Miyakogusa Predicted Gene
- Lj2g3v0523230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0523230.1 Non Chatacterized Hit- tr|I1L450|I1L450_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,37.24,2e-19,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
PPR_2,P,CUFF.34659.1
(150 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-25
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-24
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 108 2e-24
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 107 2e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-23
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-23
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-23
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 9e-23
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 9e-23
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 97 3e-21
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-21
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-21
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 96 8e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-20
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 95 1e-20
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-20
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-20
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-20
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 2e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-19
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 91 3e-19
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-19
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-19
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-19
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 7e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-18
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-18
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-18
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 2e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-18
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 3e-18
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-18
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 5e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 5e-18
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 6e-18
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-17
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 86 1e-17
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-17
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-17
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 85 2e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-17
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-17
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-17
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 5e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 83 6e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-17
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 9e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-16
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 82 2e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 5e-16
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-16
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-16
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-16
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-15
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 78 2e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-15
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 3e-15
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-15
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-15
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 76 8e-15
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-15
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-14
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-14
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-14
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 9e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 9e-14
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-13
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-13
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-13
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 4e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 70 5e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-12
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 3e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-12
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 67 3e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-12
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-12
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-12
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 1e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 64 4e-11
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 4e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 64 5e-11
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 64 5e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-11
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-11
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 6e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-10
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-10
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 60 7e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 60 7e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 60 8e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 59 1e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 59 1e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 57 4e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 57 4e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 56 8e-09
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 56 9e-09
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-09
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 56 1e-08
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 56 1e-08
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 56 1e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 54 5e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 7e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-08
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 52 1e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 52 1e-07
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 52 2e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-07
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-07
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-07
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-07
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-07
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 1e-06
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 49 1e-06
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 1e-06
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 2e-06
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 48 2e-06
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 2e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 2e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 3e-06
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 3e-06
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 3e-06
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 3e-06
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 5e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 6e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 6e-06
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 6e-06
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 47 7e-06
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 7e-06
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 7e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 46 8e-06
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 8e-06
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 110 bits (275), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 88/143 (61%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P +IITY+ LLD LCK ++ ++PD+ TYNI+++G+CKAG+++D
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F L +KG V YT MI+G C++GL +EA AL +M+ +G PN+ T+ ++IR+
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
+G+ + +L+ EM G +
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFV 602
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N +TYN+L+ L ++ D GV PD+ TY+IL+DGLCK G+
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ A +F L ++TY +MI G+CK G ++ L + ++G PN I + +
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I G ++A+ L EM + G L
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTL 567
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T+++L+DA K + + + PD+ TY+ L++G C RL +A+ +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K V TY +I G CK +E + L +M G N +T+ ++I+ LF+
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ D A+K+ +M+ G+
Sbjct: 444 GDCDMAQKIFKKMVSDGV 461
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 76/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++TYNSL+ LC ++ + P++ T++ L+D K G+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A++++ +++ + + TY+ +ING C DEA + M + C PN +T+ +
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I+ + ++ +L EM +GL+
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLV 427
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++ TY ++++ LCK +D ++ D+ Y ++D LC
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA +F ++ KG V TY +I LC G + +A LLS M PN +TF +
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + G+ +AEKL EMI + +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSI 356
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+++ Y +++DALC +V+ ++G++P++ TYN L+ LC GR DA +
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
D++ + + V T++ +I+ KEG EA L +M P+ T+ S+I
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 128 NGENDKAEKLLLEMIDK 144
+ D+A+ + MI K
Sbjct: 373 HDRLDEAKHMFELMISK 389
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I TY+SL++ C +D + P++ TYN L+ G CKA R+++ E+F
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TY +I GL + G D A + KM +G P+ IT+ ++ L +
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 129 GENDKAEKLLLEMIDKGLLE 148
G+ +KA ++ E + K +E
Sbjct: 479 GKLEKA-LVVFEYLQKSKME 497
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
V+ +P +I+ +N LL A+ K + D + + DL +YNIL++ C+ +L
Sbjct: 72 VQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQL 131
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A + ++ GY + T + ++NG C EA+AL+ +M + PN +TF ++
Sbjct: 132 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTL 191
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
I LF + + +A L+ M+ +G
Sbjct: 192 IHGLFLHNKASEAVALIDRMVARG 215
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ +YN L++ C+ + G +PD+ T + L++G C R+ +A +
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ + Y T+ +I+GL EA+AL+ +M GC P+ T+ +++ L +
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 129 GENDKAEKLLLEMIDKGLLE 148
G+ D A LL +M +KG +E
Sbjct: 234 GDIDLALSLLKKM-EKGKIE 252
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 35/175 (20%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T +SLL+ C + QP+ T+N L+ GL + +A
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME---IE------------ 109
+ ++ +G + TY ++NGLCK G D AL+LL KME IE
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 110 --------------------GCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
G PN +T+ S+IR L G A +LL +MI++
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
K +P +I TYN +++ +CK+ V+ +GV+P++ Y ++ G C+ G ++
Sbjct: 495 KMEP-DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +F ++ G TY +I ++G + L+ +M G +A T +I
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Query: 124 SLFENGENDKAEKLLLEMI 142
L + + EK LEM+
Sbjct: 614 ML----HDGRLEKSYLEML 628
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G NI+TYN LLD LCK+ + ++PD+ TYNI+++G+CKAG+++D
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+F +L +KG V Y MI+G C++G +EA +LL KM+ +G PN+ T+ ++IR+
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+G+ + + +L+ EM G
Sbjct: 583 RLRDGDREASAELIKEMRSCGF 604
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N +TY +L+ ++ D GV P++ TYNIL+DGLCK G+
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A +F L ++TY +MI G+CK G ++ L + ++G +PN I + +
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I G ++A+ LL +M + G L
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPL 570
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++TY ++++ LCK +D ++ D+ YN ++DGLCK
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA +F ++ KG V TY+ +I+ LC G + +A LLS M PN +TF +
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + G+ +AEKL EMI + +
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSI 359
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+++ YN+++D LCK H+D ++G++PD+ TY+ L+ LC GR DA +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
D++ + + V T++ +I+ KEG EA L +M P+ T+ S+I
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 128 NGENDKAEKLLLEMIDK 144
+ D+A+ + MI K
Sbjct: 376 HDRLDEAKHMFELMISK 392
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T+++L+DA K + + + PD+ TY+ L++G C RL +A+ +F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K V TY+ +I G CK +E + L +M G N +T+ ++I F+
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 129 GENDKAEKLLLEMIDKGL 146
+ D A+ + +M+ G+
Sbjct: 447 RDCDNAQMVFKQMVSVGV 464
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++ TY+SL+ LC ++ + P++ T++ L+D K G+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A++++ +++ + + TY+ +ING C DEA + M + C PN +T+ +
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I+ + ++ +L EM +GL+
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLV 430
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G ++ TY+ ++ C+ + G +PD+ T + L++G C + R
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA + ++ GY T+T +I+GL EA+AL+ +M GC P+ +T+ +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLE 148
++ L + G+ D A LL +M +KG +E
Sbjct: 229 VVNGLCKRGDIDLALSLLKKM-EKGKIE 255
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + T+ +L+ L + +G QPDL TY +++GLCK G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + V Y +I+GLCK D+AL L ++M+ +G P+ T+ S+I
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 125 LFENGENDKAEKLLLEMIDK 144
L G A +LL +MI++
Sbjct: 303 LCNYGRWSDASRLLSDMIER 322
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T +SLL+ C S + + G +PD T+ L+ GL + +A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ +G + TY ++NGLCK G D AL+LL KME + + + +II
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + D A L EM +KG+
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGI 289
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
VK +P +I+ +N LL A+ K + + G+ DL TY+I ++ C+ +L
Sbjct: 75 VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A + ++ GY + T + ++NG C +A+AL+ +M G P+ TF ++
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
I LF + + +A L+ +M+ +G
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRG 218
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I TY+SL++ C +D + P++ TY+ L+ G CKA R+++ E+F
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TYT +I+G + D A + +M G PN +T+ ++ L +N
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 129 GENDKAEKLLLEMIDKGLLE 148
G+ KA ++ E + + +E
Sbjct: 482 GKLAKA-MVVFEYLQRSTME 500
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 69/138 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++TY++L+ CK+ V+ +G+ + TY L+ G +A +AQ +F
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G H + TY ++++GLCK G +A+ + ++ P+ T+ +I + +
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ + +L + KG+
Sbjct: 517 GKVEDGWELFCNLSLKGV 534
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 88/146 (60%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++TYN+L+D CK +D +G++P+L +YN++++GLC+ GR
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K+ + ++ +GY + TY +I G CKEG F +AL + ++M G TP+ IT+ S
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I S+ + G ++A + L +M +GL
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGL 376
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 81/142 (57%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++++Y+++L C+S+ VD ++G++PD TY+ L+ G C+ R
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
K+A +++ ++L G TYT +IN C EG ++AL L ++M +G P+ +T+
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 121 IIRSLFENGENDKAEKLLLEMI 142
+I L + +A++LLL++
Sbjct: 561 LINGLNKQSRTREAKRLLLKLF 582
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG N+I+YN +++ LC+ + +G D TYN L+ G CK G
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A + ++L G +V TYT +I+ +CK G + A+ L +M + G PN T+ +
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + G ++A ++L EM D G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGF 411
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V+G N TY +L+D + +++ D G P + TYN L++G C G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++DA + D+ KG V +Y+ +++G C+ DEAL + +M +G P+ IT+ S
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I+ E +A L EM+ GL
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGL 516
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 82/142 (57%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ITY SL+ ++CK+ +++ +G+ P+ TY L+DG + G + +A
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ G+ +V TY +ING C G ++A+A+L M+ +G +P+ +++ +++
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ + D+A ++ EM++KG+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGI 481
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ TYN L+ C + ++D +G P++ TYN L+DG CK ++ D ++
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ +KG + +Y V+INGLC+EG E +L++M G + + +T+ ++I+ +
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 129 GENDKAEKLLLEMIDKGL 146
G +A + EM+ GL
Sbjct: 324 GNFHQALVMHAEMLRHGL 341
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M+ +G + +TYN+L+ CK + G+ P + TY L+ +CKAG
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A E + ++G TYT +++G ++G +EA +L +M G +P+ +T+ +
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I G+ + A +L +M +KGL
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGL 446
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 10 IITYNSLLDALCKS-HHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++YN++LDA +S ++ + V P++ TYNIL+ G C AG + A +F
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ KG V TY +I+G CK D+ LL M ++G PN I++ +I L
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 129 GENDKAEKLLLEMIDKG 145
G + +L EM +G
Sbjct: 289 GRMKEVSFVLTEMNRRG 305
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 14 NSLLDALCKSHH----VDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR-LKDAQEIF 68
+S+ D + KS+ +D G P + +YN ++D ++ R + A+ +F
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++L V TY ++I G C G D AL L KME +GC PN +T+ ++I +
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 129 GENDKAEKLLLEMIDKGL 146
+ D KLL M KGL
Sbjct: 254 RKIDDGFKLLRSMALKGL 271
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P + TY +L++A C ++ ++GV PD+ TY++L++GL K R ++A
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 65 QEI---------------FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIE 109
+ + +H L+ +I + +I G C +G+ EA + M +
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 110 GCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
P+ + +I G+ KA L EM+ G L
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 87/142 (61%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P NI+TYN+LLD LCK+ ++ ++P + TYNI+++G+CKAG+++D
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F +L +KG V Y MI+G C++G +EA AL +M+ +G PN+ + ++IR+
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+G+ + + +L+ EM G
Sbjct: 581 RLRDGDREASAELIKEMRSCGF 602
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N +TYN L+ L ++ D GV P++ TYN L+DGLCK G+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ A +F L T++TY +MI G+CK G ++ L + ++G P+ + + +
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I G ++A+ L EM + G L
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTL 568
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V G N +T+N+L+ L + +G QPDL TY ++++GLCK G
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A + + + V Y +I+GLCK D+AL L +ME +G PN +T+ S
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
+I L G A +LL +MI++
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIER 320
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +++TY +++ LCK D ++P + YN ++DGLCK
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA +F ++ KG V TY+ +I+ LC G + +A LLS M P+ TF +
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + G+ +AEKL EM+ + +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSI 357
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 77/147 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++TY+SL+ LC ++ + PD+ T++ L+D K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A++++ +++ + ++ TY+ +ING C DEA + M + C P+ +T+ +
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I+ + ++ ++ EM +GL+
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLV 428
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 71/135 (52%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
++ YN+++D LCK H+D +G++P++ TY+ L+ LC GR DA +
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
D++ + + V T++ +I+ KEG EA L +M P+ +T+ S+I +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 130 ENDKAEKLLLEMIDK 144
D+A+++ M+ K
Sbjct: 376 RLDEAKQMFEFMVSK 390
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I+TY+SL++ C +D + PD+ TYN L+ G CK R+++ E+F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TY ++I GL + G D A + +M +G PN +T+ +++ L +N
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 129 GENDKAEKLLLEMIDKGLLE 148
G+ +KA ++ E + + +E
Sbjct: 480 GKLEKA-MVVFEYLQRSKME 498
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ T+++L+DA K + + + P + TY+ L++G C RL +A+++F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K V TY +I G CK +E + + +M G N +T+ +I+ LF+
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ D A+++ EM+ G+
Sbjct: 445 GDCDMAQEIFKEMVSDGV 462
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 68/142 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G NI+T +SLL+ C S + G QP+ T+N L+ GL + +A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ KG + TY V++NGLCK G D A LL+KME P + + +II
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + D A L EM KG+
Sbjct: 266 LCKYKHMDDALNLFKEMETKGI 287
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P N TY+ L++ C+ + G +P++ T + L++G C + R+ +A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + + GY T+ +I+GL EA+AL+ +M +GC P+ +T+ ++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 125 LFENGENDKAEKLLLEMIDKGLLE 148
L + G+ D A LL +M ++G LE
Sbjct: 231 LCKRGDTDLAFNLLNKM-EQGKLE 253
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
VK +P +II ++ LL A+ K + D + G+ + TY+IL++ C+ +L
Sbjct: 73 VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQL 132
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A + ++ GY + T + ++NG C EA+AL+ +M + G PN +TF ++
Sbjct: 133 PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTL 192
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
I LF + + +A L+ M+ KG
Sbjct: 193 IHGLFLHNKASEAMALIDRMVAKG 216
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
K +P I TYN +++ +CK+ V+ +GV+PD+ YN ++ G C+ G ++
Sbjct: 496 KMEPT-IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +F ++ G Y +I ++G + + L+ +M G +A T ++
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVT 613
Query: 124 SLFENGENDKA 134
++ +G DK+
Sbjct: 614 NMLHDGRLDKS 624
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 84/137 (61%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G NI+TYN+LLD LCK+ ++ ++PD+ TYNI+ +G+CKAG+++D
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F L +KG V Y MI+G CK+GL +EA L KM+ +G P++ T+ ++IR+
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 125 LFENGENDKAEKLLLEM 141
+G+ + +L+ EM
Sbjct: 565 HLRDGDKAASAELIKEM 581
Score = 85.9 bits (211), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N +TY +L+ ++ D GV P++ TYN L+DGLCK G+
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ A +F L ++TY +M G+CK G ++ L + ++G P+ I + +
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + G ++A L ++M + G L
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPL 552
Score = 85.9 bits (211), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+++ Y++++D+LCK HVD ++G++PD+ TY+ L+ LC GR DA +
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
D+L + + V T+ +I+ KEG EA L +M PN +T+ S+I
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 128 NGENDKAEKLLLEMIDKGLL 147
+ D+A+++ M+ K L
Sbjct: 358 HDRLDEAQQIFTLMVSKDCL 377
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M VKG +++TY ++++ LCK D ++ D+ Y+ ++D LCK
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA +F ++ KG V TY+ +I+ LC G + +A LLS M PN +TF S
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + G+ +AEKL EMI + +
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSI 341
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
NI+TYNSL++ C +D + PD+ TYN L++G CKA ++ D E+F
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
D+ +G TYT +I+G + D A + +M +G PN +T+ +++ L +N
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 129 GENDKAEKLLLEMIDKGLLE 148
G+ +KA ++ E + K +E
Sbjct: 464 GKLEKA-MVVFEYLQKSKME 482
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G N+ TYN +++ LC+ + G P + T N L++G C R
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 150
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A + ++ GY T+T +++GL + EA+AL+ +M ++GC P+ +T+ +
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLE 148
+I L + GE D A LL +M +KG +E
Sbjct: 211 VINGLCKRGEPDLALNLLNKM-EKGKIE 237
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T+NSL+DA K + + + P++ TYN L++G C RL +AQ+IF
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K V TY +ING CK + + L M G N +T+ ++I F+
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 129 GENDKAEKLLLEMIDKGL 146
+ D A+ + +M+ G+
Sbjct: 429 SDCDNAQMVFKQMVSDGV 446
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T NSLL+ C + + + G QPD T+ L+ GL + + +A
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ +++KG + TY +INGLCK G D AL LL+KME + + + ++I S
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + D A L EM +KG+
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGI 271
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
VK +P +I+ ++ LL A+ K D GV +L TYNI+++ LC+ +L
Sbjct: 57 VKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQL 116
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A I ++ GY ++ T ++NG C EA+AL+ +M G P+ +TF ++
Sbjct: 117 SFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTL 176
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
+ LF++ + +A L+ M+ KG
Sbjct: 177 VHGLFQHNKASEAVALVERMVVKG 200
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++ TY+SL+ LC ++ + P++ T+N L+D K G+
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A+++F +++ + + TY +ING C DEA + + M + C P+ +T+ +
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + + +L +M +GL+
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLV 412
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + +T+ +L+ L + + +G QPDL TY +++GLCK G A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + + V Y+ +I+ LCK D+AL L ++M+ +G P+ T+ S+I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 125 LFENGENDKAEKLLLEMIDK 144
L G A +LL +M+++
Sbjct: 285 LCNYGRWSDASRLLSDMLER 304
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 84/145 (57%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++TYN L++ +CK +D G QP++ T+NI++ +C GR
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
DA+++ D+L KG+ +V T+ ++IN LC++GL A+ +L KM GC PN++++
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
++ + + D+A + L M+ +G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRG 409
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 76/138 (55%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++TYN++L +LC S + + PD+ TY IL++ C+ + A ++
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G V TY V++NG+CKEG DEA+ L+ M GC PN IT I+RS+
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 129 GENDKAEKLLLEMIDKGL 146
G AEKLL +M+ KG
Sbjct: 323 GRWMDAEKLLADMLRKGF 340
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +I+TYN++L ALCK V+ +G P L TYN ++DGL KAG+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A ++ ++ K TY+ ++ GL +EG DEA+ + E G PNA+TF S
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
I+ L ++ + D+A L+ MI++G
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRG 549
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP N ++YN LL CK +D +G PD+ TYN ++ LCK G+++DA
Sbjct: 376 QP-NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
EI + L KG + TY +I+GL K G +A+ LL +M + P+ IT+ S++ L
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 126 FENGENDKAEKLLLEMIDKGL 146
G+ D+A K E G+
Sbjct: 495 SREGKVDEAIKFFHEFERMGI 515
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +++T+N L++ LC+ + G QP+ +YN L+ G CK +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A E ++ +G + + TY M+ LCK+G ++A+ +L+++ +GC+P IT+ +
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L + G+ KA KLL EM K L
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDL 480
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ITYN ++ CK+ ++ V PD+ TYN ++ LC +G+LK A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQA 223
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ +L + + V TYT++I C++ A+ LL +M GCTP+ +T+ ++
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 125 LFENGENDKAEKLLLEMIDKG 145
+ + G D+A K L +M G
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSG 304
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+ KG +ITYN+++D L K+ + ++PD TY+ L+ GL + G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A + FH+ G T+ ++ GLCK D A+ L M GC PN ++
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEK 149
+I L G +A +LL E+ +KGL++K
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKK 588
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G PD+ L+ G C+ G+ + A +I L G V TY VMI+G CK G + A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
L++L +M + +P+ +T+ +I+RSL ++G+ +A ++L M+ +
Sbjct: 192 LSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 103 bits (258), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 86/137 (62%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+TY+ LLD LC + V+ ++PD+ TYNI+++G+CKAG+++D
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F L +KG V TYT M++G C++GL +EA AL +M+ EG P++ T+ ++IR+
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 125 LFENGENDKAEKLLLEM 141
+G+ + +L+ EM
Sbjct: 581 HLRDGDKAASAELIREM 597
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N +TY +L+ ++ D GV PD+ TY+IL+DGLC G+
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A +F L ++TY +MI G+CK G ++ L + ++G PN +T+ +
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ G ++A+ L EM ++G L
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPL 568
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 73/142 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T NSLL+ C + + + G QPD T+N L+ GL + R +A
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ +++KG + TY +++NGLCK G D AL+LL KME P + + +II +
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + A L EM +KG+
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGI 287
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 76/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++TYNSL+ LC ++ + P++ T++ L+D K G+
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A++++ +++ + + TY+ +ING C DEA + M + C PN +T+ +
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I+ + D+ +L EM +GL+
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLV 428
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M VKG +++TY +++ LCK +D ++P + YN ++D LC
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA +F ++ KG V TY +I LC G + +A LLS M PN +TF +
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + G+ +AEKL EMI + +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSI 357
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T+++L+DA K + + + PD+ TY+ L++G C RL +A+ +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K V TY +I G CK DE + L +M G N +T+ ++I F+
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 129 GENDKAEKLLLEMIDKGLL 147
E D A+ + +M+ G+L
Sbjct: 445 RECDNAQIVFKQMVSDGVL 463
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+ TY+ L++ C+ + G +PD+ T N L++G C R
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA + ++ GY T+ +I+GL + EA+AL+ +M ++GC P+ +T+
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLE 148
++ L + G+ D A LL +M ++G +E
Sbjct: 227 VVNGLCKRGDIDLALSLLKKM-EQGKIE 253
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
++ YN+++DALC +V+ ++G++P++ TYN L+ LC GR DA +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
D++ + + V T++ +I+ KEG EA L +M P+ T+ S+I +
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 130 ENDKAEKLLLEMIDK 144
D+A+ + MI K
Sbjct: 376 RLDEAKHMFELMISK 390
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
VK +P +I+ ++ LL A+ K + D + G+ +L TY+IL++ C+ +L
Sbjct: 73 VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQL 132
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A + ++ GY + T ++NG C +A++L+ +M G P++ TF ++
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
I LF + +A L+ M+ KG
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKG 216
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I TY+SL++ C +D + P++ TYN L+ G CKA R+ + E+F
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TYT +I+G + D A + +M +G P+ +T+ ++ L N
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 129 GENDKA 134
G+ + A
Sbjct: 480 GKVETA 485
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (254), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 82/146 (56%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + +T+ L++ CK+ H+ G P++ TY L+DGLCK G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A E+ H++ G + TY ++NGLCK G +EA+ L+ + E G + +T+ +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + ++GE DKA+++L EM+ KGL
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP NI TYNS+++ LCKS +++ G+ D TY LMD CK+G + AQ
Sbjct: 488 QP-NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
EI ++L KG T+ T+ V++NG C G+ ++ LL+ M +G PNA TF S+++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 126 FENGENDKAEKLLLEMIDKGL 146
A + +M +G+
Sbjct: 607 CIRNNLKAATAIYKDMCSRGV 627
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + + Y +L+D CK + + + PD+ TY ++ G C+ G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A ++FH++ KG T+T +ING CK G +A + + M GC+PN +T+ +
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L + G+ D A +LL EM GL
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGL 487
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N++TY +L+D LCK +D G+QP++ TYN +++GLCK+G +++A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ + G + TYT +++ CK G D+A +L +M +G P +TF ++
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+G + EKLL M+ KG+
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGI 592
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG ++I+Y+++++ C+ +D +G++P+ Y ++ LC+ +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A+E F +++ +G YT +I+G CK G A +M TP+ +T+ +
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
II + G+ +A KL EM KGL
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGL 417
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G A+ +TY +L+DA CKS +D +G+QP + T+N+LM+G C G L+D
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+++ + +L KG T+ ++ C A A+ M G P+ T+E++++
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ +A L EM KG
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGF 662
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N Y S++ LC+ + QG+ PD Y L+DG CK G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A + F+++ + V TYT +I+G C+ G EA L +M +G P+++TF
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I + G A ++ MI G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAG 451
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N T+NSL+ C +++ +GV PD TY L+ G CKA
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K+A +F ++ KG+ ++V TY+V+I G K F EA + +M EG + F+
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEK 149
+ ++ D + E+I+ L+++
Sbjct: 707 FSDTKYKGKRPDTIVDPIDEIIENYLVDE 735
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 64/108 (59%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
GV ++ +YNI++ +C+ GR+K+A + + +KGY V +Y+ ++NG C+ G D+
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
L+ M+ +G PN+ + SII L + +AE+ EMI +G+L
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+F + G V +Y ++I+ +C+ G EA LL ME++G TP+ I++ +++
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 127 ENGENDKAEKLLLEMIDKGL 146
GE DK KL+ M KGL
Sbjct: 293 RFGELDKVWKLIEVMKRKGL 312
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (254), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 82/146 (56%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + +T+ L++ CK+ H+ G P++ TY L+DGLCK G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A E+ H++ G + TY ++NGLCK G +EA+ L+ + E G + +T+ +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + ++GE DKA+++L EM+ KGL
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP NI TYNS+++ LCKS +++ G+ D TY LMD CK+G + AQ
Sbjct: 488 QP-NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
EI ++L KG T+ T+ V++NG C G+ ++ LL+ M +G PNA TF S+++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 126 FENGENDKAEKLLLEMIDKGL 146
A + +M +G+
Sbjct: 607 CIRNNLKAATAIYKDMCSRGV 627
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + + Y +L+D CK + + + PD+ TY ++ G C+ G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A ++FH++ KG T+T +ING CK G +A + + M GC+PN +T+ +
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L + G+ D A +LL EM GL
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGL 487
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N++TY +L+D LCK +D G+QP++ TYN +++GLCK+G +++A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ + G + TYT +++ CK G D+A +L +M +G P +TF ++
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+G + EKLL M+ KG+
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGI 592
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG ++I+Y+++++ C+ +D +G++P+ Y ++ LC+ +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A+E F +++ +G YT +I+G CK G A +M TP+ +T+ +
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
II + G+ +A KL EM KGL
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGL 417
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G A+ +TY +L+DA CKS +D +G+QP + T+N+LM+G C G L+D
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+++ + +L KG T+ ++ C A A+ M G P+ T+E++++
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ +A L EM KG
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGF 662
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N Y S++ LC+ + QG+ PD Y L+DG CK G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A + F+++ + V TYT +I+G C+ G EA L +M +G P+++TF
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I + G A ++ MI G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAG 451
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N T+NSL+ C +++ +GV PD TY L+ G CKA
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K+A +F ++ KG+ ++V TY+V+I G K F EA + +M EG + F+
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEK 149
+ ++ D + E+I+ L+++
Sbjct: 707 FSDTKYKGKRPDTIVDPIDEIIENYLVDE 735
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 64/108 (59%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
GV ++ +YNI++ +C+ GR+K+A + + +KGY V +Y+ ++NG C+ G D+
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
L+ M+ +G PN+ + SII L + +AE+ EMI +G+L
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+F + G V +Y ++I+ +C+ G EA LL ME++G TP+ I++ +++
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 127 ENGENDKAEKLLLEMIDKGL 146
GE DK KL+ M KGL
Sbjct: 293 RFGELDKVWKLIEVMKRKGL 312
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCK--- 57
M +G N +TY +L+ L ++ D GV PD+ TYNIL+DGLCK
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 58 ------AGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGC 111
AG+++D ++F L +KG V TYT MI+G CK+G +EA L KM+ +G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 112 TPNAITFESIIRSLFENGENDKAEKLLLEM 141
P++ T+ ++IR+ +G+ + +L+ EM
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
+G+ + TY L+ GL +AG AQEIF +++ G + TY ++++GLCK G ++
Sbjct: 10 RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEK 69
Query: 99 ALA---------LLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
AL L + ++G PN +T+ ++I + G ++A L +M + G L
Sbjct: 70 ALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPL 127
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
+++TYNSL+D C+S + D D+G+ PD TY ++D LCK+ R+++A ++
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F L KG + V YT +I+G CK G DEA +L KM + C PN++TF ++I L
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 128 NGENDKAEKLLLEMIDKGL 146
+G+ +A L +M+ GL
Sbjct: 580 DGKLKEATLLEEKMVKIGL 598
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M+ +G + TY S++D+LCKS V+ +GV P++ Y L+DG CKAG+
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A + +L K T+ +I+GLC +G EA L KM G P T
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I L ++G+ D A +M+ G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSG 632
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
NI TYN +++ CK +V+ + G+ PD TY L+ G C+ L A ++
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F+++ +KG YT +I+GLC DEA+ L KM+ + C P T+ +I+SL
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 128 NGENDKAEKLLLEMIDKGL 146
+ +A L+ EM + G+
Sbjct: 336 SERKSEALNLVKEMEETGI 354
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N++ Y +L+D CK+ VD + P+ T+N L+ GLC G+LK+
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + ++ G TV T T++I+ L K+G FD A + +M G P+A T+ + I+
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ G AE ++ +M + G+
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGV 668
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G NI TY L+D+LC + ++G+ P++ TYN L++G CK G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++DA ++ + + TY +I G CK + +A+ +L+KM P+ +T+ S
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNS 467
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I +G D A +LL M D+GL+
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + N TYN L+ CKS+ V ++ V PD+ TYN L+DG C++G
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A + + +G TYT MI+ LCK +EA L +E +G PN + + +
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + G+ D+A +L +M+ K L
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
+ TY L+ +LC S + G++P++ TY +L+D LC + + A+E+
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+L KG V TY +ING CK G+ ++A+ ++ ME +PN T+ +I+ +
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 128 NGENDKAEKLLLEMIDKGLL 147
+ + KA +L +M+++ +L
Sbjct: 441 SNVH-KAMGVLNKMLERKVL 459
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG N + Y L+ LC + +D D P + TY +L+ LC + R
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A + ++ G +HTYTV+I+ LC + F++A LL +M +G PN IT+ +
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 121 IIRSLFENG 129
+I + G
Sbjct: 399 LINGYCKRG 407
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN+LL++L + VD + V P++ TYN +++G CK G +++A + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
G TYT +I G C+ D A + ++M ++GC N + + +I L D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 133 KAEKLLLEMID 143
+A L ++M D
Sbjct: 306 EAMDLFVKMKD 316
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP + T L+ L K D G +PD TY + C+ GRL DA+
Sbjct: 599 QPT-VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
++ + G + TY+ +I G G + A +L +M GC P+ TF S+I+ L
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 126 FE 127
E
Sbjct: 718 LE 719
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%)
Query: 48 YNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME 107
YN L++ L + G + + ++++ ++L ++TY M+NG CK G +EA +SK+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 108 IEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
G P+ T+ S+I + + D A K+ EM KG
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 18/159 (11%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + TY + + C+ + + GV PDL TY+ L+ G G+
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGL------------------FDEALAL 102
A ++ + G + HT+ +I L + FD + L
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 103 LSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
L KM TPNA ++E +I + E G AEK+ M
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
P+ ++ +N+LL CK + G P L + +L+ GL K G +
Sbjct: 793 SPSELV-FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+F +LL GY+ + ++I+G+ K+GL + L + ME GC ++ T+ +I
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 85/142 (59%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+TYN LLD LC + +V+ + ++ D+ TY +++ LCKAG+++D
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F L +KG V TYT M++G C++GL +EA AL +M+ +G PN+ T+ ++IR+
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+G+ + +L+ EM G
Sbjct: 541 RLRDGDEAASAELIKEMRSCGF 562
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M VKG +++TY ++++ LCK D ++ D+ YN ++DGLCK
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA ++F+ + KG V TY +I+ LC G + +A LLS M + P+ + F +
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 121 IIRSLFENGENDKAEKLLLEMI 142
+I + + G+ +AEKL EM+
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMV 347
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+++ YN+++D LCK H+D +G++PD+ TYN L+ LC GR DA +
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM-EIEGCTPNAITFESIIRSLF 126
D+L K + + + +I+ KEG EA L +M + + C P+ + + ++I+
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 127 ENGENDKAEKLLLEMIDKGLL 147
+ ++ ++ EM +GL+
Sbjct: 368 KYKRVEEGMEVFREMSQRGLV 388
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+ TY+ ++ C+ + G P + T N L++G C R+ +A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ GY T+T +++GL + EA+AL+ +M ++GC P+ +T+ ++I
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 125 LFENGENDKAEKLLLEMIDKGLLE 148
L + GE D A LL +M +KG +E
Sbjct: 225 LCKRGEPDLALNLLNKM-EKGKIE 247
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T NSLL+ C + + + G QPD T+ L+ GL + + +A
Sbjct: 140 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 199
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ +++KG + TY +INGLCK G D AL LL+KME + + + +II
Sbjct: 200 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDG 259
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + D A L +M KG+
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGI 281
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + +T+ +L+ L + + +G QPDL TY +++GLCK G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + + V Y +I+GLCK D+A L +KME +G P+ T+ +I
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L G A +LL +M++K +
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNI 316
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
VK +P +I+ ++ LL A+ K + D + G+ +L TY+I ++ C+ +L
Sbjct: 67 VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQL 126
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A I ++ GY ++ T ++NG C EA+AL+ +M G P+ +TF ++
Sbjct: 127 SLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTL 186
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
+ LF++ + +A L+ M+ KG
Sbjct: 187 VHGLFQHNKASEAVALVERMVVKG 210
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 67/138 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++ YN+L+ CK V+ +G+ + TY L+ G +A +AQ +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G H + TY ++++GLC G + AL + M+ + +T+ ++I +L +
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ + L + KG+
Sbjct: 475 GKVEDGWDLFCSLSLKGV 492
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + +I+TY ++++ALCK+ V+ +GV+P++ TY +M G C+ G
Sbjct: 452 MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 511
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA--LLSKMEIEGCTPNAITF 118
++A +F ++ G TY +I ++G DEA + L+ +M G +A TF
Sbjct: 512 KEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG--DEAASAELIKEMRSCGFAGDASTF 569
Query: 119 ESIIRSLFENGENDKA 134
++ ++ +G DK+
Sbjct: 570 -GLVTNMLHDGRLDKS 584
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 9 NIITYNSLLDALCKSHH-VDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
+++ +N+L+DA K V+ + PD+ YN L+ G CK R+++ E+
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F ++ +G TYT +I+G + D A + +M +G P+ +T+ ++ L
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 128 NGENDKA 134
NG + A
Sbjct: 439 NGNVETA 445
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 76/133 (57%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +TYN+L+ LCK + V+ +G+ PD+CT+N L+ GLC + A E+F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG TY ++I+ LC +G DEAL +L +ME+ GC + IT+ ++I +
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 129 GENDKAEKLLLEM 141
+ +AE++ EM
Sbjct: 484 NKTREAEEIFDEM 496
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQ-GVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
++ N ++ CK V+ +Q G PD T+N L++GLCKAG +K A EI
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
+L +GY V+TY +I+GLCK G EA+ +L +M C+PN +T+ ++I +L +
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 130 ENDKAEKLLLEMIDKGLL 147
+ ++A +L + KG+L
Sbjct: 380 QVEEATELARVLTSKGIL 397
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 78/146 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G ++ITYN+L+D CK++ GV + TYN L+DGLCK+ R
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++DA ++ ++++G +TY ++ C+ G +A ++ M GC P+ +T+ +
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L + G + A KLL + KG+
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + TYN L+D+LC +D G + TYN L+DG CKA +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++A+EIF ++ + G TY +I+GLCK ++A L+ +M +EG P+ T+ S
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
++ G+ KA ++ M G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNG 570
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V G N +TYN+L+D LCKS V+ +G +PD TYN L+ C+ G
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K A +I + G + TY +I+GLCK G + A LL ++++G +
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 615
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
+I+ LF + +A L EM+++
Sbjct: 616 VIQGLFRKRKTTEAINLFREMLEQ 639
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T+N+L++ LCK+ HV +G PD+ TYN ++ GLCK G +K+A E+ +
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ + TY +I+ LCKE +EA L + +G P+ TF S+I+ L +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 132 DKAEKLLLEMIDKG 145
A +L EM KG
Sbjct: 417 RVAMELFEEMRSKG 430
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG ++ T+NSL+ LC + + +G +PD TYN+L+D LC G+L +
Sbjct: 394 KGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + + + G +V TY +I+G CK EA + +ME+ G + N++T+ ++I
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 124 SLFENGENDKAEKLLLEMIDKG 145
L ++ + A +L+ +MI +G
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEG 535
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V G ++ T+N L+ ALC++H + G+ PD T+ +M G + G
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIE-GCTPNAITFE 119
L A I ++ G + + V+++G CKEG ++AL + +M + G P+ TF
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKG 145
+++ L + G A +++ M+ +G
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEG 325
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN +L+ L + + G++PD+ T+N+L+ LC+A +L+ A + D+
Sbjct: 157 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 216
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
G T+T ++ G +EG D AL + +M GC+ + ++ I+ + G +
Sbjct: 217 SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 133 KAEKLLLEMIDK 144
A + EM ++
Sbjct: 277 DALNFIQEMSNQ 288
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G++PD YN +++ L LK + + + G V T+ V+I LC+ A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
+ +L M G P+ TF ++++ E G+ D A ++ +M++ G
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++TY SL++ LC S +VD +G++P++ TY+ LMDGLCK GR A E+F
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF 285
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G + TYT +I GLCKE EA+ LL +M ++G P+A + +I
Sbjct: 286 EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAI 345
Query: 129 GENDKAEKLLLEMIDKGL 146
+ +A L EMI G+
Sbjct: 346 SKFREAANFLDEMILGGI 363
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSH-HVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAG 59
M G P + + N L+ ALC++ VD +G PD TY L+ GLC+ G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
R+ +A+++F +++ K TV TYT +INGLC DEA+ L +M+ +G PN T+
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKG 145
S++ L ++G + +A +L M+ +G
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARG 292
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + TY +L+ LC+ +D ++ P + TY L++GLC +
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A ++ KG V TY+ +++GLCK+G +A+ L M GC PN +T+ +
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L + + +A +LL M +GL
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGL 328
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N+ TY+SL+D LCK +G +P++ TY L+ GLCK +
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQK 312
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF-- 118
+++A E+ + ++G Y +I+G C F EA L +M + G TPN +T+
Sbjct: 313 IQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI 372
Query: 119 -----ESIIRSLFENGENDKAEKLLLEMIDKGL 146
++R L N + +A L L M +G+
Sbjct: 373 HVKTSNEVVRGLCANYPS-RAFTLYLSMRSRGI 404
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ-EIFHD 70
Y ++L L + + ++ + G+ P + + N+L+ LC+ DA +IF +
Sbjct: 123 AYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLE 182
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ +G +TY +I+GLC+ G DEA L ++M + C P +T+ S+I L +
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 131 NDKAEKLLLEMIDKGL 146
D+A + L EM KG+
Sbjct: 243 VDEAMRYLEEMKSKGI 258
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 80/137 (58%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P +I+TY+ LLD LC + ++ ++ D+ Y +++G+CKAG++ D
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F L +KG V TY MI+GLC + L EA ALL KM+ +G PN+ T+ ++IR+
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Query: 125 LFENGENDKAEKLLLEM 141
+G+ + +L+ EM
Sbjct: 585 HLRDGDKAASAELIREM 601
Score = 82.8 bits (203), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T+N+L+DA K + + PD+ TYN L++G C RL A+++F
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K V TY +I G CK ++ L +M G + +T+ ++I+ LF +
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ D A+K+ +M+ G+
Sbjct: 449 GDCDNAQKVFKQMVSDGV 466
Score = 82.4 bits (202), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 73/137 (53%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+++ +N+++D+LCK HVD +G++P++ TY+ L+ LC GR DA ++
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
D++ K + + T+ +I+ KEG F EA L M P+ T+ S++
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 128 NGENDKAEKLLLEMIDK 144
+ DKA+++ M+ K
Sbjct: 378 HDRLDKAKQMFEFMVSK 394
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 74/147 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++TY+SL+ LC ++ + P+L T+N L+D K G+
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A++++ D++ + + TY ++NG C D+A + M + C P+ +T+ +
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I+ ++ + +L EM +GL+
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLV 432
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N++TY +++ LCK D ++ D+ +N ++D LCK
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA +F ++ KG V TY+ +I+ LC G + +A LLS M + PN +TF +
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + G+ +AEKL +MI + +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSI 361
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I TYNSL++ C +D + PD+ TYN L+ G CK+ R++D E+F
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TYT +I GL +G D A + +M +G P+ +T+ ++ L N
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 129 GENDKAEKLLLEMID 143
G+ +KA LE+ D
Sbjct: 484 GKLEKA----LEVFD 494
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + IT+ +L+ L + +G QP+L TY ++++GLCK G A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + + V + +I+ LCK D+AL L +ME +G PN +T+ S+I
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 125 LFENGENDKAEKLLLEMIDK 144
L G A +LL +MI+K
Sbjct: 305 LCSYGRWSDASQLLSDMIEK 324
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
+ TYN L++ C+ + G +P + T + L++G C R+ DA +
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
++ GY T+T +I+GL EA+AL+ +M GC PN +T+ ++ L + G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 130 ENDKAEKLLLEM 141
+ D A LL +M
Sbjct: 240 DTDLALNLLNKM 251
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T +SLL+ C + + G +PD T+ L+ GL + +A
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ +G + TY V++NGLCK G D AL LL+KME + + F +II S
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + D A L EM KG+
Sbjct: 270 LCKYRHVDDALNLFKEMETKGI 291
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
VK +P +I+ +N LL A+ K D + L TYNIL++ C+ ++
Sbjct: 77 VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQI 136
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A + ++ GY ++ T + ++NG C +A+AL+ +M G P+ ITF ++
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
I LF + + +A L+ M+ +G
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRG 220
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++TYN+L+ CKS V+ +G+ D TY L+ GL G +AQ++F
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G + TY+++++GLC G ++AL + M+ + + ++I + +
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ D L + KG+
Sbjct: 519 GKVDDGWDLFCSLSLKGV 536
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 75/138 (54%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+I+YNSL++ LC + GVQP+L TYN L++G CK LK+A ++F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ +G T Y ++I+ CK G D+ AL +ME EG P+ T+ +I L N
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 129 GENDKAEKLLLEMIDKGL 146
G + A+KL ++ KGL
Sbjct: 450 GNIEAAKKLFDQLTSKGL 467
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCK---SHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCK 57
M V G N+++YN+L+D CK + + + V P+L T+NIL+DG K
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 58 AGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAIT 117
L + ++F ++L + V +Y +INGLC G EA+++ KM G PN IT
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 118 FESIIRSLFEN 128
+ ++I +N
Sbjct: 369 YNALINGFCKN 379
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+ITYN+L++ CK+ + QG P YN+L+D CK G+
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ D + ++ +G V TY +I GLC+ G + A L ++ +G P+ +TF
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHI 475
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ GE+ KA LL EM GL
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGL 501
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++ TYN L+ LC++ +++ +G+ PDL T++ILM+G C+ G
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIE-GCTPNAITFE 119
+ A + ++ G TY +++ G CKEG A + ++ME E N ++
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGLL 147
+++ + G+ + A LL EM++KGL+
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCK---AGR 60
K QP N+ T+N +++ALCK+ ++ G P++ +YN L+DG CK G+
Sbjct: 218 KIQP-NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A + +++ + T+ ++I+G K+ ++ + +M + PN I++ S
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
+I L G+ +A + +M+ G+ L
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNL 366
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCK---EGL 95
+ +QP++ T+N++++ LCK G++ A+++ D+ + G V +Y +I+G CK G
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 96 FDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
+A A+L +M +PN TF +I +++ + K+ EM+D+
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG P +++T++ L++ C+ G++P TYNI+M G CK G LK
Sbjct: 465 KGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 64 AQEIFHDLLI-KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
A + + + + V +Y V++ G ++G ++A LL++M +G PN IT+E +
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVK 583
Query: 123 RSLFENG 129
+ + G
Sbjct: 584 EEMVDQG 590
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 51 LMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG 110
LM L K R D + ++ +++ + V T+ V+IN LCK G ++A ++ M++ G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 111 CTPNAITFESIIRS---LFENGENDKAEKLLLEMID 143
C+PN +++ ++I L NG+ KA+ +L EM++
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 96.7 bits (239), Expect = 5e-21, Method: Composition-based stats.
