ N VSY LI+GLC++G
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD-VMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
A L ++ +G +P Y +I +LC L+ AF+L+ EM+ +G PNV TY+
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 239 LIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG 298
LI G C G++++A G+ +M I P V TY L++ K+G+V A +L VM K+
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 299 VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
KP+V T+N LM+G C V + KA + M G +PD+ SYN++I+GLC+ + A
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 359 NLLAEM 364
LL+ M
Sbjct: 462 KLLSSM 467
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 167/328 (50%), Gaps = 1/328 (0%)
Query: 38 NPGDAISHFNRML-QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTM 96
N DA+ F+ M ++ P ++ ++ L + A L QM G +PS T
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
+LI C G I+ AF++ ++ RG +P+ T+T LI GLC GKI+ A ++
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+ ++Y LING CK G A ELL ++ R KP+V +N +++ LC+
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A L M+ G+SP++V+Y+ LI G C G + A LL M +I+PD T+T +++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
A K+GK A L +M+++G+ D VT +L+DG C V + A + + +
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 337 DVHSYNIIINGLCKIKMADEALNLLAEM 364
HS N+I++ L K E L +L ++
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKI 572
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 168/323 (52%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A + F+ M+ P + + ++ L + A + +M I PS++T N LIN
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
YC G++ AF +L + KR +P+ TF L++GLC GK +A+ +L G
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ VSY LI+GLC+ G + A +LL + I+PD + + II++ CK A
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
M+ KGIS + VT + LI G C VG+ + A+ +L+ + I ++ +++D L K
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKG 559
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
KV+E ML + K G+ P VVTY +L+DG ++ + + M G P+V+ Y
Sbjct: 560 CKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPY 619
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
IIINGLC+ +EA LL+ M
Sbjct: 620 TIIINGLCQFGRVEEAEKLLSAM 642
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 159/300 (53%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
M + P + FN+++ L + A+ L +M G+ P +V+ N+LI+ C G
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
+N+A+ +L+ + +PD +TFT +I C GK A F +L +G L++V+ T
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
LI+G+CK+G+T AL +L + I N I+D L K V + ++ G
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
+ P+VVTY+ L+ G G + + +L+ M L P+VY YTI+++ L + G+V EA+
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+L+ M GV P+ VTY ++ GY ++++A + AM +RG + Y+ ++ G
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 154/321 (47%), Gaps = 10/321 (3%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P A+ RML +P I +N ++ L + H +TA L M I+P +T
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
+IN +C G+ + A + L +L++G D +T TTLI G+C GK + AL + ++
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
L S +++ L K + L +L +I G+ P VV Y T++D L + ++ +F
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+ M G PNV Y+ +I G C G++++A LL M + P+ TYT++V
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE--VNKAQDVFNAMSQRGETP 336
GK+ A + M+++G + + Y+SL+ G+ L + N + + ++ R P
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDP 721
Query: 337 D--------VHSYNIIINGLC 349
+ V I+GLC
Sbjct: 722 ECINELISVVEQLGGCISGLC 742
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 116/245 (47%), Gaps = 40/245 (16%)
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDK----- 212
GF LN Y +L+ L KL A RR++ G ++ Y TI+++LCK+
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 213 -------------LVSH--------------------AFDLYSEMVAKGISPNVVTYSAL 239
L SH FD+ S+ V +PN V+YS L
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVT--CAPNSVSYSIL 272
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I+G C VG+L++A GL D+MG K P TYT+L+ AL G + +A N+ MI +G
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
KP+V TY L+DG C ++ +A V M + P V +YN +ING CK A
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 360 LLAEM 364
LL M
Sbjct: 393 LLTVM 397
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 169/324 (52%), Gaps = 1/324 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTK-HYSTAISLSHQMEFTGIKPSLVTMNILI 100
A+ F RM + P +F +N +L +++ + + A ++ ++M P+L T IL+
Sbjct: 146 AVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILM 205
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ G+ + A + + RG P+ +T+T LI GLC G A + ++ G
Sbjct: 206 DGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNY 265
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V++ L++G CKLG A ELLR + G + Y+++ID L + + + AF+L
Sbjct: 266 PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFEL 325
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y+ M+ K I P+++ Y+ LI G G+++ A+ LL M K I PD Y Y ++ AL
Sbjct: 326 YANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCG 385
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G + E +++ M + PD T+ L+ C V +A+++F + + G +P V +
Sbjct: 386 RGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVAT 445
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
+N +I+GLCK EA LL +M
Sbjct: 446 FNALIDGLCKSGELKEARLLLHKM 469
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 165/394 (41%), Gaps = 74/394 (18%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A + +N ML+ +P ++ F ++ L K S A + M GI P+ VT ILI+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C G + A + + G PD++ L+ G C G++ A + GF+L
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
Y +LI+GL + + A EL + + IKPD+++Y +I L K + A L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD-------------- 267
S M +KGISP+ Y+A+I C G L++ L EM PD
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421
Query: 268 ---------------------VYTYTILVDALGKEGKVREAKNMLAVM------------ 294
V T+ L+D L K G+++EA+ +L M
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 295 ---------------------------IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
G PD+V+YN L++G+C +++ A + N
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 328 AMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
+ +G +PD +YN +INGL ++ +EA L
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 112/218 (51%), Gaps = 1/218 (0%)
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
Q +++ + G ++ + LI+ K+G A+E R++ +PDV YN I+
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171
Query: 208 LCKDKLVSH-AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP 266
+ ++++ AF +Y+EM+ SPN+ T+ L+ G G+ A + D+M + I P
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 267 DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
+ TYTIL+ L + G +A+ + M G PD V +N+L+DG+C + + +A ++
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 327 NAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ G + Y+ +I+GL + + +A L A M
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 146/363 (40%), Gaps = 48/363 (13%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ + M +P + +N V+ +L SL +M T P T ILI
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA-LQFH-------- 151
C G + A + I K G P TF LI GLC G+++ A L H
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPA 475
Query: 152 --------------DDVLAQGFLLNQ----------------VSYGTLINGLCKLGETSA 181
D ++ G +L VSY LING C+ G+
Sbjct: 476 SLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDG 535
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
AL+LL +Q +G+ PD V YNT+I+ L + AF L+ SP V Y +L+
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMT 593
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP 301
C ++ A L + LK I ++ KEG E + L +I+ +
Sbjct: 594 WSCRKRKVLVAFNLWMKY-LKKISCLDDETANEIEQCFKEG---ETERALRRLIELDTRK 649
Query: 302 DVVT---YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
D +T Y + G C ++A VF+ + ++ S +I+GLCK + D A+
Sbjct: 650 DELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAI 709
Query: 359 NLL 361
+
Sbjct: 710 EVF 712
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+G +I+ L + + L ++ G+ D + +I + K + A + + M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQ-----AIGLLDEMGLKNIDPDVYTYTILVDALGK 280
P+V TY+ ++ V ++ A + +EM N P++YT+ IL+D L K
Sbjct: 155 EFDCRPDVFTYNVILR----VMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G+ +A+ M M +G+ P+ VTY L+ G C + A+ +F M G PD +
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 341 YNIIINGLCKIKMADEALNLL 361
+N +++G CK+ EA LL
Sbjct: 271 HNALLDGFCKLGRMVEAFELL 291
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 201 YNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
+ +ID L +D + E+ + G+S + + LI + +G ++A+ M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAV-----MIKQGVKPDVVTYNSLMDGYCL 315
+ PDV+TY +++ + +E E MLA M+K P++ T+ LMDG
Sbjct: 155 EFDCRPDVFTYNVILRVMMRE----EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 316 VNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ AQ +F+ M+ RG +P+ +Y I+I+GLC+ AD+A L EM
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 163/303 (53%), Gaps = 1/303 (0%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
NKVL L + + LS ++ G P++VT LIN +C G+++ AF + + +
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLD-CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ 314
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
RG +PD I ++TLI G G + + L +G L+ V + + I+ K G+ +
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
A + +R+ +GI P+VV Y +I LC+D + AF +Y +++ +G+ P++VTYS+LI
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP 301
GFC G L+ L ++M PDV Y +LVD L K+G + A M+ Q ++
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 302 DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
+VV +NSL+DG+C +N ++A VF M G PDV ++ ++ +EAL L
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 362 AEM 364
M
Sbjct: 555 FRM 557
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 181/388 (46%), Gaps = 70/388 (18%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ RML +P + + ++ L + A + Q+ G++PS+VT + LI+ +C
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G + S F++ ++K GY PD + + L+ GL G + A++F +L Q LN V
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 166 YGTLINGLCKLGETSAALELLRRI---------------------QGR------------ 192
+ +LI+G C+L AL++ R + +GR
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 193 --GIKPDVVMYNTIIDSLCK----------------DKL-------------------VS 215
G++PD + Y T+ID+ CK +K+ +
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 618
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A ++ ++ + P++VTY+ +I G+C + +L +A + + + + P+ T TIL+
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
L K + A M ++M ++G KP+ VTY LMD + ++ + +F M ++G +
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAE 363
P + SY+III+GLCK DEA N+ +
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 161/351 (45%), Gaps = 35/351 (9%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A F M Q P + ++ ++ K L Q G+K +V + I+
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y G + +A V +L +G P+ +T+T LIKGLC G+I A + +L +G
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ V+Y +LI+G CK G + L + G PDVV+Y ++D L K L+ HA
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
+M+ + I NVV +++LI G+C + + +A+ + MG+ I PDV T+T ++ E
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC--------------------------- 314
G++ EA + M K G++PD + Y +L+D +C
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604
Query: 315 --------LVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
+ + A FN + + PD+ +YN +I G C ++ DEA
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 35/312 (11%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
FN ++ + + A+ + M GIKP + T ++ G++ A + +
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 121 KRGYQPDTITFTTLIKGLCLHGK-----------------------------------IQ 145
K G +PD + + TLI C H K I+
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 618
Query: 146 RALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
A +F ++++ + V+Y T+I G C L A + ++ P+ V +I
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 206 DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
LCK+ + A ++S M KG PN VTY L+ F ++ + L +EM K I
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
P + +Y+I++D L K G+V EA N+ I + PDVV Y L+ GYC V + +A +
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 798
Query: 326 FNAMSQRGETPD 337
+ M + G PD
Sbjct: 799 YEHMLRNGVKPD 810
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 155/354 (43%), Gaps = 35/354 (9%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ M++M P + + ++ L K A+ S +M I+ ++V N LI+ +C
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
L + + A V + G +PD TFTT+++ + G+++ AL + G + ++
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGI------------------------------- 194
Y TLI+ CK + + L+L +Q I
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Query: 195 ----KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLK 250
+PD+V YNT+I C + + A ++ + PN VT + LI+ C +
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 251 QAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
AI + M K P+ TY L+D K + + + M ++G+ P +V+Y+ ++
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 748
Query: 311 DGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
DG C V++A ++F+ PDV +Y I+I G CK+ EA L M
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F RM +M P + ++ + K + + L M+ I + N++I
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 608
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +I A +++ +PD +T+ T+I G C ++ A + + + F
Sbjct: 609 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 668
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+ LI+ LCK + A+ + + +G KP+ V Y ++D K + +F L
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM KGISP++V+YS +I G C G++ +A + + + PDV Y IL+ K
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 281 EGKVREAKNMLAVMIKQGVKPD 302
G++ EA + M++ GVKPD
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPD 810
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 130/269 (48%), Gaps = 2/269 (0%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
L+ C C G ++ A + + G + ++ L ++ D +
Sbjct: 150 KFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCR 209
Query: 157 QGFLLNQVS-YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
G + VS +G +++ L GE + AL+ R + RG + +V N ++ L D+ +
Sbjct: 210 GGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IE 268
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A L S ++ G +PNVVT+ LI GFC G++ +A L M + I+PD+ Y+ L+
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
D K G + + + + +GVK DVV ++S +D Y ++ A V+ M +G +
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
P+V +Y I+I GLC+ EA + ++
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 113/230 (49%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
P + F+ M + + I N V+ L K A + + ++P +VT N
Sbjct: 581 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 640
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+I YC L +++ A + + + P+T+T T LI LC + + A++ + +
Sbjct: 641 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 700
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G N V+YG L++ K + + +L +Q +GI P +V Y+ IID LCK V A
Sbjct: 701 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
+++ + + + P+VV Y+ LI G+C VG+L +A L + M + PD
Sbjct: 761 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 165/309 (53%), Gaps = 3/309 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + +N +L+ + S + +M+ G+ P V+ NILI + G + AF+
Sbjct: 293 PDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
++K+G P T+ TLI GL + KI+ A ++ +G +L+ V+Y LING C+
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G+ A L + GI+P Y ++I LC+ A +L+ ++V KG+ P++V
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
+ L+ G C +G + +A LL EM + +I+PD TY L+ L EGK EA+ ++ M
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK 529
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
++G+KPD ++YN+L+ GY + A V + M G P + +YN ++ GL K + +
Sbjct: 530 RRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGE 589
Query: 356 EALNLLAEM 364
A LL EM
Sbjct: 590 LAEELLREM 598
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 154/311 (49%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N G A M ++ P +N ++ A + +M G+ P+ T N
Sbjct: 307 NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYN 366
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI+ +I +A ++ I ++G D++T+ LI G C HG ++A HD+++
Sbjct: 367 TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G Q +Y +LI LC+ +T A EL ++ G+G+KPD+VM NT++D C + A
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
F L EM I+P+ VTY+ L+ G C G+ ++A L+ EM + I PD +Y L+
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 546
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
K+G + A + M+ G P ++TYN+L+ G E A+++ M G P+
Sbjct: 547 YSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Query: 338 VHSYNIIINGL 348
S+ +I +
Sbjct: 607 DSSFCSVIEAM 617
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 166/359 (46%), Gaps = 38/359 (10%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+AI F M + P N +LT L + A M IK ++ T NI+I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G++ A L + G +P +T+ TL++G L G+I+ A ++ ++GF
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +Y +++ +C G S E+LR ++ G+ PD V YN +I + + AF
Sbjct: 293 PDMQTYNPILSWMCNEGRAS---EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 221 YSEMVAKGISPNVVTYSALIY-----------------------------------GFCI 245
EMV +G+ P TY+ LI+ G+C
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G K+A L DEM I P +TYT L+ L ++ K REA + ++ +G+KPD+V
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
N+LMDG+C + +++A + M PD +YN ++ GLC +EA L+ EM
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 528
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 3/273 (1%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH 151
S + ++L+ C C L ++ A + ++G+ P T T ++ L +I+ A F+
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
D+ N ++ +IN LCK G+ A L ++ GIKP +V YNT++
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTY 271
+ A + SEM +KG P++ TY+ ++ C G+ + + + E+GL PD +Y
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLV---PDSVSY 330
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
IL+ G + A M+KQG+ P TYN+L+ G + N++ A+ + + +
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 332 RGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+G D +YNI+ING C+ A +A L EM
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 156/289 (53%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
N +L L + A + ++ G V+ N LI+ C +++ AF L ++K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
RG +PD T++ LI GL K++ A+QF DD G L + +Y +I+G CK T
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
E + + ++P+ V+YN +I + C+ +S A +L +M KGISPN TY++LI
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP 301
G I+ ++++A L +EM ++ ++P+V+ YT L+D GK G++ + + +L M + V P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 302 DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
+ +TY ++ GY V +A + N M ++G PD +Y I G K
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 169/360 (46%), Gaps = 35/360 (9%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
GDA M + P + +N ++ S ++ + AI + M G+ + T N L
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFT--------------------------- 132
I YC GQ ++A +L +L G+ + +FT
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466
Query: 133 --------TLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALE 184
TLI GLC HGK +AL+ L +GF+++ + L++GLC+ G+ A
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 185 LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
+ + I GRG D V YNT+I C K + AF EMV +G+ P+ TYS LI G
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
+ ++++AI D+ + PDVYTY++++D K + E + M+ + V+P+ V
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN L+ YC ++ A ++ M +G +P+ +Y +I G+ I +EA L EM
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 160/323 (49%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ ML +P +++ L K +S A+ L Q G T N L++
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C G+++ AF + IL RG D +++ TLI G C K+ A F D+++ +G
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +Y LI GL + + A++ + G+ PDV Y+ +ID CK + + +
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM++K + PN V Y+ LI +C G+L A+ L ++M K I P+ TYT L+ +
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
+V EAK + M +G++P+V Y +L+DGY + ++ K + + M + P+ +Y
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
++I G + EA LL EM
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEM 776
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 170/359 (47%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F++M + P + FN V+ L Y A +M G++P+L+T +IL+
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+I A+ VL + K+G+ P+ I + LI G + +A++ D ++++G
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRI--------QG--------------------- 191
L +Y TLI G CK G+ A LL+ + QG
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 192 ------RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
R + P + T+I LCK S A +L+ + + KG + T +AL++G C
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+L +A + E+ + D +Y L+ + K+ EA L M+K+G+KPD T
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y+ L+ G +N+V +A ++ + G PDV++Y+++I+G CK + +E EM
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 152/310 (49%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
+P ++ F + + K A+ L +ME G+ P++VT N +I+ G+ + AF
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+++RG +P IT++ L+KGL +I A ++ +GF N + Y LI+
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
+ G + A+E+ + +G+ YNT+I CK+ +A L EM++ G + N
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
+++++I C A+ + EM L+N+ P T L+ L K GK +A +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
+ +G D T N+L+ G C ++++A + + RG D SYN +I+G C K
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 355 DEALNLLAEM 364
DEA L EM
Sbjct: 557 DEAFMFLDEM 566
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + M++ P + ++ ++ L AI + G+ P + T +++I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C + ++ + QP+T+ + LI+ C G++ AL+ +D+ +G
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N +Y +LI G+ + A L ++ G++P+V Y +ID K + L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
EM +K + PN +TY+ +I G+ G + +A LL+EM K I PD TY + K
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Query: 281 EGKVREA 287
+G V EA
Sbjct: 798 QGGVLEA 804
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+AI ++ + P ++ ++ ++ K + +M ++P+ V N LI
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
YC G+++ A + + +G P++ T+T+LIKG+ + +++ A +++ +G
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N Y LI+G KLG+ LLR + + + P+ + Y +I +D V+ A L
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 258
+EM KGI P+ +TY IYG+ G + +A DE
Sbjct: 773 LNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 156/289 (53%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
N +L L + A + ++ G V+ N LI+ C +++ AF L ++K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
RG +PD T++ LI GL K++ A+QF DD G L + +Y +I+G CK T
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
E + + ++P+ V+YN +I + C+ +S A +L +M KGISPN TY++LI
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP 301
G I+ ++++A L +EM ++ ++P+V+ YT L+D GK G++ + + +L M + V P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 302 DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
+ +TY ++ GY V +A + N M ++G PD +Y I G K
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 169/360 (46%), Gaps = 35/360 (9%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
GDA M + P + +N ++ S ++ + AI + M G+ + T N L
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFT--------------------------- 132
I YC GQ ++A +L +L G+ + +FT
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466
Query: 133 --------TLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALE 184
TLI GLC HGK +AL+ L +GF+++ + L++GLC+ G+ A
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 185 LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
+ + I GRG D V YNT+I C K + AF EMV +G+ P+ TYS LI G
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
+ ++++AI D+ + PDVYTY++++D K + E + M+ + V+P+ V
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN L+ YC ++ A ++ M +G +P+ +Y +I G+ I +EA L EM
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 160/323 (49%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ ML +P +++ L K +S A+ L Q G T N L++
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C G+++ AF + IL RG D +++ TLI G C K+ A F D+++ +G
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +Y LI GL + + A++ + G+ PDV Y+ +ID CK + + +
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM++K + PN V Y+ LI +C G+L A+ L ++M K I P+ TYT L+ +
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
+V EAK + M +G++P+V Y +L+DGY + ++ K + + M + P+ +Y
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
++I G + EA LL EM
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEM 776
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 170/359 (47%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F++M + P + FN V+ L Y A +M G++P+L+T +IL+
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+I A+ VL + K+G+ P+ I + LI G + +A++ D ++++G
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRI--------QG--------------------- 191
L +Y TLI G CK G+ A LL+ + QG
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 192 ------RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
R + P + T+I LCK S A +L+ + + KG + T +AL++G C
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+L +A + E+ + D +Y L+ + K+ EA L M+K+G+KPD T
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y+ L+ G +N+V +A ++ + G PDV++Y+++I+G CK + +E EM
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 152/310 (49%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
+P ++ F + + K A+ L +ME G+ P++VT N +I+ G+ + AF
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+++RG +P IT++ L+KGL +I A ++ +GF N + Y LI+
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
+ G + A+E+ + +G+ YNT+I CK+ +A L EM++ G + N
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
+++++I C A+ + EM L+N+ P T L+ L K GK +A +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
+ +G D T N+L+ G C ++++A + + RG D SYN +I+G C K
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 355 DEALNLLAEM 364
DEA L EM
Sbjct: 557 DEAFMFLDEM 566
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + M++ P + ++ ++ L AI + G+ P + T +++I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C + ++ + QP+T+ + LI+ C G++ AL+ +D+ +G
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N +Y +LI G+ + A L ++ G++P+V Y +ID K + L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
EM +K + PN +TY+ +I G+ G + +A LL+EM K I PD TY + K
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Query: 281 EGKVREA 287
+G V EA
Sbjct: 798 QGGVLEA 804
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+AI ++ + P ++ ++ ++ K + +M ++P+ V N LI
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
YC G+++ A + + +G P++ T+T+LIKG+ + +++ A +++ +G
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N Y LI+G KLG+ LLR + + + P+ + Y +I +D V+ A L
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 258
+EM KGI P+ +TY IYG+ G + +A DE
Sbjct: 773 LNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 157/285 (55%), Gaps = 1/285 (0%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
NKVL L + + LS ++ G P++VT LIN +C G+++ AF + + +
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLD-CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ 314
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
RG +PD I ++TLI G G + + L +G L+ V + + I+ K G+ +
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
A + +R+ +GI P+VV Y +I LC+D + AF +Y +++ +G+ P++VTYS+LI
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP 301
GFC G L+ L ++M PDV Y +LVD L K+G + A M+ Q ++
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 302 DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
+VV +NSL+DG+C +N ++A VF M G PDV ++ ++
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 178/359 (49%), Gaps = 41/359 (11%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ RML +P + + ++ L + A + Q+ G++PS+VT + LI+ +C
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G + S F++ ++K GY PD + + L+ GL G + A++F +L Q LN V
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII------DSLCK--------- 210
+ +LI+G C+L AL++ R + GIKPDV + T++ D+ CK
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 211 -------DKL-------------------VSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
+K+ + A ++ ++ + P++VTY+ +I G+C
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
+ +L +A + + + + P+ T TIL+ L K + A M ++M ++G KP+ V
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
TY LMD + ++ + +F M ++G +P + SY+III+GLCK DEA N+ +
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 167/304 (54%), Gaps = 4/304 (1%)
Query: 63 KVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN--ILINCYCHLGQINSAFSVLAGIL 120
++L SL+ + ++ GI+PS V+ + +L +C G++ A ++
Sbjct: 186 RMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVM 244
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+RG++ ++ ++KGL + +I+ A + VL G N V++ TLING CK GE
Sbjct: 245 ERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A +L + ++ RGI+PD++ Y+T+ID K ++ L+S+ + KG+ +VV +S+ I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
+ G L A + M + I P+V TYTIL+ L ++G++ EA M ++K+G++
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
P +VTY+SL+DG+C + ++ M + G PDV Y ++++GL K + A+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 361 LAEM 364
+M
Sbjct: 484 SVKM 487
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 167/364 (45%), Gaps = 41/364 (11%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A F M Q P + ++ ++ K L Q G+K +V + I+
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y G + +A V +L +G P+ +T+T LIKGLC G+I A + +L +G
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ V+Y +LI+G CK G + L + G PDVV+Y ++D L K L+ HA
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYT------ILV 275
+M+ + I NVV +++LI G+C + + +A+ + MG+ I PDV T+T I+
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 276 DALGKEGK-----------------------------------VREAKNMLAVMIKQGVK 300
DA K K + +A +I+ ++
Sbjct: 545 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 604
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
PD+VTYN+++ GYC + +++A+ +F + P+ + I+I+ LCK D A+ +
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 361 LAEM 364
+ M
Sbjct: 665 FSIM 668
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 146/333 (43%), Gaps = 41/333 (12%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ M++M P + + ++ L K A+ S +M I+ ++V N LI+ +C
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIK------GLCLHGK---------------- 143
L + + A V + G +PD TFTT+++ C H K
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKI 568
Query: 144 -------------------IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALE 184
I+ A +F ++++ + V+Y T+I G C L A
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 628
Query: 185 LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
+ ++ P+ V +I LCK+ + A ++S M KG PN VTY L+ F
Sbjct: 629 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 688
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
++ + L +EM K I P + +Y+I++D L K G+V EA N+ I + PDVV
Sbjct: 689 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 748
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
Y L+ GYC V + +A ++ M + G PD
Sbjct: 749 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 113/229 (49%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P + F+ M + + I N V+ L K A + + ++P +VT N
Sbjct: 553 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 612
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
+I YC L +++ A + + + P+T+T T LI LC + + A++ + +G
Sbjct: 613 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
N V+YG L++ K + + +L +Q +GI P +V Y+ IID LCK V A
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
+++ + + + P+VV Y+ LI G+C VG+L +A L + M + PD
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA FN +++ P I +N ++ + A + ++ T P+ VT+ ILI
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C ++ A + + + ++G +P+ +T+ L+ I+ + + +++ +G
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ VSY +I+GLCK G A + + + PDVV Y +I CK + A L
Sbjct: 710 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 769
Query: 221 YSEMVAKGISPNVVTYSAL 239
Y M+ G+ P+ + AL
Sbjct: 770 YEHMLRNGVKPDDLLQRAL 788
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 169/305 (55%), Gaps = 3/305 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTG-IKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
++ ++ +L K S A L ++M G P +VT ++N +C LG+++ A +L +
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
G++P+T+++T L+ G+C GK A + + + N ++Y +++GL + G+
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
S A +++R + +G P V N ++ SLC+D A E + KG + NVV ++ +
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I+GFC +L A+ +LD+M L N DV+TYT LVD LGK+G++ EA ++ M+ +G+
Sbjct: 601 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
P VTY +++ YC + +V+ + M R + + YN +I LC + +EA
Sbjct: 661 DPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADT 718
Query: 360 LLAEM 364
LL ++
Sbjct: 719 LLGKV 723
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 167/325 (51%), Gaps = 2/325 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ M + P + N + V+ A+ +M+ GI P++VT N +I
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ-GF 159
YC L ++ A +L + +G PD +++ T++ LC +I + + G
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ +QV+Y TLI+ L K AL L+ Q +G + D + Y+ I+ +LCK+ +S A D
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD 439
Query: 220 LYSEMVAKG-ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
L +EM++KG P+VVTY+A++ GFC +G++ +A LL M P+ +YT L++ +
Sbjct: 440 LINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
+ GK EA+ M+ + + P+ +TY+ +M G ++++A DV M +G P
Sbjct: 500 CRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP 559
Query: 339 HSYNIIINGLCKIKMADEALNLLAE 363
N+++ LC+ EA + E
Sbjct: 560 VEINLLLQSLCRDGRTHEARKFMEE 584
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 158/303 (52%), Gaps = 2/303 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ +L L KTK + + M+ GI + + ++ Y GQ+ A VL +
Sbjct: 210 YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQ 269
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G +P+ + T I ++++AL+F + + G + N V+Y +I G C L
Sbjct: 270 RAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVE 329
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK-GISPNVVTYSAL 239
A+ELL + +G PD V Y TI+ LCK+K + DL +M + G+ P+ VTY+ L
Sbjct: 330 EAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTL 389
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG- 298
I+ +A+ L + K D Y+ +V AL KEG++ EAK+++ M+ +G
Sbjct: 390 IHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGH 449
Query: 299 VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
PDVVTY ++++G+C + EV+KA+ + M G P+ SY ++NG+C+ + EA
Sbjct: 450 CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAR 509
Query: 359 NLL 361
++
Sbjct: 510 EMM 512
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 153/313 (48%), Gaps = 9/313 (2%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + +L + +T A + + E P+ +T +++++ G+++ A V
Sbjct: 487 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ ++ +G+ P + L++ LC G+ A +F ++ L +G +N V++ T+I+G C+
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
E AAL +L + DV Y T++D+L K ++ A +L +M+ KGI P VT
Sbjct: 607 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT 666
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y +I+ +C +G++ + +L++M + +Y I + L GK+ EA +L ++
Sbjct: 667 YRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVI--EKLCVLGKLEEADTLLGKVL 724
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH-----SYNIIINGLCK 350
+ + D T +LM+GY A V M R PDV S +++ G K
Sbjct: 725 RTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKG--K 782
Query: 351 IKMADEALNLLAE 363
+ AD+ + L E
Sbjct: 783 VDEADKLMLRLVE 795
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 121/245 (49%), Gaps = 37/245 (15%)
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+G ++ ++ + G+ AL++L +Q G++P++++ NT ID + +
Sbjct: 236 RGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEK 295
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A M GI PNVVTY+ +I G+C + ++++AI LL++M K PD +Y ++
Sbjct: 296 ALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMG 355
Query: 277 ALGKEGKVREAKNMLAVMIKQ-GVKPDVVTYNSLMD------------------------ 311
L KE ++ E ++++ M K+ G+ PD VTYN+L+
Sbjct: 356 YLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFR 415
Query: 312 ----GY-------CLVNEVNKAQDVFNAMSQRGET-PDVHSYNIIINGLCKIKMADEALN 359
GY C +++A+D+ N M +G PDV +Y ++NG C++ D+A
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKK 475
Query: 360 LLAEM 364
LL M
Sbjct: 476 LLQVM 480
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
+P ++ ++ L + S A + +M G P V +N+L+ C G+ + A
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ----VSYGTLI 170
+ L +G + + FTT+I G C + ++ AL DD+ +L+N+ +Y TL+
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM----YLINKHADVFTYTTLV 636
Query: 171 NGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS 230
+ L K G + A EL++++ +GI P V Y T+I C+ V + +M+++
Sbjct: 637 DTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC 696
Query: 231 PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNM 290
+ Y+ +I C++G+L++A LL ++ D T L++ K+G A +
Sbjct: 697 RTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKV 754
Query: 291 LAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
M + + PDV L L +V++A + + +RG
Sbjct: 755 ACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%)
Query: 195 KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIG 254
+ D ++Y ++++ L K KL + + M +GI +S ++ + GQL+ A+
Sbjct: 204 RHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 255 LLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC 314
+L M ++P++ +D + ++ +A L M G+ P+VVTYN ++ GYC
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 315 LVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ V +A ++ M +G PD SY I+ LCK K E +L+ +M
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 172/344 (50%), Gaps = 35/344 (10%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + +N ++ + VK + +S + M+ G+ + VT +L+ G+++ A +
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ +RG + D +T+LI C G ++RA D++ +G + +YG LI+G+CK
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV-- 233
+GE AA L+ +Q +G+ V++NT+ID C+ +V A +Y M KG +V
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 234 ---------------------------------VTYSALIYGFCIVGQLKQAIGLLDEMG 260
V+Y+ LI +C G +++A L EM
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 496
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN 320
K + P+ TY +++ A K+GK++EA+ + A M G+ PD TY SL+ G C+ + V+
Sbjct: 497 SKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVD 556
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+A +F+ M +G + +Y ++I+GL K +DEA L EM
Sbjct: 557 EAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 149/319 (46%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F RM+ ++ V+ L + + L + GIKP T N +IN Y
Sbjct: 212 FRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK 271
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
+ VL + K G + +T+T L++ +GK+ A + D++ +G +
Sbjct: 272 QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y +LI+ C+ G A L + +G+ P Y +ID +CK + A L +EM
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
+KG++ V ++ LI G+C G + +A + D M K DV+T + + +
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
EAK L M++ GVK V+Y +L+D YC V +A+ +F MS +G P+ +YN++I
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 346 NGLCKIKMADEALNLLAEM 364
CK EA L A M
Sbjct: 512 YAYCKQGKIKEARKLRANM 530
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 148/308 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA F+ M + + + +++ + + A L ++ G+ PS T LI
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C +G++ +A ++ + +G + F TLI G C G + A +D + +GF
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ + T+ + +L A + L R+ G+K V Y +ID CK+ V A L
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM +KG+ PN +TY+ +IY +C G++K+A L M +DPD YTYT L+
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
V EA + + M +G+ + VTY ++ G + ++A +++ M ++G T D
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Query: 341 YNIIINGL 348
Y +I +
Sbjct: 612 YTALIGSM 619
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 134/257 (52%)
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+I+ + ++ G + + T +++GLC G+++++ + + +G +Y
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
T+IN K + S +L+ ++ G+ + V Y +++ K+ +S A L+ EM +
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
GI +V Y++LI C G +K+A L DE+ K + P YTY L+D + K G++ A
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
+ ++ M +GV V +N+L+DGYC V++A +++ M Q+G DV + N I +
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443
Query: 348 LCKIKMADEALNLLAEM 364
++K DEA L M
Sbjct: 444 FNRLKRYDEAKQWLFRM 460
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%)
Query: 141 HGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVM 200
+G + L+ D ++ +G +++ S + K LE+ RR+ G+K V
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226
Query: 201 YNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
+++ LC+ V + L E KGI P TY+ +I + G+L M
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN 320
+ + TYT+L++ K GK+ +A+ + M ++G++ DV Y SL+ C +
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+A +F+ ++++G +P ++Y +I+G+CK+ A L+ EM
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 165/315 (52%), Gaps = 4/315 (1%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
+ P ++ +N +L S +K + L M GI P T N+LI C +++A
Sbjct: 108 NKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAR 167
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
+ + ++G +P+ TF L++G C G + L+ + + + G L N+V Y T+++
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGI---- 229
C+ G + +++ +++ G+ PD+V +N+ I +LCK+ V A ++S+M
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287
Query: 230 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKN 289
PN +TY+ ++ GFC VG L+ A L + + + + +Y I + L + GK EA+
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 290 MLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
+L M +G+ P + +YN LMDG C + ++ A+ + M + G PD +Y +++G C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 350 KIKMADEALNLLAEM 364
+ D A +LL EM
Sbjct: 408 SVGKVDAAKSLLQEM 422
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 168/346 (48%), Gaps = 27/346 (7%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
N M P +N +++S + + + +M G+ P +VT N I+ C
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 106 LGQINSAFSVLAGILKRGY----QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
G++ A + + + Y +P++IT+ ++KG C G ++ A + + L
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ SY + GL + G+ A +L+++ +GI P + YN ++D LCK ++S A +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
M G+ P+ VTY L++G+C VG++ A LL EM N P+ YT IL+ +L K
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET------ 335
G++ EA+ +L M ++G D VT N ++DG C E++KA ++ M G
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 336 -----------------PDVHSYNIIINGLCKIKMADEALNLLAEM 364
PD+ +Y+ ++NGLCK EA NL AEM
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 169/347 (48%), Gaps = 23/347 (6%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + F + + + +N L LV+ + A ++ QM GI PS+ + NIL+
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C LG ++ A +++ + + G PD +T+ L+ G C GK+ A +++ L
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL 428
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N + L++ L K+G S A ELLR++ +G D V N I+D LC + A ++
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Query: 221 YSEMVAKGIS-----------------------PNVVTYSALIYGFCIVGQLKQAIGLLD 257
M G + P+++TYS L+ G C G+ +A L
Sbjct: 489 VKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548
Query: 258 EMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN 317
EM + + PD Y I + K+GK+ A +L M K+G + TYNSL+ G + N
Sbjct: 549 EMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKN 608
Query: 318 EVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ + + + M ++G +P++ +YN I LC+ + ++A NLL EM
Sbjct: 609 QIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEM 655
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 165/344 (47%), Gaps = 59/344 (17%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P I+ +N ++ L K S A ++ M+ G+ P VT L++ YC +G++++A S+
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 116 LAGILK-----------------------------------RGYQPDTITFTTLIKGLCL 140
L +++ +GY DT+T ++ GLC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 141 HGKIQRALQF-----------------------HDDVLAQGFLLNQVSYGTLINGLCKLG 177
G++ +A++ D ++ L + ++Y TL+NGLCK G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
+ A L + G ++PD V YN I CK +S AF + +M KG ++ TY+
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
+LI G I Q+ + GL+DEM K I P++ TY + L + KV +A N+L M+++
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFN-AMSQRGETPDVHS 340
+ P+V ++ L++ +C V + + AQ+VF A+S G+ ++S
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYS 702
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 162/380 (42%), Gaps = 57/380 (15%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A S M++ P + N +L SL K S A L +M G VT NI+++
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 102 CYCHLGQINSAFSVLAGILKRGYQ-----------------------PDTITFTTLIKGL 138
C G+++ A ++ G+ G PD IT++TL+ GL
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 139 CLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDV 198
C G+ A +++ + + V+Y I+ CK G+ S+A +L+ ++ +G +
Sbjct: 535 CKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSL 594
Query: 199 VMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 258
YN++I L + L EM KGISPN+ TY+ I C +++ A LLDE
Sbjct: 595 ETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Query: 259 MGLKNIDPDVYTYTILVDALGK----------------------------------EGKV 284
M KNI P+V+++ L++A K G++
Sbjct: 655 MMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQL 714
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
+A +L ++ +G + Y L++ C +E+ A + + M RG D + +
Sbjct: 715 LKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPV 774
Query: 345 INGLCKIKMADEALNLLAEM 364
I+GL K+ EA + +M
Sbjct: 775 IDGLGKMGNKKEANSFADKM 794
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 152/344 (44%), Gaps = 23/344 (6%)
Query: 38 NPGDAISHFNRMLQMPS----------TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFT 87
NP A F R+ PS TP I LV+ K + L + + +
Sbjct: 15 NPRLAWRIFKRIFSSPSEESHGISLDATPTIARI------LVRAKMHEEIQELHNLILSS 68
Query: 88 GI-KPSLVTMNILINCYCHLGQINSAFSVLAGILKR--GYQPDTITFTTLIKGLCLHGKI 144
I K L ++ +++ + I+ AF + R +P + L++ ++
Sbjct: 69 SIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRV 128
Query: 145 QRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTI 204
+ + D++ G ++ LI LC AA EL + +G KP+ + +
Sbjct: 129 EFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGIL 188
Query: 205 IDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNI 264
+ CK L +L + M + G+ PN V Y+ ++ FC G+ + ++++M + +
Sbjct: 189 VRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL 248
Query: 265 DPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV----KPDVVTYNSLMDGYCLVNEVN 320
PD+ T+ + AL KEGKV +A + + M +P+ +TYN ++ G+C V +
Sbjct: 249 VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE 308
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
A+ +F ++ + + + SYNI + GL + EA +L +M
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 10/288 (3%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + ++ +L L K ++ A +L +M ++P V NI I+ +C G+I+SAF V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L + K+G T+ +LI GL + +I D++ +G N +Y T I LC+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS---PN 232
+ A LL + + I P+V + +I++ CK FD+ E+ +S
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK----VPDFDMAQEVFETAVSICGQK 697
Query: 233 VVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLA 292
YS + GQL +A LL+ + + + + Y LV++L K+ ++ A +L
Sbjct: 698 EGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILH 757
Query: 293 VMIKQGVKPDVVTYNSLMDGYCLV---NEVNKAQDVFNAMSQRGETPD 337
MI +G D ++DG + E N D M+ GE +
Sbjct: 758 KMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVAN 805
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 159/310 (51%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
+M + P I +N VL K + AI L M+ G+ + T N+LI+ C
Sbjct: 258 KMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSN 317
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+I + +L + KR P+ +T+ TLI G GK+ A Q +++L+ G N V++
Sbjct: 318 RIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFN 377
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
LI+G G AL++ ++ +G+ P V Y ++D LCK+ A Y M
Sbjct: 378 ALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN 437
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G+ +TY+ +I G C G L +A+ LL+EM IDPD+ TY+ L++ K G+ + A
Sbjct: 438 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 497
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
K ++ + + G+ P+ + Y++L+ C + + +A ++ AM G T D ++N+++
Sbjct: 498 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTS 557
Query: 348 LCKIKMADEA 357
LCK EA
Sbjct: 558 LCKAGKVAEA 567
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 161/311 (51%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D++ F M P ++ N +L S+VK+ + S +M I P + T NILI
Sbjct: 181 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILI 240
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G + ++ + K GY P +T+ T++ C G+ + A++ D + ++G
Sbjct: 241 NVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD 300
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +Y LI+ LC+ + LLR ++ R I P+ V YNT+I+ + V A L
Sbjct: 301 ADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQL 360
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+EM++ G+SPN VT++ALI G G K+A+ + M K + P +Y +L+D L K
Sbjct: 361 LNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 420
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ A+ M + GV +TY ++DG C +++A + N MS+ G PD+ +
Sbjct: 421 NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 480
Query: 341 YNIIINGLCKI 351
Y+ +ING CK+
Sbjct: 481 YSALINGFCKV 491
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 169/358 (47%), Gaps = 35/358 (9%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI + M + +N ++ L ++ + L M I P+ VT N LIN
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ + G++ A +L +L G P+ +TF LI G G + AL+ + A+G
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
++VSYG L++GLCK E A R++ G+ + Y +ID LCK+ + A L
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQ--------------------------------- 248
+EM GI P++VTYSALI GFC VG+
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 526
Query: 249 --LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
LK+AI + + M L+ D +T+ +LV +L K GKV EA+ + M G+ P+ V++
Sbjct: 527 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 586
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ L++GY E KA VF+ M++ G P +Y ++ GLCK EA L +
Sbjct: 587 DCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 144/281 (51%)
Query: 84 MEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK 143
M G PS+ T N ++ G+ S +S L +LKR PD TF LI LC G
Sbjct: 189 MGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGS 248
Query: 144 IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
+++ + G+ V+Y T+++ CK G AA+ELL ++ +G+ DV YN
Sbjct: 249 FEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNM 308
Query: 204 IIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN 263
+I LC+ ++ + L +M + I PN VTY+ LI GF G++ A LL+EM
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 368
Query: 264 IDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ 323
+ P+ T+ L+D EG +EA M +M +G+ P V+Y L+DG C E + A+
Sbjct: 369 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 428
Query: 324 DVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ M + G +Y +I+GLCK DEA+ LL EM
Sbjct: 429 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 158/321 (49%)
Query: 44 SHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCY 103
S ML+ P + FN ++ L + + L +ME +G P++VT N +++ Y
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 104 CHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ 163
C G+ +A +L + +G D T+ LI LC +I + D+ + N+
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 164 VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
V+Y TLING G+ A +LL + G+ P+ V +N +ID + A ++
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGK 283
M AKG++P+ V+Y L+ G C + A G M + TYT ++D L K G
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 284 VREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNI 343
+ EA +L M K G+ PD+VTY++L++G+C V A+++ + + G +P+ Y+
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 344 IINGLCKIKMADEALNLLAEM 364
+I C++ EA+ + M
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAM 539
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 155/340 (45%), Gaps = 35/340 (10%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
N ML +P FN ++ + ++ A+ + + ME G+ PS V+ +L++ C
Sbjct: 361 LNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 420
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
+ + A + + G IT+T +I GLC +G + A+ +++ G + V+
Sbjct: 421 NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 480
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII-------------------- 205
Y LING CK+G A E++ RI G+ P+ ++Y+T+I
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 206 ---------------DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLK 250
SLCK V+ A + M + GI PN V++ LI G+ G+
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600
Query: 251 QAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
+A + DEM P +TY L+ L K G +REA+ L + D V YN+L+
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Query: 311 DGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
C + KA +F M QR PD ++Y +I+GLC+
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 164/363 (45%), Gaps = 71/363 (19%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ ++ L K A+ L ++M GI P +VT + LIN +C +G+ +A ++ I
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G P+ I ++TLI C G ++ A++ ++ ++ +G + ++ L+ LCK G+ +
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A E +R + GI P+ V ++ +I+ AF ++ EM G P TY +L+
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 241 YGFCIVGQLKQA-----------------------------------IGLLDEMGLKNID 265
G C G L++A + L EM ++I
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 266 PDVYTYTILVDALGKEGK-------VREAK---NML---------------AVMIKQGV- 299
PD YTYT L+ L ++GK +EA+ N+L A K G+
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745
Query: 300 ----------KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
PD+VT N+++DGY + ++ K D+ M + P++ +YNI+++G
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805
Query: 350 KIK 352
K K
Sbjct: 806 KRK 808
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
+ILI Y G I + + + G+ P T ++ + G+ F ++L
Sbjct: 167 DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLK 226
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+ + ++ LIN LC G + L+++++ G P +V YNT++ CK
Sbjct: 227 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 286
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A +L M +KG+ +V TY+ LI+ C ++ + LL +M + I P+ TY L++
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
EGKV A +L M+ G+ P+ VT+N+L+DG+ +A +F M +G TP
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 337 DVHSYNIIINGLCKIKMADEALNLLAEM 364
SY ++++GLCK D A M
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 36/359 (10%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A S F+ M ++ P F + +L L K H A + V N L+
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C G + A S+ +++R PD+ T+T+LI GLC GK A+ F + A+G +L
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 162 -NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC----------- 209
N+V Y ++G+ K G+ A + ++ G PD+V N +ID
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 210 ------------------------KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
K K VS +F LY ++ GI P+ +T +L+ G C
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
L+ + +L + ++ D YT+ +L+ G++ A +++ VM G+ D T
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 901
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++++ + +++ V + MS++G +P+ Y +INGLC++ A + EM
Sbjct: 902 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 148/317 (46%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
+M + TP I N ++ + L +M P+L T NIL++ Y
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
++++F + I+ G PD +T +L+ G+C ++ L+ + +G +++ ++
Sbjct: 809 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
LI+ C GE + A +L++ + GI D + ++ L ++ + + EM +
Sbjct: 869 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 928
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
GISP Y LI G C VG +K A + +EM I P + +V AL K GK EA
Sbjct: 929 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
+L M+K + P + ++ +LM C V +A ++ MS G D+ SYN++I G
Sbjct: 989 TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITG 1048
Query: 348 LCKIKMADEALNLLAEM 364
LC A L EM
Sbjct: 1049 LCAKGDMALAFELYEEM 1065
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%)
Query: 131 FTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQ 190
+ LI+ G IQ +L+ + GF + + ++ + K GE + L+ +
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 191 GRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLK 250
R I PDV +N +I+ LC + + L +M G +P +VTY+ +++ +C G+ K
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 251 QAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
AI LLD M K +D DV TY +L+ L + ++ + +L M K+ + P+ VTYN+L+
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 311 DGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+G+ +V A + N M G +P+ ++N +I+G EAL + M
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + +N +L K K ST+ L + GI P +T + L+ C + +
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L + RG + D TF LI C +G+I A + + G L++ + +++ L +
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
+ +L + +GI P+ Y +I+ LC+ + AF + EM+A I P V
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
SA++ G+ +A LL M + P + ++T L+ K G V EA + VM
Sbjct: 972 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 1031
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
G+K D+V+YN L+ G C ++ A +++ M G + +Y +I GL
Sbjct: 1032 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N Y LI + G +LE+ R + G P V N I+ S+ K +
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM+ + I P+V T++ LI C G +++ L+ +M P + TY ++ K+
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
G+ + A +L M +GV DV TYN L+ C N + K + M +R P+ +Y
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 342 NIIINGLC---KIKMADEALN 359
N +ING K+ +A + LN
Sbjct: 342 NTLINGFSNEGKVLIASQLLN 362
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%)
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+Y+ +I ++ ++ + +++ M G +P+V T +A++ G+ L EM
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
+ I PDV T+ IL++ L EG ++ ++ M K G P +VTYN+++ YC
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 320 NKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
A ++ + M +G DV +YN++I+ LC+ + LL +M
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%)
Query: 230 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKN 289
+ N Y LI + G ++ ++ + MGL +P VYT ++ ++ K G+ +
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 290 MLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
L M+K+ + PDV T+N L++ C K+ + M + G P + +YN +++ C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 350 KIKMADEALNLLAEM 364
K A+ LL M
Sbjct: 280 KKGRFKAAIELLDHM 294
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
+P ++ ++ L + TA + +M I P V + ++ G+ + A
Sbjct: 931 SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 990
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+L +LK P +FTTL+ C +G + AL+ + G L+ VSY LI GLC
Sbjct: 991 LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1050
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDS-LCKDKLVSHAFDLYSEMVAKGI 229
G+ + A EL ++G G + Y +I L ++ S A + +++A+G
Sbjct: 1051 AKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1106
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 159/314 (50%)
Query: 51 QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQIN 110
+M +P +L LV+ + + + M G+ P + +L C G +
Sbjct: 157 EMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 111 SAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLI 170
+L + G +P+ +T I LC K++ A + + + G L N +Y +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 171 NGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS 230
+G CK G A L + I + P+VV++ T++D CK + + A L+ MV G+
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 231 PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNM 290
PN+ Y+ LI+G C G + +A+GLL EM N+ PDV+TYTIL++ L E +V EA +
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 291 LAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
M + + P TYNSL+ GYC + +A D+ + M+ G P++ +++ +I+G C
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 351 IKMADEALNLLAEM 364
++ A+ L EM
Sbjct: 457 VRDIKAAMGLYFEM 470
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 162/310 (52%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A F M + P ++ ++ ++ KT + A L ++ + P++V L+
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLV 311
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +C ++ +A S+ ++K G P+ + LI G C G + A+ ++ +
Sbjct: 312 DGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLS 371
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +Y LINGLC + + A L ++++ I P YN++I CK+ + A DL
Sbjct: 372 PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
SEM A G+ PN++T+S LI G+C V +K A+GL EM +K I PDV TYT L+DA K
Sbjct: 432 CSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
E ++EA + + M++ G+ P+ T+ L+DG+ ++ A D + +Q+ +
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVG 551
Query: 341 YNIIINGLCK 350
+ +I GLC+
Sbjct: 552 FTCLIEGLCQ 561
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 153/291 (52%)
Query: 74 YSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTT 133
YS L +M GIKP++ I I C ++ A + + K G P+ T++
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274
Query: 134 LIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
+I G C G +++A + ++L L N V +GTL++G CK E A L + G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
+ P++ +YN +I CK + A L SEM + +SP+V TY+ LI G CI Q+ +A
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394
Query: 254 GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY 313
L +M + I P TY L+ KE + +A ++ + M GV+P+++T+++L+DGY
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 314 CLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
C V ++ A ++ M+ +G PDV +Y +I+ K EAL L ++M
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM 505
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 158/327 (48%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A + +L P + F ++ K + TA SL M G+ P+L N
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI+ +C G + A +L+ + PD T+T LI GLC+ ++ A + + +
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ +Y +LI+G CK AL+L + G++P+++ ++T+ID C + + A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
LY EM KGI P+VVTY+ALI +K+A+ L +M I P+ +T+ LVD
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
KEG++ A + +Q + V + L++G C + +A F+ M G TPD
Sbjct: 524 FWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPD 583
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+ SY ++ G + K + + L +M
Sbjct: 584 ICSYVSMLKGHLQEKRITDTMMLQCDM 610
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 156/317 (49%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
+ M + P ++ + + L + A + M+ G+ P+L T + +I+ YC
Sbjct: 223 DEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKT 282
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
G + A+ + IL P+ + F TL+ G C ++ A ++ G N Y
Sbjct: 283 GNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVY 342
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
LI+G CK G A+ LL ++ + PDV Y +I+ LC + V+ A L+ +M
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
+ I P+ TY++LI+G+C ++QA+ L EM ++P++ T++ L+D ++
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
A + M +G+ PDVVTY +L+D + + +A +++ M + G P+ H++ +++
Sbjct: 463 AMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Query: 347 GLCKIKMADEALNLLAE 363
G K A++ E
Sbjct: 523 GFWKEGRLSVAIDFYQE 539
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 124/264 (46%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ + M + +P +F + ++ L + A L +M+ I PS T N LI
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ YC + A + + + G +P+ ITF+TLI G C I+ A+ + ++ +G +
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y LI+ K AL L + GI P+ + ++D K+ +S A D
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y E + N V ++ LI G C G + +A +M I PD+ +Y ++ +
Sbjct: 537 YQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQ 596
Query: 281 EGKVREAKNMLAVMIKQGVKPDVV 304
E ++ + + MIK G+ P+++
Sbjct: 597 EKRITDTMMLQCDMIKTGILPNLL 620
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 122/251 (48%), Gaps = 4/251 (1%)
Query: 41 DAISHFNRMLQMPSTPPIF----EFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTM 96
D ++ NR+ Q IF +N ++ K + A+ L +M +G++P+++T
Sbjct: 388 DQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITF 447
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
+ LI+ YC++ I +A + + +G PD +T+T LI ++ AL+ + D+L
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
G N ++ L++G K G S A++ + + + V + +I+ LC++ +
Sbjct: 508 AGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILR 567
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A +S+M + GI+P++ +Y +++ G ++ + L +M I P++ +L
Sbjct: 568 ASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLAR 627
Query: 277 ALGKEGKVREA 287
G V+ A
Sbjct: 628 FYQANGYVKSA 638
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P I F+ ++ + A+ L +M GI P +VT LI+ + + A +
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ +L+ G P+ TF L+ G G++ A+ F+ + Q N V + LI GLC+
Sbjct: 502 YSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G A ++ GI PD+ Y +++ ++K ++ L +M+ GI PN++
Sbjct: 562 NGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNI 264
L + G +K A L + LK +
Sbjct: 622 NQLLARFYQANGYVKSACFLTNSSRLKTV 650
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 176/324 (54%), Gaps = 3/324 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ FN M+ T + +N ++ L K K AI + +M TG +P+ T ++L+
Sbjct: 288 EAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL 347
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N GQ+ V+ + + Y I ++ L++ L G + A + D+ +
Sbjct: 348 NLLVAEGQLVRLDGVVE--ISKRYMTQGI-YSYLVRTLSKLGHVSEAHRLFCDMWSFPVK 404
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ SY +++ LC G+T A+E+L +I +G+ D +MYNT+ +L K K +SH DL
Sbjct: 405 GERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDL 464
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ +M G SP++ TY+ LI F VG++ +AI + +E+ + PD+ +Y L++ LGK
Sbjct: 465 FEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGK 524
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G V EA M ++G+ PDVVTY++LM+ + V A +F M +G P++ +
Sbjct: 525 NGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YNI+++ L K EA++L ++M
Sbjct: 585 YNILLDCLEKNGRTAEAVDLYSKM 608
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 143/309 (46%), Gaps = 37/309 (11%)
Query: 89 IKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL 148
+K + T L+ Y + AF V I + G++ D + L+ L K ++A
Sbjct: 199 LKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL---AKDEKAC 255
Query: 149 QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
Q +D+ + ++ +Y +I + ++G+ A+ L + G+ +VV YNT++ L
Sbjct: 256 QVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVL 315
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
K K+V A ++S MV G PN TYS L+ GQL + G++ E+ + + +
Sbjct: 316 AKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGI 374
Query: 269 YTYTI---------------------------------LVDALGKEGKVREAKNMLAVMI 295
Y+Y + ++++L GK EA ML+ +
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
++GV D + YN++ + +++ D+F M + G +PD+ +YNI+I ++ D
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494
Query: 356 EALNLLAEM 364
EA+N+ E+
Sbjct: 495 EAINIFEEL 503
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 95/179 (53%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N V ++L K K S L +M+ G P + T NILI + +G+++ A ++ +
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ +PD I++ +LI L +G + A ++ +G + V+Y TL+ K
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A L + +G +P++V YN ++D L K+ + A DLYS+M +G++P+ +TY+ L
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G T LR ++ +K + Y ++ + + + S AFD+Y E+ G ++
Sbjct: 181 FGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFA 240
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+ L+ + + ++A + ++M ++ D YTYTI++ +G+ GK EA + MI
Sbjct: 241 YNMLLDA---LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMI 297
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+G+ +VV YN+LM V+KA VF+ M + G P+ ++Y++++N L
Sbjct: 298 TEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLL 350
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 172/342 (50%), Gaps = 35/342 (10%)
Query: 58 IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLA 117
++ N ++ +L K + Q++ G+ P +VT N LI+ Y G + AF ++
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+ +G+ P T+ T+I GLC HGK +RA + ++L G + +Y +L+ CK G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 178 ET----------------------SAALELLRR-------------IQGRGIKPDVVMYN 202
+ S+ + L R ++ G+ PD V+Y
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 203 TIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLK 262
+I C+ ++S A +L +EM+ +G + +VVTY+ +++G C L +A L +EM +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 263 NIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKA 322
+ PD YT TIL+D K G ++ A + M ++ ++ DVVTYN+L+DG+ V +++ A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 323 QDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++++ M + P SY+I++N LC EA + EM
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 168/321 (52%), Gaps = 2/321 (0%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F+ M P + F+ +++ ++ + A+ + ++ G+ P V ILI YC
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G I+ A ++ +L++G D +T+ T++ GLC + A + +++ + + +
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
LI+G CKLG A+EL ++++ + I+ DVV YNT++D K + A +++++MV
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
+K I P ++YS L+ C G L +A + DEM KNI P V ++ + G
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM--SQRGETPDVHSYNI 343
+ ++ L MI +G PD ++YN+L+ G+ ++KA + M Q G PDV +YN
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 344 IINGLCKIKMADEALNLLAEM 364
I++G C+ EA +L +M
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKM 683
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 162/303 (53%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
N ++ SLV+ A + ++ +G+ ++ T+NI++N C G++ + L+ + +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
+G PD +T+ TLI G ++ A + + + +GF +Y T+INGLCK G+
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
A E+ + G+ PD Y +++ CK V ++S+M ++ + P++V +S+++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP 301
F G L +A+ + + + PD YTIL+ ++G + A N+ M++QG
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 302 DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
DVVTYN+++ G C + +A +FN M++R PD ++ I+I+G CK+ A+ L
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 362 AEM 364
+M
Sbjct: 504 QKM 506
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 158/322 (49%), Gaps = 3/322 (0%)
Query: 46 FNRMLQMPS---TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINC 102
F M MP +P ++ +N V+ L K Y A + +M +G+ P T L+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 103 YCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLN 162
C G + V + + R PD + F++++ G + +AL + + V G + +
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 163 QVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYS 222
V Y LI G C+ G S A+ L + +G DVV YNTI+ LCK K++ A L++
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 223 EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
EM + + P+ T + LI G C +G L+ A+ L +M K I DV TY L+D GK G
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 283 KVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN 342
+ AK + A M+ + + P ++Y+ L++ C + +A V++ M + P V N
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 343 IIINGLCKIKMADEALNLLAEM 364
+I G C+ A + + L +M
Sbjct: 590 SMIKGYCRSGNASDGESFLEKM 611
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 158/298 (53%), Gaps = 2/298 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A++ N MLQ + +N +L L K K A L ++M + P T+ ILI+
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+C LG + +A + + ++ + D +T+ TL+ G G I A + D++++ L
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+SY L+N LC G + A + + + IKP V++ N++I C+ S
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN--IDPDVYTYTILVDALG 279
+M+++G P+ ++Y+ LIYGF + +A GL+ +M + + PDV+TY ++
Sbjct: 609 EKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC 668
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
++ +++EA+ +L MI++GV PD TY +++G+ + + +A + + M QRG +PD
Sbjct: 669 RQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 165/329 (50%), Gaps = 2/329 (0%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A+ +FN + + P + ++ + S A++L ++M G +VT N
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+++ C + A + + +R PD+ T T LI G C G +Q A++ + +
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
L+ V+Y TL++G K+G+ A E+ + + I P + Y+ ++++LC ++ A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
F ++ EM++K I P V+ +++I G+C G L++M + PD +Y L+
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 278 LGKEGKVREAKNMLAVMIKQ--GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
+E + +A ++ M ++ G+ PDV TYNS++ G+C N++ +A+ V M +RG
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
PD +Y +ING EA + EM
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 150/304 (49%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
F+ ++ + V+ + A + G S+ N LI +G + A+ V I
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G + T ++ LC GK+++ F V +G + V+Y TLI+ G
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A EL+ + G+G P V YNT+I+ LCK A ++++EM+ G+SP+ TY +L+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
C G + + + +M +++ PD+ ++ ++ + G + +A + + G+
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
PD V Y L+ GYC ++ A ++ N M Q+G DV +YN I++GLCK KM EA L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 361 LAEM 364
EM
Sbjct: 468 FNEM 471
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 138/265 (52%), Gaps = 2/265 (0%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G+A FN M + P + ++ K + A+ L +M+ I+ +VT N L
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
++ + +G I++A + A ++ + P I+++ L+ LC G + A + D+++++
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ ++I G C+ G S L ++ G PD + YNT+I +++ +S AF
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 220 LYSEMVAK--GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L +M + G+ P+V TY+++++GFC Q+K+A +L +M + ++PD TYT +++
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPD 302
+ + EA + M+++G PD
Sbjct: 702 FVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 120/223 (53%), Gaps = 17/223 (7%)
Query: 159 FLLNQVSYGTLINGLCKLGETSAALE-LLRRIQGRGI-KPDVV---------------MY 201
F +S +I+ L + G S A LLR I+ G+ + ++V ++
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 202 NTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL 261
+ +I + + + + A + ++ + +KG + ++ +ALI +G ++ A G+ E+
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 262 KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
+ +VYT I+V+AL K+GK+ + L+ + ++GV PD+VTYN+L+ Y + +
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 322 AQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
A ++ NAM +G +P V++YN +INGLCK + A + AEM
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 173/328 (52%), Gaps = 5/328 (1%)
Query: 41 DAISHFNRML-QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
DA+ RM+ + P +N +L ++ K S L M+ G+ P+ VT N L
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ YC LG + AF ++ + + PD T+ LI GLC G ++ L+ D + +
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ V+Y TLI+G +LG + A +L+ +++ G+K + V +N + LCK++
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTR 401
Query: 220 LYSEMV-AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
E+V G SP++VTY LI + VG L A+ ++ EMG K I + T ++DAL
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
KE K+ EA N+L K+G D VTY +L+ G+ +V KA ++++ M + TP V
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521
Query: 339 HSYNIIINGLC---KIKMADEALNLLAE 363
++N +I GLC K ++A E + LAE
Sbjct: 522 STFNSLIGGLCHHGKTELAMEKFDELAE 549
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 159/342 (46%), Gaps = 36/342 (10%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P +N ++ K A + M+ T + P L T NILIN C+ G + +
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 116 LAGILKRGYQPDTITFTTLIKG-----LCLHGKIQRALQFHDDVLA-------------- 156
+ + QPD +T+ TLI G L L + +D V A
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Query: 157 -----------------QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVV 199
GF + V+Y TLI K+G+ S ALE++R + +GIK + +
Sbjct: 393 EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
NTI+D+LCK++ + A +L + +G + VTY LI GF ++++A+ + DEM
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
I P V T+ L+ L GK A + + G+ PD T+NS++ GYC V
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 320 NKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
KA + +N + PD ++ NI++NGLCK M ++ALN
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF 614
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 148/274 (54%), Gaps = 4/274 (1%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
G P +VT + LI Y +G ++ A ++ + ++G + +TIT T++ LC K+ A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
+ +GF++++V+YGTLI G + + ALE+ ++ I P V +N++I
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
LC A + + E+ G+ P+ T++++I G+C G++++A +E + PD
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
YT IL++ L KEG +A N +I++ + D VTYN+++ +C ++ +A D+ +
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLS 649
Query: 328 AMSQRGETPDVHSYNIIINGLC---KIKMADEAL 358
M ++G PD +YN I+ L K+ DE L
Sbjct: 650 EMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 155/293 (52%), Gaps = 6/293 (2%)
Query: 64 VLTSLVKTKHYSTAI--SLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
+L S ++T S ++ SL H PS +I ++ Y H G+ + A + +++
Sbjct: 100 LLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIR 159
Query: 122 RGYQPDTITFTTLIKGLCLHGK---IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
+P+ +T TL+ GL + I A + DD++ G LN ++ L+NG C G+
Sbjct: 160 LKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK 219
Query: 179 TSAALELLRRIQGR-GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
AL +L R+ + PD V YNTI+ ++ K +S +L +M G+ PN VTY+
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYN 279
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
L+YG+C +G LK+A +++ M N+ PD+ TY IL++ L G +RE ++ M
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL 339
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
++PDVVTYN+L+DG + +A+ + M G + ++NI + LCK
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 152/310 (49%), Gaps = 2/310 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + +N ++ + A L QME G+K + VT NI + C + +
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK 402
Query: 116 LAGILK-RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ ++ G+ PD +T+ TLIK G + AL+ ++ +G +N ++ T+++ LC
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
K + A LL RG D V Y T+I +++ V A +++ EM I+P V
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS 522
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
T+++LI G C G+ + A+ DE+ + PD T+ ++ KEG+V +A
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNES 582
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
IK KPD T N L++G C KA + FN + + E D +YN +I+ CK K
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKL 641
Query: 355 DEALNLLAEM 364
EA +LL+EM
Sbjct: 642 KEAYDLLSEM 651
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 140/256 (54%), Gaps = 1/256 (0%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
+P I ++ ++ + +K S A+ + +M GIK + +T+N +++ C +++ A +
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+L KRG+ D +T+ TLI G K+++AL+ D++ ++ +LI GLC
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
G+T A+E + G+ PD +N+II CK+ V AF+ Y+E + P+
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNY 592
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
T + L+ G C G ++A+ + + ++ + D TY ++ A K+ K++EA ++L+ M
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651
Query: 295 IKQGVKPDVVTYNSLM 310
++G++PD TYNS +
Sbjct: 652 EEKGLEPDRFTYNSFI 667
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 175/369 (47%), Gaps = 46/369 (12%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEF------TGIKPS 92
P A+ F +M+++ P + N +L LV+ Y ++ S+S E G+ +
Sbjct: 147 PHVALQIFQKMIRLKLKPNLLTCNTLLIGLVR---YPSSFSISSAREVFDDMVKIGVSLN 203
Query: 93 LVTMNILINCYCHLGQINSAFSVLAGILKR-GYQPDTITFTTLIKGLCLHGKIQRALQFH 151
+ T N+L+N YC G++ A +L ++ PD +T+ T++K + G++ +
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
D+ G + N+V+Y L+ G CKLG A +++ ++ + PD+ YN +I+ LC
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM---GLK------ 262
+ +L M + + P+VVTY+ LI G +G +A L+++M G+K
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 263 ---------------------------NIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
PD+ TY L+ A K G + A M+ M
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
++G+K + +T N+++D C ++++A ++ N+ +RG D +Y +I G + + +
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 356 EALNLLAEM 364
+AL + EM
Sbjct: 504 KALEMWDEM 512
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 123/255 (48%), Gaps = 15/255 (5%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ ++ + + A+ + +M+ I P++ T N LI CH G+ A +
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G PD TF ++I G C G++++A +F+++ + F + + L+NGLCK G T
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 181 AALELLRR-IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
AL I+ R + D V YNT+I + CKDK + A+DL SEM KG+ P+ TY++
Sbjct: 609 KALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I G+L + LL + K ++ ++ +V KN K+ +
Sbjct: 667 ISLLMEDGKLSETDELLKKFSGK------------FGSMKRDLQVETEKNPATSESKEEL 714
Query: 300 KPDVVTYNSLMDGYC 314
+ + Y+ ++D C
Sbjct: 715 NTEAIAYSDVIDELC 729
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 24/233 (10%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ ++ M ++ TP + FN ++ L A+ ++ +G+ P T N +I
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
YC G++ AF +K ++PD T L+ GLC G ++AL F + ++ + +
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EV 623
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ V+Y T+I+ CK + A +LL ++ +G++PD YN+ I L +D +S +L
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Query: 222 SEMVAK-----------------------GISPNVVTYSALIYGFCIVGQLKQ 251
+ K ++ + YS +I C G+LK+
Sbjct: 684 KKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 171/360 (47%), Gaps = 35/360 (9%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G + FNRM P +F +N ++ L K K + A L +M + PSL+T N L
Sbjct: 196 GKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHG----------------- 142
I+ YC G +F V + +P ITF TL+KGL G
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
Query: 143 ------------------KIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALE 184
K + AL ++ + G +N + L+N LCK G+ A E
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 185 LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
+L R +G+ P+ V+YNT+ID C+ + A M +G+ P+ + Y+ LI FC
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
+G+++ A +++M LK + P V TY IL+ G++ + + ++L M G P+VV
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+Y +L++ C +++ +AQ V M RG +P V YN++I+G C ++A EM
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 154/312 (49%), Gaps = 4/312 (1%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A N+M +P + +N ++ + + + +ME G P++V+ LI
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
NC C ++ A V + RG P + LI G C GKI+ A +F ++L +G
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
LN V+Y TLI+GL G+ S A +LL I +G+KPDV YN++I V L
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y EM GI P + TY LI C ++ L EM LK PD+ Y ++
Sbjct: 622 YEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLK---PDLLVYNGVLHCYAV 677
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G + +A N+ MI++ + D TYNSL+ G V ++ + + + + M+ R P+ +
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADT 737
Query: 341 YNIIINGLCKIK 352
YNII+ G C++K
Sbjct: 738 YNIIVKGHCEVK 749
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 157/307 (51%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + M + P F F+ + + A+ + +G+K + T +IL+
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C G+I A +L + +G P+ + + T+I G C G + A + + QG
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK 421
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ ++Y LI C+LGE A + + +++ +G+ P V YN +I + FD+
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDI 481
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
EM G PNVV+Y LI C +L +A + +M + + P V Y +L+D
Sbjct: 482 LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCS 541
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+GK+ +A M+K+G++ ++VTYN+L+DG + ++++A+D+ +S++G PDV +
Sbjct: 542 KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFT 601
Query: 341 YNIIING 347
YN +I+G
Sbjct: 602 YNSLISG 608
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 158/322 (49%)
Query: 43 ISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINC 102
I+ F +L+ P F + K + + VK + L ++M+ I PS+ N+LI+
Sbjct: 164 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDG 223
Query: 103 YCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLN 162
C ++N A + +L R P IT+ TLI G C G +++ + + + A +
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 163 QVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYS 222
+++ TL+ GL K G A +L+ ++ G PD ++ + D ++ A +Y
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE 343
Query: 223 EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
V G+ N T S L+ C G++++A +L K + P+ Y ++D ++G
Sbjct: 344 TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKG 403
Query: 283 KVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN 342
+ A+ + M KQG+KPD + YN L+ +C + E+ A+ N M +G +P V +YN
Sbjct: 404 DLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYN 463
Query: 343 IIINGLCKIKMADEALNLLAEM 364
I+I G + D+ ++L EM
Sbjct: 464 ILIGGYGRKYEFDKCFDILKEM 485
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 148/288 (51%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
+L LVKTK + I++ + + +PS I L + + +
Sbjct: 150 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 209
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
P + LI GLC ++ A Q D++LA+ L + ++Y TLI+G CK G +
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
++ R++ I+P ++ +NT++ L K +V A ++ EM G P+ T+S L G+
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
+ + A+G+ + + + YT +IL++AL KEGK+ +A+ +L + +G+ P+
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
V YN+++DGYC ++ A+ AM ++G PD +YN +I C++
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 150/304 (49%), Gaps = 12/304 (3%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSL------VTMNILINCYCHLGQINSAFSVLA 117
VL+SL+++ A F+ PSL + +++L+N I+ A +
Sbjct: 77 VLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLN---ESKMISEAADLFF 133
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+ G P + + T L+ L + + + ++L F ++ YG I KL
Sbjct: 134 ALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLS 193
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
+ LEL R++ I P V +YN +ID LCK K ++ A L+ EM+A+ + P+++TY+
Sbjct: 194 DVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYN 253
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
LI G+C G +++ + + M +I+P + T+ L+ L K G V +A+N+L M
Sbjct: 254 TLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC---KIKMA 354
G PD T++ L DGY + A V+ G + ++ +I++N LC KI+ A
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 355 DEAL 358
+E L
Sbjct: 374 EEIL 377
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
S A +L ++ GI P ++D L K K +++ ++ P+ Y
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I + + + + L + M I P V+ Y +L+D L K ++ +A+ + M+ + +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
P ++TYN+L+DGYC K+ V M P + ++N ++ GL K M ++A N
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 360 LLAEM 364
+L EM
Sbjct: 306 VLKEM 310
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%)
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+G + S L++ L K + + + I +P MY I + K V
Sbjct: 138 EGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK 197
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
+L++ M I P+V Y+ LI G C ++ A L DEM + + P + TY L+D
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
K G ++ + M ++P ++T+N+L+ G V A++V M G P
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 337 DVHSYNIIINGLCKIKMADEALNL 360
D +++I+ +G + A+ AL +
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGV 341
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%)
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
L + K++S A DL+ + +GI P+ + + L+ Q + I + + + P
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
+ Y + A K V + + M + P V YN L+DG C +N A+ +F+
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 328 AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M R P + +YN +I+G CK +++ + M
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 162/320 (50%), Gaps = 4/320 (1%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
R L P + +N ++ L K Y A L +M GI P++++ + LIN C+ G
Sbjct: 236 RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL--NQVS 165
QI AFS L +LKRG P+ T ++L+KG L G AL + ++ +GF L N V+
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQPNVVA 354
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y TL+ G C G A+ + ++ G P++ Y ++I+ K + A ++++M+
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
G PNVV Y+ ++ C + K+A L++ M +N P V T+ + L G++
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 474
Query: 286 EAKNMLAVMIKQ-GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
A+ + M +Q P++VTYN L+DG N + +A + + RG +YN +
Sbjct: 475 WAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTL 534
Query: 345 INGLCKIKMADEALNLLAEM 364
++G C + AL L+ +M
Sbjct: 535 LHGSCNAGLPGIALQLVGKM 554
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 163/311 (52%), Gaps = 7/311 (2%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + V++S+ + L+ + E P + N LIN C AF +
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFEL 268
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ ++++G P+ I+++TLI LC G+I+ A F +L +G N + +L+ G
Sbjct: 269 MREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328
Query: 176 LGETSAALELLRR-IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
G T AL+L + I+G G++P+VV YNT++ C + A ++S M G SPN+
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
TY +LI GF G L A+ + ++M P+V YT +V+AL + K +EA++++ +M
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET-PDVHSYNIIINGLCKIKM 353
K+ P V T+N+ + G C ++ A+ VF M Q+ P++ +YN +++GL K
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Query: 354 ADEALNLLAEM 364
+EA L E+
Sbjct: 509 IEEAYGLTREI 519
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 166/359 (46%), Gaps = 41/359 (11%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ F R+ + P + +N VL +L+ + M+ G +P++ T N+L+
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C +++ A +L + +G PD +++TT+I +C G ++ + LA+ F
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEP 244
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF--- 218
Y LINGLCK + A EL+R + +GI P+V+ Y+T+I+ LC + AF
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 219 --------------------------------DLYSEMVAK-GISPNVVTYSALIYGFCI 245
DL+++M+ G+ PNVV Y+ L+ GFC
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G + +A+ + M P++ TY L++ K G + A + M+ G P+VV
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y ++++ C ++ +A+ + MS+ P V ++N I GLC D A + +M
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 154/341 (45%), Gaps = 33/341 (9%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP FE ++ L + L QM+ G S +I+ Y +G A
Sbjct: 75 TPLTFEV--MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVE 132
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ I + G P + ++ L +IQ + D+ GF N +Y L+ LC
Sbjct: 133 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 192
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH------------------ 216
K + A +LL + +G PD V Y T+I S+C+ LV
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNAL 252
Query: 217 ------------AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNI 264
AF+L EMV KGISPNV++YS LI C GQ++ A L +M +
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 265 DPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ-GVKPDVVTYNSLMDGYCLVNEVNKAQ 323
P++YT + LV G +A ++ MI+ G++P+VV YN+L+ G+C + KA
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 324 DVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
VF+ M + G +P++ +Y +ING K D A+ + +M
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 151/310 (48%), Gaps = 4/310 (1%)
Query: 41 DAISHFNRMLQ-MPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
DA+ +N+M++ P + +N ++ + A+S+ ME G P++ T L
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
IN + G ++ A + +L G P+ + +T +++ LC H K + A + + +
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRI-QGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
+ ++ I GLC G A ++ R++ Q P++V YN ++D L K + A+
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
L E+ +G+ + TY+ L++G C G A+ L+ +M + PD T +++ A
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 279 GKEGKVREAKNMLAVMI--KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
K+GK A ML ++ ++ +PDV++Y +++ G C N + M G P
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 337 DVHSYNIIIN 346
+ +++++IN
Sbjct: 634 SIATWSVLIN 643
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 138/288 (47%), Gaps = 4/288 (1%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+S F+ M ++ +P I + ++ K A+ + ++M +G P++V ++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C + A S++ + K P TF IKGLC G++ A + + Q
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 162 -NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y L++GL K A L R I RG++ YNT++ C L A L
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD--EMGLKNIDPDVYTYTILVDAL 278
+M+ G SP+ +T + +I +C G+ ++A +LD G + PDV +YT ++ L
Sbjct: 551 VGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGL 610
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
+ + +L MI G+ P + T++ L++ + +++++ +A D F
Sbjct: 611 CRSNCREDGVILLERMISAGIVPSIATWSVLINCF-ILDDIVRAHDQF 657
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 164/346 (47%), Gaps = 22/346 (6%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ NRM P + ++ +L + K + + M G PS N L+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK------IQRALQFHDDV 154
+ YC G + A+ +L ++K G+ P + + LI +C + A + + ++
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
LA G +LN+++ + LC G+ A ++R + G+G PD Y+ +++ LC +
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
AF L+ EM G+ +V TY+ ++ FC G ++QA +EM P+V TYT L
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+ A K KV A + M+ +G P++VTY++L+DG+C +V KA +F M +
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619
Query: 335 TPDVH----------------SYNIIINGLCKIKMADEALNLLAEM 364
PDV +Y +++G CK +EA LL M
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 154/323 (47%), Gaps = 19/323 (5%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A S M+ P ++KVL L A L +M+ G+ + T I+++
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+C G I A + + G P+ +T+T LI K+ A + + +L++G L
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N V+Y LI+G CK G+ A ++ R+ G PDV MY F Y
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY----------------FKQY 630
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
+ + PNVVTY AL+ GFC ++++A LLD M ++ +P+ Y L+D L K
Sbjct: 631 DDNSER---PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GK+ EA+ + M + G + TY+SL+D Y V + A V + M + P+V Y
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
+I+GLCK+ DEA L+ M
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMM 770
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 171/374 (45%), Gaps = 53/374 (14%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A FN M ++ TP + + ++ + +K K S A L M G P++VT + LI+
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 102 CYCHLGQINSA---FSVLAG--------ILKRGY-----QPDTITFTTLIKGLCLHGKIQ 145
+C GQ+ A F + G + + Y +P+ +T+ L+ G C +++
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 146 RALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGI----------- 194
A + D + +G NQ+ Y LI+GLCK+G+ A E+ + G
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 195 ------------------------KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS 230
P+VV+Y +ID LCK A+ L M KG
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 231 PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNM 290
PNVVTY+A+I GF ++G+++ + LL+ MG K + P+ TY +L+D K G + A N+
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 291 LAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
L M + Y +++G+ E ++ + + + Q P + Y ++I+ L K
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK 894
Query: 351 IKMADEALNLLAEM 364
+ + AL LL E+
Sbjct: 895 AQRLEMALRLLEEV 908
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 151/303 (49%), Gaps = 4/303 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
++ ++ L K A + +M G +L T + LI+ Y + + + A VL+ +L
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ P+ + +T +I GLC GK A + + +G N V+Y +I+G +G+
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
LELL R+ +G+ P+ V Y +ID CK+ + A +L EM + Y +I
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNML--AVMIKQG 298
GF + +++GLLDE+G + P + Y +L+D L K ++ A +L
Sbjct: 857 EGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 299 VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
+ TYNSL++ CL N+V A +F+ M+++G P++ S+ +I GL + EAL
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Query: 359 NLL 361
LL
Sbjct: 975 LLL 977
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 164/399 (41%), Gaps = 79/399 (19%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ R+ P +N ++ + +K +A + +M ++ T+
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C +G+ A +++ + PDT+ +T LI GLC + A+ F + + A L
Sbjct: 279 SLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 162 NQVSYGTLINGL-----------------------------------CKLGETSAALELL 186
N V+Y TL+ G C G+ S A +LL
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDK---------------------------------- 212
+++ G P V+YN +I S+C DK
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 213 --LVS-----HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
L S AF + EM+ +G P+ TYS ++ C +++ A L +EM +
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
DVYTYTI+VD+ K G + +A+ M + G P+VVTY +L+ Y +V+ A ++
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 326 FNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
F M G P++ +Y+ +I+G CK ++A + M
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 121/310 (39%), Gaps = 44/310 (14%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
+N+L+ +C G + A L + ++P T+ LI+ ++ A H ++
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
++ + LCK+G+ AL L ++ PD V Y +I LC+ L
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFE 319
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A D + M A PNVVTYS L+ G QL + +L+ M ++ P + LV
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC--------------------- 314
A G A +L M+K G P V YN L+ C
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 315 -----LVNEVN---------------KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
++N++N KA V M +G PD +Y+ ++N LC
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 355 DEALNLLAEM 364
+ A L EM
Sbjct: 500 ELAFLLFEEM 509
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
++ML+ P + + +++ L K A L ME G +P++VT +I+ + +
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
G+I + +L + +G P+ +T+ LI C +G + A +++ + + Y
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 852
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
+I G K E +L LL I P + +Y +ID+L K + + A L E+
Sbjct: 853 RKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 227 KGISPNVV----TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
S +V TY++LI C+ +++ A L EM K + P++ ++ L+ L +
Sbjct: 911 --FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Query: 283 KVREA 287
K+ EA
Sbjct: 969 KISEA 973
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 152/296 (51%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P I FN ++ S K + L +M+ GIKPSL++ NI++ C G++ A +
Sbjct: 571 PDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 630
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L ++ P+ T+ + H + + H+ +L+ G L++ Y TLI LCK
Sbjct: 631 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
LG T A ++ ++ RG PD V +N+++ V A YS M+ GISPNV T
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVAT 750
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+ +I G G +K+ L EM + + PD +TY L+ K G ++ + + MI
Sbjct: 751 YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI 810
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
G+ P TYN L+ + V ++ +A+++ M +RG +P+ +Y +I+GLCK+
Sbjct: 811 ADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 172/347 (49%), Gaps = 31/347 (8%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+++M+ +P +F N ++ S K S AISL + I VT N +I+ C
Sbjct: 117 YSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCE 173
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHD------------- 152
G + A+ L+ ++K G PDT+++ TLI G C G RA D
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTIL 233
Query: 153 ---------------DVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPD 197
D++ GF + V++ ++IN LCK G+ LLR ++ + P+
Sbjct: 234 LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPN 293
Query: 198 VVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 257
V Y T++DSL K + HA LYS+MV +GI ++V Y+ L+ G G L++A
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 258 EMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN 317
+ N P+V TYT LVD L K G + A+ ++ M+++ V P+VVTY+S+++GY
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKG 413