Identities = 52/141 (36%), Positives = 79/141 (56%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V+G P +++ Y L+D L K+ + + P++ TY L+DGLCKAG
Sbjct: 320 MVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 379
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A+ I +L K V TY+ MING K+G+ +EA++LL KME + PN T+ +
Sbjct: 380 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+I LF+ G+ + A +L EM
Sbjct: 440 VIDGLFKAGKEEMAIELSKEM 460
Score = 81.6 bits (200), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 77/139 (55%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +TY +L+D+L K++ +G+ DL Y +LMDGL KAG L++A++ F
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
LL V TYT +++GLCK G A ++++M + PN +T+ S+I +
Sbjct: 353 KMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKK 412
Query: 129 GENDKAEKLLLEMIDKGLL 147
G ++A LL +M D+ ++
Sbjct: 413 GMLEEAVSLLRKMEDQNVV 431
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA---- 64
+ +TYN+++ LC+ D G+ PD +YN L+DG CK G A
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 65 ------------------------QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
+E + D+++ G+ V T++ +IN LCK G E
Sbjct: 220 DEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG 279
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
LL +ME PN +T+ +++ SLF+ A L +M+ +G+
Sbjct: 280 LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI 325
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 68/146 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + +T+NSL+ HV + G+ P++ TYN ++ GL AG
Sbjct: 704 MEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGL 763
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K+ + ++ +G TY +I+G K G ++ + +M +G P T+
Sbjct: 764 IKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNV 823
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I G+ +A +LL EM +G+
Sbjct: 824 LISEFANVGKMLQARELLKEMGKRGV 849
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
GV PD+ N+L+ CK GRL A + + +I I TY +I+GLC+ GL DEA
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVIS---IDTVTYNTVISGLCEHGLADEA 180
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
LS+M G P+ +++ ++I + G +A+ L+ E+ + L+
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI 228
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 59/137 (43%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN+L+ LCK +G PD T+N LM G ++ A + ++
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
G V TY +I GL GL E LS+M+ G P+ T+ ++I + G
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 800
Query: 133 KAEKLLLEMIDKGLLEK 149
+ + EMI GL+ K
Sbjct: 801 GSMTIYCEMIADGLVPK 817
Score = 60.1 bits (144), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 61/138 (44%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ TY LD K D G++ YN L+ LCK G K A +
Sbjct: 642 NLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVM 701
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
D+ +G+ T+ +++G +AL+ S M G +PN T+ +IIR L +
Sbjct: 702 GDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDA 761
Query: 129 GENDKAEKLLLEMIDKGL 146
G + +K L EM +G+
Sbjct: 762 GLIKEVDKWLSEMKSRGM 779
Score = 59.3 bits (142), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 7/155 (4%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+ TYN+++ L + + +G++PD TYN L+ G K G
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K + I+ +++ G TY V+I+ G +A LL +M G +PN T+ +
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 858
Query: 121 IIRSLFE-----NGENDKAEKLLLEMIDKGLLEKL 150
+I L + + E +K L E KGLL+++
Sbjct: 859 MISGLCKLCTHPDVEWNKKAMYLAEA--KGLLKEM 891
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 69/138 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++TY+S+++ K ++ DQ V P+ TY ++DGL KAG+ + A E+
Sbjct: 398 NVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 457
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ + G + ++N L + G E L+ M +G T + I + S+I F+
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 517
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ + A EM ++G+
Sbjct: 518 GDEEAALAWAEEMQERGM 535
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + I Y SL+D K + ++G+ D+ +YN+L+ G+ K G+
Sbjct: 495 MVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK 554
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A + + KG + T+ +M+N K+G + L L KM+ G P+ ++
Sbjct: 555 V-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNI 613
Query: 121 IIRSLFENGENDKAEKLLLEMI 142
++ L ENG+ ++A +L +M+
Sbjct: 614 VVGMLCENGKMEEAIHILNQMM 635
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 62/142 (43%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++++ N ++ LC++ ++ + P+L TY I +D K R
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 662
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ LL G ++ Y +I LCK G+ +A ++ ME G P+ +TF S++
Sbjct: 663 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 722
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
F KA M++ G+
Sbjct: 723 YFVGSHVRKALSTYSVMMEAGI 744
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G P ++++YN L+ + K V ++G++PD+ T+NI+M+ K G
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMR-EKGIEPDIATFNIMMNSQRKQGD 588
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF 118
+ +++ + G ++ + +++ LC+ G +EA+ +L++M + PN T+
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY 646
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 13/157 (8%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + TYN+L+ K ++ G+ P TYN+L+ G+
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGK 833
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLC------------KEGLFDEALALLSKM-E 107
+ A+E+ ++ +G TY MI+GLC K EA LL +M E
Sbjct: 834 MLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVE 893
Query: 108 IEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
+G P T I + + G AE+ L E K
Sbjct: 894 EKGYIPCNQTIYWISAAFSKPGMKVDAERFLKECYKK 930
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
+ N++TY +LLD CKSH V+ +G +P+ Y+ L+DGLCK G+L +A
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
QE+ ++ G+ T++TY+ +I+ K D A +LSKM C PN + + +I
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG 753
Query: 125 LFENGENDKAEKLLLEMIDKG 145
L + G+ D+A KL+ M +KG
Sbjct: 754 LCKVGKTDEAYKLMQMMEEKG 774
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 16/162 (9%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N++TY +L+ A K+ V +G P++ TY+ L+DG CKAG+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 61 LKDAQEIFH-----------DLLIKGY-----HITVHTYTVMINGLCKEGLFDEALALLS 104
++ A +IF D+ K Y V TY +++G CK +EA LL
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 105 KMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
M +EGC PN I ++++I L + G+ D+A+++ EM + G
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G PA + TY+SL+D K D + P++ Y ++DGLCK G+
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A ++ + KG V TYT MI+G G + L LL +M +G PN +T+
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+I +NG D A LL EM
Sbjct: 820 LIDHCCKNGALDVAHNLLEEM 840
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N I +S LC + + QG PD TY+ +++ LC A +
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A +F ++ G V+TYT+M++ CK GL ++A ++M GCTPN +T+ +
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
+I + + + A +L M+ +G L +
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXX----------------XXXXXXXXDQGVQPD 44
M +G NI+TY++L+D CK+ V+ D +P+
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 45 LCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLS 104
+ TY L+DG CK+ R+++A+++ + ++G Y +I+GLCK G DEA + +
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 105 KMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMID 143
+M G T+ S+I F+ D A K+L +M++
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + TY+ +L+ LC + ++ G+ D+ TY I++D CKAG ++
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A++ F+++ G V TYT +I+ K A L M EGC PN +T+ ++I
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 124 SLFENGENDKAEKLLLEM 141
+ G+ +KA ++ M
Sbjct: 597 GHCKAGQVEKACQIFERM 614
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++ Y ++D LCK D ++G QP++ TY ++DG G+++ E+
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME 107
+ KG TY V+I+ CK G D A LL +M+
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++TY +++D ++ +GV P+ TY +L+D CK G
Sbjct: 770 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 829
Query: 61 LKDAQEIFHDLL--IKGYHITVHT--YTVMINGLCKEGLFDEALALLSKMEIEGCTPNAI 116
L ++ H+LL +K H HT Y +I G KE F E+L LL ++ + P
Sbjct: 830 L----DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLS 883
Query: 117 TFESIIRSLFENGENDKAEKLLLEM 141
+ +I +L + + A +LL E+
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEV 908
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%)
Query: 43 PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL 102
PD Y L+ GLC+A ++A + + + V TY+ ++ G + +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 103 LSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
L+ M +EGC P+ F S++ + +G++ A KLL +M+ G
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 43 PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVH--TYTVMINGLCKEGLFDEAL 100
P L Y +L+D L KA RL+ A + ++ + + TY +I LC + A
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMI 142
L S+M +G P +F S+I+ LF N + +A LLL+ I
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA-LLLLDFI 980
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 95.9 bits (237), Expect = 8e-21, Method: Composition-based stats.
Identities = 61/178 (34%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G AN +TY+ L+ C+S + GV PD+ TY IL+DGLC G+L+
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 64 AQEIFHDLL-----------------------------------IKGYHITVHTYTVMIN 88
A EIF DL KG V TYTVMI+
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 89 GLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
GLCK+G EA LL KME +G PN T+ ++IR+ +G+ + KL+ EM G
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 83.6 bits (205), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP +++TYNS+++ +C+S ++ V+ D+ TY+ ++D LC+ G + A
Sbjct: 190 QP-DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+F ++ KG +V TY ++ GLCK G +++ LL M PN ITF ++
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 126 FENGENDKAEKLLLEMIDKGL 146
+ G+ +A +L EMI +G+
Sbjct: 309 VKEGKLQEANELYKEMITRGI 329
Score = 82.0 bits (201), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 78/147 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++++TYNSL+ LCK+ + + + P++ T+N+L+D K G+
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L++A E++ +++ +G + TY +++G C + EA +L M C+P+ +TF S
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I+ D K+ + +GL+
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLV 400
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 76/143 (53%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + T+N+L+ L V + G QPD+ TYN +++G+C++G A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ + + V TY+ +I+ LC++G D A++L +ME +G + +T+ S++R
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
L + G+ + LL +M+ + ++
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIV 295
Score = 77.0 bits (188), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+IT+N LLD K + +G+ P++ TYN LMDG C RL +A +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 69 HDLLIKGY-HITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
DL+++ + T+T +I G C D+ + + + G NA+T+ +++ +
Sbjct: 357 -DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 128 NGENDKAEKLLLEMIDKGLL 147
+G+ AE+L EM+ G+L
Sbjct: 416 SGKIKLAEELFQEMVSHGVL 435
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 69/141 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G NIITYN+L+D C + + PD+ T+ L+ G C R
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ D ++F ++ +G TY++++ G C+ G A L +M G P+ +T+
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 121 IIRSLFENGENDKAEKLLLEM 141
++ L +NG+ +KA ++ ++
Sbjct: 444 LLDGLCDNGKLEKALEIFEDL 464
Score = 73.6 bits (179), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 72/142 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + A++ TY++++D+LC+ +D +G++ + TYN L+ GLCKAG+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
D + D++ + V T+ V+++ KEG EA L +M G +PN IT+ +
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 121 IIRSLFENGENDKAEKLLLEMI 142
++ +A +L M+
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMV 360
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 72/138 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I+T+ SL+ C VD +G+ + TY+IL+ G C++G++K A+E+F
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ G V TY ++++GLC G ++AL + ++ + + +II + +
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ + A L + KG+
Sbjct: 487 GKVEDAWNLFCSLPCKGV 504
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
++ +P +++ ++ A+ ++ + G+ ++ T NI+++ C+ +
Sbjct: 80 IRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKT 139
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A + ++ GY T+ +I GL EG EA+ L+ +M GC P+ +T+ SI
Sbjct: 140 CFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSI 199
Query: 122 IRSLFENGENDKAEKLLLEMIDKGL 146
+ + +G+ A LL +M ++ +
Sbjct: 200 VNGICRSGDTSLALDLLRKMEERNV 224
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + ITY SL+D CK +H+D +G P++ T+NIL++G CKA R+ D
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
E+F + ++G TY +I G C+ G + A L +M PN +T++ ++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 124 SLFENGENDKAEKLLLEMIDKGLLE 148
L +NGE++KA + + E I+K +E
Sbjct: 482 GLCDNGESEKALE-IFEKIEKSKME 505
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + P NI+TY LLD LC + + ++ D+ YNI++ G+C A +
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA ++F L +KG V TY +MI GLCK+G EA L KME +G P+ T+
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+IR+ +G+ K+ KL+ E+
Sbjct: 584 LIRAHLGDGDATKSVKLIEEL 604
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP N +TY +L+ +CKS ++ ++ D Y+I++DGLCK G L +A
Sbjct: 225 QP-NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+F+++ +KG + TY ++I G C G +D+ LL M PN +TF +I S
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 126 FENGENDKAEKLLLEMIDKGL 146
+ G+ +AE+L EMI +G+
Sbjct: 344 VKEGKLREAEELHKEMIHRGI 364
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG NIITYN L+ C + D + + P++ T+++L+D K G+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L++A+E+ +++ +G TYT +I+G CKE D+A ++ M +GC PN TF
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + D +L +M +G++
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVV 435
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 71/136 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T++ L+D+ K + +G+ PD TY L+DG CK L A ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG + T+ ++ING CK D+ L L KM + G + +T+ ++I+ E
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 129 GENDKAEKLLLEMIDK 144
G+ + A++L EM+ +
Sbjct: 452 GKLNVAKELFQEMVSR 467
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++IT N+L++ LC S + G QP+ TY +++ +CK+G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ + + + Y+++I+GLCK G D A L ++ME++G T N IT+ +I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 125 LFENGENDKAEKLLLEMIDK 144
G D KLL +MI +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKR 327
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+ Y+ ++D LCK +D +G+ ++ TYNIL+ G C AGR D ++ D
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
++ + + V T++V+I+ KEG EA L +M G P+ IT+ S+I +
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 131 NDKAEKLLLEMIDKG 145
DKA +++ M+ KG
Sbjct: 384 LDKANQMVDLMVSKG 398
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG NI T+N L++ CK++ +D +GV D TYN L+ G C+ G+
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A+E+F +++ + + TY ++++GLC G ++AL + K+E + +
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
II + + D A L + KG+
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGV 539
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+H + P +I ++ L A+ K+ D +G+ +L T +I+++ C+ +
Sbjct: 80 IHSRPLPT-VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A ++ GY T++ +INGLC EG EAL L+ +M G P+ IT +
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
++ L +G+ +A L+ +M++ G
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYG 223
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I YN ++ +C + VD +GV+P + TYNI++ GLCK G L +A+ +F
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ G+ TY ++I +G +++ L+ +++ G + +A T + +I L
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML--- 623
Query: 129 GENDKAEKLLLEMI 142
+ + +K L+M+
Sbjct: 624 -SDGRLKKSFLDML 636
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P +I+TY+ LLD LC + ++ ++ D+ Y +++G+CKAG++ D
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F L +KG V TY MI+GLC + L EA ALL KM+ +G P++ T+ ++IR+
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Query: 125 LFENGENDKAEKLLLEM 141
+G+ + +L+ EM
Sbjct: 510 HLRDGDKAASAELIREM 526
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + +TY +L+ L D GV PD+ TY+IL+DGLC G+
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ A E+F + + ++ YT MI G+CK G D+ L + ++G PN +T+ +
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L +A LL +M + G L
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPL 497
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+++ +N+++D+LCK HVD +G++P++ TY+ L+ LC GR DA ++
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
D++ K + + T+ +I+ KEG F EA L M P+ T+ S+I
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 128 NGENDKAEKLLLEMIDK 144
+ DKA+++ M+ K
Sbjct: 303 HDRLDKAKQMFEFMVSK 319
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T+N+L+DA K + + PD+ TYN L++G C RL A+++F
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K + TY +I G CK ++ L +M G + +T+ ++I+ LF +
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ D A+K+ +M+ G+
Sbjct: 374 GDCDNAQKVFKQMVSDGV 391
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N++TY +++ LCK +D ++ D+ +N ++D LCK
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA +F ++ KG V TY+ +I+ LC G + +A LLS M + PN +TF +
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + G+ +AEKL +MI + +
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSI 286
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++TY+SL+ LC ++ + P+L T+N L+D K G+
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A+++ D++ + + TY +ING C D+A + M + C P+ T+ +
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I+ ++ + +L EM +GL+
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLV 357
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I TYNSL++ C +D + PDL TYN L+ G CK+ R++D E+F
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TYT +I GL +G D A + +M +G P+ +T+ ++ L N
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 129 GENDKAEKLLLEMID 143
G+ +KA LE+ D
Sbjct: 409 GKLEKA----LEVFD 419
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + IT+ +L+ L + +G QP+L TY ++++GLCK G + A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + + V + +I+ LCK D+AL L +ME +G PN +T+ S+I
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 125 LFENGENDKAEKLLLEMIDK 144
L G A +LL +MI+K
Sbjct: 230 LCSYGRWSDASQLLSDMIEK 249
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+ TYN L++ C+ + G +P + T + L++G C R
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA + ++ GY T+T +I+GL EA+AL+ +M GC PN +T+
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 121 IIRSLFENGENDKAEKLLLEM 141
++ L + G+ D A LL +M
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKM 176
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T +SLL+ C + + G +PD T+ L+ GL + +A
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ +G + TY V++NGLCK G D A LL+KME + + F +II S
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + D A L EM KG+
Sbjct: 195 LCKYRHVDDALNLFKEMETKGI 216
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
VK +P +I +N LL A+ K D G+ +L TYNIL++ C+ ++
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A + ++ GY ++ T + ++NG C +A+AL+ +M G P+ ITF ++
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
I LF + + +A L+ M+ +G
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRG 145
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN+L+ CKS V+ +G+ D TY L+ GL G +AQ++F +
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ G + TY+++++GLC G ++AL + M+ + + ++I + + G+
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 132 DKAEKLLLEMIDKGL 146
D L + KG+
Sbjct: 447 DDGWDLFCSLSLKGV 461
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 95.1 bits (235), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 79/147 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG N +TYN+L+ LC +D P+ TY L++GL K R
Sbjct: 283 MFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
DA + + +GYH+ H Y+V+I+GL KEG +EA++L KM +GC PN + +
Sbjct: 343 ATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSV 402
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ L G+ ++A+++L MI G L
Sbjct: 403 LVDGLCREGKPNEAKEILNRMIASGCL 429
Score = 91.3 bits (225), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 71/134 (52%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY +L+D LCK +D +G P YN+L+DGLCK G L ++ ++
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+KG TY +I+GLC +G D+A++LL +M C PN +T+ ++I L +
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 132 DKAEKLLLEMIDKG 145
A +LL M ++G
Sbjct: 344 TDAVRLLSSMEERG 357
Score = 84.3 bits (207), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/134 (34%), Positives = 72/134 (53%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +++N ++ ALCK VD ++ PD TY LMDGLCK R+ +A +
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G + Y V+I+GLCK+G L+ M ++GC PN +T+ ++I L
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 129 GENDKAEKLLLEMI 142
G+ DKA LL M+
Sbjct: 306 GKLDKAVSLLERMV 319
Score = 76.3 bits (186), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 70/142 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG NI+ Y+ L+D LC+ + G P+ TY+ LM G K G
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++A +++ ++ G Y+V+I+GLC G EA+ + SKM G P+ + + S
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 121 IIRSLFENGENDKAEKLLLEMI 142
II+ L G D A KL EM+
Sbjct: 508 IIKGLCGIGSMDAALKLYHEML 529
Score = 70.1 bits (170), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N Y+ L+ L K + ++G +P++ Y++L+DGLC+ G+
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A+EI + ++ G +TY+ ++ G K GL +EA+ + +M+ GC+ N +
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L G +A + +M+ G+
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGI 498
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N Y+ L+D LC V G++PD Y+ ++ GLC G
Sbjct: 458 MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS 517
Query: 61 LKDAQEIFHDLLIK---GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAIT 117
+ A +++H++L + V TY ++++GLC + A+ LL+ M GC P+ IT
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Query: 118 FESIIRSLFENGEN-DKAEKLLLEMI 142
+ + +L E + DK L E++
Sbjct: 578 CNTFLNTLSEKSNSCDKGRSFLEELV 603
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 61/108 (56%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
+ + P+ ++N+++ LCK + A E+F + + +TY +++GLCKE D
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
EA+ LL +M+ EGC+P+ + + +I L + G+ + KL+ M KG
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP N +TY +L+ +CKS ++ ++ D Y+I++DGLCK G L +A
Sbjct: 225 QP-NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+F+++ IKG+ + TY +I G C G +D+ LL M +PN +TF +I S
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 126 FENGENDKAEKLLLEMIDKGL 146
+ G+ +A++LL EM+ +G+
Sbjct: 344 VKEGKLREADQLLKEMMQRGI 364
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 73/134 (54%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N ITYNSL+D CK + ++ +G PD+ T+NIL++G CKA R
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ D E+F ++ ++G TY ++ G C+ G + A L +M P+ ++++
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 121 IIRSLFENGENDKA 134
++ L +NGE +KA
Sbjct: 479 LLDGLCDNGELEKA 492
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 79/147 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG A+IITYN+L+ C + D + + P++ T+++L+D K G+
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L++A ++ +++ +G TY +I+G CKE +EA+ ++ M +GC P+ +TF
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + D +L EM +G++
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVI 435
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 76/136 (55%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T++ L+D+ K + +G+ P+ TYN L+DG CK RL++A ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG + T+ ++ING CK D+ L L +M + G N +T+ ++++ ++
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 129 GENDKAEKLLLEMIDK 144
G+ + A+KL EM+ +
Sbjct: 452 GKLEVAKKLFQEMVSR 467
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+ Y+ ++D LCK +D +G + D+ TYN L+ G C AGR D ++ D
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
++ + V T++V+I+ KEG EA LL +M G PN IT+ S+I +
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 131 NDKAEKLLLEMIDKG 145
++A +++ MI KG
Sbjct: 384 LEEAIQMVDLMISKG 398
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M ++G AN +TYN+L+ C+S ++ + V+PD+ +Y IL+DGLC G
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ A EIF + + + Y ++I+G+C D+A L + ++G +A +
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I L KA+ L +M ++G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEG 573
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +IT N+L++ LC + V + G QP+ TY +++ +CK+G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ + + + Y+++I+GLCK+G D A L ++MEI+G + IT+ ++I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 125 LFENGENDKAEKLLLEMIDK 144
G D KLL +MI +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKR 327
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I++Y LLD LC + ++ ++ D+ Y I++ G+C A ++ DA ++F
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
L +KG + Y +MI+ LC++ +A L KM EG P+ +T+ +IR+ +
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Query: 129 GENDKAEKLLLEMIDKGL 146
+ A +L+ EM G
Sbjct: 592 DDATTAAELIEEMKSSGF 609
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +I T + +++ C+ + G +PD +N L++GLC R
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A E+ ++ G+ T+ T ++NGLC G +A+ L+ +M G PN +T+
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + ++G+ A +LL +M ++ +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNI 259
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + + +N+LL+ LC V + G +P L T N L++GLC G++ DA
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ G+ TY ++N +CK G A+ LL KME +A+ + II
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L ++G D A L EM KG
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGF 294
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
++ +P +I +N L A+ K+ + +G+ + T +I+++ C+ +L
Sbjct: 80 IQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKL 139
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A ++ GY + ++NGLC E EAL L+ +M G P IT ++
Sbjct: 140 SYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTL 199
Query: 122 IRSLFENGENDKAEKLLLEMIDKGL 146
+ L NG+ A L+ M++ G
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGF 224
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 94.7 bits (234), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 2/146 (1%)
Query: 2 HVK--GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAG 59
H+K G +++ Y +L+D L ++ +++ G +PD+ Y +++ G +G
Sbjct: 314 HMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSG 373
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
L A+E+F ++ +KG V TY MI GLC G F EA LL +ME GC PN + +
Sbjct: 374 ELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYS 433
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKG 145
+++ L + G+ +A K++ EM+ KG
Sbjct: 434 TLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 35/171 (20%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
+YN++L++L + G PD+ TYNIL+ + G++ +F ++
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEM 280
Query: 72 LIKG-------YHITVHT----------------------------YTVMINGLCKEGLF 96
G Y+I +H YT +I+GL + G
Sbjct: 281 ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL 340
Query: 97 DEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
+ L +M GC P+ + + +I +GE DKA+++ EM KG L
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL 391
Score = 52.8 bits (125), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M VKGQ N+ TYNS++ LC + +G P+ Y+ L+ L KAG+
Sbjct: 385 MTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGK 444
Query: 61 LKDAQEIFHDLLIKGYHI 78
L +A+++ +++ KG+++
Sbjct: 445 LSEARKVIREMVKKGHYV 462
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 82/147 (55%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
MH KG ++ITY+ ++D+ C+S ++ + PD+ T++ L++ L K G+
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A+EI+ D+L +G T TY MI+G CK+ ++A +L M + C+P+ +TF +
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + D ++ EM +G++
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIV 248
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 71/135 (52%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G ITYNS++D CK ++ + PD+ T++ L++G CKA R+ +
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
EIF ++ +G TYT +I+G C+ G D A LL+ M G PN ITF+S++
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 124 SLFENGENDKAEKLL 138
SL E KA +L
Sbjct: 295 SLCSKKELRKAFAIL 309
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Query: 2 HVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
H+K A+++ YN+++D LCK H D+G+ PD+ TY+ ++D C++GR
Sbjct: 71 HIK---AHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW 127
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
DA+++ D++ + + V T++ +IN L KEG EA + M G P IT+ S+
Sbjct: 128 TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM 187
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
I + + A+++L M K
Sbjct: 188 IDGFCKQDRLNDAKRMLDSMASKS 211
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++T+++L++AL K V +G+ P TYN ++DG CK RL DA+ +
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ K V T++ +ING CK D + + +M G N +T+ ++I +
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ D A+ LL MI G+
Sbjct: 265 GDLDAAQDLLNVMISSGV 282
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
Y ++++ LCK + + ++ + YN ++D LCK G AQ +F ++
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
KG V TY+ MI+ C+ G + +A LL M P+ +TF ++I +L + G+
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 133 KAEKLLLEMIDKGLL 147
+AE++ +M+ +G+
Sbjct: 164 EAEEIYGDMLRRGIF 178
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
+ G +PD+ T+ LM+GLC GR+ A + ++ +G+ Y +INGLCK G +
Sbjct: 3 ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGDTE 58
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
AL LLSKME + + + +II L ++G + A+ L EM DKG+
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIF 108
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +++T+ +L++ LC V ++G QP Y +++GLCK G + A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 65 QEIFHDLLIKGYHITVHT--YTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+ + + HI H Y +I+ LCK+G A L ++M +G P+ IT+ +I
Sbjct: 61 LNLLSKM--EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI 118
Query: 123 RSLFENGENDKAEKLLLEMIDK 144
S +G AE+LL +MI++
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIER 140
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M K +++T+++L++ CK+ VD +G+ + TY L+ G C+ G
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME 107
L AQ++ + ++ G T+ M+ LC + +A A+L ++
Sbjct: 267 LDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 93.2 bits (230), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G ++ITYN+L+ LCK+ ++G++PD TYN L+ G CK G ++
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+ I D + G+ TY +I+GLC EG + ALAL ++ +G PN I + ++I+
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 124 SLFENGENDKAEKLLLEMIDKGLLEKL 150
L G +A +L EM +KGL+ ++
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEV 426
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +I T+N L+ ++ D GV PD+ TYN L++GLCK +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+D E + ++ KG + T+ +++ LC+ DEAL LL +M+ + P+A+TF +
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+I +NG+ D A L +M
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKM 592
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G N+ TYN + LC+ +D +QG +PD+ TYN L+ GLCK + ++
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+ ++ +G +TY +I G CK G+ A ++ G P+ T+ S+I
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
L GE ++A L E + KG+
Sbjct: 365 GLCHEGETNRALALFNEALGKGI 387
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ TYNSLL+ LCK+ + ++G P+L T+NIL++ LC+ +L +A
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME----IEGCTPNAITFES 120
+ ++ K + T+ +I+G CK G D A L KME + TP T+
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP---TYNI 607
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
II + E AEKL EM+D+ L
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCL 633
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + T+N L++ LCK V +G PD+ T+NIL+ G +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A EI +L G V+TY ++NGLCK F++ + M +GC PN TF
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ SL + D+A LL EM +K +
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSV 562
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 68/136 (50%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T+N LL LCK V +GV P+L TYN+ + GLC+ G L A + L
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ +G V TY +I GLCK F EA L KM EG P++ T+ ++I + G
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 132 DKAEKLLLEMIDKGLL 147
AE+++ + + G +
Sbjct: 338 QLAERIVGDAVFNGFV 353
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 65/144 (45%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + TYN+L+ CK V G PD TY L+DGLC G
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +F++ L KG V Y +I GL +G+ EA L ++M +G P TF ++
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
L + G A+ L+ MI KG
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYF 458
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
+ +YN+++ L S + D D+G+ PD+ ++ I M CK R A + +
Sbjct: 111 VFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLN 170
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
++ +G + V Y ++ G +E E L KM G + TF ++R L + G
Sbjct: 171 NMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKG 230
Query: 130 ENDKAEKLLLEMIDKGLLEKL 150
+ + EKLL ++I +G+L L
Sbjct: 231 DVKECEKLLDKVIKRGVLPNL 251
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
TY SL+D LC + +G++P++ YN L+ GL G + +A ++ ++
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ KG V T+ +++NGLCK G +A L+ M +G P+ TF +I +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 131 NDKAEKLLLEMIDKGL 146
+ A ++L M+D G+
Sbjct: 477 MENALEILDVMLDNGV 492
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 36/180 (20%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N+ T+N LL++LC+ +D ++ V PD T+ L+DG CK G L
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 64 AQEIFHDL--------LIKGYHITVH----------------------------TYTVMI 87
A +F + Y+I +H TY +M+
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 88 NGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
+G CK G + L +M G P+ T +I L +A ++ M+ KGL+
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
+P + +YN +M L +G A +++ + +G V+++T+ + CK AL
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 102 LLSKMEIEGCTPNAITFESIIRSLFENGENDKAE--KLLLEMIDKGL 146
LL+ M +GC N + + +++ +E EN KAE +L +M+ G+
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYE--ENFKAEGYELFGKMLASGV 212
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN ++ A + +V D+ + PD TY +++DG CK G + + ++
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAI 116
+ G+ ++ T +IN LC E EA ++ +M +G P A+
Sbjct: 664 MENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIK-GYHITVHTYTVMINGLCKEGLFDE 98
G + L TY +++ L G+ + +E+ D+ G H+ Y + ++G E
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 99 ALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
A+ + +M+ C P ++ +I+ L ++G D+A K+ + M D+G+
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 92.4 bits (228), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 76/146 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +++ Y SL++ LC S + ++PD+ T+N L+D K G+
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
DA+E++++++ + TYT +ING C EG DEA + ME +GC P+ + + S
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + D A K+ EM KGL
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 79.7 bits (195), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 71/138 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T+ SL++ C + ++ + G++PD+ Y ++D LCK G + A
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+F + G V YT ++NGLC G + +A +LL M P+ ITF ++I +
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 125 LFENGENDKAEKLLLEMI 142
+ G+ AE+L EMI
Sbjct: 257 FVKEGKFLDAEELYNEMI 274
Score = 79.3 bits (194), Expect = 8e-16, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQ---GVQPDLCTYNILMDGLCK 57
M +G P NI TYN LL LC + V + GV P++ TYN+L+ GLC
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 58 AGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAIT 117
G+L+ A +F D+ + I + TYT++I G+CK G A+ L + +G PN +T
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 118 FESIIRSLFENGENDKAEKLLLEMIDKGL 146
+ ++I LF G +A L +M + G+
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 77.0 bits (188), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 75/138 (54%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++IT+N+L+DA K + P++ TY L++G C G + +A+++F
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ + KG V YT +ING CK D+A+ + +M +G T N IT+ ++I+ +
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ + A+++ M+ +G+
Sbjct: 366 GKPNVAQEVFSHMVSRGV 383
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +++ Y SL++ CK VD +G+ + TY L+ G + G+
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL---LSKMEIEGCTPNAIT 117
AQE+F ++ +G + TY V+++ LC G +AL + + K E++G PN T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 118 FESIIRSLFENGENDKAEKLLLEM 141
+ ++ L NG+ +KA + +M
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDM 451
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 64/133 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
NI TY SL++ C VD +G PD+ Y L++G CK ++ DA +IF
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ KG TYT +I G + G + A + S M G PN T+ ++ L N
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 129 GENDKAEKLLLEM 141
G+ KA + +M
Sbjct: 401 GKVKKALMIFEDM 413
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
V+ +P +II + LL+ + K D GV DL T N+LM+ C++ +
Sbjct: 64 VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQP 123
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A ++ G+ + T+T +ING C +EA++++++M G P+ + + +I
Sbjct: 124 YLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTI 183
Query: 122 IRSLFENGENDKAEKLLLEMIDKGL 146
I SL +NG + A L +M + G+
Sbjct: 184 IDSLCKNGHVNYALSLFDQMENYGI 208
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 82/147 (55%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G P + ITYNSL+ LC++ VD G P + NIL++GLC++G
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A E +++++G + T+ +INGLC+ G ++ L + K++ EG P+ +TF +
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ L + G A LL E I+ G +
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFV 701
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N+ +Y L+D CK +D G++P+ +N L+ CK R
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A EIF ++ KG V+T+ +I+GLC+ AL LL M EG N +T+ +
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I + GE +A KL+ EM+ +G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQG 559
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N + +N L+ A CK H + +G +PD+ T+N L+ GLC+
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K A + D++ +G TY +IN + G EA L+++M +G + IT+ S
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I+ L GE DKA L +M+ G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDG 594
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G AN +TYN+L++A + + QG D TYN L+ GLC+AG
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A+ +F +L G+ + + ++INGLC+ G+ +EA+ +M + G TP+ +TF S
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L G + + ++ +G+
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGI 665
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXX-XXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
I+ +N+L+ +D G+ PD+CTYN L+ G K G + A E+
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
HD+ KG V++YT++++G CK G DEA +L++M +G PN + F +I + +
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 129 GENDKAEKLLLEMIDKG 145
+A ++ EM KG
Sbjct: 473 HRIPEAVEIFREMPRKG 489
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ TYNSL+ K V ++G +P++ +Y IL+DG CK G++ +A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ +++ G + +I+ CKE EA+ + +M +GC P+ TF S+I
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
L E E A LL +MI +G++
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVV 526
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 77/145 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++ T+NSL+ LC+ + +GV + TYN L++ + G
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K+A+++ ++++ +G + TY +I GLC+ G D+A +L KM +G P+ I+
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I L +G ++A + EM+ +G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRG 629
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P+NI + N L++ LC+S V+ +G PD+ T+N L++GLC+AGR++D
Sbjct: 597 PSNI-SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+F L +G T+ +++ LCK G +A LL + +G PN T+ +++S+
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Query: 127 ENGENDK 133
D+
Sbjct: 716 PQETLDR 722
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 32/178 (17%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G + T+N ++ LCK ++ +G PD TY LM+GLCK GR
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 61 LKDAQEIFHDL------------------------------LIKGYHIT--VHTYTVMIN 88
+ A+++F+ + ++ Y I V TY +I
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 89 GLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
G KEGL AL +L M +GC PN ++ ++ + G+ D+A +L EM GL
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N + Y +L+ +L K + V+ G PD T+N ++ GLCK R
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A ++ + +LI+G+ TY ++NGLCK G D A L ++ P + F +
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNT 358
Query: 121 IIRSLFENGENDKAEKLLLEMI 142
+I +G D A+ +L +M+
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMV 380
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P + T+ ++ A C + +D G P+ Y L+ L K R+ +A +
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+ ++ + G T+ +I GLCK +EA ++++M I G P+ IT+ ++ L
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 127 ENGENDKAEKLLLEM 141
+ G D A+ L +
Sbjct: 334 KIGRVDAAKDLFYRI 348
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
+P +YN++++ L K A +F+D+L + T+ T+ V++ C D AL+
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 102 LLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
LL M GC PN++ ++++I SL + ++A +LL EM G
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M ++G +I+T+NSL++ LC++ ++ +G+ PD T+N LM LCK G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
+ DA + + + G+ T+++++ + + D
Sbjct: 685 VYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
+YN +L+ L + + + P L T+ ++M C + A + D+
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G Y +I+ L K +EAL LL +M + GC P+A TF +I L +
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 132 DKAEKLLLEMIDKGL 146
++A K++ M+ +G
Sbjct: 304 NEAAKMVNRMLIRGF 318
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G NI+TYN+L+ LC+ ++ G+ P+L TYN L+DG C G+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A + DL +G ++ TY ++++G C++G A ++ +ME G P+ +T+
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + + +KA +L L M + GL+
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLV 440
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 77/146 (52%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G AN TY L++ L K+ + GV P+L TYN +M+ LCK GR KDA
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F ++ +G + TY +I GLC+E +EA ++ +M+ +G PN IT+ ++I
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 125 LFENGENDKAEKLLLEMIDKGLLEKL 150
G+ KA L ++ +GL L
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSL 373
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + +TY L+D +S +++ + G+ PD+ TY++L+ G C G+
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A +F ++ K Y MI G CKEG AL LL +ME + PN ++
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L + ++ +AE+L+ +MID G+
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+ TYN +++ LCK ++GV ++ TYN L+ GLC+ +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A ++ + G + + TY +I+G C G +AL+L ++ G +P+ +T+
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ G+ A K++ EM ++G+
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGI 404
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 73/143 (51%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G +++TYN L+ C+ ++G++P TY IL+D ++ ++
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A ++ + G VHTY+V+I+G C +G +EA L M + C PN + + ++I
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ G + +A KLL EM +K L
Sbjct: 487 GYCKEGSSYRALKLLKEMEEKEL 509
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 72/138 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ ++ L+ C++ ++ + G P++ Y L+DG CK G ++ A+++F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G TYTV+INGL K G+ + + KM+ +G PN T+ ++ L ++
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 129 GENDKAEKLLLEMIDKGL 146
G A ++ EM ++G+
Sbjct: 282 GRTKDAFQVFDEMRERGV 299
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N++ Y +L+D CK ++ G+ + TY +L++GL K G K
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E++ + G ++TY ++N LCK+G +A + +M G + N +T+ ++I
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + ++A K++ +M G+
Sbjct: 313 LCREMKLNEANKVVDQMKSDGI 334
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
D+ ++ IL+ G C+AG ++ + ++ +L G+ V YT +I+G CK+G ++A L
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 104 SKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
+M G N T+ +I LF+NG + ++ +M + G+ L
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
Y ++++ +S ++ D G P +N L+ + + F++
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
K + V+++ ++I G C+ G +++ LL ++ G +PN + + ++I + GE +
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 133 KAEKLLLEMIDKGLL 147
KA+ L EM GL+
Sbjct: 216 KAKDLFFEMGKLGLV 230
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 91.3 bits (225), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 80/148 (54%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +N +TYN+L+ ++ VD G+ PD+ TYNIL+ GLC G
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ A IF D+ + + + TYT +I G+CK G +EA +L + ++G P+ +T+ +
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLE 148
++ L G + E L +M +GL++
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Score = 89.7 bits (221), Expect = 7e-19, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + +T SL++ C+ + V + G +PD+ YN ++D LCK R+ DA
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ F ++ KG V TYT ++NGLC + +A LLS M + TPN IT+ +++ +
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 125 LFENGENDKAEKLLLEMI 142
+NG+ +A++L EM+
Sbjct: 270 FVKNGKVLEAKELFEEMV 287
Score = 87.0 bits (214), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 73/133 (54%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ITY++LLDA K+ V + PD+ TY+ L++GLC R+ +A ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG V +Y +ING CK ++ + L +M G N +T+ ++I+ F+
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 129 GENDKAEKLLLEM 141
G+ DKA++ +M
Sbjct: 379 GDVDKAQEFFSQM 391
Score = 81.6 bits (200), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 75/143 (52%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+ YN+++D+LCK+ V+ +G++P++ TY L++GLC + R DA
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ D++ K V TY+ +++ K G EA L +M P+ +T+ S+I
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
L + D+A ++ M+ KG L
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCL 327
Score = 80.1 bits (196), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 72/133 (54%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I+TY+SL++ LC +D +G D+ +YN L++G CKA R++D ++F
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TY +I G + G D+A S+M+ G +P+ T+ ++ L +N
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 129 GENDKAEKLLLEM 141
GE +KA + +M
Sbjct: 414 GELEKALVIFEDM 426
Score = 79.3 bits (194), Expect = 8e-16, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 76/146 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG A++++YN+L++ CK+ V+ +G+ + TYN L+ G +AG
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ AQE F + G + TY +++ GLC G ++AL + M+ + +T+ +
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+IR + + G+ ++A L + KGL
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGL 466
Score = 77.4 bits (189), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 73/144 (50%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N++TY +L++ LC S + + P++ TY+ L+D K G++ +
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+E+F +++ + TY+ +INGLC DEA + M +GC + +++ ++I
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
+ + KL EM +GL+
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLV 362
Score = 73.6 bits (179), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 62/118 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +I TYN LL LC + ++ + + D+ TY ++ G+CK G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF 118
+++A +F L +KG + TYT M++GLC +GL E AL +KM+ EG N T
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V G ++ T+N +++ C V G +PD T L++G C+ R
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA + ++ GY + Y +I+ LCK ++A ++E +G PN +T+ +
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
++ L + A +LL +MI K
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKK 254
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 90.9 bits (224), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 77/146 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V G +++ +YN+++D LCK+ ++ D+G+ P+L T+N + G G
Sbjct: 416 MGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGD 475
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K + LL+ G+ V T++++IN LC+ +A +M G PN IT+
Sbjct: 476 VKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNI 535
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+IRS G+ D++ KL +M + GL
Sbjct: 536 LIRSCCSTGDTDRSVKLFAKMKENGL 561
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 68/132 (51%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN+++DAL KS+ +D G +PD TYNIL+ G+CK G + +A + +
Sbjct: 183 YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQME 242
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
+G V TYT++I+G G DEAL L M + PN T + + +F
Sbjct: 243 QEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPC 302
Query: 133 KAEKLLLEMIDK 144
KA ++L+ ++K
Sbjct: 303 KAFEVLVGFMEK 314
Score = 66.6 bits (161), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N ITYN L+ + C + D + G+ PDL YN + CK ++K A
Sbjct: 525 GIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKA 584
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAIT 117
+E+ +L G TY+ +I L + G EA + S +E GC P++ T
Sbjct: 585 EELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G++P YN ++D L K+ L A F + G TY ++I+G+CK+G+ DEA
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
+ L+ +ME EG PN T+ +I G D+A K L M
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMM 276
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 65/136 (47%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
V G ++IT++ +++ LC++ + + G++P+ TYNIL+ C G
Sbjct: 488 VHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTD 547
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+ ++F + G ++ Y I CK +A LL M G P+ T+ ++I
Sbjct: 548 RSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLI 607
Query: 123 RSLFENGENDKAEKLL 138
++L E+G +A ++
Sbjct: 608 KALSESGRESEAREMF 623
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 61/135 (45%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T+N+ + L K H + +GV+P Y +L+ L A R + +
Sbjct: 357 TFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM 416
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ G +V++Y +I+ LCK + A L++M+ G +PN +TF + + G+
Sbjct: 417 GVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDV 476
Query: 132 DKAEKLLLEMIDKGL 146
K +L +++ G
Sbjct: 477 KKVHGVLEKLLVHGF 491
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+ Y+++L L + ++G PD T+N M L K L + IF
Sbjct: 321 VGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDG 380
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ +G + Y V++ L F E L +M ++G + ++ ++I L +
Sbjct: 381 FVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARR 440
Query: 131 NDKAEKLLLEMIDKGLLEKL 150
+ A L EM D+G+ L
Sbjct: 441 IENAAMFLTEMQDRGISPNL 460
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + TY L+ ALC +D +G +P++ TY +L+DGLC+ G+
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A + ++ +V TY +ING CK+G A LL+ ME C PN TF
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ L G+ KA LL M+D GL
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGL 437
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ITYN+L++ CK V + +P++ T+N LM+GLC+ G+ A +
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+L G + +Y V+I+GLC+EG + A LLS M P+ +TF +II + +
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ D A L M+ KG+
Sbjct: 490 GKADVASAFLGLMLRKGI 507
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
+ N +LD L K V G+ P + TY L+DGL ++G + + I +
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ G V+ YT++INGLC+ G +EA LLS M+ G +PN +T+ +++ NG+
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 132 DKAEKLLLEMIDKG 145
D+A + + M+++G
Sbjct: 668 DRALETVRAMVERG 681
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 14 NSLLDALCKSHHV-DXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
SLL C+ ++ D + P+ +Y+IL+ GLC+ GRL++A + +
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
KG + TYTV+I LC GL D+A L +M GC PN T+ +I L +G+ +
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 133 KAEKLLLEMI 142
+A + +M+
Sbjct: 354 EANGVCRKMV 363
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +I Y ++++ALCK+ + + G D L+ G C+
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 61 LKDAQEIFHDLLIKGYHITVHT--YTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF 118
L+DA ++F D++ K ++ Y+++I+GLC+ G +EA L +M +GC P+ T+
Sbjct: 246 LRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDKG 145
+I++L + G DKA L EMI +G
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRG 331
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 35/171 (20%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH- 69
+T+ ++++A CK D +G+ D T L+DG+CK G+ +DA I
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 70 -----------------DLLIKGYHI-----------------TVHTYTVMINGLCKEGL 95
D+L KG + +V TYT +++GL + G
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 96 FDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+ +L M++ GC PN + II L + G ++AEKLL M D G+
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + N+ T+N L++ LC+ D G+ PD+ +YN+L+DGLC+ G
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A ++ + T+T +IN CK+G D A A L M +G + + +T +
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + + G+ A +L ++ +L
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRIL 543
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +++TY +L+D L +S + G P++ Y I+++GLC+ GR+++A
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+++ + G TYTVM+ G G D AL + M G N + S+++
Sbjct: 636 EKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Query: 125 L 125
Sbjct: 696 F 696
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I++YN L+D LC+ H++ ++PD T+ +++ CK G+ A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLS---KMEIEGCTPNAITFESI 121
+L KG + T T +I+G+CK G +AL +L KM I TP+++ ++
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT-TPHSL---NV 551
Query: 122 IRSLFENGENDKAEKLLLEMIDK 144
I + G K E +L I+K
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINK 574
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 23/170 (13%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G N+ Y +++ LC+ V+ D GV P+ TY +++ G G+
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMING--LCKEGLFDEALALLSKM------------ 106
L A E ++ +GY + Y+ ++ G L ++G+ + + +S +
Sbjct: 667 LDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINE 726
Query: 107 ------EIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL-LEK 149
++ GC F ++ L + G D++ L+ ++++G+ LEK
Sbjct: 727 LISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEK 774
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N +TY +L+ ++ D GV P++ TYN L+DGLCK G+
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ A +F L T++TY +MI G+CK G ++ L + ++G P+ I + +
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I G ++A+ L +M + G L
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPL 572
Score = 90.1 bits (222), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G NI+TYN+LLD LCK+ ++ ++P + TYNI+++G+CKAG+++D
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAIT 117
++F L +KG V Y MI+G C++GL +EA AL KM +G P++ T
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 75/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N+ITY+SL+ LC ++ + P++ T+N L+D K G+
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A++++ +++ + + TY+ +ING C DEA + M + C PN +T+ +
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + D+ +L EM +GL+
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLV 432
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T+N+L+DA K + + + PD+ TY+ L++G C RL +A+ +F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K V TY +ING CK DE + L +M G N +T+ ++I F+
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 129 GENDKAEKLLLEMIDKGL 146
+ D A+ + +M+ G+
Sbjct: 449 RDCDNAQMVFKQMVSDGV 466
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
AN++ Y++++D+LCK H D ++GV+P++ TY+ L+ LC R DA +
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
D++ + + V T+ +I+ KEG EA L +M P+ T+ S+I
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 128 NGENDKAEKLLLEMIDK 144
+ D+A+ + MI K
Sbjct: 378 HDRLDEAKHMFELMISK 394
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+ TYN L++ C+ + G +P + T + L++G C R
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA + ++ GY T+T +I+GL EA+AL+ +M GC PN +T+
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 121 IIRSLFENGENDKAEKLLLEM 141
++ L + G+ D A LL +M
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKM 251
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T +SLL+ C + + G +PD T+ L+ GL + +A
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ +G + TY V++NGLCK G D A LL+KME N + + ++I S
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + D A L EM +KG+
Sbjct: 270 LCKYRHEDDALNLFTEMENKGV 291
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N++TY +++ LCK +D ++ ++ Y+ ++D LCK
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
DA +F ++ KG V TY+ +I+ LC + +A LLS M PN +TF +
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + G+ +AEKL EMI + +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSI 361
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + IT+ +L+ L + +G QP+L TY ++++GLCK G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + + V Y+ +I+ LCK D+AL L ++ME +G PN IT+ S+I
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 125 LFENGENDKAEKLLLEMIDK 144
L A +LL +MI++
Sbjct: 305 LCNYERWSDASRLLSDMIER 324
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I TY+SL++ C +D + P++ TYN L++G CKA R+ + E+F
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TYT +I+G + D A + +M +G PN +T+ +++ L +N
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 129 GENDKAEKLLLEMIDKGLLE 148
G+ +KA ++ E + + +E
Sbjct: 484 GKLEKA-MVVFEYLQRSKME 502
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++TYN+L++ CK+ +D +G+ + TY L+ G +A +AQ +F
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G H + TY +++GLCK G ++A+ + ++ P T+ +I + +
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ + L + KG+
Sbjct: 519 GKVEDGWDLFCSLSLKGV 536
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
VK +P +I +N LL A+ K D G+ +L TYNIL++ C+ ++
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A + ++ GY ++ T + ++NG C +A+AL+ +M G P+ ITF ++
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
I LF + + +A L+ M+ +G
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRG 220
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 90.5 bits (223), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 77/138 (55%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++TY++ +D CKS + + P++ T+ L+DG CKAG L+ A ++
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ + V TYT +I+G CK+G A + S+M + PN++ + +II F+
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 129 GENDKAEKLLLEMIDKGL 146
G++D A K L +M+++G+
Sbjct: 282 GDSDNAMKFLAKMLNQGM 299
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 72/142 (50%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
+ AN + Y L+DALCK + G+ PD Y + GLCK G L DA
Sbjct: 399 EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
++ ++ +G + + YT +I GL +GL EA + +M G +P++ F+ +IR+
Sbjct: 459 KLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
Query: 126 FENGENDKAEKLLLEMIDKGLL 147
+ G A LLL+M +GL+
Sbjct: 519 EKEGNMAAASDLLLDMQRRGLV 540
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++TY +L+D CK + + V+P+ Y ++DG + G +A +
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+L +G + + Y V+I+GLC G EA ++ ME P+ + F +++ + F++
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 129 GENDKAEKLLLEMIDKGL 146
G A + ++I++G
Sbjct: 352 GRMKAAVNMYHKLIERGF 369
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I+++NSL + K +D + P++ TY+ +D CK+G L+ A + F
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSF 186
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
H + V T+T +I+G CK G + A++L +M + N +T+ ++I +
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 129 GENDKAEKLLLEMID 143
GE +AE++ M++
Sbjct: 247 GEMQRAEEMYSRMVE 261
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 30/177 (16%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G +I Y ++ LC + + + PD+ + +M+ K+GR+K
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 64 AQEIFHDLLIKGYHITVHT------------------------------YTVMINGLCKE 93
A ++H L+ +G+ V YTV+I+ LCKE
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKE 416
Query: 94 GLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
G F E L SK+ G P+ + S I L + G A KL M+ +GLL L
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDL 473
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
++NS++ +CK V G +PD+ +YN L+DG C+ G ++ A + L
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 72 LIKGYHIT---VHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
I + ++ + NG K + DE + M ++ C+PN +T+ + I + ++
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKS 176
Query: 129 GE 130
GE
Sbjct: 177 GE 178
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 82/142 (57%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
Q +++T ++L++ LC V + G QPD TY +++ LCK+G A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
++F + + +V Y+++I+ LCK+G FD+AL+L ++ME++G + +T+ S+I L
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 126 FENGENDKAEKLLLEMIDKGLL 147
+G+ D K+L EMI + ++
Sbjct: 291 CNDGKWDDGAKMLREMIGRNII 312
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + ITYNSL+D CK + + +G +PD+ TY+IL++ CKA R
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ D +F ++ KG TY ++ G C+ G + A L +M G P+ +T+
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 121 IIRSLFENGENDKAEKLLLEM 141
++ L +NGE +KA ++ +M
Sbjct: 461 LLDGLCDNGELNKALEIFEKM 481
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 67/124 (54%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G P +++TY LLD LC + ++ + + YNI++ G+C A +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA +F L KG V TY VMI GLCK+G EA L KM+ +GCTP+ T+
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 121 IIRS 124
+IR+
Sbjct: 566 LIRA 569
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG A+++TY+SL+ LC D + + PD+ T++ L+D K G+
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A+E++++++ +G TY +I+G CKE EA + M +GC P+ +T+
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I S + D +L E+ KGL+
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLI 417
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 79/146 (54%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +I+TY+ L+++ CK+ VD +G+ P+ TYN L+ G C++G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A+E+F +++ +G +V TY ++++GLC G ++AL + KM+ T +
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
II + + D A L + DKG+
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGV 521
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 77/138 (55%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++T+++L+D K + +G+ PD TYN L+DG CK L +A ++F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG + TY+++IN CK D+ + L ++ +G PN IT+ +++ ++
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ + A++L EM+ +G+
Sbjct: 434 GKLNAAKELFQEMVSRGV 451
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP + TY +L+ LCKS + ++ ++ + Y+I++D LCK G DA
Sbjct: 207 QPDEV-TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+F+++ +KG V TY+ +I GLC +G +D+ +L +M P+ +TF ++I
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 126 FENGENDKAEKLLLEMIDKGL 146
+ G+ +A++L EMI +G+
Sbjct: 326 VKEGKLLEAKELYNEMITRGI 346
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN ++ +C + VD D+GV+PD+ TYN+++ GLCK G L +A +F +
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 73 IKGYHITVHTYTVMING-LCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G TY ++I L GL ++ L+ +M++ G + ++ T + +I L +
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSADSSTIKMVIDML----SD 607
Query: 132 DKAEKLLLEMI 142
+ +K L+M+
Sbjct: 608 RRLDKSFLDML 618
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
I +N L A+ ++ D G++ D+ T I+++ C+ +L A +
Sbjct: 71 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 130
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
GY T++ ++NG C EG EA+AL+ +M P+ +T ++I L G
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 131 NDKAEKLLLEMIDKGL 146
+A L+ M++ G
Sbjct: 191 VSEALVLIDRMVEYGF 206
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
MH KG N++TYN ++D+ C S ++ + PD+ T++ L++ K +
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK 95
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A+EI+ ++L T TY MI+G CK+ D+A +L M +GC+P+ +TF +
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + D ++ EM +G++
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIV 182
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 68/128 (53%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
ITYNS++D CK VD +G PD+ T++ L++G CKA R+ + EIF +
Sbjct: 116 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 175
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ +G TYT +I+G C+ G D A LL++M G P+ ITF ++ L E
Sbjct: 176 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 235
Query: 131 NDKAEKLL 138
KA +L
Sbjct: 236 LRKAFAIL 243
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I+T+++L++A K V + P TYN ++DG CK R+ DA+ +
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ KG V T++ +ING CK D + + +M G N +T+ ++I +
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ D A+ LL EMI G+
Sbjct: 199 GDLDAAQDLLNEMISCGV 216
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +++T+++L++ CK+ VD +G+ + TY L+ G C+ G
Sbjct: 141 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 200
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME 107
L AQ++ ++++ G T+ M+ GLC + +A A+L ++
Sbjct: 201 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
++ D+ ++D LCK G +AQ +F ++ KG V TY MI+ C G + +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
LL M + P+ +TF ++I + + + +AE++ EM+ +
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIF 112
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N TY+ LL+A K D +G +P+L +YN+L+ G CK GR D
Sbjct: 205 KGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDD 264
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +F +L KG+ V +Y +++ LC +G ++EA +LL++M+ P+ +T+ +I
Sbjct: 265 AMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILIN 324
Query: 124 SLFENGENDKAEKLLLEM 141
SL +G ++A ++L EM
Sbjct: 325 SLAFHGRTEQALQVLKEM 342
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+ LL LCK++ + G+ PD Y L++ LCK G + A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ + GY TY ++ GLC G +++L + ++ +G PNA T+ ++ +
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 125 LFENGENDKAEKLLLEMIDKG 145
++ D+A KLL E+I KG
Sbjct: 221 AYKERGTDEAVKLLDEIIVKG 241
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
Y L++ LCK +V D G + TYN L+ GLC G L + + L
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ KG TY+ ++ KE DEA+ LL ++ ++G PN +++ ++ + G
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 132 DKAEKLLLEMIDKGL 146
D A L E+ KG
Sbjct: 263 DDAMALFRELPAKGF 277
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+ KG AN+++YN LL LC + P + TYNIL++ L GR
Sbjct: 272 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGR 331
Query: 61 LKDAQEIFHDLLIKGYH---ITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAIT 117
+ A ++ ++ KG H +T +Y +I LCKEG D + L +M C PN T
Sbjct: 332 TEQALQVLKEM-SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGT 390
Query: 118 FESI 121
+ +I
Sbjct: 391 YNAI 394
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G +P++ L+ LCKA RLK A + ++ G YT ++N LCK G A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+ L+ KME G N +T+ +++R L G +++ + + ++ KGL
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL 207
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 48 YNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM- 106
Y ++ LC+ G A ++ +++ G+ HTY+ +I GLC EG+F A+ +LS M
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 107 EIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
E E C P F ++I L + D A ++ M++K
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEK 523
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 89.7 bits (221), Expect = 7e-19, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 81/147 (55%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +++TY+ L++ CKS V+ +GV + TY IL+ G C+AG+
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A+EIF ++ G H + TY V+++GLC G ++AL +L+ M+ G + +T+
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
IIR + + GE A + + +GL+
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLM 463
Score = 84.0 bits (206), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 73/144 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G P N+ T N LL+ C+ + G +P + T+ L++G C+ R
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA +F ++ GY V Y +I+GLCK D AL LL++ME +G P+ +T+ S
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
+I L +G A +++ M +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKR 250
Score = 82.8 bits (203), Expect = 7e-17, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 69/141 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N++ YN+++D LCKS VD G+ PD+ TYN L+ GLC +GR DA
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + + + V T+ +I+ KEG EA +M P+ +T+ +I
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 125 LFENGENDKAEKLLLEMIDKG 145
L D+AE++ M+ KG
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKG 321
Score = 82.8 bits (203), Expect = 8e-17, Method: Composition-based stats.