Query: 318 EVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ +A + M + P+ +Y +I+GL K + A+ L EM
Sbjct: 414 MLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 166/331 (50%), Gaps = 37/331 (11%)
Query: 58 IFEFNKVLTSLVKTKHYST-AISLSHQ-MEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
I E N + +++ + +Y+ AI +++ M +G P +VT + +IN C G++ +
Sbjct: 222 ISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L + + P+ +T+TTL+ L + AL + ++ +G ++ V Y L++GL K
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G+ A + + + P+VV Y ++D LCK +S A + ++M+ K + PNVVT
Sbjct: 342 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVT 401
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL---GKE----------- 281
YS++I G+ G L++A+ LL +M +N+ P+ +TY ++D L GKE
Sbjct: 402 YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR 461
Query: 282 ---------------------GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN 320
G+++E K ++ M+ +GV D + Y SL+D + +
Sbjct: 462 LIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEE 521
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
A M +RG DV SYN++I+G+ K
Sbjct: 522 AALAWAEEMQERGMPWDVVSYNVLISGMLKF 552
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 2/241 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFT-GIKPSLVTMNIL 99
+AI N+M+ M P + + L + K K + AI +H+ + GIK S N L
Sbjct: 626 EAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR-ADAIFKTHETLLSYGIKLSRQVYNTL 684
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I C LG A V+ + RG+ PDT+TF +L+ G + +++AL + ++ G
Sbjct: 685 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 744
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N +Y T+I GL G + L ++ RG++PD YN +I K + +
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 804
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+Y EM+A G+ P TY+ LI F VG++ QA LL EMG + + P+ TY ++ L
Sbjct: 805 IYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Query: 280 K 280
K
Sbjct: 865 K 865
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 139/297 (46%), Gaps = 35/297 (11%)
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF-HDDVLAQ 157
L Y ++ A L+ + G PD+ + +LI ++G + + + ++A
Sbjct: 64 LFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIAC 123
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + + LI+ CK+G S A+ LLR R I D V YNT+I LC+ L A
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGLCEHGLADEA 180
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE------------------- 258
+ SEMV GI P+ V+Y+ LI GFC VG +A L+DE
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNL 240
Query: 259 ---------MGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
M + DPDV T++ +++ L K GKV E +L M + V P+ VTY +L
Sbjct: 241 HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTL 300
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK---IKMADEALNLLAE 363
+D N A +++ M RG D+ Y ++++GL K ++ A++ +L E
Sbjct: 301 VDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 134/281 (47%)
Query: 84 MEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK 143
M GI+P + T NI++N G + + G +P ++ ++ LC +GK
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 144 IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
++ A+ + ++ N +Y ++ K A + + GIK +YNT
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 204 IIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN 263
+I +LCK + A + +M A+G P+ VT+++L++G+ + +++A+ M
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 264 IDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ 323
I P+V TY ++ L G ++E L+ M +G++PD TYN+L+ G + + +
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803
Query: 324 DVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ M G P +YN++I+ + +A LL EM
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEM 844
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 137/281 (48%), Gaps = 1/281 (0%)
Query: 84 MEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK 143
M+ G+ +V+ N+LI+ G++ + ++ G+ ++G +PD TF ++ G
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGD 588
Query: 144 IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
+ L+ D + + G + +S ++ LC+ G+ A+ +L ++ I P++ Y
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 204 IIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN 263
+D+ K K F + +++ GI + Y+ LI C +G K+A ++ +M +
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 264 IDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ 323
PD T+ L+ VR+A + +VM++ G+ P+V TYN+++ G + +
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 324 DVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ M RG PD +YN +I+G KI ++ + EM
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM 809
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 149/274 (54%), Gaps = 1/274 (0%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF 150
P++VT L++ C G ++SA ++ +L++ P+ +T++++I G G ++ A+
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
+ Q + N +YGT+I+GL K G+ A+EL + ++ G++ + + + +++ L +
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 481
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
+ L +MV+KG++ + + Y++LI F G + A+ +EM + + DV +
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 541
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
Y +L+ + K GKV A M ++G++PD+ T+N +M+ + +++ M
Sbjct: 542 YNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 600
Query: 331 QRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
G P + S NI++ LC+ +EA+++L +M
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQM 634
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 147/315 (46%), Gaps = 1/315 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A F +L+ P + + ++ L K S+A + QM + P++VT + +I
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N Y G + A S+L + + P+ T+ T+I GL GK + A++ ++ G
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N L+N L ++G L++ + +G+ D + Y ++ID K A
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAW 526
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
EM +G+ +VV+Y+ LI G G++ A M K I+PD+ T+ I++++ K
Sbjct: 527 AEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRK 585
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G + M G+KP +++ N ++ C ++ +A + N M P++ +
Sbjct: 586 QGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTT 645
Query: 341 YNIIINGLCKIKMAD 355
Y I ++ K K AD
Sbjct: 646 YRIFLDTSSKHKRAD 660
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 168/324 (51%), Gaps = 1/324 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D + + RM Q ++ ++ ++ L + A S+ ++++ +VT N ++
Sbjct: 273 DCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML 332
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+C G+I + L I++ + +++ LIKGL +GKI A + A+G+
Sbjct: 333 GGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA 391
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
++ +YG I+GLC G + AL +++ ++ G DV Y +IID LCK K + A +L
Sbjct: 392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL 451
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
EM G+ N +ALI G +L +A L EMG P V +Y IL+ L K
Sbjct: 452 VKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCK 511
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GK EA + M++ G KPD+ TY+ L+ G C +++ A ++++ Q G DV
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
+NI+I+GLC + D+A+ ++A M
Sbjct: 572 HNILIHGLCSVGKLDDAMTVMANM 595
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 167/321 (52%), Gaps = 7/321 (2%)
Query: 43 ISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYST----AISLSHQM-EFTGIKPSLVTMN 97
++H +R++++ + V S++KT ++ A+ + +M E G +P++ + N
Sbjct: 59 VNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYN 118
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
L+N + Q S+ A G P+ T+ LIK C + ++A F D + +
Sbjct: 119 TLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKE 178
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
GF + SY T+IN L K G+ ALEL + RG+ PDV YN +ID K+K A
Sbjct: 179 GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA 238
Query: 218 FDLYSEMVA-KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
+L+ ++ + PNV T++ +I G G++ + + + M + D+YTY+ L+
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
L G V +A+++ + ++ DVVTYN+++ G+C ++ ++ +++ M + +
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SV 357
Query: 337 DVHSYNIIINGLCKIKMADEA 357
++ SYNI+I GL + DEA
Sbjct: 358 NIVSYNILIKGLLENGKIDEA 378
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 142/272 (52%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A+ + ++E +G + +I+C C ++ A +++ + K G + ++ LI
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
GL ++ A F ++ G VSY LI GLCK G+ A ++ + G KP
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Query: 197 DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 256
D+ Y+ ++ LC+D+ + A +L+ + + G+ +V+ ++ LI+G C VG+L A+ ++
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Query: 257 DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLV 316
M +N ++ TY L++ K G A + M K G++PD+++YN++M G C+
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMC 652
Query: 317 NEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
V+ A + F+ G P V+++NI++ +
Sbjct: 653 RGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 113/217 (52%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
N ++ L++ A +M G +P++V+ NILI C G+ A + + +L+
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
G++PD T++ L+ GLC KI AL+ L G + + + LI+GLC +G+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
A+ ++ ++ R ++V YNT+++ K + A ++ M G+ P++++Y+ ++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
G C+ + A+ D+ I P VYT+ ILV A+
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 182 ALELLRRIQG-RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
AL++ +R++ G +P + YNT++++ + K L++ G++PN+ TY+ LI
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
C + ++A G LD M + PDV++Y+ +++ L K GK+ +A + M ++GV
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET-PDVHSYNIIINGLCKIKMADEALN 359
PDV YN L+DG+ + A ++++ + + P+V ++NI+I+GL K D+ L
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 360 LLAEM 364
+ M
Sbjct: 277 IWERM 281
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 1/201 (0%)
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
SY TL+N + + L + G+ P++ YN +I CK K A M
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
+G P+V +YS +I G+L A+ L DEM + + PDV Y IL+D KE
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 285 REAKNMLAVMIK-QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNI 343
+ A + +++ V P+V T+N ++ G V+ ++ M Q D+++Y+
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 344 IINGLCKIKMADEALNLLAEM 364
+I+GLC D+A ++ E+
Sbjct: 296 LIHGLCDAGNVDKAESVFNEL 316
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G+A M + P + +N ++ L K + A + +M G KP L T +IL
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ C +I+ A + L+ G + D + LI GLC GK+ A+ ++ +
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N V+Y TL+ G K+G+++ A + + G++PD++ YNTI+ LC + VS+A +
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME 660
Query: 220 LYSEMVAKGISPNVVTYSALI 240
+ + GI P V T++ L+
Sbjct: 661 FFDDARNHGIFPTVYTWNILV 681
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 35/169 (20%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G+A + ML+ P + ++ +L L + + A+ L HQ +G++ ++ NIL
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNIL 575
Query: 100 INCYCHLGQINSAFSVLAGILKR-----------------------------------GY 124
I+ C +G+++ A +V+A + R G
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Query: 125 QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
QPD I++ T++KGLC+ + A++F DD G ++ L+ +
Sbjct: 636 QPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 153/291 (52%), Gaps = 1/291 (0%)
Query: 74 YSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTT 133
+ T SL H+M I PS T I+ Y G+ + A + + + G D +F T
Sbjct: 107 HPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNT 166
Query: 134 LIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
++ LC ++++A + L F ++ V+Y ++NG C + T ALE+L+ + RG
Sbjct: 167 ILDVLCKSKRVEKAYELFR-ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
I P++ YNT++ + + HA++ + EM + +VVTY+ +++GF + G++K+A
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 254 GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY 313
+ DEM + + P V TY ++ L K+ V A M M+++G +P+V TYN L+ G
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 314 CLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
E ++ +++ M G P+ +YN++I + ++AL L +M
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 45 HFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYC 104
H R L++ +P F V A+ L M G L + N +++ C
Sbjct: 115 HRMRSLRIGPSPKTFAI--VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
++ A+ + + R + DT+T+ ++ G CL + +AL+ +++ +G N
Sbjct: 173 KSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y T++ G + G+ A E ++ R + DVV Y T++ + A +++ EM
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
+ +G+ P+V TY+A+I C ++ A+ + +EM + +P+V TY +L+ L G+
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
+ ++ M +G +P+ TYN ++ Y +EV KA +F M P++ +YNI+
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Query: 345 INGLCKIKMADE 356
I+G+ K +++
Sbjct: 412 ISGMFVRKRSED 423
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 1/274 (0%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P A+ F M + + FN +L L K+K A L + VT N+
Sbjct: 142 PDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR-GRFSVDTVTYNV 200
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
++N +C + + A VL +++RG P+ T+ T++KG G+I+ A +F ++ +
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 260
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
++ V+Y T+++G GE A + + G+ P V YN +I LCK V +A
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAV 320
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
++ EMV +G PNV TY+ LI G G+ + L+ M + +P+ TY +++
Sbjct: 321 VMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYY 380
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
+ +V +A + M P++ TYN L+ G
Sbjct: 381 SECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 170/344 (49%), Gaps = 35/344 (10%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + N ++ L K++ A ++ +M++ P +T LI+ +G+++ A+ V
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL-------------------- 155
+L + ++I +T+LIK HG+ + + + D++
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 156 ---------------AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVM 200
A+ F+ + SY LI+GL K G + EL ++ +G D
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 201 YNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
YN +ID CK V+ A+ L EM KG P VVTY ++I G + +L +A L +E
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN 320
K I+ +V Y+ L+D GK G++ EA +L ++++G+ P++ T+NSL+D E+N
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+A F +M + TP+ +Y I+INGLCK++ ++A EM
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 142/267 (53%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF 150
P L +N ++C G+ ++ I R + PD +++ LI GL G +
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
+ QG +L+ +Y +I+G CK G+ + A +LL ++ +G +P VV Y ++ID L K
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
+ A+ L+ E +K I NVV YS+LI GF VG++ +A +L+E+ K + P++YT
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
+ L+DAL K ++ EA M + P+ VTY L++G C V + NKA + M
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 331 QRGETPDVHSYNIIINGLCKIKMADEA 357
++G P SY +I+GL K EA
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEA 781
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 139/296 (46%), Gaps = 1/296 (0%)
Query: 69 VKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDT 128
VK + M +P+ LI + + + ++ + + GY+P
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 129 ITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRR 188
FTTLI+G G++ AL D++ + + V Y I+ K+G+ A +
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 189 IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQ 248
I+ G+KPD V Y ++I LCK + A +++ + P Y+ +I G+ G+
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNS 308
+A LL+ K P V Y ++ L K GKV EA + M K+ P++ TYN
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNI 382
Query: 309 LMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
L+D C +++ A ++ ++M + G P+V + NI+++ LCK + DEA + EM
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 153/358 (42%), Gaps = 36/358 (10%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F + + P + +N ++ + A SL + G PS++ N ++
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C +G+++ A V +K+ P+ T+ LI LC GK+ A + D + G
Sbjct: 351 TCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N + +++ LCK + A + + + PD + + ++ID L K V A+ +
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 221 YSEMVAKGISPNVVTYSALIYGF---------------------------------CI-- 245
Y +M+ N + Y++LI F C+
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ ++ + +E+ + PD +Y+IL+ L K G E + M +QG D
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
YN ++DG+C +VNKA + M +G P V +Y +I+GL KI DEA L E
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 140/284 (49%), Gaps = 1/284 (0%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F +M ++ P + F ++ K +A+SL +M+ + + +V N+ I+ +
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
+G+++ A+ I G +PD +T+T++I LC ++ A++ + + + +
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y T+I G G+ A LL R + +G P V+ YN I+ L K V A ++ EM
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM- 369
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
K +PN+ TY+ LI C G+L A L D M + P+V T I+VD L K K+
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
EA M M + PD +T+ SL+DG V V+ A V+ M
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 139/295 (47%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P + F + P ++ ++ L+K + L + M+ G NI
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
+I+ +C G++N A+ +L + +G++P +T+ ++I GL ++ A ++ ++
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
LN V Y +LI+G K+G A +L + +G+ P++ +N+++D+L K + ++ A
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+ M +PN VTY LI G C V + +A EM + + P +YT ++ L
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
K G + EA + G PD YN++++G N A +F +RG
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 152/358 (42%), Gaps = 36/358 (10%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+S + M I +N + S K A H++E G+KP VT +I
Sbjct: 222 ALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C +++ A + + K P T + T+I G GK A + A+G +
Sbjct: 282 VLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ ++Y ++ L K+G+ AL++ ++ + P++ YN +ID LC+ + AF+L
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
M G+ PNV T + ++ C +L +A + +EM K PD T+ L+D LGK
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV 460
Query: 282 GKVREA-----------------------KNML------------AVMIKQGVKPDVVTY 306
G+V +A KN MI Q PD+
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
N+ MD E K + +F + R PD SY+I+I+GL K A+E L M
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 152/316 (48%), Gaps = 1/316 (0%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
M + P + ++ + H ++L QM+ G +P++ LI + G+
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
++SA S+L + D + + I GK+ A +F ++ A G ++V+Y +
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
+I LCK A+E+ ++ P YNT+I A+ L AKG
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
P+V+ Y+ ++ +G++ +A+ + +EM K+ P++ TY IL+D L + GK+ A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+ M K G+ P+V T N ++D C ++++A +F M + TPD ++ +I+GL
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 349 CKIKMADEALNLLAEM 364
K+ D+A + +M
Sbjct: 458 GKVGRVDDAYKVYEKM 473
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F M + + P + +N ++ L + TA L M+ G+ P++ T+NI++
Sbjct: 361 EALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C +++ A ++ + + PD ITF +LI GL G++ A + ++ +L
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N + Y +LI G ++ + + + PD+ + NT +D + K +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ E+ A+ P+ +YS LI+G G + L M + D Y I++D K
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GKV +A +L M +G +P VVTY S++DG ++ +++A +F + +V
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y+ +I+G K+ DEA +L E+
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEEL 683
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + + V+ L K A L + + I+ ++V + LI+ + +G+I+ A+ +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L ++++G P+ T+ +L+ L +I AL + NQV+YG LINGLCK
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
+ + + A + +Q +G+KP + Y T+I L K ++ A L+ A G P+
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+A+I G + A L +E + + T +L+D L K + +A + AV+
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859
Query: 296 KQG 298
+ G
Sbjct: 860 ETG 862
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
++Q TP ++ +N +L +LVK + + A+ M+ P+ VT ILIN C + +
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
N AF + K+G +P TI++TT+I GL G I A D A G + + Y
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 169 LINGLCKLGETSAALELLRRIQGRGI----KPDVVMYNTIIDSLC 209
+I GL A L + RG+ K VV+ +T+ + C
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDC 847
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%)
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
SY +L+ + + A ++L + G P V ++ K + +D+ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
P Y+ LI F V + L +M +P V+ +T L+ KEG+V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
A ++L M + D+V YN +D + V +V+ A F+ + G PD +Y +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 345 INGLCKIKMADEALNLLAEM 364
I LCK DEA+ + +
Sbjct: 280 IGVLCKANRLDEAVEMFEHL 299
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 161/317 (50%), Gaps = 1/317 (0%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
+L + P + +N ++ +K + A L + I PS+VT N LI+ C G
Sbjct: 365 LLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
+ A + + + PD IT+TTL+KG +G + A + +D++L +G + +Y T
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 169 LINGLCKLGETSAALELLRR-IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
G +LG++ A L + PD+ +YN ID LCK + A + ++
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G+ P+ VTY+ +I G+ GQ K A L DEM K + P V TY +L+ K G++ +A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
M K+GV+P+V+T+N+L+ G C +++A M + G P+ +SY ++I+
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 348 LCKIKMADEALNLLAEM 364
C + +E + L EM
Sbjct: 665 NCDFEKWEEVVKLYKEM 681
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 160/319 (50%), Gaps = 4/319 (1%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F +M++ P + N VL L ++ + A ++ M GI P+++T N +++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G + + + +R + +T+ LI G +GK++ A +FH D+ GF + S
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+ LI G CK G A + + GI P YN I +LC + A +L S M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
A P+VV+Y+ L++G+ +G+ +A L D++ +I P + TY L+D L + G +
Sbjct: 371 A----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
A+ + M Q + PDV+TY +L+ G+ ++ A +V++ M ++G PD ++Y
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 346 NGLCKIKMADEALNLLAEM 364
G ++ +D+A L EM
Sbjct: 487 VGELRLGDSDKAFRLHEEM 505
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 146/296 (49%), Gaps = 1/296 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P I +N ++ L ++ + A L +M I P ++T L+ + G ++ A V
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS-YGTLINGLC 174
+L++G +PD +TT G G +A + H++++A ++ Y I+GLC
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 526
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
K+G A+E R+I G+ PD V Y T+I ++ A +LY EM+ K + P+V+
Sbjct: 527 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
TY LIYG G+L+QA EM + + P+V T+ L+ + K G + EA L M
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
++G+ P+ +Y L+ C + + ++ M + PD +++ + L K
Sbjct: 647 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 1/248 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIK-PSLVTMNILI 100
A ++ ML+ P + + ++ A L +M T P L N+ I
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 522
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C +G + A I + G PD +T+TT+I+G +G+ + A +D++L +
Sbjct: 523 DGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ ++Y LI G K G A + ++ RG++P+V+ +N ++ +CK + A+
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 642
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+M +GI PN +Y+ LI C + ++ + L EM K I+PD YT+ L L K
Sbjct: 643 LCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Query: 281 EGKVREAK 288
+ + RE +
Sbjct: 703 DHESREVE 710
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 160/323 (49%), Gaps = 9/323 (2%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F +M+++ I +N ++ + K+ A L +ME G+ P + T N LI+ YC
Sbjct: 191 FKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCK 250
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL----QFHDDVLAQGFLL 161
A SV + + G P+ +T+ + I G G+++ A + DDV A
Sbjct: 251 KSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTA----- 305
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N V+Y TLI+G C++ + AL L ++ RG P VV YN+I+ LC+D + A L
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
+EM K I P+ +T + LI +C + + A+ + +M + D+Y+Y L+ K
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
++ AK L MI++G P TY+ L+DG+ N+ ++ + +RG DV Y
Sbjct: 426 LELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY 485
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
+I +CK++ D A L M
Sbjct: 486 RGLIRRICKLEQVDYAKVLFESM 508
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 155/300 (51%), Gaps = 1/300 (0%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
+P A + M + P IF +N +++ K + A+S+ +ME +G+ P++VT N
Sbjct: 218 DPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYN 277
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
I+ + G++ A + I K + +T+TTLI G C I AL+ + + ++
Sbjct: 278 SFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESR 336
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
GF V+Y +++ LC+ G A LL + G+ I+PD + NT+I++ CK + + A
Sbjct: 337 GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSA 396
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+ +M+ G+ ++ +Y ALI+GFC V +L+ A L M K P TY+ LVD
Sbjct: 397 VKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDG 456
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
+ K E +L K+G+ DV Y L+ C + +V+ A+ +F +M ++G D
Sbjct: 457 FYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGD 516
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 158/324 (48%), Gaps = 1/324 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D+I F ++ P + +L SLVK + T + +M G+ ++ N+L+
Sbjct: 151 DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLV 210
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ G A +L+ + ++G PD T+ TLI C AL D + G
Sbjct: 211 HACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVA 270
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V+Y + I+G + G A L R I+ + + V Y T+ID C+ + A L
Sbjct: 271 PNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRL 329
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
M ++G SP VVTY++++ C G++++A LL EM K I+PD T L++A K
Sbjct: 330 REVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCK 389
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ A + MI+ G+K D+ +Y +L+ G+C V E+ A++ +M ++G +P +
Sbjct: 390 IEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYAT 449
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y+ +++G DE LL E
Sbjct: 450 YSWLVDGFYNQNKQDEITKLLEEF 473
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 147/291 (50%), Gaps = 1/291 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
F+ ++ K + +I + Q+ G+KP L +L+N ++ + + ++
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
K G + + L+ G ++A + ++ +G + +Y TLI+ CK
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
AL + R++ G+ P++V YN+ I ++ + A L+ E + ++ N VTY+ LI
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLI 314
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G+C + + +A+ L + M + P V TY ++ L ++G++REA +L M + ++
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
PD +T N+L++ YC + ++ A V M + G D++SY +I+G CK+
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 20/333 (6%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFN-KVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
P + S F +PS+ + + K++ L K KH+ TA L ++ + S + +
Sbjct: 60 PSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLR 119
Query: 98 ILIN------------------CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLC 139
L+ Y G IN + V I G +P T L+ L
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179
Query: 140 LHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVV 199
+ ++ G + N Y L++ K G+ A +LL ++ +G+ PD+
Sbjct: 180 KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIF 239
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
YNT+I CK + A + M G++PN+VTY++ I+GF G++++A L E+
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI 299
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
++ + TYT L+D + + EA + VM +G P VVTYNS++ C +
Sbjct: 300 K-DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI 358
Query: 320 NKAQDVFNAMSQRGETPDVHSYNIIINGLCKIK 352
+A + MS + PD + N +IN CKI+
Sbjct: 359 REANRLLTEMSGKKIEPDNITCNTLINAYCKIE 391
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 107/243 (44%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A+ L ME G P +VT N ++ C G+I A +L + + +PD IT TLI
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
C + A++ ++ G L+ SY LI+G CK+ E A E L + +G P
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
Query: 197 DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 256
Y+ ++D L E +G+ +V Y LI C + Q+ A L
Sbjct: 446 GYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLF 505
Query: 257 DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLV 316
+ M K + D +T + A + GKV EA + VM + + ++ Y S+ Y
Sbjct: 506 ESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGD 565
Query: 317 NEV 319
N+V
Sbjct: 566 NDV 568
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 34/224 (15%)
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
K G + ++ + +I+ G+KP + +++SL K +L + ++ +MV G+ N+
Sbjct: 145 KAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIH 204
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
Y+ L++ G ++A LL EM K + PD++TY L+ K+ EA ++ M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 295 IKQGVKPDVVTYNS----------------------------------LMDGYCLVNEVN 320
+ GV P++VTYNS L+DGYC +N+++
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDID 324
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+A + M RG +P V +YN I+ LC+ EA LL EM
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 92/201 (45%), Gaps = 4/201 (1%)
Query: 43 ISHFNRMLQMPS----TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
I NR+L S P N ++ + K + +A+ + +M +G+K + +
Sbjct: 358 IREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKA 417
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
LI+ +C + ++ +A L ++++G+ P T++ L+ G K + ++ +G
Sbjct: 418 LIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRG 477
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
+ Y LI +CKL + A L ++ +G+ D V++ T+ + + V+ A
Sbjct: 478 LCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEAS 537
Query: 219 DLYSEMVAKGISPNVVTYSAL 239
L+ M + + N+ Y ++
Sbjct: 538 ALFDVMYNRRLMVNLKLYKSI 558
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 167/309 (54%), Gaps = 3/309 (0%)
Query: 58 IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG--QINSAFSV 115
++ F+ ++++ ++ + AIS+ + M+ G++P+LVT N +I+ C G +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKF 326
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ + G QPD ITF +L+ G + A D++ + + SY TL++ +CK
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G+ A E+L ++ + I P+VV Y+T+ID K A +L+ EM GI+ + V+
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+ L+ + VG+ ++A+ +L EM I DV TY L+ GK+GK E K + M
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
++ V P+++TY++L+DGY +A ++F G DV Y+ +I+ LCK +
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 356 EALNLLAEM 364
A++L+ EM
Sbjct: 567 SAVSLIDEM 575
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 151/285 (52%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F+ M + P FN +L + + A +L +M I+ + + N L++ C
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
GQ++ AF +LA + + P+ ++++T+I G G+ AL ++ G L++VS
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y TL++ K+G + AL++LR + GIK DVV YN ++ K +++EM
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
+ + PN++TYS LI G+ G K+A+ + E + DV Y+ L+DAL K G V
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
A +++ M K+G+ P+VVTYNS++D + ++++ D N S
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGS 611
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 157/320 (49%), Gaps = 1/320 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTK-HYSTAISLSHQMEFTGIKPSLVTMNIL 99
+AIS FN M + P + +N V+ + K + +M+ G++P +T N L
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSL 345
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ G +A ++ + R + D ++ TL+ +C G++ A + + +
Sbjct: 346 LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ N VSY T+I+G K G AL L ++ GI D V YNT++ K A D
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALD 465
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ EM + GI +VVTY+AL+ G+ G+ + + EM +++ P++ TY+ L+D
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS 525
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
K G +EA + G++ DVV Y++L+D C V A + + M++ G +P+V
Sbjct: 526 KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVV 585
Query: 340 SYNIIINGLCKIKMADEALN 359
+YN II+ + D + +
Sbjct: 586 TYNSIIDAFGRSATMDRSAD 605
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 131/238 (55%), Gaps = 9/238 (3%)
Query: 132 TTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQG 191
+ +I L +GK+ A + + A G+ ++ LI+ + G A+ + ++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 192 RGIKPDVVMYNTIIDSLCKD----KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVG 247
G++P++V YN +ID+ K K V+ FD EM G+ P+ +T+++L+ C G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD---EMQRNGVQPDRITFNSLL-AVCSRG 352
Query: 248 QLKQAI-GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
L +A L DEM + I+ DV++Y L+DA+ K G++ A +LA M + + P+VV+Y
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++++DG+ ++A ++F M G D SYN +++ K+ ++EAL++L EM
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 116/262 (44%), Gaps = 14/262 (5%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N +L+ K A+ + +M GIK +VT N L+ Y G+ + V +
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ P+ +T++TLI G G + A++ + + G + V Y LI+ LCK G
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
+A+ L+ + GI P+VV YN+IID+ + + + D YS + S + ++
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD-YSNGGSLPFSSSALSALTET 625
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G ++ Q + K+ + + + +++ K M + +K
Sbjct: 626 EGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRK-------------MHQLEIK 672
Query: 301 PDVVTYNSLMDGYCLVNEVNKA 322
P+VVT++++++ N A
Sbjct: 673 PNVVTFSAILNACSRCNSFEDA 694
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 23/233 (9%)
Query: 58 IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLA 117
+ +N +L K Y + +M+ + P+L+T + LI+ Y G A +
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK-- 175
G + D + ++ LI LC +G + A+ D++ +G N V+Y ++I+ +
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Query: 176 -------------LGETSAALELLRRIQGRGI----KPDVVMYNTIIDSLCKDKL--VSH 216
L +S+AL L +G + N C++ + +S
Sbjct: 599 TMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSC 658
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
+++ +M I PNVVT+SA++ + A LL+E+ L D VY
Sbjct: 659 ILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNKVY 709
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 162/304 (53%), Gaps = 2/304 (0%)
Query: 62 NKVLTSLVKTKHYSTAISL-SHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
N +L L++ + + ++ + E GI P++ T N+L+ C I SA+ VL I
Sbjct: 159 NTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIP 218
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G P+ +T+TT++ G G ++ A + +++L +G+ + +Y L++G CKLG S
Sbjct: 219 SMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS 278
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A ++ ++ I+P+ V Y +I +LCK+K A +++ EM+ + P+ +I
Sbjct: 279 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVI 338
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
C ++ +A GL +M N PD + L+ L KEG+V EA+ + ++G
Sbjct: 339 DALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD-EFEKGSI 397
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
P ++TYN+L+ G C E+ +A +++ M +R P+ +YN++I GL K E + +
Sbjct: 398 PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRV 457
Query: 361 LAEM 364
L EM
Sbjct: 458 LEEM 461
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 154/308 (50%), Gaps = 1/308 (0%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP IF N ++ +L K +A + ++ G+ P+LVT ++ Y G + SA
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
VL +L RG+ PD T+T L+ G C G+ A DD+ N+V+YG +I LC
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
K ++ A + + R PD + +ID+LC+D V A L+ +M+ P+
Sbjct: 308 KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 367
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
S LI+ C G++ +A L DE +I P + TY L+ + ++G++ EA + M
Sbjct: 368 LLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
++ KP+ TYN L++G V + V M + G P+ ++ I+ GL K+
Sbjct: 427 YERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKE 486
Query: 355 DEALNLLA 362
++A+ +++
Sbjct: 487 EDAMKIVS 494
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 147/293 (50%), Gaps = 7/293 (2%)
Query: 41 DAISHFNRMLQMPS---TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
D S + + ++PS P + + +L V +A + +M G P T
Sbjct: 206 DIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYT 265
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+L++ YC LG+ + A +V+ + K +P+ +T+ +I+ LC K A D++L +
Sbjct: 266 VLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLER 325
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
F+ + +I+ LC+ + A L R++ PD + +T+I LCK+ V+ A
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L+ E KG P+++TY+ LI G C G+L +A L D+M + P+ +TY +L++
Sbjct: 386 RKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
L K G V+E +L M++ G P+ T+ L +G + ++ K +D +S
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEG---LQKLGKEEDAMKIVS 494
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
ML P + ++ K +S A ++ ME I+P+ VT ++I C +
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
A ++ +L+R + PD+ +I LC K+ A +L + + T
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
LI+ LCK G + A +L + +G P ++ YNT+I +C+ ++ A L+ +M +
Sbjct: 372 LIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
PN TY+ LI G G +K+ + +L+EM P+ T+ IL + L K GK +A
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 490
Query: 289 NMLAVMIKQG 298
++++ + G
Sbjct: 491 KIVSMAVMNG 500
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK-----GISP 231
G +++ + RI G+K V NT+++ L +++ FDL M GI+P
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQ----RFDLVHAMFKNSKESFGITP 189
Query: 232 NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNML 291
N+ T + L+ C ++ A +LDE+ + P++ TYT ++ G + AK +L
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVL 249
Query: 292 AVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
M+ +G PD TY LMDGYC + ++A V + M + P+ +Y ++I LCK
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 352 KMADEALNLLAEM 364
K + EA N+ EM
Sbjct: 310 KKSGEARNMFDEM 322
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 4/220 (1%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G+A + F+ ML+ P KV+ +L + A L +M P ++ L
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ C G++ A L ++G P +T+ TLI G+C G++ A + DD+ +
Sbjct: 373 IHWLCKEGRVTEA-RKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKC 431
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N +Y LI GL K G + +L + G P+ + + + L K A
Sbjct: 432 KPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMK 491
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+ S V G V S ++ G+L + + L E+
Sbjct: 492 IVSMAVMNG---KVDKESWELFLKKFAGELDKGVLPLKEL 528
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 148/277 (53%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
GI+P +VT + L+N +C I A V + K G + D + T LI LC + + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
L+ + +G N V+Y +LI GLCK G + A L + + I P+V+ ++ +ID+
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
K +S +Y M+ I PNV TYS+LIYG C+ ++ +AI +LD M K P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
V TY+ L + K +V + +L M ++GV + V+ N+L+ GY +++ A VF
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 328 AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M+ G P++ SYNI++ GL ++AL+ M
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 158/317 (49%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
+M+++ P I + ++ + A+ ++ QME GIK +V ILI+ C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+ A VL + RG P+ +T+++LI GLC G++ A + ++ ++ N +++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
LI+ K G+ S + + + I P+V Y+++I LC V A + M++K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G +PNVVTYS L GF ++ I LLD+M + + + + L+ + GK+ A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
+ M G+ P++ +YN ++ G EV KA F M + D+ +Y I+I+G
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 348 LCKIKMADEALNLLAEM 364
+CK M EA +L ++
Sbjct: 303 MCKACMVKEAYDLFYKL 319
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 150/296 (50%), Gaps = 11/296 (3%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ RM +P + ++ ++T L K+ + A H+M+ I P+++T + LI+
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y G+++ SV +++ P+ T+++LI GLC+H ++ A++ D ++++G
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N V+Y TL NG K ++LL + RG+ + V NT+I + + A ++
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
M + G+ PN+ +Y+ ++ G G++++A+ + M D D+ TYTI++ + K
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 306
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKA-----QDVFNAMSQR 332
V+EA ++ + + V+PD Y ++ E+N+A D N Q+
Sbjct: 307 CMVKEAYDLFYKLKFKRVEPDFKAYT------IMIAELNRAGMRTEADALNRFYQK 356
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 168/325 (51%), Gaps = 7/325 (2%)
Query: 47 NRMLQMPSTPPIFEF-------NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
+R+ + S FEF N ++ S K + + +M+ GI+P+L T N L
Sbjct: 169 DRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFL 228
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+N ++SA V + +PD +T+ T+IKG C G+ Q+A++ D+ +G
Sbjct: 229 MNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGH 288
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
++++Y T+I + + + L + + +GI+ ++ +I LCK+ ++ +
Sbjct: 289 EADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYT 348
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
++ M+ KG PNV Y+ LI G+ G ++ AI LL M + PDV TY+++V+ L
Sbjct: 349 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 408
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
K G+V EA + G+ + + Y+SL+DG V++A+ +F MS++G T D +
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
YN +I+ K + DEA+ L M
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRM 493
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 1/320 (0%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ +M + P ++ +N ++ LV +A + ME IKP +VT N +I YC
Sbjct: 210 WRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCK 269
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
GQ A L + RG++ D IT+ T+I+ + + ++ +G + +
Sbjct: 270 AGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHA 329
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+ +I GLCK G+ + + + +G KP+V +Y +ID K V A L M+
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
+G P+VVTYS ++ G C G++++A+ + + Y+ L+D LGK G+V
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM-SQRGETPDVHSYNII 344
EA+ + M ++G D YN+L+D + +V++A +F M + G V++Y I+
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Query: 345 INGLCKIKMADEALNLLAEM 364
++G+ K +EAL L M
Sbjct: 510 LSGMFKEHRNEEALKLWDMM 529
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 2/323 (0%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G ++ + M + P F+ V+ L K + ++ M G KP++ +L
Sbjct: 309 GSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVL 368
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ Y G + A +L ++ G++PD +T++ ++ GLC +G+++ AL + G
Sbjct: 369 IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL 428
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+N + Y +LI+GL K G A L + +G D YN +ID+ K + V A
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIA 488
Query: 220 LYSEM-VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
L+ M +G V TY+ L+ G + ++A+ L D M K I P + L L
Sbjct: 489 LFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 548
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
GKV A +L + GV D +++ C + +A + + +++RG
Sbjct: 549 CLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERGREVPG 607
Query: 339 HSYNIIINGLCKIKMADEALNLL 361
++IN L K+ AD A+ L+
Sbjct: 608 RIRTVMINALRKVGKADLAMKLM 630
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 35/274 (12%)
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
++ Y + + +L+ L L + R ++ F + + LI KLG
Sbjct: 145 QKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVE 204
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
L + R+++ GI+P + YN +++ L V A ++ M + I P++VTY+ +I
Sbjct: 205 ELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMI 264
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA----------------------- 277
G+C GQ ++A+ L +M + + D TY ++ A
Sbjct: 265 KGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 324
Query: 278 ------------LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
L KEGK+ E + MI++G KP+V Y L+DGY V A +
Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 384
Query: 326 FNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
+ M G PDV +Y++++NGLCK +EAL+
Sbjct: 385 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 2/310 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINC-YCHLGQINSAFS 114
P + F ++ K + + L +++ G++ S+ +N +I+ Y H +++ A S
Sbjct: 273 PTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAES 332
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ I+ +PD T+ LI LC GK + A+ F D+ +G + N +SY LI C
Sbjct: 333 I-GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC 391
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
K E A +LL ++ RG KPD+V Y +I L + A ++ +++ +G+SP+
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAA 451
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
Y+ L+ G C G+ A L EM +NI PD Y Y L+D + G EA+ + ++
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLS 511
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
+++GVK DVV +N+++ G+C +++A N M++ PD +Y+ II+G K +
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDM 571
Query: 355 DEALNLLAEM 364
A+ + M
Sbjct: 572 ATAIKIFRYM 581
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 149/295 (50%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + +N ++ L K A+ + G+ P+ ++ LI YC + + A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L + +RG +PD +T+ LI GL + G + A+ ++ +G + Y L++GLCK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G A L + R I PD +Y T+ID + A ++S V KG+ +VV
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++A+I GFC G L +A+ ++ M +++ PD +TY+ ++D K+ + A + M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
K KP+VVTY SL++G+C + A++ F M R P+V +Y +I L K
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 155/344 (45%), Gaps = 35/344 (10%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
S P + N +L+ LVK++ A + +M G + IL+ C+ G++
Sbjct: 166 SVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGR 225
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
++ G +G P+ + + T+I G C G I+ A ++ +GF+ ++GT+ING
Sbjct: 226 KLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGF 285
Query: 174 CKLGETSAALELLRRIQGRGI-----------------------------------KPDV 198
CK G+ A+ LL ++ RG+ KPDV
Sbjct: 286 CKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDV 345
Query: 199 VMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 258
YN +I+ LCK+ A E KG+ PN ++Y+ LI +C + A LL +
Sbjct: 346 ATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQ 405
Query: 259 MGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE 318
M + PD+ TY IL+ L G + +A NM +I +GV PD YN LM G C
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 319 VNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLA 362
A+ +F+ M R PD + Y +I+G + DEA + +
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 129/267 (48%), Gaps = 1/267 (0%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
+M + P I + ++ LV + H A+++ ++ G+ P N+L++ C G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+ A + + +L R PD + TLI G G A + + +G ++ V +
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
+I G C+ G AL + R+ + PD Y+TIID K + ++ A ++ M
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE- 286
PNVVTY++LI GFC G K A EM L+++ P+V TYT L+ +L KE E
Sbjct: 585 KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEK 644
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGY 313
A +M+ P+ VT+N L+ G+
Sbjct: 645 AVYYWELMMTNKCVPNEVTFNCLLQGF 671
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%)
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
PD I +L+ L ++ A + +D++ +G ++ S L+ G+C G+ +L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
+ G+G P++V YNTII CK + +A+ ++ E+ KG P + T+ +I GFC
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G + LL E+ + + V+ ++DA + G + + +I KPDV T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN L++ C + A + S++G P+ SY +I CK K D A LL +M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 148/335 (44%), Gaps = 15/335 (4%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA++ +++ +P +N +++ L KT + A L +M I P LI
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + G + A V + +++G + D + +IKG C G + AL + + + +
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
++ +Y T+I+G K + + A+++ R ++ KP+VV Y ++I+ C A +
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQ-LKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ EM + + PNVVTY+ LI L++A+ + M P+ T+ L+
Sbjct: 613 FKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFV 672
Query: 280 KE--GKVREAKN------------MLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
K+ GKV + M G YNS + C+ V A
Sbjct: 673 KKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMF 732
Query: 326 FNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
+ M ++G +PD S+ I++G C + + + N+
Sbjct: 733 QDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 170/328 (51%), Gaps = 2/328 (0%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P +A S FN +++ P + + ++T+L + KH+ + +SL ++E G+KP + N
Sbjct: 335 PQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNA 394
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
+IN G ++ A + + + G +P TF TLIKG GK++ + + D +L
Sbjct: 395 IINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDE 454
Query: 159 FLL-NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
L N + L+ C + A ++ ++Q G+KPDVV +NT+ + + A
Sbjct: 455 MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA 514
Query: 218 FDL-YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
D+ M+ + PNV T ++ G+C G++++A+ M + P+++ + L+
Sbjct: 515 EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 574
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
+ ++ +M + GVKPDVVT+++LM+ + V ++ + ++++ M + G P
Sbjct: 575 GFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP 634
Query: 337 DVHSYNIIINGLCKIKMADEALNLLAEM 364
D+H+++I+ G + ++A +L +M
Sbjct: 635 DIHAFSILAKGYARAGEPEKAEQILNQM 662
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 167/334 (50%), Gaps = 11/334 (3%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKT-KHYSTAISLSHQMEFTGIKPSLVTM 96
N A+ F +M + P FN ++ K K ++ L + ++P+ T
Sbjct: 404 NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTC 463
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
NIL+ +C+ +I A++++ + G +PD +TF TL K G A +D++
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA----EDMII 519
Query: 157 QGFLLNQV-----SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
L N+V + GT++NG C+ G+ AL R++ G+ P++ ++N++I
Sbjct: 520 PRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNI 579
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTY 271
+ ++ M G+ P+VVT+S L+ + VG +K+ + +M IDPD++ +
Sbjct: 580 NDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF 639
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
+IL + G+ +A+ +L M K GV+P+VV Y ++ G+C E+ KA V+ M
Sbjct: 640 SILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG 699
Query: 332 -RGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
G +P++ +Y +I G + K +A LL +M
Sbjct: 700 IVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDM 733
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 4/241 (1%)
Query: 127 DTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELL 186
D + T L+ GL G+ Q A + ++ +G + ++Y TL+ L + + L L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIV 246
+++ G+KPD +++N II++ + + A ++ +M G P T++ LI G+ +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 247 GQLKQAIGLLDEMGLKN--IDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
G+L+++ LLD M L++ + P+ T ILV A + K+ EA N++ M GVKPDVV
Sbjct: 438 GKLEESSRLLDMM-LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 305 TYNSLMDGYCLVNEVNKAQD-VFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
T+N+L Y + A+D + M P+V + I+NG C+ +EAL
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR 556
Query: 364 M 364
M
Sbjct: 557 M 557
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 152/299 (50%), Gaps = 8/299 (2%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS-VLAGIL 120
N ++ + + A ++ ++M+ G+KP +VT N L Y +G +A ++ +L
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRML 523
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+P+ T T++ G C GK++ AL+F + G N + +LI G + +
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
E++ ++ G+KPDVV ++T++++ + ++Y++M+ GI P++ +S L
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA----KNMLAVMIK 296
G+ G+ ++A +L++M + P+V YT ++ G++++A K M ++
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV-- 701
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
G+ P++ TY +L+ G+ + KA+++ M + P + +I +G I +++
Sbjct: 702 -GLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSN 759
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
RML P + ++ + A+ ++M+ G+ P+L N LI + ++
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
++ V+ + + G +PD +TF+TL+ G ++R + + D+L G + ++
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA- 226
L G + GE A ++L +++ G++P+VV+Y II C + A +Y +M
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 700
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
G+SPN+ TY LI+GF Q +A LL +M KN+ P T ++ D
Sbjct: 701 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 155/304 (50%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
++ ++ VK K ++ A ++ M G+KP ++ N +I+ +C +G ++ A + +
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
K ++P T TF +I G G ++R+L+ D + G + ++ LINGL + +
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A+E+L + G+ + Y I+ AF+ ++ + +G+ ++ TY AL+
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
C G+++ A+ + EM +NI + + Y IL+D + G V EA +++ M K+GVK
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
PD+ TY S + ++N+A M G P++ +Y +I G + + ++AL+
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 361 LAEM 364
EM
Sbjct: 822 YEEM 825
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 146/309 (47%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
+A + F M++ P + +N ++++ + AI +M+ +P+ T +
Sbjct: 536 ANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPI 595
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ Y G + + V + + G P TF LI GL ++++A++ D++ G
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV 655
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N+ +Y ++ G +G+T A E R+Q G+ D+ Y ++ + CK + A
Sbjct: 656 SANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ EM A+ I N Y+ LI G+ G + +A L+ +M + + PD++TYT + A
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
K G + A + M GVKP++ TY +L+ G+ + KA + M G PD
Sbjct: 776 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKA 835
Query: 340 SYNIIINGL 348
Y+ ++ L
Sbjct: 836 VYHCLLTSL 844
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ K++ + +T + A +L +ME GI + + +++ Y + V +
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G+ P +T+ LI GKI +AL+ + +G N +Y +ING KL + +
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A + + G+KPDV++YN II + C + A EM P T+ +I
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
+G+ G +++++ + D M P V+T+ L++ L ++ ++ +A +L M GV
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
+ TY +M GY V + KA + F + G D+ +Y ++ CK AL +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 361 LAEM 364
EM
Sbjct: 717 TKEM 720
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F+ M + P + FN ++ LV+ + A+ + +M G+ + T ++ Y
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
+G AF + G D T+ L+K C G++Q AL ++ A+ N
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y LI+G + G+ A +L+++++ G+KPD+ Y + I + K ++ A EM
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
A G+ PN+ TY+ LI G+ ++A+ +EM I PD Y L+ +L +
Sbjct: 792 ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIA 851
Query: 286 EA 287
EA
Sbjct: 852 EA 853
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 160/358 (44%), Gaps = 43/358 (12%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKT----KHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
F RM TP +++ TSL+ + A+S +M+ GI+ SLVT ++++
Sbjct: 332 FERMRARGITPT----SRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVG 387
Query: 102 -----------------------------------CYCHLGQINSAFSVLAGILKRGYQP 126
+C + A +++ + + G
Sbjct: 388 GFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDA 447
Query: 127 DTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELL 186
+ T++ G + ++ L + GF V+YG LIN K+G+ S ALE+
Sbjct: 448 PIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVS 507
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIV 246
R ++ G+K ++ Y+ +I+ K K ++AF ++ +MV +G+ P+V+ Y+ +I FC +
Sbjct: 508 RVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGM 567
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
G + +AI + EM P T+ ++ K G +R + + +M + G P V T+
Sbjct: 568 GNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTF 627
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
N L++G ++ KA ++ + M+ G + + H+Y I+ G + +A +
Sbjct: 628 NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 160/360 (44%), Gaps = 45/360 (12%)
Query: 43 ISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINC 102
IS F ++ S P EF ++ + A +M GI P+ LI+
Sbjct: 298 ISAFEKI----SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 353
Query: 103 YCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLN 162
Y ++ A S + + + G + +T++ ++ G G + A + D+ LN
Sbjct: 354 YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLN 413
Query: 163 QVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYS 222
YG +I C+ A L+R ++ GI + +Y+T++D ++
Sbjct: 414 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473
Query: 223 EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
+ G +P VVTY LI + VG++ +A+ + M + + ++ TY+++++
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF---V 530
Query: 283 KVREAKNMLAV---MIKQGVKPDVVTYNSLMDGYC----------LVNEVNKAQ------ 323
K+++ N AV M+K+G+KPDV+ YN+++ +C V E+ K +
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 324 -------------------DVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+VF+ M + G P VH++N +INGL + + ++A+ +L EM
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 11/241 (4%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
+ G A +F R+ IF + +L + K+ +A++++ +M I + N
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 733
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
ILI+ + G + A ++ + K G +PD T+T+ I G + RA Q +++ A
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G N +Y TLI G + AL ++ GIKPD +Y+ ++ SL ++ A
Sbjct: 794 GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Query: 218 FDLYS-------EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
+ +YS EMV G+ ++ T A+ + C+ +++ + G L E K PD +
Sbjct: 854 Y-IYSGVMTICKEMVEAGLIVDMGT--AVHWSKCLC-KIEASGGELTETLQKTFPPDWSS 909
Query: 271 Y 271
+
Sbjct: 910 H 910
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 155/315 (49%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
M+ P +N ++ +L K H TA+ L M +G P ++T N +I C G
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
A L+ G P IT+T L++ +C + RA++ +D+ +G + V+Y +
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
L+N C+ G +++ I G++ + V YNT++ SLC + ++ + M
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
P V+TY+ LI G C L +AI +M + PD+ TY ++ A+ KEG V +A
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 404
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+L ++ P ++TYNS++DG + KA ++++ M G PD + +I G
Sbjct: 405 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 464
Query: 349 CKIKMADEALNLLAE 363
C+ + +EA +L E
Sbjct: 465 CRANLVEEAGQVLKE 479
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 149/311 (47%), Gaps = 3/311 (0%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
S P + +N V+ + + AI G P ++T +L+ C A
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAI 264
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
VL + G PD +T+ +L+ C G ++ +L+ G LN V+Y TL++ L
Sbjct: 265 EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
C E+L + P V+ YN +I+ LCK +L+S A D + +M+ + P++
Sbjct: 325 CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDI 384
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
VTY+ ++ G + AI LL + P + TY ++D L K+G +++A +
Sbjct: 385 VTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQ 444
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK--- 350
M+ G+ PD +T SL+ G+C N V +A V S RG +Y ++I GLCK
Sbjct: 445 MLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKE 504
Query: 351 IKMADEALNLL 361
I+MA E + ++
Sbjct: 505 IEMAIEVVEIM 515
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA M + P + ++ L + A+ + M +G P +T N++I
Sbjct: 122 DACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMII 181
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C G I +A +L + G PD IT+ T+I+ + +G ++A++F D L G
Sbjct: 182 GNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCP 241
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
++Y L+ +C+ ++ A+E+L + G PD+V YN++++ C+ + +
Sbjct: 242 PFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASV 301
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+++ G+ N VTY+ L++ C + +L+ M + P V TY IL++ L K
Sbjct: 302 IQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCK 361
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ A + M++Q PD+VTYN+++ V+ A ++ + P + +
Sbjct: 362 ARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLIT 421
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YN +I+GL K + +AL L +M
Sbjct: 422 YNSVIDGLAKKGLMKKALELYHQM 445
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 147/321 (45%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N AI + LQ P + + ++ + + + AI + M G P +VT N
Sbjct: 224 NAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYN 283
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
L+N C G + SV+ IL G + +T+T+ TL+ LC H + + +
Sbjct: 284 SLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQT 343
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ ++Y LINGLCK S A++ ++ + PD+V YNT++ ++ K+ +V A
Sbjct: 344 SYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDA 403
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+L + P ++TY+++I G G +K+A+ L +M I PD T L+
Sbjct: 404 IELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYG 463
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
+ V EA +L +G TY ++ G C E+ A +V M G PD
Sbjct: 464 FCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523
Query: 338 VHSYNIIINGLCKIKMADEAL 358
Y I+ G+ ++ M EA+
Sbjct: 524 ETIYTAIVKGVEEMGMGSEAV 544
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 138/270 (51%)
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDV 154
T N +++ C G++ A ++ + + P + + L++GL ++ +A+ +
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
+ G + + ++Y +I LCK G AL LL + G PDV+ YNT+I +
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
A + + + G P ++TY+ L+ C +AI +L++M ++ PD+ TY L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
V+ + G + E +++ ++ G++ + VTYN+L+ C ++ +++ N M Q
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 335 TPDVHSYNIIINGLCKIKMADEALNLLAEM 364
P V +YNI+INGLCK ++ A++ +M
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQM 375
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 146/301 (48%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
N++L +L + A L M P + + L+ + Q++ A +L ++
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
G PDTIT+ +I LC G I+ AL +D+ G + ++Y T+I + G
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
A+ + G P ++ Y +++ +C+ + A ++ +M +G P++VTY++L+
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP 301
C G L++ ++ + ++ + TY L+ +L E + +L +M + P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 302 DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
V+TYN L++G C +++A D F M ++ PD+ +YN ++ + K M D+A+ LL
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Query: 362 A 362
Sbjct: 408 G 408
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 190 QGRGIKPDVVMY-NTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQ 248
Q G+K DV + ++ S+C D + HA + SE G+ N
Sbjct: 38 QEIGLKKDVFFRCHGLLSSVCIDNVNDHA-ERSSEFHHYGVGTN---------------- 80
Query: 249 LKQAIGLLDEMGLKNIDP----DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
L+ + + + GL + P D T ++ L GK+ +A ++ VM + P
Sbjct: 81 LRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFP 140
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ ++L+ G +++++KA + M G PD +YN+II LCK AL LL +M
Sbjct: 141 SCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM 200
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 156/324 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ + RM+ P + ++ ++ L K + + + L +ME G+KP++ T I I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
G+IN A+ +L + G PD +T+T LI LC K+ A + + +
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
++V+Y TL++ + + + ++ G PDVV + ++D+LCK AFD
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
M +GI PN+ TY+ LI G V +L A+ L M + P YTY + +D GK
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G A M +G+ P++V N+ + +A+ +F + G PD +
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YN+++ K+ DEA+ LL+EM
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEM 529
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 5/303 (1%)
Query: 49 MLQMPST---PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
LQ+ ST P + +N +L + K+ L +M + + +T NI+I+
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 106 LGQINSAFSVLAGILK-RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
G ++ A + ++ R + P T+ LI GL G++ A Q + +L G N
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
Y LING K GE AA L +R+ G++PD+ Y+ ++D LC V + E+
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL-KNIDPDVYTYTILVDALGKEGK 283
G++P+VV Y+ +I G +L++A+ L +EM + I PD+YTY L+ LG G
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 284 VREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNI 343
V EA + + + G++P+V T+N+L+ GY L + A V+ M G +P+ +Y
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 344 IIN 346
+ N
Sbjct: 1108 LPN 1110
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 152/294 (51%), Gaps = 2/294 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + +N ++ L++ A + Q++ TG P + T N L++ Y G+I+ F +
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA-QGFLLNQVSYGTLINGLC 174
+ + +TIT +I GL G + AL + D+++ + F +YG LI+GL
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
K G A +L + G +P+ +YN +I+ K A L+ MV +G+ P++
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
TYS L+ C+VG++ + + E+ ++PDV Y ++++ LGK ++ EA + M
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 295 -IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
+G+ PD+ TYNSL+ + V +A ++N + + G P+V ++N +I G
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 155/319 (48%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F +M P + +L + + +ME G P +VT IL++ C
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G AF L + +G P+ T+ TLI GL ++ AL+ ++ + G +
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y I+ K G++ +ALE +++ +GI P++V N + SL K A ++ +
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
G+ P+ VTY+ ++ + VG++ +AI LL EM +PDV L++ L K +V
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
EA M M + +KP VVTYN+L+ G ++ +A ++F M Q+G P+ ++N +
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 346 NGLCKIKMADEALNLLAEM 364
+ LCK AL +L +M
Sbjct: 616 DCLCKNDEVTLALKMLFKM 634
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N G+A + M P + +N ++ L++ A+ L ME G+KP+ T
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+ I+ Y G SA + +G P+ + + L G+ + A Q +
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + + V+Y ++ K+GE A++LL + G +PDV++ N++I++L K V A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+ ++ M + P VVTY+ L+ G G++++AI L + M K P+ T+ L D
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L K +V A ML M+ G PDV TYN+++ G +V +A F+ M ++ PD
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPD 676
Query: 338 VHSYNIIINGLCKIKMADEALNLL 361
+ ++ G+ K + ++A ++
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKII 700
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 161/397 (40%), Gaps = 75/397 (18%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ +M+ M P +F +N ++ LVK A+ HQM+ + P VT+ L+
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLP 685
Query: 102 CYCHLGQINSAFSVLAGILKR-GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
I A+ ++ L QP + + LI + I A+ F + ++A G
Sbjct: 686 GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGIC 745
Query: 161 L----------------NQVS---------------------YGTLINGLCKLGETSAAL 183
N VS Y LI GL + A
Sbjct: 746 RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQ 805
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
++ +++ G PDV YN ++D+ K + F+LY EM N +T++ +I G
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865
Query: 244 CIVGQLKQAIGLL-DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLA---------- 292
G + A+ L D M ++ P TY L+D L K G++ EAK +
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 293 -------------------------VMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
M+K+GV+PD+ TY+ L+D C+V V++ F
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 328 AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + G PDV YN+IINGL K +EAL L EM
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 133/279 (47%), Gaps = 2/279 (0%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
G++P L T N+LI I A V + G PD T+ L+ GKI
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQG-RGIKPDVVMYNTIID 206
+ + ++ N +++ +I+GL K G AL+L + R P Y +ID
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 207 SLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP 266
L K + A L+ M+ G PN Y+ LI GF G+ A L M + + P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 267 DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
D+ TY++LVD L G+V E + + + G+ PDVV YN +++G + + +A +F
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 327 NAM-SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
N M + RG TPD+++YN +I L M +EA + E+
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 134/293 (45%), Gaps = 35/293 (11%)
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
G++ V + KR + DT T+ T+ K L + G +++A + GF+LN SY
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
LI+ L K + A+E+ RR+ G +P + Y++++ L K + + L EM
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
G+ PNV T++ I G++ +A +L M + PDV TYT+L+DAL K+
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 287 AKNML-----------------------------------AVMIKQGVKPDVVTYNSLMD 311
AK + + M K G PDVVT+ L+D
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 312 GYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
C +A D + M +G P++H+YN +I GL ++ D+AL L M
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 2/254 (0%)
Query: 111 SAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLI 170
S F +AG L + +T + +++ L + GK++ D + + + +Y T+
Sbjct: 103 SYFKSVAGNLNLVHTTETCNY--MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIF 160
Query: 171 NGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS 230
L G A LR+++ G + YN +I L K + + A ++Y M+ +G
Sbjct: 161 KSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFR 220
Query: 231 PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNM 290
P++ TYS+L+ G + +GLL EM + P+VYT+TI + LG+ GK+ EA +
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 291 LAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
L M +G PDVVTY L+D C +++ A++VF M PD +Y +++
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 351 IKMADEALNLLAEM 364
+ D +EM
Sbjct: 341 NRDLDSVKQFWSEM 354
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 2/239 (0%)
Query: 38 NPGDAIS-HFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTM 96
N DA+ +++ M +P + ++ L K+ A L M G +P+
Sbjct: 870 NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY 929
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
NILIN + G+ ++A ++ ++K G +PD T++ L+ LC+ G++ L + ++
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQ-GRGIKPDVVMYNTIIDSLCKDKLVS 215
G + V Y +INGL K AL L ++ RGI PD+ YN++I +L +V
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
A +Y+E+ G+ PNV T++ALI G+ + G+ + A + M P+ TY L
Sbjct: 1050 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 173/360 (48%), Gaps = 38/360 (10%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A + FN + + + ++ + ++++ + Y A+++ +ME G KP+L+T N+++N
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 102 CYCHLGQ-INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKI-QRALQFHDDVLAQGF 159
+ +G N S++ + G PD T+ TLI C G + Q A Q +++ A GF
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGF 310
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
++V+Y L++ K A+++L + G P +V YN++I + +D ++ A +
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME 370
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM---GLK-------------- 262
L ++M KG P+V TY+ L+ GF G+++ A+ + +EM G K
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYG 430
Query: 263 ------------------NIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
+ PD+ T+ L+ G+ G E + M + G P+
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
T+N+L+ Y +A V+ M G TPD+ +YN ++ L + M +++ +LAEM
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 155/359 (43%), Gaps = 35/359 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ N+M + + P +F + +L+ + +A+S+ +M G KP++ T N I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
Y + G+ + I G PD +T+ TL+ +G ++ GF+
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ ++ TLI+ + G A+ + RR+ G+ PD+ YNT++ +L + + + +
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQ-------------------------------- 248
+EM PN +TY +L++ + +
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 249 ---LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
L +A E+ + PD+ T +V G+ V +A +L M ++G P + T
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 666
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YNSLM + + K++++ + +G PD+ SYN +I C+ +A + +EM
Sbjct: 667 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 128/249 (51%), Gaps = 1/249 (0%)
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
I+I+ G+++SA ++ G+ + G+ D ++T+LI G+ + A+ +
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 158 GFLLNQVSYGTLINGLCKLGETSAAL-ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
G ++Y ++N K+G + L+ +++ GI PD YNT+I + L
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A ++ EM A G S + VTY+AL+ + + K+A+ +L+EM L P + TY L+
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
A ++G + EA + M ++G KPDV TY +L+ G+ +V A +F M G P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 337 DVHSYNIII 345
++ ++N I
Sbjct: 418 NICTFNAFI 426
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 154/339 (45%), Gaps = 35/339 (10%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N +L K+ A+ + ++M G PS+VT N LI+ Y G ++ A + +
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
++G +PD T+TTL+ G GK++ A+ +++ G N ++ I G+ +
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
+++ I G+ PD+V +NT++ ++ + S ++ EM G P T++ LI
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
+ G +QA+ + M + PD+ TY ++ AL + G +++ +LA M K
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 301 PDVVTYNSLMDGYCLVNEVN-----------------------------------KAQDV 325
P+ +TY SL+ Y E+ +A+
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 326 FNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
F+ + +RG +PD+ + N +++ + +M +A +L M
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 144/310 (46%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
+P I +N +L + S + +M+ G P T N LI+ Y G A +
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
V +L G PD T+ T++ L G +++ + ++ N+++Y +L++
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
E L + I+P V+ T++ K L+ A +SE+ +G SP++
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
T ++++ + + +A G+LD M + P + TY L+ + +++ +L +
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
+ +G+KPD+++YN+++ YC + A +F+ M G PDV +YN I M
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750
Query: 355 DEALNLLAEM 364
+EA+ ++ M
Sbjct: 751 EEAIGVVRYM 760
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 145/312 (46%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M + P FN ++++ + + A+++ +M G+ P L T N ++
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G + VLA + +P+ +T+ +L+ +I ++V + V
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
TL+ K A ++ RG PD+ N+++ + ++V+ A + M
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
+G +P++ TY++L+Y ++ +L E+ K I PD+ +Y ++ A + ++R
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
+A + + M G+ PDV+TYN+ + Y + +A V M + G P+ ++YN I+
Sbjct: 717 DASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 346 NGLCKIKMADEA 357
+G CK+ DEA
Sbjct: 777 DGYCKLNRKDEA 788
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 126/252 (50%), Gaps = 13/252 (5%)
Query: 121 KRGYQP--DTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
++ YQ D +I L G++ A + + GF L+ SY +LI+ G
Sbjct: 164 QKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGR 223
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCK-----DKLVSHAFDLYSEMVAKGISPNV 233
A+ + ++++ G KP ++ YN I++ K +K+ S L +M + GI+P+
Sbjct: 224 YREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITS----LVEKMKSDGIAPDA 279
Query: 234 VTYSALIYGFCIVGQLKQ-AIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLA 292
TY+ LI C G L Q A + +EM D TY L+D GK + +EA +L
Sbjct: 280 YTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLN 338
Query: 293 VMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIK 352
M+ G P +VTYNSL+ Y +++A ++ N M+++G PDV +Y +++G +
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG 398
Query: 353 MADEALNLLAEM 364
+ A+++ EM
Sbjct: 399 KVESAMSIFEEM 410
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 150/342 (43%), Gaps = 35/342 (10%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P +A+ N M+ +P I +N ++++ + A+ L +QM G KP + T
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
L++ + G++ SA S+ + G +P+ TF IK GK ++ D++ G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
+ V++ TL+ + G S + + ++ G P+ +NT+I + + A
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+Y M+ G++P++ TY+ ++ G +Q+ +L EM P+ TY L+ A
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 279 --GKE-------------GKVR--------------------EAKNMLAVMIKQGVKPDV 303
GKE G + EA+ + + ++G PD+
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
T NS++ Y V KA V + M +RG TP + +YN ++
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 140/282 (49%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A++ + RML TP + +N VL +L + + + + +ME KP+ +T L++
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y + +I S+ + +P + TL+ + A + ++ +GF
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ + ++++ + + A +L ++ RG P + YN+++ + + ++
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
E++AKGI P++++Y+ +IY +C +++ A + EM I PDV TY + + +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ 323
EA ++ MIK G +P+ TYNS++DGYC +N ++A+
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 159/311 (51%), Gaps = 2/311 (0%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
STP +F+ + + K + A QM+ G P++ + N ++ G+++ A
Sbjct: 166 STPRVFD--SLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
+ + P+ T ++ G C GK+ + ++ D+ GF VSY TLI G
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
C+ G S+AL+L + G++P+VV +NT+I C+ + A ++ EM A ++PN
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
VTY+ LI G+ G + A ++M I D+ TY L+ L K+ K R+A +
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
+ K+ + P+ T+++L+ G C+ ++ +++ +M + G P+ ++N++++ C+ +
Sbjct: 404 LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED 463
Query: 354 ADEALNLLAEM 364
D A +L EM
Sbjct: 464 FDGASQVLREM 474
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 158/325 (48%), Gaps = 2/325 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A F +M P + N ++SL+ A+ +M I P+ T+N+++
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ YC G+++ +L + + G++ +++ TLI G C G + AL+ + + G
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V++ TLI+G C+ + A ++ ++ + P+ V YNT+I+ + AF
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y +MV GI +++TY+ALI+G C + ++A + E+ +N+ P+ T++ L+
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ MI+ G P+ T+N L+ +C + + A V M +R D +
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Query: 341 YNIIINGLCKIKMADEAL-NLLAEM 364
+ + NGL K + D+ + LL EM
Sbjct: 486 VHQVCNGL-KHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 159/311 (51%), Gaps = 2/311 (0%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
STP +F+ + + K + A QM+ G P++ + N ++ G+++ A
Sbjct: 166 STPRVFD--SLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
+ + P+ T ++ G C GK+ + ++ D+ GF VSY TLI G
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
C+ G S+AL+L + G++P+VV +NT+I C+ + A ++ EM A ++PN
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
VTY+ LI G+ G + A ++M I D+ TY L+ L K+ K R+A +
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
+ K+ + P+ T+++L+ G C+ ++ +++ +M + G P+ ++N++++ C+ +
Sbjct: 404 LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED 463
Query: 354 ADEALNLLAEM 364
D A +L EM
Sbjct: 464 FDGASQVLREM 474
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 158/325 (48%), Gaps = 2/325 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A F +M P + N ++SL+ A+ +M I P+ T+N+++
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ YC G+++ +L + + G++ +++ TLI G C G + AL+ + + G
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V++ TLI+G C+ + A ++ ++ + P+ V YNT+I+ + AF
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y +MV GI +++TY+ALI+G C + ++A + E+ +N+ P+ T++ L+
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ MI+ G P+ T+N L+ +C + + A V M +R D +
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Query: 341 YNIIINGLCKIKMADEAL-NLLAEM 364
+ + NGL K + D+ + LL EM
Sbjct: 486 VHQVCNGL-KHQGKDQLVKKLLQEM 509
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 160/327 (48%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
+P +A+S F++ +M ++ ++ L K++++ + + + ++
Sbjct: 61 DPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFM 120
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI Y G ++ A V I + TLI L +G++++A F D
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
N VS+ LI G + AA ++ + ++P VV YN++I LC++ + A
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L +M+ K I PN VT+ L+ G C G+ +A L+ +M + P + Y IL+
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
LGK G++ EAK +L M K+ +KPDVV YN L++ C V +A V M +G P+
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+Y ++I+G C+I+ D LN+L M
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAM 387
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 134/274 (48%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A S F+ M P FN ++ + + A + +M ++PS+VT N LI
Sbjct: 170 AKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIG 229
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C + A S+L ++K+ +P+ +TF L+KGLC G+ A + D+ +G
Sbjct: 230 FLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKP 289
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
V+YG L++ L K G A LL ++ R IKPDVV+YN +++ LC + V A+ +
Sbjct: 290 GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVL 349
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
+EM KG PN TY +I GFC + + +L+ M P T+ +V L K
Sbjct: 350 TEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKG 409
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCL 315
G + A +L VM K+ + + +L+ C+
Sbjct: 410 GNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCI 443
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 139/288 (48%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
AI + H++ ++ ++N LIN G++ A S G +P++++F LIK
Sbjct: 135 AIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIK 194
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
G + A + D++L + V+Y +LI LC+ + A LL + + I+P
Sbjct: 195 GFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRP 254
Query: 197 DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 256
+ V + ++ LC + A L +M +G P +V Y L+ G++ +A LL
Sbjct: 255 NAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLL 314
Query: 257 DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLV 316
EM + I PDV Y ILV+ L E +V EA +L M +G KP+ TY ++DG+C +
Sbjct: 315 GEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRI 374
Query: 317 NEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + +V NAM P ++ ++ GL K D A +L M
Sbjct: 375 EDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 142/308 (46%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI F+++ I N ++ LV A S + ++P+ V+ NILI
Sbjct: 135 AIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIK 194
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ +A V +L+ QP +T+ +LI LC + + +A +D++ +
Sbjct: 195 GFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRP 254
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N V++G L+ GLC GE + A +L+ ++ RG KP +V Y ++ L K + A L
Sbjct: 255 NAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLL 314
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM + I P+VV Y+ L+ C ++ +A +L EM +K P+ TY +++D +
Sbjct: 315 GEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRI 374
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
N+L M+ P T+ ++ G ++ A V M ++ + ++
Sbjct: 375 EDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAW 434
Query: 342 NIIINGLC 349
+++ LC
Sbjct: 435 QNLLSDLC 442
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G A S M++ P F ++ L Y+ A L ME+ G KP LV IL
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
++ G+I+ A +L + KR +PD + + L+ LC ++ A + ++ +G
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N +Y +I+G C++ + + L +L + P + ++ L K + HA
Sbjct: 358 KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACF 417
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCI 245
+ M K +S + L+ CI
Sbjct: 418 VLEVMGKKNLSFGSGAWQNLLSDLCI 443
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 175/321 (54%), Gaps = 1/321 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFT-GIKPSLVTMNILI 100
A+ +++M+ +P +F + V+ + ++ + A+ + + E + G++ ++VT N LI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N Y +G + VL + +RG + +T+T+LIKG C G ++ A + + + +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+Q YG L++G C+ G+ A+ + + G++ + + N++I+ CK + A +
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+S M + P+ TY+ L+ G+C G + +A+ L D+M K + P V TY IL+ +
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G + ++ +M+K+GV D ++ ++L++ + + N+A ++ + RG D +
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 341 YNIIINGLCKIKMADEALNLL 361
N++I+GLCK++ +EA +L
Sbjct: 509 LNVMISGLCKMEKVNEAKEIL 529
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 145/295 (49%)
Query: 70 KTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTI 129
+T A+ + M G++ + N LIN YC GQ+ A + + + +PD
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 130 TFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRI 189
T+ TL+ G C G + AL+ D + + + ++Y L+ G ++G L L + +
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 190 QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
RG+ D + +T++++L K + A L+ ++A+G+ + +T + +I G C + ++
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 250 KQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
+A +LD + + P V TY L K G ++EA + M ++G+ P + YN+L
Sbjct: 523 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL 582
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ G +NK D+ + RG TP V +Y +I G C I M D+A EM
Sbjct: 583 ISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 156/324 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ + M+++ N ++ K+ A + +M +KP T N L+
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ YC G ++ A + + ++ P +T+ L+KG G L +L +G
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+++S TL+ L KLG+ + A++L + RG+ D + N +I LCK + V+ A ++
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ P V TY AL +G+ VG LK+A + + M K I P + Y L+ K
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ + +++ + +G+ P V TY +L+ G+C + ++KA M ++G T +V+
Sbjct: 589 YRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNI 648
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
+ I N L ++ DEA LL ++
Sbjct: 649 CSKIANSLFRLDKIDEACLLLQKI 672
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ-GFLLNQVSYGTLINGLCKLGETSAALE 184
PD T + ++ C G + +A+ F + + G LN V+Y +LING +G+
Sbjct: 223 PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 282
Query: 185 LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
+LR + RG+ +VV Y ++I CK L+ A ++ + K + + Y L+ G+C
Sbjct: 283 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 342
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
GQ++ A+ + D M + + L++ K G++ EA+ + + M +KPD
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
TYN+L+DGYC V++A + + M Q+ P V +YNI++ G +I + L+L M
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 154/343 (44%), Gaps = 39/343 (11%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
N +++ L K + + A + + KP++ T L + Y +G + AF+V +
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
++G P + TLI G + + + ++ A+G +YG LI G C +G
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA---------FDLY---------- 221
A + +GI +V + + I +SL + + A FDL
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEF 688
Query: 222 ----------SEMVAKGIS---------PNVVTYSALIYGFCIVGQLKQAIGLL-DEMGL 261
++ +A+ + PN + Y+ I G C G+L+ A L D +
Sbjct: 689 LEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748
Query: 262 KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
PD YTYTIL+ G + +A + M +G+ P++VTYN+L+ G C + V++
Sbjct: 749 DRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808
Query: 322 AQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
AQ + + + Q+G TP+ +YN +I+GL K EA+ L +M
Sbjct: 809 AQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 26/293 (8%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P I +N +++ K +H + L ++ G+ P++ T LI +C++G I+ A++
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ--VSYGTLING- 172
++++G TL +C KI +L F D + + LL Q V + L+ G
Sbjct: 634 CFEMIEKG--------ITLNVNIC--SKIANSL-FRLDKIDEACLLLQKIVDFDLLLPGY 682
Query: 173 --LCKLGETSAALELLRRIQGRGIK---------PDVVMYNTIIDSLCKDKLVSHAFDLY 221
L + E SA L + ++ P+ ++YN I LCK + A L+
Sbjct: 683 QSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLF 742
Query: 222 SEMVAKG-ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
S++++ P+ TY+ LI+G I G + +A L DEM LK I P++ TY L+ L K
Sbjct: 743 SDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCK 802
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
G V A+ +L + ++G+ P+ +TYN+L+DG V +A + M ++G
Sbjct: 803 LGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 4/182 (2%)
Query: 50 LQMPSTPPIFEF-NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
L +P + EF T+ +KT+ + ++ S + + P+ + N+ I C G+
Sbjct: 677 LLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKL--LVPNNIVYNVAIAGLCKAGK 734
Query: 109 INSAFSVLAGILKRG-YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+ A + + +L + PD T+T LI G + G I +A D++ +G + N V+Y
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYN 794
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
LI GLCKLG A LL ++ +GI P+ + YNT+ID L K V+ A L +M+ K
Sbjct: 795 ALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 854
Query: 228 GI 229
G+
Sbjct: 855 GL 856
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A +L +M GI P++VT N LI C LG ++ A +L + ++G P+ IT+ TLI
Sbjct: 774 AFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLID 833
Query: 137 GLCLHGKIQRALQFHDDVLAQGFL 160
GL G + A++ + ++ +G +
Sbjct: 834 GLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 47/200 (23%)
Query: 201 YNTIIDSLCKDKLVSHA-FDLYSEMVA--KGISPNVVTYSALIYGFCIVGQLKQAIGLLD 257
Y LC+ ++H+ F ++ E+V K S + + ++ + G +K A+ + D
Sbjct: 120 YQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFD 179
Query: 258 EMG-----------------------------------LKNIDPDVYTYTILVDALGKEG 282
MG + PDV+T +I+V+A + G
Sbjct: 180 NMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSG 239
Query: 283 KVREAKNMLAVMIKQ-----GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
V +A V K+ G++ +VVTYNSL++GY ++ +V V MS+RG + +
Sbjct: 240 NVDKA----MVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRN 295
Query: 338 VHSYNIIINGLCKIKMADEA 357
V +Y +I G CK + +EA
Sbjct: 296 VVTYTSLIKGYCKKGLMEEA 315
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 168/344 (48%), Gaps = 45/344 (13%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ V+ + VK + A+ + +M GI S++ L+N YC ++ A + +
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRME 372
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFH----------------------------- 151
+ G PD + F+ +++ C + ++++A++F+
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPE 432
Query: 152 ----------DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMY 201
+ +A GF+ N++ CK G+ AA L+ ++ +GI+P+VV Y
Sbjct: 433 AALEIFNDSFESWIAHGFMCNKIFLL-----FCKQGKVDAATSFLKMMEQKGIEPNVVFY 487
Query: 202 NTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL 261
N ++ + C+ K + A ++SEM+ KG+ PN TYS LI GF + A ++++M
Sbjct: 488 NNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA 547
Query: 262 KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG-VKPDVVTYNSLMDGYCLVNEVN 320
N + + Y +++ L K G+ +AK ML +IK+ +YNS++DG+ V + +
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTD 607
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
A + + MS+ G++P+V ++ +ING CK D AL + EM
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 165/324 (50%), Gaps = 1/324 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A S F+ ML+ P F ++ ++ K K A + +QM + + + V N +IN
Sbjct: 503 ARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIIN 562
Query: 102 CYCHLGQINSAFSVLAGILK-RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C +GQ + A +L ++K + Y ++ ++I G G A++ + ++ G
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS 622
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V++ +LING CK ALE+ ++ +K D+ Y +ID CK + A+ L
Sbjct: 623 PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+SE+ G+ PNV Y++LI GF +G++ AI L +M I D++TYT ++D L K
Sbjct: 683 FSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLK 742
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G + A ++ + ++ G+ PD + + L++G + KA + M ++ TP+V
Sbjct: 743 DGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLL 802
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y+ +I G + +EA L EM
Sbjct: 803 YSTVIAGHHREGNLNEAFRLHDEM 826
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 169/359 (47%), Gaps = 37/359 (10%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ F M+ P + N VL+SLV++ A + ++M G+ VT +L+
Sbjct: 188 AVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMR 247
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTI-------------------------------- 129
+ A + ++ RG +PD +
Sbjct: 248 ASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVP 307
Query: 130 ----TFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
T+T++I G ++ A++ D+++ G ++ ++ +L+NG CK E AL+L
Sbjct: 308 ASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDL 367
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
R++ G+ PD VM++ +++ CK+ + A + Y M + I+P+ V +I G C+
Sbjct: 368 FNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CL 426
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
+ +A + ++ + + K+GKV A + L +M ++G++P+VV
Sbjct: 427 KAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVF 486
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN++M +C + ++ A+ +F+ M ++G P+ +Y+I+I+G K K A +++ +M
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM 545
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 129/252 (51%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N ++ VK +A+ +M G P++VT LIN +C +++ A + +
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ D + LI G C ++ A ++ G + N Y +LI+G LG+
Sbjct: 653 SMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
AA++L +++ GI D+ Y T+ID L KD ++ A DLYSE++ GI P+ + + L+
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLV 772
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G GQ +A +L+EM K++ P+V Y+ ++ +EG + EA + M+++G+
Sbjct: 773 NGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Query: 301 PDVVTYNSLMDG 312
D +N L+ G
Sbjct: 833 HDDTVFNLLVSG 844
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 114/234 (48%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ + M + +P + F ++ K+ A+ ++H+M+ +K L LI+
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+C + +A+++ + + + G P+ + +LI G GK+ A+ + ++ G
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +Y T+I+GL K G + A +L + GI PD +++ +++ L K A +
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML 788
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
EM K ++PNV+ YS +I G G L +A L DEM K I D + +LV
Sbjct: 789 EEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 128/275 (46%), Gaps = 1/275 (0%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
G + + N L+N Y +++ A ++ R P ++ L I A
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
+ ++ ++ G + V+ L+ + + A+++ RR+ RG +PD ++++ + +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 208 LCKDKLVSHAFDLYSEMVAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP 266
CK + A DL EM K G+ + TY+++I F G +++A+ ++DEM I
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 267 DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
V T LV+ K ++ +A ++ M ++G+ PD V ++ +++ +C E+ KA + +
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 327 NAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
M P + +I G K + + AL +
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIF 438
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 146/339 (43%), Gaps = 35/339 (10%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
FN +L + ++ K A+ M + P + +N +++ I+ A + ++
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G D +T L++ K + A++ V+++G + + + + CK +
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 181 AALELLRRIQGR-GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
AL+LLR ++G+ G+ Y ++I + K+ + A + EMV GI +V+ ++L
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
+ G+C +L +A+ L + M + + PD ++++V+ K ++ +A M +
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 300 KPDVVTYNSLMDG----------------------------------YCLVNEVNKAQDV 325
P V ++++ G +C +V+ A
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSF 471
Query: 326 FNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M Q+G P+V YN ++ C++K D A ++ +EM
Sbjct: 472 LKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM 510
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 64/131 (48%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI + +M+ + +F + ++ L+K + + A L ++ GI P + +L+N
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
GQ A +L + K+ P+ + ++T+I G G + A + HD++L +G +
Sbjct: 774 GLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVH 833
Query: 162 NQVSYGTLING 172
+ + L++G
Sbjct: 834 DDTVFNLLVSG 844
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 145/284 (51%), Gaps = 1/284 (0%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHY-STAISLSHQMEFTGIKPSLVTMN 97
P +S F +ML+ TP N++L LV + Y A L G+ P+ + N
Sbjct: 135 PEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYN 194
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+L+ +C ++ A+ + +L+R PD ++ LI+G C G++ A++ DD+L +
Sbjct: 195 LLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNK 254
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
GF+ +++SY TL+N LC+ + A +LL R++ +G PD+V YNT+I C++ A
Sbjct: 255 GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDA 314
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+ +M++ G SPN V+Y LI G C G + L+EM K P LV
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
GKV EA +++ V++K G T+ ++ C +E K
Sbjct: 375 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 418
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 106/188 (56%)
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTY 236
G A EL + + G+ P+ YN ++ + C + +S A+ L+ +M+ + + P+V +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
LI GFC GQ+ A+ LLD+M K PD +YT L+++L ++ ++REA +L M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADE 356
+G PD+V YN+++ G+C + A+ V + M G +P+ SY +I GLC M DE
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 357 ALNLLAEM 364
L EM
Sbjct: 349 GKKYLEEM 356
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLH-GKIQRALQFHDDVLAQ 157
LI Y S +L+ + P ++ L H G +Q+A +
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + N SY L+ C + S A +L ++ R + PDV Y +I C+ V+ A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+L +M+ KG P+ ++Y+ L+ C QL++A LL M LK +PD+ Y ++
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
+E + +A+ +L M+ G P+ V+Y +L+ G C ++ + M +G +P
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 338 VHSYNIIINGLCKIKMADEALNLL 361
N ++ G C +EA +++
Sbjct: 365 FSVSNCLVKGFCSFGKVEEACDVV 388
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 159/321 (49%), Gaps = 4/321 (1%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
M +M +P +N ++ L + A+ L + M GI+P+ VT NI+++ C G
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 108 QI-NSAFSVLAGIL--KRGYQPDTITFTTLIKGLCL-HGKIQRALQFHDDVLAQGFLLNQ 163
I N+ +L IL + P I T++ C +G + +AL+ ++ + +
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 164 VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
V Y +I GLC G AA + + RG+ PDV YNT+I +LCK+ A DL+
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGK 283
M G++P+ ++Y +I G CI G + +A L M ++ P+V + +++D G+ G
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420
Query: 284 VREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNI 343