Identities = 45/110 (40%), Positives = 62/110 (56%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G NIITYN LL LC + ++ G+ D+ TYNI++ G+CKAG + DA
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPN 114
+I+ L +G + TYT M+ GL K+GL EA AL KM+ +G PN
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 81.3 bits (199), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 75/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +++TYNSL+ LC S + + PD+ T+N L+D K GR
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A+E + +++ + + TY+++I GLC DEA + M +GC P+ +T+
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I ++ + + KL EM +G++
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVV 358
Score = 80.1 bits (196), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 75/138 (54%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I+TY+ L+ LC +D +G PD+ TY+IL++G CK+ +++ ++F
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TYT++I G C+ G + A + +M G PN IT+ ++ L +N
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ +KA +L +M G+
Sbjct: 410 GKIEKALVILADMQKNGM 427
Score = 79.3 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 75/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N +TY L+ C++ ++ GV P++ TYN+L+ GLC G+
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A I D+ G + TY ++I G+CK G +A + + +G P+ T+ +
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ L++ G +A+ L +M + G+L
Sbjct: 472 MMLGLYKKGLRREADALFRKMKEDGIL 498
Score = 78.6 bits (192), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 71/134 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ T+N+L+DA K V + + PD+ TY++L+ GLC RL +A+E+F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG V TY+++ING CK + + L +M G N +T+ +I+
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 129 GENDKAEKLLLEMI 142
G+ + AE++ M+
Sbjct: 375 GKLNVAEEIFRRMV 388
Score = 77.8 bits (190), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 73/142 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T+ SLL+ C+ V G +P++ YN ++DGLCK+ ++ +A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ + + G V TY +I+GLC G + +A ++S M P+ TF ++I +
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ G +AE+ EMI + L
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSL 287
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I++Y LLD LC + + ++ D+ YNI++ G+C A ++ DA ++F
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
L +KG V TY +MI GLCK+G EA L KME +G +PN T+ +IR+
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 129 GENDKAEKLLLEM 141
G+ K+ KL+ E+
Sbjct: 576 GDATKSAKLIEEI 588
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP N +TY +L +CKS ++ ++ D Y+I++DGLCK G L +A
Sbjct: 209 QP-NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+F+++ IKG+ + YT +I G C G +D+ LL M TP+ + F ++I
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 126 FENGENDKAEKLLLEMIDKGL 146
+ G+ +AE+L EMI +G+
Sbjct: 328 VKEGKLREAEELHKEMIQRGI 348
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + +TY SL+D CK + +D +G P++ T+NIL++G CKA
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ D E+F + ++G TY +I G C+ G + A L +M P+ ++++
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLE 148
++ L +NGE +KA + + E I+K +E
Sbjct: 463 LLDGLCDNGEPEKALE-IFEKIEKSKME 489
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 71/136 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++ +++L+D K + +G+ PD TY L+DG CK +L A +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG + T+ ++ING CK L D+ L L KM + G + +T+ ++I+ E
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 129 GENDKAEKLLLEMIDK 144
G+ + A++L EM+ +
Sbjct: 436 GKLEVAKELFQEMVSR 451
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +IT N+L++ LC + V + G QP+ TY ++ +CK+G+ A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ + + + Y+++I+GLCK+G D A L ++MEI+G + I + ++IR
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 125 LFENGENDKAEKLLLEMIDK 144
G D KLL +MI +
Sbjct: 292 FCYAGRWDDGAKLLRDMIKR 311
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG A+II Y +L+ C + D + + PD+ ++ L+D K G+
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L++A+E+ +++ +G TYT +I+G CKE D+A +L M +GC PN TF
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + D +L +M +G++
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVV 419
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 75/141 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG N+ T + +++ C+ + G +PD T++ L++GLC GR
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A E+ ++ G+ T+ T ++NGLC G +A+ L+ +M G PN +T+
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+++ + ++G+ A +LL +M
Sbjct: 218 VLKVMCKSGQTALAMELLRKM 238
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+ Y+ ++D LCK +D +G + D+ Y L+ G C AGR D ++ D
Sbjct: 248 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
++ + V ++ +I+ KEG EA L +M G +P+ +T+ S+I + +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 131 NDKAEKLLLEMIDKG 145
DKA +L M+ KG
Sbjct: 368 LDKANHMLDLMVSKG 382
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG NI T+N L++ CK++ +D +GV D TYN L+ G C+ G+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ A+E+F +++ + + +Y ++++GLC G ++AL + K+E + +
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
II + + D A L + KG+
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGV 523
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
+ +P +I ++ L + ++ D +G+ +L T +I+++ C+ +L
Sbjct: 64 TRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKL 123
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A ++ GY T++ +INGLC EG EAL L+ +M G P IT ++
Sbjct: 124 SLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNAL 183
Query: 122 IRSLFENGENDKAEKLLLEMIDKGL 146
+ L NG+ A L+ M++ G
Sbjct: 184 VNGLCLNGKVSDAVLLIDRMVETGF 208
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I YN ++ +C + VD +GV+PD+ TYNI++ GLCK G L +A +F
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ G+ TY ++I EG ++ L+ +++ G + +A T + ++ L
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML--- 607
Query: 129 GENDKAEKLLLEMI 142
+ + +K L+M+
Sbjct: 608 -SDGRLKKSFLDML 620
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 89.0 bits (219), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +I TYN+L+ CK GV P++ TYN + G + GR
Sbjct: 229 MEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGR 288
Query: 61 LKDAQEIFHDLL--IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF 118
+++A +F ++ + H+ TYT +I+G C+ DEAL L ME G +P +T+
Sbjct: 289 MREATRLFREIKDDVTANHV---TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTY 345
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDK 144
SI+R L E+G +A +LL EM K
Sbjct: 346 NSILRKLCEDGRIREANRLLTEMSGK 371
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 68/146 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++TYNS+L LC+ + + ++PD T N L++ CK
Sbjct: 333 MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIED 392
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A ++ ++ G + +++Y +I+G CK + A L M +G +P T+
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + + D+ KLL E +GL
Sbjct: 453 LVDGFYNQNKQDEITKLLEEFEKRGL 478
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
K +P NI T N+L++A CK + + G++ D+ +Y L+ G CK L++
Sbjct: 372 KIEPDNI-TCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELEN 430
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+E ++ KG+ TY+ +++G + DE LL + E G + + +IR
Sbjct: 431 AKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIR 490
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
+ + + D A+ L M KGL+
Sbjct: 491 RICKLEQVDYAKVLFESMEKKGLV 514
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 16 LLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKG 75
LL++L K D GV ++ YN+L+ K+G + A+++ ++ KG
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 76 YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAE 135
+ TY +I+ CK+ + EAL++ +ME G PN +T+ S I G +A
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 136 KLLLEMID 143
+L E+ D
Sbjct: 294 RLFREIKD 301
Score = 62.8 bits (151), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 67/139 (48%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
AN +TY +L+D C+ + +D +G P + TYN ++ LC+ GR+++A +
Sbjct: 305 ANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRL 364
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
++ K T +IN CK A+ + KM G + +++++I +
Sbjct: 365 LTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCK 424
Query: 128 NGENDKAEKLLLEMIDKGL 146
E + A++ L MI+KG
Sbjct: 425 VLELENAKEELFSMIEKGF 443
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G NI+TYNS + + + D V + TY L+DG C+
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMND 322
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A + + +G+ V TY ++ LC++G EA LL++M + P+ IT +
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + + A K+ +MI+ GL
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGL 408
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 63/146 (43%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ +Y +L+ CK ++ ++G P TY+ L+DG + +
Sbjct: 407 GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEI 466
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ + +G V Y +I +CK D A L ME +G +++ F ++ +
Sbjct: 467 TKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYA 526
Query: 125 LFENGENDKAEKLLLEMIDKGLLEKL 150
+ G+ +A L M ++ L+ L
Sbjct: 527 YWRTGKVTEASALFDVMYNRRLMVNL 552
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 48 YNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME 107
++ LM KAG + D+ +F + G + TV++N L K+ L D + KM
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 108 IEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
G N + ++ + ++G+ +KAEKLL EM +KG+
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVF 235
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 78/146 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +++YN L+ LCK+ + G +PDL TY+IL+ GLC+ +
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A E++H L G V + ++I+GLC G D+A+ +++ ME CT N +T+ +
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ F+ G++++A + M GL
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGL 635
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ T+N ++ L K VD + DL TY+ L+ GLC AG + A+ +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++L + I V TY M+ G C+ G E+L L ME + + N +++ +I+ L EN
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLEN 372
Query: 129 GENDKAEKLLLEMIDKG 145
G+ D+A + M KG
Sbjct: 373 GKIDEATMIWRLMPAKG 389
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++ +Y+++++ L K+ +D ++GV PD+ YNIL+DG K
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 61 LKDAQEIFHDLL-IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
K A E++ LL + V T+ +MI+GL K G D+ L + +M+ + T+
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 120 SIIRSLFENGENDKAEKLLLEMIDK 144
S+I L + G DKAE + E+ ++
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDER 319
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG A+ TY + LC + +V+ G D+ Y ++D LCK R
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L++A + ++ G + H +I GL ++ EA L +M GC P +++
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L + G+ +A + EM++ G
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGW 530
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++TYN++L C+ + + ++ +YNIL+ GL + G++ +A I+
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ KGY TY + I+GLC G ++AL ++ ++E G + + SII L +
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 129 GENDKAEKLLLEMIDKGL 146
++A L+ EM G+
Sbjct: 443 KRLEEASNLVKEMSKHGV 460
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ Y S++D LCK ++ GV+ + N L+ GL + RL +A
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ G TV +Y ++I GLCK G F EA A + +M G P+ T+ ++
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + + D A +L + + GL
Sbjct: 544 LCRDRKIDLALELWHQFLQSGL 565
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
NI++YN L+ L ++ +D +G D TY I + GLC G + A
Sbjct: 355 NSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+ ++ G H+ V+ Y +I+ LCK+ +EA L+ +M G N+ ++I L
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
Query: 126 FENGENDKAEKLLLEMIDKG 145
+ +A L EM G
Sbjct: 475 IRDSRLGEASFFLREMGKNG 494
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ TY+ LL LC+ +D G++ D+ +NIL+ GLC G+L DA
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ + + TY ++ G K G + A + M G P+ I++ +I++
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648
Query: 125 L 125
L
Sbjct: 649 L 649
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G +P + +YN L++ +A + + +F G + TY V+I CK+ F++A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
L M EG P+ ++ ++I L + G+ D A +L EM ++G+
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSH-HVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAG 59
M +G ++ YN L+D K H D V P++ T+NI++ GL K G
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
R+ D +I+ + ++TY+ +I+GLC G D+A ++ ++++ + + +T+
Sbjct: 270 RVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329
Query: 120 SII 122
+++
Sbjct: 330 TML 332
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
AN++TYN+L++ K + G+QPD+ +YN +M GLC + A E
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Query: 68 FHDLLIKGYHITVHTYTVMINGL 90
F D G TV+T+ +++ +
Sbjct: 662 FDDARNHGIFPTVYTWNILVRAV 684
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +I + +L+D L ++ ++ G PD+ Y +++ G G
Sbjct: 318 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ A+E+F ++ KG V TY MI G C G F EA ALL +ME GC PN + + +
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
++ +L G+ +A +++ +M++KG
Sbjct: 438 LVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 66/171 (38%), Gaps = 35/171 (20%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
+YN++L +L + G PD+ TYNI+M + G+ + ++
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM 283
Query: 72 LIKGYHITVHTY-----------------------------------TVMINGLCKEGLF 96
+ G+ ++TY T +I+GL + G
Sbjct: 284 VKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 97 DEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
+ + + GCTP+ + + +I GE +KAE++ EM +KG L
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KGQ N+ TYNS++ C + +G P+ Y+ L++ L AG+
Sbjct: 388 MTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGK 447
Query: 61 LKDAQEIFHDLLIKGYHI 78
+ +A E+ D++ KG+++
Sbjct: 448 VLEAHEVVKDMVEKGHYV 465
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 36/175 (20%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
GQP ++ YN+L++ CK + +D + PD TYNI++ LC G+L A
Sbjct: 154 GQP-DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 65 QEIFHDLLIKGYHITVHTYTVMI-----------------------------------NG 89
++ + LL TV TYT++I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 90 LCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
+CKEG+ D A ++ +E++GC P+ I++ ++R+L G+ ++ EKL+ +M +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP +ITY L++A VD +G++PD+ TYN ++ G+CK G + A
Sbjct: 225 QPT-VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
E+ +L +KG V +Y +++ L +G ++E L++KM E C PN +T+ +I +L
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 126 FENGENDKAEKLLLEMIDKGL 146
+G+ ++A LL M +KGL
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGL 364
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++ TYN+++ +CK VD +G +PD+ +YNIL+ L G+
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ +++ + + V TY+++I LC++G +EA+ LL M+ +G TP+A +++
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + G D A + L MI G L
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCL 400
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 75/138 (54%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++TY+ L+ LC+ ++ ++G+ PD +Y+ L+ C+ GRL A E
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G + Y ++ LCK G D+AL + K+ GC+PN+ ++ ++ +L+ +
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ +A ++LEM+ G+
Sbjct: 452 GDKIRALHMILEMMSNGI 469
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
QPD+ YN L++G CK R+ DA + + K + TY +MI LC G D AL
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 102 LLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+L+++ + C P IT+ +I + G D+A KL+ EM+ +GL
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 71/134 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+ +KG ++I+YN LL AL + + P++ TY+IL+ LC+ G+
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A + + KG ++Y +I C+EG D A+ L M +GC P+ + + +
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 121 IIRSLFENGENDKA 134
++ +L +NG+ D+A
Sbjct: 409 VLATLCKNGKADQA 422
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 65/141 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + +Y+ L+ A C+ +D G PD+ YN ++ LCK G+
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A EIF L G +Y M + L G AL ++ +M G P+ IT+ S
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+I L G D+A +LL++M
Sbjct: 479 MISCLCREGMVDEAFELLVDM 499
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N +YN++ AL S G+ PD TYN ++ LC+ G + +A
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ D+ +H +V TY +++ G CK ++A+ +L M GC PN T+ +I
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Query: 125 LFENGENDKAEKLLLEMI 142
+ G +A +L +++
Sbjct: 553 IGFAGYRAEAMELANDLV 570
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I+ YN++L LCK+ D + G P+ +YN + L +G A +
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ G TY MI+ LC+EG+ DEA LL M P+ +T+ ++ +
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Query: 129 GENDKAEKLLLEMIDKG 145
+ A +L M+ G
Sbjct: 522 HRIEDAINVLESMVGNG 538
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 88.2 bits (217), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N+ Y L+D KS V+ D+G +PD+ TY+++++GLCK GR+++
Sbjct: 356 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + FH G I Y+ +I+GL K G DEA L +M +GCT ++ + ++I
Sbjct: 416 ALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 124 SLFENGENDKAEKLLLEM 141
+ ++ + D+A L M
Sbjct: 476 AFTKHRKVDEAIALFKRM 493
Score = 86.7 bits (213), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 75/133 (56%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
++ ++ LCK ++ +G +P++ Y +L+DG K+G ++DA + H ++
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
+G+ V TY+V++NGLCK G +EAL +G N++ + S+I L + G D
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 133 KAEKLLLEMIDKG 145
+AE+L EM +KG
Sbjct: 450 EAERLFEEMSEKG 462
Score = 73.9 bits (180), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 35/181 (19%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + TYN L++ L + VD ++PD+ TYN ++ G CKAG+
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 61 LKDAQEIFHDLLIKGY-----------------------------------HITVHTYTV 85
+ A E D+ +G+ + H +++
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 86 MINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
+I GLCKEG +E + M +G PN + +I ++G + A +LL MID+G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 146 L 146
Sbjct: 393 F 393
Score = 67.0 bits (162), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N + Y+SL+D L K+ VD ++G D YN L+D K ++ +A
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Query: 65 QEIFHDLLIK-GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+F + + G TV+TYT++++G+ KE +EAL L M +G TP A F ++
Sbjct: 487 IALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALST 546
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
L +G+ +A K+L E+ G++
Sbjct: 547 GLCLSGKVARACKILDELAPMGVI 570
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 66/140 (47%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P + N+L+ + K V+ + G++P L TYN LM+GL A + A+
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+F + + TY MI G CK G +A+ L ME G + IT+ ++I++ +
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 127 ENGENDKAEKLLLEMIDKGL 146
+ + L EM +KG+
Sbjct: 304 ADSDFGSCVALYQEMDEKGI 323
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXX-XXXXXDQGVQPDLCTYNILMDGLCKAG 59
M KG + YN+L+DA K VD ++G + TY IL+ G+ K
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 517
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
R ++A +++ ++ KG T + + GLC G A +L ++ G +A E
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-E 576
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKG 145
+I +L + G +A KL + ++G
Sbjct: 577 DMINTLCKAGRIKEACKLADGITERG 602
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + TY LL + K H + D+G+ P + L GLC +G++
Sbjct: 497 EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVAR 556
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +I +L G I MIN LCK G EA L + G +I
Sbjct: 557 ACKILDELAPMGV-ILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615
Query: 124 SLFENGENDKAEKLLLEMIDKG 145
+L + G+ D A KL+ I G
Sbjct: 616 ALRKVGKADLAMKLMHSKIGIG 637
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N++TY+SL+ LCKS + + + P++ T++ L+D K G+
Sbjct: 74 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGK 133
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L ++ ++ V TY+ +I GLC DEA+ +L M +GCTPN +T+ +
Sbjct: 134 LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYST 193
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+ F++ D KLL +M +G+
Sbjct: 194 LANGFFKSSRVDDGIKLLDDMPQRGV 219
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ TY+SL+ LC + VD +G P++ TY+ L +G K+ R+ D ++
Sbjct: 152 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLL 211
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
D+ +G + +I G + G D AL + M G PN ++ ++ LF N
Sbjct: 212 DDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFAN 271
Query: 129 GENDKA 134
GE +KA
Sbjct: 272 GEVEKA 277
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M K N+IT+++L+DA K + + P++ TY+ L+ GLC R
Sbjct: 109 MDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNR 168
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A ++ ++ KG V TY+ + NG K D+ + LL M G N ++ +
Sbjct: 169 VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 228
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
+I+ F+ G+ D A + M GL+ +
Sbjct: 229 LIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T +SL++ C S+ + G++ D+ IL+D LCK + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ + +G V TY+ +I GLCK G +A L +M+ + PN ITF ++I +
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 125 LFENGENDKAEKLLLEMI 142
+ G+ K + + MI
Sbjct: 128 YAKRGKLSKVDSVYKMMI 145
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G AN ++ N+L+ ++ +D G+ P++ +YNI++ GL G
Sbjct: 214 MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGE 273
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A F + + + TYT+MI+G+CK + EA L K++ + P+ +
Sbjct: 274 VEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTI 333
Query: 121 IIRSLFENGENDKAEKL 137
+I L G +A+ L
Sbjct: 334 MIAELNRAGMRTEADAL 350
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 87.8 bits (216), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 76/147 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N++TYN+L+ LC+ + ++P++ T+ L+D K G+
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A+E+++ ++ + V TY +INGLC GL DEA + ME GC PN + + +
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I ++ + K+ EM KG++
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Score = 86.7 bits (213), Expect = 6e-18, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 73/147 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG AN ITY L+ C D + PD+ TYN+L+DGLC G+
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A IF + + I + TYT++I G+CK G ++A L + +G PN IT+ +
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I G +A+ L +M + G L
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 84.3 bits (207), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 66/119 (55%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + P +I TYN LLD LC + V+ + + ++ TY I++ G+CK G+
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
++DA ++F L KG V TYT MI+G C+ GL EA +L KM+ +G PN ++
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 76.3 bits (186), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 70/144 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G P + T N ++ +C S G +PDL T+ L++G C R
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++DA +F +L G+ V TYT +I LCK + A+ L ++M G PN +T+ +
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
++ L E G A LL +M+ +
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKR 252
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N + Y +L+ CKS V+ +GV + TY +L+ G C GR
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
AQE+F+ + + + TY V+++GLC G ++AL + M N +T+
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
II+ + + G+ + A L + KG+
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGM 464
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 69/138 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +++T+ SLL+ C + ++ G +P++ TY L+ LCK L A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+F+ + G V TY ++ GLC+ G + +A LL M PN ITF ++I +
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 125 LFENGENDKAEKLLLEMI 142
+ G+ +A++L MI
Sbjct: 268 FVKVGKLMEAKELYNVMI 285
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 62/126 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ TY SL++ LC +D G P+ Y L+ G CK+ R++D +IF
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ KG TYTV+I G C G D A + ++M P+ T+ ++ L N
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 129 GENDKA 134
G+ +KA
Sbjct: 412 GKVEKA 417
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 67/133 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+IT+ +L+DA K + V PD+ TY L++GLC G L +A+++F
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ + G + YT +I+G CK ++ + + +M +G N IT+ +I+
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 129 GENDKAEKLLLEM 141
G D A+++ +M
Sbjct: 377 GRPDVAQEVFNQM 389
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 73/142 (51%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
G N++ YN+L+D LCK+ ++ +G+ D+ TYN L+ GLC +GR D
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + D++ + + V T+T +I+ K+G DEA L +M PN +T+ SII
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 124 SLFENGENDKAEKLLLEMIDKG 145
L +G A+K M KG
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKG 311
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T+ SLL C + + G +P++ YN L+DGLCK G L A
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ +++ KG V TY ++ GLC G + +A +L M P+ +TF ++I
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ G D+A++L EMI +
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSV 277
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G A+I TYN+L+ C+ + + V PD+ T+ IL+ GLC G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A F D+ +I + Y +MI+GLCK ++A L ++ +EG P+A T+
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L +NG +A++L+ M ++G++
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEGII 488
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG A+++TYN+LL LC S + + PD+ T+ L+D K G
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +AQE++ +++ TY +INGLC G +A M +GC PN +T+ +
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + D+ KL M +G
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGF 347
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++T+ +L+D K ++D V P+ TYN +++GLC GRL DA++ F
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ KG V TY +I+G CK + DE + L +M EG + T+ ++I +
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Query: 129 GENDKAEKLLLEMIDK 144
G+ A + M+ +
Sbjct: 365 GKLRVALDIFCWMVSR 380
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G ++ ++ L+ C+ + G +P + T+ L+ G C R
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA + ++ GY V Y +I+GLCK G + AL LL++ME +G + +T+ +
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ L +G A ++L +M+ + +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSI 242
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Query: 2 HVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
KG ++I YN +L L K VD + P+L TYNIL+D LC+AG+L
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A E+ + G V T +M++ LCK DEA A+ +M+ + CTP+ ITF S+
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 122 IRSLFENGENDKAEKLLLEMID 143
I L + G D A K+ +M+D
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLD 475
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
K N+ TYN L+D LC++ +D G+ P++ T NI++D LCK+ +L +
Sbjct: 371 KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +F ++ K T+ +I+GL K G D+A + KM C N+I + S+I+
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 124 SLFENGENDKAEKLLLEMIDK 144
+ F +G + K+ +MI++
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQ 511
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N+ T+NSLLDAL K+ ++ + P+ TY IL++GLCK +
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + ++ +G + +YT MI+GL K G EA AL + + G P++ + ++I
Sbjct: 746 AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
L A L E +GL
Sbjct: 806 GLSNGNRAMDAFSLFEETRRRGL 828
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+I+ YN +D+ K VD G++PD TY ++ LCKA RL +A E+
Sbjct: 236 ADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEM 295
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F L + Y MI G G FDEA +LL + +G P+ I + I+ L +
Sbjct: 296 FEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRK 355
Query: 128 NGENDKAEKLLLEM 141
G+ D+A K+ EM
Sbjct: 356 MGKVDEALKVFEEM 369
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++TY S++D L K +D + ++ ++ Y+ L+DG K GR
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A I +L+ KG ++T+ +++ L K +EAL M+ CTPN +T+
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L + + +KA EM +G+
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGM 758
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
+Y+ L+ L K+ + +QG D YNI++DG CK G++ A ++ ++
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
KG+ TV TY +I+GL K DEA L + + + N + + S+I + G
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 132 DKAEKLLLEMIDKGLLEKL 150
D+A +L E++ KGL L
Sbjct: 674 DEAYLILEELMQKGLTPNL 692
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + YN ++D CK V+ +G +P + TY ++DGL K R
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A +F + K + V Y+ +I+G K G DEA +L ++ +G TPN T+ S
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 121 IIRSLFENGENDKA 134
++ +L + E ++A
Sbjct: 698 LLDALVKAEEINEA 711
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
N+ +D + K+ + + PD +Y+IL+ GL KAG + E+F+ +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDK 133
+G + Y ++I+G CK G ++A LL +M+ +G P +T+ S+I L + D+
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 134 AEKLLLEMIDK 144
A L E K
Sbjct: 641 AYMLFEEAKSK 651
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N I Y SL+ + +Q PDL N MD + KAG + + +F
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ + + +Y+++I+GL K G +E L M+ +GC + + +I +
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ +KA +LL EM KG
Sbjct: 601 GKVNKAYQLLEEMKTKGF 618
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+ T N ++D LCKS +D + PD T+ L+DGL K GR
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA +++ +L YT +I G ++ + M + C+P+ +
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+ +F+ GE +K + E+
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEI 543
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + + +L+ K VD + D+ YN+ +D K G+
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A + FH++ G TYT MI LCK DEA+ + +E P + +
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I G+ D+A LL KG
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKG 338
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+ G + +TY S++ LCK++ +D P YN ++ G AG+
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A + KG +V Y ++ L K G DEAL + +M+ + PN T+
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNI 382
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L G+ D A +L M GL
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLF 409
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
K +PA Y +L+ A +H D + G +P + + L+ G K GR+
Sbjct: 163 KFRPA-FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDS 221
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + ++ + Y V I+ K G D A ++E G P+ +T+ S+I
Sbjct: 222 ALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 124 SLFENGENDKAEKLL 138
L + D+A ++
Sbjct: 282 VLCKANRLDEAVEMF 296
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 45/105 (42%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
+P Y L+ +F + GY TVH +T +I G KEG D AL+
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224
Query: 102 LLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
LL +M+ + + + I S + G+ D A K E+ GL
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 70/129 (54%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G A+++ Y SL+ C +D ++G P TYN L+ G CK G+
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
LK+A EIF ++ +G V+TYT +I+GLC G EAL LL+ M + PNA+T+
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 121 IIRSLFENG 129
II L ++G
Sbjct: 358 IINKLCKDG 366
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 76/139 (54%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G ITYN+L+ CK + ++GV+P++ TY L+DGLC G+ K+
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A ++ + ++ K TY ++IN LCK+GL +A+ ++ M+ P+ IT+ ++
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 124 SLFENGENDKAEKLLLEMI 142
L G+ D+A KLL M+
Sbjct: 396 GLCAKGDLDEASKLLYLML 414
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V ++ YN LL +LCK +D PD+ ++NI++DG KAG
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K A+ + + G + TY+ +IN K G DEA++ KM G P+A +S
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+++ GE DK +L+ +++DK ++
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIV 666
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 74/145 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N+ +N LL LC++ + PD+ +YN ++ G C+
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ A E+ +++ G ++ T+ ++I+ CK G DEA+ L +M+ G + + + S
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+IR + GE D+ + L E++++G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERG 277
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +++T+ L+DA CK+ +D G++ DL Y L+ G C G
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L + +F ++L +G TY +I G CK G EA + M G PN T+
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
+I L G+ +A +LL MI+K
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEK 346
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ +YN+++ C+ ++ G L T+ IL+D CKAG++ +A
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G + YT +I G C G D AL ++ G +P AIT+ ++IR +
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ +A ++ MI++G+
Sbjct: 296 GQLKEASEIFEFMIERGV 313
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 75/176 (42%), Gaps = 40/176 (22%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQG--VQPDLCTYNILMDGLCKAGRL 61
+ +P NI TYN LL LC +D PD+ +YN L+ GLCK RL
Sbjct: 382 RTRPDNI-TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 62 KDAQEIFHDLLIK----GYHITVH--------------------------------TYTV 85
A +I+ DLL++ G +T + TYT
Sbjct: 441 HQALDIY-DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 86 MINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
MI+G CK G+ + A LL KM + P+ + ++ SL + G D+A +L EM
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+T N LL++ K+ V+ D + + TY ++DG CK G L A+ +
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ + +V Y +++ LCKEG D+A L +M+ + P+ ++F +I + G+
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 131 NDKAEKLLLEMIDKGL 146
AE LL+ M GL
Sbjct: 580 IKSAESLLVGMSRAGL 595
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
K + N +TYN +++ LCK V + +PD TYNIL+ GLC G L +
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 64 AQEIFHDLLIKGYHIT---VHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A ++ + L++K T V +Y +I+GLCKE +AL + + + + +T
Sbjct: 406 ASKLLY-LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLE 148
++ S + G+ +KA +L ++ D ++
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVR 492
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 87.4 bits (215), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+ TYN LL ALCK++ VD ++G PD +Y ++ +C+ G
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K+ +E L + + V Y +INGLCKE + A L+ +M +G +PN I++ +
Sbjct: 232 VKEGRE-----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I L +G+ + A L +M+ +G
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRG 311
Score = 79.3 bits (194), Expect = 8e-16, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP N++ YN+L+ C ++ + G P++ TY L++G K G L A
Sbjct: 349 QP-NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
I++ +L G V YT M+ LC+ F EA +L+ M E C P+ TF + I+ L
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 126 FENGENDKAEKLLLEM 141
+ G D AEK+ +M
Sbjct: 468 CDAGRLDWAEKVFRQM 483
Score = 75.5 bits (184), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQG-VQPDLCTYNILMDGLCKAGRLKDAQEI 67
++ T+N+ + LC + +D Q P++ TYN L+DGL KA R+++A +
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
++ ++G + TY +++G C GL AL L+ KM ++G +P+ IT II + +
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 128 NGENDKAEKLL 138
G+ ++A ++L
Sbjct: 576 QGKAERAAQML 586
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N+I+Y++L++ LC S ++ +G P++ T + L+ G G D
Sbjct: 275 KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD 334
Query: 64 AQEIFHDLLIKGYHI--TVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A ++++ + I+G+ + V Y ++ G C G +A+++ S ME GC+PN T+ S+
Sbjct: 335 ALDLWNQM-IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
I + G D A + +M+ G
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSG 417
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G P + YN ++D L R++ ++ D+ G+ V TY V++ LCK D A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENG 129
LL +M +GC P+A+++ ++I S+ E G
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G NI TY SL++ K +D G P++ Y +++ LC+ +
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAITFE 119
K+A+ + + + +V T+ I GLC G D A + +ME + C PN +T+
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGL 146
++ L + ++A L E+ +G+
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGV 524
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P NI+TYN LLD L K++ ++ +GV+ TYN L+ G C AG A +
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGC-----TPNAITFESI 121
+ +++ G T ++I CK+G + A +L ++ C P+ I++ ++
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML---DLVSCGRRKWRPDVISYTNV 606
Query: 122 IRSLFENGENDKAEKLLLEMIDKGLLEKL 150
I L + + LL MI G++ +
Sbjct: 607 IWGLCRSNCREDGVILLERMISAGIVPSI 635
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 87.4 bits (215), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 80/141 (56%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + ++Y +L+D CK +V+ +GVQP+ TYN+++ CK G++K+A
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+++ ++ G +TYT +I+G C DEA+ L S+M ++G N++T+ +I
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583
Query: 125 LFENGENDKAEKLLLEMIDKG 145
L + G++D+A L EM KG
Sbjct: 584 LSKAGKSDEAFGLYDEMKRKG 604
Score = 73.6 bits (179), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 63/125 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N ITYN ++ A CK + G+ PD TY L+ G C A
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A +F ++ +KG TYTVMI+GL K G DEA L +M+ +G T + + +
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTA 614
Query: 121 IIRSL 125
+I S+
Sbjct: 615 LIGSM 619
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 74/144 (51%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
VKG TYN++++A K GV + TY +LM+ K G++
Sbjct: 252 VKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMS 311
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
DA+++F ++ +G VH YT +I+ C++G A L ++ +G +P++ T+ ++I
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 123 RSLFENGENDKAEKLLLEMIDKGL 146
+ + GE AE L+ EM KG+
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGV 395
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++ Y SL+ C+ ++ ++G+ P TY L+DG+CK G
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A+ + +++ KG +IT + +I+G C++G+ DEA + ME +G + T +
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
I D+A++ L M++ G+
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGV 465
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 69/146 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG A++ T N++ + D + GV+ +Y L+D CK G
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A+ +F ++ KG TY VMI CK+G EA L + ME G P++ T+ S
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I D+A +L EM KGL
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKGL 570
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + +N+L+D C+ VD +G Q D+ T N + + R
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A++ ++ G ++ +YT +I+ CKEG +EA L +M +G PNAIT+
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + G+ +A KL M G+
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGM 535
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 65/131 (49%)
Query: 16 LLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKG 75
L A K +D D GV+ + + I+++GLC+ G ++ ++++ + +KG
Sbjct: 195 FLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKG 254
Query: 76 YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAE 135
+TY +IN K+ F +L M+ +G N +T+ ++ +NG+ AE
Sbjct: 255 IKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAE 314
Query: 136 KLLLEMIDKGL 146
KL EM ++G+
Sbjct: 315 KLFDEMRERGI 325
Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N +TY L++ K+ + ++G++ D+ Y L+ C+ G
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K A +F +L KG + +TY +I+G+CK G A L+++M+ +G + F +
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I G D+A + M KG
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGF 430
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 57 KAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAI 116
K R+ EIF ++ G ITV++ T+++ GLC+ G +++ L+ + ++G P A
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 117 TFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
T+ +II + + + E +L M G++
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVV 291
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 6 QPANIITYNSLLDALC-----------KSHHVDXXXXXXXXXXDQ----GVQPDLCTYNI 50
QP +++T+N+LL LC + V+ DQ G+ P + T+N
Sbjct: 173 QP-DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 51 LMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG 110
L++GLC GR+ +A + + ++ KG HI V TY ++NG+CK G AL LLSKME
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 111 CTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
P+ + + +II L ++G + A+ L EM++KG+
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG +++TY ++++ +CK + ++PD+ Y+ ++D LCK G D
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
AQ +F ++L KG V TY MI+G C G + +A LL M P+ +TF ++I
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
+ + G+ +AEKL EM+ + +
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIF 398
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + IT N LL C++ ++ + D YNI++ G+CK ++ +A
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F L I G V TY VMI+G C + +A L KM+ G P+ T+ ++IR
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ GE DK+ +L+ EM G
Sbjct: 617 CLKAGEIDKSIELISEMRSNGF 638
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 2 HVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
H+K +++ Y++++D LCK H ++G+ P++ TYN ++DG C GR
Sbjct: 291 HIK---PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
DAQ + D++ + + V T+ +I+ KEG EA L +M P+ +T+ S+
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 122 IRSLFENGENDKAEKLL 138
I ++ D A+ +
Sbjct: 408 IYGFCKHNRFDDAKHMF 424
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G AN TYN+L+ C+ +++ GV PD T NIL+ G C+ +L++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A E+F + + + Y ++I+G+CK DEA L + I G P+ T+ +I
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 124 SLFENGENDKAEKLLLEMIDKG 145
A L +M D G
Sbjct: 581 GFCGKSAISDANVLFHKMKDNG 602
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N+ TYN ++D C ++ + PD+ T+N L+ K G+L +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+++ ++L + TY MI G CK FD+A + M +P+ +TF +II
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIID 440
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
D+ +LL E+ +GL+
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLV 464
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+ + YN ++ +CK VD GV+PD+ TYN+++ G C + DA +F
Sbjct: 536 DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF 595
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF---------- 118
H + G+ TY +I G K G D+++ L+S+M G + +A T
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRV 655
Query: 119 --ESIIRSLFE---NGENDKAEKLLLEMIDK 144
E II + NGE + ++E+ ++
Sbjct: 656 SDEEIIENYLRPKINGETSSIPRYVVELAEE 686
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 67/138 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++T+N+++D C++ VD +G+ + TYN L+ G C+ L AQ++F
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ G T +++ G C+ +EAL L +++ + + + II + +
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 129 GENDKAEKLLLEMIDKGL 146
+ D+A L + G+
Sbjct: 551 SKVDEAWDLFCSLPIHGV 568
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+ +TYNS++ CK + D D PD+ T+N ++D C+A R+ + ++
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TY +I+G C+ + A L +M G P+ IT ++ EN
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 129 GENDKAEKLL 138
+ ++A +L
Sbjct: 516 EKLEEALELF 525
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 6 QPANIITYNSLLDALC-----------KSHHVDXXXXXXXXXXDQ----GVQPDLCTYNI 50
QP +++T+N+LL LC + V+ DQ G+ P + T+N
Sbjct: 173 QP-DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 51 LMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG 110
L++GLC GR+ +A + + ++ KG HI V TY ++NG+CK G AL LLSKME
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 111 CTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
P+ + + +II L ++G + A+ L EM++KG+
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Score = 82.8 bits (203), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG +++TY ++++ +CK + ++PD+ Y+ ++D LCK G D
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
AQ +F ++L KG V TY MI+G C G + +A LL M P+ +TF ++I
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 124 SLFENGENDKAEKLLLEMIDK 144
+ + G+ +AEKL EM+ +
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHR 395
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + IT N LL C++ ++ + D YNI++ G+CK ++ +A
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F L I G V TY VMI+G C + +A L KM+ G P+ T+ ++IR
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ GE DK+ +L+ EM G
Sbjct: 617 CLKAGEIDKSIELISEMRSNGF 638
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 2 HVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
H+K +++ Y++++D LCK H ++G+ P++ TYN ++DG C GR
Sbjct: 291 HIK---PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
DAQ + D++ + + V T+ +I+ KEG EA L +M P+ +T+ S+
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 122 IRSLFENGENDKAEKLL 138
I ++ D A+ +
Sbjct: 408 IYGFCKHNRFDDAKHMF 424
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G AN TYN+L+ C+ +++ GV PD T NIL+ G C+ +L++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A E+F + + + Y ++I+G+CK DEA L + I G P+ T+ +I
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 124 SLFENGENDKAEKLLLEMIDKG 145
A L +M D G
Sbjct: 581 GFCGKSAISDANVLFHKMKDNG 602
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+ + YN ++ +CK VD GV+PD+ TYN+++ G C + DA +F
Sbjct: 536 DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF 595
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
H + G+ TY +I G K G D+++ L+S+M G + +A T + ++ L +
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITD 654
Query: 129 GENDKA 134
G DK+
Sbjct: 655 GRLDKS 660
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N+ TYN ++D C ++ + PD+ T+N L+ K G+L +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+++ ++L + TY MI G CK FD+A + M +P+ +TF +II
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIID 440
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
D+ +LL E+ +GL+
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLV 464
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 65/133 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++T+N+++D C++ VD +G+ + TYN L+ G C+ L AQ++F
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ G T +++ G C+ +EAL L +++ + + + II + +
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 129 GENDKAEKLLLEM 141
+ D+A L +
Sbjct: 551 SKVDEAWDLFCSL 563
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+ +TYNS++ CK + D D PD+ T+N ++D C+A R+ + ++
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TY +I+G C+ + A L +M G P+ IT ++ EN
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 129 GENDKAEKLL 138
+ ++A +L
Sbjct: 516 EKLEEALELF 525
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 86.7 bits (213), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 77/143 (53%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G NI T N L+ ALCK + ++ G+ P+L TY ++ G G ++ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + ++L +G++ TYTV+++G CK G F EA ++ ME PN +T+ +IR+
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
L + ++ +A + EM+++ +
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFM 328
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
++L+ LCK V ++G P L TYN L+ G+C+ G L +A ++ D+
Sbjct: 370 STLIHWLCKEGRV-TEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDK 133
+ TY V+I GL K G E + +L +M GC PN TF + L + G+ +
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEED 488
Query: 134 AEKLLLEMIDKGLLEK 149
A K++ + G ++K
Sbjct: 489 AMKIVSMAVMNGKVDK 504
Score = 59.3 bits (142), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + TY L+D CK ++P+ TY +++ LCK + +
Sbjct: 255 RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE 314
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+ +F ++L + + +I+ LC++ DEA L KM C P+ ++I
Sbjct: 315 ARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIH 374
Query: 124 SLFENGENDKAEKLLLEMIDKGLLEKL 150
L + G +A KL E +KG + L
Sbjct: 375 WLCKEGRVTEARKLFDEF-EKGSIPSL 400
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 56/107 (52%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG +++TYN+L+ +C+ + ++ +P+ TYN+L++GL K G +K+
Sbjct: 394 KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKE 453
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG 110
+ ++L G T+ ++ GL K G ++A+ ++S + G
Sbjct: 454 GVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 86.7 bits (213), Expect = 6e-18, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 77/147 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +++ YN+++D CK V+ GV+ D TYN L+ GLC +GR
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
DA + D++++ V T+T +I+ KEG F EA+ L +M P+ T+ S
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L +G D+A+++L M+ KG L
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCL 311
Score = 84.0 bits (206), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 68/133 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+IT+ +++D K + V PD+ TYN L++GLC GR+ +A+++
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG V TY +ING CK DE L +M G + IT+ +II+ F+
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 129 GENDKAEKLLLEM 141
G D A+++ M
Sbjct: 363 GRPDAAQEIFSRM 375
Score = 82.8 bits (203), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G A+ +TYNSL+ LC S + + P++ T+ ++D K G+
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A +++ ++ + V TY +INGLC G DEA +L M +GC P+ +T+ +
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I ++ D+ KL EM +GL+
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLV 346
Score = 82.0 bits (201), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 69/137 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +++T +SL++ C+ + V + G +PD+ YN ++DG CK G + DA
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+F + G TY ++ GLC G + +A L+ M + PN ITF ++I
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 125 LFENGENDKAEKLLLEM 141
+ G+ +A KL EM
Sbjct: 254 FVKEGKFSEAMKLYEEM 270
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +++TYN+L++ CKS VD +G+ D TYN ++ G +AGR
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 61 LKDAQEIF-----------HDLLIKGY---------------------HITVHTYTVMIN 88
AQEIF + +L+ G + + TY ++I+
Sbjct: 365 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 424
Query: 89 GLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
G+CK G ++A L + +G P+ +++ ++I + DK++ L +M + GLL
Sbjct: 425 GMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 77/147 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V G ++ +YN +++ LC+ G +PD+ T + L++G C+ R
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA ++ + G+ V Y +I+G CK GL ++A+ L +ME +G +A+T+ S
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ L +G A +L+ +M+ + ++
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIV 241
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 59/105 (56%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
NI TY+ LL LC + V+ ++ D+ TYNI++ G+CK G ++DA ++F
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTP 113
L KG V +YT MI+G C++ +D++ L KM+ +G P
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ TYNSL++ LC VD +G PD+ TYN L++G CK+ R+ + ++F
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TY +I G + G D A + S+M+ PN T+ ++ L N
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD---SRPNIRTYSILLYGLCMN 394
Query: 129 GENDKAEKLLLEMIDKGLLE 148
+KA +L E + K +E
Sbjct: 395 WRVEKA-LVLFENMQKSEIE 413
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 86.3 bits (212), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P N++ +N LL ALCKS +V D+ PD TY+IL++G K L A+E
Sbjct: 200 PPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKARE 258
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+F +++ G H + TY++M++ LCK G DEAL ++ M+ C P + ++ +
Sbjct: 259 VFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYG 318
Query: 127 ENGENDKAEKLLLEMIDKGL 146
++A LEM G+
Sbjct: 319 TENRLEEAVDTFLEMERSGM 338
Score = 66.2 bits (160), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 64/134 (47%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I+TY+ ++D LCK+ VD +P Y++L+ RL++A + F
Sbjct: 271 DIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTF 330
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G V + +I CK +L +M+ +G TPN+ + I+R L E
Sbjct: 331 LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIER 390
Query: 129 GENDKAEKLLLEMI 142
GE D+A + +MI
Sbjct: 391 GEKDEAFDVFRKMI 404
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G A++ +NSL+ A CK++ + +GV P+ + NI++ L + G
Sbjct: 333 MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A ++F +IK TYT++I C++ + A + M +G P+ TF
Sbjct: 393 KDEAFDVFRK-MIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSV 451
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L E KA LL EMI+ G+
Sbjct: 452 LINGLCEERTTQKACVLLEEMIEMGI 477
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G++ D+ +N L+ CKA R+K+ + ++ KG + +++ L + G DEA
Sbjct: 337 GMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEA 396
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
+ KM I+ C P+A T+ +I+ E E + A+K+ M KG+ +
Sbjct: 397 FDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSM 446
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 77/143 (53%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ YNSL++ CK + ++ ++P + TY LM G C G++ A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++H++ KG +++T+T +++GL + GL +A+ L ++M PN +T+ +I
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
E G+ KA + L EM +KG++
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIV 574
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+ YN+L+D+LCK G++P+ TY+IL+D C+ G+L A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+++ G ++V+ Y +ING CK G A +++M + P +T+ S++
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
G+ +KA +L EM KG+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGI 503
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N +TY+ L+D C+ +D D G++ + YN L++G CK G + A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ +++ K TV TYT ++ G C +G ++AL L +M +G P+ TF +++
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 125 LFENGENDKAEKLLLEMID 143
LF G A KL EM +
Sbjct: 517 LFRAGLIRDAVKLFNEMAE 535
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 4 KGQPA----NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAG 59
K QP N +TY LD L K +G+ + TYN+L+ G C+ G
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG 801
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
R+++A E+ ++ G TYT MIN LC+ +A+ L + M +G P+ + +
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGLL 147
++I GE KA +L EM+ +GL+
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLI 889
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 35/181 (19%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
MH +G + + Y S++DA K+ ++G P+ TY +++GLCKAG
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 61 LKDAQEI-----------------------------------FHDLLIKGYHITVHTYTV 85
+ +A+ + H+ ++KG TY +
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 86 MINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
+I G C++G +EA L+++M +G +P+ IT+ ++I L + KA +L M +KG
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 146 L 146
+
Sbjct: 853 I 853
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G NI+ YN L+D LCK V + ++PD+ TY L+ GLCK
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ E+ ++L + + + ++ GL K G +EAL L+ ++ G +PN + +
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I SL + + +AE L M GL
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGL 398
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
+SL++ L K ++ D GV P+L YN L+D LCK + +A+ +F +
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDK 133
G TY+++I+ C+ G D AL+ L +M G + + S+I + G+
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 134 AEKLLLEMIDKGL 146
AE + EMI+K L
Sbjct: 456 AEGFMAEMINKKL 468
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +I T+ +LL L ++ + + V+P+ TYN++++G C+ G
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A E ++ KG ++Y +I+GLC G EA + + C N I +
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ G+ ++A + EM+ +G+
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++ Y L+D K D+G++PD Y ++D K G
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
K+A I+ ++ +G TYT +INGLCK G +EA L SKM+ PN +T+
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 121 IIRSLFENGENDKAEKLLL-EMIDKGLL 147
+ + GE D + + L I KGLL
Sbjct: 758 FL-DILTKGEVDMQKAVELHNAILKGLL 784
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
+KG AN TYN L+ C+ ++ GV PD TY +++ LC+ +K
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAIT 117
A E+++ + KG Y +I+G C G +A L ++M +G PN T
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +TYN +++ C+ + ++G+ PD +Y L+ GLC G+ +A+ +F
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VF 599
Query: 69 HDLLIKGY-HITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
D L KG + YT +++G C+EG +EAL++ +M G + + + +I +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 128 NGENDKAEKLLLEMIDKGL 146
+ + LL EM D+GL
Sbjct: 660 HKDRKLFFGLLKEMHDRGL 678
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ Y ++ +LC+ + G ++ YN+L+DGLCK ++ +A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
I DL K V TY ++ GLCK F+ L ++ +M +P+ S++
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 125 LFENGENDKAEKLLLEMIDKGLLEKL 150
L + G+ ++A L+ ++D G+ L
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNL 367
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
+ T ++LL L K H G++PD+ Y ++ LC+ L A+E+
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
+ G + + Y V+I+GLCK+ EA+ + + + P+ +T+ +++ L +
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 130 ENDKAEKLLLEMI 142
E + +++ EM+
Sbjct: 312 EFEIGLEMMDEML 324
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 67/176 (38%), Gaps = 35/176 (19%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + +Y L+ LC + + + Y L+ G C+ G+
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 61 LKDAQEIFHDLLIKG-------YHITVH----------------------------TYTV 85
L++A + +++ +G Y + + YT
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 86 MINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
MI+ K G F EA + M EGC PN +T+ ++I L + G ++AE L +M
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + TYN+L+ C++ ++ D GV PD+ TYNIL+D LC G+
Sbjct: 350 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 409
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A + DL + + TY ++I GLC+ EA L + +G P+AI + +
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L G +A+KL M + G +
Sbjct: 470 MISGLCRKGLQREADKLCRRMKEDGFM 496
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+TYN LLD LC + ++ + D+ TYNI++ GLC+ +LK+A
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+F L KG Y MI+GLC++GL EA L +M+ +G P+ ++ +R
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N++ YN++++ LCK+ ++ +G++ D TYN L+ GL +GR DA
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ D++ + V +T +I+ KEG EA L +M PN T+ S+I
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 125 LFENGENDKAEKLLLEMIDKG 145
+G A+ + M+ KG
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKG 319
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T SLL+ C+ + G P++ YN +++GLCK L +A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+F+ + KG TY +I+GL G + +A LL M PN I F ++I +
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 125 LFENGENDKAEKLLLEMIDKGLLEKL 150
+ G +A L EMI + ++ +
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNV 289
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+I + +L+D K ++ + V P++ TYN L++G C G L DA+ +F
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG V TY +I G CK ++ + L +M +G +A T+ ++I +
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ + A+K+ M+D G+
Sbjct: 373 GKLNVAQKVFNRMVDCGV 390
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG A+ +TYN+L+ L S + + P++ + L+D K G
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A+ ++ +++ + V TY +ING C G +A + M +GC P+ +T+ +
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I ++ + KL EM +GL+
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLV 356
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ ++ L+ C+ + G +P + T L++G C+ R ++A
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + G+ V Y +INGLCK + AL + ME +G +A+T+ ++I
Sbjct: 169 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L +G A +LL +M+ + +
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKI 250
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
++ +P +I+ + +L + K + D + G+ DL ++ IL+ C+ RL
Sbjct: 71 LQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRL 130
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A + ++ G+ ++ T ++NG C+ F EA++L+ M+ G PN + + ++
Sbjct: 131 SLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTV 190
Query: 122 IRSLFENGENDKAEKLLLEMIDKGL 146
I L +N + + A ++ M KG+
Sbjct: 191 INGLCKNRDLNNALEVFYCMEKKGI 215
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 77/134 (57%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG ++++Y+ L+D L K +V+ +GV+P+L TY ++ GLCK G+L++
Sbjct: 271 KGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEE 330
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +F+ +L G + Y +I+G+C++G + A ++L ME G P+ +T+ ++I
Sbjct: 331 AFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVIN 390
Query: 124 SLFENGENDKAEKL 137
L G +A+++
Sbjct: 391 GLCMAGRVSEADEV 404
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++TY +L+ ALC+ VD D+G + D Y+ + G K G L DA
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ KG + V +Y+++I+GL KEG +EAL LL KM EG PN IT+ +IIR L +
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ ++A L ++ G+
Sbjct: 326 GKLEEAFVLFNRILSVGI 343
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 76/143 (53%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G N ITYNSL++ LC+ + + G+ P TY IL+D LCK G D
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+++ ++ KG + Y +++G CK G ++A+ ++S+ + TP+A T S+I+
Sbjct: 744 AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIK 803
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ G+ ++A + E DK +
Sbjct: 804 GYCKKGDMEEALSVFTEFKDKNI 826
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++I Y +++ LCK + +GV + TYN L++GLC+ G L +A +F
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
L G + TY ++I+ LCKEGLF +A LL M +G PN I + SI+ +
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 129 GENDKAEKLL 138
G+ + A +++
Sbjct: 774 GQTEDAMRVV 783
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
D+ Y I+++GLCK G L A + +G + TY +INGLC++G EAL L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 104 SKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
+E G P+ +T+ +I +L + G AEKLL M+ KGL+ +
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 760
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+TY L+D LCK +G+ P++ YN ++DG CK G+ +DA +
Sbjct: 726 VTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSR 785
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
++ T + MI G CK+G +EAL++ ++ + + + + F +I+ G
Sbjct: 786 KMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGR 845
Query: 131 NDKAEKLLLEMI 142
++A LL EM+
Sbjct: 846 MEEARGLLREML 857
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 41/181 (22%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +I+TYN++++ LC + V +GV D+ TY+ L+D K
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQN 427
Query: 61 LKDAQEIFH--------------DLLIKGYHIT---------------------VHTYTV 85
+ EI ++L+K + + TY
Sbjct: 428 IDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYAT 487
Query: 86 MINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
MI G CK G +EAL + +++ + A+ + II +L + G D A ++L+E+ +KG
Sbjct: 488 MIKGYCKTGQIEEALEMFNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Query: 146 L 146
L
Sbjct: 547 L 547
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 40/153 (26%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY +++ CK+ ++ V +C YN ++D LCK G L A E+ +L
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVC-YNRIIDALCKKGMLDTATEVLIEL 542
Query: 72 LIKGYHITVHT-----YTVMING------------------------------LCKEGLF 96
KG ++ +HT +++ NG LCK G F
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSF 602
Query: 97 DEALALLSKMEIEGCTPNAITFES-IIRSLFEN 128
+ A+ + M +G T +TF S I+++L +N
Sbjct: 603 EAAIEVYMIMRRKGLT---VTFPSTILKTLVDN 632
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 68/128 (53%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
ITYNS++D CK VD +G PD+ T++ L++G CKA R+ + EIF +
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ +G TYT +I+G C+ G D A LL++M G P+ ITF ++ L E
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 131 NDKAEKLL 138
KA +L
Sbjct: 131 LRKAFAIL 138
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%)
Query: 43 PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL 102
P TYN ++DG CK R+ DA+ + + KG V T++ +ING CK D + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 103 LSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+M G N +T+ ++I + G+ D A+ LL EMI G+
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 111
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +++T+++L++ CK+ VD +G+ + TY L+ G C+ G
Sbjct: 36 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 95
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME 107
L AQ++ ++++ G T+ M+ GLC + +A A+L ++
Sbjct: 96 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 142
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 79 TVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLL 138
T TY MI+G CK+ D+A +L M +GC+P+ +TF ++I + D ++
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 139 LEMIDKGLL 147
EM +G++
Sbjct: 69 CEMHRRGIV 77
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 85.5 bits (210), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 74/138 (53%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N + L++ CK V DQG+ D TY +LM+GL K ++ DA+EIF
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG V +Y V+ING K G +A ++ +M EG TPN I + ++ +
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 129 GENDKAEKLLLEMIDKGL 146
GE +KA++LL EM KGL
Sbjct: 676 GEIEKAKELLDEMSVKGL 693
Score = 83.6 bits (205), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 77/136 (56%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY L++ L K+ VD +G+ PD+ +Y +L++G K G ++ A IF ++
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ +G V Y +++ G C+ G ++A LL +M ++G PNA+T+ +II ++G+
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 132 DKAEKLLLEMIDKGLL 147
+A +L EM KGL+
Sbjct: 714 AEAFRLFDEMKLKGLV 729
Score = 77.4 bits (189), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 67/122 (54%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++ +Y L++ K ++ ++G+ P++ YN+L+ G C++G
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A+E+ ++ +KG H TY +I+G CK G EA L +M+++G P++ + +
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 121 II 122
++
Sbjct: 738 LV 739
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G N+I YN LL C+S ++ +G+ P+ TY ++DG CK+G L +
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +F ++ +KG YT +++G C+ + A+ + + +GC + F ++I
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALIN 774
Query: 124 SLFENGENDKAEKLLLEMID 143
+F+ G+ + ++L ++D
Sbjct: 775 WVFKFGKTELKTEVLNRLMD 794
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G+P N +TYN ++D LCK +++ + + P + TY L++G K GR +
Sbjct: 801 GKP-NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEI-----EGCTPNAITFE 119
+F + + G Y+V+IN KEG+ +AL L+ +M +GC + T
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919
Query: 120 SIIRSLFENGENDKAEKLLLEMI 142
+++ + GE + AEK++ M+
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMV 942
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 65/136 (47%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY+ L+D LCK ++ GV D TY++L+DGL K A+ + H++
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ G +I + Y I + KEG+ ++A AL M G P A + S+I
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 132 DKAEKLLLEMIDKGLL 147
+ +LL+EM + ++
Sbjct: 399 RQGYELLVEMKKRNIV 414
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 14/118 (11%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEG--- 94
D+ +P+ TYNI++D LCK G L+ A+E+FH + TV TYT ++NG K G
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857
Query: 95 ----LFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLE 148
+FDEA+A G P+ I + II + + G KA L+ +M K ++
Sbjct: 858 EMFPVFDEAIA-------AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Score = 62.8 bits (151), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 61/136 (44%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY +++ +C S +D G +P++ Y L+ + R DA + ++
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+G + Y +I GL K DEA + L +M G PNA T+ + I E E
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 132 DKAEKLLLEMIDKGLL 147
A+K + EM + G+L
Sbjct: 539 ASADKYVKEMRECGVL 554
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 57/107 (53%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G+ P Y L++G C+ ++ E+ ++ + I+ +TY ++ G+C G D A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
++ +M GC PN + + ++I++ +N A ++L EM ++G+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
+G+ P TY++L+DGLCK RL+DA+ + ++ G + HTY+++I+GL K D
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 99 ALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLEK 149
A L+ +M G ++ I + + G +KA+ L MI GL+ +
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N++ Y +L+ ++ +QG+ PD+ YN L+ GL KA R
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A+ +++ G TY I+G + F A + +M G PN +
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + G+ +A M+D+G+L
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGIL 589
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 35/181 (19%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGL----- 55
M +G +I YNSL+ L K+ +D + G++P+ TY + G
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 56 ------------------------------CKAGRLKDAQEIFHDLLIKGYHITVHTYTV 85
CK G++ +A + ++ +G TYTV
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 86 MINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
++NGL K D+A + +M +G P+ ++ +I + G KA + EM+++G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 146 L 146
L
Sbjct: 658 L 658
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Query: 16 LLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF------- 68
LLDAL + + +D ++ V D+ TY++L+ C+AG ++ +++
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251
Query: 69 --------------HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPN 114
++ KG +TY V+I+GLCK ++A +LL +M+ G + +
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311
Query: 115 AITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
T+ +I L + D A+ L+ EM+ G+
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 59/134 (44%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY+ L+D L K + D G+ Y+ + + K G ++ A+ +F +
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ G Y +I G C+E + LL +M+ + T+ ++++ + +G+
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 132 DKAEKLLLEMIDKG 145
D A ++ EMI G
Sbjct: 434 DGAYNIVKEMIASG 447
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 85.5 bits (210), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 68/130 (52%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +++TYN+LL K D + V P+L TY+ L+DG K G K+A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
EIF + G V Y+ +I+ LCK GL A++L+ +M EG +PN +T+ SII +
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 125 LFENGENDKA 134
+ D++
Sbjct: 594 FGRSATMDRS 603
Score = 72.8 bits (177), Expect = 7e-14, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 76/142 (53%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ +YN+LLDA+CK +D + + P++ +Y+ ++DG KAGR +A +F
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G + +Y +++ K G +EAL +L +M G + +T+ +++ +
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 129 GENDKAEKLLLEMIDKGLLEKL 150
G+ D+ +K+ EM + +L L
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNL 514
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + IT+NSLL + + ++ ++ D+ +YN L+D +CK G+
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A EI + +K V +Y+ +I+G K G FDEAL L +M G + +++ +
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + G +++A +L EM G+
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGI 475
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCK-SHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAG 59
M G N++TYN+++DA K GVQPD T+N L+ + G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
+ A+ +F ++ + V +Y +++ +CK G D A +L++M ++ PN +++
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 120 SIIRSLFENGENDKAEKLLLEM 141
++I + G D+A L EM
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEM 435
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 70/146 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M VK N+++Y++++D K+ D G+ D +YN L+ K GR
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR 459
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++A +I ++ G V TY ++ G K+G +DE + ++M+ E PN +T+ +
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + G +A ++ E GL
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGL 545
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 51 LMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG 110
++ L + G++ A+ IF GY TV+ ++ +I+ + GL +EA+++ + M+ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 111 CTPNAITFESIIRSLFENG-ENDKAEKLLLEMIDKGL 146
PN +T+ ++I + + G E + K EM G+
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGV 335
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 85.5 bits (210), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 71/134 (52%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN+++ C ++GV+PD TYN L+ GL KAGR+++A+ ++
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
GY TYT ++NG+C++G AL+LL +ME GC PN T+ +++ L + D
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMD 387
Query: 133 KAEKLLLEMIDKGL 146
K +L M G+
Sbjct: 388 KGMELYEMMKSSGV 401
Score = 73.9 bits (180), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQ-GVQPDLCTYNILMDGLCKAGRLK 62
K P + TYN LL LCK + D V+PDL ++ IL+D +C + L+
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+A + L G+ Y ++ G C EA+ + KM+ EG P+ IT+ ++I
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 123 RSLFENGENDKAEKLLLEMIDKG 145
L + G ++A L M+D G
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAG 330
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + ITYN+L+ L K+ V+ D G +PD TY LM+G+C+ G
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A + ++ +G TY +++GLCK L D+ + L M+ G + + +
Sbjct: 351 SLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Query: 121 IIRSLFENGENDKAEKLLLEMID 143
++RSL ++G+ +A ++ +D
Sbjct: 411 LVRSLVKSGKVAEAYEVFDYAVD 433
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+T + + +LC++ VD ++ PD TYN L+ LCK L E F D
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYE-FVD 218
Query: 71 LLIKGYHIT--VHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ + + + ++T++I+ +C EA+ L+SK+ G P+ + +I++
Sbjct: 219 EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 129 GENDKAEKLLLEMIDKGL 146
+ +A + +M ++G+
Sbjct: 279 SKGSEAVGVYKKMKEEGV 296
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N +TYN+LL +LC + D P + TYNIL++GLCKA L A
Sbjct: 309 GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRA 368
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ F+ +L + + TY ++ + KEG+ D+A+ LL ++ C P IT+ S+I
Sbjct: 369 IDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDG 428
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
L + G KA +L +M+D G+
Sbjct: 429 LAKKGLMKKALELYHQMLDAGIF 451
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 73/138 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V+G +I+TYNSL++ C+ +++ G++ + TYN L+ LC
Sbjct: 270 MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEY 329
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +EI + + Y TV TY ++INGLCK L A+ +M + C P+ +T+ +
Sbjct: 330 WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNT 389
Query: 121 IIRSLFENGENDKAEKLL 138
++ ++ + G D A +LL
Sbjct: 390 VLGAMSKEGMVDDAIELL 407
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P +ITYNS++D L K + D G+ PD T L+ G C+A +++A +
Sbjct: 416 PPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQ 475
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+ + +G I TY ++I GLCK+ + A+ ++ M GC P+ + +I++ +
Sbjct: 476 VLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVE 535
Query: 127 ENGENDKA 134
E G +A
Sbjct: 536 EMGMGSEA 543
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G + ITYN ++ LCK H+ G PD+ TYN ++ + G
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A + D L G + TYTV++ +C+ A+ +L M +EGC P+ +T+ S
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ G ++ ++ ++ GL
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGL 310
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 69/138 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G P ++ITYN+++ + + + G P + TY +L++ +C+
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A E+ D+ ++G + + TY ++N C+ G +E +++ + G N +T+ +
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 121 IIRSLFENGENDKAEKLL 138
++ SL + D+ E++L
Sbjct: 320 LLHSLCSHEYWDEVEEIL 337
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I+TYN++L A+ K VD + P L TYN ++DGL K G +K A E++
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELY 442
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
H +L G T +I G C+ L +EA +L + G T+ +I+ L +
Sbjct: 443 HQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKK 502
Query: 129 GENDKAEKLLLEMIDKG 145
E + A +++ M+ G
Sbjct: 503 KEIEMAIEVVEIMLTGG 519
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T N +L LC + + P + + L+ GL + +L A I +
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
++ G TY ++I LCK+G AL LL M + G P+ IT+ ++IR +F+ G
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 132 DKAEKLLLEMIDKG 145
++A + + + G
Sbjct: 226 EQAIRFWKDQLQNG 239
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T+N+L+DA K + + + PD TYN+L++G C RL +A+++F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K + TY +ING CK ++ + L +M G N +T+ +II+ F+
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 129 GENDKAEKLLLEMI 142
G+ D A+ + +M+
Sbjct: 447 GDCDSAQMVFKQMV 460
Score = 82.8 bits (203), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 79/146 (54%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++TY ++++ LCK +D ++ ++ +N ++D LCK
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A ++F ++ KG V TY +IN LC G + +A LLS M + PN +TF +
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + F+ G+ +AEKL EMI + +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSI 359
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
AN++ +N+++D+LCK HV+ +G++P++ TYN L++ LC GR DA +
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
++L K + V T+ +I+ KEG EA L +M P+ IT+ +I
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 128 NGENDKAEKLLLEMIDKGLLEKL 150
+ D+A+++ M+ K L +
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNI 398
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P +I+TY+ LL LC +D ++ ++ YN +++G+CKAG++ +A +
Sbjct: 465 PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD 524
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+F L IK V TY MI+GLC + L EA L KM+ +G PN+ T+ ++IR+
Sbjct: 525 LFCSLSIKP---DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 127 ENGENDKAEKLLLEMIDKGLL 147
+ + + +L+ EM G +
Sbjct: 582 RDCDRAASAELIKEMRSSGFV 602
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++TYNSL++ LC ++ + P++ T+N L+D K G+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A+++ +++ + TY ++ING C DEA + M + C PN T+ +
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + + +L EM +GL+
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLV 430
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T +SLL+ C S + + G +PD T+ L+ GL + +A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ +G + TY ++NGLCK G D AL LL+KME N + F +II S
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + + A L EM KG+
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGI 289
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G ++ TY+ ++ C+ + G +PD+ T + L++G C + R
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA + ++ GY T+T +I+GL EA+AL+ +M GC P+ +T+ +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 IIRSLFENGENDKAEKLLLEM 141
++ L + G+ D A LL +M
Sbjct: 229 VVNGLCKRGDIDLALNLLNKM 249
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 3 VKGQP-ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
VK +P +I+ +N LL A+ K + + G+ DL TY+I ++ C+ +L
Sbjct: 75 VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A + ++ GY + T + ++NG C +A+AL+ +M G P+ TF ++
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
I LF + + +A L+ +M+ +G
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRG 218
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N +TY +++ ++ D V D+ TY+IL+ GLC G+
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A IF L + + Y MI G+CK G EA L + I+ P+ +T+ +
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNT 540
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L +A+ L +M + G L
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTL 567
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+ ITYN L++ C + +D + P++ TYN L++G CK R++D E+F
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TYT +I G + G D A + +M + +T+ ++ L
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 129 GENDKA 134
G+ D A
Sbjct: 482 GKLDTA 487
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
NI TYN+L++ CK V+ +G+ + TY ++ G +AG AQ +F
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ + TY+++++GLC G D AL + ++ N + ++I + +
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 129 GENDKAEKLL 138
G+ +A L
Sbjct: 517 GKVGEAWDLF 526
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
NI YN++++ +CK+ V ++PD+ TYN ++ GLC L++A ++F
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ G TY +I ++ + L+ +M G +A T S++ ++ +
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHD 617
Query: 129 GENDKA 134
G DK+
Sbjct: 618 GRLDKS 623
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 85.1 bits (209), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 62/106 (58%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G+ P + Y L+DG +G L A+E+F ++ +KG V TY MI GLC G F EA
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
LL +ME GC PN + + +++ L + G+ +A K++ EM+ KG
Sbjct: 779 CWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M VKGQ N+ TYNS++ LC + +G P+ Y+ L+ L KAG+
Sbjct: 750 MTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGK 809
Query: 61 LKDAQEIFHDLLIKGYHI 78
L +A+++ +++ KG+++
Sbjct: 810 LSEARKVIKEMVKKGHYV 827
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 84.0 bits (206), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+I + SL+D LCK + G +P++ T+ L+DGLCK G + A
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 65 QEIFHDLLIKG-YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+F L+ Y VHTYT MI G CKE + A L S+M+ +G PN T+ ++I
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 124 SLFENGENDKAEKLLLEMIDKGLLEKL 150
+ G +A +L+ M D+G + +
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNI 428
Score = 82.4 bits (202), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 73/142 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G A+ +TY L+ CK + ++ G + D+ NIL+ C+ ++K++
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ +F ++ G T TYT MI+ CKEG D AL M+ GC P++ T+ S+I
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + D+A KL MID+GL
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGL 599
Score = 77.0 bits (188), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Query: 16 LLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKG 75
+L ALC++ V+ D G +P+L + L+DGLCK G +K A E+ +++ G
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 76 YHITVHTYTVMINGLCKEGLFDEALALLSKM-EIEGCTPNAITFESIIRSLFENGENDKA 134
+ V+T+T +I+GLCK G ++A L K+ + PN T+ S+I + + ++A
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Query: 135 EKLLLEMIDKGLL 147
E L M ++GL
Sbjct: 378 EMLFSRMKEQGLF 390
Score = 72.8 bits (177), Expect = 9e-14, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGV-QPDLCTYNILMDGLCKAGRLKD 63
G N+ T+ +L+D LCK + +P++ TY ++ G CK +L
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+ +F + +G V+TYT +ING CK G F A L++ M EG PN T+ + I
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
SL + +A +LL + GL
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGL 459
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 67/138 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ TY S++ CK ++ +QG+ P++ TY L++G CKAG A E+
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM 416
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ + +G+ ++TY I+ LCK+ EA LL+K G + +T+ +I+ +
Sbjct: 417 NLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQ 476
Query: 129 GENDKAEKLLLEMIDKGL 146
+ ++A M G
Sbjct: 477 NDINQALAFFCRMNKTGF 494
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 67/147 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N+ TY +L++ CK+ D+G P++ TYN +D LCK R
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A E+ + G TYT++I CK+ ++ALA +M G +
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNI 503
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + + ++E+L ++ GL+
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLI 530
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + IT N +L+ + ++ +GV PD +Y +++ G + G+
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A ++ +G+ T T+++ LC+ GL + A+ KM G PN I F S
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I L + G +A ++L EM+ G
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNG 317
Score = 59.7 bits (143), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 56/104 (53%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
+G PD T +++ LC+ G + A F ++ G+ + +T +I+GLCK+G +
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 305
Query: 99 ALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMI 142
A +L +M G PN T ++I L + G +KA +L L+++
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M+ G A++ N L+ A C+ + G+ P TY ++ CK G
Sbjct: 489 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 548
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A + FH++ G TY +I+GLCK+ + DEA L M G +P +T +
Sbjct: 549 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 608
Query: 121 IIRSLFENGENDKAEKL-LLEMIDKGL 146
+ + ND A + LLE +DK L
Sbjct: 609 LAYEYCK--RNDSANAMILLEPLDKKL 633
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
+QG+ P T N +++ + G ++ A+ +F ++ ++G +Y +M+ G ++G
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
EA L+ M G P+ T I+ +L ENG ++A +MID G L
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNL 287
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ YN LL++ K V+ G+ P T+N+L+ LC + + A+E+F
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG T+ +++ G CK GL D+ L LL+ ME G PN + + +I+ S
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCRE 230
Query: 129 GENDKAEKLLLEMIDKGLL 147
G ND +EK++ +M ++GL+
Sbjct: 231 GRNDDSEKMVEKMREEGLV 249
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A++ +YN L L + D+G+ P + +YNILMDGLCK G L DA+ I
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+ G TY +++G C G D A +LL +M C PNA T ++ SL++
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 128 NGENDKAEKLLLEMIDKG 145
G +AE+LL +M +KG
Sbjct: 444 MGRISEAEELLRKMNEKG 461
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ITY++LL+ LCK+ + +QPD YNI + CK G++ A +
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
D+ KG H ++ TY +I GL + E L+ +M+ +G +PN T+ + I+ L E
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 129 GENDKAEKLLLEMIDKGL 146
+ + A LL EM+ K +
Sbjct: 643 EKVEDATNLLDEMMQKNI 660
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N ITYN +L CK ++ + L +YNI + GL + G+ +A+ +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ KG ++++Y ++++GLCK G+ +A ++ M+ G P+A+T+ ++
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 129 GENDKAEKLLLEMI 142
G+ D A+ LL EM+
Sbjct: 410 GKVDAAKSLLQEMM 423
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G T+N L+ ALC S VD ++G +P+ T+ IL+ G CKAG
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ + + G Y +++ C+EG D++ ++ KM EG P+ +TF S I +
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 125 LFENGENDKAEKLLLEM 141
L + G+ A ++ +M
Sbjct: 262 LCKEGKVLDASRIFSDM 278
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQ------------------ 42
M+ KG + +T N ++D LC S +D G
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 43 -----PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
PDL TY+ L++GLCKAGR +A+ +F +++ + Y + I+ CK+G
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKIS 576
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
A +L ME +GC + T+ S+I L + + L+ EM +KG+
Sbjct: 577 SAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + +TY LL C VD P+ T NIL+ L K GR
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG---------- 110
+ +A+E+ + KGY + T ++++GLC G D+A+ ++ M + G
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 111 -------------CTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
C P+ IT+ +++ L + G +A+ L EM+ + L
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 15 SLLDALCKSHHVDXXXXXXXXXXDQGVQ--PDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
S++ KS+H+D + + P + YN+L++ K R++ ++ D++
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
+ G +T+ ++I LC D A L +M +GC PN TF ++R + G D
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 133 KAEKLLLEMIDKGLL 147
K +LL M G+L
Sbjct: 200 KGLELLNAMESFGVL 214
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 23/160 (14%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N T N LL +L K + ++G D T NI++DGLC +G L A EI
Sbjct: 430 NAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 69 HDLLIKGYHITVH-----------------------TYTVMINGLCKEGLFDEALALLSK 105
+ + G + TY+ ++NGLCK G F EA L ++
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAE 549
Query: 106 MEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
M E P+++ + I + G+ A ++L +M KG
Sbjct: 550 MMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N T+ L+ CK+ D GV P+ YN ++ C+ GR
Sbjct: 173 MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGR 232
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG----CTPNAI 116
D++++ + +G + T+ I+ LCKEG +A + S ME++ PN+I
Sbjct: 233 NDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSI 292
Query: 117 TFESIIRSLFENGENDKAEKLL 138
T+ +++ + G + A+ L
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLF 314
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++ TYNSL+ L + + ++G+ P++CTYN + LC+ +
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++DA + +++ K V ++ +I CK FD A + + + C +
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSL 703
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+ L G+ KA +LL ++D+G
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGF 729
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+H+ G I TYN LLDALCKS H D + V+P+L TYNIL++GLCK+ R
Sbjct: 145 IHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRR 203
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ + +L GY TYT M+ K ++ L L KM+ EG T + +
Sbjct: 204 VGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCA 263
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
++ +L + G ++A + + E++ G
Sbjct: 264 VVSALIKTGRAEEAYECMHELVRSG 288
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 37/181 (20%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCT------------- 47
M G ++ TYNSL+ K+ ++ G+ PD+ +
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 48 -----------------------YNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYT 84
YNIL+D LCK+G +A E+F L + + TY
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYN 192
Query: 85 VMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
++INGLCK ++ +++ G TPNA+T+ ++++ F+ +K +L L+M +
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 145 G 145
G
Sbjct: 253 G 253
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
+ +I++YN+LL+ K ++D +G++PD T+ I+++GL G A+
Sbjct: 290 RSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAE 349
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+ + G +V T +I+GLCK G D A+ L + ME+ + T+ S++ +L
Sbjct: 350 KHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNL 405
Query: 126 FENGENDKAEKLLLEMIDKGL 146
++G A KLLL +KG+
Sbjct: 406 CKDGRLVCASKLLLSCYNKGM 426
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ITYN+L+ + +D + G++PD+ TYN L+ G K L
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSK-MEIEGCTPNAITFESIIR 123
++F ++L G + +Y +++ K G EA +L + + + G P T+ ++
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 124 SLFENGENDKAEKLL 138
+L ++G D A +L
Sbjct: 163 ALCKSGHTDNAIELF 177
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 2 HVKGQ-PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
H+K + ++TYN L++ LCKS V G P+ TY ++ K R
Sbjct: 179 HLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKR 238
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGC-TPNAITFE 119
++ ++F + +GY +++ L K G +EA + ++ G + + +++
Sbjct: 239 IEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYN 298
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGL 146
+++ F++G D + LL E+ KGL
Sbjct: 299 TLLNLYFKDGNLDAVDDLLEEIEMKGL 325
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
N +++LCK +++ GV PD+ TYN L+ G + + +A + +
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDK 133
G V TY +I+G K + + L L +M G +P+ ++ +++ F+ G + +
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 134 AEKLLLEMI 142
A K+L E I
Sbjct: 137 AFKILHEDI 145
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 83.6 bits (205), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 73/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++TY SL+ A + + + G+ PD Y ++D LCK+G
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A +F+D++ +Y +I+GLC+ G EA+ L M+ + C P+ +TF+
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
II L + A K+ +M+DKG
Sbjct: 471 IIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 73.9 bits (180), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 36/182 (19%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +I +N LD LC+ + V +G +PD+ +Y IL++GL +AG+
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 61 LKDAQEIFHDLL----------------------------------IKGYHITVHT--YT 84
+ DA EI++ ++ IK + + T Y
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 85 VMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