A ++L +M+ GVKP+V T N+L+ GY + A V N M PD +YN+
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480
Query: 344 IINGLCKIKMADEALNLLAEM 364
++ C + A L EM
Sbjct: 481 LLGAACTLGHLRLAFQLYDEM 501
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 157/294 (53%), Gaps = 6/294 (2%)
Query: 76 TAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLI 135
A+ L +M ++G+ P L+T N L+N C G I A ++ + + G P+ +++ TLI
Sbjct: 139 AALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLI 198
Query: 136 KGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK---LGETSAAL--ELLRRIQ 190
KGLC + +AL + + G N+V+ +++ LC+ +G + L E+L Q
Sbjct: 199 KGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQ 258
Query: 191 GRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLK 250
D+V+ ++DS K+ V A +++ EM K + + V Y+ +I G C G +
Sbjct: 259 ANA-PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMV 317
Query: 251 QAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
A G + +M + ++PDV+TY L+ AL KEGK EA ++ M GV PD ++Y ++
Sbjct: 318 AAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVII 377
Query: 311 DGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
G C+ +VN+A + +M + P+V +N++I+G + AL++L M
Sbjct: 378 QGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLM 431
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 148/294 (50%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
++ S K + A+ + +M + V N++I C G + +A+ + ++KRG
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
PD T+ TLI LC GK A H + G +Q+SY +I GLC G+ + A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
E L + + P+V+++N +ID + S A + + M++ G+ PNV T +ALI+G+
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
G+L A + +EM I PD TY +L+ A G +R A + M+++G +PD+
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
+TY L+ G C + KA+ + + + G T D + I+ +++ EA
Sbjct: 511 ITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 139/276 (50%), Gaps = 3/276 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N ++ L + + A M G+ P + T N LI+ C G+ + A + +
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G PD I++ +I+GLC+HG + RA +F +L L + + +I+G + G+TS
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
+AL +L + G+KP+V N +I K + A+ + +EM + I P+ TY+ L+
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
C +G L+ A L DEM + PD+ TYT LV L +G++++A+++L+ + G+
Sbjct: 483 GAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGIT 542
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFN---AMSQRG 333
D V + L Y + +A V+ A RG
Sbjct: 543 IDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRG 578
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 39/257 (15%)
Query: 132 TTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQG 191
+++++ LCL GK+ AL ++ G + +++ L+NGLCK G A L+R ++
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 192 RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC------- 244
G P+ V YNT+I LC V A L++ M GI PN VT + +++ C
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 245 --------------------IV------------GQLKQAIGLLDEMGLKNIDPDVYTYT 272
IV G + QA+ + EM KN+ D Y
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 273 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR 332
+++ L G + A + M+K+GV PDV TYN+L+ C + ++A D+ M
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 333 GETPDVHSYNIIINGLC 349
G PD SY +II GLC
Sbjct: 365 GVAPDQISYKVIIQGLC 381
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 105/238 (44%), Gaps = 39/238 (16%)
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+ +++ LC G+ AAL L +++ G+ P ++ +N +++ LCK + A L EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP------------------- 266
G SPN V+Y+ LI G C V + +A+ L + M I P
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 267 --------------------DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
D+ TIL+D+ K G V +A + M ++ V D V Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
N ++ G C + A M +RG PDV +YN +I+ LCK DEA +L M
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + +N V+ + S+A+S+ + M G+KP++ T N LI+ Y G++ A+ V
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ PDT T+ L+ C G ++ A Q +D++L +G + ++Y L+ GLC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA---KGIS-P 231
G A LL RIQ GI D V + + + + A+ +Y + +A +G+S P
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGVSCP 582
Query: 232 NVVTY 236
+++ +
Sbjct: 583 SILNH 587
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+S N ML P ++ N ++ VK A + ++M T I P T N+L+
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C LG + AF + +L+RG QPD IT+T L++GLC G++++A + A G +
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Query: 162 NQVSYGTLINGLCKL---GETSAALELLRRIQGRGI 194
+ V + L +L GE + + RG+
Sbjct: 544 DHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGV 579
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 39/189 (20%)
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
++++I+ LC + A L +M+ G+ P ++T++ L+ G C G +++A GL+ EM
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC----- 314
P+ +Y L+ L V +A + M K G++P+ VT N ++ C
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 315 ------LVNE----------------------------VNKAQDVFNAMSQRGETPDVHS 340
L+ E V +A +V+ MSQ+ D
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 341 YNIIINGLC 349
YN+II GLC
Sbjct: 303 YNVIIRGLC 311
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 160/311 (51%), Gaps = 11/311 (3%)
Query: 59 FEFNKVLTS-----LVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
FEF+ V S K A+ +M G+ +V+ +ILI+ G + A
Sbjct: 238 FEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEAL 297
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
+L ++K G +P+ IT+T +I+GLC GK++ A + +L+ G +++ Y TLI+G+
Sbjct: 298 GLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGI 357
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
C+ G + A +L ++ RGI+P ++ YNT+I+ LC VS A + V+KG+ +V
Sbjct: 358 CRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDV 412
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
+TYS L+ + V + + + I D+ IL+ A G EA +
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
M + + PD TY +++ GYC ++ +A ++FN + + + V YN II+ LCK M
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGM 531
Query: 354 ADEALNLLAEM 364
D A +L E+
Sbjct: 532 LDTATEVLIEL 542
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 160/311 (51%), Gaps = 43/311 (13%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG--YQPDTITFTTLIKGLCLHGKIQ 145
G PS +T LI + G++++A VL + + Y D + +I G C GK +
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 146 RALQFHDDVLAQGFLL-NQVSYGTLINGLCKLGETSAALELLRRIQG------------- 191
AL F + + G L+ N V+Y TL++ LC+LG+ +L+RR++
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 192 ----------------------RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGI 229
+G+ DVV Y+ +ID L K+ V A L +M+ +G+
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 230 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKN 289
PN++TY+A+I G C +G+L++A L + + I+ D + Y L+D + ++G + A +
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 290 MLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
ML M ++G++P ++TYN++++G C+ V++A +V +G DV +Y+ +++
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYI 423
Query: 350 KIKMADEALNL 360
K++ D L +
Sbjct: 424 KVQNIDAVLEI 434
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 156/309 (50%), Gaps = 5/309 (1%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + + ++++L + L ++E G + V + I+ Y G + A
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
++++G D ++++ LI GL G ++ AL ++ +G N ++Y +I GLCK
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
+G+ A L RI GI+ D +Y T+ID +C+ ++ AF + +M +GI P+++T
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+ +I G C+ G++ +A DE+ K + DV TY+ L+D+ K + + +
Sbjct: 385 YNTVINGLCMAGRVSEA----DEVS-KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL 439
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
+ + D+V N L+ + L+ +A ++ AM + TPD +Y +I G CK +
Sbjct: 440 EAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIE 499
Query: 356 EALNLLAEM 364
EAL + E+
Sbjct: 500 EALEMFNEL 508
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 149/308 (48%), Gaps = 6/308 (1%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ M++ + ++ ++ L K + A+ L +M G++P+L+T +I
Sbjct: 260 DALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAII 319
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C +G++ AF + IL G + D + TLI G+C G + RA D+ +G
Sbjct: 320 RGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ ++Y T+INGLC G S A E+ +G+ DV+ Y+T++DS K + + ++
Sbjct: 380 PSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEI 434
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ I ++V + L+ F ++G +A L M ++ PD TY ++ K
Sbjct: 435 RRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCK 494
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G++ EA M + K V V YN ++D C ++ A +V + ++G D+H+
Sbjct: 495 TGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHT 553
Query: 341 YNIIINGL 348
+++ +
Sbjct: 554 SRTLLHSI 561
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 169/361 (46%), Gaps = 39/361 (10%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G+A + + M +M TP + ++ KT A+ + +++ + + + V N +
Sbjct: 464 GEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAA-VCYNRI 522
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHG--KIQRALQFHDDVLAQ 157
I+ C G +++A VL + ++G D T TL+ + +G K L + + L
Sbjct: 523 IDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNS 582
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGI----------------------- 194
L ++ L+ LCK G AA+E+ ++ +G+
Sbjct: 583 DVCLGMLNDAILL--LCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYL 640
Query: 195 -----------KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
DV+ Y II+ LCK+ + A +L S ++G++ N +TY++LI G
Sbjct: 641 LVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGL 700
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
C G L +A+ L D + + P TY IL+D L KEG +A+ +L M+ +G+ P++
Sbjct: 701 CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 760
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
+ YNS++DGYC + + A V + TPD + + +I G CK +EAL++ E
Sbjct: 761 IIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 820
Query: 364 M 364
Sbjct: 821 F 821
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 140/273 (51%), Gaps = 6/273 (2%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N +A+ +M++ P + + ++ L K A L +++ GI+
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 351
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI+ C G +N AFS+L + +RG QP +T+ T+I GLC+ G++ A D +++
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSK 406
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + + ++Y TL++ K+ A LE+ RR I D+VM N ++ + A
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
LY M ++P+ TY+ +I G+C GQ+++A+ + +E+ ++ V Y ++DA
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDA 525
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
L K+G + A +L + ++G+ D+ T +L+
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLL 558
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 140/285 (49%), Gaps = 13/285 (4%)
Query: 51 QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIK---PSLVTMNILINCY---C 104
Q+ S + N + L K + AI + M G+ PS + ++ N
Sbjct: 579 QLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDA 638
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
+L +N+ + L+ + D I +T +I GLC G + +AL ++G LN +
Sbjct: 639 YLLVVNAGETTLSSM-------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTI 691
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y +LINGLC+ G AL L ++ G+ P V Y +ID+LCK+ L A L M
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
V+KG+ PN++ Y++++ G+C +GQ + A+ ++ + + PD +T + ++ K+G +
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDM 811
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
EA ++ + + D + L+ G+C + +A+ + M
Sbjct: 812 EEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 130/245 (53%), Gaps = 3/245 (1%)
Query: 123 GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG--FLLNQVSYGTLINGLCKLGETS 180
G P ++TF +LI G++ A++ + + + + + +I+G CK+G+
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 181 AALELLRRIQGRGI-KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
AL G+ P++V Y T++ +LC+ V DL + +G + V YS
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I+G+ G L A+ EM K ++ DV +Y+IL+D L KEG V EA +L MIK+GV
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
+P+++TY +++ G C + ++ +A +FN + G D Y +I+G+C+ + A +
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 360 LLAEM 364
+L +M
Sbjct: 369 MLGDM 373
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 112/203 (55%)
Query: 93 LVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHD 152
++ I+IN C G + A ++ + RG +TIT+ +LI GLC G + AL+ D
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 153 DVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDK 212
+ G + ++V+YG LI+ LCK G A +LL + +G+ P++++YN+I+D CK
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 213 LVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYT 272
A + S + ++P+ T S++I G+C G +++A+ + E KNI D + +
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 273 ILVDALGKEGKVREAKNMLAVMI 295
L+ +G++ EA+ +L M+
Sbjct: 835 FLIKGFCTKGRMEEARGLLREML 857
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 104 CHLGQINSAFSVLAGILKRGYQPDTITF-TTLIKGLCLHGKIQRALQFHDDVLAQGFL-- 160
C G +A V + ++G T+TF +T++K L + R+L + V+ G
Sbjct: 597 CKRGSFEAAIEVYMIMRRKGL---TVTFPSTILKTLVDN---LRSLDAYLLVVNAGETTL 650
Query: 161 --LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
++ + Y +INGLCK G AL L + RG+ + + YN++I+ LC+ + A
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
L+ + G+ P+ VTY LI C G A LLD M K + P++ Y +VD
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
K G+ +A +++ + V PD T +S++ GYC ++ +A VF + + D
Sbjct: 771 CKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADF 830
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
+ +I G C +EA LL EM
Sbjct: 831 FGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 149/325 (45%), Gaps = 37/325 (11%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
S+ + ++ ++ L K A++L + G+ + +T N LIN C G + A
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
+ + G P +T+ LI LC G A + D ++++G + N + Y ++++G
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
Query: 174 CKLGETSAALELL-RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPN 232
CKLG+T A+ ++ R++ GR + PD +++I CK + A +++E K IS +
Sbjct: 771 CKLGQTEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Query: 233 VVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLA 292
+ LI GFC G++++A GLL EM + V VDA E + + L
Sbjct: 830 FFGFLFLIKGFCTKGRMEEARGLLREM---LVSESVVKLINRVDAELAESE--SIRGFLV 884
Query: 293 VMIKQGVKPDVV------------------TYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+ +QG P + +Y L +N+VN+ + + ++
Sbjct: 885 ELCEQGRVPQAIKILDEISSTIYPSGKNLGSYQRLQ----FLNDVNEEE-----IKKKDY 935
Query: 335 TPDVHSYNIIINGLC---KIKMADE 356
D HS + ++ LC K++ A+E
Sbjct: 936 VHDFHSLHSTVSSLCTSGKLEQANE 960
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 49/302 (16%)
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+ +S L +LK G+ P + ++ L K LQF+ + ++ +N Y
Sbjct: 6 RTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS 65
Query: 168 TLINGLCKLGETSAALELLR-RIQGRGIKPDVVMYNTIID--SLCKDKLVSHAFDLYSEM 224
+ L A + + I I P M +++I S+ +D L +
Sbjct: 66 IVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCL 125
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID------------------- 265
G P+ +T+ +LIY F G++ AI +L+ M KN++
Sbjct: 126 RNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIG 185
Query: 266 -------------------PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
P++ TYT LV AL + GKV E ++++ + +G + D V Y
Sbjct: 186 KPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFY 245
Query: 307 NSLMDGY----CLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLA 362
++ + GY LV+ + + ++ M ++G DV SY+I+I+GL K +EAL LL
Sbjct: 246 SNWIHGYFKGGALVDALMQDRE----MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLG 301
Query: 363 EM 364
+M
Sbjct: 302 KM 303
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 44/229 (19%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F+ + + P + ++ +L K + A L M G+ P+++ N ++
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL----QFHDDVLA 156
+ YC LGQ A V++ + PD T +++IKG C G ++ AL +F D ++
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
F + LI G C G A LLR +
Sbjct: 828 ADFF----GFLFLIKGFCTKGRMEEARGLLREM--------------------------- 856
Query: 217 AFDLYSEMVAKGIS--PNVVTYSALIYGF----CIVGQLKQAIGLLDEM 259
L SE V K I+ + S I GF C G++ QAI +LDE+
Sbjct: 857 ---LVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEI 902
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 28/286 (9%)
Query: 94 VTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDD 153
V N+ + LG++ AF +L + RG PD I +TTLI G CL GK+ AL D+
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Query: 154 VLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
++ G + ++Y L++GL + G LE+ R++ G KP+ V + II+ LC +
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARK 508
Query: 214 VSHAFDLYSEMVAK---------------GISPNVV-------------TYSALIYGFCI 245
V A D +S + K G+S Y L + CI
Sbjct: 509 VKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCI 568
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G L++A +L +M ++P ++ A K VREA+ + M+++G+ PD+ T
Sbjct: 569 EGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFT 628
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
Y ++ YC +NE+ KA+ +F M QRG PDV +Y ++++ K+
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKL 674
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 137/262 (52%), Gaps = 4/262 (1%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
+ +++ +C+ ++ +A SV+ + + G+ D +I C + + AL F D +L
Sbjct: 286 LGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKML 345
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
+G +N V ++ CK+ ALE + + I D V YN D+L K V
Sbjct: 346 GKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVE 405
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
AF+L EM +GI P+V+ Y+ LI G+C+ G++ A+ L+DEM + PD+ TY +LV
Sbjct: 406 EAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLV 465
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
L + G E + M +G KP+ VT + +++G C +V +A+D F+++ Q+
Sbjct: 466 SGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK--C 523
Query: 336 PDVHSYNIIINGLCKIKMADEA 357
P+ + + G C+ ++ +A
Sbjct: 524 PENKAS--FVKGYCEAGLSKKA 543
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 166/337 (49%), Gaps = 20/337 (5%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ + M+ +P + +N +++ L + H + + +M+ G KP+ VT +++I
Sbjct: 441 DALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVII 500
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C ++ A + + ++ P+ + +KG C G ++A + + +
Sbjct: 501 EGLCFARKVKEAEDFFSSLEQKC--PENKA--SFVKGYCEAGLSKKA---YKAFVRLEYP 553
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
L + Y L LC G A ++L+++ ++P M +I + CK V A L
Sbjct: 554 LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVL 613
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ MV +G+ P++ TY+ +I+ +C + +L++A L ++M + I PDV TYT+L+D K
Sbjct: 614 FDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLK 673
Query: 281 -----------EGKV--REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
+G+V R+A +L G+ DVV Y L+D C +N + +A ++F+
Sbjct: 674 LDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFD 733
Query: 328 AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M G PD+ +Y +I+ + D A+ L+ E+
Sbjct: 734 RMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 140/290 (48%), Gaps = 9/290 (3%)
Query: 78 ISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKG 137
++L Q++ G+ + T I++ C G + A +L + T I G
Sbjct: 201 MTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFING 254
Query: 138 LCLHGKIQRALQFHDDVLAQGFLLN---QVSYGTLINGLCKLGETSAALELLRRIQGRGI 194
LC+ G+ ++A+ +++ + +L + G ++ G C + AA ++ ++ G
Sbjct: 255 LCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGF 314
Query: 195 KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIG 254
DV +ID CK+ + A +M+ KG+ N V S ++ +C + +A+
Sbjct: 315 GLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALE 374
Query: 255 LLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC 314
E NI D Y + DAL K G+V EA +L M +G+ PDV+ Y +L+DGYC
Sbjct: 375 KFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYC 434
Query: 315 LVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
L +V A D+ + M G +PD+ +YN++++GL + +E L + M
Sbjct: 435 LQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERM 484
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 130/276 (47%), Gaps = 3/276 (1%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPD---TITFTTLIKGLCLHGKIQRAL 148
S+ IN C G+ A +++ ++ R Y +++G C K++ A
Sbjct: 244 SVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAE 303
Query: 149 QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
++ GF L+ + +I+ CK AL L ++ G+G+K + V+ + I+
Sbjct: 304 SVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCY 363
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
CK + A + + E I + V Y+ +G++++A LL EM + I PDV
Sbjct: 364 CKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDV 423
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
YT L+D +GKV +A +++ MI G+ PD++TYN L+ G + +++
Sbjct: 424 INYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYER 483
Query: 329 MSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M G P+ + ++II GLC + EA + + +
Sbjct: 484 MKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL 519
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 14/230 (6%)
Query: 63 KVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKR 122
K+ SL + A + +M ++P +I +C L + A + +++R
Sbjct: 561 KLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER 620
Query: 123 GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKL------ 176
G PD T+T +I C ++Q+A +D+ +G + V+Y L++ KL
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHE 680
Query: 177 -----GET--SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGI 229
GE A E+LR GI DVV Y +ID CK + A +L+ M+ G+
Sbjct: 681 TCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Query: 230 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLK-NIDPDVYTYTILVDAL 278
P++V Y+ LI + G + A+ L+ E+ K NI + + + AL
Sbjct: 741 EPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAAL 790
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 151/293 (51%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P IF ++ L+++ T A ++ ++ G+ P V +I+ YC+LG+ + AF
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+LK G P T T LI G I A ++ +G L+ V+Y L++G K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
+ + EL+ ++ GI PDV YN +I S+ + A ++ SE++ +G P+ +
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++ +I GF G ++A L M + PDV T + L+ K ++ +A + ++
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL 610
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
G+KPDVV YN+L+ GYC V ++ KA ++ M QRG P+ +++ ++ GL
Sbjct: 611 DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 144/288 (50%), Gaps = 3/288 (1%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
AI L H ++P++ + ++ C G + A ++ I + G PD + +TT+I
Sbjct: 360 AIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
G C G+ +A Q+ +L G + + LI + G S A + R ++ G+K
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 197 DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 256
DVV YN ++ K ++ F+L EM + GISP+V TY+ LI+ + G + +A ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 257 DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLV 316
E+ + P +T ++ K G +EA + M +KPDVVT ++L+ GYC
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 317 NEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ KA +FN + G PDV YN +I+G C + ++A L+ M
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 147/269 (54%), Gaps = 3/269 (1%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
+++ I YC G + + +L G+ G +PD + FT I LC G ++ A +
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
G + VS ++I+G CK+G+ A++L+ + ++P++ +Y++ + ++C +
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDML 390
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A ++ E+ G+ P+ V Y+ +I G+C +G+ +A + P + T TIL+
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
A + G + +A+++ M +G+K DVVTYN+LM GY +++NK ++ + M G +
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
PDV +YNI+I+ + DEA +++E+
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISEL 539
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 134/270 (49%), Gaps = 5/270 (1%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKG-LCLHGKIQRALQFHDDV 154
+ILI+C ++N A + + + G P +L+K L +HG ++ A +F + +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHG-LELAREFVEHM 262
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
L++G LN I C G ELL ++ GI+PD+V + ID LCK +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
A + ++ GIS + V+ S++I GFC VG+ ++AI L+ L+ P+++ Y+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSF 379
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+ + G + A + + + G+ PD V Y +++DGYC + +KA F A+ + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 335 TPDVHSYNIIINGLCKIKMADEALNLLAEM 364
P + + I+I + +A ++ M
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNM 469
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 126/242 (52%), Gaps = 2/242 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A +F +L+ + P + ++ + + S A S+ M+ G+K +VT N L++
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y Q+N F ++ + G PD T+ LI + + G I A + +++ +GF+
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +++ +I G K G+ A L + +KPDVV + ++ CK + + A L+
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
++++ G+ P+VV Y+ LI+G+C VG +++A L+ M + + P+ T+ LV LG E
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV--LGLE 664
Query: 282 GK 283
GK
Sbjct: 665 GK 666
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA S F M + +N ++ KT + L +M GI P + T NILI
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ G I+ A +++ +++RG+ P T+ FT +I G G Q A +
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+ L++G CK A+ L ++ G+KPDVV+YNT+I C + A +L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 221 YSEMVAKGISPNVVTYSALIYG 242
MV +G+ PN T+ AL+ G
Sbjct: 641 IGLMVQRGMLPNESTHHALVLG 662
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 151/293 (51%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P IF ++ L+++ T A ++ ++ G+ P V +I+ YC+LG+ + AF
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+LK G P T T LI G I A ++ +G L+ V+Y L++G K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
+ + EL+ ++ GI PDV YN +I S+ + A ++ SE++ +G P+ +
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++ +I GF G ++A L M + PDV T + L+ K ++ +A + ++
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL 610
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
G+KPDVV YN+L+ GYC V ++ KA ++ M QRG P+ +++ ++ GL
Sbjct: 611 DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 144/288 (50%), Gaps = 3/288 (1%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
AI L H ++P++ + ++ C G + A ++ I + G PD + +TT+I
Sbjct: 360 AIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
G C G+ +A Q+ +L G + + LI + G S A + R ++ G+K
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 197 DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 256
DVV YN ++ K ++ F+L EM + GISP+V TY+ LI+ + G + +A ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 257 DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLV 316
E+ + P +T ++ K G +EA + M +KPDVVT ++L+ GYC
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 317 NEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ KA +FN + G PDV YN +I+G C + ++A L+ M
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 147/269 (54%), Gaps = 3/269 (1%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
+++ I YC G + + +L G+ G +PD + FT I LC G ++ A +
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
G + VS ++I+G CK+G+ A++L+ + ++P++ +Y++ + ++C +
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDML 390
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A ++ E+ G+ P+ V Y+ +I G+C +G+ +A + P + T TIL+
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
A + G + +A+++ M +G+K DVVTYN+LM GY +++NK ++ + M G +
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
PDV +YNI+I+ + DEA +++E+
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISEL 539
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 134/270 (49%), Gaps = 5/270 (1%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKG-LCLHGKIQRALQFHDDV 154
+ILI+C ++N A + + + G P +L+K L +HG ++ A +F + +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHG-LELAREFVEHM 262
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
L++G LN I C G ELL ++ GI+PD+V + ID LCK +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
A + ++ GIS + V+ S++I GFC VG+ ++AI L+ L+ P+++ Y+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSF 379
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+ + G + A + + + G+ PD V Y +++DGYC + +KA F A+ + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 335 TPDVHSYNIIINGLCKIKMADEALNLLAEM 364
P + + I+I + +A ++ M
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNM 469
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 126/242 (52%), Gaps = 2/242 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A +F +L+ + P + ++ + + S A S+ M+ G+K +VT N L++
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y Q+N F ++ + G PD T+ LI + + G I A + +++ +GF+
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +++ +I G K G+ A L + +KPDVV + ++ CK + + A L+
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
++++ G+ P+VV Y+ LI+G+C VG +++A L+ M + + P+ T+ LV LG E
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV--LGLE 664
Query: 282 GK 283
GK
Sbjct: 665 GK 666
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA S F M + +N ++ KT + L +M GI P + T NILI
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ G I+ A +++ +++RG+ P T+ FT +I G G Q A +
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+ L++G CK A+ L ++ G+KPDVV+YNT+I C + A +L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 221 YSEMVAKGISPNVVTYSALIYG 242
MV +G+ PN T+ AL+ G
Sbjct: 641 IGLMVQRGMLPNESTHHALVLG 662
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 166/327 (50%), Gaps = 4/327 (1%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ +R+ + + P F NK + L+ + ++ + G P + N ++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA-QGF 159
+ C LGQ+ A ++ + + G +PD I++ +LI G C +G I+ A + + A GF
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 160 LLNQ--VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ VS+ +L NG K+ + + + P+VV Y+T ID+ CK + A
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYM-GVMLKCCSPNVVTYSTWIDTFCKSGELQLA 182
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+ M +SPNVVT++ LI G+C G L+ A+ L EM + +V TYT L+D
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
K+G+++ A+ M + M++ V+P+ + Y +++DG+ + + A M +G D
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+ +Y +II+GLC EA ++ +M
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDM 329
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 161/339 (47%), Gaps = 31/339 (9%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P I FN + K K M P++VT + I+ +C G++ A
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ + P+ +TFT LI G C G ++ A+ + ++ LN V+Y LI+G CK
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
GE A E+ R+ ++P+ ++Y TIID + +A ++M+ +G+ ++
Sbjct: 246 KGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITA 305
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y +I G C G+LK+A ++++M ++ PD+ +T +++A K G+++ A NM +I
Sbjct: 306 YGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLI 365
Query: 296 KQGVKPDVVTYNSLMDG-------------YC-----------LVNEVNKAQD------V 325
++G +PDVV ++++DG +C L++ + K D +
Sbjct: 366 ERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERL 425
Query: 326 FNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
F+ +S+ G PD Y I GLCK +A L M
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 162/323 (50%), Gaps = 5/323 (1%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ F+ M + +P + F ++ K A+SL +M + ++VT LI+
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+C G++ A + + +++ +P+++ +TT+I G G A++F +L QG L
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +YG +I+GLC G+ A E++ ++ + PD+V++ T++++ K + A ++Y
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
+++ +G P+VV S +I G GQL +AI ++ YT+L+DAL KE
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTVLIDALCKE 416
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
G E + + + + + G+ PD Y S + G C + A + M Q G D+ +Y
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAY 476
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
+I GL + EA + EM
Sbjct: 477 TTLIYGLASKGLMVEARQVFDEM 499
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 130/262 (49%), Gaps = 5/262 (1%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
+ +A+ +ML I + +++ L A + ME + + P +V
Sbjct: 283 DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFT 342
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
++N Y G++ +A ++ +++RG++PD + +T+I G+ +G++ A+ + A
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA- 401
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
N V Y LI+ LCK G+ L +I G+ PD MY + I LCK + A
Sbjct: 402 ----NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
F L + MV +G+ +++ Y+ LIYG G + +A + DEM I PD + +L+ A
Sbjct: 458 FKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Query: 278 LGKEGKVREAKNMLAVMIKQGV 299
KEG + A ++L M ++G+
Sbjct: 518 YEKEGNMAAASDLLLDMQRRGL 539
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 159/333 (47%), Gaps = 6/333 (1%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEF-NKVLTSLVKTKHYSTAISLSHQM--EFTGIKPSLV 94
N DA S FN + P +F N VL S + + L + +P
Sbjct: 64 NLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRS 123
Query: 95 TMNILINCYCHL--GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHD 152
T IL++ C I++ VL ++ G +PD +T ++ LC G++ A
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 153 DVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGR-GIKPDVVMYNTIIDSLCKD 211
++ + + +Y L+ LCK + E + ++ +KPD+V + +ID++C
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTY 271
K + A L S++ G P+ Y+ ++ GFC + + +A+G+ +M + ++PD TY
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
L+ L K G+V EA+ L M+ G +PD TY SLM+G C E A + M
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 332 RGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
RG P+ +YN +++GLCK ++ D+ + L M
Sbjct: 364 RGCAPNDCTYNTLLHGLCKARLMDKGMELYEMM 396
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 7/278 (2%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLC----LHGK 143
G++P VT +I + C G+++ A ++ + ++ PDT T+ L+K LC LH
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 144 IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
+ + DD + L VS+ LI+ +C A+ L+ ++ G KPD +YNT
Sbjct: 214 YEFVDEMRDDFDVKPDL---VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNT 270
Query: 204 IIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN 263
I+ C S A +Y +M +G+ P+ +TY+ LI+G G++++A L M
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Query: 264 IDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ 323
+PD TYT L++ + ++G+ A ++L M +G P+ TYN+L+ G C ++K
Sbjct: 331 YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGM 390
Query: 324 DVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
+++ M G + + Y ++ L K EA +
Sbjct: 391 ELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 1/257 (0%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQM-EFTGIKPSLVTMNILINCYCHLGQINSA 112
S P + +N +L L K K +M + +KP LV+ ILI+ C+ + A
Sbjct: 190 SPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREA 249
Query: 113 FSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLING 172
+++ + G++PD + T++KG C K A+ + + +G +Q++Y TLI G
Sbjct: 250 MYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 173 LCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPN 232
L K G A L+ + G +PD Y ++++ +C+ A L EM A+G +PN
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
Query: 233 VVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLA 292
TY+ L++G C + + + L + M + + Y LV +L K GKV EA +
Sbjct: 370 DCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
Query: 293 VMIKQGVKPDVVTYNSL 309
+ D Y++L
Sbjct: 430 YAVDSKSLSDASAYSTL 446
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 144/323 (44%), Gaps = 5/323 (1%)
Query: 39 PGDAISHFNRMLQMPST----PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLV 94
P +IS+ +R+L + P + + SL +T A L ++ P
Sbjct: 136 PDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTY 195
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKR-GYQPDTITFTTLIKGLCLHGKIQRALQFHDD 153
T N L+ C ++ + + + +PD ++FT LI +C ++ A+
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 154 VLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
+ GF + Y T++ G C L + S A+ + ++++ G++PD + YNT+I L K
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTI 273
V A MV G P+ TY++L+ G C G+ A+ LL+EM + P+ TY
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNT 375
Query: 274 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
L+ L K + + + +M GVK + Y +L+ +V +A +VF+
Sbjct: 376 LLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSK 435
Query: 334 ETPDVHSYNIIINGLCKIKMADE 356
D +Y+ + L +K A E
Sbjct: 436 SLSDASAYSTLETTLKWLKKAKE 458
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 142/277 (51%), Gaps = 1/277 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N +L+SL + L +M + P + T N L+N YC LG + A + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G PD T+T+ I G C ++ A + ++ G N+VSY LI GL + +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
AL LL +++ P+V Y +ID+LC S A +L+ +M GI P+ Y+ LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
FC L +A GLL+ M + P+V TY L+ K+ V +A +L+ M++Q +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLV 361
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
PD++TYN+L+ G C ++ A + + M + G P+
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 123/234 (52%), Gaps = 1/234 (0%)
Query: 131 FTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQ 190
+ L+ L G ++ + + ++L + ++ TL+NG CKLG A + + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 191 GRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLK 250
G PD Y + I C+ K V AF ++ EM G N V+Y+ LIYG ++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 251 QAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
+A+ LL +M N P+V TYT+L+DAL G+ EA N+ M + G+KPD Y L+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 311 DGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+C + +++A + M + G P+V +YN +I G CK K +A+ LL++M
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKM 355
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 131/268 (48%), Gaps = 1/268 (0%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
N L++ G + + +L+ PD TF TL+ G C G + A Q+ ++
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ 183
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
G + +Y + I G C+ E AA ++ + + G + V Y +I L + K +
Sbjct: 184 AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDE 243
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A L +M PNV TY+ LI C GQ +A+ L +M I PD YT+L+
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
+ + EA +L M++ G+ P+V+TYN+L+ G+C N V+KA + + M ++ P
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVP 362
Query: 337 DVHSYNIIINGLCKIKMADEALNLLAEM 364
D+ +YN +I G C D A LL+ M
Sbjct: 363 DLITYNTLIAGQCSSGNLDSAYRLLSLM 390
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 107/254 (42%), Gaps = 39/254 (15%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ ML+ +P I+ FN ++ K + A + G P T I +C
Sbjct: 143 YTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCR 202
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
++++AF V + + G + +++T LI GL KI AL + N +
Sbjct: 203 RKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRT 262
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPD---------------------------- 197
Y LI+ LC G+ S A+ L +++ GIKPD
Sbjct: 263 YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHML 322
Query: 198 -------VVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLK 250
V+ YN +I CK K V A L S+M+ + + P+++TY+ LI G C G L
Sbjct: 323 ENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLD 381
Query: 251 QA---IGLLDEMGL 261
A + L++E GL
Sbjct: 382 SAYRLLSLMEESGL 395
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 170/329 (51%), Gaps = 4/329 (1%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N DAI + ML + + ++T K +A+ L +ME G P+ VT +
Sbjct: 319 NMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFS 378
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+LI + G++ A + G P T+I+G K + AL+ D+
Sbjct: 379 VLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET 438
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G L N T+++ LCK G+T A ELL +++ RGI P+VV YN ++ C+ K + A
Sbjct: 439 G-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQ-AIGLLDEMGLKNIDPDVYTYTILVD 276
++S ++ KG+ PN TYS LI G C +Q A+ +++ M NI+ + Y +++
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDG-CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556
Query: 277 ALGKEGKVREAKNMLAVMIKQG-VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
L K G+ +A+ +LA MI++ + ++YNS++DG+ E++ A + M G +
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS 616
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
P+V +Y ++NGLCK D+AL + EM
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 163/320 (50%), Gaps = 1/320 (0%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F+ +L+ P + ++ ++ + A+ + + M + I+ + V +IN C
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 106 LGQINSAFSVLAGILK-RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
+GQ + A +LA +++ + +++ ++I G G++ A+ ++++ G N +
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y +L+NGLCK ALE+ ++ +G+K D+ Y +ID CK + A L+SE+
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
+ +G++P+ Y++LI GF +G + A+ L +M + D+ TYT L+D L K+G +
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNL 740
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
A + M G+ PD + Y +++G + K +F M + TP+V YN +
Sbjct: 741 ILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 800
Query: 345 INGLCKIKMADEALNLLAEM 364
I G + DEA L EM
Sbjct: 801 IAGHYREGNLDEAFRLHDEM 820
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 151/288 (52%), Gaps = 1/288 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISL-SHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
+ ++ L K S A L ++ +E + S ++ N +I+ + G+++SA + +
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
G P+ IT+T+L+ GLC + ++ +AL+ D++ +G L+ +YG LI+G CK
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
+A L + G+ P +YN++I + A DLY +M+ G+ ++ TY+ L
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I G G L A L EM + PD YT++V+ L K+G+ + M M K V
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
P+V+ YN+++ G+ +++A + + M +G PD +++I+++G
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 175/362 (48%), Gaps = 43/362 (11%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ N+ML++ P N+ L++LV+ + A L +M G+ VT +L+
Sbjct: 182 AVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMR 241
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTI-------------------------------- 129
+ A VL+ ++RG +PD++
Sbjct: 242 ASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCV 301
Query: 130 ----TFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
T+T++I G + A++ D++L+ G +N V+ +LI G CK + +AL L
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
+++ G P+ V ++ +I+ K+ + A + Y +M G++P+V +I G+
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 246 VGQLKQAIGLLD---EMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD 302
+ ++A+ L D E GL N V+ ++ L K+GK EA +L+ M +G+ P+
Sbjct: 422 GQKHEEALKLFDESFETGLAN----VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 303 VVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLA 362
VV+YN++M G+C ++ A+ VF+ + ++G P+ ++Y+I+I+G + AL ++
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 363 EM 364
M
Sbjct: 538 HM 539
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A++ + M +P + + ++ L K A+ + +M+ G+K + LI+
Sbjct: 603 AVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALID 662
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+C + SA ++ + +L+ G P + +LI G G + AL + +L G
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +Y TLI+GL K G A EL +Q G+ PD ++Y I++ L K ++
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA-LGK 280
EM ++PNV+ Y+A+I G G L +A L DEM K I PD T+ ILV +G
Sbjct: 783 EEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGN 842
Query: 281 EGKVREA 287
VR A
Sbjct: 843 LQPVRAA 849
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 140/305 (45%), Gaps = 2/305 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
FN +L + K + A+ + +QM + P +N ++ + A + + ++
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G D +T L++ K AL+ + +G + + Y + CK + +
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 181 AALELLRRIQGRGI-KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A LLR ++ + + P Y ++I + K + A L EM++ GIS NVV ++L
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I G C L A+ L D+M + P+ T+++L++ K G++ +A M G+
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
P V ++++ G+ + +A +F+ + G +V N I++ LCK DEA
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATE 464
Query: 360 LLAEM 364
LL++M
Sbjct: 465 LLSKM 469
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 1/277 (0%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
G + + N L+N Y Q + A ++ +L+ P + L + A
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
+ + ++A G + V+ L+ + + + ALE+L R RG +PD ++Y+ + +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 208 LCKDKLVSHAFDLYSEMVAKGIS-PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP 266
CK ++ A L EM K + P+ TY+++I G + AI L DEM I
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 267 DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
+V T L+ K + A + M K+G P+ VT++ L++ + E+ KA + +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 327 NAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
M G TP V + II G K + +EAL L E
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 434
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
D + GF +N ++ L+N K +T A++++ ++ + P N + +L +
Sbjct: 152 DSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQR 211
Query: 212 KLVSHAFDLYSEMVA-----------------------------------KGISPNVVTY 236
++ A +LYS MVA +G P+ + Y
Sbjct: 212 NSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLY 271
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGLKNI-DPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
S + C L A LL EM K + P TYT ++ A K+G + +A + M+
Sbjct: 272 SLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
G+ +VV SL+ G+C N++ A +F+ M + G +P+ +++++I K +
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 356 EALNLLAEM 364
+AL +M
Sbjct: 392 KALEFYKKM 400
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 35/205 (17%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A + F+ +L+ P +N +++ + A+ L +M G++ L T
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI+ G + A + + G PD I +T ++
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV---------------------- 766
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
NGL K G+ +++ ++ + P+V++YN +I ++ + A
Sbjct: 767 -------------NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Query: 218 FDLYSEMVAKGISPNVVTYSALIYG 242
F L+ EM+ KGI P+ T+ L+ G
Sbjct: 814 FRLHDEMLDKGILPDGATFDILVSG 838
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 165/330 (50%), Gaps = 11/330 (3%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQM-----EFTGIKPSLVT 95
DA+ +N M++ +P NK +LV ++ + L+++M + +K S V
Sbjct: 167 DAVEIWNAMIRSGVSPD----NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVV 222
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
N LI+ +C G+I A ++ + + K G +PD +T+ L+ + ++RA +++
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELL-RRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
G L+ SY L+ C++ + + ++ RG DVV Y+T+I++ C+
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNT 341
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
A+ L+ EM KG+ NVVTY++LI F G A LLD+M + PD YT +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+D L K G V +A + MI+ + PD ++YNSL+ G C V +A +F M +
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 335 TPDVHSYNIIINGLCKIKMADEALNLLAEM 364
PD ++ II GL + K A + +M
Sbjct: 462 CPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 160/326 (49%), Gaps = 3/326 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F+ M F++N+ + LV+ + A ++ M+ G T + I
Sbjct: 27 NAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFI 86
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ C + + + ++L+ + G+ PD F + LC K+ A+Q ++ +G
Sbjct: 87 SGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGRE 146
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ VSY LINGL + G+ + A+E+ + G+ PD ++ LC + V A+++
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEM 206
Query: 221 YSEMVAKG-ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+E + + + V Y+ALI GFC G++++A L M +PD+ TY +L++
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYY 266
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQD-VFNAMSQRGETPDV 338
++ A+ ++A M++ G++ D +YN L+ +C V+ +K + + M RG DV
Sbjct: 267 DNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DV 325
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
SY+ +I C+ +A L EM
Sbjct: 326 VSYSTLIETFCRASNTRKAYRLFEEM 351
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 35/289 (12%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N +++ K A +L M G +P LVT N+L+N Y + A V+A ++
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 121 KRGYQ-----------------------------------PDTITFTTLIKGLCLHGKIQ 145
+ G Q D ++++TLI+ C +
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTR 342
Query: 146 RALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
+A + +++ +G ++N V+Y +LI + G +S A +LL ++ G+ PD + Y TI+
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 206 DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
D LCK V A+ ++++M+ I+P+ ++Y++LI G C G++ +AI L ++M K
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECC 462
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC 314
PD T+ ++ L + K+ A + M+ +G D ++L+ C
Sbjct: 463 PDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 125/259 (48%), Gaps = 1/259 (0%)
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
G I++A V + Y+ + + I L + + A + D+ GF L +Y
Sbjct: 23 GMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTY 82
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
I+GLCK+ + LL ++ G PD+ +N +D LC++ V A + MV
Sbjct: 83 SRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQ 142
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
+G P+VV+Y+ LI G G++ A+ + + M + PD LV L KV
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL 202
Query: 287 AKNMLAVMIKQG-VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
A M+A IK VK V YN+L+ G+C + KA+ + + MS+ G PD+ +YN+++
Sbjct: 203 AYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Query: 346 NGLCKIKMADEALNLLAEM 364
N M A ++AEM
Sbjct: 263 NYYYDNNMLKRAEGVMAEM 281
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 142/304 (46%), Gaps = 1/304 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ + +LVK+ A+ + +M + + N I + A ++ +
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G+ T++ I GLC K D+ GF+ + ++ ++ LC+ +
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A++ + RG +PDVV Y +I+ L + V+ A ++++ M+ G+SP+ +AL+
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 241 YGFCIVGQLKQAIGLL-DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
G C ++ A ++ +E+ + Y L+ K G++ +A+ + + M K G
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
+PD+VTYN L++ Y N + +A+ V M + G D +SYN ++ C++ D+ N
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 360 LLAE 363
+ +
Sbjct: 312 FMVK 315
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%)
Query: 163 QVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYS 222
+++Y + I L K G A+++ ++ + YN I L ++ A +Y
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 223 EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
+M G S TYS I G C V + LL +M PD++ + + +D L +E
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 283 KVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN 342
KV A M+++G +PDVV+Y L++G +V A +++NAM + G +PD +
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 343 IIINGLCKIKMADEALNLLAE 363
++ GLC + D A ++AE
Sbjct: 189 ALVVGLCHARKVDLAYEMVAE 209
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 84/172 (48%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A F M Q + + ++ + ++ + S A L QM G+ P +
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+++ C G ++ A+ V +++ PD I++ +LI GLC G++ A++ +D+ +
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
+++++ +I GL + + SAA ++ ++ +G D + +T+I + C
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A ++M ++ +P + +L L K+ + A + + M I P ++ N
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI+ C G++ A + + + PD +TF +I GL K+ A + D ++ +
Sbjct: 435 SLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDK 494
Query: 158 GFLLNQVSYGTLINGLCKLG 177
GF L++ TLI C +
Sbjct: 495 GFTLDRDVSDTLIKASCSMS 514
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 147/300 (49%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A++ + ++Q P +N ++ + K ++ L +M+ G++PS T+N +
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYG 517
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C A +L + G++P T L+K LC +G+ A ++ DDV +GFL
Sbjct: 518 CLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLG 577
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ V+ I+GL K LEL R I G PDV+ Y+ +I +LCK A L+
Sbjct: 578 HMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILF 637
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
+EMV+KG+ P V TY+++I G+C G++ + + + M +PDV TYT L+ L
Sbjct: 638 NEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCAS 697
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
G+ EA M + P+ +T+ +L+ G C +A F M ++ PD Y
Sbjct: 698 GRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 138/277 (49%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
I P +++I+INC +++ A ++L I++ G P + + +I+G+C G+ + +
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
L+ ++ G +Q + + L + + AL+LL++++ G +P + ++
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
LC++ A ++ +G ++V +A I G + + + L ++ PD
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
V Y +L+ AL K + EA + M+ +G+KP V TYNS++DG+C E+++
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 328 AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M + + PDV +Y +I+GLC EA+ EM
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEM 710
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 158/347 (45%), Gaps = 28/347 (8%)
Query: 41 DAISHFNRMLQMP-STPPIFEFNKVLTSLVKTKHYSTAISLSH--QMEFTGIKPSLVTMN 97
+A S F+R+ +M P + +N +L ++ K+ S + + +M G T+
Sbjct: 159 EASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLT 218
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
++ YC+ G+ A SV IL RG+ + I+ T L+ C G++ +A + + + +
Sbjct: 219 PVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEER 277
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
LN +Y LI+G K A +L +++ G+ D+ +Y+ +I LCK K + A
Sbjct: 278 DIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMA 337
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD--VYTYTILV 275
LY E+ GI P+ L+ F +L + + E+ + +ID + Y L
Sbjct: 338 LSLYLEIKRSGIPPDRGILGKLLCSFSEESELSR----ITEVIIGDIDKKSVMLLYKSLF 393
Query: 276 DALGKEGKVREA----KNMLAVMIKQGVK--------------PDVVTYNSLMDGYCLVN 317
+ + V EA +N++ GV PD + + +++ N
Sbjct: 394 EGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKAN 453
Query: 318 EVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+V+ A + + + Q G P YN II G+CK ++E+L LL EM
Sbjct: 454 KVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 145/387 (37%), Gaps = 86/387 (22%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
++ S K A L +E I+ + T +LI+ + +I+ AF + + + G
Sbjct: 254 LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMG 313
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDV----------------------------- 154
D + LI GLC H ++ AL + ++
Sbjct: 314 MNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRIT 373
Query: 155 ------------------LAQGFLLNQVSYG--TLINGLCKLGETSAALELLRRIQ--GR 192
L +GF+ N + + + I L E+ E+++ ++ +
Sbjct: 374 EVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNK 433
Query: 193 GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQA 252
I PD + +I+ L K V A L ++V G+ P + Y+ +I G C G+ +++
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 253 IGLLDEMGLKNIDPDVYTY-----------------------------------TILVDA 277
+ LL EM ++P +T T LV
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L + G+ +A L + +G +V + +DG V++ ++F + G PD
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
V +Y+++I LCK EA L EM
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEM 640
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 152/315 (48%), Gaps = 3/315 (0%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N D+ SH ++ P + ++L L K AI + M +GI P
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
L+N C G + A ++ + GY +T+T+ L++GLC+ G + ++LQF + ++ +
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G N +Y L+ K T A++LL I +G +P++V YN ++ CK+ A
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L+ E+ AKG NVV+Y+ L+ C G+ ++A LL EM + P V TY IL+++
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 278 LGKEGKVREAKNMLAVMIK--QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
L G+ +A +L M K + +YN ++ C +V+ + M R
Sbjct: 326 LAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 385
Query: 336 PDVHSYNIIINGLCK 350
P+ +YN I LC+
Sbjct: 386 PNEGTYN-AIGSLCE 399
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 161/329 (48%), Gaps = 10/329 (3%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ + ++ P + +N +LT K A++L ++ G K ++V+ NIL+
Sbjct: 229 EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG-- 158
C C G+ A S+LA + P +T+ LI L HG+ ++ALQ + +++G
Sbjct: 289 RCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE-MSKGNH 347
Query: 159 -FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK-DKLVSH 216
F + SY +I LCK G+ ++ L + R KP+ YN I SLC+ + V
Sbjct: 348 QFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI-GSLCEHNSKVQE 406
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
AF + + K Y ++I C G A LL EM DPD +TY+ L+
Sbjct: 407 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 466
Query: 277 ALGKEGKVREAKNMLAVMIK-QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
L EG A +L++M + + KP V +N+++ G C + + A +VF M ++
Sbjct: 467 GLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM 526
Query: 336 PDVHSYNIIINGLC---KIKMADEALNLL 361
P+ +Y I++ G+ ++++A E L+ L
Sbjct: 527 PNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 135/256 (52%)
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
++ +FS L ++ G++P+ T L+ LC ++++A++ + +++ G + + +Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 169 LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
L+N LCK G A++L+ +++ G + V YN ++ LC ++ + ++ KG
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
++PN TYS L+ +A+ LLDE+ +K +P++ +Y +L+ KEG+ +A
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+ + +G K +VV+YN L+ C +A + M P V +YNI+IN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 349 CKIKMADEALNLLAEM 364
++AL +L EM
Sbjct: 327 AFHGRTEQALQVLKEM 342
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 189 IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQ 248
I G KPD+ + D + +S +F +V G PNV + L+Y C +
Sbjct: 62 ITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANR 121
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNS 308
LK+AI +++ M I PD YT LV+ L K G V A ++ M G + VTYN+
Sbjct: 122 LKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNA 181
Query: 309 LMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
L+ G C++ +N++ + Q+G P+ +Y+ ++ K + DEA+ LL E+
Sbjct: 182 LVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 1/205 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N V+ L K + +M + KP+ T N + + H ++ AF ++ +
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLS 415
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ + ++I LC G A Q ++ GF + +Y LI GLC G +
Sbjct: 416 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFT 475
Query: 181 AALELLRRIQ-GRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A+E+L ++ KP V +N +I LCK + A +++ MV K PN TY+ L
Sbjct: 476 GAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAIL 535
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNI 264
+ G +L+ A +LDE+ L+ +
Sbjct: 536 VEGIAHEDELELAKEVLDELRLRKV 560
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 145/280 (51%), Gaps = 5/280 (1%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
GI P+ T NIL N +C+ L + + G++PD +T+ TL+ C G+++ A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
+ + + + + V+Y +LI GLCK G A + R+ RGIKPD + YNT+I +
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
CK+ ++ + L EM+ + P+ T ++ GF G+L A+ + E+ +D
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIP 410
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQ---GVKPDVVTYNSLMDGYCLVNEVNKAQD 324
L+ +L +EGK AK++L +I++ KP+ TYN+L++ + + +A
Sbjct: 411 FEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDAIEEALV 468
Query: 325 VFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + + + D +Y +I LC+I EA +L+AEM
Sbjct: 469 LKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 154/346 (44%), Gaps = 36/346 (10%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D ++ M ++ P + FN + ++ +ME G +P LVT N L+
Sbjct: 219 DCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLV 278
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ YC G++ AF + + +R PD +T+T+LIKGLC G+++ A Q ++ +G
Sbjct: 279 SSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +SY TLI CK G + +LL + G + PD I++ ++ + A +
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNF 398
Query: 221 YSEM--------------------------VAKGISPNVV----------TYSALIYGFC 244
E+ AK + ++ TY+ LI
Sbjct: 399 VVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLS 458
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
+++A+ L ++ +N D TY L+ L + G+ REA++++A M VKPD
Sbjct: 459 RCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSF 518
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
+L+ GYC + +KA+ + + + D SYN ++ +C+
Sbjct: 519 ICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCE 564
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 121/238 (50%)
Query: 127 DTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELL 186
D + F L+KG G ++ + +VL GF ++ V+ L+NGL KL ++
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIV 246
+ GI P+ +N + + C D D +M +G P++VTY+ L+ +C
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
G+LK+A L M + + PD+ TYT L+ L K+G+VREA M+ +G+KPD ++Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
N+L+ YC + +++ + + M PD + +I+ G + A+N + E+
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL 402
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%)
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V + L+ G KLG + R + G VV N +++ L K L+ + +
Sbjct: 164 WDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQV 223
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
YS M GI PN T++ L FC ++ L++M + +PD+ TY LV + +
Sbjct: 224 YSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCR 283
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G+++EA + +M ++ V PD+VTY SL+ G C V +A F+ M RG PD S
Sbjct: 284 RGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMS 343
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YN +I CK M ++ LL EM
Sbjct: 344 YNTLIYAYCKEGMMQQSKKLLHEM 367
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%)
Query: 94 VTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDD 153
V ++L+ Y LG + F V +L G+ +T L+ GL ++ Q +
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 154 VLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
+ G N ++ L N C + L +++ G +PD+V YNT++ S C+
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTI 273
+ AF LY M + + P++VTY++LI G C G++++A M + I PD +Y
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 274 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY 313
L+ A KEG ++++K +L M+ V PD T +++G+
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 6/301 (1%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + M + P + + ++ L K A H+M GIKP ++ N LI
Sbjct: 289 EAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLI 348
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
YC G + + +L +L PD T +++G G++ A+ F ++
Sbjct: 349 YAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVD 408
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRI---QGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ LI LC+ G+ AA LL RI +G KP+ YN +I+SL + + A
Sbjct: 409 IPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPET--YNNLIESLSRCDAIEEA 466
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L ++ + + TY ALI C +G+ ++A L+ EM + PD + LV
Sbjct: 467 LVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYG 526
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN-EVNKAQDVFNAMSQRGETP 336
KE +A+ +L++ + D +YNSL+ C KA ++ M + G P
Sbjct: 527 YCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVP 586
Query: 337 D 337
+
Sbjct: 587 N 587
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N ++ SL + A+ L +++ T LI C C +G+ A S++A +
Sbjct: 450 YNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMF 509
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG-ET 179
+PD+ L+ G C +A + + + + SY +L+ +C+ G
Sbjct: 510 DSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGY 569
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
ALEL R+Q G P+ + +I L + L +H
Sbjct: 570 KKALELQERMQRLGFVPNRLTCKYLIQVLEQPSLPNH 606
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 158/311 (50%), Gaps = 3/311 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P ++ +++S K +AI L +M+ ++P+ L+ Y +G++ A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ + G P T+T LIKGL G++ A F+ D+L G + V L+N L K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL-VSHAFDLYSEMVAKGISPNVV 234
+G + + P VV YNT+I +L + K VS + +M A +SP+
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
TYS LI G+C ++++A+ LL+EM K P Y L++ALGK K EA N L
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK-AKRYEAANELFKE 469
Query: 295 IKQGV-KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
+K+ Y ++ + ++++A D+FN M +G PDV++YN +++G+ K M
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 354 ADEALNLLAEM 364
+EA +LL +M
Sbjct: 530 INEANSLLRKM 540
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 152/324 (46%), Gaps = 1/324 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ F M + +P ++ + +++ L K A M G+ P +V +N L+N
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLC-LHGKIQRALQFHDDVLAQGFL 160
+G++ +V + + P +++ T+IK L + + D + A
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
++ +Y LI+G CK AL LL + +G P Y ++I++L K K A +L
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ E+ + + Y+ +I F G+L +A+ L +EM + PDVY Y L+ + K
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G + EA ++L M + G + D+ ++N +++G+ +A ++F + G PD +
Sbjct: 527 AGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YN ++ M +EA ++ EM
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREM 610
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 130/268 (48%), Gaps = 1/268 (0%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTK-HYSTAISLSHQMEFTGIKPSLVTMNILINCYC 104
F+ M TP + +N V+ +L ++K H S S +M+ + PS T +ILI+ YC
Sbjct: 361 FSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYC 420
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
++ A +L + ++G+ P + +LI L + + A + ++ ++
Sbjct: 421 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSR 480
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
Y +I K G+ S A++L ++ +G PDV YN ++ + K +++ A L +M
Sbjct: 481 VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
G ++ +++ ++ GF G ++AI + + + I PD TY L+ G
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDG 312
EA M+ M +G + D +TY+S++D
Sbjct: 601 EEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 134/321 (41%), Gaps = 1/321 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI F+ M P + +L K A+ L +M+ G P++ T LI
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
G+++ A+ +L+ G PD + L+ L G+++ ++
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP 371
Query: 162 NQVSYGTLINGLCK-LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
VSY T+I L + S +++ + P Y+ +ID CK V A L
Sbjct: 372 TVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLL 431
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
EM KG P Y +LI + + A L E+ + Y +++ GK
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
GK+ EA ++ M QG PDV YN+LM G +N+A + M + G D++S
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINS 551
Query: 341 YNIIINGLCKIKMADEALNLL 361
+NII+NG + + A+ +
Sbjct: 552 HNIILNGFARTGVPRRAIEMF 572
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 143/312 (45%), Gaps = 7/312 (2%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + ML+ TP + N ++ L K ++ +M P++V+ N +I
Sbjct: 321 EAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVI 380
Query: 101 NCY----CHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
H+ +++S F + P T++ LI G C ++++AL +++
Sbjct: 381 KALFESKAHVSEVSSWFDKMKA---DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE 437
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+GF +Y +LIN L K AA EL + ++ +Y +I K +S
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE 497
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A DL++EM +G P+V Y+AL+ G G + +A LL +M D+ ++ I+++
Sbjct: 498 AVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
+ G R A M + G+KPD VTYN+L+ + +A + M +G
Sbjct: 558 GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEY 617
Query: 337 DVHSYNIIINGL 348
D +Y+ I++ +
Sbjct: 618 DAITYSSILDAV 629
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 126/249 (50%), Gaps = 8/249 (3%)
Query: 121 KRGYQPDTITFTTLIKGL---CLHGKIQRALQFHDDVLAQGFL-LNQVSYGTLINGLCKL 176
+R +Q D T+ TLI+ L L+G++ R +Q +V+ ++ ++ L+ L +
Sbjct: 119 RRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQ---EVVRNTYVSVSPAVLSELVKALGRA 175
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG-ISPNVVT 235
S AL + + +GR KP YN++I L ++ ++Y+EM +G P+ +T
Sbjct: 176 KMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT 235
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
YSALI + +G+ AI L DEM + P YT L+ K GKV +A ++ M
Sbjct: 236 YSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMK 295
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
+ G P V TY L+ G V++A + M + G TPDV N ++N L K+ +
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVE 355
Query: 356 EALNLLAEM 364
E N+ +EM
Sbjct: 356 ELTNVFSEM 364
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 109/171 (63%)
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
IK DVV+ I+D LCKD +A +L++EM KGI PNV+TY+ +I FC G+ A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 254 GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY 313
LL M K I+PD+ T++ L++A KE KV EA+ + M++ + P +TYNS++DG+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 314 CLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
C + V+ A+ + ++M+ +G +PDV +++ +ING CK K D + + EM
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 176
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 130/240 (54%)
Query: 125 QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALE 184
+ D + T ++ LC G A ++ +G N ++Y +I+ C G S A +
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 185 LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
LLR + + I PD+V ++ +I++ K++ VS A ++Y EM+ I P +TY+++I GFC
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
++ A +LD M K PDV T++ L++ K +V + M ++G+ + V
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
TY +L+ G+C V +++ AQD+ N M G PD +++ ++ GLC K +A +L ++
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 124/224 (55%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
++ L K ++ A +L +M GI P+++T N +I+ +CH G+ + A +L ++++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
PD +TF+ LI K+ A + + ++L ++Y ++I+G CK A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
+L + +G PDVV ++T+I+ CK K V + +++ EM +GI N VTY+ LI+GF
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
C VG L A LL+EM + PD T+ ++ L + ++R+A
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 110/214 (51%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M + P + +N ++ S + +S A L M I P +VT + LIN +
Sbjct: 33 FTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVK 92
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
+++ A + +L+ P TIT+ ++I G C ++ A + D + ++G + V+
Sbjct: 93 ERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT 152
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+ TLING CK +E+ + RGI + V Y T+I C+ + A DL +EM+
Sbjct: 153 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+ G++P+ +T+ ++ G C +L++A +L+++
Sbjct: 213 SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 98/185 (52%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
DA M++ P I F+ ++ + VK + S A + +M I P+ +T N +
Sbjct: 62 SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ +C +++ A +L + +G PD +TF+TLI G C ++ ++ ++ +G
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ N V+Y TLI+G C++G+ AA +LL + G+ PD + ++ ++ LC K + AF
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFA 241
Query: 220 LYSEM 224
+ ++
Sbjct: 242 ILEDL 246
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ ML+ P +N ++ K A + M G P +VT + LIN YC
Sbjct: 103 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 162
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
++++ + + +RG +T+T+TTLI G C G + A +++++ G + ++
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 222
Query: 166 YGTLINGLCKLGETSAALELLRRIQ 190
+ ++ GLC E A +L +Q
Sbjct: 223 FHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 259 MGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE 318
MG +I DV T +VD L K+G A+N+ M ++G+ P+V+TYN ++D +C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 319 VNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ A + M ++ PD+ +++ +IN K + EA + EM
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM 106
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 158/307 (51%), Gaps = 3/307 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQI--NSAFSVLAG 118
+N ++ ++ +S A L M G P L++ N LIN G + N A +L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
+ G +PD IT+ TL+ + A++ +D+ A + +Y +I+ + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
+ A L ++ +G PD V YN+++ + +++ ++Y +M G + +TY+
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 239 LIYGFCIVGQLKQAIGLLDEM-GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
+I+ + GQL A+ L +M GL +PD TYT+L+D+LGK + EA +++ M+
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
G+KP + TY++L+ GY + +A+D F+ M + G PD +Y+++++ L + +A
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 358 LNLLAEM 364
L +M
Sbjct: 528 WGLYRDM 534
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 151/323 (46%), Gaps = 11/323 (3%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYST--AISLSHQMEFTGIKPSLVTMNILINCYCHL 106
M Q P + FN ++ + +K+ + A+ L + +G++P +T N L++
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRD 310
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIK--GLCLHGKIQRALQFHDDVLAQGFLLNQV 164
++ A V + QPD T+ +I G C G A + ++ +GF + V
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC--GLAAEAERLFMELELKGFFPDAV 368
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y +L+ + T E+ +++Q G D + YNTII K + A LY +M
Sbjct: 369 TYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Query: 225 VAKGIS---PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
KG+S P+ +TY+ LI + +A L+ EM I P + TY+ L+ K
Sbjct: 429 --KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKA 486
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GK EA++ + M++ G KPD + Y+ ++D NE KA ++ M G TP Y
Sbjct: 487 GKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLY 546
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
++I GL K +D+ + +M
Sbjct: 547 ELMILGLMKENRSDDIQKTIRDM 569
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 1/295 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P +N +L++ + + A+ + ME +P L T N +I+ Y G A +
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ +G+ PD +T+ +L+ ++ + + + GF ++++Y T+I+ K
Sbjct: 355 FMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 176 LGETSAALELLRRIQG-RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
G+ AL+L + ++G G PD + Y +IDSL K A L SEM+ GI P +
Sbjct: 415 QGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQ 474
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
TYSALI G+ G+ ++A M PD Y++++D L + + R+A + M
Sbjct: 475 TYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
I G P Y ++ G N + Q M + + ++++ G C
Sbjct: 535 ISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGEC 589
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 140/319 (43%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
FN M++ +P + N +L +L + +++ G K S ++ ++++ +
Sbjct: 810 FNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFAR 869
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G I + + + GY P + +I+ LC +++ A ++ F +
Sbjct: 870 AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAI 929
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+ +++ + + +++ +RI+ G++PD YNT+I C+D+ + L +M
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
G+ P + TY +LI F L+QA L +E+ K + D Y ++ G
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
+A+ +L +M G++P + T + LM Y +A+ V + + Y+ +I
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVI 1109
Query: 346 NGLCKIKMADEALNLLAEM 364
+ + K + + L EM
Sbjct: 1110 DAYLRSKDYNSGIERLLEM 1128
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 137/320 (42%), Gaps = 35/320 (10%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ ++ + K K + A S+ + +G P L T N L++ Y G A ++ ++
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G P + L+ LC+ G+++ +++ GF +++ S +++ + G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK------------- 227
++ ++ G P + +Y +I+ LCK K V A + SEM
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 228 ----------------------GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
G+ P+ TY+ LI +C + ++ L+ +M +D
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
P + TY L+ A GK+ + +A+ + ++ +G+K D Y+++M +KA+ +
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 326 FNAMSQRGETPDVHSYNIII 345
M G P + + ++++
Sbjct: 1055 LQMMKNAGIEPTLATMHLLM 1074
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 131/305 (42%), Gaps = 1/305 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ +L V +HY+ A + + +G + S ++ YC LG +A V+
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 121 KRGYQ-PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
+G+ + +T +I+ Q+A ++ G + ++ +L++ + G
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY 803
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A + + G P V N ++ +LC D + + + E+ G + + +
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
+ F G + + + M P + Y ++++ L K +VR+A+ M++ M +
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
K ++ +NS++ Y + + K V+ + + G PD +YN +I C+ + +E
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 360 LLAEM 364
L+ +M
Sbjct: 984 LMQQM 988
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 96/217 (44%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N +L + Y + + +++ TG++P T N LI YC + + ++ +
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G P T+ +LI +++A Q +++L++G L++ Y T++ G S
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A +LL+ ++ GI+P + + ++ S A + S + + + YS++I
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVI 1109
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+ I L EM + ++PD +T V A
Sbjct: 1110 DAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 133/307 (43%), Gaps = 9/307 (2%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF-SVLAGILKR 122
+L S + +S A L ++ + LI +C + +++A A
Sbjct: 615 ILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVH 674
Query: 123 GYQPDTIT-FTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
G+ + T + TL+ + A Q D+ G ++ +++ CKLG
Sbjct: 675 GWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPET 734
Query: 182 ALELLRRIQGRGI----KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
A +++ + + +G P MY II++ K KL A + + G +P++ T++
Sbjct: 735 AHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 791
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
+L+ + G ++A + + M P V + IL+ AL +G++ E ++ +
Sbjct: 792 SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 851
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
G K + ++D + + + + ++++M G P + Y ++I LCK K +A
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 358 LNLLAEM 364
+++EM
Sbjct: 912 EIMVSEM 918
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 167/355 (47%), Gaps = 49/355 (13%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
PP FN +L+ L + S L +M+ I+P +VT+ ILIN C +++ A
Sbjct: 293 EAPP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL 349
Query: 114 SVLAGILKRGYQ--------PDTITFTTLIKGLCLHGKIQRALQFHDDV-LAQGFLLNQV 164
V + RG + D+I F TLI GLC G+++ A + + L + + N V
Sbjct: 350 EVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y LI+G C+ G+ A E++ R++ IKP+VV NTI+ +C+ ++ A + +M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV--------- 275
+G+ NVVTY LI+ C V +++A+ ++M PD Y L+
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 276 -DALGKEGKVREA------------------KN-------MLAVMIKQGVKPDVVTYNSL 309
DA+ K++E KN ML M K+G KPD +TYN+L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + + + + M + G P V +Y +I+ C + DEAL L +M
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 150/306 (49%), Gaps = 2/306 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTG-IKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
FN ++ L K A L +M+ P+ VT N LI+ YC G++ +A V++ +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
+ +P+ +T T++ G+C H + A+ F D+ +G N V+Y TLI+ C +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A+ ++ G PD +Y +I LC+ + A + ++ G S +++ Y+ L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I FC ++ +L +M + PD TY L+ GK + M+ M + G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE-TPDVHSYNIIINGLCKIKMADEAL 358
P V TY +++D YC V E+++A +F M + P+ YNI+IN K+ +AL
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 359 NLLAEM 364
+L EM
Sbjct: 673 SLKEEM 678
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 4/286 (1%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
+RM + P + N ++ + + + A+ ME G+K ++VT LI+ C +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
+ A +L+ G PD + LI GLC + A++ + + GF L+ ++Y
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAY 549
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
LI C E+L ++ G KPD + YNT+I K K + +M
Sbjct: 550 NMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN-IDPDVYTYTILVDALGKEGKVR 285
G+ P V TY A+I +C VG+L +A+ L +MGL + ++P+ Y IL++A K G
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
+A ++ M + V+P+V TYN+L CL NE + + + M +
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALFK--CL-NEKTQGETLLKLMDE 712
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 150/316 (47%), Gaps = 1/316 (0%)
Query: 50 LQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQI 109
L+ P +N ++ + TA + +M+ IKP++VT+N ++ C +
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 110 NSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTL 169
N A + K G + + +T+ TLI C +++A+ +++ +L G + Y L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 170 INGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGI 229
I+GLC++ A+ ++ +++ G D++ YN +I C +++ ++M +G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 230 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKN 289
P+ +TY+ LI F + ++++M +DP V TY ++DA G++ EA
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 290 MLAVM-IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+ M + V P+ V YN L++ + + +A + M + P+V +YN + L
Sbjct: 638 LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 349 CKIKMADEALNLLAEM 364
+ + L L+ EM
Sbjct: 698 NEKTQGETLLKLMDEM 713
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 126/249 (50%), Gaps = 7/249 (2%)
Query: 123 GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAA 182
G P+++ T I LC + + A D++ L + L++ L + + S
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 183 LELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG------ISPNVVTY 236
+L+ ++ I+PDVV +I++LCK + V A +++ +M K I + + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGL-KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
+ LI G C VG+LK+A LL M L + P+ TY L+D + GK+ AK +++ M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
+ +KP+VVT N+++ G C + +N A F M + G +V +Y +I+ C + +
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 356 EALNLLAEM 364
+A+ +M
Sbjct: 494 KAMYWYEKM 502
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 22/293 (7%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A+ + +ML+ +P + +++ L + + AI + +++ G L+ N
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+LI +C + +L + K G +PD+IT+ TLI H + + + +
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQ-GRGIKPDVVMYNTIIDSLCKDKLVSH 216
G +YG +I+ C +GE AL+L + + + P+ V+YN +I++ K
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A L EM K + PNV TY+AL Q + + L+DEM ++ +P+ T IL++
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ--DVFN 327
L ++V M GY + + KA DVF+
Sbjct: 731 RLSGSD-------------------ELVKLRKFMQGYSVASPTEKASPFDVFS 764
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 146 RALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
+ L+ ++ + L V+ LI ++G + ++ + R+ V N ++
Sbjct: 135 KLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RNVVV 192
Query: 206 DSLCKDKLVSHAFDLYSEMVAKG--ISPNVVTYSALIYGFCIVGQLKQA--IGLLDEMGL 261
D L ++ LV AF + EM+ K PN +T +++ L + I L+
Sbjct: 193 DVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSS 252
Query: 262 KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
+ P+ T + +L K + A ++L+ ++K + +N+L+ ++++
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 322 AQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
D+ M + PDV + I+IN LCK + DEAL + +M
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM 355
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 167/355 (47%), Gaps = 49/355 (13%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
PP FN +L+ L + S L +M+ I+P +VT+ ILIN C +++ A
Sbjct: 293 EAPP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL 349
Query: 114 SVLAGILKRGYQ--------PDTITFTTLIKGLCLHGKIQRALQFHDDV-LAQGFLLNQV 164
V + RG + D+I F TLI GLC G+++ A + + L + + N V
Sbjct: 350 EVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y LI+G C+ G+ A E++ R++ IKP+VV NTI+ +C+ ++ A + +M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV--------- 275
+G+ NVVTY LI+ C V +++A+ ++M PD Y L+
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 276 -DALGKEGKVREA------------------KN-------MLAVMIKQGVKPDVVTYNSL 309
DA+ K++E KN ML M K+G KPD +TYN+L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + + + + M + G P V +Y +I+ C + DEAL L +M
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 150/306 (49%), Gaps = 2/306 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTG-IKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
FN ++ L K A L +M+ P+ VT N LI+ YC G++ +A V++ +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
+ +P+ +T T++ G+C H + A+ F D+ +G N V+Y TLI+ C +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A+ ++ G PD +Y +I LC+ + A + ++ G S +++ Y+ L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I FC ++ +L +M + PD TY L+ GK + M+ M + G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE-TPDVHSYNIIINGLCKIKMADEAL 358
P V TY +++D YC V E+++A +F M + P+ YNI+IN K+ +AL
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 359 NLLAEM 364
+L EM
Sbjct: 673 SLKEEM 678
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 4/286 (1%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
+RM + P + N ++ + + + A+ ME G+K ++VT LI+ C +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
+ A +L+ G PD + LI GLC + A++ + + GF L+ ++Y
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAY 549
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
LI C E+L ++ G KPD + YNT+I K K + +M
Sbjct: 550 NMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN-IDPDVYTYTILVDALGKEGKVR 285
G+ P V TY A+I +C VG+L +A+ L +MGL + ++P+ Y IL++A K G
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
+A ++ M + V+P+V TYN+L CL NE + + + M +
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALFK--CL-NEKTQGETLLKLMDE 712
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 150/316 (47%), Gaps = 1/316 (0%)
Query: 50 LQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQI 109
L+ P +N ++ + TA + +M+ IKP++VT+N ++ C +
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 110 NSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTL 169
N A + K G + + +T+ TLI C +++A+ +++ +L G + Y L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 170 INGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGI 229
I+GLC++ A+ ++ +++ G D++ YN +I C +++ ++M +G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 230 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKN 289
P+ +TY+ LI F + ++++M +DP V TY ++DA G++ EA
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 290 MLAVM-IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+ M + V P+ V YN L++ + + +A + M + P+V +YN + L
Sbjct: 638 LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 349 CKIKMADEALNLLAEM 364
+ + L L+ EM
Sbjct: 698 NEKTQGETLLKLMDEM 713
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 126/249 (50%), Gaps = 7/249 (2%)
Query: 123 GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAA 182
G P+++ T I LC + + A D++ L + L++ L + + S
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 183 LELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG------ISPNVVTY 236
+L+ ++ I+PDVV +I++LCK + V A +++ +M K I + + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGL-KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
+ LI G C VG+LK+A LL M L + P+ TY L+D + GK+ AK +++ M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
+ +KP+VVT N+++ G C + +N A F M + G +V +Y +I+ C + +
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 356 EALNLLAEM 364
+A+ +M
Sbjct: 494 KAMYWYEKM 502
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A+ + +ML+ +P + +++ L + + AI + +++ G L+ N
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+LI +C + +L + K G +PD+IT+ TLI H + + + +
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQ-GRGIKPDVVMYNTIIDSLCKDKLVSH 216
G +YG +I+ C +GE AL+L + + + P+ V+YN +I++ K
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
A L EM K + PNV TY+AL Q + + L+DEM
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 146 RALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
+ L+ ++ + L V+ LI ++G + ++ + R+ V N ++
Sbjct: 135 KLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RNVVV 192
Query: 206 DSLCKDKLVSHAFDLYSEMVAKG--ISPNVVTYSALIYGFCIVGQLKQA--IGLLDEMGL 261
D L ++ LV AF + EM+ K PN +T +++ L + I L+
Sbjct: 193 DVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSS 252
Query: 262 KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
+ P+ T + +L K + A ++L+ ++K + +N+L+ ++++
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 322 AQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
D+ M + PDV + I+IN LCK + DEAL + +M
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM 355
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 166/355 (46%), Gaps = 49/355 (13%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
PP FN +L+ L + S L +M+ I+P +VT+ ILIN C +++ A
Sbjct: 293 EAPP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL 349
Query: 114 SVLAGILKRGYQ--------PDTITFTTLIKGLCLHGKIQRALQFHDDV-LAQGFLLNQV 164
V + RG + D+I F TLI GLC G+++ A + + L + N V
Sbjct: 350 EVFEKM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAV 407
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y LI+G C+ G+ A E++ R++ IKP+VV NTI+ +C+ ++ A + +M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV--------- 275
+G+ NVVTY LI+ C V +++A+ ++M PD Y L+
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 276 -DALGKEGKVREA------------------KN-------MLAVMIKQGVKPDVVTYNSL 309
DA+ K++E KN ML M K+G KPD +TYN+L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + + + + M + G P V +Y +I+ C + DEAL L +M
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 150/306 (49%), Gaps = 2/306 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTG-IKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
FN ++ L K A L +M+ P+ VT N LI+ YC G++ +A V++ +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
+ +P+ +T T++ G+C H + A+ F D+ +G N V+Y TLI+ C +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A+ ++ G PD +Y +I LC+ + A + ++ G S +++ Y+ L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I FC ++ +L +M + PD TY L+ GK + M+ M + G+
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE-TPDVHSYNIIINGLCKIKMADEAL 358
P V TY +++D YC V E+++A +F M + P+ YNI+IN K+ +AL
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 359 NLLAEM 364
+L EM
Sbjct: 673 SLKEEM 678
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 140/286 (48%), Gaps = 4/286 (1%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
+RM + P + N ++ + + + A+ ME G+K ++VT LI+ C +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
+ A +L+ G PD + LI GLC + A++ + + GF L+ ++Y
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAY 549
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
LI C T E+L ++ G KPD + YNT+I K K + +M
Sbjct: 550 NMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN-IDPDVYTYTILVDALGKEGKVR 285
G+ P V TY A+I +C VG+L +A+ L +MGL + ++P+ Y IL++A K G
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
+A ++ M + V+P+V TYN+L CL NE + + + M +
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALFK--CL-NEKTQGETLLKLMDE 712
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 150/316 (47%), Gaps = 1/316 (0%)
Query: 50 LQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQI 109
L+ P +N ++ + TA + +M+ IKP++VT+N ++ C +
Sbjct: 398 LEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 110 NSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTL 169
N A + K G + + +T+ TLI C +++A+ +++ +L G + Y L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 170 INGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGI 229
I+GLC++ A+ ++ +++ G D++ YN +I C +++ ++M +G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK 577
Query: 230 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKN 289
P+ +TY+ LI F + ++++M +DP V TY ++DA G++ EA
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 290 MLAVM-IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+ M + V P+ V YN L++ + + +A + M + P+V +YN + L
Sbjct: 638 LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 349 CKIKMADEALNLLAEM 364
+ + L L+ EM
Sbjct: 698 NEKTQGETLLKLMDEM 713
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 144/284 (50%), Gaps = 11/284 (3%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILK---RGYQPDTITFTTLIKGLCLHGKIQRA 147
P+ +T +I+++ G++ + ++A I + G P+++ T I LC + + A
Sbjct: 220 PNRITADIVLHEVWK-GRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAA 278
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
D++ L + L++ L + + S +L+ ++ I+PDVV +I++
Sbjct: 279 WDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINT 338
Query: 208 LCKDKLVSHAFDLYSEMVAKG------ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL 261
LCK + V A +++ +M K I + + ++ LI G C VG+LK+A LL M L
Sbjct: 339 LCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 262 -KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN 320
+ P+ TY L+D + GK+ AK +++ M + +KP+VVT N+++ G C + +N
Sbjct: 399 EERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
A F M + G +V +Y +I+ C + ++A+ +M
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 22/293 (7%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A+ + +ML+ +P + +++ L + + AI + +++ G L+ N
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+LI +C + +L + K G +PD+IT+ TLI H + + + +
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQ-GRGIKPDVVMYNTIIDSLCKDKLVSH 216
G +YG +I+ C +GE AL+L + + + P+ V+YN +I++ K
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A L EM K + PNV TY+AL Q + + L+DEM ++ +P+ T IL++
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ--DVFN 327
L ++V M GY + + KA DVF+
Sbjct: 731 RLSGSD-------------------ELVKLRKFMQGYSVASPTEKASPFDVFS 764
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 102/224 (45%), Gaps = 8/224 (3%)
Query: 146 RALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
+ L+ ++ + L V+ LI ++G + ++ + R+ V N ++
Sbjct: 135 KLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RNVVV 192
Query: 206 DSLCKDKLVSHAFDLYSEMVAKG--ISPNVVTYSALIYGFCIVGQL---KQAIGLLDEMG 260
D L ++ LV AF + EM+ K PN +T +++ G+L ++ I L+
Sbjct: 193 DVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVW-KGRLLTEEKIIALISRFS 251
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN 320
+ P+ T + +L K + A ++L+ ++K + +N+L+ +++
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ D+ M + PDV + I+IN LCK + DEAL + +M
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM 355
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 162/329 (49%), Gaps = 2/329 (0%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N +A+ +M P + N VL++ + YS A+S M+ ++P T N
Sbjct: 96 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 155
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQ--PDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
I+I C LGQ + A + + ++ + PD +TFT+++ + G+I+ + ++
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
A+G N VSY L+ G + AL +L I+ GI PDVV Y +++S + +
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A +++ M + PNVVTY+ALI + G L +A+ + +M I P+V + L+
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
A + K +L+ +G+ + YNS + Y E+ KA ++ +M ++
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
D ++ I+I+G C++ EA++ L EM
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M + P ++ ++ + + + A++L M I PS T N LIN
Sbjct: 34 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 93
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G A V + G PD +T ++ + +AL + + + + +
Sbjct: 94 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTT 153
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGI--KPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
+ +I L KLG++S AL+L ++ + +PDVV + +I+ + + ++
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 213
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGK 283
MVA+G+ PN+V+Y+AL+ + + G A+ +L ++ I PDV +YT L+++ G+ +
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Query: 284 VREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+AK + +M K+ KP+VVTYN+L+D Y + +A ++F M Q G P+V S
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 330
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 2/263 (0%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
N++I + ++ A + + K +PD T+ LI G+ + A+ DD+L
Sbjct: 15 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 74
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
++ +Y LIN G ALE+ +++ G+ PD+V +N ++ + + S
Sbjct: 75 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 134
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID--PDVYTYTIL 274
A + M + P+ T++ +IY +GQ QA+ L + M K + PDV T+T +
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 194
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+ +G++ + + M+ +G+KP++V+YN+LM Y + A V + Q G
Sbjct: 195 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 254
Query: 335 TPDVHSYNIIINGLCKIKMADEA 357
PDV SY ++N + + +A
Sbjct: 255 IPDVVSYTCLLNSYGRSRQPGKA 277
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 149/325 (45%), Gaps = 2/325 (0%)
Query: 42 AISHFNRMLQMPST--PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
A+ FN M + + P + F ++ ++ M G+KP++V+ N L
Sbjct: 170 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 229
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ Y G +A SVL I + G PD +++T L+ + +A + + +
Sbjct: 230 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 289
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N V+Y LI+ G + A+E+ R+++ GIKP+VV T++ + + K +
Sbjct: 290 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 349
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ S ++GI+ N Y++ I + +L++AI L M K + D T+TIL+
Sbjct: 350 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
+ K EA + L M + Y+S++ Y +V +A+ +FN M G PDV
Sbjct: 410 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 469
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
+Y +++ + +A L EM
Sbjct: 470 AYTSMLHAYNASEKWGKACELFLEM 494
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M+ P I +N ++ + TA+S+ ++ GI P +V+ L+N Y
Sbjct: 211 FEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR 270
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
Q A V + K +P+ +T+ LI +G + A++ + G N VS
Sbjct: 271 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 330
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
TL+ + + +L Q RGI + YN+ I S + A LY M
Sbjct: 331 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 390
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
K + + VT++ LI G C + + +AI L EM +I Y+ ++ A K+G+V
Sbjct: 391 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 450
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
EA+++ M G +PDV+ Y S++ Y + KA ++F M G PD
Sbjct: 451 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPD 502
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 147/378 (38%), Gaps = 70/378 (18%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTM-- 96
PG A F M + P + +N ++ + + A+ + QME GIKP++V++
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 333
Query: 97 ---------------------------------NILINCYCHLGQINSAFSVLAGILKRG 123
N I Y + ++ A ++ + K+
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 393
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
+ D++TFT LI G C K A+ + ++ L + Y +++ K G+ + A
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 453
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
+ +++ G +PDV+ Y +++ + + A +L+ EM A GI P+ + SAL+ F
Sbjct: 454 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Query: 244 CIVGQLKQAIGLLDEMGLKNI------------------------------DPDVYTYTI 273
GQ L+D M K I DP + + +I
Sbjct: 514 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 573
Query: 274 -----LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
++ GK GKV + +I GV ++ TY L++ V K +V
Sbjct: 574 GLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEW 633
Query: 329 MSQRGETPDVHSYNIIIN 346
MS G P Y II+
Sbjct: 634 MSGAGIQPSNQMYRDIIS 651
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 80/165 (48%)
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+YN +I + V A L+ EM P+ TY ALI GQ + A+ L+D+M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
I P TY L++A G G REA + M GV PD+VT+N ++ Y +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 320 NKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+KA F M PD ++NIII L K+ + +AL+L M
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 177
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 122/287 (42%), Gaps = 3/287 (1%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G A+S + Q P + + +L S +++ A + M KP++VT N L
Sbjct: 240 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 299
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ Y G + A + + + G +P+ ++ TL+ K ++G
Sbjct: 300 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
LN +Y + I E A+ L + ++ + +K D V + +I C+ A
Sbjct: 360 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 419
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
EM I YS+++ + GQ+ +A + ++M + +PDV YT ++ A
Sbjct: 420 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 479
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
K +A + M G++PD + ++LM + N+ + +VF
Sbjct: 480 ASEKWGKACELFLEMEANGIEPDSIACSALMRAF---NKGGQPSNVF 523
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 141/265 (53%), Gaps = 2/265 (0%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQ-PDTITFTTLIKGLCLHGKIQR 146
G++P+ NIL+ +C G IN AF V+ + + G P++IT++TL+ L H + +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 147 ALQFHDDVLA-QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
A++ +D+++ +G + V++ +ING C+ GE A ++L ++ G P+V Y+ ++
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 206 DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
+ CK + A + E+ G+ + V Y+ L+ FC G+ +A+ LL EM
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
D TY +++ L EG+ EA ML +GV + +Y +++ C E+ KA
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 326 FNAMSQRGETPDVHSYNIIINGLCK 350
+ MS+RG P ++N ++ LC+
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCE 455
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 1/262 (0%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQM-EFTGIKPSLVTMNILINCYCHLGQINSA 112
S P ++ ++ L A+ L M GI P VT N++IN +C G++ A
Sbjct: 228 SYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA 287
Query: 113 FSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLING 172
+L + K G P+ ++ L+ G C GKIQ A Q D+V G L+ V Y TL+N
Sbjct: 288 KKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 173 LCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPN 232
C+ GET A++LL ++ + D + YN I+ L + A + + ++G+ N
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLN 407
Query: 233 VVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLA 292
+Y ++ C G+L++A+ L M + I P T+ LV L + G +L
Sbjct: 408 KGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLI 467
Query: 293 VMIKQGVKPDVVTYNSLMDGYC 314
++ G+ P ++ ++++ C
Sbjct: 468 GFLRIGLIPGPKSWGAVVESIC 489
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 3/279 (1%)
Query: 89 IKPSLVTMNILINCYCHLGQIN-SAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
+KPSL ++ +N G++N S +L G QP+T F L+K C +G I A
Sbjct: 156 VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFA 215
Query: 148 LQFHDDVLAQGFLL-NQVSYGTLINGLCKLGETSAALELLRR-IQGRGIKPDVVMYNTII 205
+++ G N ++Y TL++ L + A+EL I GI PD V +N +I
Sbjct: 216 FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 206 DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
+ C+ V A + M G +PNV YSAL+ GFC VG++++A DE+ +
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLK 335
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
D YT L++ + G+ EA +L M + D +TYN ++ G +A +
Sbjct: 336 LDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQM 395
Query: 326 FNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ G + SY II+N LC ++A+ L+ M
Sbjct: 396 LDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVM 434
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 114/245 (46%), Gaps = 1/245 (0%)
Query: 41 DAISHFNRMLQMPS-TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
+A+ F M+ +P FN ++ + A + M+ G P++ + L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+N +C +G+I A + K G + DT+ +TTL+ C +G+ A++ ++ A
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ ++Y ++ GL G + AL++L + G+ + Y I+++LC + + A
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVK 429
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
S M +GI P+ T++ L+ C G + + +L + P ++ +V+++
Sbjct: 430 FLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Query: 280 KEGKV 284
KE K+
Sbjct: 490 KERKL 494
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 35/206 (16%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P ++ ++ ++ K A +++ TG+K V L+NC+C G+ + A +
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L + + DT+T+ +++GL G+ + ALQ D ++G LN+ SY ++N LC
Sbjct: 361 LGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCC 420
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYN--------------------------------- 202
GE A++ L + RGI P +N
Sbjct: 421 NGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKS 480
Query: 203 --TIIDSLCKDKLVSHAFDLYSEMVA 226
+++S+CK++ + H F+L +V+
Sbjct: 481 WGAVVESICKERKLVHVFELLDSLVS 506
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 162/329 (49%), Gaps = 2/329 (0%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N +A+ +M P + N VL++ + YS A+S M+ ++P T N
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 287
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQ--PDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
I+I C LGQ + A + + ++ + PD +TFT+++ + G+I+ + ++
Sbjct: 288 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
A+G N VSY L+ G + AL +L I+ GI PDVV Y +++S + +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A +++ M + PNVVTY+ALI + G L +A+ + +M I P+V + L+
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
A + K +L+ +G+ + YNS + Y E+ KA ++ +M ++
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
D ++ I+I+G C++ EA++ L EM
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M + P ++ ++ + + + A++L M I PS T N LIN
Sbjct: 166 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 225
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G A V + G PD +T ++ + +AL + + + + +
Sbjct: 226 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTT 285
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGI--KPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
+ +I L KLG++S AL+L ++ + +PDVV + +I+ + + ++
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGK 283
MVA+G+ PN+V+Y+AL+ + + G A+ +L ++ I PDV +YT L+++ G+ +
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Query: 284 VREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+AK + +M K+ KP+VVTYN+L+D Y + +A ++F M Q G P+V S
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 2/263 (0%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
N++I + ++ A + + K +PD T+ LI G+ + A+ DD+L
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
++ +Y LIN G ALE+ +++ G+ PD+V +N ++ + + S
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID--PDVYTYTIL 274
A + M + P+ T++ +IY +GQ QA+ L + M K + PDV T+T +
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+ +G++ + + M+ +G+KP++V+YN+LM Y + A V + Q G
Sbjct: 327 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 386
Query: 335 TPDVHSYNIIINGLCKIKMADEA 357
PDV SY ++N + + +A
Sbjct: 387 IPDVVSYTCLLNSYGRSRQPGKA 409
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 149/325 (45%), Gaps = 2/325 (0%)
Query: 42 AISHFNRMLQMPST--PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
A+ FN M + + P + F ++ ++ M G+KP++V+ N L
Sbjct: 302 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 361
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ Y G +A SVL I + G PD +++T L+ + +A + + +
Sbjct: 362 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 421
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N V+Y LI+ G + A+E+ R+++ GIKP+VV T++ + + K +
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 481
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ S ++GI+ N Y++ I + +L++AI L M K + D T+TIL+
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
+ K EA + L M + Y+S++ Y +V +A+ +FN M G PDV
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 601
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
+Y +++ + +A L EM
Sbjct: 602 AYTSMLHAYNASEKWGKACELFLEM 626
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M+ P I +N ++ + TA+S+ ++ GI P +V+ L+N Y
Sbjct: 343 FEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR 402
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
Q A V + K +P+ +T+ LI +G + A++ + G N VS
Sbjct: 403 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
TL+ + + +L Q RGI + YN+ I S + A LY M
Sbjct: 463 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 522
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
K + + VT++ LI G C + + +AI L EM +I Y+ ++ A K+G+V
Sbjct: 523 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 582
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
EA+++ M G +PDV+ Y S++ Y + KA ++F M G PD
Sbjct: 583 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPD 634
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 147/378 (38%), Gaps = 70/378 (18%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTM-- 96
PG A F M + P + +N ++ + + A+ + QME GIKP++V++
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 465
Query: 97 ---------------------------------NILINCYCHLGQINSAFSVLAGILKRG 123
N I Y + ++ A ++ + K+
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 525
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
+ D++TFT LI G C K A+ + ++ L + Y +++ K G+ + A
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 585
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
+ +++ G +PDV+ Y +++ + + A +L+ EM A GI P+ + SAL+ F
Sbjct: 586 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 645
Query: 244 CIVGQLKQAIGLLDEMGLKNI------------------------------DPDVYTYTI 273
GQ L+D M K I DP + + +I
Sbjct: 646 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 705
Query: 274 -----LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
++ GK GKV + +I GV ++ TY L++ V K +V
Sbjct: 706 GLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEW 765
Query: 329 MSQRGETPDVHSYNIIIN 346
MS G P Y II+
Sbjct: 766 MSGAGIQPSNQMYRDIIS 783
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 80/165 (48%)
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+YN +I + V A L+ EM P+ TY ALI GQ + A+ L+D+M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
I P TY L++A G G REA + M GV PD+VT+N ++ Y +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 320 NKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+KA F M PD ++NIII L K+ + +AL+L M
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 122/287 (42%), Gaps = 3/287 (1%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G A+S + Q P + + +L S +++ A + M KP++VT N L
Sbjct: 372 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 431
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ Y G + A + + + G +P+ ++ TL+ K ++G
Sbjct: 432 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
LN +Y + I E A+ L + ++ + +K D V + +I C+ A
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
EM I YS+++ + GQ+ +A + ++M + +PDV YT ++ A
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 611
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
K +A + M G++PD + ++LM + N+ + +VF
Sbjct: 612 ASEKWGKACELFLEMEANGIEPDSIACSALMRAF---NKGGQPSNVF 655
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 158/340 (46%), Gaps = 21/340 (6%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFT-GIKPSLVTMNIL 99
+++ F M QM +P + FN +L+ L+K A L +M T G+ P T N L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
IN +C ++ AF + + PD +T+ T+I GLC GK++ A +L +
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT 275
Query: 160 LL--NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ N VSY TL+ G C E A+ + + RG+KP+ V YNT+I L + +H
Sbjct: 276 DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE----AHR 331
Query: 218 FDLYSEMVAKG------ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTY 271
+D +++ G +P+ T++ LI C G L A+ + EM + PD +Y
Sbjct: 332 YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGV-------KPDVVTYNSLMDGYCLVNEVNKAQD 324
++L+ L + A+ + + ++ V KP YN + + C + +A+
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEK 451
Query: 325 VFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
VF + +RG D SY +I G C+ A LL M
Sbjct: 452 VFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLM 490
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 157/356 (44%), Gaps = 47/356 (13%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP + FN ++ K A + ME P +VT N +I+ C G++ A +
Sbjct: 206 TPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHN 265
Query: 115 VLAGILKRG--YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLING 172
VL+G+LK+ P+ +++TTL++G C+ +I A+ D+L++G N V+Y TLI G
Sbjct: 266 VLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG 325
Query: 173 L-------------------------------------CKLGETSAALELLRRIQGRGIK 195
L C G AA+++ + + +
Sbjct: 326 LSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH 385
Query: 196 PDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGI-------SPNVVTYSALIYGFCIVGQ 248
PD Y+ +I +LC A L++E+ K + P Y+ + C G+
Sbjct: 386 PDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGK 445
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNS 308
KQA + ++ + + D +Y L+ +EGK + A +L +M+++ PD+ TY
Sbjct: 446 TKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYEL 504
Query: 309 LMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
L+DG + E A D M + P +++ ++ L K K A+E+ L+ M
Sbjct: 505 LIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLM 560
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
FN ++ S + ++ L M+ GI PS++T N L++ G+ A + +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 121 KR-GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
+ G PD+ TF TLI G C + + A + D+ + V+Y T+I+GLC+ G+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 180 SAALELLRRI--QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
A +L + + + P+VV Y T++ C + + A ++ +M+++G+ PN VTY+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 238 ALIYGFCIVGQLKQAIGLL--DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
LI G + + +L PD T+ IL+ A G + A + M+
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR----GE---TPDVHSYNIIINGL 348
+ PD +Y+ L+ C+ NE ++A+ +FN + ++ G+ P +YN + L
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 349 C---KIKMADEALNLL 361
C K K A++ L
Sbjct: 441 CANGKTKQAEKVFRQL 456
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 138/275 (50%), Gaps = 41/275 (14%)
Query: 128 TITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLI----------------- 170
TI+ TT+++ L L L+F D V +GF + S+ ++
Sbjct: 65 TISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLF 124
Query: 171 ------NGLCKL---------------GETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
NG KL G +++L + ++ GI P V+ +N+++ L
Sbjct: 125 SIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILL 184
Query: 210 KDKLVSHAFDLYSEMVAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
K A DL+ EM G++P+ T++ LI GFC + +A + +M L + +PDV
Sbjct: 185 KRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDV 244
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQG--VKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
TY ++D L + GKV+ A N+L+ M+K+ V P+VV+Y +L+ GYC+ E+++A VF
Sbjct: 245 VTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVF 304
Query: 327 NAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
+ M RG P+ +YN +I GL + DE ++L
Sbjct: 305 HDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 125/239 (52%), Gaps = 5/239 (2%)
Query: 131 FTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQ 190
F +LI+ G Q +++ + G + +++ +L++ L K G T A +L ++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 191 GR-GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
G+ PD +NT+I+ CK+ +V AF ++ +M +P+VVTY+ +I G C G++
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 250 KQAIGLLDEMGLKNID--PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYN 307
K A +L M K D P+V +YT LV + ++ EA + M+ +G+KP+ VTYN
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 308 SLMDGYCLVNEVNKAQDVFNAMSQRGET--PDVHSYNIIINGLCKIKMADEALNLLAEM 364
+L+ G + ++ +D+ + T PD ++NI+I C D A+ + EM
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEM 379
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 143/317 (45%), Gaps = 17/317 (5%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGI-------KPSLV 94
A+ F ML M P ++ ++ +L + A +L +++ + KP
Sbjct: 372 AMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAA 431
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDV 154
N + C G+ A V ++KRG Q D ++ TLI G C GK + A + +
Sbjct: 432 AYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLM 490
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
L + F+ + +Y LI+GL K+GE A + L+R+ P +++++ L K K
Sbjct: 491 LRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFA 550
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQA---IGLLDEMGLKNIDPDVYTY 271
+ +F L + M+ K I N+ + ++ Q ++A + LL + G +
Sbjct: 551 NESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGY------LVKM 604
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
L+ L + K+ +A ++ +++ D+ T N++++G C ++A ++N + +
Sbjct: 605 EELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVE 664
Query: 332 RGETPDVHSYNIIINGL 348
G + + ++ N L
Sbjct: 665 LGNHQQLSCHVVLRNAL 681
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A+ + +M G++P L++ C G + A V ++ + P+ FT+L+
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED-MREKFPPNLRYFTSLLY 244
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
G C GK+ A + + G + V + L++G G+ + A +L+ ++ RG +P
Sbjct: 245 GWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEP 304
Query: 197 DVVMYNTIIDSLCK-DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGL 255
+V Y +I +LC+ +K + A ++ EM G ++VTY+ALI GFC G + + +
Sbjct: 305 NVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSV 364
Query: 256 LDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCL 315
LD+M K + P TY ++ A K+ + E ++ M ++G PD++ YN ++ C
Sbjct: 365 LDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACK 424
Query: 316 VNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ EV +A ++N M G +P V ++ I+ING EA N EM
Sbjct: 425 LGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 11/323 (3%)
Query: 50 LQMPSTPPIFEFNKVLTSLV----KTKHYSTAISLSHQMEFTG---IKPSLVTMNILINC 102
L P F +V S+V K + + L +M T I+P L +L+
Sbjct: 119 LWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRR 176
Query: 103 YCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLN 162
+ + A VL + K G +PD F L+ LC +G ++ A + +D + + F N
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED-MREKFPPN 235
Query: 163 QVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYS 222
+ +L+ G C+ G+ A E+L +++ G++PD+V++ ++ ++ A+DL +
Sbjct: 236 LRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMN 295
Query: 223 EMVAKGISPNVVTYSALIYGFCIV-GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
+M +G PNV Y+ LI C ++ +A+ + EM + D+ TYT L+ K
Sbjct: 296 DMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKW 355
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
G + + ++L M K+GV P VTY +M + + + ++ M +RG PD+ Y
Sbjct: 356 GMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIY 415
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
N++I CK+ EA+ L EM
Sbjct: 416 NVVIRLACKLGEVKEAVRLWNEM 438
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 130/297 (43%), Gaps = 40/297 (13%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL-GQINSAFS 114
P I F +L+ + A L + M G +P++ +LI C +++ A
Sbjct: 269 PDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMR 328
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
V + + G + D +T+T LI G C G I + DD+ +G + +QV+Y ++
Sbjct: 329 VFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHE 388
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
K + LEL+ +++ RG PD+++YN +I CK V A L++EM A G+SP V
Sbjct: 389 KKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVD 448
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNI------------------------DPDVYT 270
T+ +I GF G L +A EM + I DV++
Sbjct: 449 TFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWS 508
Query: 271 ---------------YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
+TI + AL +G V+EA + M++ + P TY LM G
Sbjct: 509 CISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKG 565
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 117/281 (41%), Gaps = 40/281 (14%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKT-KHYSTAISLSHQMEFTGIKPSLVTMNI 98
DA N M + P + + ++ +L +T K A+ + +ME G + +VT
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 99 LINCYCHLGQINSAFSVL-----AGIL------------------------------KRG 123
LI+ +C G I+ +SVL G++ +RG
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
PD + + +I+ C G+++ A++ +++ A G ++ +ING G A
Sbjct: 408 CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEAC 467
Query: 184 ELLRRIQGRGI--KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP--NVVTYSAL 239
+ + RGI P +++++L +D + A D++S + K S NV ++
Sbjct: 468 NHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIW 527
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
I+ G +K+A +M ++ P TY L+ L K
Sbjct: 528 IHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 146/301 (48%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
++++L + A +L ++ +GIKP N L+ Y G + A S+++ + KRG
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
PD T++ LI G+ + A ++ A N + L+ G GE
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
++L+ ++ G+KPD YN +ID+ K + HA + M+++GI P+ VT++ LI
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
C G+ A + + M + P TY I++++ G + + + K +L M QG+ P+V
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
VT+ +L+D Y N A + M G P YN +IN + ++++A+N
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 364 M 364
M
Sbjct: 610 M 610
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 151/324 (46%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + F + Q P +N +L VKT A S+ +ME G+ P T ++LI
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ Y + G+ SA VL + QP++ F+ L+ G G+ Q+ Q ++ + G
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
++ Y +I+ K A+ R+ GI+PD V +NT+ID CK A ++
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ M +G P TY+ +I + + LL +M + I P+V T+T LVD GK
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G+ +A L M G+KP YN+L++ Y +A + F M+ G P + +
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
N +IN + + EA +L M
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYM 645
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 141/297 (47%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P F F+++L + + +M+ G+KP N++I+ + ++ A +
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+L G +PD +T+ TLI C HG+ A + + + +G L +Y +IN
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 526
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
LL +++ +GI P+VV + T++D K + A + EM + G+ P+
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 586
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+ALI + G +QA+ M + P + L++A G++ + EA +L M
Sbjct: 587 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 646
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIK 352
+ GVKPDVVTY +LM V++ K V+ M G PD + +++ + L +K
Sbjct: 647 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMK 703
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 2/306 (0%)
Query: 61 FNKVLTSLVKTKHYSTA--ISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAG 118
++ V+ SL ++ + + L ++E ++ + +N +I + G + A +L
Sbjct: 235 YSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGM 294
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
G T T ++I L G+ A +++ G +Y L+ G K G
Sbjct: 295 AQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 354
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
A ++ ++ RG+ PD Y+ +ID+ A + EM A + PN +S
Sbjct: 355 LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR 414
Query: 239 LIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG 298
L+ GF G+ ++ +L EM + PD Y +++D GK + A M+ +G
Sbjct: 415 LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 474
Query: 299 VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
++PD VT+N+L+D +C A+++F AM +RG P +YNI+IN + D+
Sbjct: 475 IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534
Query: 359 NLLAEM 364
LL +M
Sbjct: 535 RLLGKM 540
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A++ F+RML P +N ++ K + A + ME G P T NI+IN
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y + + +L + +G P+ +T TTL+ G+ A++ +++ + G
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ Y LIN + G + A+ R + G+KP ++ N++I++ +D+ + AF +
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVL 642
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
M G+ P+VVTY+ L+ V + ++ + +EM + PD ++L AL
Sbjct: 643 QYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 93/236 (39%), Gaps = 42/236 (17%)
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y LI+ L G + E Q + + P + YN +I + ++ + A +L ++M
Sbjct: 170 YSILIHAL---GRSEKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMR 224
Query: 226 AKGISPNVVTYS-------------------------------------ALIYGFCIVGQ 248
G + V YS +I GF G
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNS 308
+A+ LL + T ++ AL G+ EA+ + + + G+KP YN+
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 309 LMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
L+ GY + A+ + + M +RG +PD H+Y+++I+ + A +L EM
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEM 400
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI M + P +N ++ + + A++ M G+KPSL+ +N LI
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N + + AF+VL + + G +PD +T+TTL+K L K Q+ +++++ G
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 161 LNQVSYGTLINGLCKLGETSAA 182
++ + L + L + +T A
Sbjct: 687 PDRKARSMLRSALRYMKQTLRA 708
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 148/307 (48%), Gaps = 6/307 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTG---IKPSLVTMNILINCYCHLGQINSAFSVLA 117
+ ++ L K + + L +M I+P L +L+ + + A VL
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRFASADMVKKAIEVLD 207
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+ K G++PD F L+ LC HG ++ A + +D+ + F +N + +L+ G C++G
Sbjct: 208 EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVG 266
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
+ A +L ++ G +PD+V Y ++ ++ A+DL +M +G PN Y+
Sbjct: 267 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYT 326
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
LI C V ++++A+ + EM + DV TYT LV K GK+ + +L MIK+
Sbjct: 327 VLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKK 386
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
G+ P +TY +M + + ++ M Q PD+ YN++I CK+ EA
Sbjct: 387 GLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEA 446
Query: 358 LNLLAEM 364
+ L EM
Sbjct: 447 VRLWNEM 453
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 1/292 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI + M + P + F +L +L K A L M +L L+
Sbjct: 202 AIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLY 260
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+C +G++ A VL + + G++PD + +T L+ G GK+ A D+ +GF
Sbjct: 261 GWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 320
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N Y LI LCK+ A+++ ++ + DVV Y ++ CK + + +
Sbjct: 321 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
+M+ KG+ P+ +TY ++ ++ + L+++M PD+ Y +++ K
Sbjct: 381 DDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKL 440
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
G+V+EA + M + G+ P V T+ +++G + +A D F M RG
Sbjct: 441 GEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 124/295 (42%), Gaps = 38/295 (12%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P I ++ +L+ + A L M G +P+ +LI C + ++ A V
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ + + D +T+T L+ G C GKI + DD++ +G + ++++Y ++ K
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
LEL+ +++ PD+ +YN +I CK V A L++EM G+SP V T
Sbjct: 405 KESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDT 464
Query: 236 YSALIYGFCIVGQLKQAIGLLDEM---GLKNID---------------------PDVYT- 270
+ +I G G L +A EM GL ++ DV++
Sbjct: 465 FVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSC 524
Query: 271 -------------YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
+TI + AL +G +EA + MI+ P T+ LM G
Sbjct: 525 ITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKG 579
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 198 VVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG---ISPNVVTYSALIYGFCIVGQLKQAIG 254
+ +Y +++ L K + + L EM + I P + + L+ F +K+AI
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLVQRFASADMVKKAIE 204
Query: 255 LLDEMGLKNIDPDVYTYTILVDALGKEGKVR----------------------------- 285
+LDEM +PD Y + L+DAL K G V+
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCR 264
Query: 286 -----EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
EAK +L M + G +PD+V Y +L+ GY ++ A D+ M +RG P+ +
Sbjct: 265 VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANC 324
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y ++I LCK+ +EA+ + EM
Sbjct: 325 YTVLIQALCKVDRMEEAMKVFVEM 348
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 148/298 (49%), Gaps = 4/298 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ ++ +L + K + L +M G +P+ VT N LI+ Y +N A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G +PD +T+ TLI G + A+ + + A G + +Y +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
AA +L + +G P++V YN ++D K + +A LY +M G P+ VTYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G L++A + EM KN PD Y +LVD GK G V +A M+ G++
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII----NGLCKIKMA 354
P+V T NSL+ + VN++ +A ++ M G P + +Y +++ +G K+ M
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 146/307 (47%), Gaps = 4/307 (1%)
Query: 59 FEFNKVLTSLVKTKHYSTAISLSHQMEFT-GIKPSLVTMNILINCYCHLGQINSAFSVLA 117
++ N+VL + Y A+ + ++ G K T ++ Q + +L
Sbjct: 332 YQANQVLKQM---NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLD 388
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+++ G QP+T+T+ LI + A+ + + G ++V+Y TLI+ K G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
A+++ +R+Q G+ PD Y+ II+ L K + A L+ EMV +G +PN+VTY+
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
++ + A+ L +M +PD TY+I+++ LG G + EA+ + M ++
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
PD Y L+D + V KA + AM G P+V + N +++ ++ EA
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 358 LNLLAEM 364
LL M
Sbjct: 629 YELLQNM 635
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 114/238 (47%), Gaps = 6/238 (2%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ FN+M + P + ++ K A+ + +M+ G+ P T +++I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKI---QRALQFHDDVLAQ 157
NC G + +A + ++ +G P+ +T+ ++ LH K Q AL+ + D+
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDMQNA 533
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
GF ++V+Y ++ L G A + +Q + PD +Y ++D K V A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
+ Y M+ G+ PNV T ++L+ F V ++ +A LL M + P + TYT+L+
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 137/313 (43%), Gaps = 41/313 (13%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ + RM +P F ++ ++ L K H A L +M G P+LVT NI+++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ +A + + G++PD +T++ +++ L G ++ A ++ + ++
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
++ YG L++ K G A + + + G++P+V N+++ + + ++ A++L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 222 SEMVAKGISPNVVTY-----------SALIYGFCIVGQLKQAIG---------------- 254
M+A G+ P++ TY S L GFC GQL + G
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFC--GQLMASTGHPAHMFLLKMPAAGPD 690
Query: 255 ----------LLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
LD M ++ + +VD L K G+ EA ++ V ++ V PD +
Sbjct: 691 GENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Query: 305 TYNSLMDGYCLVN 317
S Y L+N
Sbjct: 751 REKSC--SYWLIN 761
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 148/298 (49%), Gaps = 4/298 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ ++ +L + K + L +M G +P+ VT N LI+ Y +N A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G +PD +T+ TLI G + A+ + + A G + +Y +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
AA +L + +G P++V YN ++D K + +A LY +M G P+ VTYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G L++A + EM KN PD Y +LVD GK G V +A M+ G++
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII----NGLCKIKMA 354
P+V T NSL+ + VN++ +A ++ M G P + +Y +++ +G K+ M
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 146/307 (47%), Gaps = 4/307 (1%)
Query: 59 FEFNKVLTSLVKTKHYSTAISLSHQMEFT-GIKPSLVTMNILINCYCHLGQINSAFSVLA 117
++ N+VL + Y A+ + ++ G K T ++ Q + +L
Sbjct: 332 YQANQVLKQM---NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLD 388
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+++ G QP+T+T+ LI + A+ + + G ++V+Y TLI+ K G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
A+++ +R+Q G+ PD Y+ II+ L K + A L+ EMV +G +PN+VTY+
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
++ + A+ L +M +PD TY+I+++ LG G + EA+ + M ++
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
PD Y L+D + V KA + AM G P+V + N +++ ++ EA
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 358 LNLLAEM 364
LL M
Sbjct: 629 YELLQNM 635
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 114/238 (47%), Gaps = 6/238 (2%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ FN+M + P + ++ K A+ + +M+ G+ P T +++I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKI---QRALQFHDDVLAQ 157
NC G + +A + ++ +G P+ +T+ ++ LH K Q AL+ + D+
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDMQNA 533
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
GF ++V+Y ++ L G A + +Q + PD +Y ++D K V A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
+ Y M+ G+ PNV T ++L+ F V ++ +A LL M + P + TYT+L+
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 137/313 (43%), Gaps = 41/313 (13%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ + RM +P F ++ ++ L K H A L +M G P+LVT NI+++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ +A + + G++PD +T++ +++ L G ++ A ++ + ++
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
++ YG L++ K G A + + + G++P+V N+++ + + ++ A++L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 222 SEMVAKGISPNVVTY-----------SALIYGFCIVGQLKQAIG---------------- 254
M+A G+ P++ TY S L GFC GQL + G
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFC--GQLMASTGHPAHMFLLKMPAAGPD 690
Query: 255 ----------LLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
LD M ++ + +VD L K G+ EA ++ V ++ V PD +
Sbjct: 691 GENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Query: 305 TYNSLMDGYCLVN 317
S Y L+N
Sbjct: 751 REKSC--SYWLIN 761
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 148/298 (49%), Gaps = 4/298 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ ++ +L + K + L +M G +P+ VT N LI+ Y +N A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G +PD +T+ TLI G + A+ + + A G + +Y +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
AA +L + +G P++V YN ++D K + +A LY +M G P+ VTYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G L++A + EM KN PD Y +LVD GK G V +A M+ G++
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII----NGLCKIKMA 354
P+V T NSL+ + VN++ +A ++ M G P + +Y +++ +G K+ M
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 146/307 (47%), Gaps = 4/307 (1%)
Query: 59 FEFNKVLTSLVKTKHYSTAISLSHQMEFT-GIKPSLVTMNILINCYCHLGQINSAFSVLA 117
++ N+VL + Y A+ + ++ G K T ++ Q + +L
Sbjct: 332 YQANQVLKQM---NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLD 388
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+++ G QP+T+T+ LI + A+ + + G ++V+Y TLI+ K G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
A+++ +R+Q G+ PD Y+ II+ L K + A L+ EMV +G +PN+VTY+
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
++ + A+ L +M +PD TY+I+++ LG G + EA+ + M ++
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
PD Y L+D + V KA + AM G P+V + N +++ ++ EA
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 358 LNLLAEM 364
LL M
Sbjct: 629 YELLQNM 635
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 114/238 (47%), Gaps = 6/238 (2%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A++ FN+M + P + ++ K A+ + +M+ G+ P T +++I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKI---QRALQFHDDVLAQ 157
NC G + +A + ++ +G P+ +T+ ++ LH K Q AL+ + D+
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDMQNA 533
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
GF ++V+Y ++ L G A + +Q + PD +Y ++D K V A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
+ Y M+ G+ PNV T ++L+ F V ++ +A LL M + P + TYT+L+
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 137/313 (43%), Gaps = 41/313 (13%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ + RM +P F ++ ++ L K H A L +M G P+LVT NI+++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ +A + + G++PD +T++ +++ L G ++ A ++ + ++
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
++ YG L++ K G A + + + G++P+V N+++ + + ++ A++L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 222 SEMVAKGISPNVVTY-----------SALIYGFCIVGQLKQAIG---------------- 254
M+A G+ P++ TY S L GFC GQL + G
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFC--GQLMASTGHPAHMFLLKMPAAGPD 690
Query: 255 ----------LLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
LD M ++ + +VD L K G+ EA ++ V ++ V PD +
Sbjct: 691 GENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Query: 305 TYNSLMDGYCLVN 317
S Y L+N
Sbjct: 751 REKSC--SYWLIN 761
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 152/307 (49%), Gaps = 1/307 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + +N V+ VK+ A+ +M KP + T NILIN YC + + A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ ++G +P+ ++F TLI+G GKI+ ++ +++ G ++ + L++GLC+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G A L+ + + + P Y ++++ LC + A ++ E+ KG +P +
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
+ L+ G G+ ++A G +++M I PD T+ +L+ L +A + +
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL-CKIKMA 354
+G +PD TY+ L+ G+ + + + N M + PD+ +YN +++GL C K +
Sbjct: 431 SKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
Query: 355 DEALNLL 361
+ + +L
Sbjct: 491 RKQVRML 497
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 136/282 (48%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ + RM + + P + FN ++ ++ + A+ L +M+ G +P++V+ N LI
Sbjct: 212 ALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ G+I + +++ G + T L+ GLC G++ A D+L + L
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP 331
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
++ YG+L+ LC + A+E++ + +G P + T+++ L K A
Sbjct: 332 SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFM 391
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
+M+ GI P+ VT++ L+ C A L K +PD TY +LV KE
Sbjct: 392 EKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKE 451
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ 323
G+ +E + ++ M+ + + PD+ TYN LMDG + ++ Q
Sbjct: 452 GRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 126/275 (45%)
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ 149
KP++ N ++N Y G ++ A + K +PD TF LI G C K AL
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
++ +G N VS+ TLI G G+ +++ + G + ++D LC
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
++ V A L +++ K + P+ Y +L+ C + +A+ +++E+ K P
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
T LV+ L K G+ +A + M+ G+ PD VT+N L+ C + A +
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLA 429
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
S +G PD +Y+++++G K E L+ EM
Sbjct: 430 SSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEM 464
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 136/259 (52%), Gaps = 2/259 (0%)
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
G++ L+ I + G +PD T+ LI G G AL+ D+++ + V++
Sbjct: 132 GELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 167 GTLINGLCKLGETSAALELLRR-IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
GTLI+GLCK AL++ ++ G++P V +Y ++I +LC+ +S AF L E
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAY 250
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
I + YS LI G+ + +L+EM K PD TY +L++ E
Sbjct: 251 EGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
A +L M+++G+KPDV++YN ++ + + + +A +F M +RG +PD SY I+
Sbjct: 311 SANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVF 370
Query: 346 NGLCKIKMADEALNLLAEM 364
+GLC+ +EA +L EM
Sbjct: 371 DGLCEGLQFEEAAVILDEM 389
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ 149
KP T NILI+ G + A + ++K+ +P +TF TLI GLC +++ AL+
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 150 F-HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
HD + G Y +LI LC++GE S A +L IK D +Y+T+I SL
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
K + + EM KG P+ VTY+ LI GFC+ + A +LDEM K + PDV
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
+Y +++ + K EA + M ++G PD ++Y + DG C + +A + +
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 329 MSQRGETPDVHSYNIIINGLCK 350
M +G P + LC+
Sbjct: 389 MLFKGYKPRRDRLEGFLQKLCE 410
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 123/293 (41%), Gaps = 37/293 (12%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQM-EFTGIKPSLVTMNIL 99
DA+ F+ M++ P F ++ L K A+ + H M + G++P++ L
Sbjct: 170 DALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASL 229
Query: 100 INCYCHLGQINSAFS-----------------------------------VLAGILKRGY 124
I C +G+++ AF +L + ++G
Sbjct: 230 IKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGC 289
Query: 125 QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALE 184
+PDT+T+ LI G C+ + A + D+++ +G + +SY ++ ++ + A
Sbjct: 290 KPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATY 349
Query: 185 LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
L + RG PD + Y + D LC+ A + EM+ KG P + C
Sbjct: 350 LFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLC 409
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
G+L+ ++ + + I D +++++ + KE + ++ ++L +K+
Sbjct: 410 ESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCKEPVISDSIDLLLNTVKE 461
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 152/320 (47%), Gaps = 15/320 (4%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHY-STAISLSHQMEFTGIKPSLVTMNILINCYC 104
F R +++ P + + TSL K Y S A L +M G++P LI +C
Sbjct: 552 FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWC 611
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
+ + A ++ + PD T+T +I C + ++A +D+ + + V
Sbjct: 612 RVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVV 671
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y L+N + L++ R ++ + PDVV Y +I+ C + + L+ +M
Sbjct: 672 TYSVLLN-------SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDM 724
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
+ I P+VVTY+ L+ + K L EM ++ PDV+ YT+L+D K G +
Sbjct: 725 KRREIVPDVVTYTVLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDL 777
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
EAK + MI+ GV PD Y +L+ C + + +A+ +F+ M + G PDV Y +
Sbjct: 778 GEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTAL 837
Query: 345 INGLCKIKMADEALNLLAEM 364
I G C+ +A+ L+ EM
Sbjct: 838 IAGCCRNGFVLKAVKLVKEM 857
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 6/327 (1%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A+ FN+ML+ + +L + ++S A L + T I V N
Sbjct: 341 NIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYN 400
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+ + LG++ A + + +G PD I +TTLI G CL GK A ++
Sbjct: 401 VAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGT 460
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + V Y L GL G A E L+ ++ RG+KP V +N +I+ L + A
Sbjct: 461 GKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
Y + K + ++++ GFC G L A + L+ P +T+
Sbjct: 521 EAFYESLEHKSREND----ASMVKGFCAAGCLDHAFERF--IRLEFPLPKSVYFTLFTSL 574
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
++ + +A+++L M K GV+P+ Y L+ +C VN V KA++ F + + PD
Sbjct: 575 CAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+ +Y I+IN C++ +A L +M
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDM 661
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 14/291 (4%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+RM ++ P + K++ + + + A + I P L T I+IN YC
Sbjct: 588 LDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCR 647
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
L + A+++ + +R +PD +T++ L+ L ++ A + + V
Sbjct: 648 LNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVY 700
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y +IN C L + L + ++ R I PDVV Y ++ + +L EM
Sbjct: 701 YTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPERNLSREMK 753
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
A + P+V Y+ LI C +G L +A + D+M +DPD YT L+ K G ++
Sbjct: 754 AFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLK 813
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
EAK + MI+ GVKPDVV Y +L+ G C V KA + M ++G P
Sbjct: 814 EAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 36/335 (10%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+AI F M P + + ++ S A L +M+ TG P +V N+L
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH--------- 151
G AF L + RG +P +T +I+GL G++ +A F+
Sbjct: 474 GGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRE 533
Query: 152 -DDVLAQGFL------------------LNQVSYGTLINGLCKLGE-TSAALELLRRIQG 191
D + +GF L + Y TL LC + S A +LL R+
Sbjct: 534 NDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWK 593
Query: 192 RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQ 251
G++P+ MY +I + C+ V A + + +V K I P++ TY+ +I +C + + KQ
Sbjct: 594 LGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQ 653
Query: 252 AIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMD 311
A L ++M +++ PDV TY++L+++ + RE + V PDVV Y +++
Sbjct: 654 AYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAF-------DVIPDVVYYTIMIN 706
Query: 312 GYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
YC +N++ K +F M +R PDV +Y +++
Sbjct: 707 RYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK 741
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 126/256 (49%), Gaps = 4/256 (1%)
Query: 104 CHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ 163
C+ +I A SV+ + K G PD ++ +I+G + I +A+ + +L + +N
Sbjct: 302 CYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINC 361
Query: 164 VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
V +++ C++G S A +L + + I D V YN D+L K V A +L+ E
Sbjct: 362 VIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFRE 421
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGK 283
M KGI+P+V+ Y+ LI G C+ G+ A L+ EM PD+ Y +L L G
Sbjct: 422 MTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGL 481
Query: 284 VREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNI 343
+EA L +M +GVKP VT+N +++G E++KA+ + ++ + D
Sbjct: 482 AQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS---- 537
Query: 344 IINGLCKIKMADEALN 359
++ G C D A
Sbjct: 538 MVKGFCAAGCLDHAFE 553
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 147/323 (45%), Gaps = 4/323 (1%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F + P I N +++ ++ + + ++E G+ T +++
Sbjct: 170 FRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWR 229
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ-- 163
+L+ +L + + + I+GLCL+ A + L+++
Sbjct: 230 NDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSD 289
Query: 164 --VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
++Y ++ GLC A ++ ++ GI PDV +Y+ II+ K+ + A D++
Sbjct: 290 LGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVF 349
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
++M+ K N V S+++ +C +G +A L E NI D Y + DALGK
Sbjct: 350 NKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKL 409
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
GKV EA + M +G+ PDV+ Y +L+ G CL + + A D+ M G+TPD+ Y
Sbjct: 410 GKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIY 469
Query: 342 NIIINGLCKIKMADEALNLLAEM 364
N++ GL +A EA L M
Sbjct: 470 NVLAGGLATNGLAQEAFETLKMM 492
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 37/324 (11%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ KV+ L A S+ ME GI P + + +I + I A V +L
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKML 353
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
K+ + + + +++++ C G A + L++V Y + L KLG+
Sbjct: 354 KKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVE 413
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A+EL R + G+GI PDV+ Y T+I C S AFDL EM G +P++V Y+ L
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G G ++A L M + + P T+ ++++ L G++ +A+ + + +
Sbjct: 474 GGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRE 533
Query: 301 PDVVTYNSLMDGYCLV---------------------------------NEVNKAQDVFN 327
D S++ G+C + ++KAQD+ +
Sbjct: 534 NDA----SMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLD 589
Query: 328 AMSQRGETPDVHSYNIIINGLCKI 351
M + G P+ Y +I C++
Sbjct: 590 RMWKLGVEPEKSMYGKLIGAWCRV 613
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 18/266 (6%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N A F ++ P +F + ++ + + A +L M+ +KP +VT +
Sbjct: 615 NVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYS 674
Query: 98 ILINCYCHLGQIN--SAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
+L+N L AF V+ PD + +T +I C +++ D+
Sbjct: 675 VLLNSDPELDMKREMEAFDVI---------PDVVYYTIMINRYCHLNDLKKVYALFKDMK 725
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
+ + + V+Y L+ + L R ++ +KPDV Y +ID CK +
Sbjct: 726 RREIVPDVVTYTVLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLG 778
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A ++ +M+ G+ P+ Y+ALI C +G LK+A + D M + PDV YT L+
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKP 301
+ G V +A ++ M+++G+KP
Sbjct: 839 AGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%)
Query: 129 ITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRR 188
I + +++GLC +I+ A D+ G + Y +I G K A+++ +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 189 IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQ 248
+ + + + V+ ++I+ C+ S A+DL+ E IS + V Y+ +G+
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNS 308
+++AI L EM K I PDV YT L+ +GK +A +++ M G PD+V YN
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 309 LMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
L G +A + M RG P ++N++I GL D+A
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 164/333 (49%), Gaps = 13/333 (3%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
P +A + F + + P + + +L ++ K Y + S+ ++E +G K + N
Sbjct: 60 RPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFN 119
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+IN + G + A L + + G P T T+ TLIKG + GK +R+ + D +L +
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 158 GFL---LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS-LCKDKL 213
G + N ++ L+ CK + A E++++++ G++PD V YNTI + K +
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 214 VSHAFDLYSEMVAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYT 272
V ++ +MV K PN T ++ G+C G+++ + + M ++ ++ +
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 273 IL----VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
L V+ + ++G +L +M + VK DV+TY+++M+ + + KA VF
Sbjct: 300 SLINGFVEVMDRDG----IDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 355
Query: 329 MSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
M + G PD H+Y+I+ G + K +A LL
Sbjct: 356 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 388
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 148/304 (48%), Gaps = 3/304 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS- 114
P I FN ++ + K K A + +ME G++P VT N + CY G+ A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 115 -VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
V ++K +P+ T ++ G C G+++ L+F + N V + +LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
++ + E+L ++ +K DV+ Y+T++++ + A ++ EMV G+ P+
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 365
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
YS L G+ + K+A LL+ + +++ P+V +T ++ G + +A +
Sbjct: 366 HAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
M K GV P++ T+ +LM GY V + KA++V M G P+ ++ ++ +
Sbjct: 425 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGL 484
Query: 354 ADEA 357
DE+
Sbjct: 485 TDES 488
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 163/332 (49%), Gaps = 9/332 (2%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTS---LVKTKHYSTAISLSHQMEFTGIKPSLV 94
N DA+ +M ++ P +N ++ K + S + L + + P++
Sbjct: 130 NMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIR 189
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ--FHD 152
T N+L+ +C ++ A+ V+ + + G +PDT+T+ T+ G+ RA
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 153 DVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDK 212
V+ + N + G ++ G C+ G L +RR++ ++ ++V++N++I+ +
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 213 LVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYT 272
++ + M + +V+TYS ++ + G +++A + EM + PD + Y+
Sbjct: 310 DRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Query: 273 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR 332
IL + + ++A+ +L +I + +P+VV + +++ G+C ++ A VFN M +
Sbjct: 370 ILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKF 428
Query: 333 GETPDVHSYNIIINGLCKIKM---ADEALNLL 361
G +P++ ++ ++ G ++K A+E L ++
Sbjct: 429 GVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 460
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 128/274 (46%), Gaps = 44/274 (16%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
MN+LI G+ + A +V + + G++P I++TTL+ + +
Sbjct: 52 MNVLI----ERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTV--------------- 92
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
Q YG++ + ++ ++ G K D + +N +I++ + +
Sbjct: 93 -------QKQYGSISS-------------IVSEVEQSGTKLDSIFFNAVINAFSESGNME 132
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD---EMGLKNIDPDVYTYT 272
A +M G++P TY+ LI G+ I G+ +++ LLD E G ++ P++ T+
Sbjct: 133 DAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 273 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ-DVFNAMSQ 331
+LV A K+ KV EA ++ M + GV+PD VTYN++ Y E +A+ +V M
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 332 RGET-PDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + P+ + I++ G C+ + L + M
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
S L+N L + G A + + + G +P ++ Y T++ ++ K + SE+
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
G + + ++A+I F G ++ A+ L +M ++P TY L+ G GK
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 285 REAKNMLAVMIKQG---VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
+ +L +M+++G V P++ T+N L+ +C +V +A +V M + G PD +Y
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 342 NII 344
N I
Sbjct: 227 NTI 229
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 99/225 (44%), Gaps = 1/225 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D + RM +M + FN ++ V+ + M+ +K ++T + ++
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVM 337
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N + G + A V ++K G +PD ++ L KG + ++A + + ++ +
Sbjct: 338 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-R 396
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N V + T+I+G C G A+ + ++ G+ P++ + T++ + K A ++
Sbjct: 397 PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 456
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
M G+ P T+ L + + G ++ ++ + K+I+
Sbjct: 457 LQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIE 501
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 159/300 (53%), Gaps = 3/300 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLA--G 118
FN V+ S K A+S+ ++M G+ P++V+ N++I+ C G + A +L G
Sbjct: 221 FNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMG 280
Query: 119 ILKRGY-QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
++ + P+ +T+ ++I G C G++ A + D++ G N+ +YG L++ + G
Sbjct: 281 MMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAG 340
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
+ AL L + +G+ + V+YN+I+ L + + A + +M +K + + T +
Sbjct: 341 SSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQA 400
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
++ G C G +K+A+ ++ K + D+ + L+ ++ K+ A +L M+ Q
Sbjct: 401 IVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ 460
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
G+ D +++ +L+DGY ++ +A ++++ M + +T ++ YN I+NGL K MA A
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 161/327 (49%), Gaps = 7/327 (2%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTG---IKPSLVTMN 97
+A+S F RML+ P + FN ++ KT A+ L +M + P+ VT N
Sbjct: 236 EALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYN 295
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+IN +C G+++ A + ++K G + T+ L+ G AL+ D++ ++
Sbjct: 296 SVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G ++N V Y +++ L G+ A+ +LR + + ++ D ++ LC++ V A
Sbjct: 356 GLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEA 415
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+ ++ K + ++V ++ L++ F +L A +L M ++ + D ++ L+D
Sbjct: 416 VEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDG 475
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
KEGK+ A + MIK ++V YNS+++G A+ V NAM E D
Sbjct: 476 YLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM----EIKD 531
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+ +YN ++N K +EA ++L++M
Sbjct: 532 IVTYNTLLNESLKTGNVEEADDILSKM 558
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 137/277 (49%), Gaps = 9/277 (3%)
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKR----GYQPDTITFTTLIKGLCLHGKIQRALQF 150
++I+ N G+ S VL+G+++ G PD F +L++ +G Q A +
Sbjct: 113 ALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEV 170
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
+ A+GF ++ + + L + E ++ + + G +V +N +I S CK
Sbjct: 171 IEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCK 230
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN---IDPD 267
+ + A ++ M+ G+ PNVV+++ +I G C G ++ A+ LL +MG+ + + P+
Sbjct: 231 ESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPN 290
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
TY +++ K G++ A+ + M+K GV + TY +L+D Y ++A + +
Sbjct: 291 AVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCD 350
Query: 328 AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M+ +G + YN I+ L + A+++L +M
Sbjct: 351 EMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM 387
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 142/309 (45%), Gaps = 41/309 (13%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A+ L +M G+ + V N ++ G I A SVL + + Q D T +++
Sbjct: 345 ALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVR 404
Query: 137 GLCLHGKIQRALQFHDDV-----------------------------------LAQGFLL 161
GLC +G ++ A++F + L QG L
Sbjct: 405 GLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSL 464
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +S+GTLI+G K G+ ALE+ + ++V+YN+I++ L K + A +
Sbjct: 465 DAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVV 524
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV--YTYTILVDALG 279
+ M K ++VTY+ L+ G +++A +L +M ++ + V T+ I+++ L
Sbjct: 525 NAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLC 580
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
K G +AK +L M+++GV PD +TY +L+ + K ++ + + +G TP H
Sbjct: 581 KFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEH 640
Query: 340 SYNIIINGL 348
Y I+ L
Sbjct: 641 IYLSIVRPL 649
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
N ++ V+ K + A + M G+ ++ LI+ Y G++ A + G++K
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 122 RGYQPDTITFTTLIKGLCLHG------KIQRALQFHDDVLAQGFLLNQ------------ 163
+ + + +++ GL G + A++ D ++ LLN+
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKD-IVTYNTLLNESLKTGNVEEADD 553
Query: 164 ----------------VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
V++ +IN LCK G A E+L+ + RG+ PD + Y T+I S
Sbjct: 554 ILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITS 613
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
K + +L+ ++ +G++P+ Y +++
Sbjct: 614 FSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 58 IFEFNKVLTSLVKTKHYSTAIS-LSHQMEFTGIKP-SLVTMNILINCYCHLGQINSAFSV 115
I +N +L +KT + A LS + G K SLVT NI+IN C G A V
Sbjct: 532 IVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEV 591
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
L +++RG PD+IT+ TLI H ++ ++ HD ++ QG ++ Y +++ L
Sbjct: 592 LKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPL 649
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 151/301 (50%), Gaps = 2/301 (0%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
V+ + + AI + ME + P+LV N L++ C + A V + R
Sbjct: 174 VMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR- 232
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
+ PD+ T++ L++G + +A + +++ G + V+Y +++ LCK G AL
Sbjct: 233 FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 292
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
++R + KP +Y+ ++ + + + A D + EM G+ +V +++LI F
Sbjct: 293 GIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
C ++K +L EM K + P+ + I++ L + G+ EA ++ MIK +PD
Sbjct: 353 CKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDA 411
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
TY ++ +C E+ A V+ M ++G P +H+++++INGLC+ + +A LL E
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Query: 364 M 364
M
Sbjct: 472 M 472
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 134/296 (45%), Gaps = 19/296 (6%)
Query: 70 KTKHYSTAISLSHQM-EFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDT 128
K +HY ++ H M E T M LIN +++ +
Sbjct: 126 KQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINA-----------------MRKKKMLNV 168
Query: 129 ITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRR 188
TF +++ K+ A+ + + N V++ L++ LCK A E+
Sbjct: 169 ETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN 228
Query: 189 IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQ 248
++ R PD Y+ +++ K+ + A +++ EM+ G P++VTYS ++ C G+
Sbjct: 229 MRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGR 287
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNS 308
+ +A+G++ M P + Y++LV G E ++ EA + M + G+K DV +NS
Sbjct: 288 VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNS 347
Query: 309 LMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
L+ +C N + V M +G TP+ S NII+ L + DEA ++ +M
Sbjct: 348 LIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 403
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 151/327 (46%), Gaps = 8/327 (2%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+AI FN M + P + FN +L++L K+K+ A + M P T +IL+
Sbjct: 186 EAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILL 244
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + A V ++ G PD +T++ ++ LC G++ AL +
Sbjct: 245 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 304
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
Y L++ A++ ++ G+K DV ++N++I + CK + + + +
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
EM +KG++PN + + ++ G+ +A + +M +K +PD TYT+++ +
Sbjct: 365 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCE 423
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ ++ A + M K+GV P + T++ L++G C KA + M + G P +
Sbjct: 424 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 483
Query: 341 YNIIINGLCK------IKMADEALNLL 361
+ + L K +K +E +N+L
Sbjct: 484 FGRLRQLLIKEEREDVLKFLNEKMNVL 510
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
Query: 213 LVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYT 272
L+++ F +SE + +V Y +I + Q K L++ M K + +V T+
Sbjct: 115 LLTYRFFQWSEK-QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFC 172
Query: 273 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR 332
I++ + KV EA VM K + P++V +N L+ C V KAQ+VF M R
Sbjct: 173 IVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR 232
Query: 333 GETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
TPD +Y+I++ G K +A + EM
Sbjct: 233 F-TPDSKTYSILLEGWGKEPNLPKAREVFREM 263
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 133/249 (53%)
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L I +RGY PD+ TF + L + + D +++G Y L+ L
Sbjct: 343 LRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLN 402
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
S L+++ G+ V YN +ID LCK + + +A +EM +GISPN+VT
Sbjct: 403 AQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVT 462
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++ + G+ + G +K+ G+L+++ + PDV T++++++ L + ++++A + M+
Sbjct: 463 FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML 522
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
+ G++P+ +TYN L+ C + +++ +F M + G +PD+++YN I CK++
Sbjct: 523 EWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVK 582
Query: 356 EALNLLAEM 364
+A LL M
Sbjct: 583 KAEELLKTM 591
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 141/289 (48%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P FN ++ L+K + G+KP +L+ + + +
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L + G ++ +I LC +I+ A F ++ +G N V++ T ++G
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G+ +L ++ G KPDV+ ++ II+ LC+ K + AFD + EM+ GI PN +T
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+ LI C G +++ L +M + PD+Y Y + + K KV++A+ +L M+
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
+ G+KPD TY++L+ ++A+++F+++ + G PD ++ ++
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 143/319 (44%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F +M P F +N ++ + K AI L QME G +P++ T ILI+ +
Sbjct: 203 FQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLI 262
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G+++ A L + R P+ T T + G+ +A + + + L +V
Sbjct: 263 AGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVG 322
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y ++ L + LR+I RG PD +N + L K + ++ V
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFV 382
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
++G+ P Y L+ + + L +MG+ + VY+Y ++D L K ++
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
A L M +G+ P++VT+N+ + GY + +V K V + G PDV ++++II
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 346 NGLCKIKMADEALNLLAEM 364
N LC+ K +A + EM
Sbjct: 503 NCLCRAKEIKDAFDCFKEM 521
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 156/379 (41%), Gaps = 70/379 (18%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P +N V+ +LVK+ A QM G KP T NILI+ C G ++ A +
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL-- 173
+ + + G +P+ T+T LI G + G++ AL+ + + + N+ + T ++G+
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 174 ----CK--------------------------LGETSAALE---LLRRIQGRGIKPDVVM 200
CK L S A E LR+I RG PD
Sbjct: 298 CLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSST 357
Query: 201 YNTIIDSLCKDKLVSHAFDLYSEMVAKGISP----------------------------- 231
+N + L K + ++ V++G+ P
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 232 ------NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
+V +Y+A+I C +++ A L EM + I P++ T+ + G V+
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVK 477
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
+ +L ++ G KPDV+T++ +++ C E+ A D F M + G P+ +YNI+I
Sbjct: 478 KVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILI 537
Query: 346 NGLCKIKMADEALNLLAEM 364
C D ++ L A+M
Sbjct: 538 RSCCSTGDTDRSVKLFAKM 556
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%)
Query: 83 QMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHG 142
Q+ F G+KPS N +I+ ++ A+ + G +PD T+ LI G+C G
Sbjct: 170 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229
Query: 143 KIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYN 202
+ A++ + +G N +Y LI+G G AL+ L ++ R + P+
Sbjct: 230 VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIR 289
Query: 203 TIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLK 262
T + + + AF++ + K + V Y A++Y K+ L ++G +
Sbjct: 290 TFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGER 349
Query: 263 NIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKA 322
PD T+ + L K + E + + +GVKP Y L+ ++
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 323 QDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M G V+SYN +I+ LCK + + A L EM
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEM 451
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%)
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
Y D + L L G + +++ ++ G+ ++ LI +LG
Sbjct: 106 YAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCN 165
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
++ +I G+KP +YN +ID+L K + A+ + +M + G P+ TY+ LI+G
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
C G + +AI L+ +M + P+V+TYTIL+D G+V EA L +M + + P+
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
T + + G KA +V ++ Y+ ++ L MA E L +
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 364 M 364
+
Sbjct: 346 I 346
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA F ML+ P +N ++ S T ++ L +M+ G+ P L N I
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
+C + ++ A +L +L+ G +PD T++TLIK L G+ A + + G
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 143/286 (50%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ ++ +L + K + L +M G KP+ VT N LI+ Y + A +V +
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G +PD +T+ TLI G + A+ + + G + +Y +IN L K G
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
AA L + G+G P++V +N +I K + A LY +M G P+ VTYS ++
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G L++A G+ EM KN PD Y +LVD GK G V +A M++ G++
Sbjct: 542 EVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLR 601
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
P+V T NSL+ + V+ +++A ++ +M G P + +Y ++++
Sbjct: 602 PNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 134/260 (51%), Gaps = 3/260 (1%)
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
G+IN +L +++ G +P+T+T+ LI ++ A+ + + G ++V
Sbjct: 374 QFGEINK---LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRV 430
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y TLI+ K G A+++ +R+Q G+ PD Y+ II+ L K + A L+ EM
Sbjct: 431 TYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEM 490
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
V +G +PN+VT++ +I + A+ L +M PD TY+I+++ LG G +
Sbjct: 491 VGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFL 550
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
EA+ + A M ++ PD Y L+D + V+KA + AM Q G P+V + N +
Sbjct: 551 EEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSL 610
Query: 345 INGLCKIKMADEALNLLAEM 364
++ ++ EA NLL M
Sbjct: 611 LSTFLRVHRMSEAYNLLQSM 630
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N L + H+ A L M+ G PS ILI + + + V +
Sbjct: 161 YNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK 220
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
K G++P + ++ L +G AL ++D G + ++ L+ GLCK G
Sbjct: 221 KFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIE 280
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
LE+L+R++ KPDV Y +I +L + + + ++ EM I P+V+ Y L+
Sbjct: 281 EMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLV 340
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G C G++++ L EM K I D Y +L++ +GKVR A N+ ++ G
Sbjct: 341 VGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYI 400
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
D+ YN+++ G C VN+V+KA +F + PD + + I+
Sbjct: 401 ADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIM 445
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 156/344 (45%), Gaps = 36/344 (10%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ +M + P +F +N+++ +LVK ++ A+++ + G+ T IL+ C
Sbjct: 216 YEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCK 275
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G+I +L + + +PD +T +IK L G + +L+ D++ + ++
Sbjct: 276 AGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMA 335
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
YGTL+ GLCK G EL ++G+ I D +Y +I+ D V A +L+ ++V
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLV 395
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT--------------- 270
G ++ Y+A+I G C V Q+ +A L + ++PD T
Sbjct: 396 DSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLS 455
Query: 271 -YTILVDALGKEGK--------------VREAKNMLAV----MIKQGVKPDVVTYNSLMD 311
++ +++ +G+ G E KN +A+ ++K V YN LM+
Sbjct: 456 DFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILME 515
Query: 312 GYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
+ ++ K+ +F M + G PD SY+I I C ++ D
Sbjct: 516 ALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAI--CCFVEKGD 557
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 138/340 (40%), Gaps = 41/340 (12%)
Query: 57 PIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVL 116
PI F VL + K +++ +S + + PS+V + + + + + F
Sbjct: 93 PIARF--VLDAFRKNRNHWGPSVVSELNKLRRVTPSIVAEVLKLG---NDAAVAAKFFHW 147
Query: 117 AGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKL 176
AG ++GY+ D + L +G + A Q + + +QG ++ + LI
Sbjct: 148 AG-KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADN 206
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTY 236
+ +++ G KP V +YN I+D+L K+ A +Y + G+ T+
Sbjct: 207 RRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTF 266
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
L+ G C G++++ + +L M PDV+ YT ++ L EG + + + M +
Sbjct: 267 MILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRR 326
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR------------------------ 332
+KPDV+ Y +L+ G C V + ++F M +
Sbjct: 327 DEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRS 386
Query: 333 -----------GETPDVHSYNIIINGLCKIKMADEALNLL 361
G D+ YN +I GLC + D+A L
Sbjct: 387 ACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLF 426
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 150/354 (42%), Gaps = 37/354 (10%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
RM + P +F + ++ +LV + ++ + +M IKP ++ L+ C
Sbjct: 287 QRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKD 346
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
G++ + + + + D + LI+G GK++ A +D++ G++ + Y
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIY 406
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPD-----------VVM-----YNTIIDS--- 207
+I GLC + + A +L + ++PD VVM ++ +++
Sbjct: 407 NAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGE 466
Query: 208 ---------------LCKDKLV-SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQ 251
LC D+ + A D++ + KG +V Y+ L+ +G +++
Sbjct: 467 LGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQK 525
Query: 252 AIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMD 311
++ L EM +PD +Y+I + ++G V+ A + +I+ P + Y SL
Sbjct: 526 SLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTK 585
Query: 312 GYCLVNEVNKAQ-DVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
G C + E++ V + P Y + + +CK A++ + ++ EM
Sbjct: 586 GLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEM 639
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 11/212 (5%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH 151
S+ NIL+ +G I + S+ + K G++PD+ +++ I G ++ A FH
Sbjct: 506 SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFH 565
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGR-GIKPDVVMYNTIIDSLCK 210
+ ++ + + +Y +L GLC++GE A + L+R G P Y + +CK
Sbjct: 566 EKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCK 625
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNI--DPDV 268
+ EM +G+ N V Y A+I G G +K A + E+ + + + D+
Sbjct: 626 GSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADM 685
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
Y +E + + K A ++ G+K
Sbjct: 686 VVY--------EEMLIEQTKKKTADLVLSGIK 709
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%)
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
FH +G+ + +Y L + G AA +L + +G P + +I
Sbjct: 145 FHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHA 204
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
++ + +Y +M G P V Y+ ++ G A+ + ++ + +
Sbjct: 205 DNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEEST 264
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
T+ ILV L K G++ E +L M + KPDV Y +++ ++ + V++ M
Sbjct: 265 TFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEM 324
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ PDV +Y ++ GLCK + L EM
Sbjct: 325 RRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEM 359
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 119/276 (43%), Gaps = 8/276 (2%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N V+ L A L ++P T++ ++ Y + +++ +VL I
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIG 465
Query: 121 KRGYQPDTITFTTLIKGLCL-HGKIQRALQFHDDVLAQGFLLNQVS-YGTLINGLCKLGE 178
+ GY P + T K LC K AL + +G VS Y L+ L K+G+
Sbjct: 466 ELGY-PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGH--GSVSVYNILMEALYKMGD 522
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
+L L ++ G +PD Y+ I + V A + +++ P++ Y +
Sbjct: 523 IQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLS 582
Query: 239 LIYGFCIVGQLKQAIGLLDEMGLKNID--PDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
L G C +G++ A+ LL L N++ P + Y + V + K + ++ M +
Sbjct: 583 LTKGLCQIGEI-DAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQ 641
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR 332
+GV + V Y +++ G + A++VF + +R
Sbjct: 642 EGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKR 677
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 152/307 (49%), Gaps = 7/307 (2%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQ-MEFTGIKPSLVTMNILINCYC 104
F+ ML +P ++ +N +++ K + A + H+ + G+ P + T NIL++ C
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALC 165
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
G ++A + LK +P+ +T+ LI GLC ++ ++ G+ N V
Sbjct: 166 KSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAV 224
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y T++ K L+L +++ G D ++ +L K A++ E+
Sbjct: 225 TYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHEL 284
Query: 225 VAKGI-SPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGK 283
V G S ++V+Y+ L+ + G L LL+E+ +K + PD YT+TI+V+ L G
Sbjct: 285 VRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGN 344
Query: 284 VREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNI 343
A+ LA + + G++P VVT N L+DG C V++A +F +M E D +Y
Sbjct: 345 TGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM----EVRDEFTYTS 400
Query: 344 IINGLCK 350
+++ LCK
Sbjct: 401 VVHNLCK 407
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 157/314 (50%), Gaps = 6/314 (1%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + +N ++ + A +++ +M GI+P + T N LI+ +N +
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ-FHDDVLAQGFLLNQVSYGTLINGLC 174
+L G PD ++ TL+ G+ A + H+D+ G + +Y L++ LC
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALC 165
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
K G T A+EL + ++ R +KP+++ YN +I+ LCK + V + E+ G +PN V
Sbjct: 166 KSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAV 224
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
TY+ ++ + ++++ + L +M + D + +V AL K G+ EA + +
Sbjct: 225 TYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHEL 284
Query: 295 IKQGVKP-DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
++ G + D+V+YN+L++ Y ++ D+ + +G PD +++ II+NGL I
Sbjct: 285 VRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGN 344
Query: 354 ---ADEALNLLAEM 364
A++ L + EM
Sbjct: 345 TGGAEKHLACIGEM 358
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 2/231 (0%)
Query: 135 IKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGI 194
+ LC ++RA D + G L + ++Y TLI G + A + RR++ GI
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 195 KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIG 254
+PDV YN++I K+ +++ L+ EM+ G+SP++ +Y+ L+ + +G+ +A
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 255 LLDE-MGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY 313
+L E + L + P + TY IL+DAL K G A + +K VKP+++TYN L++G
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK-HLKSRVKPELMTYNILINGL 198
Query: 314 CLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
C V + + + G TP+ +Y ++ K K ++ L L +M
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 41/293 (13%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P I +N +L +L K+ H AI L ++ + +KP L+T NILIN C ++ S +
Sbjct: 152 PGIDTYNILLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVDWM 210
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ + K GY P+ +T+TT++K +I++ LQ + +G+ + + +++ L K
Sbjct: 211 MRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIK 270
Query: 176 LGETSAALELLRRIQGRGIKP-DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPN-- 232
G A E + + G + D+V YNT+++ KD + DL E+ KG+ P+
Sbjct: 271 TGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDY 330
Query: 233 ---------------------------------VVTYSALIYGFCIVGQLKQAIGLLDEM 259
VVT + LI G C G + +A+ L M
Sbjct: 331 THTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
++ D +TYT +V L K+G++ A +L +G+K +++ G
Sbjct: 391 EVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSG 439
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+ N ++SLCK + + A L + + G+ P+V+TY+ LI G+ + +A + M
Sbjct: 15 LLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 74
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
I+PDV TY L+ K + + M+ G+ PD+ +YN+LM Y +
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 320 NKAQDVFNA-MSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+A + + + G P + +YNI+++ LCK D A+ L +
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL 180
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 150/304 (49%), Gaps = 1/304 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N+++ K + + A L M+ ++ S+ T ILI Y G + A +
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G PD I F+ +I L + A F D L F + + Y L+ G C+ GE S
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS-LKDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A ++ + ++ GI+P+V Y+ +ID+LC+ +S A D++++M+ G +PN +T++ L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G+ ++ + + ++M +PD TY L++A ++ + A +L MIK+ +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
+ T+N++ +VN A +++ M + P+ +YNI++ K D L +
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 361 LAEM 364
EM
Sbjct: 453 KKEM 456
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 37/330 (11%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
+A+ FNRM P F+ V+++L + + S A S ++ +P ++ L
Sbjct: 203 SEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNL 261
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ +C G+I+ A V + G +P+ T++ +I LC G+I RA D+L G
Sbjct: 262 VRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGC 321
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD-------- 211
N +++ L+ K G T L++ +++ G +PD + YN +I++ C+D
Sbjct: 322 APNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVK 381
Query: 212 ---------------------------KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
+ V+ A +YS+M+ PN VTY+ L+ F
Sbjct: 382 VLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFV 441
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG-VKPDV 303
+ + EM K ++P+V TY +LV G A + M+++ + P +
Sbjct: 442 GSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSL 501
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
Y ++ ++ K +++ M Q+G
Sbjct: 502 SLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 117/245 (47%), Gaps = 1/245 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P ++ ++ V+ +L + S A + M +G P+ +T N L+ + G+ V
Sbjct: 288 PNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQV 347
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ K G +PDTIT+ LI+ C ++ A++ + ++ + +N ++ T+ + K
Sbjct: 348 YNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEK 407
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
+ + A + ++ +P+ V YN ++ K + EM K + PNV T
Sbjct: 408 KRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNT 467
Query: 236 YSALIYGFCIVGQLKQAIGLLDEM-GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
Y L+ FC +G A L EM K + P + Y +++ L + G++++ + ++ M
Sbjct: 468 YRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Query: 295 IKQGV 299
I++G+
Sbjct: 528 IQKGL 532
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 134/280 (47%)
Query: 85 EFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKI 144
E+ + S I+ Y + A +++ G +P L+ LC +
Sbjct: 130 EYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHV 189
Query: 145 QRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTI 204
A +F G + + +Y L+ G ++ + S A ++ + R D++ YN +
Sbjct: 190 NHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNAL 249
Query: 205 IDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNI 264
+D+LCK V + ++ EM G+ P+ +++ I+ +C G + A +LD M ++
Sbjct: 250 LDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDL 309
Query: 265 DPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQD 324
P+VYT+ ++ L K KV +A +L MI++G PD TYNS+M +C EVN+A
Sbjct: 310 VPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATK 369
Query: 325 VFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + M + PD H+YN+++ L +I D A + M
Sbjct: 370 LLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGM 409
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 150/313 (47%), Gaps = 5/313 (1%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P +A FNRM++ P + + +++L SL KH + A + + GI PS T +I
Sbjct: 154 PSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSI 213
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
L+ + + + A V +L+R D + + L+ LC G + + ++ G
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG 273
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
+ S+ I+ C G+ +A ++L R++ + P+V +N II +LCK++ V A+
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
L EM+ KG +P+ TY++++ C ++ +A LL M PD +TY +++ L
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV---FNAMSQRGET 335
+ G+ A + M ++ P V TY ++ G LV + K ++ F M G
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMIHG--LVRKKGKLEEACRYFEMMIDEGIP 451
Query: 336 PDVHSYNIIINGL 348
P + ++ N L
Sbjct: 452 PYSTTVEMLRNRL 464
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 132/274 (48%), Gaps = 1/274 (0%)
Query: 79 SLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGL 138
+ + +EF GIKP + ++ L++ C +N A G P T++ L++G
Sbjct: 160 AFNRMVEF-GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGW 218
Query: 139 CLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDV 198
A + D++L + +++ ++Y L++ LCK G+ ++ + + G+KPD
Sbjct: 219 ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDA 278
Query: 199 VMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 258
+ I + C V A+ + M + PNV T++ +I C ++ A LLDE
Sbjct: 279 YSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDE 338
Query: 259 MGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE 318
M K +PD +TY ++ +V A +L+ M + PD TYN ++ +
Sbjct: 339 MIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGR 398
Query: 319 VNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIK 352
++A +++ MS+R P V +Y ++I+GL + K
Sbjct: 399 FDRATEIWEGMSERKFYPTVATYTVMIHGLVRKK 432
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 165/354 (46%), Gaps = 30/354 (8%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
P +A + F + + P + + +L ++ K Y + S+ ++E +G K + N
Sbjct: 60 RPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFN 119
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+IN + G + A L + + G P T T+ TLIKG + GK +R+ + D +L +
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 158 GFL---LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS-LCKDKL 213
G + N ++ L+ CK + A E++++++ G++PD V YNTI + K +
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 214 VSHAFDLYSEMVAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP------ 266
V ++ +MV K PN T ++ G+C G+++ + + M ++
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 267 ---------------DVYTYTILVDALGKE----GKVREAKNMLAVMIKQGVKPDVVTYN 307
D T T+L+ + +E G + +L +M + VK DV+TY+
Sbjct: 300 SLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYS 359
Query: 308 SLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
++M+ + + KA VF M + G PD H+Y+I+ G + K +A LL
Sbjct: 360 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 413
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 149/329 (45%), Gaps = 28/329 (8%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS- 114
P I FN ++ + K K A + +ME G++P VT N + CY G+ A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 115 -VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
V ++K +P+ T ++ G C G+++ L+F + N V + +LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 174 CKL-------------------------GETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
++ G +++L ++ +K DV+ Y+T++++
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
+ A ++ EMV G+ P+ YS L G+ + K+A LL+ + +++ P+V
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNV 424
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
+T ++ G + +A + M K GV P++ T+ +LM GY V + KA++V
Sbjct: 425 VIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQM 484
Query: 329 MSQRGETPDVHSYNIIINGLCKIKMADEA 357
M G P+ ++ ++ + DE+
Sbjct: 485 MRGCGVKPENSTFLLLAEAWRVAGLTDES 513
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 128/274 (46%), Gaps = 44/274 (16%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
MN+LI G+ + A +V + + G++P I++TTL+ + +
Sbjct: 52 MNVLI----ERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTV--------------- 92
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
Q YG++ + ++ ++ G K D + +N +I++ + +
Sbjct: 93 -------QKQYGSISS-------------IVSEVEQSGTKLDSIFFNAVINAFSESGNME 132
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD---EMGLKNIDPDVYTYT 272
A +M G++P TY+ LI G+ I G+ +++ LLD E G ++ P++ T+
Sbjct: 133 DAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 273 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ-DVFNAMSQ 331
+LV A K+ KV EA ++ M + GV+PD VTYN++ Y E +A+ +V M
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 332 RGET-PDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + P+ + I++ G C+ + L + M
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
S L+N L + G A + + + G +P ++ Y T++ ++ K + SE+
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
G + + ++A+I F G ++ A+ L +M ++P TY L+ G GK
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 285 REAKNMLAVMIKQG---VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
+ +L +M+++G V P++ T+N L+ +C +V +A +V M + G PD +Y
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 342 NII 344
N I
Sbjct: 227 NTI 229
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 23/244 (9%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D + RM +M + FN ++ V+ M+ GI VT+ +L+
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEV------------MDRDGIDE--VTLTLLL 323
Query: 101 NCYCH----LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
+ +G VL + + + D IT++T++ G +++A Q +++
Sbjct: 324 MSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVK 383
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRR--IQGRGIKPDVVMYNTIIDSLCKDKLV 214
G + +Y L G + E A ELL ++ R P+VV++ T+I C + +
Sbjct: 384 AGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR---PNVVIFTTVISGWCSNGSM 440
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
A ++++M G+SPN+ T+ L++G+ V Q +A +L M + P+ T+ +L
Sbjct: 441 DDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 500
Query: 275 VDAL 278
+A
Sbjct: 501 AEAW 504
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 85/182 (46%), Gaps = 1/182 (0%)
Query: 84 MEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK 143
M+ +K ++T + ++N + G + A V ++K G +PD ++ L KG +
Sbjct: 346 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 405
Query: 144 IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
++A + + ++ + N V + T+I+G C G A+ + ++ G+ P++ + T
Sbjct: 406 PKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 464
Query: 204 IIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN 263
++ + K A ++ M G+ P T+ L + + G ++ ++ + K+
Sbjct: 465 LMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKD 524
Query: 264 ID 265
I+
Sbjct: 525 IE 526
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 1/304 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
F + + K A+ + M+ K + T+N L++ ++ VL L
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKL 290
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
K + P+ +T+T L+ G C + A + +D++ QG + V++ ++ GL + + S
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKS 350
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A++L ++ +G P+V Y +I CK + A + + +MV G+ P+ Y+ LI
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
GF +L LL EM K PD TY L+ + + A + MI+ ++
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIE 470
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
P + T+N +M Y + + V+ M ++G PD +SY ++I GL + EA
Sbjct: 471 PSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRY 530
Query: 361 LAEM 364
L EM
Sbjct: 531 LEEM 534
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 134/280 (47%), Gaps = 4/280 (1%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP + + +L + ++ A + + M G+KP +V N+++ + + A
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK 354
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ + +G P+ ++T +I+ C ++ A+++ DD++ G + Y LI G
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
+ ELL+ +Q +G PD YN +I + K+ HA +Y++M+ I P++
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIH 474
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
T++ ++ + + + + +EM K I PD +YT+L+ L EGK REA L M
Sbjct: 475 TFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 534
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+ +G+K ++ YN + ++F ++QR +
Sbjct: 535 LDKGMKTPLIDYNKFAADF----HRGGQPEIFEELAQRAK 570
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF 150
P+++T +L+N +C + + A + ++ +G +PD + +++GL K A++
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
+ ++G N SY +I CK A+E + G++PD +Y +I
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
K + ++L EM KG P+ TY+ALI + A + ++M I+P ++T
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
+ +++ + + + MIK+G+ PD +Y L+ G + +A M
Sbjct: 476 FNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML 535
Query: 331 QRGETPDVHSYN 342
+G + YN
Sbjct: 536 DKGMKTPLIDYN 547
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A +N M+ P I N +L L++++ S AI L H M+ G P++ + I+I
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+C + +A ++ G QPD +T LI G K+ + ++ +G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +Y LI + A + ++ I+P + +N I+ S + +
Sbjct: 436 PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAV 495
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+ EM+ KGI P+ +Y+ LI G G+ ++A L+EM
Sbjct: 496 WEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 534
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 190 QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
+ +G D YN+++ L K + + EM KG+ + T++ + F +
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKER 245
Query: 250 KQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
K+A+G+ + M V T L+D+LG+ +EA+ +L +K+ P+++TY L
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVL 304
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
++G+C V + +A ++N M +G PD+ ++N+++ GL + + +A+ L
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
+G + + TY++++ Q + + +L+EMG K + + T+TI + A + ++
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 247
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
A + +M K K V T N L+D +AQ +F+ + +R TP++ +Y +++N
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF-TPNMMTYTVLLN 306
Query: 347 GLCKIKMADEALNLLAEM 364
G C+++ EA + +M
Sbjct: 307 GWCRVRNLIEAARIWNDM 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFE-FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
D + + +Q PP + +N ++ + K A + ++M I+PS+ T N++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 479
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ Y +V ++K+G PD ++T LI+GL GK + A ++ +++L +G
Sbjct: 480 MKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
+ Y + G+ EL +R + G
Sbjct: 540 KTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 141/287 (49%), Gaps = 7/287 (2%)
Query: 80 LSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLC 139
+ EF GI LV + L+ C + A ++ +R + D ++ G C
Sbjct: 201 FERRKEF-GIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILNGWC 258
Query: 140 LHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVV 199
+ G + A +F D++A + VSYGT+IN L K G+ A+EL R + PDV
Sbjct: 259 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 318
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+ N +ID+LC K + A +++ E+ KG PNVVTY++L+ C + + ++ L++EM
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 378
Query: 260 GLK--NIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN 317
LK + P+ T++ L L + ++ +L M K + YN + Y +
Sbjct: 379 ELKGGSCSPNDVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWD 435
Query: 318 EVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ K +++++ M + G PD +Y I I+GL EAL+ EM
Sbjct: 436 KEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEM 482
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 118/226 (52%), Gaps = 4/226 (1%)
Query: 142 GKIQRALQFH---DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDV 198
GK++R +FH D++ + +N+ +Y L+N + A+ + R + GI D+
Sbjct: 154 GKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDL 213
Query: 199 VMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 258
V ++ ++ LC+ K V A L+ + ++ + ++ G+C++G + +A +
Sbjct: 214 VAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKD 272
Query: 259 MGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE 318
+ PDV +Y +++AL K+GK+ +A + M PDV N+++D C
Sbjct: 273 IIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKR 332
Query: 319 VNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ +A +VF +S++G P+V +YN ++ LCKI+ ++ L+ EM
Sbjct: 333 IPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 378
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 132/301 (43%), Gaps = 39/301 (12%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISL--SHQMEFTGIKPSLVTMNI 98
+A+ F R + + F+ +L L + KH A +L S + EF + MN+
Sbjct: 196 EAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC---DIKAMNM 252
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
++N +C LG ++ A I+ +PD +++ T+I L GK+ +A++ + +
Sbjct: 253 ILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTR 312
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
+ +I+ LC ALE+ R I +G P+VV YN+++ LCK + +
Sbjct: 313 RNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVW 372
Query: 219 DLYSEMVAKG--ISPNVVTYSALI-YG-------------------------------FC 244
+L EM KG SPN VT+S L+ Y +
Sbjct: 373 ELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYV 432
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
+ ++ + EM + PD TYTI + L +GK+ EA + M+ +G+ P+
Sbjct: 433 QWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPR 492
Query: 305 T 305
T
Sbjct: 493 T 493
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 106/240 (44%), Gaps = 7/240 (2%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N +A + ++ P + + ++ +L K A+ L M T P + N
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+I+ C +I A V I ++G P+ +T+ +L+K LC + ++ + +++ +
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Query: 158 GFLL--NQVSYGTLINGLCKLGETSAALEL-LRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
G N V++ L+ K + S +++ L R+ + +YN + +
Sbjct: 382 GGSCSPNDVTFSYLL----KYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKE 437
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
+++SEM G+ P+ TY+ I+G G++ +A+ EM K + P+ T +L
Sbjct: 438 EKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 34/200 (17%)
Query: 199 VMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 258
++YN I+D L K + ++ EM + N TY L+ + ++ +A+G+ +
Sbjct: 144 MLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFER 203
Query: 259 MGLKNIDPDV------------YTYTILVDAL----GKE------------------GKV 284
ID D+ Y + + L +E G V
Sbjct: 204 RKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNV 263
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
EAK +I +PDVV+Y ++++ ++ KA +++ AM PDV N +
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 345 INGLCKIKMADEALNLLAEM 364
I+ LC K EAL + E+
Sbjct: 324 IDALCFKKRIPEALEVFREI 343
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 125/258 (48%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D + F + P +N +L SL+ K Y + QM G P ++T NI++
Sbjct: 205 DVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM 264
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
LG+ + + +L ++K G+ PD T+ L+ L K AL + + G
Sbjct: 265 FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVE 324
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ + TLI+GL + G+ A + G PDVV Y +I + A ++
Sbjct: 325 PGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEM 384
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM KG PNV TY+++I GFC+ G+ K+A LL EM + +P+ Y+ LV+ L
Sbjct: 385 FKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKN 444
Query: 281 EGKVREAKNMLAVMIKQG 298
GKV EA ++ M+++G
Sbjct: 445 AGKVLEAHEVVKDMVEKG 462
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 16/276 (5%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
++L+ + G+ + ++ ++K GY TF LI C G+ A DV+
Sbjct: 156 HLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLA----RDVVE 208
Query: 157 QGFLLNQV--------SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
Q F+ ++ SY +++ L + + + ++ G PDV+ YN ++ +
Sbjct: 209 Q-FIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFAN 267
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
+ + L EMV G SP++ TY+ L++ + A+ LL+ M ++P V
Sbjct: 268 FRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV 327
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
+T L+D L + GK+ K + +K G PDVV Y ++ GY E+ KA+++F
Sbjct: 328 IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKE 387
Query: 329 MSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M+++G+ P+V +YN +I G C EA LL EM
Sbjct: 388 MTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 6/295 (2%)
Query: 73 HYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKR---GYQPDTI 129
Y L +M G + T N+LI C G+ A V+ +K Y+P
Sbjct: 167 EYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKH 223
Query: 130 TFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRI 189
++ ++ L + + ++ +L GF + ++Y ++ +LG+T LL +
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM 283
Query: 190 QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
G PD+ YN ++ L A +L + M G+ P V+ ++ LI G G+L
Sbjct: 284 VKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 250 KQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
+ +DE PDV YT+++ G++ +A+ M M ++G P+V TYNS+
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ G+C+ + +A + M RG P+ Y+ ++N L EA ++ +M
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%)
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
V +L+ G+ PD +T+ ++ GK R + D+++ GF + +Y L++ L
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
+ AAL LL ++ G++P V+ + T+ID L + + E V G +P+VV
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
Y+ +I G+ G+L++A + EM K P+V+TY ++ GK +EA +L M
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
+G P+ V Y++L++ +V +A +V M ++G
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 71/155 (45%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P A++ N M ++ P + F ++ L + + G P +V +
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
+I Y G++ A + + ++G P+ T+ ++I+G C+ GK + A ++ ++G