+I+G CK G ++A AL S M GC P+ +T+ ++ ++N +AE ++ EM+
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 145 GL 146
G+
Sbjct: 285 GI 286
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
+YN LL C+ H D + D+ +Y+ L++ C+A + A +F ++
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
KG + V TYT +I +EG A LL +M G +P+ I + +I+ L ++G
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNV 411
Query: 132 DKAEKLLLEMID 143
DKA + +MI+
Sbjct: 412 DKAYGVFNDMIE 423
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 35/171 (20%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+ YN+L+ CK+ ++ G +PDL TYN+L++ LK A+ + +
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 71 LLIKGYHITVH-----------------------------------TYTVMINGLCKEGL 95
++ G + + +Y+ +I C+
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASN 340
Query: 96 FDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+A L +M +G N +T+ S+I++ G + A+KLL +M + GL
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGL 391
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 63/131 (48%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY+ + LCK D G PD+ +N+ +D LC+ ++ A + F +
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ +G V +YT++INGL + G +A+ + + M G +P+ +++ L +
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 132 DKAEKLLLEMI 142
D A +++ E I
Sbjct: 201 DLAYEMVAEEI 211
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 66/136 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++++Y++L++ C++ + +G+ ++ TY L+ + G A+++
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ G YT +++ LCK G D+A + + M TP+AI++ S+I L +
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 129 GENDKAEKLLLEMIDK 144
G +A KL +M K
Sbjct: 444 GRVTEAIKLFEDMKGK 459
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 56/135 (41%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+ Y S + L KS +D + YN + L + R + A+ I+ D
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ G+ + TY+ I+GLCK FD ALLS ME G P+ F + L +
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 131 NDKAEKLLLEMIDKG 145
A + M+ +G
Sbjct: 130 VGFAVQTFFCMVQRG 144
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 78/143 (54%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + +T+N +++ C++ V+ G P++ Y+ LM+G CK G++++
Sbjct: 262 EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQE 321
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A++ F ++ G + YT ++N C+ G DEA+ LL +M+ C + +T+ I+R
Sbjct: 322 AKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILR 381
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
L G +++A ++L + +G+
Sbjct: 382 GLSSEGRSEEALQMLDQWGSEGV 404
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Query: 9 NIITYNSLLDAL-CKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
N ITY++L+D L S + +G+ PD T+N++++G C+AG ++ A++I
Sbjct: 231 NSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKI 290
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+ G + V+ Y+ ++NG CK G EA +++ G + + + +++
Sbjct: 291 LDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR 350
Query: 128 NGENDKAEKLLLEM 141
NGE D+A KLL EM
Sbjct: 351 NGETDEAMKLLGEM 364
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 2 HVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQ-PDLCTYNILMDGLCKAGR 60
H G N +N L+ CK+ ++ G+ P+ TY+ LMD L R
Sbjct: 188 HNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSR 247
Query: 61 LKDAQEIFHDLLIK-GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
K+A E+F D++ K G T+ VMING C+ G + A +L M+ GC PN +
Sbjct: 248 SKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYS 307
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGL 146
+++ + G+ +A++ E+ GL
Sbjct: 308 ALMNGFCKVGKIQEAKQTFDEVKKTGL 334
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + + Y +L++ C++ D + D TYN+++ GL GR ++A
Sbjct: 333 GLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ +G H+ +Y +++N LC G ++A+ LS M G P+ T+ ++
Sbjct: 393 LQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVR 452
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
L E+G + ++L+ + GL+
Sbjct: 453 LCESGYTEIGVRVLIGFLRIGLI 475
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N+ITY+SL+ LC ++ + P+L T++ L+D K G+
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A++++ +++ + + TY+ +ING C EA +L M + C PN +T+ +
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + DK +L EM +GL+
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLV 425
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G N+ TYN L++ C+ + G +PD+ T N L++G C R
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA + ++ GY T+T +I+GL EA+AL+ +M GC P+ +T+ +
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 121 IIRSLFENGENDKAEKLLLEM 141
++ L + G+ D A LL +M
Sbjct: 224 VVNGLCKRGDTDLALNLLNKM 244
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++TY ++++ LCK D ++ ++ Y+ ++D LCK
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
DA +F ++ KG V TY+ +I+ LC G + +A LLS M PN +TF +
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + G+ KAEKL EMI + +
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSI 354
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T NSLL+ C + + + G +PD T+ L+ GL + +A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ +G + TY ++NGLCK G D AL LL+KME N + + ++I S
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + D A L EM +KG+
Sbjct: 263 LCKYRHEDDALNLFTEMENKGV 284
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + +T+ +L+ L + +G QPDL TY +++GLCK G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + + V Y+ +I+ LCK D+AL L ++ME +G PN IT+ S+I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 125 LFENGENDKAEKLLLEMIDK 144
L G A +LL +MI++
Sbjct: 298 LCNYGRWSDASRLLSDMIER 317
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T+++L+DA K + + + P++ TY+ L++G C RL +A+++
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K V TY +ING CK D+ + L +M G N +T+ ++I F+
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 129 GENDKAEKLLLEMIDKGL 146
+ D A+ + +M+ G+
Sbjct: 442 RDCDNAQMVFKQMVSVGV 459
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N +TY +L+ ++ D GV P++ TYNIL+DGLCK G+
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEG 94
L A +F L ++TY +MI G+CK G
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 63/122 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++TYN+L++ CK+ VD +G+ + TY L+ G +A +AQ +F
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G H + TY ++++GLCK G +A+ + ++ P+ T+ +I + +
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Query: 129 GE 130
G+
Sbjct: 512 GK 513
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
NI TY+SL++ C + + P++ TYN L++G CKA R+ E+F
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G TYT +I+G + D A + +M G PN +T+ ++ L +N
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 129 GENDKAEKLLLEMIDKGLLE 148
G+ KA ++ E + + +E
Sbjct: 477 GKLAKA-MVVFEYLQRSTME 495
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+II ++ LL A+ K + D G+ +L TYNIL++ C+ RL A +
Sbjct: 77 SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALL 136
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ GY + T ++NG C +A+AL+ +M G P+ +TF ++I LF +
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 129 GENDKAEKLLLEMIDKG 145
+ +A L+ M+ +G
Sbjct: 197 NKASEAVALIDRMVQRG 213
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
G NI+TYN LLD LCK+ + ++PD+ TYNI+++G+CKAG+ K
Sbjct: 458 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +++T+ L+DALCK+ + DQG+ P+L TYN L+ GL + R
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L DA E+F ++ G T +TY V I+ K G AL KM+ +G PN + +
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+ SL + G + +A+++ + D GL+
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLV 500
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXX-XXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
AN IT+N ++ L K+ +VD D+ P CTY L+DGL K+GRL +A++
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 912
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+F +L G Y ++ING K G D A AL +M EG P+ T+ ++ L
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 127 ENGENDKAEKLLLEMIDKGL 146
G D+ E+ + GL
Sbjct: 973 MVGRVDEGLHYFKELKESGL 992
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + +TYN ++ K +D + G +PD+ N L++ L KA R+ +A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F + TV TY ++ GL K G EA+ L M +GC PN ITF ++
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 125 LFENGENDKAEKLLLEMIDKG 145
L +N E A K+L +M+D G
Sbjct: 618 LCKNDEVTLALKMLFKMMDMG 638
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G ++I NSL++ L K+ VD + ++P + TYN L+ GL K G+
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A E+F ++ KG T+ + + LCK AL +L KM GC P+ T+ +
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 121 IIRSLFENGENDKA 134
II L +NG+ +A
Sbjct: 649 IIFGLVKNGQVKEA 662
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N YN L++ K+ D +GV+PDL TY++L+D LC GR+ +
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEI-EGCTPNAITFESIIR 123
F +L G + V Y ++INGL K +EAL L ++M+ G TP+ T+ S+I
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+L G ++A K+ E+ GL
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGL 1063
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++ TY+ L+D LC VD + G+ PD+ YN++++GL K+ R
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 61 LKDAQEIFHDLLI-KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
L++A +F+++ +G ++TY +I L G+ +EA + ++++ G PN TF
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGL 146
++IR +G+ + A + M+ G
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+TY +LLD + +D G PD+ T+ IL+D LCKAG +A +
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ +G +HTY +I GL + D+AL L ME G P A T+ I ++G+
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 131 NDKAEKLLLEMIDKGL 146
+ A + +M KG+
Sbjct: 449 SVSALETFEKMKTKGI 464
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G TY +D KS +G+ P++ N + L KAGR
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++A++IF+ L G TY +M+ K G DEA+ LLS+M GC P+ I S
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+I +L++ D+A K+ + M
Sbjct: 544 LINTLYKADRVDEAWKMFMRM 564
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY L+D L KS + D G +P+ YNIL++G KAG A +F +
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ +G + TY+V+++ LC G DE L +++ G P+ + + II L ++
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRL 1012
Query: 132 DKAEKLLLEM 141
++A L EM
Sbjct: 1013 EEALVLFNEM 1022
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 4/148 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG P N IT+N+L D LCK+ V D G PD+ TYN ++ GL K G+
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCT--PNAITF 118
+K+A FH + Y V T ++ G+ K L ++A +++ + C P + +
Sbjct: 659 VKEAMCFFHQMKKLVYPDFV-TLCTLLPGVVKASLIEDAYKIITNF-LYNCADQPANLFW 716
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDKGL 146
E +I S+ D A ++ G+
Sbjct: 717 EDLIGSILAEAGIDNAVSFSERLVANGI 744
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+ T+ + L ++ ++ D+G PD+ TY +L+D LC A +
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A+E+F + + TY +++ D S+ME +G P+ +TF
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
++ +L + G +A L M D+G+L L
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++TY L+DALC + +D +PD TY L+D
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L ++ + ++ G+ V T+T++++ LCK G F EA L M +G PN T+ +
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L D A +L M G+
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGV 429
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 36/182 (19%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMD----------- 53
G + TYN L+ L ++ ++ G PD+ TYN L+D
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 54 ------------------------GLCKAGRLKDAQEIFHDLLI-KGYHITVHTYTVMIN 88
GL KAG + DA ++++DL+ + + T TY +I+
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 89 GLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLE 148
GL K G EA L M GC PN + +I + GE D A L M+ +G+
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 149 KL 150
L
Sbjct: 960 DL 961
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M ++G ++ TY+SL+ L K +D G++P++ T+ I + L +AG+
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 273
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A EI + +G V TYTV+I+ LC D A + KM+ P+ +T+ +
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
++ +N + D ++ EM G
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDG 358
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
D GVQP L TYN+L+ GL +A ++ AQ++F + G V TY +++ K G D
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMI 142
E L +M C N IT +I L + G D A L +++
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXX-XXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
G +++ YN +++ L KSH ++ +G+ PDL TYN L+ L AG +++
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A +I++++ G V T+ +I G G + A A+ M G +PN T+E +
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%)
Query: 47 TYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM 106
+YN L+ L K+ +A E++ ++++G+ ++ TY+ ++ GL K D + LL +M
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 107 EIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
E G PN TF IR L G+ ++A ++L M D+G
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++TYN+LL L K+ + +G P+ T+N L D LCK + A ++
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME 107
++ G V TY +I GL K G EA+ +M+
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 83.2 bits (204), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 79/142 (55%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ T N +++ALCK ++ ++GV PD+ TYN L+ G +++A E+
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ + KG+ V+TY +INGLCK G ++ A + ++M G +P++ T+ S++ +
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 129 GENDKAEKLLLEMIDKGLLEKL 150
G+ + EK+ +M + ++ L
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDL 375
Score = 73.2 bits (178), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 73/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++TYN++L LCK + ++ + PD T IL+DG CK G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L++A E+F + K + V TY +++G K G D A + + M + P I++
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ +L G +A ++ EMI K +
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 69.7 bits (169), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P N+I Y L+ C+ + QG D+ TYN ++ GLCK L +A +
Sbjct: 408 PDNVI-YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+F+++ + +T T++I+G CK G A+ L KM+ + + +T+ +++
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 127 ENGENDKAEKLLLEMIDKGLL 147
+ G+ D A+++ +M+ K +L
Sbjct: 527 KVGDIDTAKEIWADMVSKEIL 547
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 69/144 (47%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG +I+TYN+L+ A ++ +G P + TYN +++GLCK G+ +
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+E+F ++L G TY ++ CK+G E + S M P+ + F S++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
+G DKA + + GL+
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLI 407
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 76/146 (52%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+ KG +I N+L+ +L + V+ GV ++ T NI+++ LCK G+
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ + KG + + TY +I+ +GL +EA L++ M +G +P T+ +
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L ++G+ ++A+++ EM+ GL
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGL 336
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 67/136 (49%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T L+D CK ++ ++ ++ D+ TYN L+DG K G + A+EI+ D+
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ K T +Y++++N LC +G EA + +M + P + S+I+ +G
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Query: 132 DKAEKLLLEMIDKGLL 147
E L +MI +G +
Sbjct: 602 SDGESFLEKMISEGFV 617
Score = 67.4 bits (163), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
I+Y+ L++ALC H+ + ++P + N ++ G C++G D +
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIE--GCTPNAITFESIIRSLFEN 128
++ +G+ +Y +I G +E +A L+ KME E G P+ T+ SI+
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 129 GENDKAEKLLLEMIDKGL 146
+ +AE +L +MI++G+
Sbjct: 671 NQMKEAEVVLRKMIERGV 688
Score = 67.0 bits (162), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 64/133 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++TYN+LLD K +D + + P +Y+IL++ LC G L +A ++
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ K TV MI G C+ G + + L KM EG P+ I++ ++I
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 129 GENDKAEKLLLEM 141
KA L+ +M
Sbjct: 634 ENMSKAFGLVKKM 646
Score = 62.8 bits (151), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 65/136 (47%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY SLL CK V + V PDL ++ +M ++G L A F+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G YT++I G C++G+ A+ L ++M +GC + +T+ +I+ L +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 132 DKAEKLLLEMIDKGLL 147
+A+KL EM ++ L
Sbjct: 462 GEADKLFNEMTERALF 477
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 68/136 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++ ++S++ +S ++D + G+ PD Y IL+ G C+ G + A +
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++L +G + V TY +++GLCK + EA L ++M P++ T +I +
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 129 GENDKAEKLLLEMIDK 144
G A +L +M +K
Sbjct: 494 GNLQNAMELFQKMKEK 509
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQ--GVQPDLCTYNILMDGLCKA 58
M +G + I+YN+L+ + ++ ++ G+ PD+ TYN ++ G C+
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 59 GRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPN 114
++K+A+ + ++ +G + TYT MING + EA + +M G +P+
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
++ NS++ C+S + +G PD +YN L+ G + + A +
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 70 DLLIK--GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+ + G V TY +++G C++ EA +L KM G P+ T+ +I
Sbjct: 645 KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVS 704
Query: 128 NGENDKAEKLLLEMIDKGL 146
+A ++ EM+ +G
Sbjct: 705 QDNLTEAFRIHDEMLQRGF 723
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 82.8 bits (203), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G ITY ++D LCK+ +D G+ PD+ TY+ L++G CK GR
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
K A+EI + G Y+ +I C+ G EA+ + M +EG T + TF
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ SL + G+ +AE+ + M G+L
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G I+TYN++L CK +GV D+CTYN+L+ LC++ R
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ + D+ + H TY +ING EG A LL++M G +PN +TF +
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I G +A K+ M KGL
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGL 404
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N +T+N+L+D + +G+ P +Y +L+DGLCK A
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + + G + TYT MI+GLCK G DEA+ LL++M +G P+ +T+ ++I
Sbjct: 428 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ G A++++ + GL
Sbjct: 488 FCKVGRFKTAKEIVCRIYRVGL 509
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG A++ TYN L+ LC+S+ + + + P+ TYN L++G G+
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A ++ +++L G T+ +I+G EG F EAL + ME +G TP+ +++
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ L +N E D A + M G+
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGV 439
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + ++Y LLD LCK+ D GV TY ++DGLCK G
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A + +++ G + TY+ +ING CK G F A ++ ++ G +PN I + +
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I + G +A ++ MI +G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEG 543
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ T+N L++ LC + G P + TYN ++ CK GR K A E+
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ KG V TY ++I+ LC+ + LL M PN +T+ ++I
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 351
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ A +LL EM+ GL
Sbjct: 352 GKVLIASQLLNEMLSFGL 369
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M ++G + T+N L+ +LCK+ V G+ P+ +++ L++G +G
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A +F ++ G+H T TY ++ GLCK G EA L + + + + +
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ ++ ++G KA L EM+ + +L
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G TY SLL LCK H+ D YN L+ +CK+G L A
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAITFESIIR 123
+F +++ + +TYT +I+GLC++G A+ + E G PN + + +
Sbjct: 673 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 732
Query: 124 SLFENGE 130
+F+ G+
Sbjct: 733 GMFKAGQ 739
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G ++ T N++L ++ KS + + PD+ T+NIL++ LC G
Sbjct: 189 MGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGS 248
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ + + + GY T+ TY +++ CK+G F A+ LL M+ +G + T+
Sbjct: 249 FEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNM 308
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+I L + K LL +M
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDM 329
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+H + + YN+LL A+CKS ++ + + PD TY L+ GLC+ G+
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Query: 61 LKDAQEIFHDLLIKGYHITVHT-YTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
A + +G + YT ++G+ K G + + +M+ G TP+ +T
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763
Query: 120 SIIRSLFENGENDKAEKLLLEM 141
++I G+ +K LL EM
Sbjct: 764 AMIDGYSRMGKIEKTNDLLPEM 785
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G P + T N ++ + K+G ++L + V T+ ++IN LC EG F+++
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
L+ KME G P +T+ +++ + G A +LL M KG+
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 299
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P N+ TYN LL K V G+ PD T + L+ G+C++ L+
Sbjct: 790 GGP-NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+I + +G + +T+ ++I+ C G + A L+ M G + + T ++++
Sbjct: 849 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 908
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L N ++ +L EM +G+
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGI 930
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P N+ ++++ AL K D + P + ++ LM CK G + +A E
Sbjct: 967 PPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 1025
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+ + G + + +Y V+I GLC +G A L +M+ +G NA T++++IR L
Sbjct: 1026 LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Query: 127 -ENGENDKAEKLLLEMIDKGLLEKL 150
A+ +L +++ +G + +
Sbjct: 1086 ARETAFSGADIILKDLLARGFITSM 1110
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T N+++D + ++ +Q P+L TYNIL+ G K + +
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813
Query: 65 QEIFHDLLIKGY---HITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
++ +++ G +T H+ ++ G+C+ + + L +L G + TF +
Sbjct: 814 FLLYRSIILNGILPDKLTCHS---LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 870
Query: 122 IRSLFENGENDKAEKLLLEMIDKGL 146
I NGE + A L+ M G+
Sbjct: 871 ISKCCANGEINWAFDLVKVMTSLGI 895
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 66/147 (44%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + T+N L+ C + ++ G+ D T + ++ L + R ++
Sbjct: 858 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 917
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
++ + H++ +G Y +INGLC+ G A + +M P + +++R
Sbjct: 918 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977
Query: 124 SLFENGENDKAEKLLLEMIDKGLLEKL 150
+L + G+ D+A LL M+ L+ +
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTI 1004
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 82.8 bits (203), Expect = 9e-17, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T+N+L++ CK+ VD PD+ TYN ++DGLC+AG++K A + +
Sbjct: 211 TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGM 270
Query: 72 LIKG--YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
L K H V +YT ++ G C + DEA+ + M G PNA+T+ ++I+ L E
Sbjct: 271 LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH 330
Query: 130 ENDKAEKLLL 139
D+ + +L+
Sbjct: 331 RYDEIKDILI 340
Score = 78.2 bits (191), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXD--QGVQPDLCTYNILMDGLCKA 58
M +G N +TYN+L+ L ++H D D PD CT+NIL+ C A
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 59 GRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM---EI----EGC 111
G L A ++F ++L H +Y+V+I LC FD A L +++ E+ + C
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426
Query: 112 TPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
P A + + L NG+ +AEK+ +++ +G+
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV 461
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYT--VMINGLCKEGLFD 97
G+ P + T+N L+ L K GR A ++F D + + Y +T +YT +ING CK + D
Sbjct: 168 GISPSVLTFNSLLSILLKRGRTGMAHDLF-DEMRRTYGVTPDSYTFNTLINGFCKNSMVD 226
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
EA + ME+ C P+ +T+ +II L G+ A +L M+ K
Sbjct: 227 EAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA 274
Score = 65.9 bits (159), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQG--VQPDLCTYNILMDGLCKAGRLKDAQE 66
+++TYN+++D LC++ V + V P++ +Y L+ G C + +A
Sbjct: 243 DVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVL 302
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL--SKMEIEGCTPNAITFESIIRS 124
+FHD+L +G TY +I GL + +DE +L P+A TF +I++
Sbjct: 303 VFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKA 362
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ G D A K+ EM++ L
Sbjct: 363 HCDAGHLDAAMKVFQEMLNMKL 384
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+++Y +L+ C +D +G++P+ TYN L+ GL +A R + +
Sbjct: 280 NVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIK--- 336
Query: 69 HDLLIKG------YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
D+LI G + T+ ++I C G D A+ + +M P++ ++ +I
Sbjct: 337 -DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLI 395
Query: 123 RSLFENGENDKAEKLLLEMIDKGLL 147
R+L E D+AE L E+ +K +L
Sbjct: 396 RTLCMRNEFDRAETLFNELFEKEVL 420
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 59/139 (42%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
+Y +L+ C+ + PDL TY +L+DGL K G A + +
Sbjct: 466 SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM 525
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
L Y T+ ++ L K +E+ L++ M + N ++R LF + +
Sbjct: 526 LRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQK 585
Query: 132 DKAEKLLLEMIDKGLLEKL 150
+KA ++ + D G L K+
Sbjct: 586 EKAFLIVRLLYDNGYLVKM 604
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 82.4 bits (202), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 69/142 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P N+ +N L++ CK ++ + +QP + ++N L++G CK G L +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ H + V TY+ +IN LCKE D A L +M G PN + F ++I
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
NGE D ++ +M+ KGL
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGL 376
Score = 77.8 bits (190), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 75/144 (52%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + ITY +L+D C+ V+ G++ D ++ L+ G+CK GR+ D
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+ ++L G TYT+M++ CK+G LL +M+ +G P+ +T+ ++
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLN 528
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
L + G+ A+ LL M++ G++
Sbjct: 529 GLCKLGQMKNADMLLDAMLNIGVV 552
Score = 75.9 bits (185), Expect = 9e-15, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 67/133 (50%)
Query: 15 SLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIK 74
+LLD + K + D G ++ +NILM+ CK G + DAQ++F ++ +
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 75 GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKA 134
TV ++ +ING CK G DE L +ME P+ T+ ++I +L + + D A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 135 EKLLLEMIDKGLL 147
L EM +GL+
Sbjct: 330 HGLFDEMCKRGLI 342
Score = 72.8 bits (177), Expect = 8e-14, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 73/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N + + +L+ ++ +D +G+QPD+ YN L++G CK G
Sbjct: 336 MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A+ I ++ +G TYT +I+G C+ G + AL + +M+ G + + F +
Sbjct: 396 LVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSA 455
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + + G AE+ L EM+ G+
Sbjct: 456 LVCGMCKEGRVIDAERALREMLRAGI 481
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + + +++L+ +CK V G++PD TY ++MD CK G
Sbjct: 441 MDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ ++ ++ G+ +V TY V++NGLCK G A LL M G P+ IT+ +
Sbjct: 501 AQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNT 560
Query: 121 IIRSLFENGENDK 133
++ + + K
Sbjct: 561 LLEGHHRHANSSK 573
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP ++++N+L++ CK ++D +PD+ TY+ L++ LCK ++ A
Sbjct: 272 QPT-VVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+F ++ +G +T +I+G + G D KM +G P+ + + +++
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 126 FENGENDKAEKLLLEMIDKGL 146
+NG+ A ++ MI +GL
Sbjct: 391 CKNGDLVAARNIVDGMIRRGL 411
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGV-QPDLCTYNILMDGLCKAGRLKD 63
G +I+TYN+L+ CKS+ ++ V PD+ TY ++ G CKAG++++
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + D+L G + T T+ V+++G K G A + KM GC P+ +TF S+I
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
G+ + +L EM +G+
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMF 379
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++TY S++ CK+ + G+ P T+N+L+DG KAG + A+EI
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G V T+T +I+G C+ G + L +M G PNA T+ +I +L
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 129 GENDKAEKLLLEMIDKGLLEK 149
KA +LL ++ K ++ +
Sbjct: 396 NRLLKARELLGQLASKDIIPQ 416
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M+ +G N TY+ L++ALC + + + + P YN ++DG CKAG+
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A I ++ K T+T++I G C +G EA+++ KM GC+P+ IT S
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 121 IIRSLFENGENDKAEKL 137
++ L + G +A L
Sbjct: 493 LLSCLLKAGMAKEAYHL 509
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++T+ SL+D C+ V +G+ P+ TY+IL++ LC RL A+E+
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
L K Y +I+G CK G +EA ++ +ME + C P+ ITF +I
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 129 GENDKAEKLLLEMIDKG 145
G +A + +M+ G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P N+ T+N L+D K+ + G PD+ T+ L+DG C+ G++
Sbjct: 310 PTNV-TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFR 368
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
++ ++ +G TY+++IN LC E +A LL ++ + P + +I
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 127 ENGENDKAEKLLLEMIDK 144
+ G+ ++A ++ EM K
Sbjct: 429 KAGKVNEANVIVEEMEKK 446
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
NSLL+ L K V+ D T+NIL+ GLC G+ + A E+ +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAITFESIIRSLFENGEND 132
G + TY +I G CK ++A + ++ C+P+ +T+ S+I + G+
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 133 KAEKLLLEMIDKGL 146
+A LL +M+ G+
Sbjct: 295 EASSLLDDMLRLGI 308
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGV-QPDLCTYNILMDGLCKAGRLKD 63
G +I+TYN+L+ CKS+ ++ V PD+ TY ++ G CKAG++++
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + D+L G + T T+ V+++G K G A + KM GC P+ +TF S+I
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
G+ + +L EM +G+
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMF 379
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++TY S++ CK+ + G+ P T+N+L+DG KAG + A+EI
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G V T+T +I+G C+ G + L +M G PNA T+ +I +L
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 129 GENDKAEKLLLEMIDKGLLEK 149
KA +LL ++ K ++ +
Sbjct: 396 NRLLKARELLGQLASKDIIPQ 416
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M+ +G N TY+ L++ALC + + + + P YN ++DG CKAG+
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A I ++ K T+T++I G C +G EA+++ KM GC+P+ IT S
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 121 IIRSLFENGENDKAEKL 137
++ L + G +A L
Sbjct: 493 LLSCLLKAGMAKEAYHL 509
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++T+ SL+D C+ V +G+ P+ TY+IL++ LC RL A+E+
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
L K Y +I+G CK G +EA ++ +ME + C P+ ITF +I
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 129 GENDKAEKLLLEMIDKG 145
G +A + +M+ G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P N+ T+N L+D K+ + G PD+ T+ L+DG C+ G++
Sbjct: 310 PTNV-TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFR 368
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
++ ++ +G TY+++IN LC E +A LL ++ + P + +I
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 127 ENGENDKAEKLLLEMIDK 144
+ G+ ++A ++ EM K
Sbjct: 429 KAGKVNEANVIVEEMEKK 446
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
NSLL+ L K V+ D T+NIL+ GLC G+ + A E+ +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAITFESIIRSLFENGEND 132
G + TY +I G CK ++A + ++ C+P+ +T+ S+I + G+
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 133 KAEKLLLEMIDKGL 146
+A LL +M+ G+
Sbjct: 295 EASSLLDDMLRLGI 308
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 81.6 bits (200), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 74/143 (51%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
+ G N +YN L+ A C + + ++ V PD+ +Y IL+ G C+ G++
Sbjct: 183 LHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVN 242
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
A E+ D+L KG+ +YT ++N LC++ EA LL +M+++GC P+ + + ++I
Sbjct: 243 GAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMI 302
Query: 123 RSLFENGENDKAEKLLLEMIDKG 145
A K+L +M+ G
Sbjct: 303 LGFCREDRAMDARKVLDDMLSNG 325
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 66/131 (50%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG + ++Y +LL++LC+ + +G PDL YN ++ G C+ R D
Sbjct: 254 KGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMD 313
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+++ D+L G +Y +I GLC +G+FDE L +M +G +P+ +++
Sbjct: 314 ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVK 373
Query: 124 SLFENGENDKA 134
G+ ++A
Sbjct: 374 GFCSFGKVEEA 384
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG +++ YN+++ C+ G P+ +Y L+ GLC G
Sbjct: 286 MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGM 345
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ ++ +++ KG+ ++ G C G +EA ++ + G T ++ T+E
Sbjct: 346 FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 405
Query: 121 IIRSLFENGENDKAEKLLLE 140
+I + E++K KL LE
Sbjct: 406 VIPLICNEDESEKI-KLFLE 424
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 78/146 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N++T+N+++D L D ++G++P L TY+IL+ GL +A R
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA + ++ KG+ V Y +I+ + G ++A+ + M +G + + T+ +
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I+ +NG+ D AE+LL EM+ G
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGF 431
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 79/147 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG P N+I YN+L+D+ ++ ++ +G+ TYN L+ G CK G+
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A+ + ++L G+++ ++T +I LC +FD AL + +M + +P +
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L ++G++ KA +L + ++KG +
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFV 502
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG ++ + + ++A CK V+ + GV P++ T+N ++DGL GR +
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A ++ +G T+ TY++++ GL + +A +L +M +G PN I + ++I
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
S E G +KA ++ M+ KGL
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGL 396
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M K N + YN L+ A C+S + +G+ P+ TY L+ G+ R
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A+ +F ++ ++G V YT +I+G K G + LL +M + PN IT+
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I +G +A +LL EM +KG++
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ TY+ ++D CK+ + + VQP+ YN L+ C++GRL A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ D+ KG TYT +I G+ +EA L +M +EG PN + ++I
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ G+ K E LL EM K +
Sbjct: 725 YGKLGQMVKVECLLREMHSKNV 746
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + TY+ L+ L + V+ G+ PD+ TY++++DG CKA R
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ QE F +++ K Y +I C+ G AL L M+ +G +PN+ T+ S
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I+ + ++A+ L EM +GL
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGL 711
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
++G+ P T NIL+ L +A + E F D++ KG V+ +T IN CK G +
Sbjct: 219 NKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVE 277
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
EA+ L SKME G PN +TF ++I L G D+A +M+++G+
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + ++YN+L+ C +D +G++PD TY+IL+ GL ++++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + + D G V+TY+VMI+G CK +E +M + PN + + +IR
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ +G A +L +M KG+
Sbjct: 654 AYCRSGRLSMALELREDMKHKGI 676
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G +ITY+ L+ L ++ + +G P++ YN L+D +AG L
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A EI ++ KG +T TY +I G CK G D A LL +M G N +F S+I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
L + D A + + EM+ + +
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNM 466
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N TY SL+ + V+ +G++P++ Y L+DG K G+
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ + + ++ K H TYTVMI G ++G EA LL++M +G P++IT++
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 IIRSLFENG 129
I + G
Sbjct: 791 FIYGYLKQG 799
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N ++ S++ LC D + + P L+ GLCK G+ A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E++ L KG+ + T +++GLC+ G DEA + ++ GC + +++ ++I
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ D+A L EM+ +GL
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGL 571
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
+L+ LCK ++G D T N L+ GLC+AG+L +A I ++L
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDK 133
+G + +Y +I+G C + DEA L +M G P+ T+ +I LF + ++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 134 AEKLLLEMIDKGLL 147
A + + G+L
Sbjct: 594 AIQFWDDCKRNGML 607
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG + T N+LL LC++ +D +G D +YN L+ G C +L +
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +++ +G +TY+++I GL +EA+ + G P+ T+ +I
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ ++ ++ EM+ K +
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNV 641
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 78/146 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N++T+N+++D L D ++G++P L TY+IL+ GL +A R
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA + ++ KG+ V Y +I+ + G ++A+ + M +G + + T+ +
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I+ +NG+ D AE+LL EM+ G
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGF 431
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 79/147 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG P N+I YN+L+D+ ++ ++ +G+ TYN L+ G CK G+
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A+ + ++L G+++ ++T +I LC +FD AL + +M + +P +
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L ++G++ KA +L + ++KG +
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFV 502
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG ++ + + ++A CK V+ + GV P++ T+N ++DGL GR +
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A ++ +G T+ TY++++ GL + +A +L +M +G PN I + ++I
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
S E G +KA ++ M+ KGL
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGL 396
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M K N + YN L+ A C+S + +G+ P+ TY L+ G+ R
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A+ +F ++ ++G V YT +I+G K G + LL +M + PN IT+
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I +G +A +LL EM +KG++
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ TY+ ++D CK+ + + VQP+ YN L+ C++GRL A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ D+ KG TYT +I G+ +EA L +M +EG PN + ++I
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ G+ K E LL EM K +
Sbjct: 725 YGKLGQMVKVECLLREMHSKNV 746
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + TY+ L+ L + V+ G+ PD+ TY++++DG CKA R
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ QE F +++ K Y +I C+ G AL L M+ +G +PN+ T+ S
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I+ + ++A+ L EM +GL
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGL 711
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
++G+ P T NIL+ L +A + E F D++ KG V+ +T IN CK G +
Sbjct: 219 NKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVE 277
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
EA+ L SKME G PN +TF ++I L G D+A +M+++G+
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + ++YN+L+ C +D +G++PD TY+IL+ GL ++++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + + D G V+TY+VMI+G CK +E +M + PN + + +IR
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ +G A +L +M KG+
Sbjct: 654 AYCRSGRLSMALELREDMKHKGI 676
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G +ITY+ L+ L ++ + +G P++ YN L+D +AG L
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A EI ++ KG +T TY +I G CK G D A LL +M G N +F S+I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
L + D A + + EM+ + +
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNM 466
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N TY SL+ + V+ +G++P++ Y L+DG K G+
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ + + ++ K H TYTVMI G ++G EA LL++M +G P++IT++
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 IIRSLFENG 129
I + G
Sbjct: 791 FIYGYLKQG 799
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N ++ S++ LC D + + P L+ GLCK G+ A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E++ L KG+ + T +++GLC+ G DEA + ++ GC + +++ ++I
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ D+A L EM+ +GL
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGL 571
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
+L+ LCK ++G D T N L+ GLC+AG+L +A I ++L
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDK 133
+G + +Y +I+G C + DEA L +M G P+ T+ +I LF + ++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 134 AEKLLLEMIDKGLL 147
A + + G+L
Sbjct: 594 AIQFWDDCKRNGML 607
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG + T N+LL LC++ +D +G D +YN L+ G C +L +
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +++ +G +TY+++I GL +EA+ + G P+ T+ +I
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ ++ ++ EM+ K +
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNV 641
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N ++Y L+ A CKS D ++G +PD+ TY IL+ GL +G + D
Sbjct: 374 KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDD 433
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + L+ +G Y ++++GLCK G F A L S+M P+A + ++I
Sbjct: 434 AVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLID 493
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+G+ D+A K+ ++KG+
Sbjct: 494 GFIRSGDFDEARKVFSLSVEKGV 516
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 35/176 (19%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +I+TY L+ L S H+D D+GV PD YN+LM GLCK GR
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 61 LKDAQEIFHDLLI-----------------------------------KGYHITVHTYTV 85
A+ +F ++L KG + V +
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 86 MINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
MI G C+ G+ DEALA +++M E P+ T+ +II + + A K+ M
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG +++ +N+++ C+S +D ++ + PD TY+ ++DG K +
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +IF + V TYT +ING C +G F A +M++ PN +T+ ++IR
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIR 633
Query: 124 SL 125
SL
Sbjct: 634 SL 635
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 35/177 (19%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG NI+ YN+++ CK ++ +G P L T+ +++G CK G
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293
Query: 64 AQEIFHDLLIKGYHITVH-----------------------------------TYTVMIN 88
+ + ++ +G ++V TY ++IN
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILIN 353
Query: 89 GLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
LCKEG + A+ L + +G PN +++ +I++ ++ E D A KLLL+M ++G
Sbjct: 354 RLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 16 LLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKG 75
L+ +C V+ +G P++ YN ++ G CK G +++A +F +L +KG
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270
Query: 76 YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG-ENDKA 134
+ T+ T+ MING CKEG F + LLS+++ G + +II + + +G + D A
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330
Query: 135 EKL 137
E +
Sbjct: 331 ESI 333
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
+PD+ TYNIL++ LCK G+ + A + KG +Y +I CK +D A
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 102 LLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
LL +M GC P+ +T+ +I L +G D A + +++ID+G+
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++I NSLL L KS + D+G D + IL+ G+C G+++ +++
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLI 228
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
KG + Y +I G CK G + A + +++++G P TF ++I +
Sbjct: 229 EGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKE 288
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ +++LL E+ ++GL
Sbjct: 289 GDFVASDRLLSEVKERGL 306
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
TY++++D K + +P++ TY L++G C G K A+E F +
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615
Query: 71 LLIKGYHITVHTYTVMINGLCKE-GLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+ ++ V TYT +I L KE ++A+ M C PN +TF +++
Sbjct: 616 MQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 57/108 (52%)
Query: 43 PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL 102
PD+ N L+ L K+ RL DA++++ ++ +G + ++ +++ G+C EG + L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 103 LSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
+ +GC PN + + +II + G+ + A + E+ KG + L
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTL 275
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 80.1 bits (196), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 70/115 (60%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+II+YNSL++ L K+ VD ++G+ PD+ TY+ LM+ K R++ A +F
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLF 570
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
++L+KG + TY ++++ L K G EA+ L SKM+ +G TP++IT+ + R
Sbjct: 571 EEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 71/146 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +I TYN L+ + + VD +PD+ +YN L++ L K G
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A F ++ KG + V TY+ ++ K + A +L +M ++GC PN +T+
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ L +NG +A L +M +GL
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGL 613
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
+Y S+L++LC + ++GV D YN + L K ++ ++F +
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G + TY ++I + G DEA+ + ++E C P+ I++ S+I L +NG+
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 132 DKAEKLLLEMIDKGL 146
D+A EM +KGL
Sbjct: 529 DEAHVRFKEMQEKGL 543
Score = 67.0 bits (162), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 67/145 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+H KG + + YN++ AL K + G PD+ TYNIL+ + G
Sbjct: 433 IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGE 492
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A IF +L + +Y +IN L K G DEA +M+ +G P+ +T+ +
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYST 552
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
++ + + A L EM+ KG
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKG 577
Score = 59.7 bits (143), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N TY LL A +S G + D+ YN+L+D L K + A ++F
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVF 258
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
D+ + +TYT+MI + + G DEA+ L ++M EG T N + + ++++ L +
Sbjct: 259 EDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG 318
Query: 129 GENDKAEKLLLEMIDKG 145