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
N V Y TL+N L G+ A E+++ + +G
Sbjct: 428 CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 80/185 (43%)
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y L+ + GE A L+ + G +N +I + + L + + +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
P +Y+A+++ V Q K + ++M PDV TY I++ A + GK
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
+L M+K G PD+ TYN L+ N+ A ++ N M + G P V + +I
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 346 NGLCK 350
+GL +
Sbjct: 335 DGLSR 339
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 41 DAISHF-NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
+A +F + +++ TP + + ++T + A + +M G P++ T N +
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I +C G+ A ++L + RG P+ + ++TL+ L GK+ A + D++ +G
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
Query: 160 LLNQVS 165
++ +S
Sbjct: 464 YVHLIS 469
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 144/289 (49%), Gaps = 4/289 (1%)
Query: 77 AISLSHQMEFTGIKPSLVTMN-ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLI 135
AI + + ++ GI S+VT N +L+ C +++ + + +++ + + I LI
Sbjct: 164 AIEVYNVLKDMGISSSVVTCNSVLLGCL-KARKLDRFWELHKEMVESEFDSERIR--CLI 220
Query: 136 KGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIK 195
+ LC G + + L QG Q Y LI+G C++G + E+L +
Sbjct: 221 RALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHF 280
Query: 196 PDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGL 255
P + +Y II LC +K A+ ++ + KG +P+ V Y+ +I GFC G L A L
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 256 LDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCL 315
EM K + P+ + Y +++ K G++ + M++ G +++ N+++ G+C
Sbjct: 341 WFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCS 400
Query: 316 VNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ ++A ++F MS+ G TP+ +YN +I G CK ++ L L E+
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 142/326 (43%), Gaps = 14/326 (4%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQM---EFTGIKPSLVTMN 97
+AI +N + M + + N VL +K + L +M EF + +
Sbjct: 163 EAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSER-----IR 217
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LI C G ++ + +L LK+G P + LI G C G + ++A
Sbjct: 218 CLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAW 277
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ Y +I GLC + A + + ++ +G PD V+Y T+I C+ + A
Sbjct: 278 NHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSA 337
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L+ EM+ KG+ PN Y+ +I+G G++ +EM + + ++
Sbjct: 338 RKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
GK EA + M + GV P+ +TYN+L+ G+C N+V K ++ + G P
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPS 457
Query: 338 VHSYNIIINGLCKIKMADE---ALNL 360
+Y ++ L KM+D +LNL
Sbjct: 458 GMAYAALVRNL---KMSDSVATSLNL 480
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 193 GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQA 252
G KP+ + + L ++ LV A ++Y+ + GIS +VVT ++++ G +L +
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 253 IGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
L EM D + L+ AL G V E +L +KQG+ P Y L+ G
Sbjct: 200 WELHKEMVESEFDSE--RIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257
Query: 313 YCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
+C + +V + M P ++ Y II GLC K EA
Sbjct: 258 FCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEA 302
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 65/134 (48%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G A + M++ P F +N ++ K S + ++M G ++++ N +
Sbjct: 335 GSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTM 394
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I +C G+ + AF + + + G P+ IT+ LIKG C K+++ L+ + ++ A G
Sbjct: 395 IKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGL 454
Query: 160 LLNQVSYGTLINGL 173
+ ++Y L+ L
Sbjct: 455 KPSGMAYAALVRNL 468
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 126/257 (49%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ F + P +N +L SL+ K Y + QM G P ++T NIL+
Sbjct: 203 AVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLW 262
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
LG+++ + + + G+ PD+ T+ L+ L K AL + + G
Sbjct: 263 TNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ + Y TLI+GL + G A L + G +PDVV Y +I + A +++
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMF 382
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM KG PNV TY+++I G C+ G+ ++A LL EM + +P+ Y+ LV L K
Sbjct: 383 REMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKA 442
Query: 282 GKVREAKNMLAVMIKQG 298
GK+ EA+ ++ M+K+G
Sbjct: 443 GKLSEARKVIREMVKKG 459
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 123/244 (50%)
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ 149
+P + N ++N + Q V +L+ G+ PD +T+ L+ GK+ R +
Sbjct: 216 RPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDR 275
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
D++ GF + +Y L++ L K + AAL L ++ GI P V+ Y T+ID L
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
+ + EMV G P+VV Y+ +I G+ + G+L +A + EM +K P+V+
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
TY ++ L G+ REA +L M +G P+ V Y++L+ ++++A+ V M
Sbjct: 396 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Query: 330 SQRG 333
++G
Sbjct: 456 VKKG 459
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)
Query: 130 TFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRI 189
++ L+K G+ + + D+++ GF ++ LI + G A+ +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 190 QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
+ +P YN I++SL K +Y +M+ G SP+V+TY+ L++ +G++
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 250 KQAIGLLDEMGLKNIDPDVYT-----------------------------------YTIL 274
+ L DEM PD YT YT L
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+D L + G + K L M+K G +PDVV Y ++ GY + E++KA+++F M+ +G+
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 335 TPDVHSYNIIINGLCKIKMADEALNLLAEM 364
P+V +YN +I GLC EA LL EM
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEM 420
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 127/295 (43%), Gaps = 6/295 (2%)
Query: 73 HYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKR---GYQPDTI 129
Y L +M G + T N+LI C G+ A + +K Y+P
Sbjct: 164 EYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAVVQFMKSKTFNYRPFKH 220
Query: 130 TFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRI 189
++ ++ L + + + +L GF + ++Y L+ +LG+ L +
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEM 280
Query: 190 QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
G PD YN ++ L K A + M GI P+V+ Y+ LI G G L
Sbjct: 281 ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL 340
Query: 250 KQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
+ LDEM PDV YT+++ G++ +AK M M +G P+V TYNS+
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSM 400
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ G C+ E +A + M RG P+ Y+ +++ L K EA ++ EM
Sbjct: 401 IRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 77/155 (49%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P A++ N M ++ P + + ++ L + + +M G +P +V +
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
+I Y G+++ A + + +G P+ T+ ++I+GLC+ G+ + A ++ ++G
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
N V Y TL++ L K G+ S A +++R + +G
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 1/304 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
F + + K A+ + M+ K + T+N L++ ++ VL L
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKL 290
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
K + P+ +T+T L+ G C + A + +D++ G + V++ ++ GL + + S
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 350
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A++L ++ +G P+V Y +I CK + A + + +MV G+ P+ Y+ LI
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
GF +L LL EM K PD TY L+ + + + MI+ ++
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 470
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
P + T+N +M Y + + V++ M ++G PD +SY ++I GL + EA
Sbjct: 471 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 530
Query: 361 LAEM 364
L EM
Sbjct: 531 LEEM 534
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 133/280 (47%), Gaps = 4/280 (1%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP + + +L + ++ A + + M G+KP +V N+++ + + A
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 354
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ + +G P+ ++T +I+ C ++ A+++ DD++ G + Y LI G
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
+ ELL+ +Q +G PD YN +I + K+ H +Y++M+ I P++
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 474
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
T++ ++ + + + + DEM K I PD +YT+L+ L EGK REA L M
Sbjct: 475 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 534
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+ +G+K ++ YN + ++F ++QR +
Sbjct: 535 LDKGMKTPLIDYNKFAADF----HRGGQPEIFEELAQRAK 570
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
+G + TY++++ Q + + +L+EMG K + + T+TI + A + ++
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 247
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
A + +M K K V T N L+D +AQ +F+ + +R TP++ +Y +++N
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF-TPNMMTYTVLLN 306
Query: 347 GLCKIKMADEALNLLAEM 364
G C+++ EA + +M
Sbjct: 307 GWCRVRNLIEAARIWNDM 324
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFE-FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
D + + +Q PP + +N ++ + K + ++M I+PS+ T N++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ Y +V ++K+G PD ++T LI+GL GK + A ++ +++L +G
Sbjct: 480 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
+ Y + G+ EL +R + G
Sbjct: 540 KTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 1/304 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
F + + K A+ + M+ K + T+N L++ ++ VL L
Sbjct: 231 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKL 289
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
K + P+ +T+T L+ G C + A + +D++ G + V++ ++ GL + + S
Sbjct: 290 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 349
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A++L ++ +G P+V Y +I CK + A + + +MV G+ P+ Y+ LI
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
GF +L LL EM K PD TY L+ + + + MI+ ++
Sbjct: 410 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 469
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
P + T+N +M Y + + V++ M ++G PD +SY ++I GL + EA
Sbjct: 470 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 529
Query: 361 LAEM 364
L EM
Sbjct: 530 LEEM 533
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 133/280 (47%), Gaps = 4/280 (1%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP + + +L + ++ A + + M G+KP +V N+++ + + A
Sbjct: 294 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 353
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ + +G P+ ++T +I+ C ++ A+++ DD++ G + Y LI G
Sbjct: 354 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 413
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
+ ELL+ +Q +G PD YN +I + K+ H +Y++M+ I P++
Sbjct: 414 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 473
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
T++ ++ + + + + DEM K I PD +YT+L+ L EGK REA L M
Sbjct: 474 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 533
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+ +G+K ++ YN + ++F ++QR +
Sbjct: 534 LDKGMKTPLIDYNKFAADF----HRGGQPEIFEELAQRAK 569
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Query: 190 QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
+ +G D YN+++ L K + + EM KG+ + T++ + F +
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 244
Query: 250 KQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
K+A+G+ + M V T L+D+LG+ +EA+ +L +K+ P+++TY L
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVL 303
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
++G+C V + +A ++N M G PD+ ++N+++ GL + +A+ L
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
+G + + TY++++ Q + + +L+EMG K + + T+TI + A + ++
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 246
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
A + +M K K V T N L+D +AQ +F+ + +R TP++ +Y +++N
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF-TPNMMTYTVLLN 305
Query: 347 GLCKIKMADEALNLLAEM 364
G C+++ EA + +M
Sbjct: 306 GWCRVRNLIEAARIWNDM 323
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFE-FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
D + + +Q PP + +N ++ + K + ++M I+PS+ T N++
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 478
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ Y +V ++K+G PD ++T LI+GL GK + A ++ +++L +G
Sbjct: 479 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
+ Y + G+ EL +R + G
Sbjct: 539 KTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 572
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 140/296 (47%), Gaps = 3/296 (1%)
Query: 69 VKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDT 128
+ + AI H+ME G K N +++ + A V + K+ ++PD
Sbjct: 173 ARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDI 232
Query: 129 ITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRR 188
++T L++G + R + + ++ +GF + V+YG +IN CK + A+
Sbjct: 233 KSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 189 IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQ 248
++ R KP ++ ++I+ L +K ++ A + + + G TY+AL+ +C +
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNS 308
++ A +DEM LK + P+ TY I++ L + + +EA + M +P V TY
Sbjct: 353 MEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEI 409
Query: 309 LMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ +C ++ A +++ M +G P +H ++ +I LC DEA EM
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM 465
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 122/264 (46%), Gaps = 3/264 (1%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N GDA F++M + P I + +L + + ++ +M+ G +P +V
Sbjct: 212 NVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYG 271
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
I+IN +C + A + +R +P F +LI GL K+ AL+F + +
Sbjct: 272 IIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSS 331
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
GF L +Y L+ C A + + ++ +G+ P+ Y+ I+ L + + A
Sbjct: 332 GFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEA 391
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+++Y M P V TY ++ FC +L AI + DEM K + P ++ ++ L+ A
Sbjct: 392 YEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA 448
Query: 278 LGKEGKVREAKNMLAVMIKQGVKP 301
L E K+ EA M+ G++P
Sbjct: 449 LCHENKLDEACEYFNEMLDVGIRP 472
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 152/324 (46%), Gaps = 3/324 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+AI F++M + +FN++L +L K+++ A + +M+ +P + + IL+
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + V + G++PD + + +I C K + A++F +++ +
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCK 299
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ + +LINGL + + ALE R + G + YN ++ + C + + A+
Sbjct: 300 PSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKT 359
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
EM KG+ PN TY +++ + + K+A + M + +P V TY I+V
Sbjct: 360 VDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCN 416
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+ ++ A + M +GV P + ++SL+ C N++++A + FN M G P H
Sbjct: 417 KERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHM 476
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
++ + L D+ +L+ +M
Sbjct: 477 FSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 121/277 (43%), Gaps = 1/277 (0%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
G K + N LI + Q +S L +K TF + + K++ A
Sbjct: 123 GFKHTTSNYNALIESLGKIKQFKLIWS-LVDDMKAKKLLSKETFALISRRYARARKVKEA 181
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
+ + GF + + +++ L K A ++ +++ + +PD+ Y +++
Sbjct: 182 IGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG 241
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
++ + ++ EM +G P+VV Y +I C + ++AI +EM +N P
Sbjct: 242 WGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPS 301
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
+ + L++ LG E K+ +A G + TYN+L+ YC + A +
Sbjct: 302 PHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVD 361
Query: 328 AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M +G P+ +Y+II++ L +++ + EA + M
Sbjct: 362 EMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM 398
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 7/176 (3%)
Query: 192 RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQ 251
+G K YN +I+SL K K + L +M AK + T++ + + ++K+
Sbjct: 122 KGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSK-ETFALISRRYARARKVKE 180
Query: 252 AIGL---LDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNS 308
AIG ++E G K D + ++D L K V +A+ + M K+ +PD+ +Y
Sbjct: 181 AIGAFHKMEEFGFKMESSD---FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 237
Query: 309 LMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
L++G+ + + +V M G PDV +Y IIIN CK K +EA+ EM
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEM 293
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 3/270 (1%)
Query: 92 SLVTMNILINCYCHLGQINSA---FSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL 148
L + +L++ C G + A + G + + P F L+ G K+++A
Sbjct: 211 ELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAE 270
Query: 149 QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
+ +++ A V+YGTLI G C++ A+E+L ++ ++ + +++N IID L
Sbjct: 271 KLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGL 330
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
+ +S A + P +VTY++L+ FC G L A +L M + +DP
Sbjct: 331 GEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTT 390
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
TY K K E N+ +I+ G PD +TY+ ++ C +++ A V
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKE 450
Query: 329 MSQRGETPDVHSYNIIINGLCKIKMADEAL 358
M RG PD+ + ++I+ LC+++M +EA
Sbjct: 451 MKNRGIDPDLLTTTMLIHLLCRLEMLEEAF 480
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + FN +L +++ A L +M+ +KP++VT LI YC + ++ A V
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L + + + + F +I GL G++ AL + V+Y +L+ CK
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G+ A ++L+ + RG+ P YN K +LY +++ G SP+ +T
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y ++ C G+L A+ + EM + IDPD+ T T+L+ L + + EA +
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV 487
Query: 296 KQGVKPDVVTYNSLMDG 312
++G+ P +T+ + +G
Sbjct: 488 RRGIIPQYITFKMIDNG 504
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 133/306 (43%), Gaps = 37/306 (12%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN---ILINCYCHLGQINSAFSVLA 117
F+ V+ SL K + + A SL + +LV+ + +LI Y G + A + A
Sbjct: 138 FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQA--IRA 195
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
R Y+P +C R L+ L++ LCK G
Sbjct: 196 FEFARSYEP-----------VCKSATELRLLE------------------VLLDALCKEG 226
Query: 178 ETSAALELLRRIQG---RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
A L RI G P V ++N +++ + + + A L+ EM A + P VV
Sbjct: 227 HVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVV 286
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
TY LI G+C + +++ A+ +L+EM + ++ + + ++D LG+ G++ EA M+
Sbjct: 287 TYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERF 346
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
P +VTYNSL+ +C ++ A + M RG P +YN K
Sbjct: 347 FVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKT 406
Query: 355 DEALNL 360
+E +NL
Sbjct: 407 EEGMNL 412
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 134/274 (48%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF 150
PS+ NIL+N + ++ A + + +P +T+ TLI+G C ++Q A++
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
+++ +N + + +I+GL + G S AL ++ R P +V YN+++ + CK
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
+ A + M+ +G+ P TY+ F + ++ + L ++ PD T
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
Y +++ L ++GK+ A + M +G+ PD++T L+ C + + +A + F+
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV 487
Query: 331 QRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+RG P ++ +I NGL M+D A L + M
Sbjct: 488 RRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
+A+ R S P I +N ++ + K A + M G+ P+ T N
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ + ++ +++ G+ PD +T+ ++K LC GK+ A+Q + ++ +G
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+ ++ LI+ LC+L A E RGI P + + I + L + A
Sbjct: 457 DPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKR 516
Query: 220 LYSEM 224
L S M
Sbjct: 517 LSSLM 521
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 142/313 (45%), Gaps = 6/313 (1%)
Query: 51 QMPS---TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
+MPS + +F + ++ + + Y T++ L +M+ I PS++T N +IN C G
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARG 224
Query: 108 QINSA--FSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
++ + A + G QPD +T+ TL+ + G A + G + + +
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y L+ KL +LL + G PD+ YN ++++ K + A ++ +M
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
A G +PN TYS L+ F G+ L EM N DPD TY IL++ G+ G +
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
E + M+++ ++PD+ TY ++ A+ + M+ P +Y +I
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 346 NGLCKIKMADEAL 358
+ + +EAL
Sbjct: 465 EAFGQAALYEEAL 477
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ 149
KP+ I+I+ G ++ V + +G ++T LI +G+ + +L+
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLG-ETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
D + + + ++Y T+IN + G + L L ++ GI+PD+V YNT++ +
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
L A ++ M GI P++ TYS L+ F + +L++ LL EM PD+
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
+Y +L++A K G ++EA + M G P+ TY+ L++ + + + +F
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 329 MSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M PD +YNI+I + E + L +M
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 124/248 (50%), Gaps = 8/248 (3%)
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
+ K Y D + + L G I R L D+ LN + + G+
Sbjct: 67 VEKGKYSYDVESLINKLSSLPPRGSIARCL----DIFKNKLSLND--FALVFKEFAGRGD 120
Query: 179 TSAALELLRRIQGR-GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
+L L + +Q + KP+ +Y +I L ++ L+ +++ EM ++G+S +V +Y+
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA-KNMLAVMIK 296
ALI + G+ + ++ LLD M + I P + TY +++A + G E + A M
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADE 356
+G++PD+VTYN+L+ + ++A+ VF M+ G PD+ +Y+ ++ K++ ++
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 357 ALNLLAEM 364
+LL EM
Sbjct: 301 VCDLLGEM 308
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 134/311 (43%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
S P I +N +L + K+ A+ + HQM+ G P+ T ++L+N + G+ +
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR 372
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
+ + PD T+ LI+ G + + D++ + + +Y +I
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
K G A ++L+ + I P Y +I++ + L A ++ M G +P++
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
T+ +L+Y F G +K++ +L + I + T+ ++A + GK EA
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
M K PD T +++ Y V++ ++ F M P + Y +++ K +
Sbjct: 553 MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTER 612
Query: 354 ADEALNLLAEM 364
D+ LL EM
Sbjct: 613 WDDVNELLEEM 623
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 130/319 (40%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M P I +N +L++ A + M GI P L T + L+ +
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
L ++ +L + G PD ++ L++ G I+ A+ + A G N +
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT 354
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y L+N + G +L ++ PD YN +I+ + L+ +MV
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
+ I P++ TY +I+ G + A +L M +I P YT +++A G+
Sbjct: 415 EENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYE 474
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
EA M + G P + T++SL+ + V +++ + + + G + ++N I
Sbjct: 475 EALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQI 534
Query: 346 NGLCKIKMADEALNLLAEM 364
+ +EA+ +M
Sbjct: 535 EAYKQGGKFEEAVKTYVDM 553
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 127/309 (41%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + ++ ++ + K + L +M G P + + N+L+ Y G I A V
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ G P+ T++ L+ G+ Q ++ + + +Y LI +
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G + L + I+PD+ Y II + K L A + M A I P+
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+ +I F ++A+ + M +P + T+ L+ + + G V+E++ +L+ ++
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
G+ + T+N+ ++ Y + +A + M + PD + +++ ++ D
Sbjct: 520 DSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVD 579
Query: 356 EALNLLAEM 364
E EM
Sbjct: 580 ECREQFEEM 588
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 166/347 (47%), Gaps = 46/347 (13%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIK----PSLVTMNILINCYCHLGQINSAFSVLA 117
N ++ L+ ++ + + + H++ G K PSL N L+N C + ++ A ++
Sbjct: 129 NVIIARLLYSRSPVSTLGVIHRL--IGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVF 186
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+ RG+ PD +TFTTLI G C +++ A + D++ G N ++ LI G K+
Sbjct: 187 DMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMR 246
Query: 178 ETSAALELLRRI-QGRGIKPDVVM----YNTIIDSLCKDKLVSHAFDL------------ 220
+ +L++ + + + D M + ++DS+C++ + F++
Sbjct: 247 DVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNV 306
Query: 221 ---YSEMV--------------------AKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 257
Y M+ +KG+ P +Y+A+I+G C G +A LL+
Sbjct: 307 EFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLE 366
Query: 258 EMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN 317
E P YTY +L+++L KE +A+N+L +M+++ YN + G C+++
Sbjct: 367 EGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMD 426
Query: 318 EVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ +V +M Q PD ++ N +INGLCK+ D+A+ +L +M
Sbjct: 427 NPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDM 473
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 2/222 (0%)
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGY-QPDTITFTTLIKGLCLHGKIQRAL 148
+P T+N +IN C +G+++ A VL ++ + PD +T T++ GL G+ + AL
Sbjct: 444 RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEAL 503
Query: 149 QFHDDVLAQGFLL-NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
+ V+ + + V+Y +I GL KL + A+ + +++ + D Y IID
Sbjct: 504 DVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDG 563
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
LC V A + +++ + Y+A + G C G L A L ++ P+
Sbjct: 564 LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPN 623
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
V Y ++ + G REA +L M K G PD VT+ L
Sbjct: 624 VVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 134/311 (43%), Gaps = 2/311 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P +N ++ L K A L + PS T +L+ C A +V
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L +L++ T + ++GLC+ L +L ++ + T+INGLCK
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 176 LGETSAALELLRRI-QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG-ISPNV 233
+G A+++L + G+ PD V NT++ L A D+ + ++ + I P V
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGV 519
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
V Y+A+I G + + +A+ + ++ ++ D TY I++D L KV AK
Sbjct: 520 VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDD 579
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
+I + D Y + + G C ++ A ++ G P+V YN +I + +
Sbjct: 580 VIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGL 639
Query: 354 ADEALNLLAEM 364
EA +L EM
Sbjct: 640 KREAYQILEEM 650
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 148/351 (42%), Gaps = 42/351 (11%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINS---- 111
P + F ++ + + A + +M GI+P+ +T+++LI + + + +
Sbjct: 195 PDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKL 254
Query: 112 -------------------AFSVLA-GILKRGYQPD----------------TITFTTLI 135
AF+ L + + GY D + +I
Sbjct: 255 MKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMI 314
Query: 136 KGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIK 195
LC + + A + + ++G + SY +I+GLCK G A +LL
Sbjct: 315 DSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFF 374
Query: 196 PDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGL 255
P Y +++SLCK+ A ++ M+ K + Y+ + G C++ + + +
Sbjct: 375 PSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNV 434
Query: 256 LDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNML-AVMIKQGVKPDVVTYNSLMDGYC 314
L M + PD YT +++ L K G+V +A +L +M + PD VT N++M G
Sbjct: 435 LVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLL 494
Query: 315 LVNEVNKAQDVFN-AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+A DV N M + P V +YN +I GL K+ DEA+++ ++
Sbjct: 495 AQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQL 545
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 129/300 (43%), Gaps = 50/300 (16%)
Query: 110 NSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ------ 163
+ A +L G+ RGY+PD++ +++I LC G+ A + LA GF+ ++
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 164 -------------------------------VSYGTLINGLCKLGETSAALELLRRIQGR 192
+Y L+N LC + A +L+ ++ R
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 193 GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQA 252
G PDVV + T+I C+ + + A ++ EM GI PN +T S LI GF + ++
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETG 251
Query: 253 IGLLDEMG--LKN---IDPDVYTYTILVDALGKEGKVRE----AKNMLAVMIKQGVKPDV 303
L+ E+ +KN + LVD++ +EG + A+NM + + V +
Sbjct: 252 RKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM---SLCESVNVE- 307
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
Y ++D C + A + M +G P SYN II+GLCK A LL E
Sbjct: 308 FAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE 367
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 1/186 (0%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAIS-LSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
P N V+ L+ A+ L+ M IKP +V N +I L + + A
Sbjct: 480 APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAM 539
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
SV + K D+ T+ +I GLC+ K+ A +F DDV+ + Y + GL
Sbjct: 540 SVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGL 599
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
C+ G S A L + G P+VV YNT+I + L A+ + EM G +P+
Sbjct: 600 CQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDA 659
Query: 234 VTYSAL 239
VT+ L
Sbjct: 660 VTWRIL 665
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 162 NQVSYGTLINGLCKLGET-SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
++ + I+ +C + AL +L + RG +PD + +++I SLC A
Sbjct: 53 DRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRR 112
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM-GLK-NIDPDVYTYTILVDAL 278
+ +A G P+ T + +I +G++ + G K P + Y L++ L
Sbjct: 113 FLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQL 172
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
+V +A ++ M +G PDVVT+ +L+ GYC + E+ A VF+ M G P+
Sbjct: 173 CTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNS 232
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
+ +++I G K++ + L+ E+
Sbjct: 233 LTLSVLIGGFLKMRDVETGRKLMKEL 258
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 6/283 (2%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEF-NKVLTSLVKTKHYSTAISLSHQM--EFTGIKPSLV 94
N DA S FN + P +F N VL S + + L + +P
Sbjct: 64 NLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRS 123
Query: 95 TMNILINCYCHL--GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHD 152
T IL++ C I++ VL ++ G +PD +T ++ LC G++ A
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 153 DVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGR-GIKPDVVMYNTIIDSLCKD 211
++ + + +Y L+ LCK + E + ++ +KPD+V + +ID++C
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTY 271
K + A L S++ G P+ Y+ ++ GFC + + +A+G+ +M + ++PD TY
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC 314
L+ L K G+V EA+ L M+ G +PD TY SLM+G C
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 12/295 (4%)
Query: 65 LTSLVKTKHYSTAISLSHQMEFTGIKP-SLVTMNILINCYCHLGQINSAFSVLAGILKR- 122
L + K+ + S A SL + + T P L N ++ Y + +N + ILK
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ 115
Query: 123 -GYQPDTITFTTLIKGLCLH-----GKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKL 176
++P TF L+ C + R L ++ G +QV+ + LC+
Sbjct: 116 PNFRPGRSTFLILLSHACRAPDSSISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCET 172
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK-GISPNVVT 235
G A +L++ + + PD YN ++ LCK K + ++ EM + P++V+
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++ LI C L++A+ L+ ++G PD + Y ++ K EA + M
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
++GV+PD +TYN+L+ G V +A+ M G PD +Y ++NG+C+
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 7/199 (3%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLC----LHGK 143
G++P VT +I + C G+++ A ++ + ++ PDT T+ L+K LC LH
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 144 IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
+ + DD + L VS+ LI+ +C A+ L+ ++ G KPD +YNT
Sbjct: 214 YEFVDEMRDDFDVKPDL---VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNT 270
Query: 204 IIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN 263
I+ C S A +Y +M +G+ P+ +TY+ LI+G G++++A L M
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Query: 264 IDPDVYTYTILVDALGKEG 282
+PD TYT L++ + ++G
Sbjct: 331 YEPDTATYTSLMNGMCRKG 349
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 25/265 (9%)
Query: 125 QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ----------------------GFLLN 162
P+ +L + +I L+FH+ VL F
Sbjct: 62 SPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPG 121
Query: 163 QVSYGTLINGLCKLGETSAA--LELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ ++ L++ C+ ++S + +L + G++PD V + + SLC+ V A DL
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLK-NIDPDVYTYTILVDALG 279
E+ K P+ TY+ L+ C L +DEM ++ PD+ ++TIL+D +
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVC 241
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
+REA +++ + G KPD YN++M G+C +++ ++A V+ M + G PD
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
+YN +I GL K +EA L M
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTM 326
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + F ++ ++ +K+ A+ L ++ G KP N ++ +C L + + A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ + G +PD IT+ TLI GL G+++ A + ++ G+ + +Y +L+NG+C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 176 LG 177
G
Sbjct: 348 KG 349
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 9/294 (3%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
N+++ K A + + E G P+ T + + C ++ A SV +L
Sbjct: 234 LNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKML 293
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK-LGET 179
K G + +I C GK + A ++ + L TLI LCK G
Sbjct: 294 KSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTI 353
Query: 180 SAALELLRRIQG----RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
+ A E+L + G RGIKP ++ +I SLC+ + V A L +M++KG +P
Sbjct: 354 TFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV 409
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++ +++ G L +A +L M + + PDVYTYT+++ K G + EA+ +LA
Sbjct: 410 FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAK 469
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
K+ K VTY++L+ GYC + E ++A + N M + G P+ YN +I C
Sbjct: 470 KKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 13/280 (4%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH 151
+L +N LI + LG+ +AF V + + G+ P+ T+ ++ LC + A
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL--LRRIQGRGIKPDVVMYNTIIDSLC 209
+ +L G L G +I CK G+ A + L + + + + P V T+I +LC
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALC 347
Query: 210 K-DKLVSHAF----DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNI 264
K D ++ A DL E +GI P +S +I+ C + +K A LL +M K
Sbjct: 348 KNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGP 403
Query: 265 DPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQD 324
P + ++V A K G + EAK +L +M +G+KPDV TY ++ GY +++AQ+
Sbjct: 404 APGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQE 463
Query: 325 VFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ ++ + +Y+ +I G CKI+ DEAL LL EM
Sbjct: 464 ILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEM 503
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 18/333 (5%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A F++ + TP + L +L K A S+ +M +G+ M +I
Sbjct: 250 AFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIIT 309
Query: 102 CYCHLGQINSAFSV--LAGILKRGYQPDTITFTTLIKGLCLH-GKIQRALQFHDDVLAQG 158
+C G+ A+SV LA ++ P + TLI LC + G I A + D+ +
Sbjct: 310 WFCKEGKAEEAYSVYELAKTKEKSLPPRFV--ATLITALCKNDGTITFAQEMLGDLSGEA 367
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
+ +I+ LC++ A LL + +G P ++N ++ + K + A
Sbjct: 368 RRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAK 427
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
++ M ++G+ P+V TY+ +I G+ G + +A +L E K+ TY L+
Sbjct: 428 EVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGY 487
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN-EVNKAQDVFNAMSQRGETPD 337
K + EA +L M + GV+P+ YN L+ +CL + KA+ +F M Q+G
Sbjct: 488 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKG---- 543
Query: 338 VHSYNIIINGLCKI--KMADEAL-----NLLAE 363
+H N I GL + +M EA NLLAE
Sbjct: 544 LH-LNAISQGLIRAVKEMESEAKVTEDGNLLAE 575
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 11/295 (3%)
Query: 80 LSHQMEFTGIK-------PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFT 132
L+H +F K P + N+L++ C G + ++L + R +PD TF
Sbjct: 214 LTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFN 272
Query: 133 TLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGR 192
L G C ++A++ ++++ G +Y I+ C+ G A +L + +
Sbjct: 273 VLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITK 332
Query: 193 GIK---PDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
G P + +I +L K+ F+L M++ G P+V TY +I G C+ ++
Sbjct: 333 GSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKV 392
Query: 250 KQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
+A LDEM K PD+ TY + L + K EA + M++ P V TYN L
Sbjct: 393 DEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 452
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + +++ + A + + M +R DV +Y +INGL A EA LL E+
Sbjct: 453 ISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEV 507
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 4/269 (1%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
+ +++ + P I FN +L +L K +L +M +KP T N+L +C +
Sbjct: 223 RKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRV 281
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLN---Q 163
A +L +++ G++P+ T+ I C G + A D ++ +G ++
Sbjct: 282 RDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTA 341
Query: 164 VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
++ +I L K + EL+ R+ G PDV Y +I+ +C + V A+ E
Sbjct: 342 KTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE 401
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGK 283
M KG P++VTY+ + C + +A+ L M P V TY +L+ +
Sbjct: 402 MSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDD 461
Query: 284 VREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
A N M K+ DV TY ++++G
Sbjct: 462 PDGAFNTWTEMDKRDCVQDVETYCAMING 490
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 48 RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
R ++ P FN + + + A+ L +M G KP T I+ +C G
Sbjct: 258 RRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG 317
Query: 108 QINSAFSVLAGILKRGYQ---PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
++ A + ++ +G P TF +I L + K + + +++ G L +
Sbjct: 318 MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS 377
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y +I G+C + A + L + +G PD+V YN + LC+++ A LY M
Sbjct: 378 TYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRM 437
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
V +P+V TY+ LI F + A EM ++ DV TY +++ L +
Sbjct: 438 VESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRA 497
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLM 310
+EA +L ++ +G+K ++S +
Sbjct: 498 KEACFLLEEVVNKGLKLPYRVFDSFL 523
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 6/231 (2%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIK---PSLV 94
+P A+ M++ P F + + + + A L M G P+
Sbjct: 283 DPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDV 154
T ++I + F ++ ++ G PD T+ +I+G+C+ K+ A +F D++
Sbjct: 343 TFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 402
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
+G+ + V+Y + LC+ +T AL+L R+ P V YN +I +
Sbjct: 403 SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDP 462
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM---GLK 262
AF+ ++EM + +V TY A+I G + K+A LL+E+ GLK
Sbjct: 463 DGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLK 513
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 3/273 (1%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLV--KTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
AI F M M P F ++T L K ++ A +M +G P +
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ C C +G A S L + K G+ P T+ ++ I+ LC GK++ AL +
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
LL+Q +YG++++GL + G+ AL+ + ++ G KP V +Y ++I K+K + +
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+M + P+VVTY+A+I G+ +G++++A M + PD TY+ ++ L
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLC 970
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
+ K +A +L+ M+ +G+ P + + ++ G
Sbjct: 971 QACKSEDALKLLSEMLDKGIAPSTINFRTVFYG 1003
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 156/362 (43%), Gaps = 37/362 (10%)
Query: 39 PGDAISHFNRMLQMPS-TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
P A+ FN + Q + + +N +L+ + ++ L +ME G + T
Sbjct: 169 PHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWT 228
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
ILI+ Y +I V + K G++ D + +I+ LC+ G+ AL+F+ +++ +
Sbjct: 229 ILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEK 288
Query: 158 GFLLNQVSY-----------------------------------GTLINGLCKLGETSAA 182
G +Y G L+ C G+ A
Sbjct: 289 GITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEA 348
Query: 183 LELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYG 242
LEL+R ++ + + D + ++ LC+ + A ++ M + + + V Y +I G
Sbjct: 349 LELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISG 407
Query: 243 FCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD 302
+ + +A+ + + P V TYT ++ L K + + N+ MI+ G++PD
Sbjct: 408 YLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPD 467
Query: 303 VVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLA 362
V +++ G+ N V +A VF++M ++G P SY+I + LC+ DE + +
Sbjct: 468 SVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFN 527
Query: 363 EM 364
+M
Sbjct: 528 QM 529
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 3/295 (1%)
Query: 72 KHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITF 131
K + SL ++M G + T I+I Y G N A + G P + TF
Sbjct: 692 KDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTF 751
Query: 132 TTLIKGLC-LHGK-IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRI 189
LI LC G+ ++ A + +++ GF+ ++ + LC++G T A L +
Sbjct: 752 KCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSL 811
Query: 190 QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
G P V Y+ I +LC+ + A + + + TY ++++G G L
Sbjct: 812 GKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDL 870
Query: 250 KQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
++A+ ++ M P V+ YT L+ KE ++ + M + +P VVTY ++
Sbjct: 871 QKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAM 930
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ GY + +V +A + F M +RG +PD +Y+ IN LC+ +++AL LL+EM
Sbjct: 931 ICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM 985
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 3/274 (1%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLG--QINSAFSVLAGILKRGYQPDTITFTTL 134
AI +M+ G+ PS T LI C + A +++ G+ PD
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 135 IKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGI 194
+ LC G + A D + GF + V+Y I LC++G+ AL L +G
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGFPVT-VAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 195 KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIG 254
D Y +I+ L + + A D + M G P V Y++LI F QL++ +
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 255 LLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC 314
+M ++ +P V TYT ++ GKV EA N M ++G PD TY+ ++ C
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLC 970
Query: 315 LVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+ A + + M +G P ++ + GL
Sbjct: 971 QACKSEDALKLLSEMLDKGIAPSTINFRTVFYGL 1004
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ N M ++ + P + + ++ K K + +ME +PS+VT +I
Sbjct: 873 ALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMIC 932
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y LG++ A++ + +RG PD T++ I LC K + AL+ ++L +G
Sbjct: 933 GYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
Query: 162 NQVSYGTLINGLCKLGETSAA 182
+ +++ T+ GL + G+ A
Sbjct: 993 STINFRTVFYGLNREGKHDLA 1013
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 106/272 (38%), Gaps = 39/272 (14%)
Query: 40 GD-AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
GD A+ + M++ T + + +L + K++ S++ M
Sbjct: 275 GDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY 334
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
L+ +C G+I A ++ + + D F L+KGLC ++ AL+ D ++ +
Sbjct: 335 LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVD-IMKRR 393
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDK------ 212
L + YG +I+G + + S ALE I+ G P V Y I+ L K K
Sbjct: 394 KLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGC 453
Query: 213 -----------------------------LVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
V+ A+ ++S M KGI P +YS +
Sbjct: 454 NLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKEL 513
Query: 244 CIVGQLKQAIGLLDEMGLKN--IDPDVYTYTI 273
C + + I + ++M I D++++ I
Sbjct: 514 CRSSRYDEIIKIFNQMHASKIVIRDDIFSWVI 545
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 155/320 (48%), Gaps = 4/320 (1%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F+R+ + N +L +L K K A + Q++ + I P+ T NI I
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFI 231
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +C ++ A + + G++P I++TT+I+ C + + + ++ A G
Sbjct: 232 HGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSP 291
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N ++Y T+++ L E AL + R++ G KPD + YN +I +L + + A +
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Query: 221 YS-EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNI-DPDVYTYTILVDAL 278
+ EM G+S N TY+++I +C + +AI LL EM N+ +PDV+TY L+ +
Sbjct: 352 FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 279 GKEGKVREAKNMLAVMI-KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
K G V E +L M+ K + D TY L+ C N A +F M + TP
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471
Query: 338 VHSYNIIINGLCKIKMADEA 357
+ +++ + K M + A
Sbjct: 472 HRTCLLLLEEVKKKNMHESA 491
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 131/281 (46%), Gaps = 14/281 (4%)
Query: 93 LVTMNI---LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA-- 147
LVT+N ++ + G+ A + + + G + +T + L+ LC ++++A
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 148 --LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
LQ + N ++ I+G CK AL ++ ++G G +P V+ Y TII
Sbjct: 212 VLLQLKSHITP-----NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTII 266
Query: 206 DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
C+ +++ SEM A G PN +TY+ ++ + ++A+ + M
Sbjct: 267 RCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAV-MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQD 324
PD Y L+ L + G++ EA+ + V M + GV + TYNS++ YC +E +KA +
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIE 386
Query: 325 VFNAM-SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ M S PDVH+Y ++ K E LL EM
Sbjct: 387 LLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 40/286 (13%)
Query: 49 MLQMPS--TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
+LQ+ S TP FN + K A+ +M+ G +P +++ +I CYC
Sbjct: 213 LLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ----------------- 149
+ + +L+ + G P++IT+TT++ L + + AL+
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 150 -------------------FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQ 190
F ++ G +N +Y ++I C E A+ELL+ ++
Sbjct: 333 NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 191 GRGI-KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG-ISPNVVTYSALIYGFCIVGQ 248
+ PDV Y ++ S K V L EMV K +S + TY+ LI C
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANM 452
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
+ A L +EM ++I P T +L++ + K+ A+ + +M
Sbjct: 453 CEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 155/320 (48%), Gaps = 4/320 (1%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F+R+ + N +L +L K K A + Q++ + I P+ T NI I
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFI 231
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +C ++ A + + G++P I++TT+I+ C + + + ++ A G
Sbjct: 232 HGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSP 291
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N ++Y T+++ L E AL + R++ G KPD + YN +I +L + + A +
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Query: 221 YS-EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNI-DPDVYTYTILVDAL 278
+ EM G+S N TY+++I +C + +AI LL EM N+ +PDV+TY L+ +
Sbjct: 352 FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 279 GKEGKVREAKNMLAVMI-KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
K G V E +L M+ K + D TY L+ C N A +F M + TP
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471
Query: 338 VHSYNIIINGLCKIKMADEA 357
+ +++ + K M + A
Sbjct: 472 HRTCLLLLEEVKKKNMHESA 491
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 131/281 (46%), Gaps = 14/281 (4%)
Query: 93 LVTMNI---LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA-- 147
LVT+N ++ + G+ A + + + G + +T + L+ LC ++++A
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 148 --LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
LQ + N ++ I+G CK AL ++ ++G G +P V+ Y TII
Sbjct: 212 VLLQLKSHITP-----NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTII 266
Query: 206 DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
C+ +++ SEM A G PN +TY+ ++ + ++A+ + M
Sbjct: 267 RCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAV-MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQD 324
PD Y L+ L + G++ EA+ + V M + GV + TYNS++ YC +E +KA +
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIE 386
Query: 325 VFNAM-SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ M S PDVH+Y ++ K E LL EM
Sbjct: 387 LLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 40/286 (13%)
Query: 49 MLQMPS--TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
+LQ+ S TP FN + K A+ +M+ G +P +++ +I CYC
Sbjct: 213 LLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ----------------- 149
+ + +L+ + G P++IT+TT++ L + + AL+
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 150 -------------------FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQ 190
F ++ G +N +Y ++I C E A+ELL+ ++
Sbjct: 333 NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 191 GRGI-KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG-ISPNVVTYSALIYGFCIVGQ 248
+ PDV Y ++ S K V L EMV K +S + TY+ LI C
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANM 452
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
+ A L +EM ++I P T +L++ + K+ A+ + +M
Sbjct: 453 CEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 146/302 (48%), Gaps = 6/302 (1%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI-NCYCHLGQINSAFSVLAGIL 120
N +L+ LVK + I L QM+ G+KP +VT N L+ C A ++ +
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G Q D++ + T++ +G+ + A F + +G N Y +L+N G+
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A EL+ ++ G+ P+ VM T++ K L + +L SE+ + G + N + Y L+
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G G+L++A + D+M K + D Y +I++ AL + + +EAK + K
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
D+V N+++ YC E+ + M ++ +PD ++++I+I K E L+L
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK-----EKLHL 464
Query: 361 LA 362
LA
Sbjct: 465 LA 466
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
++ A + I + + +++ L +GK+ ++ D + G + V+Y T
Sbjct: 147 VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNT 206
Query: 169 LINGLCKLGE-TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
L+ G K+ A+EL+ + GI+ D VMY T++ + A + +M +
Sbjct: 207 LLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVE 266
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G SPN+ YS+L+ + G K+A L+ EM + P+ T L+ K G +
Sbjct: 267 GHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRS 326
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
+ +L+ + G + + Y LMDG ++ +A+ +F+ M +G D ++ +I+I+
Sbjct: 327 RELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISA 386
Query: 348 LCKIKMADEALNL 360
LC+ K EA L
Sbjct: 387 LCRSKRFKEAKEL 399
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
+P I+ ++ +L S Y A L +M+ G+ P+ V M L+ Y G + +
Sbjct: 269 SPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRE 328
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+L+ + GY + + + L+ GL GK++ A DD+ +G + + +I+ LC
Sbjct: 329 LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALC 388
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
+ A EL R + K D+VM NT++ + C+ + + +M + +SP+
Sbjct: 389 RSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYN 448
Query: 235 TYSALIYGF 243
T+ LI F
Sbjct: 449 TFHILIKYF 457
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 10/285 (3%)
Query: 87 TGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQR 146
+ +P ++ N+LI+ Y Q A S+ +L+ Y P T+ LIK C+ G I+R
Sbjct: 171 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 230
Query: 147 A------LQFHDDVLAQGFLLNQVSYGTLINGLCKL-GETSAALELLRRIQGRGIKPDVV 199
A +Q H + Y I GL K G T A+++ +R++ KP
Sbjct: 231 AEVVLVEMQNHH---VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
YN +I+ K ++ LY EM + PN+ TY+AL+ F G ++A + +++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
++PDVY Y L+++ + G A + ++M G +PD +YN ++D Y
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 320 NKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ A+ VF M + G P + S+ ++++ K + + ++ EM
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 452
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 143/313 (45%), Gaps = 1/313 (0%)
Query: 53 PSTPPIFEFNKVLTSLVKTK-HYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINS 111
P T + +N + L+K K + AI + +M+ KP+ T N++IN Y +
Sbjct: 245 PKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYM 304
Query: 112 AFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLIN 171
++ + + +P+ T+T L+ G ++A + + + G + Y L+
Sbjct: 305 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 364
Query: 172 GLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP 231
+ G A E+ +Q G +PD YN ++D+ + L S A ++ EM GI+P
Sbjct: 365 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 424
Query: 232 NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNML 291
+ ++ L+ + + + ++ EM ++PD + +++ G+ G+ + + +L
Sbjct: 425 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 484
Query: 292 AVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
A M D+ TYN L++ Y + + +++F + ++ PDV ++ I +
Sbjct: 485 AEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK 544
Query: 352 KMADEALNLLAEM 364
K+ + L + EM
Sbjct: 545 KLYVKCLEVFEEM 557
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 107/251 (42%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F ++ + P ++ +N ++ S + + A + M+ G +P + NI+++ Y
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G + A +V + + G P + L+ + + ++ G +
Sbjct: 404 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 463
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+++N +LG+ + ++L ++ D+ YN +I+ K + +L+ E+
Sbjct: 464 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 523
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
K P+VVT+++ I + + + + +EM PD T +L+ A E +V
Sbjct: 524 EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVE 583
Query: 286 EAKNMLAVMIK 296
+ ++L M K
Sbjct: 584 QVTSVLRTMHK 594
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 10/285 (3%)
Query: 87 TGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQR 146
+ +P ++ N+LI+ Y Q A S+ +L+ Y P T+ LIK C+ G I+R
Sbjct: 149 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 208
Query: 147 A------LQFHDDVLAQGFLLNQVSYGTLINGLCKL-GETSAALELLRRIQGRGIKPDVV 199
A +Q H + Y I GL K G T A+++ +R++ KP
Sbjct: 209 AEVVLVEMQNHH---VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
YN +I+ K ++ LY EM + PN+ TY+AL+ F G ++A + +++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
++PDVY Y L+++ + G A + ++M G +PD +YN ++D Y
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 320 NKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ A+ VF M + G P + S+ ++++ K + + ++ EM
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 143/313 (45%), Gaps = 1/313 (0%)
Query: 53 PSTPPIFEFNKVLTSLVKTK-HYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINS 111
P T + +N + L+K K + AI + +M+ KP+ T N++IN Y +
Sbjct: 223 PKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYM 282
Query: 112 AFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLIN 171
++ + + +P+ T+T L+ G ++A + + + G + Y L+
Sbjct: 283 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 342
Query: 172 GLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP 231
+ G A E+ +Q G +PD YN ++D+ + L S A ++ EM GI+P
Sbjct: 343 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 402
Query: 232 NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNML 291
+ ++ L+ + + + ++ EM ++PD + +++ G+ G+ + + +L
Sbjct: 403 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 462
Query: 292 AVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
A M D+ TYN L++ Y + + +++F + ++ PDV ++ I +
Sbjct: 463 AEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK 522
Query: 352 KMADEALNLLAEM 364
K+ + L + EM
Sbjct: 523 KLYVKCLEVFEEM 535
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 107/251 (42%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F ++ + P ++ +N ++ S + + A + M+ G +P + NI+++ Y
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G + A +V + + G P + L+ + + ++ G +
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 441
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+++N +LG+ + ++L ++ D+ YN +I+ K + +L+ E+
Sbjct: 442 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 501
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
K P+VVT+++ I + + + + +EM PD T +L+ A E +V
Sbjct: 502 EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVE 561
Query: 286 EAKNMLAVMIK 296
+ ++L M K
Sbjct: 562 QVTSVLRTMHK 572
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 138/284 (48%), Gaps = 1/284 (0%)
Query: 82 HQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLH 141
+M G+K S L+ +C G A + + K+G + +TI + TL+
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 142 GKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMY 201
I+ ++ +G + +Y L++ + + LLR ++ G++P+V Y
Sbjct: 393 NHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSY 452
Query: 202 NTIIDSLCKDKLVSH-AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
+I + + K +S A D + M G+ P+ +Y+ALI+ + + G ++A +EM
Sbjct: 453 TCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN 320
+ I P V TYT ++DA + G + + +M+++ +K +TYN+L+DG+
Sbjct: 513 KEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYI 572
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+A+DV + S+ G P V +YN+++N + + LL EM
Sbjct: 573 EARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM 616
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 129/286 (45%), Gaps = 7/286 (2%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N ++ + K+ H L +M G+KPS T NIL++ Y Q + ++L +
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ----GFLLNQVSYGTLINGLCKL 176
G +P+ ++T LI +G+ ++ D + G + SY LI+
Sbjct: 442 DLGLEPNVKSYTCLISA---YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTY 236
G A + GIKP V Y +++D+ + +++ M+ + I +TY
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITY 558
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
+ L+ GF G +A ++ E + P V TY +L++A + G+ + +L M
Sbjct: 559 NTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAA 618
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN 342
+KPD +TY++++ + V + +A M + G+ PD SY
Sbjct: 619 LNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYE 664
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 1/265 (0%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M P +N ++ + + +L +ME G++P++ + LI+ Y
Sbjct: 402 FTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGR 461
Query: 106 LGQINS-AFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
+++ A + K G +P + ++T LI + G ++A +++ +G +
Sbjct: 462 TKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVE 521
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y ++++ + G+T +E+ + + IK + YNT++D K L A D+ SE
Sbjct: 522 TYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEF 581
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
G+ P+V+TY+ L+ + GQ + LL EM N+ PD TY+ ++ A +
Sbjct: 582 SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDF 641
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSL 309
+ A +M+K G PD +Y L
Sbjct: 642 KRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 85/198 (42%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A F RM ++ P + ++ + + + A + +M GIKPS+ T +++
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLD 528
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ G + +L+ + IT+ TL+ G G A + G
Sbjct: 529 AFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ ++Y L+N + G+ + +LL+ + +KPD + Y+T+I + + + AF +
Sbjct: 589 SVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYH 648
Query: 222 SEMVAKGISPNVVTYSAL 239
MV G P+ +Y L
Sbjct: 649 KMMVKSGQVPDPRSYEKL 666
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 3/306 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ-INSAFSVLAGI 119
+ +L + +T Y AI L +M+ G P+LVT N++++ + +G+ VL +
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
+G + D T +T++ G ++ A +F ++ + G+ V+Y L+ K G
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
+ AL +L+ ++ D V YN ++ + + A + M KG+ PN +TY+ +
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 392
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I + G+ +A+ L M P+ TY ++ LGK+ + E ML M G
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 300 KPDVVTYNSLMDGYCLVNEVNK-AQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
P+ T+N+++ C ++K VF M G PD ++N +I+ + +A
Sbjct: 453 SPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511
Query: 359 NLLAEM 364
+ EM
Sbjct: 512 KMYGEM 517
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 156/309 (50%), Gaps = 9/309 (2%)
Query: 65 LTSLVK----TKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
L SLVK + H+ A+ L + + +L + +I + + S +SV A +L
Sbjct: 139 LVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLL 198
Query: 121 KR----GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKL 176
+ Y D +TT++ GK ++A+ + + G V+Y +++ K+
Sbjct: 199 DKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM 258
Query: 177 GETSAA-LELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G + L +L ++ +G+K D +T++ + ++ L+ A + ++E+ + G P VT
Sbjct: 259 GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+AL+ F G +A+ +L EM + D TY LV A + G +EA ++ +M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
K+GV P+ +TY +++D Y + ++A +F +M + G P+ +YN +++ L K ++
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 356 EALNLLAEM 364
E + +L +M
Sbjct: 439 EMIKMLCDM 447
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 157/326 (48%), Gaps = 14/326 (4%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M P FN ++++ + A + +M G + T N L+N
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHG------KIQRALQFHDDVLAQGF 159
G S +V++ + +G++P +++ +++ G +I+ ++ +
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK-EGQIFPSWM 597
Query: 160 LLNQVSYGTLINGLCK-LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
LL + L N C+ L + A L ++ G KPD+V++N+++ ++ + A
Sbjct: 598 LLRTL---LLANFKCRALAGSERAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAE 651
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+ + G+SP++VTY++L+ + G+ +A +L + + PD+ +Y ++
Sbjct: 652 GILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF 711
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
+ G ++EA ML+ M ++G++P + TYN+ + GY + + +DV M++ P+
Sbjct: 712 CRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNE 771
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
++ ++++G C+ EA++ ++++
Sbjct: 772 LTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 141/324 (43%), Gaps = 1/324 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKT-KHYSTAISLSHQMEFTGIKPSLVTMNILI 100
AI F RM +M +P + +N +L K + + + + +M G+K T + ++
Sbjct: 229 AIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL 288
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ G + A A + GY+P T+T+ L++ G AL ++
Sbjct: 289 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ V+Y L+ + G + A ++ + +G+ P+ + Y T+ID+ K A L
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ M G PN TY+A++ + + I +L +M P+ T+ ++ G
Sbjct: 409 FYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGN 468
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+G + + M G +PD T+N+L+ Y A ++ M++ G V +
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 528
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
YN ++N L + N++++M
Sbjct: 529 YNALLNALARKGDWRSGENVISDM 552
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 159/429 (37%), Gaps = 105/429 (24%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A F + P +N +L K Y+ A+S+ +ME VT N L+
Sbjct: 299 EAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELV 358
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
Y G A V+ + K+G P+ IT+TT+I GK AL+ + G +
Sbjct: 359 AAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418
Query: 161 LNQVSYGTLINGLCKLGETSAALELL---------------------------------- 186
N +Y +++ L K ++ +++L
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRV 478
Query: 187 -RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
R ++ G +PD +NT+I + + A +Y EM G + V TY+AL+
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK----------EGKVREAKNMLAVMI 295
G + ++ +M K P +Y++++ K E +++E + + M+
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 598
Query: 296 -------------------------KQGVKP----------------------------- 301
K G KP
Sbjct: 599 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 302 ------DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
D+VTYNSLMD Y E KA+++ + + PD+ SYN +I G C+ +
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 356 EALNLLAEM 364
EA+ +L+EM
Sbjct: 719 EAVRMLSEM 727
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 158/368 (42%), Gaps = 44/368 (11%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEF-TGIKPSLVTMNIL 99
DAIS F + + F+ +L +VK A + + + + + +N+L
Sbjct: 99 DAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLL 158
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF----HDDVL 155
+ C + + + A V + +G PD ++ L+KG CL GK++ A +
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTI----------- 204
+G + V Y L++ LC GE A+E+L +I +G+K Y+ I
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 205 IDSL--------------CKDKLVSHAFDLYSE------------MVAKGISPNVVTYSA 238
I+ + C D + A DL+ E M +KG P Y A
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 239 LIYGFCIVGQLKQAIGLLD-EMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
+ C G+LK+A+ +++ EM + P V Y +L+ L +GK EA L M KQ
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ 398
Query: 298 -GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADE 356
+ TY +L+DG C + +A V M + P V +Y+++I GLC + E
Sbjct: 399 VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE 458
Query: 357 ALNLLAEM 364
A+ L EM
Sbjct: 459 AVMWLEEM 466
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 127/278 (45%), Gaps = 10/278 (3%)
Query: 79 SLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGL 138
S+ ++ G +V IL++ C G+++ A +L IL++G + + + G
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG- 270
Query: 139 CLHGK-----IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
H + I+R + + L +G + SY + L + G+ E+L ++ +G
Sbjct: 271 --HWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKG 328
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYS-EMVAKGISPNVVTYSALIYGFCIVGQLKQA 252
+P +Y + +LC+ + A + + EM+ P V Y+ LI G C G+ +A
Sbjct: 329 FEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Query: 253 IGLLDEMGLK-NIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMD 311
+G L +M + + + TY LVD L ++G+ EA ++ M+ + P V TY+ ++
Sbjct: 389 VGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIK 448
Query: 312 GYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
G C ++ +A M + P+ + + +C
Sbjct: 449 GLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 1/166 (0%)
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+Y T+ID L K V + M ++++I F G+L+ AI L +
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNML-AVMIKQGVKPDVVTYNSLMDGYCLVNE 318
N ++ L+ + KE ++ A ++ V + N LM C VN
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNR 167
Query: 319 VNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ A VF M+ +G PD SY I++ G C +EA +LL M
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSM 213
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 158/368 (42%), Gaps = 44/368 (11%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEF-TGIKPSLVTMNIL 99
DAIS F + + F+ +L +VK A + + + + + +N+L
Sbjct: 99 DAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLL 158
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF----HDDVL 155
+ C + + + A V + +G PD ++ L+KG CL GK++ A +
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTI----------- 204
+G + V Y L++ LC GE A+E+L +I +G+K Y+ I
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 205 IDSL--------------CKDKLVSHAFDLYSE------------MVAKGISPNVVTYSA 238
I+ + C D + A DL+ E M +KG P Y A
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 239 LIYGFCIVGQLKQAIGLLD-EMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
+ C G+LK+A+ +++ EM + P V Y +L+ L +GK EA L M KQ
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ 398
Query: 298 -GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADE 356
+ TY +L+DG C + +A V M + P V +Y+++I GLC + E
Sbjct: 399 VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE 458
Query: 357 ALNLLAEM 364
A+ L EM
Sbjct: 459 AVMWLEEM 466
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 127/278 (45%), Gaps = 10/278 (3%)
Query: 79 SLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGL 138
S+ ++ G +V IL++ C G+++ A +L IL++G + + + G
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG- 270
Query: 139 CLHGK-----IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
H + I+R + + L +G + SY + L + G+ E+L ++ +G
Sbjct: 271 --HWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKG 328
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYS-EMVAKGISPNVVTYSALIYGFCIVGQLKQA 252
+P +Y + +LC+ + A + + EM+ P V Y+ LI G C G+ +A
Sbjct: 329 FEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Query: 253 IGLLDEMGLK-NIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMD 311
+G L +M + + + TY LVD L ++G+ EA ++ M+ + P V TY+ ++
Sbjct: 389 VGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIK 448
Query: 312 GYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
G C ++ +A M + P+ + + +C
Sbjct: 449 GLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 1/166 (0%)
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+Y T+ID L K V + M ++++I F G+L+ AI L +
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNML-AVMIKQGVKPDVVTYNSLMDGYCLVNE 318
N ++ L+ + KE ++ A ++ V + N LM C VN
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNR 167
Query: 319 VNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ A VF M+ +G PD SY I++ G C +EA +LL M
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSM 213
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 154/346 (44%), Gaps = 39/346 (11%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
GD M P +N +L +L K A SL +M+ +P+ VT NIL
Sbjct: 199 GDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNIL 254
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I+ YC+ ++ + +L G+ PD +T T +++ LC G++ AL+ + V ++G
Sbjct: 255 ISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG 314
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
++ V+ TL+ G C LG+ A ++ +G P+V YN +I C ++ A D
Sbjct: 315 KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN------IDP------- 266
+++M I N T++ LI G I G+ + +L+ M + IDP
Sbjct: 375 TFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYG 434
Query: 267 --------DVYTYTILVD--------------ALGKEGKVREAKNMLAVMIKQGVKPDVV 304
D + + ++ +L ++G + + K MI +G P ++
Sbjct: 435 FYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSII 494
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
+ L+ Y ++ ++ ++ N M RG P ++N +I G CK
Sbjct: 495 VSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCK 540
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 136/311 (43%), Gaps = 32/311 (10%)
Query: 86 FTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKR-GYQPDTITFTTLIKGLCLHGKI 144
F G S T L + C + ++ + +L + G PD F T+I+G I
Sbjct: 69 FPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLI 128
Query: 145 QRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTI 204
+R + D V G + + ++++ L K A R++ GI DV Y +
Sbjct: 129 KRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGIL 188
Query: 205 IDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN- 263
+ L + F L M G++PN V Y+ L++ C G++ +A L+ EM N
Sbjct: 189 MKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPND 248
Query: 264 ------------------------------IDPDVYTYTILVDALGKEGKVREAKNMLAV 293
PDV T T +++ L EG+V EA +L
Sbjct: 249 VTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLER 308
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
+ +G K DVV N+L+ GYC + ++ AQ F M ++G P+V +YN++I G C + M
Sbjct: 309 VESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGM 368
Query: 354 ADEALNLLAEM 364
D AL+ +M
Sbjct: 369 LDSALDTFNDM 379
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 8/312 (2%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + FN +L LVK + +M +GI + T IL+ +I F +
Sbjct: 145 PSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKL 204
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L + G P+ + + TL+ LC +GK+ RA ++ N V++ LI+ C
Sbjct: 205 LQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP----NDVTFNILISAYCN 260
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
+ ++ LL + G PDVV +++ LC + VS A ++ + +KG +VV
Sbjct: 261 EQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVA 320
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
+ L+ G+C +G+++ A EM K P+V TY +L+ G + A + M
Sbjct: 321 CNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK 380
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET---PDVHSYNIIINGLCKIK 352
++ + T+N+L+ G + + + M Q +T + YN +I G K
Sbjct: 381 TDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM-QDSDTVHGARIDPYNCVIYGFYKEN 439
Query: 353 MADEALNLLAEM 364
++AL L +M
Sbjct: 440 RWEDALEFLLKM 451
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 144/322 (44%), Gaps = 35/322 (10%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + KV+ L S A+ + ++E G K +V N L+ YC LG++ A
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ ++GY P+ T+ LI G C G + AL +D+ N ++ TLI GL
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 176 LGETSAALELLRRIQ------GRGIKP-DVVMYNTIIDSLCKDKL-------------VS 215
G T L++L +Q G I P + V+Y ++ +D L V
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVD 460
Query: 216 HAFDL---------------YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
+F L Y +M+ +G P+++ LI+ + G++++++ L+++M
Sbjct: 461 RSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN 320
+ P T+ ++ K+ KV + M ++G PD +YN L++ C+ ++
Sbjct: 521 TRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQ 580
Query: 321 KAQDVFNAMSQRGETPDVHSYN 342
KA +F+ M ++ PD ++
Sbjct: 581 KAWLLFSRMVEKSIVPDPSMWS 602
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 121/270 (44%), Gaps = 41/270 (15%)
Query: 83 QMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHG 142
+ME G P++ T N+LI YC +G ++SA + + + TF TLI+GL + G
Sbjct: 343 EMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGG 402
Query: 143 KIQRALQ----FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQ-------- 190
+ L+ D G ++ Y +I G K ALE L +++
Sbjct: 403 RTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVD 460
Query: 191 -------------------------GRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
G G P +++ + +I + + + +L ++MV
Sbjct: 461 RSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
+G P T++A+I GFC ++ I +++M + PD +Y L++ L +G ++
Sbjct: 521 TRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQ 580
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCL 315
+A + + M+++ + PD ++SLM +CL
Sbjct: 581 KAWLLFSRMVEKSIVPDPSMWSSLM--FCL 608
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 4/185 (2%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N V+ K + A+ +ME + P V + + C G ++ + ++
Sbjct: 428 YNCVIYGFYKENRWEDALEFLLKME--KLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMI 485
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G P I LI HGKI+ +L+ +D++ +G+L ++ +I G CK +
Sbjct: 486 GEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVM 545
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
++ + + RG PD YN +++ LC + A+ L+S MV K I P+ +S+L+
Sbjct: 546 NGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Query: 241 YGFCI 245
FC+
Sbjct: 606 --FCL 608
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 73/159 (45%)
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
P + + + LC G + +D ++ +G + + + LI+ + G+ +LEL
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLEL 515
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
+ + RG P +N +I CK V + +M +G P+ +Y+ L+ C+
Sbjct: 516 INDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCV 575
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
G +++A L M K+I PD ++ L+ L ++ +
Sbjct: 576 KGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAI 614
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 132/274 (48%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF 150
PS+ N+++ Q + A + + +R PD T++TLI G AL +
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
+ + V Y LI +L + S A+ + R++ GI PD+V YN++I+ K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
KL A L EM G+ PN V+YS L+ + + +A+ + EM N D+ T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
I++D G+ V+EA + + K ++P+VV+YN+++ Y +A +F M
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 331 QRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ +V +YN +I K ++A NL+ EM
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEM 426
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 4/284 (1%)
Query: 74 YSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTT 133
YS AIS+ +++ +GI P LV N +IN Y A ++ + + G P+T++++T
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 134 LIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
L+ + K AL ++ L+ + +I+ +L A L ++
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
I+P+VV YNTI+ + +L A L+ M K I NVVTY+ +I + + ++A
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 254 GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY 313
L+ EM + I+P+ TY+ ++ GK GK+ A + + GV+ D V Y +++ Y
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 314 CLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
V + A+ + + + + PD I L K +EA
Sbjct: 481 ERVGLMGHAKRLLHEL----KLPDNIPRETAITILAKAGRTEEA 520
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 154/327 (47%), Gaps = 8/327 (2%)
Query: 43 ISH--FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
I+H F+ M Q P + ++ ++TS K + +A+S +ME + LV + LI
Sbjct: 173 IAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLI 232
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK---IQRALQFHDDVLAQ 157
L + A S+ + + + G PD + + ++I ++GK + A ++
Sbjct: 233 ELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN---VYGKAKLFREARLLIKEMNEA 289
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G L N VSY TL++ + + AL + ++ D+ N +ID + +V A
Sbjct: 290 GVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEA 349
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L+ + I PNVV+Y+ ++ + +AI L M K+I+ +V TY ++
Sbjct: 350 DRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 409
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
GK + +A N++ M +G++P+ +TY++++ + ++++A +F + G D
Sbjct: 410 YGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEID 469
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
Y +I ++ + A LL E+
Sbjct: 470 QVLYQTMIVAYERVGLMGHAKRLLHEL 496
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 140/312 (44%), Gaps = 10/312 (3%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P ++ +L+ V+ + A+S+ +M+ L T NI+I+ Y L + A +
Sbjct: 293 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQ---RALQFHDDVLAQGFLLNQVSYGTLING 172
+ K +P+ +++ T+++ ++G+ + A+ + + N V+Y T+I
Sbjct: 353 FWSLRKMDIEPNVVSYNTILR---VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 409
Query: 173 LCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPN 232
K E A L++ +Q RGI+P+ + Y+TII K + A L+ ++ + G+ +
Sbjct: 410 YGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEID 469
Query: 233 VVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLA 292
V Y +I + VG + A LL E+ L PD + L K G+ EA +
Sbjct: 470 QVLYQTMIVAYERVGLMGHAKRLLHELKL----PDNIPRETAITILAKAGRTEEATWVFR 525
Query: 293 VMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIK 352
+ G D+ + +++ Y +VF M G PD + +++N K +
Sbjct: 526 QAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQR 585
Query: 353 MADEALNLLAEM 364
++A + EM
Sbjct: 586 EFEKADTVYREM 597
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 75/135 (55%)
Query: 230 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKN 289
+P+V Y+ ++ Q A GL DEM + + PD YTY+ L+ + GKEG A +
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 290 MLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
L M + V D+V Y++L++ + + +KA +F+ + + G TPD+ +YN +IN
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 350 KIKMADEALNLLAEM 364
K K+ EA L+ EM
Sbjct: 272 KAKLFREARLLIKEM 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 133/297 (44%), Gaps = 11/297 (3%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F + +M P + +N +L + + + AI L M+ I+ ++VT N +I Y
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
+ A +++ + RG +P+ IT++T+I GK+ RA + + G ++QV
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 472
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y T+I ++G A LL ++ PD + T I L K A ++ +
Sbjct: 473 YQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAF 528
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
G ++ + +I + + I + ++M PD ++++A GK+ +
Sbjct: 529 ESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFE 588
Query: 286 EAKNMLAVMIKQG-VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET-PDVHS 340
+A + M ++G V PD V + ++ Y + + +F QR E+ P+V+S
Sbjct: 589 KADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLF----QRLESDPNVNS 640
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 8/322 (2%)
Query: 47 NRML-QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
NRM+ S P F V V AI +++ ++ N L++ C
Sbjct: 105 NRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCE 163
Query: 106 LGQINSAFSVLAG--ILKRGYQ-PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLN 162
+ A + G ++ G+ +T +++G G + ++ + +G +
Sbjct: 164 HKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKD 223
Query: 163 QVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYS 222
SY ++ +CK G+ A++L + ++ R +K DVV YNT+I ++ + V ++
Sbjct: 224 LFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFR 283
Query: 223 EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
EM +G PNV T++ +I C G+++ A +LDEM + PD TY L L K
Sbjct: 284 EMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS 343
Query: 283 KVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN 342
++ ++ MI+ GV+P + TY LM + + V+ M + G+TPD +YN
Sbjct: 344 EI---LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYN 400
Query: 343 IIINGLCKIKMADEALNLLAEM 364
+I+ L + M D A EM
Sbjct: 401 AVIDALIQKGMLDMAREYEEEM 422
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
N+++ + LG + G D +++ + +C GK +A++ + ++ +
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+ L+ V+Y T+I + + + R ++ RG +P+V +NTII LC+D +
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A+ + EM +G P+ +TY L F + + + + L M + P + TY +L+
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMR 369
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
+ G ++ + M + G PD YN+++D ++ A++ M +RG +P
Sbjct: 370 KFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 3/240 (1%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
N +L K + +M+ G+ L + +I ++ C G+ A + +
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
R + D + + T+I+ + ++ ++ ++ +G N ++ T+I LC+ G
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
A +L + RG +PD + Y + L K S L+ M+ G+ P + TY L+
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCLFSRLEKP---SEILSLFGRMIRSGVRPKMDTYVMLMR 369
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP 301
F G L+ + + M PD Y ++DAL ++G + A+ MI++G+ P
Sbjct: 370 KFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P A+ + M + +N V+ ++ ++ I + +M G +P++ T N
Sbjct: 240 PWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNT 299
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA---LQFHDDVL 155
+I C G++ A+ +L + KRG QPD+IT+ +CL ++++ L ++
Sbjct: 300 IIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMI 353
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
G +Y L+ + G L + + ++ G PD YN +ID+L + ++
Sbjct: 354 RSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLD 413
Query: 216 HAFDLYSEMVAKGISPN 232
A + EM+ +G+SP
Sbjct: 414 MAREYEEEMIERGLSPR 430
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 129/254 (50%), Gaps = 11/254 (4%)
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQ------RALQFHDDVLAQGFLLNQVSYGTLING 172
+L + + PD+ +TTL+KG +G++ A++ DD + ++V+Y T+++
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHP---DEVTYTTVVSA 461
Query: 173 LCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK-GISP 231
G A ++L + G+ + + YN ++ CK + A DL EM GI P
Sbjct: 462 FVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEP 521
Query: 232 NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNML 291
+VV+Y+ +I G ++ A+ +EM + I P +YT L+ A G+ + A +
Sbjct: 522 DVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVF 581
Query: 292 AVMIKQG-VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
M+ VK D++ +N L++GYC + + AQ V + M + G P+V +Y + NG+ +
Sbjct: 582 DEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ 641
Query: 351 IKMADEALNLLAEM 364
+ +AL L E+
Sbjct: 642 ARKPGDALLLWKEI 655
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 33/281 (11%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF 150
P VT +++ + + G ++ A VLA + + G + IT+ L+KG C +I RA
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRA--- 506
Query: 151 HDDVLAQ-----GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
+D+L + G + VSY +I+G + +++ AL ++ RGI P + Y T++
Sbjct: 507 -EDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
Query: 206 DSLC---KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLK 262
+ + KL + FD M + +++ ++ L+ G+C +G ++ A ++ M
Sbjct: 566 KAFAMSGQPKLANRVFD--EMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKEN 623
Query: 263 NIDPDVYTYTILVDALGKEGK-------VREAKNMLAVMIKQG------------VKPDV 303
P+V TY L + + + K +E K AV K+ +KPD
Sbjct: 624 GFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDE 683
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
++L D KA ++ M + G P+ Y I
Sbjct: 684 GLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 116/277 (41%), Gaps = 21/277 (7%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
S P + V+++ V A + +M G+ + +T N+L+ YC QI+ A
Sbjct: 448 SHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAE 507
Query: 114 SVLAGILK-RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLING 172
+L + + G +PD +++ +I G L AL F +++ +G ++SY TL+
Sbjct: 508 DLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKA 567
Query: 173 LCKLGETSAALELLRRIQGRG-IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP 231
G+ A + + +K D++ +N +++ C+ L+ A + S M G P
Sbjct: 568 FAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYP 627
Query: 232 NVVTYSALIYGFCIVGQLKQAIGLLDEMGLK-------------------NIDPDVYTYT 272
NV TY +L G + A+ L E+ + + PD
Sbjct: 628 NVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLD 687
Query: 273 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
L D + ++A ++A M + G+ P+ Y +
Sbjct: 688 TLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 145/317 (45%), Gaps = 6/317 (1%)
Query: 51 QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQIN 110
+M STP + + ++ S + + A ++ +M+ +G +PS +T I++ + +
Sbjct: 167 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 226
Query: 111 SAFSVLAGIL---KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
A V +L K +PD + +I G ++A + ++ +G + V+Y
Sbjct: 227 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 286
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
+L++ E S + ++R I+PDVV Y +I + + + A ++ EM+
Sbjct: 287 SLMSFETSYKEVSKIYDQMQR---SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G+ P Y+ L+ F I G ++QA + M I PD+++YT ++ A + A
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
+ + G +P++VTY +L+ GY N+V K +V+ M G + I++
Sbjct: 404 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 463
Query: 348 LCKIKMADEALNLLAEM 364
+ K AL EM
Sbjct: 464 SGRCKNFGSALGWYKEM 480
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 133/326 (40%), Gaps = 80/326 (24%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKP----SLVTMNILINCYCHLGQINSAFSVLAGI 119
VL +LV+ K +S +E+ + S + +LI Y LG N A VL+ +
Sbjct: 106 VLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVL 165
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
K G P+ I++T L++ SYG G C E
Sbjct: 166 SKMGSTPNVISYTALME----------------------------SYGR--GGKCNNAEA 195
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCK------------------------DKLVS 215
+ RR+Q G +P + Y I+ + + D+ +
Sbjct: 196 -----IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 250
Query: 216 H--------------AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL 261
H A ++S MV KG+ + VTY++L+ K+ + D+M
Sbjct: 251 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQR 307
Query: 262 KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
+I PDV +Y +L+ A G+ + EA ++ M+ GV+P YN L+D + + V +
Sbjct: 308 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 367
Query: 322 AQDVFNAMSQRGETPDVHSYNIIING 347
A+ VF +M + PD+ SY +++
Sbjct: 368 AKTVFKSMRRDRIFPDLWSYTTMLSA 393
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 8/208 (3%)
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+++ + LI KLG + A +L + G P+V+ Y +++S + ++A +
Sbjct: 137 FSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAI 196
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQA----IGLLDEMGLKNIDPDVYTYTILVD 276
+ M + G P+ +TY ++ F + K+A LLDE + PD Y +++
Sbjct: 197 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK-SPLKPDQKMYHMMIY 255
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
K G +A+ + + M+ +GV VTYNSLM EV+K +++ M + P
Sbjct: 256 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQP 312
Query: 337 DVHSYNIIINGLCKIKMADEALNLLAEM 364
DV SY ++I + + +EAL++ EM
Sbjct: 313 DVVSYALLIKAYGRARREEEALSVFEEM 340
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 104/218 (47%), Gaps = 3/218 (1%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+++M + P + + ++ + + + A+S+ +M G++P+ NIL++ +
Sbjct: 302 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G + A +V + + PD ++TT++ ++ A +F + GF N V+
Sbjct: 362 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 421
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
YGTLI G K + +E+ +++ GIK + + TI+D+ + K A Y EM
Sbjct: 422 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEME 481
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN 263
+ G+ P+ + L+ +L++A L G++N
Sbjct: 482 SCGVPPDQKAKNVLLSLASTQDELEEAKEL---TGIRN 516
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 91/220 (41%)
Query: 74 YSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTT 133
Y + QM+ + I+P +V+ +LI Y + A SV +L G +P +
Sbjct: 295 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 354
Query: 134 LIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
L+ + G +++A + + SY T+++ + A + +RI+ G
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 414
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
+P++V Y T+I K V ++Y +M GI N + ++ A+
Sbjct: 415 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSAL 474
Query: 254 GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
G EM + PD +L+ + ++ EAK + +
Sbjct: 475 GWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGI 514
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 109/256 (42%), Gaps = 3/256 (1%)
Query: 70 KTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTI 129
K +Y A + M G+ S VT N L++ +++ + + + QPD +
Sbjct: 259 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ---RSDIQPDVV 315
Query: 130 TFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRI 189
++ LIK + + AL +++L G +Y L++ G A + + +
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 190 QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
+ I PD+ Y T++ + + A + + G PN+VTY LI G+ +
Sbjct: 376 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 435
Query: 250 KQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
++ + + ++M L I + T ++DA G+ A M GV PD N L
Sbjct: 436 EKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVL 495
Query: 310 MDGYCLVNEVNKAQDV 325
+ +E+ +A+++
Sbjct: 496 LSLASTQDELEEAKEL 511
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 135/300 (45%), Gaps = 3/300 (1%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
P A+ FN+M+Q+ +P + + ++ V A ++ +++ G+ P +V N
Sbjct: 262 EPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCN 321
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
++I+ Y LG+ A V + KR PD TF +++ LCL GK + +
Sbjct: 322 LMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI--- 378
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + V+ L N K+G S AL++L + + D Y + +LC+ A
Sbjct: 379 GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA 438
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+Y ++ + + +SA+I +G+ A+ L L+ DV +YT+ +
Sbjct: 439 IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKG 498
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L + ++ EA ++ M + G+ P+ TY +++ G C E K + + Q G D
Sbjct: 499 LVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 147/319 (46%), Gaps = 5/319 (1%)
Query: 47 NRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL 106
RM+ P F ++L +T S A + M +GI S+ ++L++ +
Sbjct: 201 KRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRS 260
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
G+ A + +++ G P+ +T+T+LIKG G + A V ++G + V
Sbjct: 261 GEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLC 320
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV- 225
+I+ +LG A ++ ++ R + PD + +I+ SLC +S FDL +
Sbjct: 321 NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC----LSGKFDLVPRITH 376
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
G ++VT + L F +G A+ +L M K+ D YTYT+ + AL + G R
Sbjct: 377 GIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPR 436
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
A M ++IK+ D +++++D + + N A +F DV SY + I
Sbjct: 437 AAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAI 496
Query: 346 NGLCKIKMADEALNLLAEM 364
GL + K +EA +L +M
Sbjct: 497 KGLVRAKRIEEAYSLCCDM 515
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 141/297 (47%), Gaps = 16/297 (5%)
Query: 74 YSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTT 133
Y AI + M G P+ MN++++ L +N A + GI R + +F
Sbjct: 124 YDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF----FSFDI 179
Query: 134 LIKGLCLHGK------IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLR 187
+ C G ++ L+ ++ +GF N+ +G ++ C+ G S A +++
Sbjct: 180 ALSHFCSRGGRGDLVGVKIVLK---RMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVG 236
Query: 188 RIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVG 247
+ GI V +++ ++ + A DL+++M+ G SPN+VTY++LI GF +G
Sbjct: 237 LMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLG 296
Query: 248 QLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYN 307
+ +A +L ++ + + PD+ +++ + G+ EA+ + + K+ + PD T+
Sbjct: 297 MVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFA 356
Query: 308 SLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
S++ CL + + + + + G D+ + N++ N KI AL +L+ M
Sbjct: 357 SILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIM 410
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 141/304 (46%), Gaps = 5/304 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
++ +++ ++ A+ L ++M G P+LVT LI + LG ++ AF+VL+ +
Sbjct: 250 WSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQ 309
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G PD + +I G+ + A + + + + +Q ++ ++++ LC S
Sbjct: 310 SEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC----LS 365
Query: 181 AALELLRRI-QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
+L+ RI G G D+V N + + K S+A + S M K + + TY+
Sbjct: 366 GKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVY 425
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
+ C G + AI + + + D + ++ ++D+L + GK A ++ I +
Sbjct: 426 LSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKY 485
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
DVV+Y + G + +A + M + G P+ +Y II+GLCK K ++
Sbjct: 486 PLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRK 545
Query: 360 LLAE 363
+L E
Sbjct: 546 ILRE 549
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 135/284 (47%), Gaps = 11/284 (3%)
Query: 71 TKHYSTAISLSHQMEFTG--IKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDT 128
T+ Y + + +++ +G IKP + + + I H+ + A V G+ G+ P+T
Sbjct: 86 TREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHI--YDKAIEVYTGMSSFGFVPNT 143
Query: 129 ITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG---ETSAALEL 185
++ + AL+ + + + F S+ ++ C G + +
Sbjct: 144 RAMNMMMDVNFKLNVVNGALEIFEGIRFRNFF----SFDIALSHFCSRGGRGDLVGVKIV 199
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
L+R+ G G P+ + I+ C+ VS AF + M+ GIS +V +S L+ GF
Sbjct: 200 LKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFR 259
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ ++A+ L ++M P++ TYT L+ G V EA +L+ + +G+ PD+V
Sbjct: 260 SGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVL 319
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
N ++ Y + +A+ VF ++ +R PD +++ I++ LC
Sbjct: 320 CNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 7/249 (2%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A F + + P + F +L+SL + + ++H + G LVT N+L
Sbjct: 335 EARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLS 391
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
NC+ +G + A VL+ + + + D T+T + LC G + A++ + ++ +
Sbjct: 392 NCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKH 451
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
L+ + +I+ L +LG+ + A+ L +R DVV Y I L + K + A+ L
Sbjct: 452 LDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSL 511
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT----YTILVD 276
+M GI PN TY +I G C + ++ +L E + ++ D T Y++L
Sbjct: 512 CCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSR 571
Query: 277 ALGKEGKVR 285
G + R
Sbjct: 572 YRGDFSEFR 580
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 145/317 (45%), Gaps = 6/317 (1%)
Query: 51 QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQIN 110
+M STP + + ++ S + + A ++ +M+ +G +PS +T I++ + +
Sbjct: 174 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 233
Query: 111 SAFSVLAGIL---KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
A V +L K +PD + +I G ++A + ++ +G + V+Y
Sbjct: 234 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 293
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
+L++ E S + ++R I+PDVV Y +I + + + A ++ EM+
Sbjct: 294 SLMSFETSYKEVSKIYDQMQR---SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G+ P Y+ L+ F I G ++QA + M I PD+++YT ++ A + A
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 410
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
+ + G +P++VTY +L+ GY N+V K +V+ M G + I++
Sbjct: 411 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 470
Query: 348 LCKIKMADEALNLLAEM 364
+ K AL EM
Sbjct: 471 SGRCKNFGSALGWYKEM 487
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 144/308 (46%), Gaps = 6/308 (1%)
Query: 60 EFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
+F ++T+ K +++ A + + G P++++ L+ Y G+ N+A ++ +
Sbjct: 148 DFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM 207
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG---FLLNQVSYGTLINGLCKL 176
G +P IT+ ++K K + A + + +L + +Q Y +I K
Sbjct: 208 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 267
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTY 236
G A ++ + G+G+ V YN+++ K VS +Y +M I P+VV+Y
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSY 324
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
+ LI + + ++A+ + +EM + P Y IL+DA G V +AK + M +
Sbjct: 325 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 384
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADE 356
+ PD+ +Y +++ Y +++ A+ F + G P++ +Y +I G K ++
Sbjct: 385 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 444
Query: 357 ALNLLAEM 364
+ + +M
Sbjct: 445 MMEVYEKM 452
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 133/326 (40%), Gaps = 80/326 (24%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKP----SLVTMNILINCYCHLGQINSAFSVLAGI 119
VL +LV+ K +S +E+ + S + +LI Y LG N A VL+ +
Sbjct: 113 VLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVL 172
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
K G P+ I++T L++ SYG G C E
Sbjct: 173 SKMGSTPNVISYTALME----------------------------SYGR--GGKCNNAEA 202
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCK------------------------DKLVS 215
+ RR+Q G +P + Y I+ + + D+ +
Sbjct: 203 -----IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 257
Query: 216 H--------------AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL 261
H A ++S MV KG+ + VTY++L+ K+ + D+M
Sbjct: 258 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQR 314
Query: 262 KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
+I PDV +Y +L+ A G+ + EA ++ M+ GV+P YN L+D + + V +
Sbjct: 315 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 374
Query: 322 AQDVFNAMSQRGETPDVHSYNIIING 347
A+ VF +M + PD+ SY +++
Sbjct: 375 AKTVFKSMRRDRIFPDLWSYTTMLSA 400
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 8/208 (3%)
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+++ + LI KLG + A +L + G P+V+ Y +++S + ++A +
Sbjct: 144 FSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAI 203
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQA----IGLLDEMGLKNIDPDVYTYTILVD 276
+ M + G P+ +TY ++ F + K+A LLDE + PD Y +++
Sbjct: 204 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK-SPLKPDQKMYHMMIY 262
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
K G +A+ + + M+ +GV VTYNSLM EV+K +++ M + P
Sbjct: 263 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQP 319
Query: 337 DVHSYNIIINGLCKIKMADEALNLLAEM 364
DV SY ++I + + +EAL++ EM
Sbjct: 320 DVVSYALLIKAYGRARREEEALSVFEEM 347
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 104/218 (47%), Gaps = 3/218 (1%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+++M + P + + ++ + + + A+S+ +M G++P+ NIL++ +
Sbjct: 309 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 368
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G + A +V + + PD ++TT++ ++ A +F + GF N V+
Sbjct: 369 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 428
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
YGTLI G K + +E+ +++ GIK + + TI+D+ + K A Y EM
Sbjct: 429 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEME 488
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN 263
+ G+ P+ + L+ +L++A L G++N
Sbjct: 489 SCGVPPDQKAKNVLLSLASTQDELEEAKEL---TGIRN 523
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 91/220 (41%)
Query: 74 YSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTT 133
Y + QM+ + I+P +V+ +LI Y + A SV +L G +P +
Sbjct: 302 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 361
Query: 134 LIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
L+ + G +++A + + SY T+++ + A + +RI+ G
Sbjct: 362 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 421
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
+P++V Y T+I K V ++Y +M GI N + ++ A+
Sbjct: 422 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSAL 481
Query: 254 GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
G EM + PD +L+ + ++ EAK + +
Sbjct: 482 GWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGI 521
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 109/256 (42%), Gaps = 3/256 (1%)
Query: 70 KTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTI 129
K +Y A + M G+ S VT N L++ +++ + + + QPD +
Sbjct: 266 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ---RSDIQPDVV 322
Query: 130 TFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRI 189
++ LIK + + AL +++L G +Y L++ G A + + +
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 190 QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
+ I PD+ Y T++ + + A + + G PN+VTY LI G+ +
Sbjct: 383 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 442
Query: 250 KQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
++ + + ++M L I + T ++DA G+ A M GV PD N L
Sbjct: 443 EKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVL 502
Query: 310 MDGYCLVNEVNKAQDV 325
+ +E+ +A+++
Sbjct: 503 LSLASTQDELEEAKEL 518
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 138/323 (42%), Gaps = 2/323 (0%)
Query: 38 NPGDAISHFNRMLQ-MPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTM 96
NP A N +L+ M + + +N + K+K + L +M GIKP T
Sbjct: 154 NPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATF 213
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
+I+C G A + G +PD +T +I G + AL +D
Sbjct: 214 TTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRART 273
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+ + ++ V++ TLI G L + ++ G+KP++V+YN +IDS+ + K
Sbjct: 274 EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQ 333
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A +Y +++ G +PN TY+AL+ + A+ + EM K + V Y L+
Sbjct: 334 AKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS 393
Query: 277 ALGKEGKVREAKNMLAVMIK-QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
V EA + M + PD T++SL+ Y V++A+ M + G
Sbjct: 394 MCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFE 453
Query: 336 PDVHSYNIIINGLCKIKMADEAL 358
P + +I K K D+ +
Sbjct: 454 PTLFVLTSVIQCYGKAKQVDDVV 476
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 110/238 (46%)
Query: 127 DTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELL 186
+ I + +K ++++ + D++L +G + ++ T+I+ + G A+E
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIV 246
++ G +PD V +ID+ + V A LY + + VT+S LI + +
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
G + + +EM + P++ Y L+D++G+ + +AK + +I G P+ TY
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+L+ Y + A ++ M ++G + V YN +++ + DEA + +M
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 141/275 (51%), Gaps = 27/275 (9%)
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ 149
+P + LI C +G+I A + G+ +R D +T+T +I G G ++ A +
Sbjct: 43 RPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARE 98
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
D V ++ N V++ +++G + + S A L + + R +VV +NT+ID
Sbjct: 99 LFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYA 151
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
+ + A +L+ EM + N+V++++++ G++ +A+ L + M + DV
Sbjct: 152 QSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVV 203
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
++T +VD L K GKV EA+ + M ++ +++++N+++ GY N +++A +F M
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVM 259
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+R D S+N +I G + + ++A L M
Sbjct: 260 PER----DFASWNTMITGFIRNREMNKACGLFDRM 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/326 (18%), Positives = 140/326 (42%), Gaps = 12/326 (3%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+ I +++ Q+ +N ++T ++ + + A L +M + ++++ +I
Sbjct: 247 NRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP----EKNVISWTTMI 302
Query: 101 NCYCHLGQINSAFSVLAGILKRG-YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
Y + A +V + +L+ G +P+ T+ +++ + Q H +
Sbjct: 303 TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH 362
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
N++ L+N K GE AA ++ G + D++ +N++I A +
Sbjct: 363 QKNEIVTSALLNMYSKSGELIAARKMFD--NGLVCQRDLISWNSMIAVYAHHGHGKEAIE 420
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP-DVYTYTILVDAL 278
+Y++M G P+ VTY L++ G +++ + ++ P YT LVD
Sbjct: 421 MYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLC 480
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
G+ G++++ N + + Y +++ + NEV+ A++V + + G + D
Sbjct: 481 GRAGRLKDVTNFINC---DDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG-SDDA 536
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
+Y ++ N +EA + +M
Sbjct: 537 GTYVLMSNIYAANGKREEAAEMRMKM 562
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 139/362 (38%), Gaps = 78/362 (21%)
Query: 51 QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQIN 110
+MP + +N ++ ++ A+ L +M + ++V+ N ++ G+I+
Sbjct: 134 EMPERN-VVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRID 188
Query: 111 SAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHD----------DVLAQGFL 160
A ++ + +R D +++T ++ GL +GK+ A + D + + G+
Sbjct: 189 EAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYA 244
Query: 161 LNQ-----------------VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
N S+ T+I G + E + A L R+ + +V+ + T
Sbjct: 245 QNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP----EKNVISWTT 300
Query: 204 IIDSLCKDKLVSHAFDLYSEMVAKG-ISPNVVTY-------------------------- 236
+I ++K A +++S+M+ G + PNV TY
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 237 ---------SALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
SAL+ + G+L A + D GL D+ ++ ++ G +EA
Sbjct: 361 VHQKNEIVTSALLNMYSKSGELIAARKMFDN-GLV-CQRDLISWNSMIAVYAHHGHGKEA 418
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
M M K G KP VTY +L+ V K + F + + P + +
Sbjct: 419 IEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVD 478
Query: 348 LC 349
LC
Sbjct: 479 LC 480
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
F+L + + P V LI C VG++ +A L D GL + DV T+T ++
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFD--GLP--ERDVVTWTHVITG 86
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
K G +REA+ + + + +VVT+ +++ GY +++ A+ +F M +R +
Sbjct: 87 YIKLGDMREARELFD---RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----N 139
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
V S+N +I+G + D+AL L EM
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEM 166
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 158/346 (45%), Gaps = 44/346 (12%)
Query: 58 IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLV---TMNILINCYCHLGQINSAFS 114
+ E++ +++ L K + + TA +L +M PSLV T+ I+I YC + + A +
Sbjct: 161 VREYHSMISILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIMIRKYCAVHDVGKAIN 218
Query: 115 VL------------------------------AGIL----KRGYQPDTITFTTLIKGLC- 139
AG L K Y D +F ++ G C
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCN 278
Query: 140 LHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVV 199
+ G + A + ++ G + VSY ++I+ K G + L+L R++ I+PD
Sbjct: 279 VIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRK 338
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVA-KGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 258
+YN ++ +L K VS A +L M KGI PNVVTY++LI C + ++A + DE
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 259 MGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE 318
M K + P + TY + L +V E +LA M K G +P V TY L+ C +
Sbjct: 399 MLEKGLFPTIRTYHAFMRILRTGEEVFE---LLAKMRKMGCEPTVETYIMLIRKLCRWRD 455
Query: 319 VNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ +++ M ++ PD+ SY ++I+GL +EA EM
Sbjct: 456 FDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 501
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 132/301 (43%), Gaps = 43/301 (14%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISL----SHQMEFTGIKPSLVT 95
G AI+ F+ + I +F +L++L + K+ S A L + F +
Sbjct: 214 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDA-----KS 268
Query: 96 MNILINCYCH-LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDV 154
NI++N +C+ +G A V + G + D ++++++I G + + L+ D +
Sbjct: 269 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRM 328
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQG-RGIKPDVVMYNTIIDSLCKDKL 213
+ ++ Y +++ L K S A L++ ++ +GI+P+VV YN++I LCK +
Sbjct: 329 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARK 388
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSA--------------------------------LIY 241
A ++ EM+ KG+ P + TY A LI
Sbjct: 389 TEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIR 448
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP 301
C + L DEM K + PD+ +Y +++ L GK+ EA M +G++P
Sbjct: 449 KLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 508
Query: 302 D 302
+
Sbjct: 509 N 509
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 9/213 (4%)
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTI---IDSLCKDKL 213
QG++ + Y ++I+ L K+ + A L+ + R P +V T+ I C
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHD 212
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP-DVYTYT 272
V A + + + + + +L+ C + A L+ K+ P D ++
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFN 270
Query: 273 ILVDALGKE-GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
I+++ G REA+ + M GVK DVV+Y+S++ Y +NK +F+ M +
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 332 RGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
PD YN +++ L K EA NL+ M
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTM 363
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 1/265 (0%)
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+LI Y G + + + + G + ++ +L K + G+ A ++ + ++++
Sbjct: 190 VLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE 249
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + +Y ++ G AL ++ RGI PD +NT+I+ C+ K + A
Sbjct: 250 GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEA 309
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L+ EM I P+VV+Y+ +I G+ V ++ + + +EM I+P+ TY+ L+
Sbjct: 310 EKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPG 369
Query: 278 LGKEGKVREAKNMLAVMIKQGVKP-DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
L GK+ EAKN+L M+ + + P D + L+ ++ A +V AM+
Sbjct: 370 LCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPA 429
Query: 337 DVHSYNIIINGLCKIKMADEALNLL 361
+ Y ++I CK + A+ LL
Sbjct: 430 EAGHYGVLIENQCKASAYNRAIKLL 454
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 133/282 (47%), Gaps = 9/282 (3%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
++ + +M+ G++ ++ + N L G+ A ++ G +P T+ ++
Sbjct: 204 SVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLW 263
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
G L +++ AL+F +D+ +G + ++ T+ING C+ + A +L ++G I P
Sbjct: 264 GFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 197 DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 256
VV Y T+I V ++ EM + GI PN TYS L+ G C G++ +A +L
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL 383
Query: 257 DEMGLKNIDP-DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCL 315
M K+I P D + L+ + K G + A +L M V + Y L++ C
Sbjct: 384 KNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCK 443
Query: 316 VNEVNKAQDVFNAMSQR------GETPDVH--SYNIIINGLC 349
+ N+A + + + ++ +T ++ +YN II LC
Sbjct: 444 ASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLC 485
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 118/238 (49%)
Query: 127 DTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELL 186
D T +IK L K+ A D+ +G ++ + LI K G ++++
Sbjct: 149 DRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIF 208
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIV 246
++++ G++ + YN++ + + A +++MV++G+ P TY+ +++GF +
Sbjct: 209 QKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLS 268
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
+L+ A+ ++M + I PD T+ +++ + K+ EA+ + M + P VV+Y
Sbjct: 269 LRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSY 328
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+++ GY V+ V+ +F M G P+ +Y+ ++ GLC EA N+L M
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 136/350 (38%), Gaps = 43/350 (12%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A +FN+M+ P +N +L + TA+ M+ GI P T N +IN
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMIN 298
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+C +++ A + + P +++TT+IKG ++ L+ +++ + G
Sbjct: 299 GFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEP 358
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP-DVVMYNTIIDSLCKDKLVSHAFDL 220
N +Y TL+ GLC G+ A +L+ + + I P D ++ ++ S K ++ A ++
Sbjct: 359 NATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEV 418
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNI----------DPDVYT 270
M + Y LI C +AI LLD + K I +P Y
Sbjct: 419 LKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYN 478
Query: 271 YTI--------------------------------LVDALGKEGKVREAKNMLAVMIKQG 298
I L+ KEG + +L +M ++G
Sbjct: 479 PIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRG 538
Query: 299 VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
V + Y L+ Y E A+ ++M + G PD + +I L
Sbjct: 539 VPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESL 588
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 145/333 (43%), Gaps = 10/333 (3%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+++ F +M + I +N + +++ Y A ++M G++P+ T N+++
Sbjct: 203 ESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLML 262
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ ++ +A + RG PD TF T+I G C K+ A + ++
Sbjct: 263 WGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIG 322
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ VSY T+I G + L + ++ GI+P+ Y+T++ LC + A ++
Sbjct: 323 PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 221 YSEMVAKGISP-NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
M+AK I+P + + L+ G + A +L M N+ + Y +L++
Sbjct: 383 LKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC 442
Query: 280 KEGKVREAKNMLAVMIKQGV--------KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
K A +L +I++ + + + YN +++ C + KA+ +F + +
Sbjct: 443 KASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMK 502
Query: 332 RGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
RG D + N +I G K D + +L M
Sbjct: 503 RG-VQDQDALNNLIRGHAKEGNPDSSYEILKIM 534
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 123/285 (43%), Gaps = 1/285 (0%)
Query: 57 PIFEFNKVLTSLVKTKHYSTAISLSHQMEFTG-IKPSLVTMNILINCYCHLGQINSAFSV 115
P ++ + V L K A+ E +G I+ T +I + ++N A +
Sbjct: 113 PEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCI 172
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L + ++G D F LI+ G +Q +++ + G SY +L + +
Sbjct: 173 LLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILR 232
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G A ++ G++P YN ++ + A + +M +GISP+ T
Sbjct: 233 RGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDAT 292
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++ +I GFC ++ +A L EM I P V +YT ++ +V + + M
Sbjct: 293 FNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMR 352
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G++P+ TY++L+ G C ++ +A+++ M + P +S
Sbjct: 353 SSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS 397
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 1/184 (0%)
Query: 182 ALELLRRIQGRG-IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
AL+ R + G I+ D + +I L + ++HA + +M KG+ + + LI
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLI 192
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
+ G +++++ + +M ++ + +Y L + + G+ AK M+ +GV+
Sbjct: 193 ESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVE 252
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
P TYN ++ G+ L + A F M RG +PD ++N +ING C+ K DEA L
Sbjct: 253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKL 312
Query: 361 LAEM 364
EM
Sbjct: 313 FVEM 316
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/331 (18%), Positives = 134/331 (40%), Gaps = 47/331 (14%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + + ++ + + + +M +GI+P+ T + L+ C G++ A ++
Sbjct: 323 PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 116 LAGILKRGYQP-----------------DTITFTTLIKGL-------------------C 139
L ++ + P D T ++K + C
Sbjct: 383 LKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC 442
Query: 140 LHGKIQRALQFHDDVLAQGFLLNQ--------VSYGTLINGLCKLGETSAALELLRRIQG 191
RA++ D ++ + +L +Y +I LC G+T+ A L R++
Sbjct: 443 KASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMK 502
Query: 192 RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQ 251
RG++ D N +I K+ ++++ M +G+ Y LI + G+
Sbjct: 503 RGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGD 561
Query: 252 AIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ--GVKPDVVTYNSL 309
A LD M PD + ++++L ++G+V+ A ++ +MI + G++ ++ +
Sbjct: 562 AKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKI 621
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
++ + V +A + ++Q G T D+ S
Sbjct: 622 LEALLMRGHVEEALGRIDLLNQNGHTADLDS 652
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 136/306 (44%), Gaps = 5/306 (1%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFT-GIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+KV+ L K+ Y+ A+ +ME + G+K + MN L++ I A V +
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+PD TF LI G C K A D + F + V+Y + + CK G+
Sbjct: 267 D-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
E+L ++ G P+VV Y ++ SL K K V+ A +Y +M G P+ YS+LI
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK---Q 297
+ G+ K A + ++M + + DV Y ++ A + A +L M +
Sbjct: 386 HILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGE 445
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
P+V TY L+ C ++ + + M + + DV +Y ++I GLC +EA
Sbjct: 446 SCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
Query: 358 LNLLAE 363
E
Sbjct: 506 CLFFEE 511
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 130 TFTTLIKGLCLHGKIQRALQ-FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRR 188
T + +++ L GK +A+ F + + G + ++ +L++ L K A E+ +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 189 IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQ 248
+ IKPD +N +I CK + A + M +P+VVTY++ + +C G
Sbjct: 265 LFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNS 308
++ +L+EM +P+V TYTI++ +LGK +V EA + M + G PD Y+S
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 309 LMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
L+ A ++F M+ +G DV YN +I+ + AL LL M
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 119/259 (45%), Gaps = 3/259 (1%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P FN ++ K + + A ++ M+ T P +VT + YC G +
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L + + G P+ +T+T ++ L ++ AL ++ + G + + Y +LI+ L K
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSL---CKDKLVSHAFDLYSEMVAKGISPN 232
G A E+ + +G++ DV++YNT+I + +D++ + + SPN
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 233 VVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLA 292
V TY+ L+ C ++K LL M ++ DV TY +L+ L GKV EA
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510
Query: 293 VMIKQGVKPDVVTYNSLMD 311
+++G+ P T L+D
Sbjct: 511 EAVRKGMVPRDSTCKMLVD 529
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 10/259 (3%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + + M TP + + + + K + + +M G P++VT I++
Sbjct: 291 DARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM 350
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ Q+ A V + + G PD +++LI L G+ + A + +D+ QG
Sbjct: 351 HSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVR 410
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRI---QGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ + Y T+I+ AL LL+R+ +G P+V Y ++ C K +
Sbjct: 411 RDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLL 470
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L MV +S +V TY LI G C+ G++++A +E K + P T +LVD
Sbjct: 471 GILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDE 530
Query: 278 LGKEGKVREAKNMLAVMIK 296
L E KNM +K
Sbjct: 531 L-------EKKNMAEAKLK 542
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 150/322 (46%), Gaps = 14/322 (4%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M++ P F F K+L + + G+ L N ++ Y
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK 228
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
G+++ A +R + D I + +++ C +GK + A++ ++ +G V+
Sbjct: 229 CGELDFA----TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+ LI G +LG+ AA++L+++++ GI DV + +I L + + A D++ +M
Sbjct: 285 WNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 226 AKGISPNVVT-YSALIYGFC--IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
G+ PN VT SA+ C ++ Q + + +MG ID DV LVD K G
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF--ID-DVLVGNSLVDMYSKCG 401
Query: 283 KVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN 342
K+ +A+ + + + DV T+NS++ GYC KA ++F M P++ ++N
Sbjct: 402 KLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWN 457
Query: 343 IIINGLCKIKMADEALNLLAEM 364
+I+G K EA++L M
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRM 479
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 151/406 (37%), Gaps = 110/406 (27%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A F RM + + +N VL + + + A+ L +ME GI P LVT NILI
Sbjct: 235 ATKFFRRMRERD----VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ------------ 149
Y LG+ ++A ++ + G D T+T +I GL +G +AL
Sbjct: 291 GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 150 --------------------------------FHDDVLAQGFLLNQVS------------ 165
F DDVL L++ S
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 166 ----------YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
+ ++I G C+ G A EL R+Q ++P+++ +NT+I K+
Sbjct: 411 DSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEG 470
Query: 216 HAFDLYSEMVAKG-ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT---- 270
A DL+ M G + N T++ +I G+ G+ +A+ L +M P+ T
Sbjct: 471 EAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSL 530
Query: 271 -------------------------------YTILVDALGKEGKVREAKNMLAVMIKQGV 299
L D K G + ++ + M +
Sbjct: 531 LPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK-- 588
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
D++T+NSL+ GY L A +FN M +G TP+ + + II
Sbjct: 589 --DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 152/359 (42%), Gaps = 51/359 (14%)
Query: 45 HFNRMLQ----MPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
H R+L + + P +F K+L+ K + A + M + +L T + +I
Sbjct: 98 HLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR----ERNLFTWSAMI 153
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
Y + + ++K G PD F +++G G ++ H V+ G
Sbjct: 154 GAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMS 213
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+++ K GE A + RR++ R DV+ +N+++ + C++ A +L
Sbjct: 214 SCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVEL 269
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
EM +GISP +VT++ LI G+ +G+ A+ L+ +M I DV+T+T ++ L
Sbjct: 270 VKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIH 329
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTY---------------------------------- 306
G +A +M M GV P+ VT
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 307 -NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
NSL+D Y ++ A+ VF+++ + DV+++N +I G C+ +A L M
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRM 444
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 132/310 (42%), Gaps = 19/310 (6%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTG-IKPSLVTMNI 98
G A F RM P I +N +++ +K A+ L +ME G ++ + T N+
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL 494
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLC--LHGKIQRALQFHDDVLA 156
+I Y G+ + A + + + P+++T +L+ L K+ R + H VL
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVR--EIHGCVLR 552
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+ N + + N L S +E R I D++ +N++I
Sbjct: 553 R----NLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGP 608
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLK-NIDPDVYTYTILV 275
A L+++M +GI+PN T S++I ++G + + + + +I P + + +V
Sbjct: 609 ALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMV 668
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN-----EVNKAQDVFNAMS 330
G+ ++ EA + M Q P + S + G C ++ ++ A+++F+
Sbjct: 669 YLYGRANRLEEALQFIQEMNIQSETP---IWESFLTG-CRIHGDIDMAIHAAENLFSLEP 724
Query: 331 QRGETPDVHS 340
+ T + S
Sbjct: 725 ENTATESIVS 734
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 5/204 (2%)
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y LI+ + K G+T A+ L ++ G +PD +YN +I + + + A + +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 226 --AKGIS---PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
KGI PNVVTY+ L+ F G++ Q L ++ + + PDVYT+ ++DA GK
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G ++E + +L M KPD++T+N L+D Y E K + F ++ + E P + +
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
+N +I K +M D+A + +M
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKM 339
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 113/236 (47%), Gaps = 7/236 (2%)
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+R Y PD ++ LI + G+ + A+ ++ G + Y LI + +
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 185
Query: 181 AALELLR----RIQG-RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
ALE +R +++G +P+VV YN ++ + + V L+ ++ +SP+V T
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++ ++ + G +K+ +L M PD+ T+ +L+D+ GK+ + + + ++
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN--IIINGLC 349
+ KP + T+NS++ Y ++KA+ VF M+ P +Y I++ G C
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 128/309 (41%), Gaps = 5/309 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
++K+++ + K A+ L +M+ +G +P N LI + H A + G L
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 121 KR-----GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ QP+ +T+ L++ GK+ + D+ + ++ +++ K
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G +L R++ KPD++ +N +IDS K + + ++ P + T
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++++I + + +A + +M N P TY ++ G G V A+ + +
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
+ T N++++ YC +A +F+ S PD +Y + K M +
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKE 435
Query: 356 EALNLLAEM 364
+ L+ +M
Sbjct: 436 QVQILMKKM 444
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 8/231 (3%)
Query: 53 PSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSA 112
P +P ++ FN V+ + K ++ +M KP ++T N+LI+ Y +
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM 297
Query: 113 FSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLI-- 170
+++ +P TF ++I I +A + ++ + ++Y +I
Sbjct: 298 EQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMM 357
Query: 171 NGLCKLGETSAALELLRRI--QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
G C G S A E+ + R +K + N +++ C++ L A L+ A
Sbjct: 358 YGYC--GSVSRAREIFEEVGESDRVLKASTL--NAMLEVYCRNGLYIEADKLFHNASAFR 413
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ P+ TY L + +Q L+ +M I P+ + ++ G
Sbjct: 414 VHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 131/273 (47%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH 151
S N +I ++ AF + G + DT T+ L+ G +A + +
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
+ + LL+ +Y +I L K G AA +L ++++ R ++P ++++++DS+ K
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTY 271
+ + +Y EM G P+ + +LI + G+L A+ L DEM P+ Y
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
T+++++ K GK+ A + M K G P TY+ L++ + +V+ A ++N+M+
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 332 RGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
G P + SY ++ L ++ D A +L EM
Sbjct: 482 AGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 3/305 (0%)
Query: 44 SHFNRMLQMPSTPPIFEFN---KVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
S F M+Q S+ FN +V+ L K + A + + +G K T N L+
Sbjct: 226 SLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLM 285
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + G AF + + K D T+ +I L G++ A + + +
Sbjct: 286 MLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLR 345
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ + +L++ + K G ++++ +QG G +P M+ ++IDS K + A L
Sbjct: 346 PSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRL 405
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM G PN Y+ +I G+L+ A+ + +M P TY+ L++
Sbjct: 406 WDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAG 465
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G+V A + M G++P + +Y SL+ V+ A + M G + DV +
Sbjct: 466 SGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCA 525
Query: 341 YNIII 345
++++
Sbjct: 526 SDVLM 530
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 131/289 (45%), Gaps = 1/289 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A F +M + P F+ ++ S+ K T++ + +M+ G +PS LI+
Sbjct: 332 AFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLID 391
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y G++++A + + K G++P+ +T +I+ GK++ A+ D+ GFL
Sbjct: 392 SYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP 451
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+Y L+ G+ +A+++ + G++P + Y +++ L +LV A +
Sbjct: 452 TPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKIL 511
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM A G S +V L+ + + A+ L MG I + + L ++ K
Sbjct: 512 LEMKAMGYSVDVCASDVLMI-YIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKN 570
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
G A+ +L ++ K D+V Y S++ + +K + + + +S
Sbjct: 571 GLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMSILS 619
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 5/204 (2%)
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y LI+ + K G+T A+ L ++ G +PD +YN +I + + + A + +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 226 --AKGIS---PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
KGI PNVVTY+ L+ F G++ Q L ++ + + PDVYT+ ++DA GK
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G ++E + +L M KPD++T+N L+D Y E K + F ++ + E P + +
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
+N +I K +M D+A + +M
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKM 339
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 113/236 (47%), Gaps = 7/236 (2%)
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+R Y PD ++ LI + G+ + A+ ++ G + Y LI + +
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 185
Query: 181 AALELLR----RIQG-RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
ALE +R +++G +P+VV YN ++ + + V L+ ++ +SP+V T
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++ ++ + G +K+ +L M PD+ T+ +L+D+ GK+ + + + ++
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN--IIINGLC 349
+ KP + T+NS++ Y ++KA+ VF M+ P +Y I++ G C
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 128/309 (41%), Gaps = 5/309 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
++K+++ + K A+ L +M+ +G +P N LI + H A + G L
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 121 KR-----GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ QP+ +T+ L++ GK+ + D+ + ++ +++ K
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G +L R++ KPD++ +N +IDS K + + ++ P + T
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++++I + + +A + +M N P TY ++ G G V A+ + +
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
+ T N++++ YC +A +F+ S PD +Y + K M +
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKE 435
Query: 356 EALNLLAEM 364
+ L+ +M
Sbjct: 436 QVQILMKKM 444
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 8/231 (3%)
Query: 53 PSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSA 112
P +P ++ FN V+ + K ++ +M KP ++T N+LI+ Y +
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM 297
Query: 113 FSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLI-- 170
+++ +P TF ++I I +A + ++ + ++Y +I
Sbjct: 298 EQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMM 357
Query: 171 NGLCKLGETSAALELLRRI--QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
G C G S A E+ + R +K + N +++ C++ L A L+ A
Sbjct: 358 YGYC--GSVSRAREIFEEVGESDRVLKASTL--NAMLEVYCRNGLYIEADKLFHNASAFR 413
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ P+ TY L + +Q L+ +M I P+ + ++ G
Sbjct: 414 VHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N +L +L K + A +L +M G+KP T IL+N +C G++ A L +
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+RG+ P LI+GL G ++ A + + GF+ + ++ LI + K GE
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVE 304
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
+E+ G+ D+ Y T+I ++ K + AF L + V G P Y+ +I
Sbjct: 305 FCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPII 364
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G C G A +M +K P+ YT+L+ G+ GK +A N L M + G+
Sbjct: 365 KGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLV 424
Query: 301 PDVVTYNSLMDG 312
P ++ + DG
Sbjct: 425 PISRCFDMVTDG 436
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
Y P ++ + L K L H K + + + ++ + +I K G A+
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 184 ELLRRI-QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYG 242
EL + + G + V +YN+++ +LC K+ A+ L M+ KG+ P+ TY+ L+ G
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 243 FCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD 302
+C G++K+A LDEM + +P +L++ L G + AK M++ M K G PD
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Query: 303 VVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
+ T+N L++ EV +++ + G D+ +Y +I + KI DEA LL
Sbjct: 287 IQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLL 345
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 141/326 (43%), Gaps = 2/326 (0%)
Query: 41 DAISHFNRMLQMPS-TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
D++ FN PS TP E+ ++ SL K Y + + QM+ + S T+ +
Sbjct: 93 DSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFI 152
Query: 100 INCYCHLGQINSAFSVLAGILKR-GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
I Y G ++ A + G+ K G Q + +L+ LC A ++ +G
Sbjct: 153 IEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKG 212
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
++ +Y L+NG C G+ A E L + RG P + +I+ L + A
Sbjct: 213 LKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAK 272
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
++ S+M G P++ T++ LI G+++ I + + D+ TY L+ A+
Sbjct: 273 EMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAV 332
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
K GK+ EA +L ++ G KP Y ++ G C + A F+ M + P+
Sbjct: 333 SKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNR 392
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
Y ++I + +A N L EM
Sbjct: 393 PVYTMLITMCGRGGKFVDAANYLVEM 418
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 92/257 (35%), Gaps = 40/257 (15%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + M + PP + ++ L+ + +A + +M G P + T NILI
Sbjct: 235 EAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILI 294
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
G++ + K G D T+ TLI + GKI A + ++ + G
Sbjct: 295 EAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHK 354
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
Y +I G+C+ G + AF
Sbjct: 355 PFPSLYAPIIKGMCRNG-----------------------------------MFDDAFSF 379
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+S+M K PN Y+ LI G+ A L EM + P + ++ D L
Sbjct: 380 FSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKN 439
Query: 281 EGKVREAKNMLAVMIKQ 297
G K+ LA+ I+Q
Sbjct: 440 GG-----KHDLAMRIEQ 451
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 90 KPSLV-TMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL 148
KP L T N LI+ Y G++N A ++ + +LK G DT+TF T+I HG + A
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 149 QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
+ +G + +Y L++ G+ AALE R+I+ G+ PD V + ++ L
Sbjct: 361 SLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
C+ K+V+ + +EM I + + ++ + G + QA L + L +
Sbjct: 421 CQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST 480
Query: 269 YTYTILVDALGKEGKVREAKNML-AVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
T ++D ++G EA+ + G + DV+ YN ++ Y KA +F
Sbjct: 481 -TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFK 539
Query: 328 AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M +G PD +YN + L + + DEA +LAEM
Sbjct: 540 GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEM 576
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 6/276 (2%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGILKR---GYQPDTITFTTLIKGLCLHGKIQRAL 148
S T+ +I+ Y G A +V G KR G + D + + +IK ++AL
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETVFYG--KRNMSGQRNDVLEYNVMIKAYGKAKLHEKAL 535
Query: 149 QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
+ QG ++ +Y +L L + A +L + G KP Y +I S
Sbjct: 536 SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY 595
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
+ L+S A DLY M G+ PN V Y +LI GF G +++AI M + +
Sbjct: 596 VRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNH 655
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
T L+ A K G + EA+ + M PDV NS++ + V++A+ +FNA
Sbjct: 656 IVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNA 715
Query: 329 MSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ ++G T DV S+ ++ + M DEA+ + EM
Sbjct: 716 LREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEM 750
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 139/329 (42%), Gaps = 10/329 (3%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + F+ ML+ FN ++ + H S A SL +ME GI P T NIL+
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILL 382
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + G I +A I K G PDT+T ++ LC + ++
Sbjct: 383 SLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIR 442
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT----IIDSLCKDKLVSH 216
+++ S ++ G A L R Q D V+ +T +ID + L
Sbjct: 443 IDEHSVPVIMQMYVNEGLVVQAKALFERFQ-----LDCVLSSTTLAAVIDVYAEKGLWVE 497
Query: 217 AFD-LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A Y + G +V+ Y+ +I + ++A+ L M + PD TY L
Sbjct: 498 AETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLF 557
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
L V EA+ +LA M+ G KP TY +++ Y + ++ A D++ AM + G
Sbjct: 558 QMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVK 617
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
P+ Y +ING + M +EA+ M
Sbjct: 618 PNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 1/278 (0%)
Query: 87 TGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQR 146
+G + ++ N++I Y A S+ G+ +G PD T+ +L + L +
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 147 ALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIID 206
A + ++L G +Y +I +LG S A++L ++ G+KP+ V+Y ++I+
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 207 SLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP 266
+ +V A + M G+ N + ++LI + VG L++A + D+M P
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP 688
Query: 267 DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
DV ++ G V EA+++ + ++G DV+++ ++M Y + +++A +V
Sbjct: 689 DVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVA 747
Query: 327 NAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M + G D S+N ++ E L EM
Sbjct: 748 EEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 141/305 (46%), Gaps = 2/305 (0%)
Query: 58 IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLA 117
+ E+N ++ + K K + A+SL M+ G P T N L + ++ A +LA
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+L G +P T+ +I G + A+ ++ + G N+V YG+LING + G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
A++ R ++ G++ + ++ ++I + K + A +Y +M P+V +
Sbjct: 635 MVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASN 694
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
+++ +G + +A + + + K DV ++ ++ G + EA + M +
Sbjct: 695 SMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRES 753
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM-SQRGETPDVHSYNIIINGLCKIKMADE 356
G+ D ++N +M Y ++++ ++F+ M +R D ++ + L K + E
Sbjct: 754 GLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSE 813
Query: 357 ALNLL 361
A++ L
Sbjct: 814 AVSQL 818
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 118/255 (46%), Gaps = 3/255 (1%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+S F M + P +N + L A + +M +G KP T +I
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y LG ++ A + + K G +P+ + + +LI G G ++ A+Q+ + G
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD-KLVSHAFDL 220
N + +LI K+G A + +++ PDV N+++ SLC D +VS A +
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAESI 712
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
++ + KG +V++++ ++Y + +G L +AI + +EM + D ++ ++
Sbjct: 713 FNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAA 771
Query: 281 EGKVREAKNMLAVMI 295
+G++ E + M+
Sbjct: 772 DGQLSECCELFHEML 786
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 121/288 (42%), Gaps = 8/288 (2%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+++M P + N +L+ S A S+ + + G +++ ++ Y
Sbjct: 678 YDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKG 736
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ-FHDDVLAQGFLLNQV 164
+G ++ A V + + G D +F ++ G++ + FH+ ++ + LL+
Sbjct: 737 MGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWG 796
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKP--DVVMYNTIIDSLCKDKLVSHAFDLYS 222
++ TL L K G S A+ L+ KP + T+ ++ L ++A +
Sbjct: 797 TFKTLFTLLKKGGVPSEAVSQLQTAYNEA-KPLATPAITATLFSAM---GLYAYALESCQ 852
Query: 223 EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
E+ + I Y+A+IY + G + A+ M K ++PD+ T LV GK G
Sbjct: 853 ELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAG 912
Query: 283 KVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
V K + + + ++P + ++ D Y N + A V MS
Sbjct: 913 MVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEMS 960
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 151/361 (41%), Gaps = 40/361 (11%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D S N + ++ P + + V+ L K A ++ ME G++P++ + +I
Sbjct: 530 DLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSII 589
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
G++ A A +L+ G QPD I + +I +G+I A + ++V+
Sbjct: 590 GSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLR 649
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ +Y LI+G K+G + L ++ G+ P+VV+Y +I K +F L
Sbjct: 650 PSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTL 709
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL------------------- 261
+ M I + + Y L+ G K+ ++ E G
Sbjct: 710 FGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSS 769
Query: 262 ------------------KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
K+I P++Y + ++ G++ EA N L M K+G+ P++
Sbjct: 770 LGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNL 829
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
VTY LM + ++ A D+F + PD Y+ ++ GLC K +AL L+ E
Sbjct: 830 VTYTILMKSHIEAGDIESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALMLE 886
Query: 364 M 364
M
Sbjct: 887 M 887
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 156/357 (43%), Gaps = 37/357 (10%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+S +M+ + TP F +N V+ L + SL + ++ P + T I++N
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C ++AF+++ + + G +P ++++I L G++ A + +L G
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
++++Y +IN + G A EL+ + ++P Y +I K ++
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYL 675
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL--- 278
+M+ G+SPNVV Y+ALI F G K + L MG +I D Y L+ L
Sbjct: 676 DKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRA 735
Query: 279 -------------GKEG---KVREAKNMLAV------------------MIKQGVKPDVV 304
GKE ++ K ++++ +K+ + P++
Sbjct: 736 MARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLY 795
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
+N+++ GYC +++A + +M + G P++ +Y I++ + + A++L
Sbjct: 796 LHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 3/315 (0%)
Query: 39 PGDAISHFN-RMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
PG A + +N R++ P + ++ LVK + + A + ++ +G PS + +
Sbjct: 111 PGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSS 170
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
++++ C+ + AF + +RG L KGLC HG + A+ D +
Sbjct: 171 LVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGM 230
Query: 158 GFLLNQVS-YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+ V+ Y +L CK G + A L ++ G D VMY ++ CKD ++
Sbjct: 231 TRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTM 290
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A LY MV + + ++ LI+GF +G L + + +M K + +V+TY I++
Sbjct: 291 AMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIG 350
Query: 277 ALGKEGKVREAKNMLAVMI-KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
+ KEG V A + + + +V Y +L+ G+ ++KA D+ M G
Sbjct: 351 SYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIV 410
Query: 336 PDVHSYNIIINGLCK 350
PD +Y +++ L K
Sbjct: 411 PDHITYFVLLKMLPK 425
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 137/338 (40%), Gaps = 37/338 (10%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
V T+L ++Y A+S +M G P + N +I C I S++ I +
Sbjct: 483 VTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELD 542
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
+ PD T+ ++ LC A D + G Y ++I L K G A
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
E ++ GI+PD + Y +I++ ++ + A +L E+V + P+ TY+ LI GF
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
+G +++ LD+M + P+V YT L+ K+G + + + +M + +K D
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDH 722
Query: 304 VTYNSLMDGYCLVNEVNKAQDVF--------------------------------NAMSQ 331
+ Y +L+ G K + V AM
Sbjct: 723 IAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEV 782
Query: 332 RGET-----PDVHSYNIIINGLCKIKMADEALNLLAEM 364
G+ P+++ +N II G C DEA N L M
Sbjct: 783 IGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESM 820
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 130/295 (44%), Gaps = 2/295 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A +H +R++ P + V+ L + A Q++ G L L
Sbjct: 149 EARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLF 208
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTIT-FTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
C G +N A +L + P + + +L C G A D + G+
Sbjct: 209 KGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGY 268
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+++V Y L+ CK + A+ L R+ R + D ++NT+I K ++
Sbjct: 269 YVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRV 328
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLL-DEMGLKNIDPDVYTYTILVDAL 278
++S+M+ KG+ NV TY +I +C G + A+ L + G ++I +V+ YT L+
Sbjct: 329 MFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGF 388
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
K+G + +A ++L M+ G+ PD +TY L+ +E+ A + ++ G
Sbjct: 389 YKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 126/257 (49%)
Query: 94 VTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDD 153
V + ++ C +A S + ++ G P ++ ++IK L I+ +
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 154 VLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
+ F+ + +Y ++N LCK + AA ++ ++ G++P V +Y++II SL K
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTI 273
V A + +++M+ GI P+ + Y +I + G++ +A L++E+ + P +TYT+
Sbjct: 598 VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657
Query: 274 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
L+ K G + + L M++ G+ P+VV Y +L+ + + + +F M +
Sbjct: 658 LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEND 717
Query: 334 ETPDVHSYNIIINGLCK 350
D +Y +++GL +
Sbjct: 718 IKHDHIAYITLLSGLWR 734
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
G +K+ P+ T+I G C G++ A + + +G + N V+Y L+ + G
Sbjct: 784 GKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAG 843
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
+ +A++L +G +PD VMY+T++ LC K A L EM GI+PN +Y
Sbjct: 844 DIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYE 900
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
L+ C +A+ ++ +M +I P +T L+ L +E K+REA+ + A+M++
Sbjct: 901 KLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQS 960
Query: 298 G 298
G
Sbjct: 961 G 961
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 14/327 (4%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+ + HF R P F + +++ VK +M G+ P++V LI
Sbjct: 642 EVVKHFLR-------PSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ G +F++ + + + D I + TL+ GL ++ Q + + L
Sbjct: 695 GHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLL 754
Query: 161 LNQVSYGTLIN---GLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ L++ L G S A+E++ +++ + I P++ ++NTII C + A
Sbjct: 755 QRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEA 813
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
++ M +GI PN+VTY+ L+ G ++ AI L + N +PD Y+ L+
Sbjct: 814 YNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKG 870
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L + +A ++ M K G+ P+ +Y L+ C +A V M+ P
Sbjct: 871 LCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPR 930
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
++ +I LC+ K EA L A M
Sbjct: 931 SINHTWLIYILCEEKKLREARALFAIM 957
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 154/355 (43%), Gaps = 42/355 (11%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F++M++ +F ++ ++ S K + A+ L + TG + ++ N+ +CY +
Sbjct: 330 FSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF--VNNTGSED--ISRNV--HCYTN 383
Query: 106 L-------GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
L G ++ A +L +L G PD IT+ L+K L +++ A+ +L G
Sbjct: 384 LIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Query: 159 FLLN-----------------------------QVSYGTLINGLCKLGETSAALELLRRI 189
+N V + LC AAL + ++
Sbjct: 444 CGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKM 503
Query: 190 QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL 249
G P YN++I L ++ ++ L + + P+V TY ++ C
Sbjct: 504 VNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR 563
Query: 250 KQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
A ++D M + P V Y+ ++ +LGK+G+V EA+ A M++ G++PD + Y +
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ Y +++A ++ + + P +Y ++I+G K+ M ++ L +M
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKM 678
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 3/209 (1%)
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
L C+C G A ++ + GY D + +T L+K C + A++ + ++ +
Sbjct: 243 LFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERS 302
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
F L+ + TLI+G KLG + ++ +G++ +V Y+ +I S CK+ V +A
Sbjct: 303 FELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYAL 362
Query: 219 DLY-SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L+ + ++ IS NV Y+ LI+GF G + +A+ LL M I PD TY +L+
Sbjct: 363 RLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKM 422
Query: 278 LGKEGKVREAKNMLAVMIKQ--GVKPDVV 304
L K +++ A +L ++ G+ P V+
Sbjct: 423 LPKCHELKYAMVILQSILDNGCGINPPVI 451
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 2/244 (0%)
Query: 123 GYQPDTITFTTLIKGLCLHGKIQRALQFHDD-VLAQGFLLNQVSYGTLINGLCKLGETSA 181
G + D+ + LI+ L G+ A F++ V+ G + + +++ L KL
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
A L RI G P + ++D LC AF + ++ +G + L
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 242 GFCIVGQLKQAIGLLDEM-GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G C G L +AIG+LD + G+ + V Y L K G EA+ + M G
Sbjct: 210 GLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYY 269
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
D V Y LM YC N + A ++ M +R D +N +I+G K+ M D+ +
Sbjct: 270 VDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVM 329
Query: 361 LAEM 364
++M
Sbjct: 330 FSQM 333
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%)
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
S+L I ++ + + LC AL + ++ G SY ++I L
Sbjct: 463 SLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCL 522
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
+ L+ IQ PDV Y +++ LCK AF + M G+ P V
Sbjct: 523 FQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTV 582
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
YS++I G++ +A +M I PD Y I+++ + G++ EA ++
Sbjct: 583 AIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEE 642
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
++K ++P TY L+ G+ + + K + M + G +P+V Y +I K
Sbjct: 643 VVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLK 699
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 3/175 (1%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P ++ N ++T A + M+ GI P+LVT IL+ + G I SA +
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
G +PD + ++TL+KGLC + AL ++ G N+ SY L+ LC
Sbjct: 852 FEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCY 908
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS 230
T A+++++ + I P + + +I LC++K + A L++ MV G S
Sbjct: 909 SRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRS 963
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 3/301 (0%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
+ S V+ + AI L + E G+K S + N L+ C C +++A SV K+G
Sbjct: 192 AMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKG 249
Query: 124 YQP-DTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAA 182
P D+ ++ +I G G+++ + +++ GF + +SY LI GL + G + +
Sbjct: 250 NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDS 309
Query: 183 LELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYG 242
+E+ I+ +G PD +YN +I + + + Y M+ + PN+ TYS L+ G
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 243 FCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD 302
++ A+ + +EM + + P T + L G A + K G +
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRIS 429
Query: 303 VVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLA 362
Y L+ + +V++ M + G DV Y I++GLC I + A+ ++
Sbjct: 430 ESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVME 489
Query: 363 E 363
E
Sbjct: 490 E 490
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 135/288 (46%), Gaps = 1/288 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
FN +L L + H S A S+ + + I + NI+I+ + LG++ VL ++
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNAKK-GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G+ PD ++++ LI+GL G+I +++ D++ +G + + Y +I +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
++ RR+ +P++ Y+ ++ L K + VS A +++ EM+++G+ P ++ +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
C G A+ + + Y +L+ L + GK N+ M + G
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYP 462
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
DV Y ++DG C++ + A V ++G P+ Y+ + + L
Sbjct: 463 SDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKL 510
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 143/327 (43%), Gaps = 3/327 (0%)
Query: 40 GDA-ISHFNRMLQMPS-TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
G+A ++ F+ ++ P T + ++ +L +L + K +S + + M G+ P L +
Sbjct: 131 GEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLT 190
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
I ++ + + + A + G + T +F L++ LC + A +
Sbjct: 191 IAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKG 249
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ SY +I+G KLGE ++L+ + G PD + Y+ +I+ L + ++ +
Sbjct: 250 NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDS 309
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+++ + KG P+ Y+A+I F +++ M + +P++ TY+ LV
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L K KV +A + M+ +GV P S + C + A ++ + G
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRIS 429
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+Y +++ L + LN+ EM
Sbjct: 430 ESAYKLLLKRLSRFGKCGMLLNVWDEM 456
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 90/199 (45%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D++ F+ + + P +N ++ + + + + ++ +M +P+L T + L+
Sbjct: 308 DSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV 367
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +++ A + +L RG P T T+ +K LC +G A+ + G
Sbjct: 368 SGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCR 427
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+++ +Y L+ L + G+ L + +Q G DV +Y I+D LC + +A +
Sbjct: 428 ISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLV 487
Query: 221 YSEMVAKGISPNVVTYSAL 239
E + KG PN YS L
Sbjct: 488 MEEAMRKGFCPNRFVYSRL 506
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 87/196 (44%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+++ ++ RML P + ++K+++ L+K + S A+ + +M G+ P+ + +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C G ++A + K G + + L+K L GK L D++ G+
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYP 462
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ Y +++GLC +G A+ ++ +G P+ +Y+ + L A+ L
Sbjct: 463 SDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKL 522
Query: 221 YSEMVAKGISPNVVTY 236
+ ++ + N ++
Sbjct: 523 FLKIKKARATENARSF 538
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 146/313 (46%), Gaps = 6/313 (1%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
STP +F+ ++ K ++ + ++ G S++T+N LI+ Y +I+
Sbjct: 162 STPLVFDL--LVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIH-YSSKSKIDDLV 218
Query: 114 SVL--AGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLIN 171
+ I KR Y P+ IT +I+ LC G+++ + D + + L + + +L+
Sbjct: 219 WRIYECAIDKRIY-PNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVF 277
Query: 172 GLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP 231
+ + ++ LL+R+ + + D + Y+ ++ + K+ + A ++ EM+ +G S
Sbjct: 278 RVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSA 337
Query: 232 NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNML 291
N Y+ + C G +K+A LL EM + P T+ L+ + G +
Sbjct: 338 NSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYC 397
Query: 292 AVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
VM+ +G+ P +N ++ + VN+A ++ +G PD H+Y+ +I G +
Sbjct: 398 EVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEG 457
Query: 352 KMADEALNLLAEM 364
D+AL L EM
Sbjct: 458 NDIDQALKLFYEM 470
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 130/278 (46%), Gaps = 3/278 (1%)
Query: 89 IKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL 148
I P+ +T+ I+I C G++ +L I + P I T+L+ + +I+ ++
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 149 QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
+L + +++ + Y ++ K G+ +A ++ + RG + +Y +
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
C+ V A L SEM G+SP T++ LI GF G ++ + + M + + P
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSC 409
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
+ +V ++ K V A +L I +G PD TY+ L+ G+ N++++A +F
Sbjct: 410 SAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYE 469
Query: 329 MSQRGETPDVHSYNIIINGLC---KIKMADEALNLLAE 363
M R +P + +I GLC K++ ++ L ++ +
Sbjct: 470 MEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKK 507
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%)
Query: 107 GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY 166
G + SA V +L+RG+ ++ +T ++ C G ++ A + ++ G ++
Sbjct: 318 GDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETF 377
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
LI G + G LE + RG+ P +N ++ S+ K + V+ A ++ ++ +
Sbjct: 378 NCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSID 437
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
KG P+ TYS LI GF + QA+ L EM + + P + L+ L GKV
Sbjct: 438 KGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEA 497
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
+ L +M K+ ++P+ Y++L+ + + + A V+N M
Sbjct: 498 GEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 110/255 (43%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+++S R+L ++ V+ + K +A + +M G + + +
Sbjct: 287 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 346
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C G + A +L+ + + G P TF LI G G ++ L++ + ++ +G +
Sbjct: 347 RVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ ++ ++ + K+ + A E+L + +G PD Y+ +I + + A L
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 466
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ EM + +SP + +LI G C G+++ L M + I+P+ Y L+ A K
Sbjct: 467 FYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQK 526
Query: 281 EGKVREAKNMLAVMI 295
G A + MI
Sbjct: 527 IGDKTNADRVYNEMI 541
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
G+ PS N ++ + +N A +L + +G+ PD T++ LI+G I +A
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 148 LQFHDDV----LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
L+ ++ ++ GF + + +LI GLC G+ A + L+ ++ R I+P+ +Y+
Sbjct: 464 LKLFYEMEYRKMSPGFEV----FRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDA 519
Query: 204 IIDSLCKDKLVSHAFDLYSEMVA 226
+I + K ++A +Y+EM++
Sbjct: 520 LIKAFQKIGDKTNADRVYNEMIS 542
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGR-GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
S+ L++ + A++ + + + GI PD+V YNT+I +LC+ + ++ E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGK 283
+ G P++++++ L+ F + + D M KN+ P++ +Y V L + K
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 284 VREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNI 343
+A N++ VM +G+ PDV TYN+L+ Y + N + + +N M ++G TPD +Y +
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 344 IINGLCKIKMADEALNLLAE 363
+I LCK D A+ + E
Sbjct: 339 LIPLLCKKGDLDRAVEVSEE 358
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 139/303 (45%), Gaps = 3/303 (0%)
Query: 61 FNKVLTSLVKTKHYSTAIS-LSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
++ + L + K +ST L +Q +F IK + I++ Y + G A + +
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIML-LYGYSGMAEHAHKLFDEM 148
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ-GFLLNQVSYGTLINGLCKLGE 178
+ + +F L+ K+ A++ ++ + G + V+Y T+I LC+ G
Sbjct: 149 PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGS 208
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
L + ++ G +PD++ +NT+++ + +L ++ M +K +SPN+ +Y++
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNS 268
Query: 239 LIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG 298
+ G + A+ L+D M + I PDV+TY L+ A + + E M ++G
Sbjct: 269 RVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG 328
Query: 299 VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
+ PD VTY L+ C ++++A +V + + Y ++ L DEA
Sbjct: 329 LTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEAT 388
Query: 359 NLL 361
L+
Sbjct: 389 QLV 391
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 35/237 (14%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP + +N ++ +L + +S+ ++E G +P L++ N L+ +
Sbjct: 190 TPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDR 249
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ + + P+ ++ + ++GL R +F D
Sbjct: 250 IWDLMKSKNLSPNIRSYNSRVRGLT------RNKKFTD---------------------- 281
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
AL L+ ++ GI PDV YN +I + D + Y+EM KG++P+ V
Sbjct: 282 -------ALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTV 334
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNML 291
TY LI C G L +A+ + +E + Y +V+ L GK+ EA ++
Sbjct: 335 TYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
+P I +N + L + K ++ A++L M+ GI P + T N LI Y +
Sbjct: 260 SPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMK 319
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ ++G PDT+T+ LI LC G + RA++ ++ + L Y ++ L
Sbjct: 320 CYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLM 379
Query: 175 KLGETSAALELLR 187
G+ A +L++
Sbjct: 380 GAGKIDEATQLVK 392
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 6/254 (2%)
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKRG------YQPDTITFTTLIKGLCLHGKIQRAL 148
+ NI I+ + G +++A S+ + +R + PD T+ +LI LCL GK + AL
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 149 QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
D++ G + +Y LI G CK A+ + +Q G PD ++YN ++D
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGT 369
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
K + V+ A L+ +MV +G+ + TY+ LI G G+ + L ++ K D
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 429
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
T++I+ L +EGK+ A ++ M +G D+VT +SL+ G+ + + +
Sbjct: 430 ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKH 489
Query: 329 MSQRGETPDVHSYN 342
+ + P+V +N
Sbjct: 490 IREGNLVPNVLRWN 503
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 125/251 (49%), Gaps = 3/251 (1%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF 150
P + T N LI+ C G+ A V + G++PD T+ LI+G C ++ A++
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
+ ++ GF+ + + Y L++G K + + A +L ++ G++ YN +ID L +
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
+ F L+ ++ KG + +T+S + C G+L+ A+ L++EM + D+ T
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQG-VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
+ L+ K+G+ + K L I++G + P+V+ +N+ ++ L +K +D
Sbjct: 467 ISSLLIGFHKQGRW-DWKEKLMKHIREGNLVPNVLRWNAGVEA-SLKRPQSKDKDYTPMF 524
Query: 330 SQRGETPDVHS 340
+G D+ S
Sbjct: 525 PSKGSFLDIMS 535
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 143/327 (43%), Gaps = 30/327 (9%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTG--IKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
+L SL+++ + +A+ + ME G + PS+ ++ H ++ A S+L +L+
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKH--ELRLALSILFKLLE 190
Query: 122 RG---------------YQPDTITFTTLIKGLC---LHGKIQRALQFHDDVLAQGFLLNQ 163
Y P T+ L+ GL + + +R + + + F +
Sbjct: 191 ASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGM--KRFKFDT 248
Query: 164 VSYGTLINGLCKLGETSAALELLRRIQ------GRGIKPDVVMYNTIIDSLCKDKLVSHA 217
SY I+G G+ AAL L + ++ G PD+ YN++I LC A
Sbjct: 249 WSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDA 308
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
++ E+ G P+ TY LI G C ++ A+ + EM PD Y L+D
Sbjct: 309 LIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDG 368
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
K KV EA + M+++GV+ TYN L+DG +F + ++G+ D
Sbjct: 369 TLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVD 428
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+++I+ LC+ + A+ L+ EM
Sbjct: 429 AITFSIVGLQLCREGKLEGAVKLVEEM 455
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 22/326 (6%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
++++ ++ +T L M+ G+ IL++ G+ SA VL +
Sbjct: 95 YSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYME 154
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQF----------HDD-----VLAQGFLLNQVS 165
+ G + + +++ L +++ AL H D V+ +L V+
Sbjct: 155 ELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVA 214
Query: 166 YGTLINGLCKLGETSAALELLRRIQG-RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
L+ GL + S + +++G + K D YN I + A L+ EM
Sbjct: 215 VNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEM 274
Query: 225 VAKG------ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+ P++ TY++LI+ C+ G+ K A+ + DE+ + +PD TY IL+
Sbjct: 275 KERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGC 334
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
K ++ +A + M G PD + YN L+DG +V +A +F M Q G
Sbjct: 335 CKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASC 394
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
+YNI+I+GL + A+ L ++
Sbjct: 395 WTYNILIDGLFRNGRAEAGFTLFCDL 420
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 130/289 (44%), Gaps = 7/289 (2%)
Query: 42 AISHFNRMLQMPST------PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVT 95
A+S F M + S P I +N ++ L A+ + +++ +G +P T
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
ILI C +++ A + + G+ PDTI + L+ G K+ A Q + ++
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
+G + +Y LI+GL + G A L ++ +G D + ++ + LC++ +
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
A L EM +G S ++VT S+L+ GF G+ L+ + N+ P+V + V
Sbjct: 447 GAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV 506
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQD 324
+A K + ++ K+ + +G D+++ D EV+ +D
Sbjct: 507 EASLKRPQSKD-KDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMED 554
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 137/324 (42%), Gaps = 24/324 (7%)
Query: 61 FNKVLTSLVKTKHYSTAISL---------SHQMEFTG------IKPSLVTMNILINCYCH 105
++ VL +LVK A+S+ +H + TG P V +N L+
Sbjct: 165 YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELL-VGLR 223
Query: 106 LGQINSAFSVLAGILK--RGYQPDTITFTTLIKGLCLHGKIQRALQFHDD------VLAQ 157
+ S F + LK + ++ DT ++ I G G + AL + V
Sbjct: 224 RADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGS 283
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
F + +Y +LI+ LC G+ AL + ++ G +PD Y +I CK + A
Sbjct: 284 SFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDA 343
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+Y EM G P+ + Y+ L+ G ++ +A L ++M + + +TY IL+D
Sbjct: 344 MRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDG 403
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L + G+ + + K+G D +T++ + C ++ A + M RG + D
Sbjct: 404 LFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVD 463
Query: 338 VHSYNIIINGLCKIKMADEALNLL 361
+ + + ++ G K D L+
Sbjct: 464 LVTISSLLIGFHKQGRWDWKEKLM 487
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 156/350 (44%), Gaps = 26/350 (7%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA+ + M P +N +L +K + + A L +M G++ S T NILI
Sbjct: 342 DAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILI 401
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ G+ + F++ + K+G D ITF+ + LC GK++ A++ +++ +GF
Sbjct: 402 DGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFS 461
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS-----LCKDKLVS 215
++ V+ +L+ G K G +L++ I+ + P+V+ +N +++ KDK +
Sbjct: 462 VDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYT 521
Query: 216 HAF-------DLYSEMVAK--GISPNVVT------YSALIYGFCIVGQLKQAIGLLDEMG 260
F D+ S + ++ G S V+ +S+ Y + Q Q L
Sbjct: 522 PMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLAR 581
Query: 261 LKNID--PDVYTYTILVDALG---KEGKVREAKNMLAVMIKQGVKP-DVVTYNSLMDGYC 314
+ ++ PD + ++ L +G + A + + GV TYNS+M +
Sbjct: 582 GQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFV 641
Query: 315 LVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
A+ V + M + D+ +YN+II GL K+ AD A +L +
Sbjct: 642 KKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP-NVVTYSALIYGFCI 245
+R++ + DV M NT + +S A L+ G++ TY++++ F
Sbjct: 583 QRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVK 642
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G + A G+LD+M D+ TY +++ LGK G+ A +L + KQG D+V
Sbjct: 643 KGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVM 702
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
YN+L++ +++A +F+ M G PDV SYN +I K EA L M
Sbjct: 703 YNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAM 761
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 96 MNILINCYCHLGQINSA---FSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHD 152
MN ++ Y G ++ A F + G+ + T+ +++ G Q A D
Sbjct: 597 MNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLT--SYTYNSMMSSFVKKGYFQTARGVLD 654
Query: 153 DVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDK 212
+ + +Y +I GL K+G A +L R+ +G D+VMYNT+I++L K
Sbjct: 655 QMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKAT 714
Query: 213 LVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYT 272
+ A L+ M + GI+P+VV+Y+ +I G+LK+A L M P+ T T
Sbjct: 715 RLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDT 774
Query: 273 ILVDALGKE 281
IL D LGKE
Sbjct: 775 IL-DYLGKE 782
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%)
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDV 154
T N +++ + G +A VL + + D T+ +I+GL G+ A D +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
QG L+ V Y TLIN L K A +L ++ GI PDVV YNT+I+ K +
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIY 241
A+ M+ G PN VT + L Y
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTILDY 778
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 177 GETSAALELLRRIQGRGIKP-DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVT 235
G+ S A +L G G+ YN+++ S K A + +M + ++ T
Sbjct: 608 GDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIAT 667
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
Y+ +I G +G+ A +LD + + D+ Y L++ALGK ++ EA + M
Sbjct: 668 YNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMK 727
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
G+ PDVV+YN++++ ++ +A AM G P+ H + I++ L K
Sbjct: 728 SNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN-HVTDTILDYLGK 781
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Query: 59 FEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAG 118
+ +N +++S VK ++ TA + QM + T N++I +G+ + A +VL
Sbjct: 631 YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
+ K+G D + + TLI L ++ A Q D + + G + VSY T+I K G+
Sbjct: 691 LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
A + L+ + G P+ V +TI+D L K+
Sbjct: 751 LKEAYKYLKAMLDAGCLPNHVT-DTILDYLGKE 782
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 157/360 (43%), Gaps = 79/360 (21%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N +L+S K + AI L +ME G+KP +VT N L++ Y G A +VL +
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 121 KRGYQPDTITFTTLIK----------GLCLHGKIQRALQFHD--------DV-LAQGFL- 160
G +P T + ++L++ G +HG I R ++D D+ + G+L
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 161 -----------LNQVSYGTLINGL---CKLGETSAALELLRRIQGRGIKPDVVMYNTIID 206
N V++ +L++GL C L + A L+ R++ GIKPD + +N++
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEA---LMIRMEKEGIKPDAITWNSLAS 334
Query: 207 SLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP 266
A D+ +M KG++PNVV+++A+ G G + A+ + +M + + P
Sbjct: 335 GYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGP 394
Query: 267 -----------------------------------DVYTYTILVDALGKEGKVREAKNML 291
D Y T LVD GK G ++
Sbjct: 395 NAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQS----- 449
Query: 292 AVMIKQGVK-PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
A+ I G+K + ++N ++ GY + + F+ M + G PD ++ +++ +CK
Sbjct: 450 AIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS-VCK 508
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 151/380 (39%), Gaps = 106/380 (27%)
Query: 51 QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQIN 110
+MP + +N+++ +++ ++ A+ L +M+F+G K TM L+ Q+
Sbjct: 48 EMPKRDDL-AWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLL-------QVC 99
Query: 111 SAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLI 170
S K G+ +G +HG + R L +V ++
Sbjct: 100 SN--------KEGFA----------EGRQIHGYVLR-LGLESNV-------------SMC 127
Query: 171 NGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS 230
N L + + LEL R++ ++ +N+I+ S K V A L EM G+
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 231 PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP------------------------ 266
P++VT+++L+ G+ G K AI +L M + + P
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 267 -----------DVYTYTILVDALGKEG---------KVREAKNMLAV------------- 293
DVY T L+D K G + +AKN++A
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 294 ---------MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
M K+G+KPD +T+NSL GY + + KA DV M ++G P+V S+ I
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 345 INGLCKIKMADEALNLLAEM 364
+G K AL + +M
Sbjct: 368 FSGCSKNGNFRNALKVFIKM 387
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 136/308 (44%), Gaps = 10/308 (3%)
Query: 46 FNRML-QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYC 104
+ RM+ M I +N +++ L A +L +ME GIKP +T N L + Y
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYA 337
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
LG+ A V+ + ++G P+ +++T + G +G + AL+ + +G N
Sbjct: 338 TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAA 397
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+ TL+ L L + E+ + + D + ++D K + A +++ +
Sbjct: 398 TMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGI 457
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
K ++ +++ ++ G+ + G+ ++ I M ++PD T+T ++ G V
Sbjct: 458 KNKSLA----SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLV 513
Query: 285 REAKNMLAVM-IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNI 343
+E +M + G+ P + + ++D +++A D MS + PD +
Sbjct: 514 QEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK---PDATIWGA 570
Query: 344 IINGLCKI 351
++ CKI
Sbjct: 571 FLSS-CKI 577
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 115/286 (40%), Gaps = 35/286 (12%)
Query: 75 STAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTL 134
+ AI + M G PS + N ++N + + K G + D L
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 135 IKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGI 194
IKGLC G ++ ALQ D+ Q N +++ LI G C G+ A +LL R++ I
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI 268
Query: 195 KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIG 254
+PD + +N +I L K V DL M KG PN TY ++Y G
Sbjct: 269 EPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLY------------G 316
Query: 255 LLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC 314
LLD+ +N+ EAK M++ MI G++P ++Y ++ G C
Sbjct: 317 LLDKK--RNL---------------------EAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
Query: 315 LVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
V + V M G P + ++ + D NL
Sbjct: 354 ETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQANL 399
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 36/267 (13%)
Query: 99 LINCYCHL-GQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
L+ Y +L G+IN A +L G+ G P + +F
Sbjct: 137 LMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFN------------------------- 171
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
F+LN + L + + K+ ++ L G++ D N +I LC+ + A
Sbjct: 172 -FILNLLVSAKLFDEIHKIFVSAPKL---------GVEIDACCLNILIKGLCESGNLEAA 221
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L E + PNV+T+S LI GFC G+ ++A LL+ M + I+PD T+ IL+
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
L K+G+V E ++L M +G +P+ TY ++ G +A+++ + M G P
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPS 341
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
SY ++ GLC+ K E +L +M
Sbjct: 342 FLSYKKMVLGLCETKSVVEMDWVLRQM 368
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 108/227 (47%), Gaps = 7/227 (3%)
Query: 40 GDAISHFNRMLQ----MPS---TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPS 92
G+ NR ++ MP P FN +L LV K + + G++
Sbjct: 142 GNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEID 201
Query: 93 LVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHD 152
+NILI C G + +A +L ++ +P+ +TF+ LI+G C GK + A + +
Sbjct: 202 ACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLE 261
Query: 153 DVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDK 212
+ + + +++ LI+GL K G ++LL R++ +G +P+ Y ++ L K
Sbjct: 262 RMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKK 321
Query: 213 LVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
A ++ S+M++ G+ P+ ++Y ++ G C + + +L +M
Sbjct: 322 RNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQM 368
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
N ++ L ++ + A+ L + +P+++T + LI +C+ G+ AF +L + K
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
+PDTITF LI GL G+++ + + + +G N +Y ++ GL
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
A E++ ++ G++P + Y ++ LC+ K V + +MV G P + + ++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 242 GFCIVGQ 248
C+V +
Sbjct: 386 --CVVSK 390
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ + Q S P + F+ ++ + A L +ME I+P +T NILI+
Sbjct: 221 ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILIS 280
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
G++ +L + +G +P+ T+ ++ GL + A + +++ G
Sbjct: 281 GLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
Query: 162 NQVSYGTLINGLCKLGETSAALEL---LRRIQGRGIKPDVVMYNTII 205
+ +SY ++ GLC ET + +E+ LR++ G P +M+ ++
Sbjct: 341 SFLSYKKMVLGLC---ETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 14/235 (5%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH 151
+ ++ L+ C G + A + + + +PD + T+I LC G ++A
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 152 DDVLAQGFLL--NQVSYGTLINGLCKLGETSAALELLRRIQG-----------RGIKPDV 198
D + GF + +Y LI+ C+ G + + +RR RG PDV
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 199 VMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 258
V YN +ID CK + A +L+ +M KG PN VTY++ I + + +++ AI ++
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRT 343
Query: 259 M-GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
M L + P TYT L+ AL + + EA++++ M++ G+ P TY + D
Sbjct: 344 MKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 17/220 (7%)
Query: 144 IQRALQFHDDVLAQ-GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYN 202
+Q+AL+F + GF N+++ + L K + + LR++ R +VV
Sbjct: 107 LQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTA 166
Query: 203 TI---IDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+I + L ++ V A + M P+V Y+ +I C VG K+A LLD+M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 260 GLKNID--PDVYTYTILVDALGKEG-----------KVREAKNMLAVMIKQGVKPDVVTY 306
L PD YTYTIL+ + + G ++ EA M M+ +G PDVVTY
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
N L+DG C N + +A ++F M +G P+ +YN I
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIR 326
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 14/238 (5%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG--YQPDTITFTTL 134
A++ ++M+ KP + N +IN C +G A +L + G Y PDT T+T L
Sbjct: 184 ALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTIL 243
Query: 135 IKGLCLHG-----------KIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
I C +G ++ A + ++L +GF+ + V+Y LI+G CK AL
Sbjct: 244 ISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRAL 303
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS-PNVVTYSALIYG 242
EL ++ +G P+ V YN+ I + A ++ M G P TY+ LI+
Sbjct: 304 ELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHA 363
Query: 243 FCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
+ +A L+ EM + P YTY ++ DAL EG L +++G++
Sbjct: 364 LVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQ 421
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
++ S L+ L + G AL R++ KPDV YNTII++LC+ A
Sbjct: 162 VVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARF 221
Query: 220 LYSEMVAKGIS--PNVVTYSALIYGFCIVG-----------QLKQAIGLLDEMGLKNIDP 266
L +M G P+ TY+ LI +C G ++ +A + EM + P
Sbjct: 222 LLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVP 281
Query: 267 DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
DV TY L+D K ++ A + M +G P+ VTYNS + Y + NE+ A ++
Sbjct: 282 DVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMM 341
Query: 327 NAMSQRGE-TPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M + G P +Y +I+ L + + A EA +L+ EM
Sbjct: 342 RTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEM 380
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 17/249 (6%)
Query: 128 TITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLR 187
T + T L+K L G ++ AL + + +Y T+IN LC++G A LL
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 188 RIQGRGIK--PDVVMYNTIIDSLCK-----------DKLVSHAFDLYSEMVAKGISPNVV 234
++Q G + PD Y +I S C+ + + A ++ EM+ +G P+VV
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
TY+ LI G C ++ +A+ L ++M K P+ TY + ++ A M+ M
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Query: 295 IKQGVK-PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
K G P TY L+ +A+D+ M + G P ++Y ++ + L +
Sbjct: 345 KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGL 404
Query: 354 A---DEALN 359
A DE L+
Sbjct: 405 ASTLDEELH 413
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 95/178 (53%)
Query: 110 NSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTL 169
+SA L ++ G P T + L K LC H K ++ ++ + ++G+ SY +
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 170 INGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGI 229
I+ LCK G + L+ ++ G+ PDV +YN +I++ CK +++ A L+ EM +G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 230 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
N+ TY+ LI G+ ++++ L D+M + I+PD Y L++ L KE K+ A
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 139/335 (41%), Gaps = 35/335 (10%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
+L SL K A + ++ KP + ++ + G + VL K G
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLG 288
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQ-----------FHDDVL--------------AQG 158
P + + I L ++ A + +D+L A
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVE 348
Query: 159 FLLNQVSYGTL---------INGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
FL+ VS G L LC+ ++ ++ + +G ++ Y+ +I LC
Sbjct: 349 FLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLC 408
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
K V ++ EM +G++P+V Y+ALI C ++ A L DEM ++ ++
Sbjct: 409 KAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLT 468
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
TY +L+ L +EG+ E+ + M+++G++PD Y SL++G C ++ A +VF
Sbjct: 469 TYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKC 528
Query: 330 SQRG-ETPDVHSYNIIINGLCKIKMADEALNLLAE 363
+R +T + + LC + EA LL E
Sbjct: 529 MERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 5/224 (2%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
+P A+ M+ P I +K+ +L + I + G L + +
Sbjct: 342 DPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYS 401
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
++I+ C G++ +++ L + K G PD + LI+ C I+ A + D++ +
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G +N +Y LI L + GE +L L ++ RGI+PD +Y ++I+ LCK+ + A
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Query: 218 FDLYS---EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 258
+++ E K ++ V+ S + C G +A LL E
Sbjct: 522 MEVFRKCMERDHKTVTRRVL--SEFVLNLCSNGHSGEASQLLRE 563
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 11/272 (4%)
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
++++ C + AF +L + +PD + + + + + G +
Sbjct: 228 LILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKL 287
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL-----CKDK 212
G Y I L + A E+ I + M N I+D+L D
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVI----VSGKFPMDNDILDALIGSVSAVDP 343
Query: 213 LVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYT 272
+ F +Y MV+ G P + T S L C + I + + K ++ +Y+
Sbjct: 344 DSAVEFLVY--MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYS 401
Query: 273 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR 332
+++ L K G+VRE+ L M K+G+ PDV YN+L++ C + A+ +++ M
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 333 GETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
G ++ +YN++I L + A+E+L L +M
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKM 493
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 17/307 (5%)
Query: 60 EFNKVLTSLVKTKHYSTAISLS-HQMEFT-GIKPSLVTMNI---LINCYC-HLGQINSAF 113
E KV S + +S I S H + F I PSLV I L+N + LG N A
Sbjct: 14 ELLKVSGSSRAARIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAA 73
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
+ GY D+I++ ++ K L L + V + LL+ Y +LI+ L
Sbjct: 74 Q------QPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTL 127
Query: 174 CKLGETSAALELLRRI--QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP 231
+ +A +L G+ I PDV N ++ L D +A L+ +M KG+S
Sbjct: 128 VLGRKAQSAFWVLEEAFSTGQEIHPDVC--NRLLAGLTSDGCYDYAQKLFVKMRHKGVSL 185
Query: 232 NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV-DALGKEGKVREAKNM 290
N + + I FC + Q + L+DE+ N++ + +L+ +L K + +A +
Sbjct: 186 NTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYI 245
Query: 291 LAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
L + KPD + Y + + + + + + Q V + G P Y I L
Sbjct: 246 LEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLIS 305
Query: 351 IKMADEA 357
K EA
Sbjct: 306 AKRLTEA 312
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 133/359 (37%), Gaps = 36/359 (10%)
Query: 42 AISHFNRMLQMPS-TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
A+ FN Q P + ++ + SL ++ +S +L Q++ I LI
Sbjct: 65 ALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLI 124
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ + SAF VL G + L+ GL G A + + +G
Sbjct: 125 DTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVS 184
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPD-VVMYNTIIDSLCKDKLVSHAFD 219
LN + +G I C+ ET+ L L+ ++ + + ++ I+ SLCK AF
Sbjct: 185 LNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFY 244
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+ E+ P+ + Y + F + G L + +L + + P Y + L
Sbjct: 245 ILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLI 304
Query: 280 KEGKVREAKNM----------------------------------LAVMIKQGVKPDVVT 305
++ EAK + L M+ G P + T
Sbjct: 305 SAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRT 364
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ L C ++ + + +S +G ++ SY+++I+ LCK E+ L EM
Sbjct: 365 LSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEM 423
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 37/313 (11%)
Query: 89 IKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL 148
+ P++ T N+L++ I A VL + + G D +TTLI GK+
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 149 QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
+ + G N ++G LI+G + G+ + A ++ + +KPD V++N +I +
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 209 CKDKLVSHAFDLYSEMVAKG--ISPNVVTYSALIYGFCIVGQLKQ--------------- 251
+ V AFD+ +EM A+ I P+ ++ AL+ C GQ+++
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 252 --------------------AIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNML 291
A + +M K++ PD ++ L+D G + EA +L
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 292 AVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
QG++ ++Y+SLM C + KA +++ + P + + N +I LC+
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEG 762
Query: 352 KMADEALNLLAEM 364
+A+ L E+
Sbjct: 763 NQLPKAMEYLDEI 775
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 89 IKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGY--QPDTITFTTLIKGLCLHGKIQR 146
+KP V N LI+ G ++ AF VLA + + PD I+ L+K C G+++R
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 147 ALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIID 206
A + + + G Y +N K G+ A + + ++ + + PD V ++ +ID
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Query: 207 SLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP 266
K++ AF + + ++GI ++YS+L+ C K+A+ L +++ + P
Sbjct: 688 VAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRP 747
Query: 267 DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
+ T L+ AL + ++ +A L + G+KP+ +TY+ LM
Sbjct: 748 TISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 15/265 (5%)
Query: 107 GQINSAFSVLAGILKRGY-QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV- 164
G+I S+L + +R D I + K ++ A +F +LN
Sbjct: 414 GRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRF------TKLILNPTM 467
Query: 165 -SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
++ L++ + A +LR +Q G+ D +Y T+I S K V F+++ +
Sbjct: 468 STFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQ 527
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGK 283
M G+ N+ T+ ALI G GQ+ +A G + KN+ PD + L+ A G+ G
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA 587
Query: 284 VREAKNMLAVMIKQG--VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG--ETPDVH 339
V A ++LA M + + PD ++ +LM C +V +A++V+ + + G TP+V
Sbjct: 588 VDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV- 646
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
Y I +N K D A ++ +M
Sbjct: 647 -YTIAVNSCSKSGDWDFACSIYKDM 670
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQM--EFTGIKPSLVTMNILINCYCHLGQINSAFSVLAG 118
FN ++++ ++ A + +M E I P +++ L+ C+ GQ+ A V
Sbjct: 575 FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQM 634
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
I K G + +T + G A + D+ + ++V + LI+
Sbjct: 635 IHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKM 694
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
A +L+ + +GI+ + Y++++ + C K A +LY ++ + + P + T +A
Sbjct: 695 LDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNA 754
Query: 239 LIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG 298
LI C QL +A+ LDE+ + P+ TY++L+ A ++ + +L+ G
Sbjct: 755 LITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDG 814
Query: 299 VKPDVV 304
V P+++
Sbjct: 815 VSPNLI 820
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A S + M + TP F+ ++ K A + + GI+ ++ + L+
Sbjct: 663 ACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMG 722
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
C+ A + I +P T LI LC ++ +A+++ D++ G
Sbjct: 723 ACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKP 782
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
N ++Y L+ + + + +LL + +G G+ P+++M I SLCK +
Sbjct: 783 NTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCIT-SLCKRRF 833
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 142/300 (47%), Gaps = 3/300 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N + SL + + ++ +M G++ +T + +I C N A +
Sbjct: 189 YNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMY 248
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
K G PD +T++ ++ GK++ L ++ +A G+ + +++ L + G+
Sbjct: 249 KTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYD 308
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
+L+ ++ +KP+VV+YNT+++++ + A L++EM+ G++PN T +AL+
Sbjct: 309 GIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALV 368
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV- 299
+ + A+ L +EM K D Y L++ G EA+ + M K+ V
Sbjct: 369 KIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM-KESVQ 427
Query: 300 -KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
+PD +Y ++++ Y + KA ++F M + G +V ++ L K K D+ +
Sbjct: 428 CRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVV 487
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%)
Query: 127 DTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELL 186
+TI + +K L + Q + +++ G L+ ++Y T+I + + A+E
Sbjct: 185 ETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWF 244
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIV 246
R+ G+ PD V Y+ I+D K V LY VA G P+ + +S L F
Sbjct: 245 ERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEA 304
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
G +L EM ++ P+V Y L++A+G+ GK A+++ M++ G+ P+ T
Sbjct: 305 GDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTL 364
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+L+ Y A ++ M + D YN ++N I + +EA L +M
Sbjct: 365 TALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM 422
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 142/322 (44%), Gaps = 4/322 (1%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI F RM + P ++ +L K+ +SL + TG KP + ++L
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ G + VL + +P+ + + TL++ + GK A +++L G
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD-KLVSHAFDL 220
N+ + L+ K AL+L ++ + D ++YNT+++ +C D L A L
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MCADIGLEEEAERL 418
Query: 221 YSEMVAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+++M P+ +Y+A++ + G+ ++A+ L +EM + +V T LV LG
Sbjct: 419 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLG 478
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
K ++ + + + IK+GVKPD L+ L A+ V + +R V
Sbjct: 479 KAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACL-ERANKKLVT 537
Query: 340 SYNIIINGLCKIKMADEALNLL 361
N+I++ + + E L+
Sbjct: 538 FVNLIVDEKTEYETVKEEFKLV 559
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 144/308 (46%), Gaps = 21/308 (6%)
Query: 60 EFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL---INCYCHLGQINSAFSVL 116
+F+++ L++TK ++ I P TM ++ + C + Q +F
Sbjct: 123 KFDQIWELLIETKRKDRSL----------ISPR--TMQVVLGRVAKLCSVRQTVESFWKF 170
Query: 117 AGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKL 176
++ + DT F L++ LC + A + L F + ++ L++G
Sbjct: 171 KRLVPDFF--DTACFNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNILLSGWKSS 227
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTY 236
E A E ++ G+G+KPDVV YN++ID CKD+ + A+ L +M + +P+V+TY
Sbjct: 228 EEAEAFFEEMK---GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITY 284
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
+ +I G ++GQ +A +L EM PDV Y + ++ +A ++ M+K
Sbjct: 285 TTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVK 344
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADE 356
+G+ P+ TYN L N++ ++ +++ M P+ S +I + + D
Sbjct: 345 KGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDM 404
Query: 357 ALNLLAEM 364
A+ L +M
Sbjct: 405 AMRLWEDM 412
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 12/327 (3%)
Query: 41 DAISHFNRMLQMPSTPPIFE---FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
++ F R++ P F+ FN +L +L + K + A ++ H ++ +P L T N
Sbjct: 165 ESFWKFKRLV-----PDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFN 218
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
IL++ + + + F + G +G +PD +T+ +LI C +I++A + D + +
Sbjct: 219 ILLSGWKSSEEAEAFFEEMKG---KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREE 275
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
+ ++Y T+I GL +G+ A E+L+ ++ G PDV YN I + C + + A
Sbjct: 276 EETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDA 335
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L EMV KG+SPN TY+ + L ++ L M P+ + L+
Sbjct: 336 DKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKM 395
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
+ KV A + M+ +G + + L+D C + +V +A+ M ++G P
Sbjct: 396 FKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPS 455
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
S+ I + DE NL+ +M
Sbjct: 456 NVSFKRIKLLMELANKHDEVNNLIQKM 482
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 155/343 (45%), Gaps = 25/343 (7%)
Query: 39 PGDAISHFNRMLQ-MPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
P A+ H+ + P P I F ++ LV + A+ + M G ++
Sbjct: 181 PEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGF-----VVD 235
Query: 98 ILINCYCHLGQINSAFSVLAGILK---------RGYQPDTITFTTLIKGLCLHGKIQRAL 148
++ Y +G + + S G+LK G+ D + + L+KG + + A+
Sbjct: 236 PVVYSYLMMGCVKN--SDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAM 293
Query: 149 QFHDDVLAQG--FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP-----DVVMY 201
+ +++ + + ++ ++Y ++ L + G+ AL+L ++ P ++ +
Sbjct: 294 ECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTF 353
Query: 202 NTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL 261
N +++ C A +++ +M SP+ ++++ L+ C L +A L EM
Sbjct: 354 NVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEE 413
Query: 262 KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
KN+ PD YTY +L+D KEGK+ E M++ ++P++ YN L D +++
Sbjct: 414 KNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDD 473
Query: 322 AQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
A+ F+ M + + D +Y I+ L + DE L ++ EM
Sbjct: 474 AKSFFDMMVSKLKMDD-EAYKFIMRALSEAGRLDEMLKIVDEM 515
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 21/285 (7%)
Query: 94 VTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDD 153
V N++I + G +N A ++ + G PD IT+T++I G C GKI A + +
Sbjct: 166 VAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKE 225
Query: 154 VLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQ----GRGIKPDVVMYNTIIDSLC 209
+ +LN V+Y ++ G+CK G+ ALELL ++ G I P+ V Y +I + C
Sbjct: 226 MSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFC 285
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI----VGQLKQAIGLLDEMGLKNID 265
+ + V A + M +G PN VT LI G V L + I L ++G ++
Sbjct: 286 EKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLS 345
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
+ T+ +L + + EA+ + +M+ +GV+PD + + + CL + + D
Sbjct: 346 ECFSSATV---SLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCL---LERYLDC 399
Query: 326 FNAMSQRGETPDVHS------YNIIINGLCKIKMADEALNLLAEM 364
F + Q E DV S + +++ GLC+ + EA L M
Sbjct: 400 F-LLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSM 443
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
AL +LR+ + D V YN +I ++ A L EM G+ P+V+TY+++I
Sbjct: 149 ALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMIN 208
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG--- 298
G+C G++ A L EM + + TY+ +++ + K G + A +LA M K+
Sbjct: 209 GYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGG 268
Query: 299 -VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
+ P+ VTY ++ +C V +A V + M RG P+ + ++I G+
Sbjct: 269 LISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGV 319
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N V+ + A L +M+ G+ P ++T +IN YC+ G+I+ A+ + +
Sbjct: 168 YNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMS 227
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ--GFLL--NQVSYGTLINGLCKL 176
K +++T++ +++G+C G ++RAL+ ++ + G L+ N V+Y +I C+
Sbjct: 228 KHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEK 287
Query: 177 GETSAALELLRRIQGRGIKP-----------------DVVMYNTIID------------- 206
AL +L R+ RG P DV + +ID
Sbjct: 288 RRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSEC 347
Query: 207 ------SLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