DKA ++ M++ G
Sbjct: 319 KMVDKAIQVFSRMVETG 335
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I YN LLDAL K + + + D TY I++ + + G+ +A
Sbjct: 233 GHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEA 289
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+F++++ +G + V Y ++ L K + D+A+ + S+M GC PN T+ ++
Sbjct: 290 VGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNL 349
Query: 125 LFENGE 130
L G+
Sbjct: 350 LVAEGQ 355
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +++TY++L++ K+ V+ +G QP++ TYNIL+D L K GR
Sbjct: 538 MQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGR 597
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVM 86
+A +++ + +G TYTV+
Sbjct: 598 TAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N++ YN+L+ L K VD + G +P+ TY++L++ L G+
Sbjct: 296 MITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L + I ++T Y+ ++ L K G EA L M ++ S
Sbjct: 356 LVRLDGVVE---ISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMS 412
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ SL G+ +A ++L ++ +KG++
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVV 439
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.1 bits (196), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G P N ITY +++ +L + G +PD YN L+ L +AGR
Sbjct: 285 MEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
Query: 61 LKDAQEIFH-DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAITF 118
L++A+ +F ++ G I TY MI C D+A+ LL +ME C P+ T+
Sbjct: 345 LEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDK 144
+ ++RS F+ G+ + KLL EM+ K
Sbjct: 405 QPLLRSCFKRGDVVEVGKLLKEMVTK 430
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N + N LLD LCK V+ + P+ T+NI + G CKA R+++A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEA 243
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ G+ V +YT +I C++ F + +LS+ME G PN+IT+ +I+ S
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 125 LFENGENDKAEKLLLEMIDKG 145
L E ++A ++ M G
Sbjct: 304 LNAQKEFEEALRVATRMKRSG 324
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.1 bits (196), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G P N ITY +++ +L + G +PD YN L+ L +AGR
Sbjct: 285 MEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
Query: 61 LKDAQEIFH-DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAITF 118
L++A+ +F ++ G I TY MI C D+A+ LL +ME C P+ T+
Sbjct: 345 LEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDK 144
+ ++RS F+ G+ + KLL EM+ K
Sbjct: 405 QPLLRSCFKRGDVVEVGKLLKEMVTK 430
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N + N LLD LCK V+ + P+ T+NI + G CKA R+++A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEA 243
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ G+ V +YT +I C++ F + +LS+ME G PN+IT+ +I+ S
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 125 LFENGENDKAEKLLLEMIDKG 145
L E ++A ++ M G
Sbjct: 304 LNAQKEFEEALRVATRMKRSG 324
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 67/107 (62%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
+ P + YN+L+DGLCK R+ DA+++F ++L + ++ TY +I+G CK G +++
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
+ +M+ + P+ ITF ++++ LF+ G + AE +L EM D G +
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+++Y +L++ LCK + D+GV P + YN+L+DG C G+
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++DA ++L KG + + TY +I+GL G EA LL ++ +G P+ T+ S
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I G + L EM G+
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGI 630
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG ++ TYN L+ + + D D G P++ +Y L++ LCK +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +AQ + D+ +G V Y ++I+G C +G ++A +M +G N +T+ +
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L G+ +AE LLLE+ KGL
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGL 595
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 79/148 (53%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
KG N + YN+++D C+ + QG++PD YN L+ C+ G ++
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+A++ + + +KG +V TY ++I G ++ FD+ +L +ME G PN +++ ++I
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 123 RSLFENGENDKAEKLLLEMIDKGLLEKL 150
L + + +A+ + +M D+G+ K+
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 73/139 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ITYN+L+D CK+ + + ++P L T+N L+ GL KAG ++DA+ +
Sbjct: 248 SLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G+ T++++ +G + AL + G NA T ++ +L +
Sbjct: 308 KEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367
Query: 129 GENDKAEKLLLEMIDKGLL 147
G+ +KAE++L + KGL+
Sbjct: 368 GKIEKAEEILGREMAKGLV 386
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + T++ L D + + D GV+ + T +IL++ LCK G+++ A
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+EI + KG Y MI+G C++G A + ME +G P+ + + +IR
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
E GE + AEK + +M KG+
Sbjct: 434 FCELGEMENAEKEVNKMKLKGV 455
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++IT+N+LL L K+ V+ D G PD T++IL DG + + A ++
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ G + +T ++++N LCKEG ++A +L + +G PN + + ++I
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 129 GE 130
G+
Sbjct: 403 GD 404
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ YN L+D LCK ++ + + P L TYN L+DG CKAG + + ++
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ ++ T+ ++ GL K G+ ++A +L +M+ G P+A TF + N
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 129 GENDKAEKLLLEMIDKGL 146
+ + A + +D G+
Sbjct: 333 EKAEAALGVYETAVDSGV 350
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + YN L+D C ++ +G++ +L TYN L+DGL G+
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A+++ ++ KG V TY +I+G G +AL +M+ G P T+
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639
Query: 121 II 122
+I
Sbjct: 640 LI 641
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N T + LL+ALCK ++ +G+ P+ YN ++DG C+ G L A
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + +G Y +I C+ G + A ++KM+++G +P+ T+ +I
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG 468
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
E DK +L EM D G +
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTM 491
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++TYN+L+D L + + +G++PD+ TYN L+ G AG
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ ++ ++ G T+ TY ++I+ KEG+ + L +M ++ P+ + +
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI-ELTERLFGEMSLK---PDLLVYNG 670
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ +G+ +KA L +MI+K +
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSI 696
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 79.3 bits (194), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 72/141 (51%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P N+ + SLL C+ + + G +PD+ Y L+ G AG++ DA +
Sbjct: 249 PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYD 308
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+ D+ +G+ + YTV+I LCK +EA+ + +ME C + +T+ +++
Sbjct: 309 LLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Query: 127 ENGENDKAEKLLLEMIDKGLL 147
+ G+ DK +L +MI KGL+
Sbjct: 369 KWGKIDKCYIVLDDMIKKGLM 389
Score = 59.7 bits (143), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 62/140 (44%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+++TY +L+ CK +D +G+ P TY +M K ++ E+
Sbjct: 355 ADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLEL 414
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+ YH + Y V+I CK G EA+ L ++ME G +P TF +I L
Sbjct: 415 MEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLAS 474
Query: 128 NGENDKAEKLLLEMIDKGLL 147
G +A EM+ +GL
Sbjct: 475 QGCLLEASDHFKEMVTRGLF 494
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G +PD + L+D LCK G +KDA ++F D+ ++ + + + +T ++ G C+ G EA
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEA 271
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+L +M G P+ + + +++ G+ A LL +M +G
Sbjct: 272 KYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGF 318
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 59/122 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M+ G +I+ Y +LL + + +G +P+ Y +L+ LCK R
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A ++F ++ V TYT +++G CK G D+ +L M +G P+ +T+
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 397
Query: 121 II 122
I+
Sbjct: 398 IM 399
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Query: 7 PANIITYNSLLDALCKSHHV-DXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
P NI+ YN + LCK+ + D PD TY IL+ G AG + A
Sbjct: 717 PNNIV-YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAF 775
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+ ++ +KG + TY +I GLCK G D A LL K+ +G TPNAIT+ ++I L
Sbjct: 776 TLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Query: 126 FENGENDKAEKLLLEMIDKGLLE 148
++G +A +L +MI+KGL+
Sbjct: 836 VKSGNVAEAMRLKEKMIEKGLVR 858
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N NSL++ CKS + D ++PD TYN L+DG C+AG + +A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ + K TV TY +++ G + G F + L+L M G + I+ +++ +
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
LF+ G+ ++A KL ++ +GLL
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLL 503
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N++TY SL+ CK ++ ++ + D Y +LMDG C+ G+
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++DA + +++ G +ING CK G EA + S+M P+ T+ +
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
++ G D+A KL +M K
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQK 430
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N++TYNSL++ V+ ++GV ++ TY L+ G CK G +++A
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ +F L K H Y V+++G C+ G +A+ + M G N S+I
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
++G+ +AE++ M D L
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSL 397
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G A+ I+ ++LL+AL K + +G+ D T N+++ GLCK ++ +
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+EI ++ I V TY + +G K G EA A+ ME +G P + ++I
Sbjct: 525 AKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
F+ +K L++E+ +GL
Sbjct: 585 GAFKYRHLNKVADLVIELRARGL 607
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + IT N ++ LCK V+ +P + TY L G K G LK+
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + + KG T+ Y +I+G K ++ L+ ++ G TP T+ ++I
Sbjct: 560 AFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALIT 619
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
G DKA EMI+KG+
Sbjct: 620 GWCNIGMIDKAYATCFEMIEKGI 642
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG NI+TYN+L+ LCK +VD +G+ P+ TYN L+DGL K+G
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN 840
Query: 61 LKDAQEIFHDLLIKG 75
+ +A + ++ KG
Sbjct: 841 VAEAMRLKEKMIEKG 855
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN+L+D C++ +VD + V P + TYNIL+ G + G D ++ +
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
L +G + + + ++ L K G F+EA+ L + G + IT +I L + +
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 132 DKAEKLL 138
++A+++L
Sbjct: 523 NEAKEIL 529
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
+PA + TY +L K ++ +G+ P + YN L+ G K L
Sbjct: 538 KPA-VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
++ +L +G TV TY +I G C G+ D+A A +M +G T N I SL
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656
Query: 126 FENGENDKAEKLLLEMIDKGLL 147
F + D+A LL +++D LL
Sbjct: 657 FRLDKIDEACLLLQKIVDFDLL 678
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG I YN+L+ K H++ +G+ P + TY L+ G C G
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM 106
+ A +++ KG + V+ + + N L + DEA LL K+
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKI 672
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 79.3 bits (194), Expect = 8e-16, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P N+ + SLL C+ + + G++PD+ + L+ G AG++ DA +
Sbjct: 233 PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD 292
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCK-EGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+ +D+ +G+ V+ YTV+I LC+ E DEA+ + +ME GC + +T+ ++I
Sbjct: 293 LMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGF 352
Query: 126 FENGENDKAEKLLLEMIDKGLL 147
+ G DK +L +M KG++
Sbjct: 353 CKWGMIDKGYSVLDDMRKKGVM 374
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 65/147 (44%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G A+I+TY +L+ CK +D +GV P TY +M K +
Sbjct: 333 MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQ 392
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ E+ + +G H + Y V+I CK G EA+ L ++ME G +P TF
Sbjct: 393 FEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVI 452
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I G +A EM+ +G+
Sbjct: 453 MINGFTSQGFLIEACNHFKEMVSRGIF 479
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKA-G 59
M G +I+ + +LL + + +G +P++ Y +L+ LC+
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
R+ +A +F ++ G + TYT +I+G CK G+ D+ ++L M +G P+ +T+
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 120 SIIRSLFENGENDKAEKL--LLEMIDK 144
I+ + ++K E+ LE+I+K
Sbjct: 382 QIMVA------HEKKEQFEECLELIEK 402
Score = 59.7 bits (143), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G++PD + L+D LCK G +K+A ++F D+ K + + +T ++ G C+EG EA
Sbjct: 197 GLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEA 255
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+L +M+ G P+ + F +++ G+ A L+ +M +G
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + +TY ++ A K + +G PDL YN+++ CK G
Sbjct: 368 MRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGE 427
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG--CTPNAITF 118
+K+A +++++ G V T+ +MING +G EA +M G P T
Sbjct: 428 VKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTL 487
Query: 119 ESIIRSLFENGENDKAEKL 137
+S++ +L + + + A+ +
Sbjct: 488 KSLLNNLVRDDKLEMAKDV 506
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 79.3 bits (194), Expect = 9e-16, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 71/137 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++TY LL+ C+ ++ DQG++PD+ +N++++GL ++ + DA ++F
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
H + KG V +YT+MI CK+ + A+ M G P+A + +I
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 129 GENDKAEKLLLEMIDKG 145
+ D +LL EM +KG
Sbjct: 417 KKLDTVYELLKEMQEKG 433
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T N LLD+L ++ + + P++ TY +L++G C+ L +A I++D+
Sbjct: 266 TINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ +G + + VM+ GL + +A+ L M+ +G PN ++ +IR +
Sbjct: 325 IDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 132 DKAEKLLLEMIDKGL 146
+ A + +M+D GL
Sbjct: 385 ETAIEYFDDMVDSGL 399
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 64/139 (46%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G +I+ +N +L+ L +S +G P++ +Y I++ CK ++
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A E F D++ G YT +I G + D LL +M+ +G P+ T+ ++I+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 124 SLFENGENDKAEKLLLEMI 142
+ + A ++ +MI
Sbjct: 447 LMANQKMPEHATRIYNKMI 465
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 62/146 (42%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N+ +Y ++ CK ++ D G+QPD Y L+ G +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L E+ ++ KG+ TY +I + + + + A + +KM P+ TF
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNM 478
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
I++S F + + EMI KG+
Sbjct: 479 IMKSYFMARNYEMGRAVWEEMIKKGI 504
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 59/137 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG P + TYN+L+ + + ++P + T+N++M A
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARN 488
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ + ++ +++ KG ++YTV+I GL EG EA L +M +G I +
Sbjct: 489 YEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Query: 121 IIRSLFENGENDKAEKL 137
G+ + E+L
Sbjct: 549 FAADFHRGGQPEIFEEL 565
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + +TYNS++D K +D D +PD+ TYN L++ CK G+
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L E + ++ G V +Y+ +++ CKEG+ +A+ M G PN T+ S
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I + + G A +L EM+ G+
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGV 433
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + TYN ++D +CK V+ +G+ PD TYN ++DG K GRL D
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
F ++ V TY +IN CK G L +M+ G PN +++ +++ +
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
+ G +A K ++M GL+
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLV 399
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N TY SL+DA CK ++ GV+ ++ TY L+DGLC A R
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K+A+E+F + G + +Y +I+G K D AL LL++++ G P+ + + +
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
I L + + A+ ++ EM + G+
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGI 538
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ITYN+L++ CK + G++P++ +Y+ L+D CK G ++ A + +
Sbjct: 331 DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
D+ G +TYT +I+ CK G +A L ++M G N +T+ ++I L +
Sbjct: 391 VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA 450
Query: 129 GENDKAEKLLLEMIDKGLLEKL 150
+AE+L +M G++ L
Sbjct: 451 ERMKEAEELFGKMDTAGVIPNL 472
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
N LL K D G +P + TYNI++D +CK G ++ A+ +F ++
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDK 133
+G TY MI+G K G D+ + +M+ C P+ IT+ ++I + G+
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 134 AEKLLLEMIDKGL 146
+ EM GL
Sbjct: 351 GLEFYREMKGNGL 363
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N++TY +L+D LC + + GV P+L +YN L+ G KA + A
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ ++L +G + Y I GLC + A ++++M+ G N++ + +++ +
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 125 LFENGENDKAEKLLLEM 141
F++G + LL EM
Sbjct: 552 YFKSGNPTEGLHLLDEM 568
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 8 ANIITYNSLLDALCKSHHVDXXX-XXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
++T+ L+D LCK+ V D G+Q + + ++DGLCK +++ A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+F ++ KG YT +++G K+G EALAL KM G + + + S++ L
Sbjct: 635 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLS 694
Query: 127 ENGENDKAEKLLLEMIDKGL 146
+ KA L EMI +G+
Sbjct: 695 HCNQLQKARSFLEEMIGEGI 714
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
V P + N L+ K G+ D + F D++ G TV TY +MI+ +CKEG + A
Sbjct: 223 VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMID 143
L +M+ G P+ +T+ S+I + G D EM D
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 36/183 (19%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+ +YN+L+ K+ ++D +G++PDL Y + GLC +
Sbjct: 463 MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Query: 61 LKDAQEIFHDL--------------LIKGY---------------------HITVHTYTV 85
++ A+ + +++ L+ Y +TV T+ V
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCV 582
Query: 86 MINGLCKEGLFDEALALLSKMEIE-GCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
+I+GLCK L +A+ +++ + G NA F ++I L ++ + + A L +M+ K
Sbjct: 583 LIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 642
Query: 145 GLL 147
GL+
Sbjct: 643 GLV 645
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G AN + +++D LCK + V+ +G+ PD Y LMDG K G + +A
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + G + + YT ++ GL +A + L +M EG P+ + S+++
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Query: 125 LFENGENDKAEKL 137
+E G D+A +L
Sbjct: 728 HYELGCIDEAVEL 740
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M+ G + +TYN L + D+G+ PD+ TY IL+ G C+ G
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 61 LKDAQEIFHDLLIKGYHI-TVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
+ + D+L +G+ + ++ +VM++GLCK G DEAL+L ++M+ +G +P+ + +
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L + G+ D A L EM DK +L
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY++++D LC+ ++ + + P + ++N +M G CK G + A+ F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
L G +V+++ ++INGLC G EAL L S M G P+++T+ + + G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 132 DKAEKLLLEMIDKGL 146
A +++ +M+DKGL
Sbjct: 309 SGAWEVIRDMLDKGL 323
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +++ Y+ ++ LCK D D+ + P+ T+ L+ GLC+ G
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A+ + L+ G + + Y ++I+G K G +EAL L + G TP+ TF S
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508
Query: 121 IIRSLFENGENDKAEKLL 138
+I + +A K+L
Sbjct: 509 LIYGYCKTQNIAEARKIL 526
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ T+NSL+ CK+ ++ G+ P + +Y LMD G K
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLC------------KEGLFDEALALLSKMEIEGCT 112
E+ ++ +G T TY+V+ GLC +E +F++ L ME EG
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 113 PNAITFESIIRSL 125
P+ IT+ +II+ L
Sbjct: 618 PDQITYNTIIQYL 630
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+II + +L LCK+ +D G+ PDL Y+I++ GLCK G+ A ++
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K T+ ++ GLC++G+ EA +LL + G T + + + +I ++
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 129 GENDKAEKLLLEMIDKGL 146
G ++A +L +I+ G+
Sbjct: 482 GCIEEALELFKVVIETGI 499
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G+ +I+ YN ++D KS ++ + G+ P + T+N L+ G CK + +A
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++I + + G +V +YT +++ G L +M+ EG P +T+ I +
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Query: 125 LFENGENDKAEKLLLEMI 142
L +++ +L E I
Sbjct: 583 LCRGWKHENCNHVLRERI 600
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N T+ +LL LC+ + G D+ YNI++DG K+G +++A E+F
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G +V T+ +I G CK EA +L +++ G P+ +++ +++ +
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 129 GENDKAEKLLLEMIDKGL 146
G ++L EM +G+
Sbjct: 552 GNTKSIDELRREMKAEGI 569
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G P + ITYN+++ LC+ H+ + + TYNIL+D LC G
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A + L + ++ YT +I C +G + A+ L ++ G + + +
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 730
Query: 121 IIRSL 125
+I L
Sbjct: 731 VINRL 735
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + A+ TYN L+D+LC ++ +Q V Y L+ C G
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
+ A ++FH LL +G+++++ Y+ +IN LC+ L +
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 1 MHVKGQPANIITYNSLLDALCKS------HHV------DXXXXXXXXXXDQGVQPDLCTY 48
M +G P +TY+ + LC+ +HV + +G+ PD TY
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITY 623
Query: 49 NILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEI 108
N ++ LC+ L A + + + TY ++I+ LC G +A + + ++
Sbjct: 624 NTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE 683
Query: 109 EGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+ + + + ++I++ G+ + A KL +++ +G
Sbjct: 684 QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M+ G + +TYN L + D+G+ PD+ TY IL+ G C+ G
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 61 LKDAQEIFHDLLIKGYHI-TVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
+ + D+L +G+ + ++ +VM++GLCK G DEAL+L ++M+ +G +P+ + +
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L + G+ D A L EM DK +L
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY++++D LC+ ++ + + P + ++N +M G CK G + A+ F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
L G +V+++ ++INGLC G EAL L S M G P+++T+ + + G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 132 DKAEKLLLEMIDKGL 146
A +++ +M+DKGL
Sbjct: 309 SGAWEVIRDMLDKGL 323
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +++ Y+ ++ LCK D D+ + P+ T+ L+ GLC+ G
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A+ + L+ G + + Y ++I+G K G +EAL L + G TP+ TF S
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508
Query: 121 IIRSLFENGENDKAEKLL 138
+I + +A K+L
Sbjct: 509 LIYGYCKTQNIAEARKIL 526
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ T+NSL+ CK+ ++ G+ P + +Y LMD G K
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLC------------KEGLFDEALALLSKMEIEGCT 112
E+ ++ +G T TY+V+ GLC +E +F++ L ME EG
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 113 PNAITFESIIRSL 125
P+ IT+ +II+ L
Sbjct: 618 PDQITYNTIIQYL 630
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+II + +L LCK+ +D G+ PDL Y+I++ GLCK G+ A ++
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K T+ ++ GLC++G+ EA +LL + G T + + + +I ++
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 129 GENDKAEKLLLEMIDKGL 146
G ++A +L +I+ G+
Sbjct: 482 GCIEEALELFKVVIETGI 499
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G+ +I+ YN ++D KS ++ + G+ P + T+N L+ G CK + +A
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++I + + G +V +YT +++ G L +M+ EG P +T+ I +
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Query: 125 LFENGENDKAEKLLLEMI 142
L +++ +L E I
Sbjct: 583 LCRGWKHENCNHVLRERI 600
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N T+ +LL LC+ + G D+ YNI++DG K+G +++A E+F
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G +V T+ +I G CK EA +L +++ G P+ +++ +++ +
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 129 GENDKAEKLLLEMIDKGL 146
G ++L EM +G+
Sbjct: 552 GNTKSIDELRREMKAEGI 569
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G P + ITYN+++ LC+ H+ + + TYNIL+D LC G
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A + L + ++ YT +I C +G + A+ L ++ G + + +
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 730
Query: 121 IIRSL 125
+I L
Sbjct: 731 VINRL 735
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + A+ TYN L+D+LC ++ +Q V Y L+ C G
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
+ A ++FH LL +G+++++ Y+ +IN LC+ L +
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 1 MHVKGQPANIITYNSLLDALCKS------HHV------DXXXXXXXXXXDQGVQPDLCTY 48
M +G P +TY+ + LC+ +HV + +G+ PD TY
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITY 623
Query: 49 NILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEI 108
N ++ LC+ L A + + + TY ++I+ LC G +A + + ++
Sbjct: 624 NTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE 683
Query: 109 EGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+ + + + ++I++ G+ + A KL +++ +G
Sbjct: 684 QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 78.2 bits (191), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+TYN+L+ L K H D ++G + D Y+ ++ LCK GR+ +A+++ ++
Sbjct: 384 VTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINE 443
Query: 71 LLIKGY-HITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
+L KG+ V TYT ++NG C+ G D+A LL M G PN +++ +++ + G
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 130 ENDKAEKLL 138
++ +A +++
Sbjct: 504 KSLEAREMM 512
Score = 76.3 bits (186), Expect = 7e-15, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHH-VDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAG 59
MH KG + ++Y +++ LCK V+ + G+ PD TYN L+ L K
Sbjct: 338 MHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHD 397
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAITF 118
+A D KG+ I Y+ +++ LCKEG EA L+++M +G C P+ +T+
Sbjct: 398 HADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTY 457
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDKG 145
+++ GE DKA+KLL M G
Sbjct: 458 TAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Score = 72.8 bits (177), Expect = 8e-14, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 71/141 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
MH G N ++Y +LL+ +C++ + P+ TY+++M GL + G+
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 539
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A ++ ++++KG+ +++ LC++G EA + + +GC N + F +
Sbjct: 540 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 599
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+I +N E D A +L +M
Sbjct: 600 VIHGFCQNDELDAALSVLDDM 620
Score = 69.7 bits (169), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQG-VQPDLCTYNILMDGLCKAGRLK 62
KG + + Y++++ ALCK + +G PD+ TY +++G C+ G +
Sbjct: 412 KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVD 471
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
A+++ + G+ +YT ++NG+C+ G EA +++ E +PN+IT+ I+
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIM 531
Query: 123 RSLFENGENDKAEKLLLEMIDKGLL 147
L G+ +A ++ EM+ KG
Sbjct: 532 HGLRREGKLSEACDVVREMVLKGFF 556
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N++ N+ +D +++ ++ G+ P++ TYN ++ G C R
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIE-GCTPNAITFE 119
+++A E+ D+ KG +Y ++ LCKE E L+ KM E G P+ +T+
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGL-LEKL 150
++I L ++ D+A L + +KG ++KL
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKL 419
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 66/144 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG + N LL +LC+ ++G ++ + ++ G C+
Sbjct: 550 MVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDE 609
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A + D+ + H V TYT +++ L K+G EA L+ KM +G P +T+ +
Sbjct: 610 LDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRT 669
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
+I + G+ D +L +MI +
Sbjct: 670 VIHRYCQMGKVDDLVAILEKMISR 693
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M++ + A++ TY +L+D L K + +G+ P TY ++ C+ G+
Sbjct: 620 MYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGK 679
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ D I ++ + T+ Y +I LC G +EA LL K+ +A T +
Sbjct: 680 VDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYA 737
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ + G A K+ M ++ L+
Sbjct: 738 LMEGYLKKGVPLSAYKVACRMFNRNLI 764
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
N+ TY L+DALC S + G++PD C Y +L+ C L +A +
Sbjct: 258 PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGL 317
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+L G V TY +I G CK+ + +A+ LLSKM + P+ IT+ ++I
Sbjct: 318 LEHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQNLVPDLITYNTLIAGQCS 376
Query: 128 NGENDKAEKLLLEMIDKGLL 147
+G D A +LL M + GL+
Sbjct: 377 SGNLDSAYRLLSLMEESGLV 396
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
+I T+N+L++ CK +V G PD TY + G C+ + A ++
Sbjct: 153 PDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKV 212
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F ++ G H +YT +I GL + DEAL+LL KM+ + C PN T+ +I +L
Sbjct: 213 FKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 128 NGENDKAEKLLLEMIDKGL 146
+G+ +A L +M + G+
Sbjct: 273 SGQKSEAMNLFKQMSESGI 291
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN+LL +L + V+ + V PD+ T+N L++G CK G + +A++ L+
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
G TYT I G C+ D A + +M GC N +++ +I LFE + D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 133 KAEKLLLEMID 143
+A LL++M D
Sbjct: 243 EALSLLVKMKD 253
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N ++Y L+ L ++ +D D P++ TY +L+D LC +G+
Sbjct: 216 MTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQ 275
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A +F + G YTV+I C DEA LL M G PN IT+ +
Sbjct: 276 KSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNA 335
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
+I+ F KA LL +M+++ L+ L
Sbjct: 336 LIKG-FCKKNVHKAMGLLSKMLEQNLVPDL 364
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 48 YNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME 107
YN L+ L + G +++ + ++ ++L ++T+ ++NG CK G EA ++ +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 108 IEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
GC P+ T+ S I E D A K+ EM G
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG 220
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 77.8 bits (190), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 68/133 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++TY +++ + + +GV P + TYN ++ LCK +++A +F
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ +GY V TY V+I GL G F L+ +ME EGC PN T+ +IR E
Sbjct: 324 EEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC 383
Query: 129 GENDKAEKLLLEM 141
E +KA L +M
Sbjct: 384 SEVEKALGLFEKM 396
Score = 77.4 bits (189), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 72/142 (50%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G N+ TYN++L ++ + + + D+ TY ++ G AG +K
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 283
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+ +F +++ +G +V TY MI LCK+ + A+ + +M G PN T+ +IR
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 124 SLFENGENDKAEKLLLEMIDKG 145
LF GE + E+L+ M ++G
Sbjct: 344 GLFHAGEFSRGEELMQRMENEG 365
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
MH G ++ ++N++LD LCKS V+ + D TYN++++G C R
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 210
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A E+ +++ +G + + TY M+ G + G A +M+ C + +T+ +
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ GE +A + EMI +G+L
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVL 297
Score = 67.4 bits (163), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G ++ TYN+++ LCK +V+ +G +P++ TYN+L+ GL AG
Sbjct: 294 EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSR 353
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+E+ + +G TY +MI + ++AL L KM C PN T+ +I
Sbjct: 354 GEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Query: 124 SLF 126
+F
Sbjct: 414 GMF 416
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 73/137 (53%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +IT+N++LD+ K+ ++ + ++ TYNIL++G K G++++A
Sbjct: 233 GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ D+ G+ +T +++ +I G CK+GLFD+A + +M G P T+ I +
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 125 LFENGENDKAEKLLLEM 141
L + G D A +LL M
Sbjct: 353 LCDFGRIDDARELLSSM 369
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN + ALC +D PD+ +YN LM G K G+ +A +F DL
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDL 400
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
H ++ TY +I+GLC+ G + A L +M + P+ IT+ ++++ +NG
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 132 DKAEKLLLEMIDKGL 146
A ++ EM+ KG+
Sbjct: 461 SMATEVYDEMLRKGI 475
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ YN +D LCK ++ G+ PD TY ++ G + G+ K A+ ++
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 573
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++L K + +V TY V+I G K G ++A ++M+ G PN +T +++ + +
Sbjct: 574 DEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKA 633
Query: 129 GENDKAEKLLLEMIDKGL 146
G D+A + L +M ++G+
Sbjct: 634 GNIDEAYRYLCKMEEEGI 651
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+TY +++ ++ + + P + TY +L+ G KAGRL+ A + +
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ +G V T+ ++ G+CK G DEA L KME EG PN ++ +I + +
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Query: 131 NDKAEKLLLEMIDK 144
++ KL EM+DK
Sbjct: 671 WEEVVKLYKEMLDK 684
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++++YN+L+ K + P + TYN L+DGLC++G L+ AQ +
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ + V TYT ++ G K G A + +M +G P+ + +
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 129 GENDKAEKLLLEMI 142
G++DKA +L EM+
Sbjct: 493 GDSDKAFRLHEEMV 506
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ITY +L+ K+ ++ +G++PD Y G + G A +
Sbjct: 443 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH 502
Query: 69 HDLLIKGYHITVHT-YTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+++ +H T Y V I+GLCK G +A+ K+ G P+ +T+ ++IR E
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 562
Query: 128 NGENDKAEKLLLEMIDKGL 146
NG+ A L EM+ K L
Sbjct: 563 NGQFKMARNLYDEMLRKRL 581
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG ++ N +L L S ++ + G+ P + T+N ++D KAG L+
Sbjct: 197 KGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLER 256
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+I+ ++ + + TY ++ING K G +EA M G +F +I
Sbjct: 257 VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ G D A + EM++ G+
Sbjct: 317 GYCKQGLFDDAWGVTDEMLNAGI 339
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 66/129 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ITY L+ K+ ++ +GV+P++ T+N L+ G+CKAG + +A
Sbjct: 584 SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 643
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ +G ++YT++I+ C ++E + L +M + P+ T ++ + L ++
Sbjct: 644 CKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
Query: 129 GENDKAEKL 137
E+ + E L
Sbjct: 704 HESREVEFL 712
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 77.8 bits (190), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G +I+TY+SL+D CK ++ G PD+ Y +L+DGL K G +
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +L + + V + +I+G C+ FDEAL + M I G P+ TF +++R
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
G ++A L M GL
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGL 562
Score = 73.6 bits (179), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 73/142 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N++T+ +L++ CK +D +G++PDL Y+ L+DG KAG L
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F L KG + V ++ I+ K G A + +M +G +PN +T+ +I+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L ++G +A + +++ +G+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGM 422
Score = 72.8 bits (177), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 56/114 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N +TY L+D KS ++ ++G+ P + +Y+I++DGLCK GR
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 756
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPN 114
+ +A IFH + V Y ++I G CK G EA L M G P+
Sbjct: 757 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 70.1 bits (170), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 72/139 (51%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+I N ++ L K H ++ + ++PD+ TYN ++ G C RL +A+ I
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F L + + T T++I+ LCK D A+ + S M +G PNA+T+ ++ +
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 128 NGENDKAEKLLLEMIDKGL 146
+ + + + KL EM +KG+
Sbjct: 719 SVDIEGSFKLFEEMQEKGI 737
Score = 69.3 bits (168), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG +++ ++S +D KS + QG+ P++ TY IL+ GLC+ GR+ +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A ++ +L +G ++ TY+ +I+G CK G AL M G P+ + + ++
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
L + G A + ++M+ + +
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSI 492
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 70/138 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +T L+ LCK++ +D ++G +P+ TY LMD K+ ++ + ++F
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG ++ +Y+++I+GLCK G DEA + + P+ + + +IR +
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789
Query: 129 GENDKAEKLLLEMIDKGL 146
G +A L M+ G+
Sbjct: 790 GRLVEAALLYEHMLRNGV 807
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 64/145 (44%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + + Y +L+DA CK + D+ N+++ L K R
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 616
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++DA + F++L+ + TY MI G C DEA + +++ PN +T
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I L +N + D A ++ M +KG
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKG 701
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P +++ Y L+D L K + Q ++ ++ +N L+DG C+ R +A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
++F + I G V T+T ++ EG +EAL L +M G P+A+ + ++I
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 56/135 (41%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++ +NSL+D C+ + D G++PD+ T+ +M GRL++A +F
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ G Y +I+ CK L L M+ + + +I LF+
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 129 GENDKAEKLLLEMID 143
+ A K +I+
Sbjct: 615 HRIEDASKFFNNLIE 629
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G I++ N +L L ++ D G P++ T+ L++G CK G +
Sbjct: 246 RGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A ++F + +G + Y+ +I+G K G+ L S+ +G + + F S I
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
++G+ A + M+ +G+
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGI 387
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 77.4 bits (189), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 73/147 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G+ N++T+ SL++ CKS+ +D ++ DL Y L+DG CK
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K A +F +L G V Y +I+G G D A+ L KM +G + + T+ +
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L ++G + A L E++D G++
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIV 762
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 74/143 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+ YNSL+ +D + G+ DL TY ++DGL K G + A
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+++ +LL G + V++NGL K+G F +A +L +M+ + TPN + + ++I
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
G ++A +L EM++KG++
Sbjct: 810 HHREGNLNEAFRLHDEMLEKGIV 832
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 64/135 (47%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
+YNS++D K D + G P++ T+ L++G CK+ R+ A E+ H++
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ + Y +I+G CK+ A L S++ G PN + S+I G+
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 132 DKAEKLLLEMIDKGL 146
D A L +M++ G+
Sbjct: 712 DAAIDLYKKMVNDGI 726
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++ YN+++ A C+ ++D ++G++P+ TY+IL+DG K
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIE-----GCTPNA 115
++A ++ + + + Y +INGLCK G +A +L + E CT
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCT--- 591
Query: 116 ITFESIIRSLFENGENDKAEKLLLEMIDKG 145
++ SII + G+ D A + EM + G
Sbjct: 592 -SYNSIIDGFVKVGDTDSAVETYREMSENG 620
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 63/131 (48%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
N + CK VD +G++P++ YN +M C+ + A+ IF ++L
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDK 133
KG TY+++I+G K A ++++M N + + +II L + G+ K
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 134 AEKLLLEMIDK 144
A+++L +I +
Sbjct: 573 AKEMLQNLIKE 583
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 1/148 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCT-YNILMDGLCKAG 59
M+ AN + YN++++ LCK + CT YN ++DG K G
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
A E + ++ G V T+T +ING CK D AL + +M+ + +
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGLL 147
++I + + A L E+ + GL+
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELGLM 692
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
GV TY ++ K G +++A + +++ G ++V T ++NG CK +A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
L L ++ME EG P+ + F ++ +N E +KA + + M
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM 406
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 57/123 (46%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ TY +++D L K +++ D G+ PD + +L++GL K G+ A
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKA 784
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ ++ K V Y+ +I G +EG +EA L +M +G + F ++
Sbjct: 785 SKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Query: 125 LFE 127
E
Sbjct: 845 RVE 847
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 77.4 bits (189), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P N + +N ++ A K+ +D +G++PD+ TY +++ G K G + +AQE
Sbjct: 405 PGNAV-FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQE 463
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL- 125
I + K ++ TY +I G CK +DEAL LL++M+ G PNA + +I+S
Sbjct: 464 ILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Query: 126 FENGENDKAEKLLLEMIDKGL 146
+ + +KAE L EM KGL
Sbjct: 524 LKALDWEKAEVLFEEMKQKGL 544
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 70/132 (53%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
I ++ ++ +LC+ +V +G P +N+++ K G L +A+E+
Sbjct: 372 IKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
+ +G V+TYTV+I+G K G+ DEA +L++ + + + +T+ ++IR +
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIE 491
Query: 130 ENDKAEKLLLEM 141
E D+A KLL EM
Sbjct: 492 EYDEALKLLNEM 503
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N +TYN+L++ CK+ VD GV D TYN L G C+AG+
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSA 377
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+++ ++ G H ++T+ ++++GLC G +AL L ++ IT+ II+
Sbjct: 378 AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIK 437
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
L + + + A L + KG+
Sbjct: 438 GLCKADKVEDAWYLFCSLALKGV 460
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++IT+++L+D K + + V P++ TYN L++GLC G L +A
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+++ + L+ KG+ TY +ING CK D+ + +L M +G + T+ ++ +
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQG 368
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ G+ AEK+L M+ G+
Sbjct: 369 YCQAGKFSAAEKVLGRMVSCGV 390
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N++ YN+++D+LC+ V+ G++PD+ TYN L+ L +G +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
I D++ G V T++ +I+ KEG EA ++M PN +T+ S+I
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
L +G D+A+K+L ++ KG
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFF 321
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 70/142 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ ++ +L+D C+ + G +P + T+ L++G C R +A
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ GY V Y +I+ LC++G + AL +L M+ G P+ +T+ S+I
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
LF +G + ++L +M+ G+
Sbjct: 229 LFHSGTWGVSARILSDMMRMGI 250
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
NI+TYNSL++ LC +D +G P+ TYN L++G CKA R+ D +I
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ G TY + G C+ G F A +L +M G P+ TF ++ L ++
Sbjct: 348 CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH 407
Query: 129 GENDKA 134
G+ KA
Sbjct: 408 GKIGKA 413
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + TYN+L C++ GV PD+ T+NIL+DGLC G+
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A DL + + TY ++I GLCK ++A L + ++G +P+ IT+ +
Sbjct: 410 IGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYIT 469
Query: 121 IIRSLFENGENDKAEKLLLEM 141
++ L +A +L +M
Sbjct: 470 MMIGLRRKRLWREAHELYRKM 490
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+T+ SL++ C + G +P++ YN ++D LC+ G++ A
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTA 203
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ + G V TY +I L G + + +LS M G +P+ ITF ++I
Sbjct: 204 LDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDV 263
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ G+ +A+K EMI + +
Sbjct: 264 YGKEGQLLEAKKQYNEMIQRSV 285
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ T+N LLD LC + + TYNI++ GLCKA +++DA
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIE-GCTP 113
+F L +KG V TY M+ GL ++ L+ EA L KM+ E G P
Sbjct: 449 WYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 77.0 bits (188), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 70/137 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++TY LL+ C+ ++ D G++PD+ +N++++GL ++ + DA ++F
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 356
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
H + KG V +YT+MI CK+ + A+ M G P+A + +I
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 129 GENDKAEKLLLEMIDKG 145
+ D +LL EM +KG
Sbjct: 417 KKLDTVYELLKEMQEKG 433
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T N LLD+L ++ + + P++ TY +L++G C+ L +A I++D+
Sbjct: 266 TINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ G + + VM+ GL + +A+ L M+ +G PN ++ +IR +
Sbjct: 325 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 132 DKAEKLLLEMIDKGL 146
+ A + +M+D GL
Sbjct: 385 ETAIEYFDDMVDSGL 399
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 61/146 (41%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N+ +Y ++ CK ++ D G+QPD Y L+ G +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L E+ ++ KG+ TY +I + + + + + +KM P+ TF
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 478
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
I++S F + + EMI KG+
Sbjct: 479 IMKSYFVARNYEMGRAVWDEMIKKGI 504
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 62/138 (44%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+ +N +L+ L +S +G P++ +Y I++ CK ++ A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E F D++ G YT +I G + D LL +M+ +G P+ T+ ++I+
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 125 LFENGENDKAEKLLLEMI 142
+ + ++ +MI