SL + K A ++ M+ +G+ P+ + S + C++ + L E+
Sbjct: 348 FSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIE 407
Query: 261 LKN----IDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
K+ ID D+ + +L+ L ++G EA + M+ + ++ V
Sbjct: 408 KKDVKSTIDSDI--HAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKV 452
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 251 QAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
+A+ +L + N+ D Y +++ +G + A ++ M G+ PDV+TY S++
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 311 DGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+GYC +++ A + MS+ + +Y+ I+ G+CK + AL LLAEM
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEM 261
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 98/181 (54%), Gaps = 1/181 (0%)
Query: 184 ELLRRIQGR-GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYG 242
EL + G+ IKPD+V YNT+I +LC+ + A L E+ KG+ P++VT++ L+
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 243 FCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD 302
+ GQ + + +M KN+ D+ TY + L E K +E N+ + G+KPD
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 303 VVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLA 362
V ++N+++ G ++++A+ + + + G PD ++ +++ +CK + A+ L
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Query: 363 E 363
E
Sbjct: 345 E 345
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 1/249 (0%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFT-GIKPSLVTMNILINCYC 104
F M + FN +L++ +K + L +++ IKP +V+ N LI C
Sbjct: 132 FEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALC 191
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
+ A ++L I +G +PD +TF TL+ L G+ + + ++ + ++
Sbjct: 192 EKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIR 251
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y + GL ++ + L ++ G+KPDV +N +I + + A Y E+
Sbjct: 252 TYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEI 311
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
V G P+ T++ L+ C G + AI L E K T LVD L K K
Sbjct: 312 VKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKR 371
Query: 285 REAKNMLAV 293
EA+ ++ +
Sbjct: 372 EEAEEIVKI 380
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 40/260 (15%)
Query: 70 KTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYC---HLGQINSAFSVLAGILKRGYQP 126
K + A + +M K S+++ N L++ Y + F+ L G L +P
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL--SIKP 178
Query: 127 DTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELL 186
D +++ TLIK LC + A+ D++
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEI-------------------------------- 206
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIV 246
+ +G+KPD+V +NT++ S +++++MV K ++ ++ TY+A + G
Sbjct: 207 ---ENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANE 263
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
+ K+ + L E+ + PDV+++ ++ EGK+ EA+ ++K G +PD T+
Sbjct: 264 AKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATF 323
Query: 307 NSLMDGYCLVNEVNKAQDVF 326
L+ C + A ++F
Sbjct: 324 ALLLPAMCKAGDFESAIELF 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 204 IIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM-GLK 262
II K + +A ++ EM + +V++++AL+ + + + L +E+ G
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 263 NIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKA 322
+I PD+ +Y L+ AL ++ + EA +L + +G+KPD+VT+N+L+ L +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 323 QDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++++ M ++ D+ +YN + GL + E +NL E+
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL 276
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 6/250 (2%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEF-TGIKPSLVTMNILINCYCHLGQINSAFS 114
P FN ++ S + + +ME G P++ + N+L+ YC G ++ A
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
V + RG D + + T+I GLC + ++ +A + D+ +G ++Y L+NG C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDK---LVSHAFDLYSEMVAKGI-S 230
K G+ + L + R ++ +G + D + +++ LC D+ V A D+ + V + +
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 231 PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNM 290
P+ Y L+ C G++ +A+ + EM K P TY +D G G E +
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD-EETSAL 481
Query: 291 LAVMIKQGVK 300
LA+ + + +K
Sbjct: 482 LAIEMAESLK 491
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 5/235 (2%)
Query: 89 IKPSLVTMNILINCYCHLGQINSAFSVLAGILKR-GYQPDTITFTTLIKGLCLHGKIQRA 147
IKP+ T N ++ + G+ + + + G P+ ++ L++ C G + A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
+ +++ +G + + V+Y T+I GLC E A EL R + +GI+ + Y +++
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC--IVGQ--LKQAIGLLDEMGLKN 263
CK V +Y EM KG + +T AL+ G C GQ ++ A + D +
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAM 420
Query: 264 IDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE 318
P Y +LV L ++GK+ A N+ A M+ +G KP TY + +DGY +V +
Sbjct: 421 FYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD 475
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 146/327 (44%), Gaps = 32/327 (9%)
Query: 43 ISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINC 102
I +NR P F F+ ++ S + +K A+ + ++ GI + T N LI
Sbjct: 152 IKSYNRCGSAP-----FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITE 206
Query: 103 YCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLN 162
++ + + + + D ++ K + GKI+ N
Sbjct: 207 VSRRRGASNGYKMYREV----FGLDDVSVDEAKKMI---GKIK---------------PN 244
Query: 163 QVSYGTLINGLCKLGETSAALELLRRIQGR-GIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
++ +++ + GET + R ++ G P+V YN ++++ C L+S A ++
Sbjct: 245 ATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVW 304
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EM +G+ ++V Y+ +I G C ++ +A L +MGLK I+ TY LV+ K
Sbjct: 305 EEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKA 364
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE----VNKAQDVFNAMSQRGETPD 337
G V + M ++G + D +T +L++G C + V A V +A+ + P
Sbjct: 365 GDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPS 424
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+ Y +++ LC+ D ALN+ AEM
Sbjct: 425 RNCYELLVKRLCEDGKMDRALNIQAEM 451
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 4/210 (1%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
+P ++ +N ++ + S A + +M+ G+ +V N +I C ++ A
Sbjct: 278 SPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKE 337
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ + +G + +T+ L+ G C G + L + ++ +GF + ++ L+ GLC
Sbjct: 338 LFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC 397
Query: 175 KLGETSAALE----LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS 230
+ +E + ++ P Y ++ LC+D + A ++ +EMV KG
Sbjct: 398 DDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFK 457
Query: 231 PNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
P+ TY A I G+ IVG + + L EM
Sbjct: 458 PSQETYRAFIDGYGIVGDEETSALLAIEMA 487
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 7/268 (2%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
NIL+ +C ++ A S+ + R + PD T L+ G G + F+ +++
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII--DSLCKDKL 213
+GF N V+YG I+G CK AL L + V + T+I + ++K+
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTI 273
A L+ E+ +G++P+ Y+AL+ G + AI ++ EM K I+PD T+
Sbjct: 298 --KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHS 355
Query: 274 LVDAL--GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
+ + KE M ++ + P T LM +C EVN D++ M +
Sbjct: 356 MFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLE 415
Query: 332 RGETPDVHSYNIIINGLCKIKMADEALN 359
+G P H+ ++ LC + A++A
Sbjct: 416 KGYCPHGHALELLTTALCARRRANDAFE 443
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 12/251 (4%)
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK-------IQRALQFHDDVLAQGFLL 161
+ A++++A + R P+ ++F ++ LC K ++ ++ ++ + F +
Sbjct: 119 FDQAWALMAEV--RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGV 176
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
++ + L+ C E A + ++ R PDV N ++ + V+ Y
Sbjct: 177 DE--FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFY 233
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
EMV +G PN VTY I GFC +A+ L ++M + D V T L+ G
Sbjct: 234 HEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVA 293
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
+A+ + + K+G+ PD YN+LM +V+ A V M ++G PD ++
Sbjct: 294 RNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
Query: 342 NIIINGLCKIK 352
+ + G+ K K
Sbjct: 354 HSMFIGMMKSK 364
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 115/266 (43%), Gaps = 40/266 (15%)
Query: 60 EFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
EFN +L + + A S+ ++ + P + TMNIL+ + G + + +
Sbjct: 178 EFNILLRAFCTEREMKEARSIFEKLH-SRFNPDVKTMNILLLGFKEAGDVTATELFYHEM 236
Query: 120 LKRGYQPDTITFTTLIKGLC------------------------------LHG------K 143
+KRG++P+++T+ I G C +HG K
Sbjct: 237 VKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNK 296
Query: 144 IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
I +A Q D++ +G + +Y L++ L K G+ S A+++++ ++ +GI+PD V +++
Sbjct: 297 I-KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHS 355
Query: 204 IIDSLCKDKLVSH--AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL 261
+ + K K + Y +M + + P T L+ FC G++ + L M
Sbjct: 356 MFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLE 415
Query: 262 KNIDPDVYTYTILVDALGKEGKVREA 287
K P + +L AL + +A
Sbjct: 416 KGYCPHGHALELLTTALCARRRANDA 441
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 3/207 (1%)
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPD--VVMYNTIIDSLCKDKLVSHA 217
LL+ S L+ + K G LE +++ + V +N ++ + C ++ + A
Sbjct: 136 LLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEA 195
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
++ ++ ++ +P+V T + L+ GF G + EM + P+ TY I +D
Sbjct: 196 RSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDG 254
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
K+ EA + M + V +L+ G + KA+ +F+ +S+RG TPD
Sbjct: 255 FCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPD 314
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+YN +++ L K A+ ++ EM
Sbjct: 315 CGAYNALMSSLMKCGDVSGAIKVMKEM 341
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 93/171 (54%)
Query: 193 GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQA 252
GI+PD+ YN +I C+ S ++ + +EM KGI PN ++ +I GF + +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 253 IGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
+L M + ++ V TY I + +L K K +EAK +L M+ G+KP+ VTY+ L+ G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 313 YCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
+C ++ +A+ +F M RG PD Y +I LCK + AL+L E
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKE 352
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 8/253 (3%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQM-EFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
N +L + + K Y A + +M + GI+P L T N +I +C G +S++S++A +
Sbjct: 154 LNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEM 213
Query: 120 LKRGYQPDTITFTTLIKGLCLHGK---IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKL 176
++G +P++ +F +I G K + + L D +G + +Y I LCK
Sbjct: 214 ERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKD---RGVNIGVSTYNIRIQSLCKR 270
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTY 236
++ A LL + G+KP+ V Y+ +I C + A L+ MV +G P+ Y
Sbjct: 271 KKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECY 330
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
LIY C G + A+ L E KN P LV+ L K+ KV EAK ++ +K
Sbjct: 331 FTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIG-QVK 389
Query: 297 QGVKPDVVTYNSL 309
+ +V +N +
Sbjct: 390 EKFTRNVELWNEV 402
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 123 GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAA 182
G +PD T+ +IK C G + ++ +G N S+G +I+G ++
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 183 LELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYG 242
++L ++ RG+ V YN I SLCK K A L M++ G+ PN VTYS LI+G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 243 FCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD 302
FC ++A L M + PD Y L+ L K G A ++ +++ P
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 303 VVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
SL++G ++V +A+++ + ++ T +V +N + L
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEKF-TRNVELWNEVEAAL 406
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 7/223 (3%)
Query: 50 LQMPS----TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
++MP P + +N+++ ++ S++ S+ +ME GIKP+ + ++I+ +
Sbjct: 175 IEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYA 234
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
+ + VLA + RG T+ I+ LC K + A D +L+ G N V+
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT 294
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
Y LI+G C + A +L + + RG KPD Y T+I LCK A L E +
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 226 AKGISPNVVTYSALIYGFC---IVGQLKQAIGLLDEMGLKNID 265
K P+ +L+ G V + K+ IG + E +N++
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVE 397
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%)
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y +I C+ G S++ ++ ++ +GIKP+ + +I + + + M
Sbjct: 189 TYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMM 248
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
+G++ V TY+ I C + K+A LLD M + P+ TY+ L+ E
Sbjct: 249 KDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDF 308
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
EAK + +M+ +G KPD Y +L+ C + A + ++ P +
Sbjct: 309 EEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSL 368
Query: 345 INGLCKIKMADEALNLLAEM 364
+NGL K +EA L+ ++
Sbjct: 369 VNGLAKDSKVEEAKELIGQV 388
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
++ Y +I+GLCK G+ A + + G++PDV YN +I + + A L
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKL 67
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y+EM+ +G+ P+ +TY+++I+G C +L QA + + T+ L++ K
Sbjct: 68 YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCK 118
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
+V++ N+ M ++G+ +V+TY +L+ G+ V + N A D+F M G +
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 341 YNIIINGLCKIKMADEALNLLAE 363
+ I+ LC K +A+ +L +
Sbjct: 179 FRDILPQLCSRKELRKAVAMLLQ 201
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
NI+I+ C G+ + A ++ +L G QPD T+ +I+ + RA + + +++
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLYAEMIR 73
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSH 216
+G + + ++Y ++I+GLCK + + Q R + +NT+I+ CK V
Sbjct: 74 RGLVPDTITYNSMIHGLCKQNKLA---------QARKVSKSCSTFNTLINGYCKATRVKD 124
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
+L+ EM +GI NV+TY+ LI+GF VG A+ + EM + T+ ++
Sbjct: 125 GMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILP 184
Query: 277 ALGKEGKVREAKNML 291
L ++R+A ML
Sbjct: 185 QLCSRKELRKAVAML 199
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 127 DTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELL 186
DT + +I GLC GK A ++L G + +Y +I + A +L
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIV 246
+ RG+ PD + YN++I LCK ++ A + +S + T++ LI G+C
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKA 119
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
++K + L EM + I +V TYT L+ + G A ++ M+ GV +T+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 307 NSLMDGYCLVNEVNKA 322
++ C E+ KA
Sbjct: 180 RDILPQLCSRKELRKA 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 197 DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 256
D YN II LCK A ++++ ++ G+ P+V TY+ +I L +A L
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLY 68
Query: 257 DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLV 316
EM + + PD TY ++ L K+ K+ +A+ V T+N+L++GYC
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNTLINGYCKA 119
Query: 317 NEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
V ++F M +RG +V +Y +I+G ++ + AL++ EM
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 17/147 (11%)
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV--DA 277
++ M + + Y+ +I+G C G+ +A + + + + PDV TY +++ +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
LG+ A+ + A MI++G+ PD +TYNS++ G C N++ +A+ V + S
Sbjct: 61 LGR------AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS------- 107
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
++N +ING CK + +NL EM
Sbjct: 108 --TFNTLINGYCKATRVKDGMNLFCEM 132
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 9/147 (6%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
G A + M++ P +N ++ L K + A +S S T N L
Sbjct: 62 GRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVS---------KSCSTFNTL 112
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
IN YC ++ ++ + +RG + IT+TTLI G G AL ++++ G
Sbjct: 113 INGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGV 172
Query: 160 LLNQVSYGTLINGLCKLGETSAALELL 186
+ +++ ++ LC E A+ +L
Sbjct: 173 YSSSITFRDILPQLCSRKELRKAVAML 199
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 125/294 (42%), Gaps = 2/294 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + K+ L K A L M G+KP++ LI+ Y ++ AFS
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 116 LAGILK-RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
L + +PD TFT LI C G+ ++ G + V+Y T+I+G
Sbjct: 202 LEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYG 261
Query: 175 KLGETSAALELLRRIQGRGIK-PDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
K G +L + G PDV N+II S + + YS G+ P++
Sbjct: 262 KAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDI 321
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
T++ LI F G K+ ++D M + TY I+++ GK G++ + ++
Sbjct: 322 TTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRK 381
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
M QGVKP+ +TY SL++ Y V K V + D +N IIN
Sbjct: 382 MKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINA 435
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 135/311 (43%), Gaps = 2/311 (0%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAIS-LSHQMEFTGIKPSLVTM 96
P A F ML P I + +++ K++ A S L + + KP + T
Sbjct: 159 QPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTF 218
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
+LI+C C LG+ + S++ + G T+T+ T+I G G + D++
Sbjct: 219 TVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIE 278
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALE-LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
G L V I G G +E R Q G++PD+ +N +I S K +
Sbjct: 279 DGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYK 338
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
+ M + S VTY+ +I F G++++ + +M + + P+ TY LV
Sbjct: 339 KMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLV 398
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
+A K G V + ++L ++ V D +N +++ Y ++ ++++ M +R
Sbjct: 399 NAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCK 458
Query: 336 PDVHSYNIIIN 346
PD ++ +I
Sbjct: 459 PDKITFATMIK 469
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 128/278 (46%), Gaps = 10/278 (3%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P +F F +++ K + S+ +M + G+ S VT N +I+ Y G SV
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 116 LAGILKRGYQ-PDTITFTTLIKGLCLHGKIQRALQ-FHDDVLAQGFLLNQVSYGTLINGL 173
LA +++ G PD T ++I G +G+ R ++ ++ G + ++ LI
Sbjct: 273 LADMIEDGDSLPDVCTLNSII-GSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSF 331
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
K G ++ ++ R V YN +I++ K + D++ +M +G+ PN
Sbjct: 332 GKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNS 391
Query: 234 VTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
+TY +L+ + G + + +L ++ ++ D + +++A G+ G + K +
Sbjct: 392 ITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQ 451
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
M ++ KPD +T+ +++ Y A +F+A+ +
Sbjct: 452 MEERKCKPDKITFATMIKTY-------TAHGIFDAVQE 482
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 7/218 (3%)
Query: 141 HGKIQRALQFHDDVLAQGFLLNQV-SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVV 199
+ Q AL+ + + Q + + +Y L L + A L + G+KP +
Sbjct: 121 ENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTID 180
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS---PNVVTYSALIYGFCIVGQLKQAIGLL 256
+Y ++I K +L+ AF M K +S P+V T++ LI C +G+ ++
Sbjct: 181 VYTSLISVYGKSELLDKAFSTLEYM--KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIV 238
Query: 257 DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK-PDVVTYNSLMDGYCL 315
EM + TY ++D GK G E +++LA MI+ G PDV T NS++ Y
Sbjct: 239 LEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGN 298
Query: 316 VNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKM 353
+ K + ++ G PD+ ++NI+I K M
Sbjct: 299 GRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGM 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 84/192 (43%)
Query: 44 SHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCY 103
S ++R M P I FN ++ S K Y S+ ME + VT NI+I +
Sbjct: 307 SWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETF 366
Query: 104 CHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ 163
G+I V + +G +P++IT+ +L+ G + + ++ +L+
Sbjct: 367 GKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDT 426
Query: 164 VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
+ +IN + G+ + EL +++ R KPD + + T+I + + +L +
Sbjct: 427 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQ 486
Query: 224 MVAKGISPNVVT 235
M++ I +T
Sbjct: 487 MISSDIGKKRLT 498
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 7/138 (5%)
Query: 231 PNVVTYSALIYGFCIVGQLKQ---AIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
P TY+ L F ++G KQ A L + M + + P + YT L+ GK + +A
Sbjct: 142 PRCKTYTKL---FKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKA 198
Query: 288 KNMLAVMIK-QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
+ L M KPDV T+ L+ C + + + + MS G +YN II+
Sbjct: 199 FSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIID 258
Query: 347 GLCKIKMADEALNLLAEM 364
G K M +E ++LA+M
Sbjct: 259 GYGKAGMFEEMESVLADM 276
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 153/336 (45%), Gaps = 12/336 (3%)
Query: 41 DAISHFNRMLQMPST-PPIFEFNKVLTSLVKTKHYSTAISL-SHQMEFTGIKPSLVTMNI 98
DA S R +T P +F N ++ ++ + K YS +ISL + + + I P++V+ N
Sbjct: 162 DAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQ 221
Query: 99 LINCYCHLGQINSAFSVLAGILKRG-YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+IN +C G ++ A V IL + P ++T+ L KGL G+I A ++L++
Sbjct: 222 IINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSK 281
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + Y LI G LG+ A+E ++ + D ++ T ++ + A
Sbjct: 282 GQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEA 341
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY-----TYT 272
+ Y ++ K + T + L+ F G+ +A L +EM + P++ T
Sbjct: 342 MESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVG 401
Query: 273 ILVDALGKEGKVREAKNML-AVMIKQGVKP---DVVTYNSLMDGYCLVNEVNKAQDVFNA 328
I+V+ K G+ EA N V K KP D + Y +++ +C + +A+ F
Sbjct: 402 IMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAE 461
Query: 329 MSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
R D S+ +I+ K + D+A+ +L M
Sbjct: 462 GVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRM 497
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 97/215 (45%), Gaps = 11/215 (5%)
Query: 95 TMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLH-----GKIQRAL- 148
T N+L+ + G+ + A+++ +L P+ ++ + G+ ++ G+ A+
Sbjct: 359 TGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAIN 418
Query: 149 ---QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII 205
+ V ++ F+++ + Y ++ C+ G + A R + D + +I
Sbjct: 419 TFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMI 478
Query: 206 DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIV-GQLKQAIGLLDEMGLKNI 264
D+ K + + A + MV + V + A ++G I G+L ++ +L +MG +
Sbjct: 479 DAYLKAERIDDAVKMLDRMVDVNLR-VVADFGARVFGELIKNGKLTESAEVLTKMGEREP 537
Query: 265 DPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
PD Y ++V L + +AK+++ MI+ V
Sbjct: 538 KPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNV 572
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK-----------IQRA 147
+IN Y +G +A V + +R + ++F L+ C++ K +
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNA-CVNSKKFDLVEGIFKELPGK 170
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII-D 206
L DV SY TLI GLC G + A+ L+ I+ +G+KPD + +N ++ +
Sbjct: 171 LSIEPDV---------ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHE 221
Query: 207 SLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP 266
S K K +++ MV K + ++ +Y+A + G + + ++ + L D++ + P
Sbjct: 222 SYTKGKF-EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKP 280
Query: 267 DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVF 326
DV+T+T ++ EGK+ EA + K G +P +NSL+ C ++ A ++
Sbjct: 281 DVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELC 340
Query: 327 NAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
+ + D +++ L K DEA
Sbjct: 341 KEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 1/199 (0%)
Query: 167 GTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
+IN ++G A ++ + R K + +N ++++ K ++ E+
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG 169
Query: 227 K-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
K I P+V +Y+ LI G C G +A+ L+DE+ K + PD T+ IL+ +GK
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
E + + A M+++ VK D+ +YN+ + G + N+ + +F+ + PDV ++ +I
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 346 NGLCKIKMADEALNLLAEM 364
G DEA+ E+
Sbjct: 290 KGFVSEGKLDEAITWYKEI 308
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 1/249 (0%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFT-GIKPSLVTMNILINCYC 104
F+ M + FN +L + V +K + + ++ I+P + + N LI C
Sbjct: 129 FDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLC 188
Query: 105 HLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQV 164
G A +++ I +G +PD ITF L+ GK + Q ++ + +
Sbjct: 189 GKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIR 248
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
SY + GL ++ + L +++G +KPDV + +I + + A Y E+
Sbjct: 249 SYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEI 308
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
G P +++L+ C G L+ A L E+ K + D +VDAL K K
Sbjct: 309 EKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQ 368
Query: 285 REAKNMLAV 293
EA+ ++ +
Sbjct: 369 DEAEEIVEL 377
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 142 GKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGR-GIKPDVVM 200
G + A + D++ + +S+ L+N + + + + G+ I+PDV
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 201 YNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
YNT+I LC + A L E+ KG+ P+ +T++ L++ G+ ++ + M
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN 320
KN+ D+ +Y + L E K E ++ + +KPDV T+ +++ G+ +++
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+A + + + G P +N ++ +CK + A L E+
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 154/381 (40%), Gaps = 75/381 (19%)
Query: 58 IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLA 117
+ +N +L L K + SL +M GIKP T LI+ Y G A L
Sbjct: 187 VIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLG 246
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH-----DDVLAQGFL-LNQVSYGTLIN 171
+ K G QPD +T +++ + Q+A +F D+ A + L+ +Y T+I+
Sbjct: 247 KMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMID 306
Query: 172 GLCKLGETSAALELLRRIQGRGIKPDVVMYNTII-------------------------D 206
K G+ A E +R+ GI P V +NT+I D
Sbjct: 307 TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPD 366
Query: 207 SLCKDKLVS---------HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 257
+ + L+S A + EM G+ P+ V+Y L+Y F I +++A GL+
Sbjct: 367 TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426
Query: 258 EMGLKNIDPDVYT----------------------------------YTILVDALGKEGK 283
EM N++ D YT Y+ +DA G+ G
Sbjct: 427 EMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGY 486
Query: 284 VREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNI 343
+ EA+ + + ++ K V+ YN ++ Y + KA ++F +M G TPD +YN
Sbjct: 487 LSEAERVF-ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT 545
Query: 344 IINGLCKIKMADEALNLLAEM 364
++ L M + L +M
Sbjct: 546 LVQILASADMPHKGRCYLEKM 566
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 163/396 (41%), Gaps = 74/396 (18%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVL------------TSLVKT---------KHYSTAIS 79
+A F RML+ P FN ++ TSL+KT + Y+ IS
Sbjct: 316 EASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILIS 375
Query: 80 LS-------------HQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQP 126
L +M+ G+KP V+ L+ + + A ++A + +
Sbjct: 376 LHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEI 435
Query: 127 DTITFTTLIKGLCLHGKIQRAL----QFH--DDVLAQGFLLNQVSYG------------- 167
D T + L + ++++ +FH ++ ++G+ N +YG
Sbjct: 436 DEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFI 495
Query: 168 --------TLIN--------GLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
T+I G+ K E A EL + G+ PD YNT++ L
Sbjct: 496 CCQEVNKRTVIEYNVMIKAYGISKSCE--KACELFESMMSYGVTPDKCTYNTLVQILASA 553
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTY 271
+ +M G + + Y A+I F +GQL A + EM NI+PDV Y
Sbjct: 554 DMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVY 613
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
+L++A G V++A + + M + G+ + V YNSL+ Y V +++A+ ++ + Q
Sbjct: 614 GVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Query: 332 ---RGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + PDV++ N +IN + M +A + M
Sbjct: 674 SCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM 709
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 136/310 (43%), Gaps = 4/310 (1%)
Query: 58 IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLA 117
+ E+N ++ + +K A L M G+ P T N L+ + L
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+ + GY D I + +I G++ A + + +++ + V YG LIN G
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA---KGISPNVV 234
A+ + ++ GI + V+YN++I K + A +Y +++ K P+V
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVY 684
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
T + +I + +++A + D M + + + +T+ +++ K G+ EA + M
Sbjct: 685 TSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMA 354
+ + D ++YNS++ + L +A + F M G PD ++ + L K+ M+
Sbjct: 744 REMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMS 803
Query: 355 DEALNLLAEM 364
+A+ + E+
Sbjct: 804 KKAVRKIEEI 813
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 116/271 (42%), Gaps = 4/271 (1%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A F M+ TP +N ++ L +M TG + +I+
Sbjct: 524 ACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVIS 583
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ LGQ+N A V +++ +PD + + LI G +Q+A+ + + + G
Sbjct: 584 SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPG 643
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIK---PDVVMYNTIIDSLCKDKLVSHAF 218
N V Y +LI K+G A + R++ K PDV N +I+ + +V A
Sbjct: 644 NSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAE 703
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
++ M +G N T++ ++ + G+ ++A + +M I D +Y ++
Sbjct: 704 AIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLF 762
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
+G+ +EA M+ G++PD T+ SL
Sbjct: 763 ALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
Y+ + I + +++ L K + D+++ +G +YGTLI+ K G AL
Sbjct: 183 YELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHAL 242
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM------VAKGISPNVVTYS 237
L ++ G++PD V ++ K + A + + + + + TY+
Sbjct: 243 CWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYN 302
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
+I + GQ+K+A M + I P T+ ++ G G++ E +++ M K
Sbjct: 303 TMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KL 361
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
PD TYN L+ + N++ +A F M G PD SY ++ M +EA
Sbjct: 362 HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEA 421
Query: 358 LNLLAEM 364
L+AEM
Sbjct: 422 EGLIAEM 428
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 100/222 (45%), Gaps = 4/222 (1%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
+ M++ P + + ++ + T + A+S M+ GI + V N LI Y
Sbjct: 598 YKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Query: 106 LGQINSAFSVLAGILK---RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLN 162
+G ++ A ++ +L+ + PD T +I +++A D + +G N
Sbjct: 658 VGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EAN 716
Query: 163 QVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYS 222
+ ++ ++ K G A ++ ++++ I D + YN+++ D A + +
Sbjct: 717 EFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFK 776
Query: 223 EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNI 264
EMV+ GI P+ T+ +L +G K+A+ ++E+ K I
Sbjct: 777 EMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 16/285 (5%)
Query: 86 FTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQ 145
F K + M ++++ Y + A + K + P F L+ LC HG I+
Sbjct: 182 FNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIE 241
Query: 146 RALQFHDDVLAQG--FLLNQVSYGTLINGLCKLG-ETSAALELLRRIQGRGIKPDVVMYN 202
+A +F +LA F ++ + ++NG C + + + A + R + I P+ Y+
Sbjct: 242 KAEEF---MLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYS 298
Query: 203 TIIDSLCKDKLVSHAFD---LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 259
+I K V + FD LY EM +G++P + Y++L+Y +A+ L+ ++
Sbjct: 299 HMISCFSK---VGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKL 355
Query: 260 GLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
+ + PD TY ++ L + GK+ A+N+LA MI + + P V T+++ ++ VN
Sbjct: 356 NEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEA---VN-F 411
Query: 320 NKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
K +V M P ++ +I+ L K K + AL + AEM
Sbjct: 412 EKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEM 456
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 4/208 (1%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP ++ +++ K + ++ L +M+ G+ P + N L+ + A
Sbjct: 291 TPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMK 350
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
++ + + G +PD++T+ ++I+ LC GK+ A +VLA N +
Sbjct: 351 LMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVA----RNVLATMISENLSPTVDTFHAFL 406
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
+ LE+L +++ + P + I+ L K K +A +++EM I N
Sbjct: 407 EAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPA 466
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLK 262
Y A I G G L++A + EM K
Sbjct: 467 LYLATIQGLLSCGWLEKAREIYSEMKSK 494
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 4/192 (2%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D++ ++ M + P I +N ++ L + + A+ L ++ G+KP VT N +I
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
C G+++ A +VLA ++ P TF ++ + ++ L+ +
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLG 427
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ ++ ++ L K + AL++ + I + +Y I L + A ++
Sbjct: 428 PTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREI 487
Query: 221 YSEMVAKGISPN 232
YSEM +KG N
Sbjct: 488 YSEMKSKGFVGN 499
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/245 (17%), Positives = 100/245 (40%), Gaps = 39/245 (15%)
Query: 89 IKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL 148
I P+ + + +I+C+ +G + + + + KRG P + +L+ L A+
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAM 349
Query: 149 QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
+ + +G + V+Y ++I LC+ G+ A +L
Sbjct: 350 KLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVL---------------------- 387
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDV 268
+ M+++ +SP V T+ A + ++ + +L +M + ++ P
Sbjct: 388 -------------ATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTE 430
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
T+ +++ L K + A + A M + + + Y + + G + KA+++++
Sbjct: 431 ETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSE 490
Query: 329 MSQRG 333
M +G
Sbjct: 491 MKSKG 495
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 136/302 (45%), Gaps = 15/302 (4%)
Query: 60 EFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGI 119
EFN VL L + K ++ L + T +I+ +G+ A + +
Sbjct: 105 EFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKIL 164
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRAL---QFHDDVLAQGFLLNQVS-YGTLINGLCK 175
K D T T +I LC G ++RAL H DV++ N++S Y +L+ G
Sbjct: 165 DKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISG----NELSVYRSLLFGWSV 220
Query: 176 LGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDK-------LVSHAFDLYSEMVAKG 228
A +++ ++ GI PD+ +N+++ LC+ LV A ++ EM +
Sbjct: 221 QRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYK 280
Query: 229 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
I P ++Y+ L+ +++++ +L++M DPD +Y +V L G+ +
Sbjct: 281 IQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGN 340
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
++ MI++G +P+ Y L+ C V VN A +F M + Y+++I L
Sbjct: 341 QIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKL 400
Query: 349 CK 350
CK
Sbjct: 401 CK 402
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Query: 55 TPPIFEFNKVLTSLVK-------TKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
TP +F FN +LT L + + A+++ +M I+P+ ++ NIL++C
Sbjct: 240 TPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTR 299
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
++ + +L + + G PDT ++ +++ L L G+ + Q D+++ +GF + Y
Sbjct: 300 RVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYY 359
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
LI LC + + AL+L +++ + +Y+ +I LCK +L+ E ++
Sbjct: 360 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALS 418
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 7/184 (3%)
Query: 82 HQMEFTGIKPSLVTMNILINCYCHL-------GQINSAFSVLAGILKRGYQPDTITFTTL 134
M+ GI P L N L+ C C G + A +++ + QP ++++ L
Sbjct: 232 QDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNIL 291
Query: 135 IKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGI 194
+ L +++ + Q + + G + SY ++ L G +++ + RG
Sbjct: 292 LSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 351
Query: 195 KPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIG 254
+P+ Y +I LC + V+ A L+ +M + Y LI C G ++
Sbjct: 352 RPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRE 411
Query: 255 LLDE 258
L +E
Sbjct: 412 LWEE 415
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 97/258 (37%), Gaps = 7/258 (2%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DAI F + + F ++++L H A+ + H + L L+
Sbjct: 156 DAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLL 215
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLH-------GKIQRALQFHDD 153
+ + A V+ + G PD F +L+ LC G + AL +
Sbjct: 216 FGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLE 275
Query: 154 VLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
+ + +SY L++ L + + ++L +++ G PD Y ++ L
Sbjct: 276 MRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGR 335
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTI 273
+ EM+ +G P Y LI C V ++ A+ L ++M ++ Y +
Sbjct: 336 FGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDL 395
Query: 274 LVDALGKEGKVREAKNML 291
L+ L K G + + +
Sbjct: 396 LIPKLCKGGNFEKGRELW 413
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 141/343 (41%), Gaps = 37/343 (10%)
Query: 58 IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLA 117
+F +N ++ L+K + + +M G+ P+ TMN + +C G ++ A +
Sbjct: 357 VFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYR 416
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+ G+ P +++ LI LC + +++A + +G L ++ TL N LC G
Sbjct: 417 SRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKG 476
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
+ A EL+ R + P + II +LC V A + G+ + ++
Sbjct: 477 KPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFT 536
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDP------------------------------- 266
+LIYG + + A L+ M K P
Sbjct: 537 SLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQL 596
Query: 267 -----DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
V Y + ++ G GK + A+ + +M + G+ P V + ++ Y ++
Sbjct: 597 SLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIAD 656
Query: 322 AQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
A F+ + ++G+T Y ++I GLCK D+A++ L EM
Sbjct: 657 ALHFFHDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHFLEEM 698
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 145/318 (45%), Gaps = 2/318 (0%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
A+ HF M F ++ +L +LV+ K + + + Q+ G + VT +IL+
Sbjct: 201 ALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCA-VTHSILVK 259
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+C G+++ A L +L L+ LC K Q A + D++ G +
Sbjct: 260 KFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVN 319
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQG-RGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+Y I L K G + + L++I G + +V YN+++ L K+ + +D+
Sbjct: 320 MDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDI 379
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+EM+ +G+SPN T +A + FC G + +A+ L P +Y L+ L
Sbjct: 380 LTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCA 439
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
V +A ++L I +G T+++L + C + + A+++ A ++R P +
Sbjct: 440 NESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIA 499
Query: 341 YNIIINGLCKIKMADEAL 358
II+ LC + ++AL
Sbjct: 500 GCKIISALCDVGKVEDAL 517
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 137/348 (39%), Gaps = 41/348 (11%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
+P N L K A+ L G P+ ++ N LI+ C + A+
Sbjct: 389 SPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYD 448
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
VL G + RG+ TF+TL LC GK A + + L +++ +I+ LC
Sbjct: 449 VLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALC 508
Query: 175 KLGETSAAL-----------------------------------ELLRRIQGRGIKPDVV 199
+G+ AL +L+ R+Q +G P
Sbjct: 509 DVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRS 568
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS---PNVVTYSALIYGFCIVGQLKQAIGLL 256
+Y +I +C+ + S + ++ ++ +S V Y+ I G G+ K A +
Sbjct: 569 LYRNVIQCVCE--MESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVY 626
Query: 257 DEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLV 316
D M I P V + +++ + K K+ +A + + +QG K Y ++ G C
Sbjct: 627 DMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKA 685
Query: 317 NEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
N+++ A M G P + Y + I LC + DEA+ L+ E
Sbjct: 686 NKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEF 733
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 122/292 (41%), Gaps = 20/292 (6%)
Query: 80 LSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLC 139
L + F + SL + L+ Y G+ + A + RG D+ + L+ L
Sbjct: 169 LDRSVGFESCRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALV 228
Query: 140 LHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRI---------Q 190
D + +GF+ V++ L+ CK G+ A + LR +
Sbjct: 229 EEKCFDSFDVIFDQISVRGFVC-AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGS 287
Query: 191 GRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLK 250
G GI ++D+LC + A L E+ G Y+ I G L
Sbjct: 288 GLGI---------LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLN 338
Query: 251 QAIGLLDEMG-LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
L ++ L+ + +V+ Y +V L KE + ++L M+ +GV P+ T N+
Sbjct: 339 NPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAA 398
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
+ +C V++A +++ + S+ G P SYN +I+ LC + ++A ++L
Sbjct: 399 LCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVL 450
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 120/294 (40%), Gaps = 1/294 (0%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK-R 122
++ +L + + A L +++ G NI I G +N+ L I
Sbjct: 292 LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLE 351
Query: 123 GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAA 182
G + + + +++ L + +++ +G N+ + + CK G A
Sbjct: 352 GCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEA 411
Query: 183 LELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYG 242
LEL R G P + YN +I +LC ++ V A+D+ + +G T+S L
Sbjct: 412 LELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNA 471
Query: 243 FCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD 302
C G+ A L+ +++ P ++ AL GKV +A + + K GV
Sbjct: 472 LCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTS 531
Query: 303 VVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADE 356
+ SL+ G + + A + M ++G TP Y +I +C+++ ++
Sbjct: 532 FKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEK 585
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 119/294 (40%), Gaps = 7/294 (2%)
Query: 76 TAISLSH--QMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTT 133
T I+L H M F G+ ++L+N +S + I RG+ +T +
Sbjct: 198 TDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVC-AVTHSI 256
Query: 134 LIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
L+K C GK+ A + +L G L++ LC + A +LL I+ G
Sbjct: 257 LVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVG 316
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA-KGISPNVVTYSALIYGFCIVGQLKQA 252
YN I +L K +++ D ++ +G V Y+++++ L
Sbjct: 317 TVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGV 376
Query: 253 IGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
+L EM ++ + P+ T + K G V EA + + G P ++YN L+
Sbjct: 377 YDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHT 436
Query: 313 YCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC---KIKMADEALNLLAE 363
C V +A DV RG +++ + N LC K MA E + AE
Sbjct: 437 LCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAE 490
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 10/220 (4%)
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G P + +++ + KI AL F D+ QG ++ Y +I GLCK +
Sbjct: 631 RDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLD 689
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A+ L ++G G++P + Y I LC ++ A L +E G + L+
Sbjct: 690 DAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLL 749
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNID---PDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
+ + +A ++NI+ P++ + L+ + L +I++
Sbjct: 750 HNAMKSKGVYEAW-----TRMRNIEDKIPEMKSLGELIGLFSGRIDMEVELKRLDEVIEK 804
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
D+ TYN L+ ++N+ A ++ +++RG P+
Sbjct: 805 CYPLDMYTYNMLLR-MIVMNQAEDAYEMVERIARRGYVPN 843
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 18/291 (6%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
F VL +L + ++ H M G ++ TMN + C + A V L
Sbjct: 149 FRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIK-L 207
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
K +PD IT+ T+I+G C G + A + + ++ +GF ++ + ++ L K +
Sbjct: 208 KEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFD 267
Query: 181 AALELLR-RIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A ++ + RG D Y +ID LCK+ + A ++ EM +G+ + +T+++L
Sbjct: 268 EASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASL 327
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
IYG + ++ +A GL++ G++N PD+ Y L+ L K + EA + MI++G
Sbjct: 328 IYGLLVKRRVVEAYGLVE--GVEN--PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGC 383
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
+P + TY L+ G+ ++G P V+ I + G+ K
Sbjct: 384 EPIMHTYLMLLQGH------------LGRRGRKGPDPLVNFDTIFVGGMIK 422
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 124/278 (44%), Gaps = 40/278 (14%)
Query: 124 YQPD-TITFTTLIKGLCLHGKIQRALQFHDDVLAQGF----LLNQVSYGTLINGLCKLGE 178
+ PD T T TT K L + G + F + LAQ L+N ++ ++ L E
Sbjct: 104 HHPDFTHTSTTSNKMLAIIGNSRNMDLFWE--LAQEIGKRGLVNDKTFRIVLKTLASARE 161
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
+ + G G +V N +++LCK+KLV A ++ ++ + I P+ +TY
Sbjct: 162 LKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL-KEFIKPDEITYRT 220
Query: 239 LIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI-KQ 297
+I GFC VG L +A L + M + D D+ +++ L K+ + EA + VM+ K+
Sbjct: 221 MIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKR 280
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG------------------------ 333
G D Y ++D C ++ A+ VF+ M +RG
Sbjct: 281 GGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEA 340
Query: 334 -------ETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
E PD+ Y+ +I GL KIK A EA + +M
Sbjct: 341 YGLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKM 378
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 9/270 (3%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK-IQRALQFHDDVL 155
+ LI Y N A + + G ++F L+ CLH K + Q D++
Sbjct: 106 STLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNA-CLHSKNFDKVPQLFDEIP 164
Query: 156 AQ--GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
+ + +++SYG LI C G A+E++R++QG+G++ + + TI+ SL K
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVG--QLKQAIGLLDEMGLKNIDPDVYTY 271
+ A +L++EMV KG + Y+ I ++K+ I + MGLK PD +Y
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLK---PDTISY 281
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
L+ A + G + EAK + + P+ T+ +L+ C + +F
Sbjct: 282 NYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVY 341
Query: 332 RGETPDVHSYNIIINGLCKIKMADEALNLL 361
+ PD ++ ++ GL + K D+A L+
Sbjct: 342 MHKIPDFNTLKHLVVGLVENKKRDDAKGLI 371
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 3/258 (1%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQM--EFTGIKPSLVTMNIL 99
A+ F +M Q + FN +L + + +K++ L ++ + I P ++ IL
Sbjct: 121 AMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGIL 180
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I YC G A ++ + +G + TI FTT++ L G+++ A ++++ +G
Sbjct: 181 IKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGC 240
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
L+ +Y I K EL+ + G+KPD + YN ++ + C+ ++ A
Sbjct: 241 ELDNAAYNVRIMSAQKESPERVK-ELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKK 299
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+Y + +PN T+ LI+ C +Q + + + PD T LV L
Sbjct: 300 VYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLV 359
Query: 280 KEGKVREAKNMLAVMIKQ 297
+ K +AK ++ + K+
Sbjct: 360 ENKKRDDAKGLIRTVKKK 377
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
++ ++ S + ++ A+ QM+ G S V+ N L+N H + + I
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 121 KRGYQ--PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
+R + PD I++ LIK C G ++A++ + +G + +++ T+++ L K GE
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
A L + +G + D YN I S K+ +L EM + G+ P+ ++Y+
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKES-PERVKELIEEMSSMGLKPDTISYNY 283
Query: 239 LIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
L+ +C G L +A + + + N P+ T+ L+
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKG------------------------------- 228
Y+T+I S + + +HA + +M G
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI 163
Query: 229 ------ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
I P+ ++Y LI +C G ++AI ++ +M K ++ +T ++ +L K+G
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 283 KVREAKNMLAVMIKQGVKPDVVTYN-SLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSY 341
++ A N+ M+K+G + D YN +M E + +++ MS G PD SY
Sbjct: 224 ELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPE--RVKELIEEMSSMGLKPDTISY 281
Query: 342 NIIINGLCKIKMADEA 357
N ++ C+ M DEA
Sbjct: 282 NYLMTAYCERGMLDEA 297
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 156/338 (46%), Gaps = 25/338 (7%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFT----GIKPSLVTM 96
+AI F ++ P + N +L LV+ + ++ L ++ G++ T
Sbjct: 126 EAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQ---SLELVPEILVKACRMGVRLEESTF 182
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQ--RALQFHDDV 154
ILI+ C +G+++ A ++ + + D ++ L+ +C H + + +D+
Sbjct: 183 GILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDL 242
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
F Y ++ L + G + +L +++ ++PD+V Y ++ + D+
Sbjct: 243 RKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDY 302
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
A L+ E++ G++P+V TY+ I G C ++ A+ ++ M +P+V TY IL
Sbjct: 303 PKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNIL 362
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKA----QDVFN--- 327
+ AL K G + AK + M GV + T++ ++ Y V+EV A ++ FN
Sbjct: 363 IKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNV 422
Query: 328 -AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
S R E +I+ LC+ + D+A+ LLA +
Sbjct: 423 FVKSSRIEE--------VISRLCEKGLMDQAVELLAHL 452
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 2/237 (0%)
Query: 61 FNKVLTSLVKTKHYST--AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAG 118
++++L+S+ K K S I + T P L +++ G+ SVL
Sbjct: 217 YSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQ 276
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
+ +PD + +T +++G+ +A + D++L G + +Y INGLCK +
Sbjct: 277 MKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQND 336
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
AL+++ + G +P+VV YN +I +L K +S A L+ EM G++ N T+
Sbjct: 337 IEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDI 396
Query: 239 LIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
+I + V ++ A GLL+E N+ ++ L ++G + +A +LA ++
Sbjct: 397 MISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+ +S N+M P + + VL ++ + Y A L ++ G+ P + T N+ I
Sbjct: 269 EVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYI 328
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
N C I A +++ + K G +P+ +T+ LIK L G + RA ++ G
Sbjct: 329 NGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVN 388
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
N ++ +I+ ++ E A LL + +I LC+ L+ A +L
Sbjct: 389 RNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVEL 448
Query: 221 YSEMV 225
+ +V
Sbjct: 449 LAHLV 453
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 77/133 (57%)
Query: 164 VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
++Y ++I+G CK A +L + +G PDVV ++T+I+ CK K V + +++ E
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGK 283
M +GI N VTY+ LI+GFC VG L A LL+EM + PD T+ ++ L + +
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 284 VREAKNMLAVMIK 296
+R+A +L + K
Sbjct: 131 LRKAFAILEDLQK 143
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 78/141 (55%)
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGK 283
M+ I P +TY+++I GFC ++ A +LD M K PDV T++ L++ K +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 284 VREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNI 343
V + M ++G+ + VTY +L+ G+C V +++ AQD+ N M G PD +++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 344 IINGLCKIKMADEALNLLAEM 364
++ GLC K +A +L ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%)
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
I P + YN++ID CK V A + M +KG SP+VVT+S LI G+C ++ +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 254 GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY 313
+ EM + I + TYT L+ + G + A+++L MI GV PD +T++ ++ G
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 314 CLVNEVNKA 322
C E+ KA
Sbjct: 126 CSKKELRKA 134
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 79/141 (56%)
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
+L+ P TIT+ ++I G C ++ A + D + ++G + V++ TLING CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
+E+ + RGI + V Y T+I C+ + A DL +EM++ G++P+ +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 239 LIYGFCIVGQLKQAIGLLDEM 259
++ G C +L++A +L+++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 78/136 (57%)
Query: 89 IKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL 148
I P+ +T N +I+ +C +++ A +L + +G PD +TF+TLI G C ++ +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 149 QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
+ ++ +G + N V+Y TLI+G C++G+ AA +LL + G+ PD + ++ ++ L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 209 CKDKLVSHAFDLYSEM 224
C K + AF + ++
Sbjct: 126 CSKKELRKAFAILEDL 141
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
ML+ P +N ++ K A + M G P +VT + LIN YC +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
+++ + + +RG +T+T+TTLI G C G + A +++++ G + +++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 169 LINGLCKLGETSAALELLRRIQ 190
++ GLC E A +L +Q
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
DA + M +P + F+ ++ K K + + +M GI + VT LI
Sbjct: 28 DAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 87
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDV 154
+ +C +G +++A +L ++ G PD ITF ++ GLC ++++A +D+
Sbjct: 88 HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 156/327 (47%), Gaps = 22/327 (6%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEF-TGIKPSLVTMN 97
P DA F+ +MP P + + VL++ K Y A+ L + M G+ P T
Sbjct: 214 PVDARRVFD---EMPE-PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFG 269
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK--GLCLHGKIQRALQFHDDVL 155
++ +L ++ + ++ G + + ++L+ G C G ++ A Q + +
Sbjct: 270 TVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC--GSVREARQVFNGMS 327
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
+ N VS+ L+ G C+ GE A+E+ R ++ + D+ + T++ + V
Sbjct: 328 KK----NSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVR 379
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
+++ + V +G NV+ SALI + G + A + +M ++N+ T+ ++
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM----ITWNAML 435
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR-GE 334
AL + G+ EA + M+K+G+KPD +++ +++ V++ ++ F M++ G
Sbjct: 436 SALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGI 495
Query: 335 TPDVHSYNIIINGLCKIKMADEALNLL 361
P Y+ +I+ L + + +EA NLL
Sbjct: 496 KPGTEHYSCMIDLLGRAGLFEEAENLL 522
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 149/322 (46%), Gaps = 28/322 (8%)
Query: 51 QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEF------TGIKPSLVTMNILINCYC 104
++P+TP ++ SL++T + S H ++F +G++ N L++ Y
Sbjct: 56 EIPATPKLY------ASLLQT--CNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYF 107
Query: 105 HLGQ-INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ 163
LG + V G + D I++T+++ G + +AL+ ++++ G N+
Sbjct: 108 KLGPGMRETRRVFDGR----FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163
Query: 164 VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSE 223
+ + + +LGE + G + + + +T+ ++ A ++ E
Sbjct: 164 FTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE 223
Query: 224 MVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL-KNIDPDVYTYTILVDALGKEG 282
M P+V+ ++A++ F ++A+GL M K + PD T+ ++ A G
Sbjct: 224 MP----EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 283 KVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYN 342
++++ K + +I G+ +VV +SL+D Y V +A+ VFN MS++ S++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSV----SWS 335
Query: 343 IIINGLCKIKMADEALNLLAEM 364
++ G C+ ++A+ + EM
Sbjct: 336 ALLGGYCQNGEHEKAIEIFREM 357
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 114/272 (41%), Gaps = 40/272 (14%)
Query: 125 QPDTITFTTLIKGLCLHGKIQRALQ-FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
+PD I +T ++ + + AL F+ +G + + ++GT++ L
Sbjct: 226 EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGK 285
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
E+ ++ GI +VV+ ++++D K V A +++ M K N V++SAL+ G+
Sbjct: 286 EIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK----NSVSWSALLGGY 341
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
C G+ ++AI + EM K D+Y + ++ A VR K + +++G +V
Sbjct: 342 CQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNV 397
Query: 304 VTYNSLMDGYCLVNEVNKAQDV-------------------------------FNAMSQR 332
+ ++L+D Y ++ A V FN M ++
Sbjct: 398 IVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKK 457
Query: 333 GETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
G PD S+ I+ M DE N M
Sbjct: 458 GIKPDYISFIAILTACGHTGMVDEGRNYFVLM 489
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTY 236
G A EL + + G+ P+ YN ++ + C + +S A+ L+ +M+ + + P+V +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
LI GFC GQ+ A+ LLD+M K PD L+ L +G E K L MI
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
+G P N L+ G+C +V +A DV + + GET ++ ++I +C
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHY-STAISLSHQMEFTGIKPSLVTMN 97
P +S F +ML+ TP N++L LV + Y A L G+ P+ + N
Sbjct: 135 PEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYN 194
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+L+ +C ++ A+ + +L+R PD ++ LI+G C G++ A++ DD+L +
Sbjct: 195 LLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNK 254
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
GF+ ++ TLI GLC G + L + +G P + N ++ C V A
Sbjct: 255 GFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFC 244
D+ ++ G + + T+ +I C
Sbjct: 311 CDVVEVVMKNGETLHSDTWEMVIPLIC 337
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 5/224 (2%)
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLH-GKIQRALQFHDDVLAQ 157
LI Y S +L+ + P ++ L H G +Q+A +
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + N SY L+ C + S A +L ++ R + PDV Y +I C+ V+ A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
+L +M+ KG P+ LI G C G + L+EM K P LV
Sbjct: 245 MELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 300
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
GKV EA +++ V++K G T+ ++ C +E K
Sbjct: 301 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 143 KIQRALQFH--DDVLAQ----GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
K+ R F+ DDVLA+ G+ L + LI + L ++ P
Sbjct: 93 KLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTP 152
Query: 197 DVVMYNTIIDSLCKDK-LVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGL 255
N I+D L + + AF+L+ G+ PN +Y+ L+ FC+ L A L
Sbjct: 153 QPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQL 212
Query: 256 LDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCL 315
+M +++ PDV +Y IL+ ++G+V A +L M+ +G PD +L+ G C
Sbjct: 213 FGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCD 268
Query: 316 VNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
++ + M +G +P N ++ G C +EA +++
Sbjct: 269 QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVV 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
G L++A L L + P+ +Y +L+ A + A + M+++ V PDV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
L+ G+C +VN A ++ + M +G PD +I GLC M DE L EM
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEM 282
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 263 NIDPDVYTYTILVDAL-GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
N P ++D L G +++A + GV P+ +YN LM +CL ++++
Sbjct: 149 NFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSI 208
Query: 322 AQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
A +F M +R PDV SY I+I G C+ + A+ LL +M
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDM 251
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 193 GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF-----CIVG 247
GI D V +N I S C+ ++ A+ EM G++P+VVTY+ LI C++G
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 248 QLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYN 307
GL + M LK P++ T+ + + L + +A ++L +M K V+PD +TYN
Sbjct: 232 N-----GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYN 286
Query: 308 SLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
++ G+ L + A+ V+ AM +G P++ Y +I+ LCK
Sbjct: 287 MVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCK 329
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 88 GIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
GI V+ NI I +C LG ++ A+ + + K G PD +T+TTLI L H +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
+ ++ +G N ++ I L A +LL + ++PD + YN +I
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
+ A +Y+ M KG PN+ Y +I+ C G A + + K P+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP 301
+ T +L+ L K+G++ +AK+++ ++ + V P
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIME-LVHRRVPP 384
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 3/215 (1%)
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
H L QG + ++ G K G T AL+ + G K V +N + L
Sbjct: 96 HQKTLPQGRREGFIVRIIMLYG--KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSF 153
Query: 211 DKLVSHAFDLYSEMVAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
+ + ++ + +K GI + V+++ I FC +G L A + EM + PDV
Sbjct: 154 NPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVV 213
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
TYT L+ AL K + + +M+ +G KP++ T+N + A D+ M
Sbjct: 214 TYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLM 273
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ PD +YN++I G + D A + M
Sbjct: 274 PKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAM 308
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINC-----YCHLGQINSAFSV 115
FN + S + A +ME +G+ P +VT LI+ C +G N +++
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG--NGLWNL 237
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL---NQVSYGTLING 172
+ +LK G +P+ TF I+ L +RA +D +L L + ++Y +I G
Sbjct: 238 M--VLK-GCKPNLTTFNVRIQFLV---NRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 173 LCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPN 232
A + + G+G KP++ +Y T+I LCK A+ + + + K PN
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 233 VVTYSALIYGFCIVGQLKQAIGLLD 257
+ T L+ G GQL QA +++
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP + + ++++L K + L + M G KP+L T N+ I + + A
Sbjct: 209 TPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDAND 268
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+L + K +PD+IT+ +IKG L A + + + +G+ N Y T+I+ LC
Sbjct: 269 LLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLC 328
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP 231
K G A + + + P++ ++ L K + A + E+V + + P
Sbjct: 329 KAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 23/279 (8%)
Query: 96 MNILINCYCH---LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL--QF 150
NI+I H Q +S SV + PD TF L+ H + L +
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSF--HNPLHLPLGQRT 84
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
H +L G + +L+N G+ +A +R+ D+ +N+++++ K
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSA----QRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN-----ID 265
L+ A L+ EM + NV+++S LI G+ + G+ K+A+ L EM L +
Sbjct: 141 AGLIDDARKLFDEMPER----NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVR 196
Query: 266 PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
P+ +T + ++ A G+ G + + K + A + K V+ D+V +L+D Y + +A+ V
Sbjct: 197 PNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 326 FNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
FNA+ G DV +Y+ +I L + DE L +EM
Sbjct: 257 FNAL---GSKKDVKAYSAMICCLAMYGLTDECFQLFSEM 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 126/275 (45%), Gaps = 27/275 (9%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N V+ + K A L +M + ++++ + LIN Y G+ A + +
Sbjct: 131 WNSVVNAYAKAGLIDDARKLFDEMP----ERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 121 -----KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
+ +P+ T +T++ G +++ H + ++ V LI+ K
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK 246
Query: 176 LGETSAALELLRRI-QGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV-AKGISPNV 233
G +LE +R+ G K DV Y+ +I L L F L+SEM + I+PN
Sbjct: 247 CG----SLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNS 302
Query: 234 VTYSALIYGFCI----VGQLKQAIGLL-DEMGLKNIDPDVYTYTILVDALGKEGKVREAK 288
VT+ ++ G C+ + + K ++ +E G I P + Y +VD G+ G ++EA+
Sbjct: 303 VTFVGIL-GACVHRGLINEGKSYFKMMIEEFG---ITPSIQHYGCMVDLYGRSGLIKEAE 358
Query: 289 NMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ 323
+ +A M ++PDV+ + SL+ G ++ ++ +
Sbjct: 359 SFIASM---PMEPDVLIWGSLLSGSRMLGDIKTCE 390
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 150/324 (46%), Gaps = 9/324 (2%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
I R+ ++ + +N ++ ++ Y A+ + +M T +KP T++ ++
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ + + ++++G D ++L+ +I+ + + V ++ +
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS----ERVFSRLYCR 306
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
+ +S+ +L+ G + G + AL L R++ +KP V ++++I + + L+
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
++ G N+ SAL+ + G +K A + D M + +D +T I+ AL
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV--LDEVSWTAIIMGHALHGH 424
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ-RGETPDVHS 340
G EA ++ M +QGVKP+ V + +++ V V++A FN+M++ G ++
Sbjct: 425 G--HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEH 482
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
Y + + L + +EA N +++M
Sbjct: 483 YAAVADLLGRAGKLEEAYNFISKM 506
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 123/287 (42%), Gaps = 33/287 (11%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK----------GLCL 140
P ++ +I C+ + A + + G PD F +++K G +
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 141 HGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG---IKPD 197
HG I R L D+ L+N Y L+ K+ + E+ +R G +K +
Sbjct: 128 HGFIVR-LGMDCDLYTGNALMNM--YAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 198 VVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 257
+ IDS V F++ +VV+Y+ +I G+ G + A+ ++
Sbjct: 185 TCIMPFGIDS------VRRVFEVMPR-------KDVVSYNTIIAGYAQSGMYEDALRMVR 231
Query: 258 EMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN 317
EMG ++ PD +T + ++ + V + K + +I++G+ DV +SL+D Y
Sbjct: 232 EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA 291
Query: 318 EVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ ++ VF+ + R D S+N ++ G + +EAL L +M
Sbjct: 292 RIEDSERVFSRLYCR----DGISWNSLVAGYVQNGRYNEALRLFRQM 334
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
++ ++ +G + N V+Y TLI GL + G+ A E+ + + G+ PD++ YN ++D
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 208 LCKD-KL--------VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 258
LCK+ KL V +DL+ + KG+ PNVVTY+ +I GFC G ++A L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 259 MGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMD 311
M PD TY L+ A ++G + ++ M D TY + D
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+L+ EM +G+ N VTY+ LI G G A + EM + PD+ TY IL+D L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 279 GKE---------GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
K GKV + ++ + +GVKP+VVTY +++ G+C +A +F M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ G PD +YN +I + + L+ EM
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+RG +T+T+TTLI+GL G A + ++++ G + ++Y L++GLCK G+
Sbjct: 9 QRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLE 68
Query: 181 AAL---------ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP 231
AL +L + +G+KP+VV Y T+I CK A+ L+ +M G P
Sbjct: 69 KALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLP 128
Query: 232 NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+ TY+ LI G + L+ EM D TY ++ D L
Sbjct: 129 DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 78 ISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKG 137
+ L +M G+ + VT LI G + A + ++ G PD +T+ L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 138 LCLHGKIQRAL---QFHD--DVLA----QGFLLNQVSYGTLINGLCKLGETSAALELLRR 188
LC +GK+++AL + D D+ +G N V+Y T+I+G CK G A L R+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 189 IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTY 236
++ G PD YNT+I + +D + + +L EM + + + TY
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 9/177 (5%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F M Q + ++ L + A + +M G+ P ++T NIL++ C
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK 63
Query: 106 LGQINSA---------FSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
G++ A + + + +G +P+ +T+TT+I G C G + A +
Sbjct: 64 NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKE 123
Query: 157 QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
G L + +Y TLI + G+ +A+ EL++ ++ D Y + D L +L
Sbjct: 124 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 180
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 147/332 (44%), Gaps = 52/332 (15%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLT--SLVKTKHYSTAISLSHQMEFTGIKPSLVT 95
+P A++ + + ++P + LT L K++ +S +L +E P + T
Sbjct: 45 DPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEAL---IESHKNNPKIKT 101
Query: 96 ---MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKI-QRALQFH 151
++ LI Y + A + + K G ++F L+ CLH + +R Q
Sbjct: 102 ETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALL-AACLHSDLFERVPQLF 160
Query: 152 DDVLAQ--GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
D+ + +++SYG LI C G+ A+E++R ++ +G++ ++ + TI+ SL
Sbjct: 161 DEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLY 220
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
K+ LV A L+ EMV KG C ++D VY
Sbjct: 221 KNGLVDEAESLWIEMVNKG---------------C------------------DLDNTVY 247
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
++ A +V+E ++ M G+KPD V+YN LM YC+ +++A+ V+ +
Sbjct: 248 NVRLMNAAKESPERVKE---LMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGL 304
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
Q P+ ++ +I LC + D+ L +
Sbjct: 305 EQ----PNAATFRTLIFHLCINGLYDQGLTVF 332
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 134/300 (44%), Gaps = 14/300 (4%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQM--EFTGIKPSLVTMNIL 99
A+ F M ++ + + FN +L + + + + L + + I P ++ +L
Sbjct: 121 AMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGML 180
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
I YC G+ A ++ + +G + I FTT++ L +G + A +++ +G
Sbjct: 181 IKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGC 240
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
L+ Y + K EL+ + G+KPD V YN ++ + C ++S A
Sbjct: 241 DLDNTVYNVRLMNAAKESPERVK-ELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKK 299
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALG 279
+Y + PN T+ LI+ CI G Q + + + + + PD T L + L
Sbjct: 300 VYEGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLV 355
Query: 280 KEGKVREAKNMLAVMIKQGVKPDVVT-YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
K ++ +A+ +A ++K+ P +VT + L + L ++ N A A+S +T +V
Sbjct: 356 KNNRMEDARG-VARIVKKKFPPRLVTEWKKLEEKLGLYSKGNAA-----AVSSSSQTREV 409
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 143/319 (44%), Gaps = 17/319 (5%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F+RM + S+P F +N +++ + Y A++L QM G+KP T ++
Sbjct: 150 FDRMSKRDSSP--FAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGG 207
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
+G + ++ ++K G+ D L+ G I +A D + + + VS
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDY----VS 263
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+ +++ G G AL++ R + GI+PD V ++++ + K H L+ ++
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFK---HGRQLHGWVI 320
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
+G+ + +ALI + GQL QA + D+M ++ D ++ ++ A K
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLGQACFIFDQM----LERDTVSWNAIISAHSKNSN-- 374
Query: 286 EAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR-GETPDVHSYNII 344
M + KPD +T+ S++ V + +F+ MS+ G P + Y +
Sbjct: 375 -GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACM 433
Query: 345 INGLCKIKMADEALNLLAE 363
+N + M +EA +++ +
Sbjct: 434 VNLYGRAGMMEEAYSMIVQ 452
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A +++ M + SP +++LI G+ +GQ + A+ L +M + PD +T+ ++
Sbjct: 146 AHEVFDRMSKRDSSP--FAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETP 336
A G G V+ + + ++K+G DV N+L+ Y ++ KA++VF+ + +
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHK---- 259
Query: 337 DVHSYNIIINGLCKIKMADEALNLLAEM 364
D S+N ++ G + EAL++ M
Sbjct: 260 DYVSWNSMLTGYLHHGLLHEALDIFRLM 287
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 119/274 (43%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF 150
P + +I+ Y G + A+ + ++G P +T + L+ L GK + A
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
L + L+ V Y TLI + + G+ A E+ R+ G+ + YNT+I +
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
+ A +++S G+ + Y+ +I + G++ +A+ L EM K I P +
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS 881
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
Y ++V E +L M + G D+ TY +L+ Y ++ +A+ +
Sbjct: 882 YNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVK 941
Query: 331 QRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++G ++ +++ L K M +EA +M
Sbjct: 942 EKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKM 975
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 132/294 (44%), Gaps = 2/294 (0%)
Query: 55 TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFS 114
TP ++ + V+ A L + G P VT++IL+N + G+ A
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 115 VLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
+ L++ + DT+ + TLIK + GK+Q A + ++ + G + +Y T+I+
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
+ + A+E+ + G+ D +Y +I K +S A L+SEM KGI P
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 235 TYSALIYGFCIVGQLKQAIG-LLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
+Y+ ++ C +L + LL M D+ TY L+ + + EA+ + +
Sbjct: 881 SYNMMV-KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITL 939
Query: 294 MIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
+ ++G+ ++SL+ + +A+ + MS+ G +PD I+ G
Sbjct: 940 VKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKG 993
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 109/252 (43%)
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ 149
+PS+V I++ Y +G+I A +L+ G +PD + T++ G+ L
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
F+ V + LL+ Y +++ L K ++L + G+ P+ Y ++ S
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 304
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
K A + EM + G P VTYS++I G ++AIGL ++M + I P Y
Sbjct: 305 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNY 364
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
T ++ K +A ++ A M + + D V ++ Y + + AQ +F
Sbjct: 365 TCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEET 424
Query: 330 SQRGETPDVHSY 341
+ D +Y
Sbjct: 425 ERLNLLADEKTY 436
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 2/256 (0%)
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
Q+ FS + L+ Y+P + +T +++ GKI+ A + ++L G + V+ G
Sbjct: 170 QVRDFFSWMK--LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACG 227
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
T++ + G SA L + +Q R I +YN ++ SL K DL+ EMV +
Sbjct: 228 TMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE 287
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
G+ PN TY+ ++ + G ++A+ EM P+ TY+ ++ K G +A
Sbjct: 288 GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKA 347
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
+ M QG+ P T +++ Y KA +F M + D +II
Sbjct: 348 IGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRI 407
Query: 348 LCKIKMADEALNLLAE 363
K+ + +A ++ E
Sbjct: 408 YGKLGLFHDAQSMFEE 423
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 133/304 (43%), Gaps = 1/304 (0%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N +L+SL K + I L +M G+ P+ T ++++ Y G A +
Sbjct: 261 YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMK 320
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G+ P+ +T++++I G ++A+ ++D+ +QG + + + T+++ K
Sbjct: 321 SLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYP 380
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
AL L ++ I D V+ II K L A ++ E + + TY A+
Sbjct: 381 KALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMS 440
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G + +A+ +++ M ++I + Y +++ K V A+ + K G+
Sbjct: 441 QVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL- 499
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
PD + N +++ Y +N KA+ + D+ Y + CK M EA +L
Sbjct: 500 PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDL 559
Query: 361 LAEM 364
+ +M
Sbjct: 560 IVKM 563
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 118/287 (41%), Gaps = 1/287 (0%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F M + P ++ V++ VK + AI L M GI PS T ++
Sbjct: 311 EALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATML 370
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ Y A S+ A + + D + +I+ G A ++ L
Sbjct: 371 SLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLL 430
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
++ +Y + G AL+++ ++ R I Y ++ K + V A +
Sbjct: 431 ADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEA 490
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ + G+ P+ + + ++ + + ++A G + ++ + + D+ Y + K
Sbjct: 491 FRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCK 549
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
EG V EA++++ M ++ D +L + +VN+ +K + V N
Sbjct: 550 EGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLN 596
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLC----LHGKIQRALQFHDDV 154
+I Y G+++ A S+ + + K+G +P T ++ ++K +C LH ++ LQ +
Sbjct: 850 MIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAME-- 906
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
G + +Y TLI + + + A + + ++ +GI +++++ +L K ++
Sbjct: 907 -RNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMM 965
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
A Y +M GISP+ ++ G+ G ++ I ++M +++ D + +++
Sbjct: 966 EEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVV 1025
Query: 275 VD---ALGKEGKV 284
D A+GKE V
Sbjct: 1026 EDLYKAVGKEQDV 1038
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 130/291 (44%), Gaps = 10/291 (3%)
Query: 68 LVKTKHYSTAI-SLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQP 126
LVK +++T + L + M+ G++PS LI + I +R +
Sbjct: 320 LVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEI 379
Query: 127 DTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY-------GTLINGLCKLGET 179
LI + K AL+ ++D+L +G N +SY L++ K G
Sbjct: 380 SLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIW 439
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
+ LL +++ +G+KP +N ++ + K + A ++ MV G P V++Y AL
Sbjct: 440 RWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGAL 499
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
+ +A + + M I+P++Y YT + L + K +L M +G+
Sbjct: 500 LSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
Query: 300 KPDVVTYNSLMDGYCLVNEVNK-AQDVFNAMSQRGETPDVHSYNIIINGLC 349
+P VVT+N+++ G C N ++ A + F+ M P+ +Y ++I L
Sbjct: 560 EPSVVTFNAVISG-CARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 151/341 (44%), Gaps = 38/341 (11%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P +F +N +L ++ + + A + ME GI P++VT N L+ Y G+ A +
Sbjct: 185 PNLFIYNSLLGAM---RGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGI 241
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQR---ALQFHDDV---LAQGFLLNQVSYG-- 167
L ++G++P+ IT++T L ++ +++ AL+F ++ A+ + N V Y
Sbjct: 242 LDLTKEKGFEPNPITYST---ALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWE 298
Query: 168 -------TLINGLCKL----------GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
I +C T+ L+LL + G++P + +I + +
Sbjct: 299 FEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTR 358
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
++ +LY + + ++ + LI+ + A+ + +++ + +P+ +
Sbjct: 359 EEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLS 418
Query: 271 Y-------TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ 323
Y IL+ A K G R +L M +G+KP +N+++ +E A
Sbjct: 419 YELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAI 478
Query: 324 DVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+F AM GE P V SY +++ L K K+ DEA + M
Sbjct: 479 QIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 125/307 (40%), Gaps = 42/307 (13%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
N M P E +++ + + +HY L ++ + SL N LI
Sbjct: 334 LNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGK 393
Query: 106 LGQINSAFSVLAGILKRGYQPDTIT-------FTTLIKGLCLHGKIQRALQFHDDVLAQG 158
+ +A + +L G +P+ ++ F L+ G + ++ + + +G
Sbjct: 394 AKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKG 453
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
+ + ++ K ET+AA+++ + + G KP V+ Y ++ +L K KL AF
Sbjct: 454 LKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAF 513
Query: 219 DLYS-----------------------------------EMVAKGISPNVVTYSALIYGF 243
+++ EM +KGI P+VVT++A+I G
Sbjct: 514 RVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGC 573
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
G A M +N++P+ TY +L++AL + K R A + +G+K
Sbjct: 574 ARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSS 633
Query: 304 VTYNSLM 310
Y++++
Sbjct: 634 KPYDAVV 640
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
EL +RI+ R + + + N +I + K K A ++Y +++ +G PN ++Y ++ F
Sbjct: 367 ELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHF 426
Query: 244 CIV-------GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
I+ G + + LL++M K + P + ++ A K + A + M+
Sbjct: 427 NILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVD 486
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNI---IINGLCKIKM 353
G KP V++Y +L+ ++A V+N M + G P++++Y ++ G K +
Sbjct: 487 NGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNL 546
Query: 354 ADEALNLLAEM 364
D LL EM
Sbjct: 547 LD---TLLKEM 554
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI F M+ P + + +L++L K K Y A + + M GI+P+L + +
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ N ++L + +G +P +TF +I G +G A ++ + ++
Sbjct: 537 VLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEP 596
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
N+++Y LI L + A EL + Q G+K Y+ ++ S
Sbjct: 597 NEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS 642
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKN------IDPDVYTYTILVDALGKEGKVREAKN 289
+ A+I GF +LK A+ ++D + K I P+++ Y L+ A+ G EA+
Sbjct: 149 FCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFG---EAEK 205
Query: 290 MLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
+L M ++G+ P++VTYN+LM Y E KA + + ++G P+ +Y+ +
Sbjct: 206 ILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTAL 261
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A +N M+++ P ++ + + + L + ++ +L +M GI+PS+VT N +I
Sbjct: 511 EAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVI 570
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ G A+ + +P+ IT+ LI+ L K + A + H +G
Sbjct: 571 SGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLK 630
Query: 161 LNQVSYGTLINGLCKLGET 179
L+ Y ++ G T
Sbjct: 631 LSSKPYDAVVKSAETYGAT 649
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 117/245 (47%), Gaps = 8/245 (3%)
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGET 179
L RG + D++++ +IKGL +G + A++ ++ QG ++Q +G+++ LG
Sbjct: 227 LFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAI 286
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
+ ++ I + + + + +ID CK K + +A ++ M K NVV+++A+
Sbjct: 287 NEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWTAM 342
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
+ G+ G+ ++A+ + +M IDPD YT + A + E I G+
Sbjct: 343 VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL 402
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALN 359
V NSL+ Y +++ + +FN M+ R D S+ +++ + A E +
Sbjct: 403 IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQ 458
Query: 360 LLAEM 364
L +M
Sbjct: 459 LFDKM 463
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 152/324 (46%), Gaps = 30/324 (9%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIK-PSL--VTMNILINC 102
F+R+ Q P +F +N +L + YS A L +ME T K P VT N+LI
Sbjct: 64 FDRIPQ----PNLFSWNNLLLA------YSKA-GLISEMESTFEKLPDRDGVTWNVLIEG 112
Query: 103 YCHLGQINSAFSVLAGILKRGYQPD--TITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
Y G + +A ++ R + + +T T++K +G + Q H V+ GF
Sbjct: 113 YSLSGLVGAAVKAYNTMM-RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE 171
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ L+ +G S A ++ + R + VMYN+++ L ++ A L
Sbjct: 172 SYLLVGSPLLYMYANVGCISDAKKVFYGLDDR----NTVMYNSLMGGLLACGMIEDALQL 227
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
+ +G+ + V+++A+I G G K+AI EM ++ + D Y + ++ A G
Sbjct: 228 F-----RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGG 282
Query: 281 EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHS 340
G + E K + A +I+ + + ++L+D YC ++ A+ VF+ M Q+ +V S
Sbjct: 283 LGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVS 338
Query: 341 YNIIINGLCKIKMADEALNLLAEM 364
+ ++ G + A+EA+ + +M
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDM 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 113/250 (45%), Gaps = 21/250 (8%)
Query: 87 TGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQR 146
T + + + LI+ YC ++ A +V R Q + +++T ++ G G+ +
Sbjct: 299 TNFQDHIYVGSALIDMYCKCKCLHYAKTVF----DRMKQKNVVSWTAMVVGYGQTGRAEE 354
Query: 147 ALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIID 206
A++ D+ G + + G I+ + ++LE + G+ I ++ Y T+ +
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANV----SSLEEGSQFHGKAITSGLIHYVTVSN 410
Query: 207 SL------CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
SL C D + + L++EM + + V+++A++ + G+ + I L D+M
Sbjct: 411 SLVTLYGKCGD--IDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ-GVKPDVVTYNSLMDGYCLVNEV 319
+ PD T T ++ A + G V + + +M + G+ P + Y+ ++D + +
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 320 NKAQDVFNAM 329
+A N M
Sbjct: 525 EEAMRFINGM 534
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%)
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
AAL L ++ GI P V+ Y T+ID + A +++ EM KG PNV TY+++I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQG 298
G C+ G+ ++A LL EM + +P+ Y+ LV L K GK+ EA+ ++ M+K+G
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%)
Query: 111 SAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLI 170
+A + L + + G P + +TTLI G + G++ +A + ++ +G L N +Y ++I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 171 NGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG 228
GLC GE A LL+ ++ RG P+ V+Y+T++ L K +S A + EMV KG
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%)
Query: 252 AIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMD 311
A+ L+ M IDP V YT L+D G++ +AK M M +G P+V TYNS++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 312 GYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
G C+ E +A + M RG P+ Y+ ++ L K EA ++ EM
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%)
Query: 217 AFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVD 276
A + M GI P+V+ Y+ LI G+ + G+L +A + EM +K P+V+TY ++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 277 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
L G+ REA +L M +G P+ V Y++L+ ++++A+ V M ++G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGH 825
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
GK K A L M + G+ P V+ Y +L+DGY + E++KA+++F M+ +G+ P+V
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
+YN +I GLC EA LL EM
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEM 785
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 65/117 (55%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A++ + M+ GI PS++ LI+ Y G+++ A + + +G P+ T+ ++I+
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
GLC+ G+ + A ++ ++G N V Y TL+ L K G+ S A ++++ + +G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 120/237 (50%), Gaps = 12/237 (5%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGI-LKRGYQPDTITFTTLIKGLCLHGKIQRALQF 150
++ ++ +++ C G+I A ++ + L +G + + +TF ++I G C+ + +
Sbjct: 209 TVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVK---RWDFEE 264
Query: 151 HDDVLA----QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIID 206
D VL + +L+ SY LI+G G+ A L+ + + ++ + +YN I++
Sbjct: 265 LDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMN 324
Query: 207 SLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP 266
+ LV +LYSEM ++G++PN TY L+ G C G++ +A+ L+E+ + +
Sbjct: 325 GYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEI 384
Query: 267 DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQ 323
D Y+ L + + G + ++ ++A MI+ G P L D + EVN+ +
Sbjct: 385 DEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADS---LFEVNRKE 438
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
Query: 204 IIDSLCKDKLVSHAFDLYSEM-VAKGISPNVVTYSALIYGFCIVGQLKQAIGL-LDEMGL 261
++ LC + ++ A +L EM + KG+ N+VT+ ++I G C+ + + L L M
Sbjct: 216 VVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLVLKLMEK 274
Query: 262 KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
+++ D+ +Y +L+D GKV EA+ ++ +M + ++ + YN +M+GY V K
Sbjct: 275 ESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEK 334
Query: 322 AQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++++ MS RG TP+ +Y +++NGLCK EA++ L E+
Sbjct: 335 VIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNEL 377
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 12/250 (4%)
Query: 58 IFEFNKVLTSLVKTKHYSTAISLSHQMEFT-GIKPSLVTMNILINCYCHLGQINSAFSVL 116
++ V+T L + A L +M G+K ++VT +I C VL
Sbjct: 210 VYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVL 269
Query: 117 AGILKRGYQPDTITFTTLIKGLCLHGKIQRA----LQFHDDVL-AQGFLLNQVSYGTLIN 171
+ K D ++ LI G +GK++ A L HD L + +L Y ++N
Sbjct: 270 KLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYL-----YNLIMN 324
Query: 172 GLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP 231
G + G +EL + RG+ P+ Y +++ LCK V A +E+
Sbjct: 325 GYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEI 384
Query: 232 NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNML 291
+ YS L VG + +++ ++ EM P L D+L + + +EA+ ++
Sbjct: 385 DEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNR-KEAQMLI 443
Query: 292 AVMIKQGVKP 301
+++K G+KP
Sbjct: 444 TIVVKCGIKP 453
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 125/271 (46%), Gaps = 4/271 (1%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
N +I Y G+ + V + + D T T + L +++ A F ++
Sbjct: 143 NSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVE 202
Query: 157 QGF-LLNQVSYGTLINGLCKLGETSAALELLRRIQ-GRGIKPDVVMYNTIIDSLCKDKLV 214
G ++ S ++ LC GE + A EL+ + +G+K ++V + ++I C +
Sbjct: 203 SGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWD 261
Query: 215 SHAFDLYSEMVAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTI 273
DL +++ K + ++ +Y LI GF G++++A L+ M K + + Y Y +
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNL 321
Query: 274 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
+++ + G V + + + M +GV P+ TY LM+G C +V +A N +
Sbjct: 322 IMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE 381
Query: 334 ETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
D Y+ + ++ M D++L ++AEM
Sbjct: 382 FEIDEEMYSTLSEECYRVGMIDKSLEVVAEM 412
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 132/284 (46%), Gaps = 9/284 (3%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F+RM + + +N +++ V+ AI + M +K VT+ L++
Sbjct: 332 FDRMFE----KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
+ V ++ ++ D + +T++ G I A + D + + +L
Sbjct: 388 TENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL---- 443
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+ TL+ + G + AL L +Q G+ P+V+ +N II SL ++ V A D++ +M
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 226 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
+ GI PN+++++ ++ G G ++AI L +M + P+ ++ T+ + A +
Sbjct: 504 SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLH 563
Query: 286 EAKNMLAVMIKQGVKPDVVTYN-SLMDGYCLVNEVNKAQDVFNA 328
+ + +I+ +V+ SL+D Y ++NKA+ VF +
Sbjct: 564 IGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 141/304 (46%), Gaps = 8/304 (2%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N ++ V+ AI L M G++P+ VT++ ++ ++G + A +
Sbjct: 242 WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI 301
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
G + D I T+L+ C G I+ A D + F + V++ +I+G + G
Sbjct: 302 VNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGYVQQGLVE 357
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A+ + + ++ +K D V T++ + + + + ++ + ++V S ++
Sbjct: 358 DAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVM 417
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
+ G + A + D ++ D+ + L+ A + G EA + M +GV
Sbjct: 418 DMYAKCGSIVDAKKVFD----STVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVP 473
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNL 360
P+V+T+N ++ +V++A+D+F M G P++ S+ ++NG+ + ++EA+
Sbjct: 474 PNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILF 533
Query: 361 LAEM 364
L +M
Sbjct: 534 LRKM 537
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 156/353 (44%), Gaps = 56/353 (15%)
Query: 45 HFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIK--PSLVTMNILINC 102
H + PS+ F ++SL K A+SL +M+F ++ P + IL C
Sbjct: 25 HHDEQAHSPSSTSYFH---RVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYG-EILQGC 80
Query: 103 YCHLGQINSAFSVLAGILKRG--YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
+ +++ + A ILK G Y + T L+ + K AL+ + + ++ +
Sbjct: 81 -VYERDLSTGKQIHARILKNGDFYARNEYIETKLV---IFYAKCD-ALEIAEVLFSKLRV 135
Query: 161 LNQVSYGTLINGLCKLGETSAAL----ELL---------------------------RRI 189
N S+ +I C++G AL E+L R +
Sbjct: 136 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGV 195
Query: 190 QG----RGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
G G++ V + +++ D K ++ A ++ E+ + N V ++AL+ G+
Sbjct: 196 HGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQ 251
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 305
G+ ++AI L +M + ++P T + + A G V E K A+ I G++ D +
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL 311
Query: 306 YNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
SL++ YC V + A+ VF+ M ++ DV ++N+II+G + + ++A+
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAI 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 123/280 (43%), Gaps = 38/280 (13%)
Query: 40 GDAISHFNRMLQMPSTPP-IFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
G+A+ F M Q+ PP + +N ++ SL++ A + QM+ +GI P+L++
Sbjct: 458 GEALRLFYGM-QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK----------GLCLHGKIQRAL 148
++N G A L + + G +P+ + T + G +HG I R L
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL 576
Query: 149 QFHD---------DVLAQGFLLNQVS--YGT-----------LINGLCKLGETSAALELL 186
Q D+ A+ +N+ +G+ +I+ G A+ L
Sbjct: 577 QHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALY 636
Query: 187 RRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK-GISPNVVTYSALIYGFCI 245
R ++G G+KPD + ++ + ++ A ++++++V+K + P + Y ++
Sbjct: 637 RSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLAS 696
Query: 246 VGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVR 285
G+ ++A+ L++EM K PD LV + K+ K
Sbjct: 697 AGETEKALRLIEEMPFK---PDARMIQSLVASCNKQRKTE 733
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 108/249 (43%), Gaps = 16/249 (6%)
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
++ + P + ++ + LC +G+I+ AL ++ + + YG ++ G + S
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV-----SHAFDLYSEMVAKGISPNVVT 235
++ RI G D N I++ KLV A ++ + +K NV +
Sbjct: 88 TGKQIHARILKNG---DFYARNEYIET----KLVIFYAKCDALEIAEVLFSKLRVRNVFS 140
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMI 295
++A+I C +G + A+ EM I PD + + A G R + + ++
Sbjct: 141 WAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVV 200
Query: 296 KQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMAD 355
K G++ V +SL D Y ++ A VF+ + R ++N ++ G + +
Sbjct: 201 KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAV----AWNALMVGYVQNGKNE 256
Query: 356 EALNLLAEM 364
EA+ L ++M
Sbjct: 257 EAIRLFSDM 265
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 147/319 (46%), Gaps = 40/319 (12%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
NK L ++++ + + A + ++E + VT N +I+ Y ++N A + + K
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLE----ARNTVTWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 122 RGYQPDTITFTTLIKGLCLHGKI---QRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE 178
R D +T+ T+I G G I + A + D++ ++ + S+ T+I+G K
Sbjct: 100 R----DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRR 151
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
AL L ++ R + V ++ +I C++ V A L+ +M K SP A
Sbjct: 152 IGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCA 203
Query: 239 LIYGFCIVGQLKQAIGLLDEMG--LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM-- 294
L+ G +L +A +L + G + + VY Y L+ G+ G+V A+ + +
Sbjct: 204 LVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPD 263
Query: 295 ---------IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIII 345
++ +VV++NS++ Y V +V A+ +F+ M R D S+N +I
Sbjct: 264 LCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMI 319
Query: 346 NGLCKIKMADEALNLLAEM 364
+G + ++A L +EM
Sbjct: 320 DGYVHVSRMEDAFALFSEM 338
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 141/307 (45%), Gaps = 40/307 (13%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQIN---SAFSVLA 117
+N +++ VK + + A L M K +VT N +I+ Y G I A +
Sbjct: 74 WNTMISGYVKRREMNQARKLFDVMP----KRDVVTWNTMISGYVSCGGIRFLEEARKLFD 129
Query: 118 GILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+ R D+ ++ T+I G + +I AL + + + N VS+ +I G C+ G
Sbjct: 130 EMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNG 181
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL--YSEMVAKGISPNVVT 235
E +A+ L R++ + P + +I + ++L A+ L Y +V+ G V
Sbjct: 182 EVDSAVVLFRKMPVKDSSPLCALVAGLIKN---ERLSEAAWVLGQYGSLVS-GREDLVYA 237
Query: 236 YSALIYGFCIVGQLKQAIGLLDEMG-----------LKNIDPDVYTYTILVDALGKEGKV 284
Y+ LI G+ GQ++ A L D++ + +V ++ ++ A K G V
Sbjct: 238 YNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDV 297
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
A+ ++ Q D +++N+++DGY V+ + A +F+ M R D HS+N++
Sbjct: 298 VSAR----LLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMM 349
Query: 345 INGLCKI 351
++G +
Sbjct: 350 VSGYASV 356
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 129/267 (48%), Gaps = 18/267 (6%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH 151
++V+ N +I Y +G + SA + + R DTI++ T+I G +++ A
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALF 335
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
++ + + S+ +++G +G +EL R + + V +N+II + K+
Sbjct: 336 SEMPNR----DAHSWNMMVSGYASVGN----VELARHYFEKTPEKHTVSWNSIIAAYEKN 387
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGL-LDEMGLKNIDPDVYT 270
K A DL+ M +G P+ T ++L+ G + +G+ + ++ +K + PDV
Sbjct: 388 KDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA--STGLVNLRLGMQMHQIVVKTVIPDVPV 445
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
+ L+ + G++ E++ + M +K +V+T+N+++ GY ++A ++F +M
Sbjct: 446 HNALITMYSRCGEIMESRRIFDEM---KLKREVITWNAMIGGYAFHGNASEALNLFGSMK 502
Query: 331 QRGETPDVHSYNIIINGLCKIKMADEA 357
G P ++ ++N + DEA
Sbjct: 503 SNGIYPSHITFVSVLNACAHAGLVDEA 529
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 10/277 (3%)
Query: 82 HQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLH 141
H E T K + V+ N +I Y A + + G +PD T T+L+
Sbjct: 364 HYFEKTPEKHT-VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGL 422
Query: 142 GKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMY 201
++ +Q H ++ + + + + LI + GE +E R +K +V+ +
Sbjct: 423 VNLRLGMQMHQ-IVVKTVIPDVPVHNALITMYSRCGEI---MESRRIFDEMKLKREVITW 478
Query: 202 NTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIG-LLDEMG 260
N +I S A +L+ M + GI P+ +T+ +++ G + +A + M
Sbjct: 479 NAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMS 538
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN 320
+ I+P + Y+ LV+ +G+ EA + ++ +PD + +L+D + N V
Sbjct: 539 VYKIEPQMEHYSSLVNVTSGQGQFEEA---MYIITSMPFEPDKTVWGALLDACRIYNNVG 595
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEA 357
A AMS R E Y ++ N + + DEA
Sbjct: 596 LAHVAAEAMS-RLEPESSTPYVLLYNMYADMGLWDEA 631
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 6/256 (2%)
Query: 94 VTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDD 153
VT LI C+C +N +V + PD L L G ++ +Q +
Sbjct: 635 VTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFER 694
Query: 154 VLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
V L + + L LG + A +++R++G G + +YN +I LC +K
Sbjct: 695 VFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKK 754
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTI 273
S AF + EM+ K P++ + LI C + A L ++ ID Y +
Sbjct: 755 DSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQ-----IDSS-YVHYA 808
Query: 274 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
L+ L GK+ +A+N L +M+ G+ YN + GYC N K ++V M ++
Sbjct: 809 LIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKN 868
Query: 334 ETPDVHSYNIIINGLC 349
V SY + +C
Sbjct: 869 IICSVKSYREYVRKMC 884
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 6/256 (2%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTL-- 134
A+ L M G+ P ILI+ + + SA+ + ++ + + + ++
Sbjct: 202 AVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGK 261
Query: 135 -IKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
I+ LCL K+Q A ++A G +LN Y + G E +LL I
Sbjct: 262 VIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIG---YNEKQDFEDLLSFIGEVK 318
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
+PDV + N I+ SLC+ A+ E+ G + VT+ LI C G +K+A+
Sbjct: 319 YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAV 378
Query: 254 GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY 313
L E+ K PDVY+Y ++ L ++G + +L M + G+ + T+ ++ GY
Sbjct: 379 LYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGY 438
Query: 314 CLVNEVNKAQDVFNAM 329
C + +A+ + N M
Sbjct: 439 CKARQFEEAKRIVNKM 454
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 143/338 (42%), Gaps = 31/338 (9%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P +F N++L SL + A ++E G K VT ILI C+ G I A
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCK 175
L+ I+ +GY+PD ++ ++ GL G Q D++ G +L+ ++ ++ G CK
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 176 LGETSAALELLRRIQGRGI-------KP-----DVVMYNTIIDSLCKDK----------- 212
+ A ++ ++ G G+ P +V ++ + L +D
Sbjct: 441 ARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFD 500
Query: 213 -----LVSHA-FDLYSEMVAKGISPNVV-TYSALIYGFCIVGQLKQAIGLLDEMGLKNID 265
L H D Y + V + +V+ +++LI G L+ A+ LLDEM
Sbjct: 501 DLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMARWGQK 560
Query: 266 PDVYTYTILVDAL-GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQD 324
++ +L+ +L +R + ++L K + D T N L+ YC ++
Sbjct: 561 LSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKL 620
Query: 325 VFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLA 362
+F+ M Q D +Y +I CK + ++ LN+
Sbjct: 621 IFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWG 658
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 126/307 (41%), Gaps = 50/307 (16%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
NPG I + + M E NKVL +M+ G+ P T N
Sbjct: 905 NPGGVIIYNMLIFYMFRAKNHLEVNKVLL----------------EMQGRGVLPDETTFN 948
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
L++ Y +S+ L+ ++ +G +P+ + + LC +G +++AL + ++
Sbjct: 949 FLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESK 1008
Query: 158 GFLL-NQVSYGTLINGLCKLGETSAALELLRRIQGRGIK--------------------- 195
G+ L + V ++ L GE A + L R+ G+
Sbjct: 1009 GWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAV 1068
Query: 196 ------------PDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
P Y+++I+ L + + A D ++EMV G+SP++ T+S L++ F
Sbjct: 1069 HLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKF 1128
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
C Q+ ++ L+ M P + ++D E +A M+ +M K G + D
Sbjct: 1129 CEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDF 1188
Query: 304 VTYNSLM 310
T+ SL+
Sbjct: 1189 ETHWSLI 1195
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 121/276 (43%), Gaps = 16/276 (5%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLA 156
N++ YC VL ++++ ++ ++ +CL + A+ L
Sbjct: 842 NVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAIS-----LK 896
Query: 157 QGFLLNQ------VSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
+ LL + + Y LI + + ++L +QGRG+ PD +N ++
Sbjct: 897 EFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSS 956
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLK--NIDPDV 268
S + S M++KG+ PN + A+ C G +K+A+ L M K N+ V
Sbjct: 957 SADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSV 1016
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNA 328
T +V+ L +G++ +A++ L + + G+ Y++++ ++ A + N
Sbjct: 1017 -VQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP--NYDNIIKKLSDRGNLDIAVHLLNT 1073
Query: 329 MSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
M + P SY+ +INGL + D+A++ EM
Sbjct: 1074 MLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEM 1109
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 7/289 (2%)
Query: 77 AISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIK 136
A S+ ++E G N LI C + ++AF++L +L + + P + LI
Sbjct: 723 AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIP 782
Query: 137 GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP 196
LC K A LA+ + V Y LI GL G+ A LR + G+
Sbjct: 783 RLCRANKAGTAFN-----LAEQIDSSYVHYA-LIKGLSLAGKMLDAENQLRIMLSNGLSS 836
Query: 197 DVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 256
+YN + CK ++ MV K I +V +Y + C+ Q AI L
Sbjct: 837 YNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLK 896
Query: 257 DEMGLKNIDP-DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCL 315
+ + L +P V Y +L+ + + E +L M +GV PD T+N L+ GY
Sbjct: 897 EFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSS 956
Query: 316 VNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + + +AM +G P+ S + + LC +AL+L M
Sbjct: 957 SADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVM 1005
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 110/274 (40%), Gaps = 7/274 (2%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N ++ L K S A ++ +M PSL + +LI C + +AF++ I
Sbjct: 742 YNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQI- 800
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ LIKGL L GK+ A +L+ G Y + G CK
Sbjct: 801 -----DSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWM 855
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP-NVVTYSAL 239
E+L + + I V Y + +C + A L ++ +P V+ Y+ L
Sbjct: 856 KVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNML 915
Query: 240 IYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
I+ + +L EM + + PD T+ LV + L+ MI +G+
Sbjct: 916 IFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGM 975
Query: 300 KPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
KP+ + ++ C +V KA D++ M +G
Sbjct: 976 KPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKG 1009
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Query: 145 QRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL-LRRIQGRGI--KPDVVMY 201
++A+ D + +G + Y LI+ L ++ T +A + L ++ R ++
Sbjct: 200 RKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSI 259
Query: 202 NTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL 261
+I+ LC D+ V A L ++VA G N YS + G+ + + LL +G
Sbjct: 260 GKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGY---NEKQDFEDLLSFIGE 316
Query: 262 KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
+PDV+ ++ +L + A + + G K D VT+ L+ C ++ +
Sbjct: 317 VKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKR 376
Query: 322 AQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
A + + +G PDV+SYN I++GL + + +L EM
Sbjct: 377 AVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEM 419
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/264 (18%), Positives = 113/264 (42%), Gaps = 13/264 (4%)
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ 149
+P + N +++ C A+ + + G++ D +TF LI C G I+RA+
Sbjct: 320 EPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVL 379
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
+ +++++G+ + SY +++GL + G +L ++ G+ + + ++ C
Sbjct: 380 YLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYC 439
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
K + A + ++M G+ L F +VG A+ LK + +
Sbjct: 440 KARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAV------RLKRDNDSTF 493
Query: 270 TYTILVDALGK----EGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
+ D LG + + + +++ + V P+ +NSL+ ++ A +
Sbjct: 494 SKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRL 550
Query: 326 FNAMSQRGETPDVHSYNIIINGLC 349
+ M++ G+ S+ +++ LC
Sbjct: 551 LDEMARWGQKLSRRSFAVLMRSLC 574
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 14/252 (5%)
Query: 119 ILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC-KLG 177
+L R P+ F +LI G +Q AL+ D++ G L++ S+ L+ LC
Sbjct: 522 VLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRA 578
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
++ LL + + D N ++ CK H+ ++ +MV + VTY+
Sbjct: 579 HLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYT 638
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA-----KNMLA 292
+LI FC L + + N PD+ L + L ++G V E + ++
Sbjct: 639 SLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFIS 698
Query: 293 VMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIK 352
+ Q + + G+ + A V + G + YN +I GLC K
Sbjct: 699 YPLSQSEACRIFVEKLTVLGFSCI-----AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEK 753
Query: 353 MADEALNLLAEM 364
A +L EM
Sbjct: 754 KDSAAFAILDEM 765
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 126/275 (45%), Gaps = 8/275 (2%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF 150
PS+ T +I+ N Y L N S + G + D+ ++K H +Q+A F
Sbjct: 53 PSVYTRDIVSNIYNILKYSNWD-SAQEQLPHLGVRWDSHIINRVLKA---HPPMQKAWLF 108
Query: 151 HDDVLA-QGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
+ +GF + +Y T+++ + G + + ++ +G+ D V Y ++I +
Sbjct: 109 FNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVS 168
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
V A L+ EM G P VV+Y+A + G++++A + EM + P+ +
Sbjct: 169 SSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCH 228
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
TYT+L++ L GK EA ++ M + GV+PD N L+ E + V M
Sbjct: 229 TYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYM 288
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ G V Y I + L +K A E+ +LL E+
Sbjct: 289 KENGV---VLRYPIFVEALETLKAAGESDDLLREV 320
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 2/226 (0%)
Query: 74 YSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTT 133
YS S Q+ G++ +N ++ + + + F+ A I +G++ D T+TT
Sbjct: 70 YSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAAQI--KGFKHDHFTYTT 127
Query: 134 LIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRG 193
++ G+IQ + +G L++ V+Y +LI+ + G+ A+ L ++ G
Sbjct: 128 MLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNG 187
Query: 194 IKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAI 253
+P VV Y + L D V A ++Y EM+ +SPN TY+ L+ G+ ++A+
Sbjct: 188 CEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEAL 247
Query: 254 GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
+ +M + PD IL+ K G+ +L M + GV
Sbjct: 248 DIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 135/346 (39%), Gaps = 58/346 (16%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A + ML+ +P + ++ LV T A+ + +M+ G++P NILI
Sbjct: 210 EATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
G+ + VL + + G F ++ L G+ DD L
Sbjct: 270 AKALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGE-------SDD------L 316
Query: 161 LNQVSYGTLINGLCK--LGETSAALE---------------------------LLRRIQG 191
L +V+ + LC + ET A LL +++
Sbjct: 317 LREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDILLNQMRD 376
Query: 192 RGIKPDVVMYNTIIDS---LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQ 248
R IK D + + II++ C+ + S AFD EM GI Y ALI F +
Sbjct: 377 RNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEM---GIHLKKSAYLALIGNFLRSNE 433
Query: 249 LKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD----VV 304
L + I ++ EM Y +L+ LG + R A ++ ++ PD V
Sbjct: 434 LPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFDLL------PDDQKGVA 487
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
Y +LMD Y KA + M +R P + +Y+++++GL K
Sbjct: 488 AYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGLEK 533
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 139/287 (48%), Gaps = 20/287 (6%)
Query: 80 LSHQMEFTGIKPSLVTMNILINCYCHLGQ--INSAFSVLAGILKRGYQPDTITFTTLIKG 137
+ + +E G+ + N LI+CY G + A + + +R DT+++ +++ G
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGG 194
Query: 138 LCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPD 197
L G+++ A + D++ + +S+ T+++G + E S A EL ++ R +
Sbjct: 195 LVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPER----N 246
Query: 198 VVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 257
V ++T++ K + A ++ +M + NVVT++ +I G+ G LK+A L+D
Sbjct: 247 TVSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEADRLVD 304
Query: 258 EMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN 317
+M + D ++ A + G + + +++ + + + N+L+D Y
Sbjct: 305 QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 318 EVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ KA DVFN + ++ D+ S+N +++GL EA+ L + M
Sbjct: 365 NLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 114/230 (49%), Gaps = 30/230 (13%)
Query: 140 LHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVV 199
LH +I R H+D+ L++ +S LC+ +T+ A+ + ++Q +P+V
Sbjct: 38 LHAQIIRR-NLHEDLHIAPKLISALS-------LCR--QTNLAVRVFNQVQ----EPNVH 83
Query: 200 MYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI---YGFCIVGQLKQAIGLL 256
+ N++I + ++ AF ++SEM G+ + TY L+ G + +K +
Sbjct: 84 LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI 143
Query: 257 DEMGLKNIDPDVYTYTILVDALGKEG--KVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC 314
+++GL + D+Y L+D + G VR+A + M ++ D V++NS++ G
Sbjct: 144 EKLGLSS---DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLV 196
Query: 315 LVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
E+ A+ +F+ M QR D+ S+N +++G + + +A L +M
Sbjct: 197 KAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKM 242
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 12/219 (5%)
Query: 142 GKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMY 201
G +++A +D+ + VS+ T+++GL G A+EL R++ GI+PD V +
Sbjct: 364 GNLKKAFDVFNDIPKKDL----VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF 419
Query: 202 NTIIDSLCKDKLVSHAFD-LYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
++ S L+ D YS + P V Y L+ VG+LK+AI ++ M
Sbjct: 420 IAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP 479
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP-DVVTYNSLMDGYCLVNEV 319
+ +P+V + L+ A +V AK +L ++K + P D Y+ L + Y +
Sbjct: 480 M---EPNVVIWGALLGACRMHNEVDIAKEVLDNLVK--LDPCDPGNYSLLSNIYAAAEDW 534
Query: 320 NKAQDVFNAMSQRG-ETPDVHSYNIIINGLCKIKMADEA 357
D+ + M G E P S + +G+ + + D++
Sbjct: 535 EGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKS 573
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 144/327 (44%), Gaps = 19/327 (5%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
P DA F++M ++ +N +++ VK+ A + M + +V+ N
Sbjct: 97 KPIDACKVFDQM----HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP----ERDVVSWN 148
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
++ Y G ++ A + G + + +F L+ ++Q Q H VL
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
GFL N V ++I+ K G+ +A +R D+ ++ T+I K + A
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESA----KRCFDEMTVKDIHIWTTLISGYAKLGDMEAA 264
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
L+ EM K N V+++ALI G+ G +A+ L +M + P+ +T++ + A
Sbjct: 265 EKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
+R K + MI+ V+P+ + +SL+D Y + ++ VF + D
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKH---D 377
Query: 338 VHSYNIIINGLCKIKMADEALNLLAEM 364
+N +I+ L + + +AL +L +M
Sbjct: 378 CVFWNTMISALAQHGLGHKALRMLDDM 404
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 8/225 (3%)
Query: 94 VTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDD 153
V+ LI Y G N A + ++ G +P+ TF++ + ++ + H
Sbjct: 277 VSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGY 336
Query: 154 VLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
++ N + +LI+ K G A+ + R K D V +NT+I +L + L
Sbjct: 337 MIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD---KHDCVFWNTMISALAQHGL 393
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKN-IDPDVYTYT 272
A + +M+ + PN T ++ G +++ + + M +++ I PD Y
Sbjct: 394 GHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYA 453
Query: 273 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN 317
L+D LG+ G +E + M +PD +N+++ G C ++
Sbjct: 454 CLIDLLGRAGCFKELMRKIEEM---PFEPDKHIWNAIL-GVCRIH 494
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 15/296 (5%)
Query: 46 FNRMLQMPSTPPIFE----FNKVLTSLVKTKHYSTAISLSHQMEFTGI-KPSLVTMNILI 100
F+ LQ P F+ FN +L + + + + + F G+ + +LV+ N +I
Sbjct: 230 FHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSII 289
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL 160
Y G A + +L G PD +TF ++I+ + G Q H V GF+
Sbjct: 290 TGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFV 349
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
+ L+N K G+ +A + ++ K D + + +I L + A +
Sbjct: 350 KDAAIVCALVNMYAKTGDAESAKKAFEDLE----KKDTIAWTVVIIGLASHGHGNEALSI 405
Query: 221 YSEMVAKG-ISPNVVTYSALIYGFCIVGQLKQAIGLLDEM-GLKNIDPDVYTYTILVDAL 278
+ M KG +P+ +TY ++Y +G +++ EM L ++P V Y +VD L
Sbjct: 406 FQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDIL 465
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
+ G+ EA+ ++ M VKP+V + +L++G C ++E + D +M E
Sbjct: 466 SRAGRFEEAERLVKTM---PVKPNVNIWGALLNG-CDIHENLELTDRIRSMVAEPE 517
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 132/325 (40%), Gaps = 20/325 (6%)
Query: 43 ISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINC 102
+S+ + + P ++ +N ++ + + A+ +M G P T ++
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 103 YCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLN 162
L I V ++K G++ + T L+ G++ L+ +D+ N
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQ----WN 172
Query: 163 QVSYGTLINGLCKLGETSAALELLRRIQGRGIKP-DVVMYNTIID-SLCKDKLVSHAFDL 220
V++G+LI+G S A+E R +Q G+K + +M + ++ CKD + F
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 221 YSEMVAKGISP--------NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYT 272
+ + G P NV+ ++LI + G L+ A L D M + + ++
Sbjct: 233 F--LQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTL----VSWN 286
Query: 273 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR 332
++ + G EA M M+ G+ PD VT+ S++ + Q + +S+
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT 346
Query: 333 GETPDVHSYNIIINGLCKIKMADEA 357
G D ++N K A+ A
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESA 371
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 139/335 (41%), Gaps = 20/335 (5%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
NP A+ + ML+ +P F F VL + + + + TG + ++
Sbjct: 87 NPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVST 146
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
L++ Y G++N V I Q + + + +LI G + + A++ ++ +
Sbjct: 147 CLLHMYMCCGEVNYGLRVFEDIP----QWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKP--------DVVMYNTIIDSLC 209
G N+ L+ + + +QG G P +V++ ++ID
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
K + A L+ M + +V+++++I G+ G ++A+ + +M I PD
Sbjct: 263 KCGDLRTARYLFDGMPER----TLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKV 318
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
T+ ++ A +G + +++ A + K G D +L++ Y + A+ F +
Sbjct: 319 TFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDL 378
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
E D ++ ++I GL +EAL++ M
Sbjct: 379 ----EKKDTIAWTVVIIGLASHGHGNEALSIFQRM 409
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 116/246 (47%), Gaps = 8/246 (3%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH 151
++V+ +++ Y G+ A + + + K +PD + +++ +++ H
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
V+ G + +L K G+ + A L +++ P+++++N +I K+
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKN 301
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTY 271
A D++ EM+ K + P+ ++ ++ I VG L+QA + + +G + DV+
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQ 331
+ L+D K G V A+ ++ + + DVV +++++ GY L +A ++ AM +
Sbjct: 362 SALIDMFAKCGSVEGAR----LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 332 RGETPD 337
G P+
Sbjct: 418 GGVHPN 423
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 131/300 (43%), Gaps = 16/300 (5%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P IF +N ++ + H+ A+ + M+ + P T L+ L + V
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 116 LAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ---VSYGTLING 172
A + + G+ D LI L+ K +R + +G L + VS+ +++
Sbjct: 142 HAQVFRLGFDADVFVQNGLI---ALYAKCRRLGSAR--TVFEGLPLPERTIVSWTAIVSA 196
Query: 173 LCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKG--IS 230
+ GE ALE+ +++ +KPD V +++++ + + +++ +V G I
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 231 PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNM 290
P+++ +Y C GQ+ A L D+M P++ + ++ K G REA +M
Sbjct: 257 PDLLISLNTMYAKC--GQVATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAIDM 310
Query: 291 LAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
MI + V+PD ++ S + V + +A+ ++ + + DV + +I+ K
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 7/222 (3%)
Query: 91 PSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQF 150
P+L+ N +I+ Y G A + ++ + +PDTI+ T+ I G +++A
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
Query: 151 HDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCK 210
++ V + + LI+ K G A R + R + DVV+++ +I
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGA----RLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 211 DKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
A LY M G+ PN VT+ L+ G +++ + M I+P
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQH 461
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
Y ++D LG+ G + +A ++ M V+P V + +L+
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCM---PVQPGVTVWGALLSA 500
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 129/310 (41%), Gaps = 32/310 (10%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
++T L+ I+ + Q+ +P + N +I Y A + + +
Sbjct: 55 LITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 124 YQPDTITFTTLIK----------GLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
PD+ TF L+K G +H ++ R L F DV Q L+ L
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR-LGFDADVFVQNGLI------ALYAKC 167
Query: 174 CKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
+LG E L + +V + I+ + ++ A +++S+M + P+
Sbjct: 168 RRLGSARTVFEGLPLPE-----RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDW 222
Query: 234 VTYSALIYGFCIVGQLKQAIGL---LDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNM 290
V +++ F + LKQ + + +MGL+ I+PD+ L K G+V AK
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLE-IEPDLLIS--LNTMYAKCGQVATAK-- 277
Query: 291 LAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
++ + P+++ +N+++ GY +A D+F+ M + PD S I+ +
Sbjct: 278 --ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 351 IKMADEALNL 360
+ ++A ++
Sbjct: 336 VGSLEQARSM 345
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 142/328 (43%), Gaps = 13/328 (3%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
P ++ + RML + + F +L + + + Q+ G + + +N
Sbjct: 95 EPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVN 154
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
LIN Y G F + + R +PD +++ ++IKG GK+ AL + +
Sbjct: 155 SLINSYAVTGN----FKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
N +S+ T+I+G + AL+L +Q ++PD V + + + +
Sbjct: 211 ----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
++S + I + V LI + G++++A+ + + K+ V +T L+
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS----VQAWTALISG 322
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE-TP 336
G REA + M K G+KP+V+T+ +++ V + + +F +M + P
Sbjct: 323 YAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP 382
Query: 337 DVHSYNIIINGLCKIKMADEALNLLAEM 364
+ Y I++ L + + DEA + EM
Sbjct: 383 TIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 121/283 (42%), Gaps = 13/283 (4%)
Query: 83 QMEFTGI-KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLH 141
Q+ F G +P N++I + + + + +L + TF +L+K
Sbjct: 69 QIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNL 128
Query: 142 GKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMY 201
+ Q H + G+ + + +LIN G A L RI +PD V +
Sbjct: 129 SAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP----EPDDVSW 184
Query: 202 NTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGL 261
N++I K + A L+ +M K N ++++ +I G+ K+A+ L EM
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQN 240
Query: 262 KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNK 321
+++PD + + A + G + + K + + + K ++ D V L+D Y E+ +
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300
Query: 322 AQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
A +VF + ++ V ++ +I+G EA++ EM
Sbjct: 301 ALEVFKNIKKKS----VQAWTALISGYAYHGHGREAISKFMEM 339
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 19/219 (8%)
Query: 87 TGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQR 146
T I+ V +LI+ Y G++ A V I K+ Q +T LI G HG +
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHGHGRE 331
Query: 147 ALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQ-GRGIKPDVVMYNTII 205
A+ ++ G N +++ ++ G + ++ +KP + Y I+
Sbjct: 332 AISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIV 391
Query: 206 DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG--LKN 263
D L + L+ A EM K PN V + AL+ C ++ + I L +E+G L
Sbjct: 392 DLLGRAGLLDEAKRFIQEMPLK---PNAVIWGALLKA-C---RIHKNIELGEEIGEILIA 444
Query: 264 IDP---DVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
IDP Y + + A+ K K +A +M +QGV
Sbjct: 445 IDPYHGGRYVHKANIHAMDK--KWDKAAETRRLMKEQGV 481
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 41/288 (14%)
Query: 64 VLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRG 123
++++ K + + A+ + M G+KP+LV N LIN G++ F V + + G
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL-LNQVSYGTLINGLCKLGETSAA 182
++PD T+ L+ L + + LQ D + ++ LN+ Y T + KLG A
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 183 LELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYG 242
++LL ++G G+ YN +I + K +
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISACEKSR------------------------------ 439
Query: 243 FCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD 302
+ K A+ + + M ++ P+ +TY LV + E +++L + V+PD
Sbjct: 440 -----KSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDIL-----KKVEPD 489
Query: 303 VVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
V YN+ + G CL E A++++ M + G PD + +++ L K
Sbjct: 490 VSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 126/305 (41%), Gaps = 41/305 (13%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+K L L + +A+ L M F G++P+ N ++C G I AF+V +
Sbjct: 110 LSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMR 169
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
K+ + +T T Y ++ + ++
Sbjct: 170 KK----ENVTGHT--------------------------------YSLMLKAVAEVKGCE 193
Query: 181 AALELLRRIQGRGIKP---DVVMYNTIIDSLC-KDKLVSHAFDLYSEMVAKGISPNVVTY 236
+AL + R ++ + DVV+YNT I SLC + V ++ M G +TY
Sbjct: 194 SALRMFRELEREPKRRSCFDVVLYNTAI-SLCGRINNVYETERIWRVMKGDGHIGTEITY 252
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
S L+ F G+ + A+ + DEM I ++ A KE K A + M+K
Sbjct: 253 SLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLK 312
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADE 356
+G+KP++V N+L++ +V V++ + G PD +++N ++ L K ++
Sbjct: 313 KGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYED 372
Query: 357 ALNLL 361
L L
Sbjct: 373 VLQLF 377
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 155/347 (44%), Gaps = 49/347 (14%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHL-GQINSAFSV--LA 117
++ +L ++ + K +A+ + ++E + S + +L N L G+IN+ + +
Sbjct: 179 YSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDV-VLYNTAISLCGRINNVYETERIW 237
Query: 118 GILK-RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKL 176
++K G+ IT++ L+ G+ + AL +D+++ L + + +I+ K
Sbjct: 238 RVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKE 297
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTY 236
+ AL++ + + +G+KP++V NT+I+SL K V F +YS + + G P+ T+
Sbjct: 298 EKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTW 357
Query: 237 SALIYGF----------------------CI--------------VGQLKQAIGLLDEMG 260
+AL+ C+ +G ++A+ LL EM
Sbjct: 358 NALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEME 417
Query: 261 LKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVN 320
+ +Y +++ A K K + A + M ++ KP+ TY SL+ + +
Sbjct: 418 GSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWD 477
Query: 321 KAQDVFNAMSQRGETPDVHSYNIIINGLC---KIKMADEALNLLAEM 364
+ +D+ + PDV YN I+G+C + K A E + EM
Sbjct: 478 EVEDILKKVE-----PDVSLYNAAIHGMCLRREFKFAKELYVKMREM 519
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 155/355 (43%), Gaps = 40/355 (11%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMN 97
N GD + +R+ +N ++ L K+ +S +I L +M +G++ T +
Sbjct: 141 NCGD-LKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS 199
Query: 98 ILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQ 157
+ + L ++ + ILK G+ +L+ + ++ A + D++ +
Sbjct: 200 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS-- 215
+ +S+ ++ING G L + ++ GI+ D+ ++ +L+S
Sbjct: 260 ----DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 216 ---HA-----------------FDLYSEM----VAKGI-----SPNVVTYSALIYGFCIV 246
H+ D+YS+ AK + +VV+Y+++I G+
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
G +A+ L +EM + I PDVYT T +++ + + E K + + + + D+
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
N+LMD Y + +A+ VF+ M D+ S+N II G K A+EAL+L
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEM----RVKDIISWNTIIGGYSKNCYANEALSLF 486
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 121/299 (40%), Gaps = 10/299 (3%)
Query: 54 STPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAF 113
S + + ++ + A+ L +ME GI P + T+ ++NC ++
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 114 SVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGL 173
V I + D L+ G +Q A + V ++ + + +S+ T+I G
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA----ELVFSEMRVKDIISWNTIIGGY 473
Query: 174 CKLGETSAALELLR-RIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPN 232
K + AL L ++ + PD ++ + +++ ++ G +
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 533
Query: 233 VVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLA 292
++L+ + G L A L D++ K D+ ++T+++ G G +EA +
Sbjct: 534 RHVANSLVDMYAKCGALLLAHMLFDDIASK----DLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 293 VMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE-TPDVHSYNIIINGLCK 350
M + G++ D +++ SL+ V++ FN M + P V Y I++ L +
Sbjct: 590 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 247 GQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
G +IGL +M ++ D YT++ + + V + + ++K G
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
NSL+ Y V+ A+ VF+ M++R DV S+N IING +A++ L++ +M
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYVSNGLAEKGLSVFVQM 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 99/235 (42%), Gaps = 9/235 (3%)
Query: 93 LVTMNILINCYCHLGQINSAFSVLAGILK-RGYQPDTITFTTLIKGLCLHGKIQRALQFH 151
+++ N +I Y N A S+ +L+ + + PD T ++ + + H
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 522
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
++ G+ ++ +L++ K G A L I + D+V + +I
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK----DLVSWTVMIAGYGMH 578
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLK-NIDPDVYT 270
A L+++M GI + +++ +L+Y G + + + M + I+P V
Sbjct: 579 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDV 325
Y +VD L + G + +A + M + PD + +L+ G + ++V A+ V
Sbjct: 639 YACIVDMLARTGDLIKAYRFIENM---PIPPDATIWGALLCGCRIHHDVKLAEKV 690
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 12/275 (4%)
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ 149
+P+L+ N + + SA + ++ G P++ TF ++K + Q
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
H VL G L+ + +LI+ + G A ++ + R DVV Y +I
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYA 211
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVY 269
+ +A L+ E+ K +VV+++A+I G+ G K+A+ L +M N+ PD
Sbjct: 212 SRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 270 TYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM 329
T +V A + G + + + + G ++ N+L+D Y E+ A +F +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 330 SQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ DV S+N +I G + + EAL L EM
Sbjct: 328 PYK----DVISWNTLIGGYTHMNLYKEALLLFQEM 358
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 10/247 (4%)
Query: 93 LVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHD 152
+V+ N +I+ Y G A + ++K +PD T T++ G I+ Q H
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290
Query: 153 DVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDK 212
+ GF N LI+ K GE A L R+ + DV+ +NT+I
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMN 346
Query: 213 LVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLK--QAIGLLDEMGLKNIDPDVYT 270
L A L+ EM+ G +PN VT +++ +G + + I + + LK +
Sbjct: 347 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 406
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
T L+D K G + A + ++ + + ++N+++ G+ + + + D+F+ M
Sbjct: 407 RTSLIDMYAKCGDIEAAHQVFNSILHKSLS----SWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 331 QRGETPD 337
+ G PD
Sbjct: 463 KIGIQPD 469
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 118/281 (41%), Gaps = 19/281 (6%)
Query: 38 NPGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFT----GIKPSL 93
N +A+ F M++ P + ++V S +I L Q+ G +L
Sbjct: 246 NYKEALELFKDMMKTNVRPD----ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNL 301
Query: 94 VTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDD 153
+N LI+ Y G++ +A G+ +R D I++ TLI G + AL +
Sbjct: 302 KIVNALIDLYSKCGELETA----CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQE 357
Query: 154 VLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGR--GIKPDVVMYNTIIDSLCKD 211
+L G N V+ +++ LG + I R G+ + ++ID K
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTY 271
+ A +++ ++ K +S +++A+I+GF + G+ + L M I PD T+
Sbjct: 418 GDIEAAHQVFNSILHKSLS----SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 272 TILVDALGKEGKVREAKNMLAVMIKQ-GVKPDVVTYNSLMD 311
L+ A G + +++ M + + P + Y ++D
Sbjct: 474 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 514
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 8/222 (3%)
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ 149
+P L T N L+ Y + +I+S VL ++ +P+ ++ LIK G+ R +
Sbjct: 178 EPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVW 237
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
H VL LNQ +LI+ K G S A ++ + R DV YN +I L
Sbjct: 238 AHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQR----DVSCYNAMIRGLA 293
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM-GLKNIDPDV 268
+LY ++++G+ P+ T+ I G + + + + + M + I+P V
Sbjct: 294 VHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKV 353
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
Y LVD LG+ G++ EA+ + K VKP+ + S +
Sbjct: 354 EHYGCLVDLLGRSGRLEEAEECIK---KMPVKPNATLWRSFL 392
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 127/308 (41%), Gaps = 19/308 (6%)
Query: 68 LVKTKHYSTAISLSHQMEFTG--IKPSLVTMNILINCYC---HLGQINSAFSVLAGILKR 122
L K H S+ + LS+ + PS+ N LI+ + Q + AFS+ IL
Sbjct: 44 LSKLLHLSSTVCLSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSS 103
Query: 123 G---YQPDTITFTTLIKGLCLHGKIQR---ALQFHDDVLAQGFLLNQVSYGTLINGLCKL 176
+P+ T+ +L K + R AL H + ++ L+
Sbjct: 104 RSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANC 163
Query: 177 GETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTY 236
G+ A L RI+ +PD+ +NT++ + + + ++ + + PN ++
Sbjct: 164 GKLREARSLFERIR----EPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSL 219
Query: 237 SALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIK 296
ALI +G+ + + + N+ + + T L+D K G + A+ + M +
Sbjct: 220 VALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQ 279
Query: 297 QGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADE 356
+ DV YN+++ G + + +++ ++ +G PD ++ + I+ + DE
Sbjct: 280 R----DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDE 335
Query: 357 ALNLLAEM 364
L + M
Sbjct: 336 GLQIFNSM 343
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 6/201 (2%)
Query: 93 LVTMNILINCYCHLGQINSAFSVLAGILKRGYQ-PDTITFTTLIKGLCLHGKIQRALQFH 151
+V+ N ++ Y H+G N V +L + PD T +++ G + + H
Sbjct: 268 VVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH 327
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
+ G + L++ K G+ ALE+ R R DV +N+II L
Sbjct: 328 VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR----DVSTWNSIISDLSVH 383
Query: 212 KLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM-GLKNIDPDVYT 270
L A +++SEMV +G PN +T+ ++ VG L QA L + M + ++P +
Sbjct: 384 GLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEH 443
Query: 271 YTILVDALGKEGKVREAKNML 291
Y +VD LG+ GK+ EA+ ++
Sbjct: 444 YGCMVDLLGRMGKIEEAEELV 464
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 139/332 (41%), Gaps = 44/332 (13%)
Query: 65 LTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGY 124
L + T +S +H + P+ T N +I Y + A +V +L
Sbjct: 77 LVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPV 136
Query: 125 QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALE 184
PD +FT ++K + Q H + G + + TL+N + G A +
Sbjct: 137 FPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARK 196
Query: 185 LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
+L R+ R D V +N+++ + + LV A L+ EM + NV +++ +I G+
Sbjct: 197 VLDRMPVR----DAVSWNSLLSAYLEKGLVDEARALFDEMEER----NVESWNFMISGYA 248
Query: 245 IVGQLKQAIGLLDEMGLKNI--------------------------------DPDVYTYT 272
G +K+A + D M ++++ PD +T
Sbjct: 249 AAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLV 308
Query: 273 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR 332
++ A G + + + + + K G++ + +L+D Y +++KA +VF A S+R
Sbjct: 309 SVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR 368
Query: 333 GETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
DV ++N II+ L + +AL + +EM
Sbjct: 369 ----DVSTWNSIISDLSVHGLGKDALEIFSEM 396
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 146/360 (40%), Gaps = 47/360 (13%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
P A++ F ML P P + F VL + + + +G+ + N
Sbjct: 121 PEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENT 180
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
L+N Y G F + +L R D +++ +L+ G + A D++ +
Sbjct: 181 LVNVYGRSGY----FEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEER- 235
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
N S+ +I+G G A E+ + R DVV +N ++ + +
Sbjct: 236 ---NVESWNFMISGYAAAGLVKEAKEVFDSMPVR----DVVSWNAMVTAYAHVGCYNEVL 288
Query: 219 DLYSEMVAKGIS-PNVVTYSALIYGFCIVGQLKQAIGL---LDEMGLK------------ 262
+++++M+ P+ T +++ +G L Q + +D+ G++
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 263 -----NIDP-----------DVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 306
ID DV T+ ++ L G ++A + + M+ +G KP+ +T+
Sbjct: 349 YSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITF 408
Query: 307 NSLMDGYCLVNEVNKAQDVFNAMSQ--RGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ V +++A+ +F MS R E P + Y +++ L ++ +EA L+ E+
Sbjct: 409 IGVLSACNHVGMLDQARKLFEMMSSVYRVE-PTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 7/278 (2%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH 151
S VT N + + +SV+ + GY D T+ + + + ++ +
Sbjct: 262 STVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLY 321
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELL----RRIQGRGIKPDVVMYNTIIDS 207
+ ++ F + L+ L G + L+L+ R+ + G +Y+ I S
Sbjct: 322 EYMMDGPFKPSIQDCSLLLRYLS--GSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRS 379
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
L A ++ M G P+ +TYS L++G C +L++A G+LD+M + PD
Sbjct: 380 LTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPD 439
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
+ T+TIL+ K ++ +A A M+++G D + L+DG+ + N+ A
Sbjct: 440 IKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLM 499
Query: 328 AMSQRGET-PDVHSYNIIINGLCKIKMADEALNLLAEM 364
M + P +Y ++I+ L KIK ++EAL+LL M
Sbjct: 500 EMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMM 537
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 7/235 (2%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
++ + SL + A ++ M G +P +T + L+ C ++ A VL +
Sbjct: 373 YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQME 432
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGE-T 179
+G PD T+T LI+G C + ++ +AL ++L +GF ++ LI+G +
Sbjct: 433 AQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFE 492
Query: 180 SAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSAL 239
A++ L+ ++ +KP Y +ID L K K A DL M + N Y+
Sbjct: 493 GASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQ----NYPAYAEA 548
Query: 240 IYGF-CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAV 293
G+ G L+ A LD + K+ P Y +++A +EG++ +AKN+L +
Sbjct: 549 FDGYLAKFGTLEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREGRLTDAKNLLFI 602
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 51/294 (17%)
Query: 69 VKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDT 128
V K+ ST SLS + + GI SL + +G+ + A + + GY+PD
Sbjct: 357 VSRKYESTGKSLSKAV-YDGIHRSLTS----------VGRFDEAEEITKAMRNAGYEPDN 405
Query: 129 ITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRR 188
IT Y L+ GLCK A +L +
Sbjct: 406 IT-----------------------------------YSQLVFGLCKAKRLEEARGVLDQ 430
Query: 189 IQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQ 248
++ +G PD+ + +I CK+ + A ++ M+ KG + LI GF I +
Sbjct: 431 MEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNK 490
Query: 249 LKQA-IGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYN 307
+ A I L++ + N+ P TY +L+D L K K EA ++L +M KQ ++
Sbjct: 491 FEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFD 550
Query: 308 SLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
+ + + + K DV ++ ++P +Y +I + +A NLL
Sbjct: 551 GYLAKFGTLEDAKKFLDVLSS----KDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 146/331 (44%), Gaps = 23/331 (6%)
Query: 39 PGDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNI 98
PG A+ + +++ P + N VL ++ +SL +ME G+ P T
Sbjct: 59 PG-ALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTF 117
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
++ L ++ F+ +++ G+ + LI G + A + DD
Sbjct: 118 VLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKA- 176
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
++V++ ++ +G K G+ A+ L + + D V +N +I K K + A
Sbjct: 177 ---HKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSAR 229
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+L+ K +VVT++A+I G+ G K+A+G+ EM PDV T L+ A
Sbjct: 230 ELFDRFTEK----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSAC 285
Query: 279 GKEGKVREAKNM-LAVMIKQGVKPDVVT----YNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
G + K + + ++ V + +N+L+D Y +++A +VF + R
Sbjct: 286 AVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR- 344
Query: 334 ETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
D+ ++N +I GL + A+ ++ + EM
Sbjct: 345 ---DLSTWNTLIVGLA-LHHAEGSIEMFEEM 371
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 128/275 (46%), Gaps = 26/275 (9%)
Query: 51 QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQIN 110
+MP + +N ++T +K K +A L + FT + +VT N +I+ Y + G
Sbjct: 203 EMPYKDQV-AWNVMITGCLKCKEMDSARELFDR--FT--EKDVVTWNAMISGYVNCGYPK 257
Query: 111 SAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT-- 168
A + + G PD +T +L+ + G ++ + H +L + + + GT
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 169 ---LINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA---FDLYS 222
LI+ K G A+E+ R ++ R D+ +NT+I L + HA +++
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDR----DLSTWNTLIVGLA----LHHAEGSIEMFE 369
Query: 223 EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM-GLKNIDPDVYTYTILVDALGKE 281
EM + PN VT+ +I G++ + M + NI+P++ Y +VD LG+
Sbjct: 370 EMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRA 429
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLV 316
G++ EA + M ++P+ + + +L+ G C +
Sbjct: 430 GQLEEAFMFVESM---KIEPNAIVWRTLL-GACKI 460
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 133/300 (44%), Gaps = 22/300 (7%)
Query: 62 NKVLTSLV----KTKHYSTAISLSHQMEFT-GIKPSLVTMNILINCYCHLGQINSAFSVL 116
++V T+LV ++ + A +L +M+ + +P + T +ILI + + + +L
Sbjct: 185 HEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 244
Query: 117 AGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH---------DDVLAQGFLLNQVSYG 167
+ + ++G +P+TIT+ TLI +GK + ++ DD + +N
Sbjct: 245 SDMRRQGIRPNTITYNTLIDA---YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRA 301
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
NG ++ E + Q GI+P++ +N ++DS K + M
Sbjct: 302 FGGNGQIEMMEN-----CYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKY 356
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
S +VTY+ +I F G LKQ L M + I P T LV A G+ K +
Sbjct: 357 HYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKI 416
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIING 347
+L + ++ D+V +N L+D Y + + + + V M ++G PD +Y ++
Sbjct: 417 GGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKA 476
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 126/280 (45%), Gaps = 1/280 (0%)
Query: 56 PPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSV 115
P + ++ ++ S ++ + L M GI+P+ +T N LI+ Y S
Sbjct: 219 PDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMEST 278
Query: 116 LAGIL-KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLC 174
L +L + +PD+ T + ++ +G+I+ ++ + G N ++ L++
Sbjct: 279 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYG 338
Query: 175 KLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVV 234
K G ++ +Q +V YN +ID+ + + L+ M ++ I P+ V
Sbjct: 339 KSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCV 398
Query: 235 TYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
T +L+ + + + G+L + +I D+ + LVDA G+ K E K +L +M
Sbjct: 399 TLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELM 458
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE 334
K+G KPD +TY +++ Y + +++ + GE
Sbjct: 459 EKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVGE 498
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 142/318 (44%), Gaps = 6/318 (1%)
Query: 51 QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQIN 110
Q+ P + + K++ L K K A L +M G + L++ Y G+ +
Sbjct: 143 QLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFD 202
Query: 111 SAFSVLAGILKRGY--QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGT 168
+AF++L +K + QPD T++ LIK + D+ QG N ++Y T
Sbjct: 203 AAFTLLER-MKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNT 261
Query: 169 LINGLCKLGETSAALE--LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVA 226
LI+ K + +E L++ + KPD N+ + + + + + Y + +
Sbjct: 262 LIDAYGK-AKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQS 320
Query: 227 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVRE 286
GI PN+ T++ L+ + G K+ +++ M + + TY +++DA G+ G +++
Sbjct: 321 SGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQ 380
Query: 287 AKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
+ + +M + + P VT SL+ Y ++ +K V + D+ +N +++
Sbjct: 381 MEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVD 440
Query: 347 GLCKIKMADEALNLLAEM 364
+++ E +L M
Sbjct: 441 AYGRMEKFAEMKGVLELM 458
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
E+ ++++ G+ P+ V ++D LCKD LV A L+ M KG P VV Y+A++ F
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
C +++ A + +M I P+ ++Y +LV L + +A + M++ G P+V
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
T+ L+D C V V +AQ + ++Q+G
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + N V+ +++GLCK G A++L ++ +G P+VV+Y ++++ CK + A
Sbjct: 129 GLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
++ +M GI+PN +Y L+ G L A+ EM P+V T+ LVDA
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDA 245
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMD 311
L + V +A++ + + ++G +V MD
Sbjct: 246 LCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+++ +M G+ PN V A++ G C G +++A+ L M K P+V YT +V+A
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
K K+ +AK + M G+ P+ +Y L+ G N ++ A + M + G +P+V
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 339 HSYNIIINGLCKIKMADEA 357
++ +++ LC++K ++A
Sbjct: 237 PTFVELVDALCRVKGVEQA 255
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 133 TLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGR 192
++ GLC G +Q A++ + +G + V Y ++ CK + A + R++Q
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 193 GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQA 252
GI P+ Y ++ L ++ A SEM+ G SPNV T+ L+ C V ++QA
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 253 IGLLDEMGLK 262
+D + K
Sbjct: 256 QSAIDTLNQK 265
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%)
Query: 274 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
++D L K+G V+EA + +M +G P+VV Y ++++ +C +++ A+ +F M G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 334 ETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
P+ SY +++ GL M D+A+ +EM
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEM 227
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 83 QMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHG 142
+M+ G+ P+ V M ++ C G + A + + +G P+ + +T +++ C
Sbjct: 124 KMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAH 180
Query: 143 KIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYN 202
KI+ A + + G N SYG L+ GL A+ + G P+V +
Sbjct: 181 KIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFV 240
Query: 203 TIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
++D+LC+ K V A + KG + NV
Sbjct: 241 ELVDALCRVKGVEQAQSAIDTLNQKGFAVNV 271
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
E+ ++++ G+ P+ V ++D LCKD LV A L+ M KG P VV Y+A++ F
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
C +++ A + +M I P+ ++Y +LV L + +A + M++ G P+V
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
T+ L+D C V V +AQ + ++Q+G
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 158 GFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHA 217
G + N V+ +++GLCK G A++L ++ +G P+VV+Y ++++ CK + A
Sbjct: 129 GLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 218 FDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDA 277
++ +M GI+PN +Y L+ G L A+ EM P+V T+ LVDA
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDA 245
Query: 278 LGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMD 311
L + V +A++ + + ++G +V MD
Sbjct: 246 LCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
+++ +M G+ PN V A++ G C G +++A+ L M K P+V YT +V+A
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
K K+ +AK + M G+ P+ +Y L+ G N ++ A + M + G +P+V
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 339 HSYNIIINGLCKIKMADEA 357
++ +++ LC++K ++A
Sbjct: 237 PTFVELVDALCRVKGVEQA 255
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 133 TLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGR 192
++ GLC G +Q A++ + +G + V Y ++ CK + A + R++Q
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 193 GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQA 252
GI P+ Y ++ L ++ A SEM+ G SPNV T+ L+ C V ++QA
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 253 IGLLDEMGLK 262
+D + K
Sbjct: 256 QSAIDTLNQK 265
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%)
Query: 274 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
++D L K+G V+EA + +M +G P+VV Y ++++ +C +++ A+ +F M G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 334 ETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
P+ SY +++ GL M D+A+ +EM
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEM 227
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 83 QMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHG 142
+M+ G+ P+ V M ++ C G + A + + +G P+ + +T +++ C
Sbjct: 124 KMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAH 180
Query: 143 KIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYN 202
KI+ A + + G N SYG L+ GL A+ + G P+V +
Sbjct: 181 KIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFV 240
Query: 203 TIIDSLCKDKLVSHAFDLYSEMVAKGISPNV 233
++D+LC+ K V A + KG + NV
Sbjct: 241 ELVDALCRVKGVEQAQSAIDTLNQKGFAVNV 271
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 146/352 (41%), Gaps = 48/352 (13%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKH-YSTAISLSHQMEFTGIKPSLVTMNILINCYCHLG 107
+ + P + FN ++ L T + + A+SL +M+F+G+KP T N + L
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 108 QINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYG 167
+I SV + + K G + D +LI G++ A + D++ + + VS+
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER----DTVSWN 202
Query: 168 TLINGLCKLGETSAALELLRRIQGRGIKPD--------------------------VVMY 201
++I+G + G A++L R+++ G +PD +
Sbjct: 203 SMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK 262
Query: 202 NTIIDSLCKDKLVS---------HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQA 252
+ + KL+S A ++++M+ K + V ++A+I + G+ +A
Sbjct: 263 KIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEA 318
Query: 253 IGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDG 312
L EM + PD T + ++ A G G + K + + ++ ++ L+D
Sbjct: 319 FKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDM 378
Query: 313 YCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
Y V +A VF AM + E ++N +I A EAL L M
Sbjct: 379 YGKCGRVEEALRVFEAMPVKNEA----TWNAMITAYAHQGHAKEALLLFDRM 426
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 125/301 (41%), Gaps = 41/301 (13%)
Query: 94 VTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLH-GKIQRALQFHD 152
V+ N +I+ Y G A + + + G++PD T +++ G C H G ++ +
Sbjct: 199 VSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSML-GACSHLGDLRTGRLLEE 257
Query: 153 DVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDK 212
+ + L+ LI+ K G+ +A RR+ + IK D V + +I ++
Sbjct: 258 MAITKKIGLSTFLGSKLISMYGKCGDLDSA----RRVFNQMIKKDRVAWTAMITVYSQNG 313
Query: 213 LVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL---KQAIGLLDEMGLKNIDPDVY 269
S AF L+ EM G+SP+ T S ++ VG L KQ E+ L++ ++Y
Sbjct: 314 KSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH---NIY 370
Query: 270 TYTILVDALGKEGKVRE----------------------------AKNMLAVMIKQGVKP 301
T LVD GK G+V E AK L + + V P
Sbjct: 371 VATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPP 430
Query: 302 DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQR-GETPDVHSYNIIINGLCKIKMADEALNL 360
+T+ ++ V++ F+ MS G P + Y II+ L + M DEA
Sbjct: 431 SDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEF 490
Query: 361 L 361
+
Sbjct: 491 M 491
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 106/277 (38%), Gaps = 11/277 (3%)
Query: 89 IKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL 148
IK V +I Y G+ + AF + + K G PD T +T++ G ++
Sbjct: 295 IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 354
Query: 149 QFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSL 208
Q N L++ K G E LR + +K + +N +I +
Sbjct: 355 QIETHASELSLQHNIYVATGLVDMYGKCGRVE---EALRVFEAMPVKNEAT-WNAMITAY 410
Query: 209 CKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG-LKNIDPD 267
A L+ M + P+ +T+ ++ G + Q EM + + P
Sbjct: 411 AHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPK 467
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
+ YT ++D L + G + EA M + KPD + +++ +V +
Sbjct: 468 IEHYTNIIDLLSRAGMLDEA---WEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMR 524
Query: 328 AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+ + E + +Y I N L +KM DE+ + A M
Sbjct: 525 MLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALM 561
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 6/161 (3%)
Query: 193 GIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI---VGQL 249
GI+PD+ YN +I LC+ S ++ + +EM K I P ++ +I GF ++
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 250 KQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSL 309
++ + ++DE G + V TY I++ L K K EAK ++ ++ ++P+ VTY+ L
Sbjct: 237 RKVMRMMDEFG---VHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLL 293
Query: 310 MDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
+ G+C +++A ++F M G PD Y +I+ LCK
Sbjct: 294 IHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCK 334
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Query: 123 GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAA 182
G +PD T+ +I+ LC G + ++ + S+G +I+G K +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 183 LELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYG 242
+++R + G+ V YN +I LCK K + A L +++ + PN VTYS LI+G
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 243 FCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD 302
FC L +A+ L + M PD Y L+ L K G A + +++ P
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 303 VVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
L++G ++V++A+++ + ++ T +V +N + L
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELIAVVKEKF-TRNVDLWNEVEAAL 401
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%)
Query: 165 SYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM 224
+Y +I LC+ G TS++ ++ ++ + IKP + +ID K++ + M
Sbjct: 184 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 243
Query: 225 VAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV 284
G+ V TY+ +I C + +A L+D + + P+ TY++L+ E +
Sbjct: 244 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 303
Query: 285 REAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNII 344
EA N+ VM+ G KPD Y +L+ C + A + ++ P +
Sbjct: 304 DEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWL 363
Query: 345 INGLCKIKMADEALNLLA 362
+NGL DEA L+A
Sbjct: 364 VNGLASRSKVDEAKELIA 381
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 8/227 (3%)
Query: 47 NRM-LQMPS----TPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
NR+ L+MP P + +N+++ L ++ S++ S+ +ME IKP+ + ++I+
Sbjct: 166 NRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMID 225
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
+ + + V+ + + G T+ +I+ LC K A D V++
Sbjct: 226 GFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRP 285
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N V+Y LI+G C A+ L + G KPD Y T+I LCK A L
Sbjct: 286 NSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILC 345
Query: 222 SEMVAKGISPNVVTYSALIYGFCI---VGQLKQAIGLLDEMGLKNID 265
E + K P+ L+ G V + K+ I ++ E +N+D
Sbjct: 346 RESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVD 392
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 12/252 (4%)
Query: 120 LKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQ---VSYGTLINGLCKL 176
L Y D I F+ + L Q D GF+ NQ S + +
Sbjct: 67 LSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLD-----GFIQNQPDPKSESFAVRAIILY 121
Query: 177 GETS---AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK-GISPN 232
G + +++ R ++ I V N ++ + K A +Y EM GI P+
Sbjct: 122 GRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPD 181
Query: 233 VVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLA 292
+ TY+ +I C G + ++ EM K I P ++ +++D KE K E + ++
Sbjct: 182 LETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMR 241
Query: 293 VMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIK 352
+M + GV V TYN ++ C + +A+ + + + P+ +Y+++I+G C +
Sbjct: 242 MMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEE 301
Query: 353 MADEALNLLAEM 364
DEA+NL M
Sbjct: 302 NLDEAMNLFEVM 313
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 145/326 (44%), Gaps = 15/326 (4%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
+A+ F M + P F ++ +L+ + + Q G + S N L+
Sbjct: 308 EAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALV 367
Query: 101 NCY--CHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
+ Y C ++ ++ V ++ P+ +++TTLI GL HG +Q +++ +
Sbjct: 368 DMYMKCSASEVEAS-RVFGAMV----SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
N V+ ++ KL LE+ + R + ++V+ N+++D+ + V +A+
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
++ M + + +TY++L+ F +G+ + A+ +++ M I D + + A
Sbjct: 483 NVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDV 338
G + K++ +K G NSL+D Y + A+ VF ++ TPDV
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA----TPDV 594
Query: 339 HSYNIIINGLCKIKMADEALNLLAEM 364
S+N +++GL AL+ EM
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEM 620
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 147/331 (44%), Gaps = 24/331 (7%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
A+S F M+ + P F F+ V+ S + S + + TG + + V + L
Sbjct: 106 ASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSL 165
Query: 100 INCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGF 159
+ Y GQ A + + + DTI++T +I L K + ALQF+ +++ G
Sbjct: 166 SDLYSKCGQFKEACELFSSL----QNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQG----RGIKPDVVMYNTIIDSLCKDKLVS 215
N+ ++ L+ LG LE + I RGI +VV+ +++D + S
Sbjct: 222 PPNEFTFVKLLGASSFLG-----LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQ---FS 273
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
D + + G +V +++++ GF + K+A+G EM + P+ +TY+ ++
Sbjct: 274 KMEDAVRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY--CLVNEVNKAQDVFNAMSQRG 333
+ K + + IK G + N+L+D Y C +EV +A VF AM
Sbjct: 333 SLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEV-EASRVFGAMV--- 388
Query: 334 ETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+P+V S+ +I GL + LL EM
Sbjct: 389 -SPNVVSWTTLILGLVDHGFVQDCFGLLMEM 418
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 14/288 (4%)
Query: 62 NKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILK 121
N +L+ +KT A L +M ++ ++I+ + + SA S+ ++
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMS----HRTVFAWTVMISAFTKSQEFASALSLFEEMMA 117
Query: 122 RGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
G P+ TF+++++ I + H V+ GF N V +L + K G+
Sbjct: 118 SGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKE 177
Query: 182 ALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIY 241
A EL +Q D + + +I SL + A YSEMV G+ PN T+ L+
Sbjct: 178 ACELFSSLQ----NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLG 233
Query: 242 GFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKP 301
+G L+ + + ++ I +V T LVD + K+ +A +L +Q
Sbjct: 234 ASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ---- 288
Query: 302 DVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLC 349
DV + S++ G+ +A F M G P+ +Y+ I++ LC
Sbjct: 289 DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS-LC 335
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 150/337 (44%), Gaps = 46/337 (13%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+ +++SLV + + A+ +M G+ P+ T L+ LG + ++ + I+
Sbjct: 193 WTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNII 251
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
RG + + T+L+ K++ A++ + Q L + ++++G +
Sbjct: 252 VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFL----WTSVVSGFVRNLRAK 307
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCK------------DKLVSHAF---------- 218
A+ ++ G++P+ Y+ I+ SLC + + F
Sbjct: 308 EAVGTFLEMRSLGLQPNNFTYSAIL-SLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNAL 366
Query: 219 -DLY----------SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
D+Y S + +SPNVV+++ LI G G ++ GLL EM + ++P+
Sbjct: 367 VDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPN 426
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
V T + ++ A K VR + A ++++ V ++V NSL+D Y +V+ A +V
Sbjct: 427 VVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIR 486
Query: 328 AMSQRGETPDVHSYNIII---NGLCKIKMADEALNLL 361
+M +R D +Y ++ N L K +MA +N +
Sbjct: 487 SMKRR----DNITYTSLVTRFNELGKHEMALSVINYM 519
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/417 (18%), Positives = 164/417 (39%), Gaps = 93/417 (22%)
Query: 41 DAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILI 100
D I + ++ S +F + ++++ K++ +++A+SL +M +G P+ T + ++
Sbjct: 72 DGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVV 131
Query: 101 NCYCHLGQINSAFSVLAGILKRGYQ-------------------------------PDTI 129
L I+ V ++K G++ DTI
Sbjct: 132 RSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTI 191
Query: 130 TFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG------------ 177
++T +I L K + ALQF+ +++ G N+ ++ L+ LG
Sbjct: 192 SWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNII 251
Query: 178 ----------ETS--------AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFD 219
+TS + +E R+ + DV ++ +++ ++ A
Sbjct: 252 VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVG 311
Query: 220 LYSEMVAKGISPNVVTYSALIYGFCIVGQL---KQ------AIGLLDEMGLKN------- 263
+ EM + G+ PN TYSA++ V L KQ +G D + N
Sbjct: 312 TFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYM 371
Query: 264 ----------------IDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYN 307
+ P+V ++T L+ L G V++ +L M+K+ V+P+VVT +
Sbjct: 372 KCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLS 431
Query: 308 SLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ + V + ++ + +R ++ N +++ + D A N++ M
Sbjct: 432 GVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 134/313 (42%), Gaps = 43/313 (13%)
Query: 49 MLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQ 108
M++ P + + VL + K +H + + + + +V N L++ Y +
Sbjct: 418 MVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRK 477
Query: 109 INSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSY-- 166
++ A++V+ + +R D IT+T+L+ GK + AL + + G ++Q+S
Sbjct: 478 VDYAWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPG 533
Query: 167 -----------------------------GTLINGLCKLGETSAALELLRRIQGRGIKPD 197
+++N L + +LE +++ PD
Sbjct: 534 FISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPD 593
Query: 198 VVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 257
VV +N ++ L + +S A + EM K P+ VT+ L+ C G+L +GL
Sbjct: 594 VVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA-CSNGRLTD-LGLEY 651
Query: 258 EMGLK---NIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYC 314
+K NI+P V Y LV LG+ G++ EA ++ M +KP+ + + +L+
Sbjct: 652 FQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETM---HLKPNAMIFKTLLRACR 708
Query: 315 LVNEVNKAQDVFN 327
++ +D+ N
Sbjct: 709 YRGNLSLGEDMAN 721
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 51/269 (18%)
Query: 97 NILINCYCHLGQINSAFSVLAGILKRG-YQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
N +I Y Q +F++ + K + PD TFTTL K L + + LQ H +
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
GF + +++ K G+ A
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCA--------------------------------R 133
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILV 275
+AFD EM + + V+++ALI G+ G+L A L D+M DV Y ++
Sbjct: 134 NAFD---EMPHR----SEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMM 183
Query: 276 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET 335
D K G + A+ + M + V +T+ +++ GYC + +++ A+ +F+AM +R
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHKTV----ITWTTMIHGYCNIKDIDAARKLFDAMPER--- 236
Query: 336 PDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ S+N +I G C+ K E + L EM
Sbjct: 237 -NLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 17/247 (6%)
Query: 92 SLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFH 151
S V+ LI+ Y G+++ A + + + D + + ++ G G + A +
Sbjct: 143 SEVSWTALISGYIRCGELDLASKLFDQM---PHVKDVVIYNAMMDGFVKSGDMTSARRLF 199
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
D++ + +++ T+I+G C + + AA +L + R ++V +NT+I C++
Sbjct: 200 DEMTHKTV----ITWTTMIHGYCNIKDIDAARKLFDAMPER----NLVSWNTMIGGYCQN 251
Query: 212 KLVSHAFDLYSEMVA-KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYT 270
K L+ EM A + P+ VT +++ G L + K +D V
Sbjct: 252 KQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKV 311
Query: 271 YTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMS 330
T ++D K G++ +AK + M ++ V ++N+++ GY L A D+F M
Sbjct: 312 CTAILDMYSKCGEIEKAKRIFDEMPEK----QVASWNAMIHGYALNGNARAALDLFVTMM 367
Query: 331 QRGETPD 337
E PD
Sbjct: 368 IE-EKPD 373
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 118/265 (44%), Gaps = 12/265 (4%)
Query: 99 LINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQG 158
LI+ Y G++ +A V + + G Q D + F +I G + + AL D+ G
Sbjct: 158 LIDMYSKFGEVGNARKVFSDL---GEQ-DLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 159 FLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAF 218
+ +++ LI+G + E+L + G KPDVV + +II L + AF
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 219 DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDAL 278
D + +M+ G+ PN T L+ + +K + + ++ + + L+D
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 279 GKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE--VNKAQDVFNAMSQRGETP 336
GK G + EA ++ ++ K VT+NS++ +C N +KA ++F+ M GE
Sbjct: 334 GKCGFISEA----MILFRKTPKKTTVTFNSMI--FCYANHGLADKAVELFDQMEATGEKL 387
Query: 337 DVHSYNIIINGLCKIKMADEALNLL 361
D ++ I+ + D NL
Sbjct: 388 DHLTFTAILTACSHAGLTDLGQNLF 412
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 45/287 (15%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
FN +++ A++L M+ GIKP ++T N LI+ + H+ +L +
Sbjct: 186 FNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC 245
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS--------------- 165
GY+PD +++T++I GL + + ++A +L G N +
Sbjct: 246 LDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMK 305
Query: 166 YGTLINGLC--------------------KLGETSAALELLRRIQGRGIKPDVVMYNTII 205
+G I+G K G S A+ L R+ K V +N++I
Sbjct: 306 HGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP----KKTTVTFNSMI 361
Query: 206 DSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVG--QLKQAIGLLDEMGLKN 263
L A +L+ +M A G + +T++A++ G L Q + LL + +
Sbjct: 362 FCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYR- 420
Query: 264 IDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
I P + Y +VD LG+ GK+ EA M+ M ++PD+ + +L+
Sbjct: 421 IVPRLEHYACMVDLLGRAGKLVEAYEMIKAM---RMEPDLFVWGALL 464
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 9/251 (3%)
Query: 93 LVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHD 152
LV N LI Y G + A + GY+PD +T ++++ G++ + H
Sbjct: 239 LVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHS 298
Query: 153 DVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDK 212
+ +G LNQ LI+ K G+ A + I R V N++I L
Sbjct: 299 LINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR----SVACCNSMISCLAIHG 354
Query: 213 LVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYT 272
A +++S M + + P+ +T+ A++ G L + + + EM +++ P+V +
Sbjct: 355 KGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFG 414
Query: 273 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVN-EVNKAQDVFNAMSQ 331
L+ LG+ GK++EA ++ M VKP+ +L+ G C V+ + A+ V +
Sbjct: 415 CLIHLLGRSGKLKEAYRLVKEM---HVKPNDTVLGALL-GACKVHMDTEMAEQVMKIIET 470
Query: 332 RGETPDVHSYN 342
G + +S N
Sbjct: 471 AGSITNSYSEN 481
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 109/240 (45%), Gaps = 8/240 (3%)
Query: 125 QPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALE 184
+ + ++ ++ G G + A V A+ ++ + TLI G + G + A++
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVI----WNTLIAGYAQNGYSDDAID 260
Query: 185 LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
+QG G +PD V ++I+ + + + +++S + +GI N +ALI +
Sbjct: 261 AFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 320
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
G L+ A + + + +++ V ++ L GK +EA M + M +KPD +
Sbjct: 321 KCGDLENATSVFESISVRS----VACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEI 376
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
T+ +++ + + +F+ M + P+V + +I+ L + EA L+ EM
Sbjct: 377 TFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%)
Query: 181 AALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
A L ++++ G+ PD + N II + K V A ++ EM G PN TYS L+
Sbjct: 206 AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLV 265
Query: 241 YGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVK 300
G C G++ Q +G EM +K + P+ Y +L+ +L E ++ EA ++ M+ +
Sbjct: 266 KGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 301 PDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIIN 346
PD++TYN+++ C ++A ++ +R +Y +++
Sbjct: 326 PDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 42 AISHFNRMLQMPSTPPIFE------------FNKVLTSLVKTKHYSTAISLSHQMEFTGI 89
A +N+ML+ + P E FNK+ V + SL+ QM+ G+
Sbjct: 163 AFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYV---YLHAVRSLTKQMKSNGV 219
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQ 149
P +N++I Y +++ A V + G +P+ T++ L+KG+C G++ + L
Sbjct: 220 IPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLG 279
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
F+ ++ +G + N Y LI L A+E++ + + PD++ YNT++ LC
Sbjct: 280 FYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELC 339
Query: 210 KDKLVSHAFDLYSEM 224
+ S A ++ E
Sbjct: 340 RGGRGSEALEMVEEW 354
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
N L CY +L + S + + G PDT +IK ++ A++ ++
Sbjct: 194 FNKLNVCYVYLHAVRS---LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMA 250
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
G N +Y L+ G+C+ G L + +Q +G+ P+ Y +I SL ++ +
Sbjct: 251 LYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLD 310
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDP 266
A ++ +M+A +SP+++TY+ ++ C G+ +A+ +++E K DP
Sbjct: 311 EAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE--WKKRDP 359
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 12/226 (5%)
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
F +G+ N +Y T+I + L+ + + V +YN II C
Sbjct: 95 FRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCC 154
Query: 210 KDK-LVSHAFDLYSEMVAKGIS-PNVVTYSALIY---------GFCIVGQLKQAIGLLDE 258
K L + AFD+Y++M+ S P++ TY+ L+ C V L L +
Sbjct: 155 GRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYV-YLHAVRSLTKQ 213
Query: 259 MGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE 318
M + PD + +++ A K +V EA + M G +P+ TY+ L+ G C
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 319 VNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
V + + M +G P+ Y ++I L + DEA+ ++ +M
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDM 319
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 19/224 (8%)
Query: 109 INSAFSVLAGILKRG-YQPDTITFTTLIK---------GLC---LHGKIQRALQFHDD-V 154
N AF V +L+ +PD T+T L+ +C LH Q + V
Sbjct: 160 FNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGV 219
Query: 155 LAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLV 214
+ F+LN + I K E A+ + + + G +P+ Y+ ++ +C+ V
Sbjct: 220 IPDTFVLNMI-----IKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRV 274
Query: 215 SHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTIL 274
Y EM KG+ PN Y LI + +L +A+ ++ +M ++ PD+ TY +
Sbjct: 275 GQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTV 334
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNE 318
+ L + G+ EA M+ K+ Y +LMD +N+
Sbjct: 335 LTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEVYFLNK 378
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 146/319 (45%), Gaps = 19/319 (5%)
Query: 51 QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQIN 110
+MP + + ++T +T Y A+ +M+ ++P+L T ++ +G ++
Sbjct: 166 EMP-VRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLS 221
Query: 111 SAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFL--LNQVSYGT 168
+ ILKR + +L G L + Q D + G L ++VS+ +
Sbjct: 222 LGKGIHGLILKRA------SLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNS 275
Query: 169 LINGLCKLGETSAALELLRRIQ-GRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAK 227
+I+GL + A++L +Q GIKPD + +++ + V H ++ ++
Sbjct: 276 MISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA 335
Query: 228 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREA 287
GI + +A++ + G ++ A+ + + + KN V+T+ L+ L G E+
Sbjct: 336 GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKN----VFTWNALLGGLAIHGHGLES 391
Query: 288 KNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGET--PDVHSYNIII 345
M+K G KP++VT+ + ++ C V++ + F+ M R P + Y +I
Sbjct: 392 LRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMI 451
Query: 346 NGLCKIKMADEALNLLAEM 364
+ LC+ + DEAL L+ M
Sbjct: 452 DLLCRAGLLDEALELVKAM 470
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 173 LCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP- 231
L +L ++L + ++IQ + I D++ + II+ + S F YS ++ I
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 232 -NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNM 290
+ +Y+ L+ + + + + I PD++T+ + A GK +RE K +
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQI 128
Query: 291 LAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
++ K G D+ NSL+ Y + E A VF M R DV S+ II G +
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR----DVVSWTGIITGFTR 184
Query: 351 IKMADEALNLLAEM 364
+ EAL+ ++M
Sbjct: 185 TGLYKEALDTFSKM 198
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 126/304 (41%), Gaps = 28/304 (9%)
Query: 62 NKVLTSLVKTKHYSTAIS-LSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
NKV+T L K+ +++ S + H + S + N L++ Y + +
Sbjct: 42 NKVVTFLGKSADFASYSSVILHSIRSV---LSSFSYNTLLSSYAVCDKPRVTIFAYKTFV 98
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLIN--GLCKLGE 178
G+ PD TF + K I+ Q H V GF + +L++ G+C GE
Sbjct: 99 SNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVC--GE 156
Query: 179 TSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSA 238
+ A ++ + R DVV + II + L A D +S+M + PN+ TY
Sbjct: 157 SRNACKVFGEMPVR----DVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVC 209
Query: 239 LIYGFCIVGQLKQAIG----LLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVM 294
++ VG L G +L L +++ T L+D K ++ +A + +
Sbjct: 210 VLVSSGRVGCLSLGKGIHGLILKRASLISLE----TGNALIDMYVKCEQLSDAMRVFGEL 265
Query: 295 IKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM-SQRGETPDVHSYNIIINGLCKIKM 353
K+ D V++NS++ G +A D+F+ M + G PD H +++ +
Sbjct: 266 EKK----DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGA 321
Query: 354 ADEA 357
D
Sbjct: 322 VDHG 325
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 87 TGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQR 146
GIK +++ Y G I +A + GI + + T+ L+ GL +HG
Sbjct: 335 AGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK----NVFTWNALLGGLAIHGHGLE 390
Query: 147 ALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGR--GIKPDVVMYNTI 204
+L++ ++++ GF N V++ +N C G +++ R + P + Y +
Sbjct: 391 SLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCM 450
Query: 205 IDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALI 240
ID LC+ L+ A +L M K P+V A++
Sbjct: 451 IDLLCRAGLLDEALELVKAMPVK---PDVRICGAIL 483
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 103/240 (42%), Gaps = 46/240 (19%)
Query: 160 LLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTII-------------- 205
+L+ SY TL++ + + + G PD+ + +
Sbjct: 68 VLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQ 127
Query: 206 ------------DSLCKDKLV---------SHAFDLYSEMVAKGISPNVVTYSALIYGFC 244
D ++ LV +A ++ EM + +VV+++ +I GF
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR----DVVSWTGIITGFT 183
Query: 245 IVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
G K+A+ +M +++P++ TY ++ + G+ G + K + +++K+ +
Sbjct: 184 RTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLE 240
Query: 305 TYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
T N+L+D Y +++ A VF + E D S+N +I+GL + + EA++L + M
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGEL----EKKDKVSWNSMISGLVHCERSKEAIDLFSLM 296
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 148/321 (46%), Gaps = 14/321 (4%)
Query: 42 AISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILIN 101
AI+ + ++ + + P F F VL V+ + Q+ G S+ + LI
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 102 CYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLL 161
Y G + A + +L + D + L+ G G++ A + + ++
Sbjct: 160 MYFSCGGLGDARKMFDEMLVK----DVNVWNALLAGYGKVGEMDEARSLLE--MMPCWVR 213
Query: 162 NQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLY 221
N+VS+ +I+G K G S A+E+ +R+ ++PD V ++ + + +
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC 273
Query: 222 SEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKE 281
S + +G++ V +A+I + G + +A+ + + + +N V T+T ++ L
Sbjct: 274 SYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN----VVTWTTIIAGLATH 329
Query: 282 GKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAM-SQRGETPDVHS 340
G EA M M+K GV+P+ VT+ +++ V V+ + +FN+M S+ G P++
Sbjct: 330 GHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEH 389
Query: 341 YNIIINGL---CKIKMADEAL 358
Y +I+ L K++ ADE +
Sbjct: 390 YGCMIDLLGRAGKLREADEVI 410
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 113/276 (40%), Gaps = 22/276 (7%)
Query: 40 GDAISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNIL 99
GDA F+ ML + +N +L K A SL M P V +
Sbjct: 168 GDARKMFDEML----VKDVNVWNALLAGYGKVGEMDEARSLLEMM------PCWVRNEVS 217
Query: 100 INC----YCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
C Y G+ + A V +L +PD +T ++ G ++ + V
Sbjct: 218 WTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVD 277
Query: 156 AQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVS 215
+G +I+ K G + AL++ + R +VV + TII L +
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER----NVVTWTTIIAGLATHGHGA 333
Query: 216 HAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLK-NIDPDVYTYTIL 274
A +++ MV G+ PN VT+ A++ VG + L + M K I P++ Y +
Sbjct: 334 EALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCM 393
Query: 275 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLM 310
+D LG+ GK+REA ++ M K + + SL+
Sbjct: 394 IDLLGRAGKLREADEVIKSM---PFKANAAIWGSLL 426
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 13/277 (4%)
Query: 91 PSLVTMNILINCYCHLGQINS---AFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRA 147
P+ N +I L + N+ A +V + +PDT TF ++K +
Sbjct: 76 PNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 135
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
Q H V+ GF S ++ GL ++ + L R++ + DV ++N ++
Sbjct: 136 RQIHGQVVVFGF----DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAG 191
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
K + A L EM+ + N V+++ +I G+ G+ +AI + M ++N++PD
Sbjct: 192 YGKVGEMDEARSLL-EMMPCWVR-NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPD 249
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFN 327
T ++ A G + + + + + +G+ V N+++D Y + KA DVF
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE 309
Query: 328 AMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+++R +V ++ II GL EAL + M
Sbjct: 310 CVNER----NVVTWTTIIAGLATHGHGAEALAMFNRM 342
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/302 (18%), Positives = 124/302 (41%), Gaps = 10/302 (3%)
Query: 63 KVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKR 122
+ L+ L + +S AI++ ++ KP T ++ + + + ++
Sbjct: 86 RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 145
Query: 123 GYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAA 182
G+ T LI+ G + A + D++L + + + L+ G K+GE A
Sbjct: 146 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNV----WNALLAGYGKVGEMDEA 201
Query: 183 LELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYG 242
LL + + V + +I K S A +++ M+ + + P+ VT A++
Sbjct: 202 RSLLEMMPC--WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSA 259
Query: 243 FCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD 302
+G L+ + + + ++ V ++D K G + +A ++ + ++ +
Sbjct: 260 CADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER----N 315
Query: 303 VVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLA 362
VVT+ +++ G +A +FN M + G P+ ++ I++ + D L
Sbjct: 316 VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN 375
Query: 363 EM 364
M
Sbjct: 376 SM 377
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 9/232 (3%)
Query: 90 KPSLVTMNILINCYCHLGQINSAFSVLAGILKRGY--QPDTITFTTLIKGLCLHGKIQRA 147
K + + +I CY G+ A + A +L+R QPD IT ++++ G
Sbjct: 291 KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG 350
Query: 148 LQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDS 207
+ G ++ + +LI+ K G+ + A ++ + K D V Y+ +I
Sbjct: 351 TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN----KKDTVSYSAMIMG 406
Query: 208 LCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPD 267
+ + + A L++ M+ K I PNVVT++ L+ + G +++ + M N++P
Sbjct: 407 CGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPS 466
Query: 268 VYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
Y I+VD LG+ G++ EA ++ M Q P+ + +L+ L N V
Sbjct: 467 ADHYGIMVDMLGRAGRLEEAYELIKSMPMQ---PNAGVWGALLLASGLHNNV 515
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 131/306 (42%), Gaps = 49/306 (16%)
Query: 94 VTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGL--CLHGKIQRALQFH 151
V+ N++I+ Y G + +A S+ + + + ++ LI G C K+ R +
Sbjct: 202 VSWNLIISSYAKKGDMGNACSLFSAMPLK----SPASWNILIGGYVNCREMKLART---Y 254
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKD 211
D + Q N VS+ T+I+G KLG+ +A EL R + K D ++Y+ +I ++
Sbjct: 255 FDAMPQK---NGVSWITMISGYTKLGDVQSAEELFRLMS----KKDKLVYDAMIACYTQN 307
Query: 212 KLVSHAFDLYSEMVAKG--ISPNVVTYSALIYGFCIVGQLKQAIGL---LDEMGLKNID- 265
A L+++M+ + I P+ +T S+++ +G + + E G+K D
Sbjct: 308 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDL 367
Query: 266 ---------------------------PDVYTYTILVDALGKEGKVREAKNMLAVMIKQG 298
D +Y+ ++ G G EA ++ MI++
Sbjct: 368 LSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKK 427
Query: 299 VKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEAL 358
+ P+VVT+ L+ Y V + FN+M P Y I+++ L + +EA
Sbjct: 428 IPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAY 487
Query: 359 NLLAEM 364
L+ M
Sbjct: 488 ELIKSM 493
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 22/297 (7%)
Query: 43 ISHFNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINC 102
+++ R+L+ + F + ++ L + + + + + M +GI PS + ++
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 103 YCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLN 162
+ + + A LK G T L+ G I+ A + DD+ + N
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEK----N 169
Query: 163 QVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYS 222
VS+ +L++G + GE L+ RR+ + + D V +N II S K + +A L+S
Sbjct: 170 TVSWNSLLHGYLESGE----LDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFS 225
Query: 223 EMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
M K SP +++ LI G+ ++K A D M KN ++ ++ K G
Sbjct: 226 AMPLK--SP--ASWNILIGGYVNCREMKLARTYFDAMPQKN----GVSWITMISGYTKLG 277
Query: 283 KVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE--TPD 337
V+ A+ + +M K+ D + Y++++ Y + A +F M +R PD
Sbjct: 278 DVQSAEELFRLMSKK----DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPD 330
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 108/222 (48%), Gaps = 12/222 (5%)
Query: 152 DDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRI---QGRGIKPDVVMYNTIIDSL 208
+ VL+ + N+ Y ++I K G+ A+ + R + + +P + Y+ + +L
Sbjct: 196 NQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKAL 255
Query: 209 C---KDKLVSHAF-----DLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
+ ++H + L+ +MV GI P+V + L+ G+ + + A+ + +M
Sbjct: 256 LGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMS 315
Query: 261 L-KNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEV 319
+ + +P+ +TY L+ L +G+ A+ +L+ M +G P+ +YNSL++ + L E+
Sbjct: 316 VVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEI 375
Query: 320 NKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLL 361
+ A M + G D SY +++ C+ DEA LL
Sbjct: 376 DDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL 417
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 185 LLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEM-VAKGISPNVVTYSALIYGF 243
L R++ GI+PDV N ++ V+ A ++ +M V PN TY LI+G
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
C G+ A LL EM K P+ +Y LV+A G++ +A L MI+ G D
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCK 350
++Y +L+D C + ++A + + ++ + D SY+ ++N L K
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREK-QLVDRDSYDKLVNVLHK 440
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 90 KPSLVTMNILI--------NCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLH 141
+P++ T +IL N Y + + + S+ ++ G +PD L+KG L
Sbjct: 242 RPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLS 301
Query: 142 GKIQRALQ-FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVM 200
+ AL+ FH + N +Y LI+GLC G T A ELL ++G+G P+
Sbjct: 302 LHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKS 361
Query: 201 YNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMG 260
YN+++++ + A EM+ G + ++Y L+ C G+ +A LL+ +
Sbjct: 362 YNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLR 421
Query: 261 LKN-IDPDVYTYTILVDALGKE 281
K +D D +Y LV+ L K+
Sbjct: 422 EKQLVDRD--SYDKLVNVLHKD 441
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 47/211 (22%)
Query: 201 YNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM- 259
Y+ I L K+ D+ +++++ N Y+++I+ F G+L +A+ + M
Sbjct: 175 YHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMV 234
Query: 260 GLKNID--PDVYTYTILVDALGKEGK--------VREAKNMLAVMIKQGVKPDVVTYNSL 309
KN++ P + TY IL AL G + +++ M+ G++PDV N L
Sbjct: 235 TSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCL 294
Query: 310 MDGYCLVNEVNKAQDVFNAMS------------------------------------QRG 333
+ GY L VN A +F+ MS +G
Sbjct: 295 VKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKG 354
Query: 334 ETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
P+ SYN ++N D+A+ L EM
Sbjct: 355 FVPNGKSYNSLVNAFALSGEIDDAVKCLWEM 385
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 10/297 (3%)
Query: 73 HYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGI-LKRGYQPDTITF 131
+S A L ++ +G+ + +I++ Y G + A SVL + ++ PD F
Sbjct: 573 EFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLF 632
Query: 132 TTLIKGLCLHGKIQRALQ-FHDDVLAQGFLLNQVSYGTLINGLCK---LGETSAALELLR 187
+++ + +Q LQ + + G NQ Y +IN + L E S E +
Sbjct: 633 RDMLR-IYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 691
Query: 188 RIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVG 247
R G P+ V +N ++D K KL +L+ G+ +V++Y+ +I +
Sbjct: 692 RY---GFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNK 747
Query: 248 QLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYN 307
+ M + Y L+DA GK+ ++ + +++L M K PD TYN
Sbjct: 748 DYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYN 807
Query: 308 SLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
+++ Y +++ DV + + G PD+ SYN +I M +EA+ L+ EM
Sbjct: 808 IMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 7/215 (3%)
Query: 88 GIKPSLVTMNILINCYCH---LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKI 144
G P+ VT N+L++ Y ++N F +LA KR D I++ T+I +
Sbjct: 694 GFTPNTVTFNVLLDVYGKAKLFKKVNELF-LLA---KRHGVVDVISYNTIIAAYGKNKDY 749
Query: 145 QRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTI 204
++ GF ++ +Y TL++ K + +L+R++ PD YN +
Sbjct: 750 TNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIM 809
Query: 205 IDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNI 264
I+ + + D+ E+ G+ P++ +Y+ LI + I G +++A+GL+ EM +NI
Sbjct: 810 INIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNI 869
Query: 265 DPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGV 299
PD TYT LV AL + + EA M + G+
Sbjct: 870 IPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 51 QMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQIN 110
Q P ++ F +L K L +++ +GI + N +INC ++
Sbjct: 622 QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLD 681
Query: 111 SAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLI 170
+++ G+ P+T+TF L+ DV + L +V+
Sbjct: 682 ELSGTFEEMIRYGFTPNTVTFNVLL-----------------DVYGKAKLFKKVN----- 719
Query: 171 NGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGIS 230
EL + G+ DV+ YNTII + K+K ++ M G S
Sbjct: 720 -------------ELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFS 765
Query: 231 PNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNM 290
++ Y+ L+ + Q+++ +L M PD YTY I+++ G++G + E ++
Sbjct: 766 VSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADV 825
Query: 291 LAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGL 348
L + + G+ PD+ +YN+L+ Y + V +A + M R PD +Y ++ L
Sbjct: 826 LKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 18/253 (7%)
Query: 112 AFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLIN 171
A+S++ +L R + D LIK LC + Q++ Q + T+I
Sbjct: 176 AYSLILRVLGRREEWDRAE--DLIKELCGFHEFQKSYQV---------------FNTVIY 218
Query: 172 GLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISP 231
K G A + + G++P+V ++ K+ V A +S M GI
Sbjct: 219 ACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVC 278
Query: 232 NVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNML 291
YS++I + + +A ++D M + + + ++++A ++GK+ A+++L
Sbjct: 279 ESA-YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESIL 337
Query: 292 AVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKI 351
M G P+++ YN+L+ GY + ++ AQ +F+ + G PD SY +I G +
Sbjct: 338 VSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRA 397
Query: 352 KMADEALNLLAEM 364
+EA + E+
Sbjct: 398 DNYEEAKHYYQEL 410
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 137/291 (47%), Gaps = 21/291 (7%)
Query: 84 MEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGK 143
ME G P+++ N LI Y + ++ +A + + G +PD ++ ++I+G
Sbjct: 340 MEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADN 399
Query: 144 IQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNT 203
+ A ++ ++ G+ N + TLIN K G+ A++ + + G G + Y++
Sbjct: 400 YEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQ-----YSS 454
Query: 204 IIDSLCKDKLVSHAFDLYSEM-----VAKG-----ISPNVVTYSALIYGFCIVGQLKQAI 253
I+ ++ A++ ++ V KG I N ++S+L+ + G + +
Sbjct: 455 ILG------IILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCL 508
Query: 254 GLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY 313
GLL E ++ + + Y +L+ + + G++ +A + ++ + ++ ++++D Y
Sbjct: 509 GLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIY 568
Query: 314 CLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
++ E ++A+ ++ + G D ++I++ K +EA ++L M
Sbjct: 569 TVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIM 619
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 135/325 (41%), Gaps = 12/325 (3%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F+R+ + P + ++ + +Y A +++ G KP+ + LIN
Sbjct: 372 FHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAK 431
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRAL-----QFHDDVLAQGFL 160
G + A + + G Q +I +++ GKI FH+ +
Sbjct: 432 YGDRDGAIKTIEDMTGIGCQYSSI-LGIILQAYEKVGKIDVVPCVLKGSFHNHIR----- 485
Query: 161 LNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDL 220
LNQ S+ +L+ K G L LLR + R + +Y+ +I S + ++ A +
Sbjct: 486 LNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKI 545
Query: 221 YSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGK 280
Y+ + N+ S +I + ++G+ +A L + + D ++I+V K
Sbjct: 546 YNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVK 605
Query: 281 EGKVREAKNMLAVMIKQ-GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVH 339
G + EA ++L +M +Q + PDV + ++ Y + +K Q ++ + + G +
Sbjct: 606 AGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQE 665
Query: 340 SYNIIINGLCKIKMADEALNLLAEM 364
YN +IN + DE EM
Sbjct: 666 MYNCVINCCARALPLDELSGTFEEM 690
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 98/225 (43%), Gaps = 7/225 (3%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
FN V+ + K + A H M G++P++ T+ +L+ Y + A + +
Sbjct: 213 FNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMR 272
Query: 121 KRGYQPDTI--TFTTLIKGLCLHGKIQRALQFHDDVLAQGFL-LNQVSYGTLINGLCKLG 177
K G ++ + T+ L L+ K + + D++ Q + L ++ ++N + G
Sbjct: 273 KFGIVCESAYSSMITIYTRLRLYDKAEEVI----DLMKQDRVRLKLENWLVMLNAYSQQG 328
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
+ A +L ++ G P+++ YNT+I K + A L+ + G+ P+ +Y
Sbjct: 329 KMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYR 388
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEG 282
++I G+ ++A E+ P+ + L++ K G
Sbjct: 389 SMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYG 433
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 101/241 (41%), Gaps = 1/241 (0%)
Query: 124 YQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAAL 183
+Q F T+I G ++ A ++ +L G N + G L+ K A
Sbjct: 206 FQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAE 265
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
++ GI + Y+++I + +L A ++ M + + + ++ +
Sbjct: 266 FAFSHMRKFGIVCESA-YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAY 324
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDV 303
G+++ A +L M P++ Y L+ GK K+ A+ + + G++PD
Sbjct: 325 SQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDE 384
Query: 304 VTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPDVHSYNIIINGLCKIKMADEALNLLAE 363
+Y S+++G+ + +A+ + + + G P+ + +IN K D A+ + +
Sbjct: 385 TSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIED 444
Query: 364 M 364
M
Sbjct: 445 M 445
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%)
Query: 61 FNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGIL 120
+N +L + K K S+ +M+ + P T NI+IN Y G I+ VL +
Sbjct: 771 YNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELK 830
Query: 121 KRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETS 180
+ G PD ++ TLIK + G ++ A+ ++ + + ++V+Y L+ L + E
Sbjct: 831 ESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFL 890
Query: 181 AALELLRRIQGRGI 194
A++ ++ GI
Sbjct: 891 EAIKWSLWMKQMGI 904
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 150 FHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLC 209
FH + +GF V + + L K G T ALEL +I+ + PDVV + I+++
Sbjct: 188 FHK-MRTEGFTNEAVK---MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYA 243
Query: 210 KDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQL-KQAIGLLDEMGLKNIDPDV 268
++ M+A G+SPN TYS LI G G+ K A L EM + P+
Sbjct: 244 NAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNA 303
Query: 269 YTYTILVDALGKEGKVREAKNMLAVMIKQGVKPD 302
TYT + +A +EGK A+ +L M +G PD
Sbjct: 304 ATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 184 ELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGF 243
E+ +++ G + V + D+L KD A +L+S++ K P+VV ++A++ +
Sbjct: 186 EIFHKMRTEGFTNEAV---KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAY 242
Query: 244 CIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKV-REAKNMLAVMIKQGVKPD 302
GQ K+ + + M + P+ YTY++L+ L +GK ++AK L M+ G+ P+
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPN 302
Query: 303 VVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGETPD 337
TY ++ + + + A+++ M +G PD
Sbjct: 303 AATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 63 KVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAGILKR 122
K+ +L K A+ L Q++ P +V ++ Y + GQ V +L
Sbjct: 202 KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLAS 261
Query: 123 GYQPDTITFTTLIKGLCLHGKIQR-ALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSA 181
G P+ T++ LIKGL GK + A ++ +++ G N +Y + + G+ +
Sbjct: 262 GVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEES 321
Query: 182 ALELLRRIQGRGIKPD 197
A ELL+ ++G+G PD
Sbjct: 322 ARELLQEMKGKGFVPD 337
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Query: 96 MNILINCYCHLGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVL 155
N +I + H A +L +L+ G D + + ++K G ++ +Q H
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIH---- 144
Query: 156 AQGFLLNQVSYGTLI--NGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKL 213
GFL + L N L L L L R++ R K D V YN++ID K L
Sbjct: 145 --GFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 214 VSHAFDLYSEMVAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTI 273
+ A +L+ M + N+++++++I G+ Q + + ++ + D+ ++
Sbjct: 203 IVSARELFDLMPME--MKNLISWNSMISGY---AQTSDGVDIASKLFADMPEKDLISWNS 257
Query: 274 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRG 333
++D K G++ +AK + VM ++ DVVT+ +++DGY + V+ A+ +F+ M R
Sbjct: 258 MIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGFVHHAKTLFDQMPHR- 312
Query: 334 ETPDVHSYNIIINGLCKIKMADEALNLLAEM 364
DV +YN ++ G + K EAL + ++M
Sbjct: 313 ---DVVAYNSMMAGYVQNKYHMEALEIFSDM 340
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 139/304 (45%), Gaps = 20/304 (6%)
Query: 59 FEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCHLGQINSAFSVLAG 118
F +N V+ S K A+ L M G+ ++++++ LG + +
Sbjct: 87 FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGF 146
Query: 119 ILKRGYQPDTITFTTLIKGLCLH-GKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLG 177
+ K G D LI GL L G + + Q D + + + VSY ++I+G K G
Sbjct: 147 LKKTGLWSDLFLQNCLI-GLYLKCGCLGLSRQMFDRMPKR----DSVSYNSMIDGYVKCG 201
Query: 178 ETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYS 237
+A EL + +++ +N++I + S D+ S++ A ++++++
Sbjct: 202 LIVSARELFDLMPME--MKNLISWNSMISGYAQ---TSDGVDIASKLFADMPEKDLISWN 256
Query: 238 ALIYGFCIVGQLKQAIGLLDEMGLKNIDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQ 297
++I G+ G+++ A GL D M + DV T+ ++D K G V AK + M +
Sbjct: 257 SMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGFVHHAKTLFDQMPHR 312
Query: 298 GVKPDVVTYNSLMDGYCLVNEVNKAQDVFNAMSQRGE-TPDVHSYNIIINGLCKIKMADE 356
DVV YNS+M GY +A ++F+ M + PD + I++ + ++ +
Sbjct: 313 ----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSK 368
Query: 357 ALNL 360
A+++
Sbjct: 369 AIDM 372
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 148/352 (42%), Gaps = 50/352 (14%)
Query: 46 FNRMLQMPSTPPIFEFNKVLTSLVKTKHYSTAISLSHQMEFTGIKPSLVTMNILINCYCH 105
F+RM + S +N ++ VK +A L M +L++ N +I+ Y
Sbjct: 179 FDRMPKRDSV----SYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGY-- 230
Query: 106 LGQINSAFSVLAGILKRGYQPDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVS 165
Q + + + + + D I++ ++I G HG+I+ A D + + + V+
Sbjct: 231 -AQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVT 285
Query: 166 YGTLINGLCKLGETSAALELLRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMV 225
+ T+I+G KLG A L ++ R DVV YN+++ ++K A +++S+M
Sbjct: 286 WATMIDGYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMAGYVQNKYHMEALEIFSDME 341
Query: 226 AKG-ISPNVVTYSALIYGFCIVGQLKQAIG-----------LLDEMGLKNID-------- 265
+ + P+ T ++ +G+L +AI L ++G+ ID
Sbjct: 342 KESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSI 401
Query: 266 ------------PDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYNSLMDGY 313
+ + ++ L G A +ML + + +KPD +T+ +++
Sbjct: 402 QHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
Query: 314 CLVNEVNKAQDVFNAMSQRGE-TPDVHSYNIIINGLCKIKMADEALNLLAEM 364
V + F M ++ + P + Y +++ L + + A NL+ EM
Sbjct: 462 SHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEM 513
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 126 PDTITFTTLIKGLCLHGKIQRALQFHDDVLAQGFLLNQVSYGTLINGLCKLGETSAALEL 185
PD T ++ + G++ +A+ H ++ + F L LI+ K G A+ +
Sbjct: 348 PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLV 407
Query: 186 LRRIQGRGIKPDVVMYNTIIDSLCKDKLVSHAFDLYSEMVAKGISPNVVTYSALIYGFCI 245
I+ + I +N +I L L AFD+ ++ + P+ +T+ ++
Sbjct: 408 FEGIENKSIDH----WNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSH 463
Query: 246 VGQLKQAIGLLDEMGLKN-IDPDVYTYTILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 304
G +K+ + + M K+ I+P + Y +VD L + G + AKN++ M V+P+ V
Sbjct: 464 SGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEM---PVEPNDV 520
Query: 305 TYNSLM 310
+ + +
Sbjct: 521 IWRTFL 526