Sbjct: 448 MANQKMPEHGTRIYNKMI 465
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 59/137 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG P + TYN+L+ + + ++P + T+N++M A
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 488
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ + ++ +++ KG ++YTV+I GL EG EA L +M +G I +
Sbjct: 489 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Query: 121 IIRSLFENGENDKAEKL 137
G+ + E+L
Sbjct: 549 FAADFHRGGQPEIFEEL 565
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 77.0 bits (188), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 70/137 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++TY LL+ C+ ++ D G++PD+ +N++++GL ++ + DA ++F
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
H + KG V +YT+MI CK+ + A+ M G P+A + +I
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 415
Query: 129 GENDKAEKLLLEMIDKG 145
+ D +LL EM +KG
Sbjct: 416 KKLDTVYELLKEMQEKG 432
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T N LLD+L ++ + + P++ TY +L++G C+ L +A I++D+
Sbjct: 265 TINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 323
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ G + + VM+ GL + +A+ L M+ +G PN ++ +IR +
Sbjct: 324 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 383
Query: 132 DKAEKLLLEMIDKGL 146
+ A + +M+D GL
Sbjct: 384 ETAIEYFDDMVDSGL 398
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 61/146 (41%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N+ +Y ++ CK ++ D G+QPD Y L+ G +
Sbjct: 358 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 417
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L E+ ++ KG+ TY +I + + + + + +KM P+ TF
Sbjct: 418 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 477
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
I++S F + + EMI KG+
Sbjct: 478 IMKSYFVARNYEMGRAVWDEMIKKGI 503
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 62/138 (44%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I+ +N +L+ L +S +G P++ +Y I++ CK ++ A
Sbjct: 327 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 386
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E F D++ G YT +I G + D LL +M+ +G P+ T+ ++I+
Sbjct: 387 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 446
Query: 125 LFENGENDKAEKLLLEMI 142
+ + ++ +MI
Sbjct: 447 MANQKMPEHGTRIYNKMI 464
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 59/137 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG P + TYN+L+ + + ++P + T+N++M A
Sbjct: 428 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 487
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ + ++ +++ KG ++YTV+I GL EG EA L +M +G I +
Sbjct: 488 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 547
Query: 121 IIRSLFENGENDKAEKL 137
G+ + E+L
Sbjct: 548 FAADFHRGGQPEIFEEL 564
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 76.3 bits (186), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 69/141 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +I+TYN+LL A D D G+ PDL TY+ L++ K R
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ ++ ++ G + +Y V++ K G EA+ + +M+ GCTPNA T+
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 121 IIRSLFENGENDKAEKLLLEM 141
++ ++G D +L LEM
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEM 378
Score = 66.6 bits (161), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 71/146 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M+ G ++ TY+ L++ K ++ G PD+ +YN+L++ K+G
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS 332
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K+A +FH + G +TY+V++N + G +D+ L +M+ P+A T+
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I E G + L +M+++ +
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENI 418
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 65/141 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +I +YN LL+A KS + G P+ TY++L++ ++GR
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
D +++F ++ TY ++I + G F E + L M E P+ T+E
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 121 IIRSLFENGENDKAEKLLLEM 141
II + + G ++ A K+L M
Sbjct: 428 IIFACGKGGLHEDARKILQYM 448
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 62/135 (45%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN L++ + + ++ ++PD+ TY ++ K G +DA++I +
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ YT +I + L++EAL + M G P+ TF S++ S G
Sbjct: 449 TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLV 508
Query: 132 DKAEKLLLEMIDKGL 146
++E +L ++D G+
Sbjct: 509 KESEAILSRLVDSGI 523
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 49/88 (55%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
+P+ Y I++ L + G L E+F ++ +G +V +YT +IN + G ++ +L
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 102 LLSKMEIEGCTPNAITFESIIRSLFENG 129
LL +M+ E +P+ +T+ ++I + G
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGG 225
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGL-FD 97
QGV + +Y L++ + GR + + E+ + + ++ TY +IN + GL ++
Sbjct: 170 QGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWE 229
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
L L ++M EG P+ +T+ +++ + G D+AE + M D G++ L
Sbjct: 230 GLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 76.3 bits (186), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 69/141 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++TYN+L+ + C+ + + V PDL TY L+ GLCK GR
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGR 321
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A + FH ++ +G +Y +I CKEG+ ++ LL +M P+ T +
Sbjct: 322 VREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKV 381
Query: 121 IIRSLFENGENDKAEKLLLEM 141
I+ G A ++E+
Sbjct: 382 IVEGFVREGRLLSAVNFVVEL 402
Score = 75.9 bits (185), Expect = 9e-15, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N T+N L + C + ++G +PDL TYN L+ C+ GRLK+A ++
Sbjct: 235 NTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLY 294
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ + + TYT +I GLCK+G EA +M G P+ +++ ++I + +
Sbjct: 295 KIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKE 354
Query: 129 GENDKAEKLLLEMI 142
G +++KLL EM+
Sbjct: 355 GMMQQSKKLLHEML 368
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G+ P+ T+NIL + C ++ + + +G+ + TY +++ C+ G EA
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
L M P+ +T+ S+I+ L ++G +A + M+D+G+
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G A TYN+L+++L + ++ +Q D TY L+ LC+ GR ++
Sbjct: 441 EGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNRE 500
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+ + ++ ++ G CKE FD+A LLS +E + ++ S+++
Sbjct: 501 AESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVK 560
Query: 124 SLFENG 129
++ E G
Sbjct: 561 AVCETG 566
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 76.3 bits (186), Expect = 8e-15, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + I NSL+DAL K + ++ D ++PD T+NIL+ G CKA + DA
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDA 292
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + + + + V TYT + CKEG F +L +M GC PN +T+ ++ S
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 125 LFENGENDKAEKLLLEMIDKG 145
L ++ + +A + +M + G
Sbjct: 353 LGKSKQVAEALGVYEKMKEDG 373
Score = 69.3 bits (168), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 65/135 (48%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T+N L+ CK+ D PD+ TY ++ CK G + E+ ++
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G + V TYT++++ L K EAL + KM+ +GC P+A + S+I L + G
Sbjct: 335 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 394
Query: 132 DKAEKLLLEMIDKGL 146
A ++ +M ++G+
Sbjct: 395 KDAAEIFEDMTNQGV 409
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N++TY ++ +L KS V + G PD Y+ L+ L K GR
Sbjct: 334 MRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGR 393
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEI---EGCTPNAIT 117
KDA EIF D+ +G V Y MI+ + AL LL +ME E C+PN T
Sbjct: 394 FKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVET 453
Query: 118 FESII 122
+ ++
Sbjct: 454 YAPLL 458
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G +++ + +D L K+ VD G PD+ Y++L+ LCKA R +
Sbjct: 573 EGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +F++++ KG TV TY MI+G CKEG D L+ + +M + P+ IT+ S+I
Sbjct: 633 ADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIH 692
Query: 124 SLFENGENDKA 134
L +G +A
Sbjct: 693 GLCASGRPSEA 703
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + TYNS++D CK +D + PD+ TY L+ GLC +GR
Sbjct: 640 MVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGR 699
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A ++++ K + T+ +I GLCK G EAL +ME + P++ + S
Sbjct: 700 PSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLS 759
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
++ S + + + EM+ KG
Sbjct: 760 LVSSFLSSENINAGFGIFREMVHKG 784
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 9 NIITYNSLLDALCKSHH--VDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
N TYN LL+A+ KS+ V+ D G D T ++ C G+ + A
Sbjct: 176 NAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALS 235
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+F+++L +G+ + H T+++ CK G D+A L+ +E N T+ +I
Sbjct: 236 VFNEILSRGW-LDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFV 294
Query: 127 ENGENDKAEKLLLEMIDKGL 146
+ DKA +L +M G+
Sbjct: 295 KESRIDKAFQLFEKMRRMGM 314
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
++ + PD + +I+++ L KA ++ A + HD++ G Y +I G+CKEG +
Sbjct: 432 NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSE 491
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
E+L LL +M+ G P+ T I L E + A LL +M
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM 535
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 16 LLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKG 75
+++ L K++ VD G+ P YN +++G+CK GR +++ ++ ++ G
Sbjct: 445 VINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAG 504
Query: 76 YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAE 135
+ T + L + F AL LL KM G P +++ L ENG A
Sbjct: 505 VEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDAC 564
Query: 136 KLLLEMIDKGLL 147
K L ++ +G L
Sbjct: 565 KYLDDVAGEGFL 576
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T+NS++ CK V+ +PD T NIL++GLCK G + A F +
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF-NT 616
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
LI+ + TY MI+ CK+ EA LLS+ME +G P+ T+ S I L E+G+
Sbjct: 617 LIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKL 676
Query: 132 DKAEKLL 138
+ ++LL
Sbjct: 677 SETDELL 683
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
K P N+ TYN++L A+ K + G+ P+ TYN L+ G CK G LK+
Sbjct: 235 KVNPDNV-TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +I + + TY ++INGLC G E L L+ M+ P+ +T+ ++I
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
FE G + +A KL+ +M + G+
Sbjct: 354 GCFELGLSLEARKLMEQMENDGV 376
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
VK P + T+NSL+ LC + + G+ PD T+N ++ G CK GR++
Sbjct: 515 VKITPT-VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE 573
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
A E +++ + + +T +++NGLCKEG+ ++AL + + IE + +T+ ++I
Sbjct: 574 KAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMI 632
Query: 123 RSLFENGENDKAEKLLLEMIDKGL 146
+ ++ + +A LL EM +KGL
Sbjct: 633 SAFCKDKKLKEAYDLLSEMEEKGL 656
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N +TYN+L+ CK + V PDLCTYNIL++GLC AG
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++ E+ + V TY +I+G + GL EA L+ +ME +G N +T
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Query: 121 IIRSLFENGENDKAEKLLLEMID 143
++ L + + + + + E++D
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVD 408
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 41 VQPDLCTYNILMDGLCK---AGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
++P+L T N L+ GL + + + A+E+F D++ G + V T+ V++NG C EG +
Sbjct: 162 LKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLE 221
Query: 98 EALALLSKMEIE-GCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
+AL +L +M E P+ +T+ +I++++ + G ++LLL+M GL+
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLV 272
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N IT N++LDALCK +D +G D TY L+ G + +
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A E++ ++ TV T+ +I GLC G + A+ ++ G P+ TF S
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 121 IIRSLFENGENDKAEKLLLEMI 142
II + G +KA + E I
Sbjct: 562 IILGYCKEGRVEKAFEFYNESI 583
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
MH G +I+TY++L+ A K + +G++ + T N ++D LCK +
Sbjct: 409 MH--GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L +A + + +G+ + TY +I G +E ++AL + +M+ TP TF S
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L +G+ + A + E+ + GLL
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLL 553
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 75.5 bits (184), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 69/138 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + I YN LLD K+ V +GV+ TYNIL+DGL + GR
Sbjct: 350 MQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR 409
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +F DL KG + T++++ LC+EG + A+ L+ +ME G + + +T S
Sbjct: 410 AEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISS 469
Query: 121 IIRSLFENGENDKAEKLL 138
++ + G D EKL+
Sbjct: 470 LLIGFHKQGRWDWKEKLM 487
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 71/146 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+ V G + TY L+ CKS+ +D G PD YN L+DG KA +
Sbjct: 315 LKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARK 374
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A ++F ++ +G + TY ++I+GL + G + L ++ +G +AITF
Sbjct: 375 VTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSI 434
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+ L G+ + A KL+ EM +G
Sbjct: 435 VGLQLCREGKLEGAVKLVEEMETRGF 460
Score = 69.3 bits (168), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 61/137 (44%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I TYNSL+ LC G +PD TY IL+ G CK+ R+ DA I+
Sbjct: 288 DICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIY 347
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G+ Y +++G K EA L KM EG + T+ +I LF N
Sbjct: 348 GEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRN 407
Query: 129 GENDKAEKLLLEMIDKG 145
G + L ++ KG
Sbjct: 408 GRAEAGFTLFCDLKKKG 424
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYNS++ + K + + D+ TYN+++ GL K GR A + L
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+G ++ + Y +IN L K DEA L M+ G P+ +++ ++I + G+
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 132 DKAEKLLLEMIDKGLL 147
+A K L M+D G L
Sbjct: 752 KEAYKYLKAMLDAGCL 767
Score = 66.2 bits (160), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 58/104 (55%)
Query: 43 PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL 102
PD+CTYN L+ LC G+ KDA ++ +L + G+ TY ++I G CK D+A+ +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 103 LSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+M+ G P+ I + ++ + + +A +L +M+ +G+
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGV 390
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+I TYN ++ L K D QG D+ YN L++ L KA RL +A ++
Sbjct: 663 ADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQL 722
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F + G + V +Y MI K G EA L M GC PN +T ++I+ L +
Sbjct: 723 FDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
Query: 128 NGENDKAEK 136
E + +K
Sbjct: 782 EMEKARFKK 790
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
++N +L+ L + D GV+ D C NIL+ GLC++G L+ A ++ +
Sbjct: 169 SFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEF 228
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ V T++ +I G C +G F+EA LL +ME E P+ ITF +I L + G
Sbjct: 229 PQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRV 288
Query: 132 DKAEKLLLEMIDKG 145
++ LL M KG
Sbjct: 289 EEGIDLLERMKVKG 302
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 75/133 (56%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
N L+ LC+S +++ Q +P++ T++ L+ G C G+ ++A ++ +
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDK 133
+ T+ ++I+GL K+G +E + LL +M+++GC PN T++ ++ L + N +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 134 AEKLLLEMIDKGL 146
A++++ +MI G+
Sbjct: 326 AKEMMSQMISWGM 338
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
K +P N++T++ L+ C + + ++PD T+NIL+ GL K GR+++
Sbjct: 232 KSRP-NVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEE 290
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
++ + +KG TY ++ GL + EA ++S+M G P+ ++++ ++
Sbjct: 291 GIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVL 350
Query: 124 SLFENGENDKAEKLLLEMIDKGLLEK 149
L E + + +L +M++ G + K
Sbjct: 351 GLCETKSVVEMDWVLRQMVNHGFVPK 376
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
D G P ++N +++ L A + +IF G I ++I GLC+ G +
Sbjct: 160 DFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLE 219
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
AL LL + + PN +TF +IR G+ ++A KLL M
Sbjct: 220 AALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 74/143 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+ITY SL++ LCK++ +D ++GV+ D+ Y L+DG CK ++ A
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+F +LL +G + + Y +I+G G AL L KM +G + T+ ++I
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
L ++G A +L EM GL+
Sbjct: 734 LLKDGNLILASELYTEMQAVGLV 756
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 66/136 (48%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
++YNS++D K +D G+ P++ TY LM+GLCK R+ A E+ +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ KG + + Y +I+G CK + A AL S++ EG P+ + S+I G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 131 NDKAEKLLLEMIDKGL 146
A L +M+ GL
Sbjct: 705 MVAALDLYKKMLKDGL 720
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 35/182 (19%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQP----------------- 43
M KG +I Y +L+D CK +++ ++G+ P
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 44 ------------------DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTV 85
DL TY L+DGL K G L A E++ ++ G YTV
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 86 MINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
++NGL K+G F + + + +M+ TPN + + ++I + G D+A +L EM+DKG
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 146 LL 147
+L
Sbjct: 825 IL 826
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 72/140 (51%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
AN+ N++L LCK D +G+ P++ +YN +M G C+ + A+ +
Sbjct: 441 ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F ++L KG +TY+++I+G + AL +++ M N + +++II L +
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 128 NGENDKAEKLLLEMIDKGLL 147
G+ KA +LL MI++ L
Sbjct: 561 VGQTSKARELLANMIEEKRL 580
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 36/182 (19%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDG------ 54
M +G N+++YN+++ C+ ++D ++G++P+ TY+IL+DG
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 55 -----------------------------LCKAGRLKDAQEIFHDLLI-KGYHITVHTYT 84
LCK G+ A+E+ +++ K ++ +Y
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 85 VMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
+I+G KEG D A+A +M G +PN IT+ S++ L +N D+A ++ EM +K
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 145 GL 146
G+
Sbjct: 649 GV 650
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGV-QPDLCTYNILMDGLCKAGRLK 62
+G + + Y+ + A CK+ + ++ + P TY ++ K G +
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
DA + ++L G + V T +I G CK AL L KME EG +PN++TF +I
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 123 RSLFENGENDKAEKLLLEMIDKGL 146
+NGE +KA + +M GL
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGL 405
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N++ SL+ CK++ + +G P+ T+++L++ K G
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Query: 61 LKDAQEIFHDLLIKGYHITV-HTYTVM--------------------------------- 86
++ A E + + + G +V H +T++
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTI 449
Query: 87 INGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
++ LCK+G DEA LLSKME G PN +++ +++ D A + +++KGL
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY S++ A K ++D G+ ++ L+ G CK L A +F +
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+G T++V+I K G ++AL KME+ G TP+ +II+ + ++
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425
Query: 132 DKAEKLLLEMIDKGL 146
++A KL E + GL
Sbjct: 426 EEALKLFDESFETGL 440
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY +L+D L K ++ G+ PD Y ++++GL K G+ ++F ++
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
V Y +I G +EG DEA L +M +G P+ TF+ ++ N +
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQP 845
Query: 132 DKAEKL 137
+A L
Sbjct: 846 VRAASL 851
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G + ITYNS++ LCK + + + V T+N L++G CKA R+KD
Sbjct: 74 RGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKD 124
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+F ++ +G V TYT +I+G + G F+ AL + +M G ++ITF I+
Sbjct: 125 GMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILP 184
Query: 124 SLFENGENDKAEKLLLE 140
L E KA +LL+
Sbjct: 185 QLCSRKELRKAVAMLLQ 201
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
D YNI++ GLCKAG+ +A IF +LLI G V TY +MI + A L
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 104 SKMEIEGCTPNAITFESIIRSLFENGENDKAEKL 137
++M G P+ IT+ S+I L + + +A K+
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV 102
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
+G+ PD TYN ++ GLCK +L A+++ + T+ +ING CK +
Sbjct: 74 RGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFNTLINGYCKATRVKD 124
Query: 99 ALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+ L +M G N IT+ ++I + G+ + A + EM+ G+
Sbjct: 125 GMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGV 172
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 83 YTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMI 142
Y ++I+GLCK G FDEA + + + I G P+ T+ +IR +AEKL EMI
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----SSLGRAEKLYAEMI 72
Query: 143 DKGLL 147
+GL+
Sbjct: 73 RRGLV 77
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+ YN DAL K V+ D+G+ PD+ Y L+DG C G++ DA ++ +
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
++ G + TY V+++GL + G +E L + +M+ EG PNA+T II L
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGL 503
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N + + +L CK D + D YN+ D L K GR+++
Sbjct: 347 KGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEE 406
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A E+ ++ +G V YT +I+G C +G +AL L+ +M G +P+ IT+ ++
Sbjct: 407 AFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVS 466
Query: 124 SLFENGENDKAEKLLLEMIDKG 145
L NG ++ ++ M +G
Sbjct: 467 GLARNGHEEEVLEIYERMKAEG 488
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCK------ 57
+G ++ TY ++ C+ + + +G++PD+ TY +L+D K
Sbjct: 620 RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHH 679
Query: 58 --------AGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIE 109
G+ K A E+ + G + V YTV+I+ CK ++A L +M
Sbjct: 680 ETCSVQGEVGKRK-ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS 738
Query: 110 GCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
G P+ + + ++I S F G D A L+ E+ K
Sbjct: 739 GLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++I Y +L+D C V G+ PDL TYN+L+ GL + G
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ EI+ + +G T +V+I GLC EA S +E + C N +F
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE-QKCPENKASF-- 530
Query: 121 IIRSLFENGENDKAEKLLLEM 141
++ E G + KA K + +
Sbjct: 531 -VKGYCEAGLSKKAYKAFVRL 550
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
D+ N LM+ + + G++ +F L G +TY +++ LC++G +EA LL
Sbjct: 180 DIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL 239
Query: 104 SKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
+ E + +++ I L GE +KA L+LE+ID+ L
Sbjct: 240 IENE------SVFGYKTFINGLCVTGETEKAVALILELIDRKYL 277
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG +++ N+L+D C ++D + PD TYN LM GLC G+ ++
Sbjct: 461 KGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEE 520
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+E+ ++ +G +Y +I+G K+G A + +M G P +T+ ++++
Sbjct: 521 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLK 580
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
L +N E + AE+LL EM +G++
Sbjct: 581 GLSKNQEGELAEELLREMKSEGIV 604
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP TY SL+ LC+ + +G++PDL N LMDG C G + A
Sbjct: 429 QPTQF-TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+ ++ + + TY ++ GLC EG F+EA L+ +M+ G P+ I++ ++I
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547
Query: 126 FENGENDKAEKLLLEMIDKGL 146
+ G+ A + EM+ G
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGF 568
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
+N+ T+N +++ LCK + G++P + TYN L+ G GR++ A+ I
Sbjct: 223 SNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLI 282
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
++ KG+ + TY +++ +C EG A +L +M+ G P+++++ +IR
Sbjct: 283 ISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSN 339
Query: 128 NGENDKAEKLLLEMIDKGLL 147
NG+ + A EM+ +G++
Sbjct: 340 NGDLEMAFAYRDEMVKQGMV 359
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG + +TYN L++ C+ G+QP TY L+ LC+ + ++
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A E+F ++ KG + +++G C G D A +LL +M++ P+ +T+ ++R
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
L G+ ++A +L+ EM +G+
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGI 533
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 68/136 (50%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
++YN L+ + ++ QG+ P TYN L+ GL +++ A+ + +
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ KG + TY ++ING C+ G +A AL +M +G P T+ S+I L +
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 131 NDKAEKLLLEMIDKGL 146
+A++L +++ KG+
Sbjct: 448 TREADELFEKVVGKGM 463
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+TYN L+ LC + +G++PD +YN L+ G K G K A + +
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+L G++ T+ TY ++ GL K + A LL +M+ EG PN +F S+I ++
Sbjct: 563 MLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%)
Query: 2 HVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
H + + + I ++ L+ C+ VD ++G P T N ++ L + R+
Sbjct: 147 HDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRI 206
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
++A + D+ V+T+ +MIN LCKEG +A L ME+ G P +T+ ++
Sbjct: 207 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTL 266
Query: 122 IRSLFENGENDKAEKLLLEMIDKGL 146
++ G + A ++ EM KG
Sbjct: 267 VQGFSLRGRIEGARLIISEMKSKGF 291
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG T N +L L + + ++ ++ ++ T+NI+++ LCK G+
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
LK A+ + + G T+ TY ++ G G + A ++S+M+ +G P+ T+
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
I+ + G +A ++L EM + GL+
Sbjct: 301 ILSWMCNEG---RASEVLREMKEIGLV 324
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++ TYN +L +C + G+ PD +YNIL+ G G
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASEVLREMK---EIGLVPDSVSYNILIRGCSNNGD 342
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ A +++ +G T +TY +I+GL E + A L+ ++ +G +++T+
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I ++G+ KA L EM+ G+
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGI 428
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 63/118 (53%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YNSLL ALC +G++PD TY IL++G C AG++K+AQE ++
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+G++ ++I GL G + A ++SKM G P+ TF +I ++ ++GE
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 70/139 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I T+N L++A+ KS V+ G+ D+ TY L+ + K G++ +A +
Sbjct: 286 DIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLL 345
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ + G+ Y +I G+C+ G+FD+A + S M+++ PN + +I
Sbjct: 346 NNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRG 405
Query: 129 GENDKAEKLLLEMIDKGLL 147
G+ A L+EM + GL+
Sbjct: 406 GKFVDAANYLVEMTEMGLV 424
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 59/126 (46%)
Query: 16 LLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKG 75
L++ L + +++ G PD+ T+NIL++ + K+G ++ E+++ G
Sbjct: 258 LIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLG 317
Query: 76 YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAE 135
+ + TY +I + K G DEA LL+ +G P + II+ + NG D A
Sbjct: 318 LCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAF 377
Query: 136 KLLLEM 141
+M
Sbjct: 378 SFFSDM 383
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 60/133 (45%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I TY +L+ A+ K +D + G +P Y ++ G+C+ G DA
Sbjct: 317 GLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDA 376
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
F D+ +K + YT++I + G F +A L +M G P + F+ +
Sbjct: 377 FSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDG 436
Query: 125 LFENGENDKAEKL 137
L G++D A ++
Sbjct: 437 LKNGGKHDLAMRI 449
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 47/108 (43%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G Q + YN L+ LC A + ++ KG TY +++NG C G EA
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEA 236
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
L +M G P A + +I L G + A++++ +M G +
Sbjct: 237 QEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFV 284
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P +I+ L+D+ K+ +V + V D YN+++ GLC +G + A
Sbjct: 262 PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYG 321
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
D++ +G + V TY +I+ LCKEG FDEA L M+ G P+ I+++ II+ L
Sbjct: 322 FMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLC 381
Query: 127 ENGENDKAEKL 137
+G+ ++A +
Sbjct: 382 IHGDVNRANEF 392
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
++ +N ++D + GV+P++ T N L+ G K GRL DA + +
Sbjct: 405 VLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKN 464
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
++ H TY +++ C G A L +M GC P+ IT+ ++R L G
Sbjct: 465 EMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKG 524
Query: 130 ENDKAEKLLLEMIDKGL 146
KAE LL + G+
Sbjct: 525 RLKKAESLLSRIQATGI 541
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
++S++ LC +D GV P L T+N L++GLCKAG ++ A + ++
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE-N 131
G +Y +I GLC D+AL L + M G PN +T I+ +L + G
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 132 DKAEKLLLEMIDKG 145
+ +KLL E++D
Sbjct: 244 NNNKKLLEEILDSS 257
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+ T N+L+ K + + PD TYN+L+ C G L+ A
Sbjct: 435 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF 118
+++ ++L +G + TYT ++ GLC +G +A +LLS+++ G T + + F
Sbjct: 495 FQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M K PA+ + YN ++ LC S ++ +GV PD+ TYN L+ LCK G+
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGK 350
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A ++ + G +Y V+I GLC G + A L M P + +
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I G+ A +L M+ G+
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGV 436
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G ++ TYN+L+ ALCK D + GV PD +Y +++ GLC G +
Sbjct: 329 RGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNR 388
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A E +L V + V+I+G + G AL++L+ M G PN T ++I
Sbjct: 389 ANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIH 448
Query: 124 SLFENGE 130
+ G
Sbjct: 449 GYVKGGR 455
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +IT+N LL+ LCK+ +++ + G P+ +YN L+ GLC
Sbjct: 147 MIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNN 206
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNA----I 116
+ A +F+ + G T ++++ LC++G+ L + ++ NA +
Sbjct: 207 VDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIV 266
Query: 117 TFESIIRSLFENGENDKAEKLLLEMIDKGL 146
++ S F+NG +A ++ EM K +
Sbjct: 267 ICTILMDSCFKNGNVVQALEVWKEMSQKNV 296
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 45 LCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLS 104
L ++ +M LC G+L A + ++ G + T+ ++NGLCK G ++A L+
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180
Query: 105 KMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+M G +PN +++ ++I+ L DKA L M G+
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGI 222
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 73.9 bits (180), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 60/100 (60%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
+PD+ Y L+ G C+AG + +A+++F ++ + G V+TY+++I+ LC+ G A
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
Query: 102 LLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
+ + M GC PNAITF +++R + G +K ++ +M
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM 351
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 71/136 (52%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++I Y +L+ C++ + G++P++ TY+I++D LC+ G++ A ++F
Sbjct: 254 DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVF 313
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
D+L G T+ ++ K G ++ L + ++M+ GC P+ IT+ +I + +
Sbjct: 314 ADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRD 373
Query: 129 GENDKAEKLLLEMIDK 144
+ A K+L MI K
Sbjct: 374 ENLENAVKVLNTMIKK 389
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 70/143 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G N+ TY+ ++DALC+ + D G P+ T+N LM KAGR
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ ++++ + G TY +I C++ + A+ +L+ M + C NA TF +
Sbjct: 341 TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 121 IIRSLFENGENDKAEKLLLEMID 143
I R + + + + A ++ +M++
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMME 423
Score = 60.1 bits (144), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 64/140 (45%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N IT+N+L+ K+ + G +PD TYN L++ C+ L++A
Sbjct: 320 GCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENA 379
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ + ++ K + T+ + + K+ + A + SKM C PN +T+ ++R
Sbjct: 380 VKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRM 439
Query: 125 LFENGENDKAEKLLLEMIDK 144
+ D K+ EM DK
Sbjct: 440 FVGSKSTDMVLKMKKEMDDK 459
Score = 59.7 bits (143), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
D G PD ++I++ L + R +AQ F D L + V YT ++ G C+ G
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
EA + +M++ G PN T+ +I +L G+ +A + +M+D G
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSG 320
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N T+N++ + K V+ + +P+ TYNILM + ++
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGC-TPNAITFESIIRSLFE 127
++ K V+TY +++ C G ++ A L +M E C TP+ +E ++ L
Sbjct: 454 KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513
Query: 128 NGENDKAEKLLLEMIDKGLLEK 149
G+ K E+L+ +MI KGL+ +
Sbjct: 514 AGQLKKHEELVEKMIQKGLVAR 535
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 73.6 bits (179), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 73/142 (51%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N++T+ +L++ CK +D +G++PDL Y+ L+DG KAG L
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F L KG + V ++ I+ K G A + +M +G +PN +T+ +I+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L ++G +A + +++ +G+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGM 422
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N++TY L+ LC+ + +G++P + TY+ L+DG CK G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+ ++ D++ GY V Y V+++GL K+GL A+ KM + N + F S
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+I D+A K+ M
Sbjct: 502 LIDGWCRLNRFDEALKVFRLM 522
Score = 72.8 bits (177), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 56/114 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N +TY L+D KS ++ ++G+ P + +Y+I++DGLCK GR
Sbjct: 668 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 727
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPN 114
+ +A IFH + V Y ++I G CK G EA L M G P+
Sbjct: 728 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G +I+TY+SL+D CK ++ G PD+ Y +L+DGL K G +
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +L + + V + +I+G C+ FDEAL + M I G P+ TF +++R
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 124 -SLFENG 129
S+ E+
Sbjct: 540 VSIMEDA 546
Score = 70.1 bits (170), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 72/139 (51%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+I N ++ L K H ++ + ++PD+ TYN ++ G C RL +A+ I
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F L + + T T++I+ LCK D A+ + S M +G PNA+T+ ++ +
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Query: 128 NGENDKAEKLLLEMIDKGL 146
+ + + + KL EM +KG+
Sbjct: 690 SVDIEGSFKLFEEMQEKGI 708
Score = 69.3 bits (168), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG +++ ++S +D KS + QG+ P++ TY IL+ GLC+ GR+ +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A ++ +L +G ++ TY+ +I+G CK G AL M G P+ + + ++
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
L + G A + ++M+ + +
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSI 492
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 70/138 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +T L+ LCK++ +D ++G +P+ TY LMD K+ ++ + ++F
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG ++ +Y+++I+GLCK G DEA + + P+ + + +IR +
Sbjct: 701 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 760
Query: 129 GENDKAEKLLLEMIDKGL 146
G +A L M+ G+
Sbjct: 761 GRLVEAALLYEHMLRNGV 778
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 41/178 (23%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILM------DGLCK----- 57
N++ +NSL+D C+ + D G++PD+ T+ +M D CK
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT 554
Query: 58 ------------------------------AGRLKDAQEIFHDLLIKGYHITVHTYTVMI 87
R++DA + F++L+ + TY MI
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 88 NGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
G C DEA + +++ PN +T +I L +N + D A ++ M +KG
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G I++ N +L L ++ D G P++ T+ L++G CK G +
Sbjct: 246 RGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A ++F + +G + Y+ +I+G K G+ L S+ +G + + F S I
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
++G+ A + M+ +G+
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGI 387
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 73.6 bits (179), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 64/135 (47%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++T +++ LC V +G + D+ N L+ G C G+++ AQ F
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 341
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KGY V TY ++I G C G+ D AL + M+ + N TF ++IR L
Sbjct: 342 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 401
Query: 129 GENDKAEKLLLEMID 143
G D K+L M D
Sbjct: 402 GRTDDGLKILEMMQD 416
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N + YN+LL ALCK+ V +P+ T+NIL+ C +
Sbjct: 208 MKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQK 263
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L + + G+ V T T ++ LC EG EAL +L ++E +G + + +
Sbjct: 264 LIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNT 323
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+++ G+ A++ +EM KG L
Sbjct: 324 LVKGYCALGKMRVAQRFFIEMERKGYL 350
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIF-HDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
G++P L +N ++D L K + A+E F ++ G H V+TY +++ GL +
Sbjct: 142 GIKPSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGD 200
Query: 99 ALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
LL M+ G PNA+ + +++ +L +NG+ +A L+ EM
Sbjct: 201 GFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM 243
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 61/131 (46%)
Query: 17 LDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGY 76
L +LC+ +D +G P + + L+ + G+++++ E+ +D++ +GY
Sbjct: 465 LISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGY 524
Query: 77 HITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEK 136
T+ +I G CK+ + + M GC P+ ++ ++ L G+ KA
Sbjct: 525 LPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWL 584
Query: 137 LLLEMIDKGLL 147
L M++K ++
Sbjct: 585 LFSRMVEKSIV 595
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ +NS+LD L K G+ D+ TY ILM GL R+ D
Sbjct: 142 GIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDG 201
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ + G Y +++ LCK G A +L+S+M+ PN +TF +I+ S
Sbjct: 202 FKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTF-NILIS 256
Query: 125 LFENGENDKAEKLLLEMIDKGLLEK 149
+ N +KL+ M+ LLEK
Sbjct: 257 AYCN-----EQKLIQSMV---LLEK 273
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 62/150 (41%), Gaps = 10/150 (6%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N+ TYN L+ C +D ++ + T+N L+ GL GR
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGR 403
Query: 61 LKDAQEIFHDLLIKGYHITVH-----TYTVMINGLCKEGLFDEALALLSKMEIEGCTPNA 115
D +I + TVH Y +I G KE +++AL L KM E P A
Sbjct: 404 TDDGLKILEMMQDSD---TVHGARIDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRA 458
Query: 116 ITFESIIRSLFENGENDKAEKLLLEMIDKG 145
+ + SL E G D + +MI +G
Sbjct: 459 VDRSFKLISLCEKGGMDDLKTAYDQMIGEG 488
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 39/166 (23%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T+ L+ ++C++ V G P + T+N L+DGLCK+G LK+A+ + H +
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Query: 72 ----------------------------LIKGYHITVH-----------TYTVMINGLCK 92
++K Y H +Y V+ING C+
Sbjct: 470 EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCR 529
Query: 93 EGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLL 138
G D AL LL+ ++++G +P+++T+ ++I L G ++A KL
Sbjct: 530 AGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 70/141 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + + +N+LLD CK + G L Y+ L+DGL +A R
Sbjct: 259 MQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A E++ ++L K + YT++I GL K G ++AL LLS M +G +P+ + +
Sbjct: 319 YTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNA 378
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+I++L G ++ L LEM
Sbjct: 379 VIKALCGRGLLEEGRSLQLEM 399
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 58/96 (60%)
Query: 43 PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL 102
P+L T+ ILMDGL K GR DAQ++F D+ +G TYT++I+GLC+ G D+A L
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKL 255
Query: 103 LSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLL 138
+M+ G P+++ +++ + G +A +LL
Sbjct: 256 FYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 70/146 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N +TY L+ LC+ D G PD +N L+DG CK GR
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR 283
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A E+ G+ + + Y+ +I+GL + + +A L + M + P+ I +
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI 343
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I+ L + G+ + A KLL M KG+
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGI 369
Score = 69.7 bits (169), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
Y+SL+D L ++ + ++PD+ Y IL+ GL KAG+++DA ++ +
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
KG + Y +I LC GL +E +L +M P+A T +I S+ NG
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 133 KAEKLLLEMIDKG 145
+AE++ E+ G
Sbjct: 426 EAEEIFTEIEKSG 438
Score = 69.3 bits (168), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 69/133 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+II Y L+ L K+ ++ +G+ PD YN ++ LC G L++ + +
Sbjct: 337 DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQ 396
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ T+T++I +C+ GL EA + +++E GC+P+ TF ++I L ++
Sbjct: 397 LEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
Query: 129 GENDKAEKLLLEM 141
GE +A LL +M
Sbjct: 457 GELKEARLLLHKM 469
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 58/108 (53%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + YN+++ ALC ++ + PD CT+ IL+ +C+ G
Sbjct: 364 MPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEI 108
+++A+EIF ++ G +V T+ +I+GLCK G EA LL KME+
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Score = 66.6 bits (161), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ T+ L+D L K +G+ P+ TY IL+ GLC+ G DA+++F
Sbjct: 197 NLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLF 256
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ G + + +++G CK G EA LL E +G + S+I LF
Sbjct: 257 YEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRA 316
Query: 129 GENDKAEKLLLEMIDKGL 146
+A +L M+ K +
Sbjct: 317 RRYTQAFELYANMLKKNI 334
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 5 GQPANII-----TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAG 59
G+PA++ + N D + +S + D G PD+ +YN+L++G C+AG
Sbjct: 472 GRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAG 531
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
+ A ++ + L +KG TY +INGL + G +EA L
Sbjct: 532 DIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYH--------ITVHTYTVMINGLCKE 93
+PD+ TYN+++ R+ +E+F L Y+ ++T+ ++++GL K+
Sbjct: 159 RPDVFTYNVIL-------RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKK 211
Query: 94 GLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
G +A + M G +PN +T+ +I L + G D A KL EM G
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSG 263
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +I++YN L++ C++ +D +G+ PD TYN L++GL + GR ++A
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSK-MEIEGCTPNAITFESIIR 123
++F+ + + Y ++ C++ A L K ++ C + E I
Sbjct: 572 FKLFY--AKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANE--IE 627
Query: 124 SLFENGENDKAEKLLLEM 141
F+ GE ++A + L+E+
Sbjct: 628 QCFKEGETERALRRLIEL 645
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 73.2 bits (178), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++ YN+LLDALCKS VD + G++PD ++ I + C AG + A ++
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 69 HDLLIKGYHI--TVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+ K Y + V+T+ +I LCK D+A LL +M +G P+ T+ SI+
Sbjct: 302 DRM--KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHC 359
Query: 127 ENGENDKAEKLLLEM 141
++ E ++A KLL M
Sbjct: 360 DHCEVNRATKLLSRM 374
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
DL YN L+D LCK+G + ++F ++ G +++ + I+ C G A +L
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 104 SKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
+M+ PN TF II++L +N + D A LL EMI KG
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Score = 62.8 bits (151), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG + TYNS++ C V+ PD TYN+++ L + GR
Sbjct: 342 KGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDR 401
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLC-KEGLFDEALALLSKMEIEGCTPNAITFESII 122
A EI+ + + ++ TV TYTVMI+GL K+G +EA M EG P + T E +
Sbjct: 402 ATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLR 461
Query: 123 RSLFENGENDKAEKLLLEM 141
L G+ D + L +M
Sbjct: 462 NRLVGWGQMDVVDVLAGKM 480
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 72.8 bits (177), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 69/143 (48%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG + + Y +++ C+ + +G++P+ YN+++ G K G +
Sbjct: 312 KGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISL 371
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+ ++++L GY T+ + MI G C G DEA + M G TPNAIT+ ++I+
Sbjct: 372 VEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIK 431
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ + +K KL E+ GL
Sbjct: 432 GFCKENKVEKGLKLYKELKALGL 454
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 58/131 (44%)
Query: 16 LLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKG 75
L+ ALC V QG+ P Y L+ G C+ G E+ H ++
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 76 YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAE 135
+ +++ Y +I GLC EA + ++ +G P+ + + ++IR E G A
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 136 KLLLEMIDKGL 146
KL EMI KG+
Sbjct: 339 KLWFEMIKKGM 349
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%)
Query: 43 PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL 102
P + Y ++ GLC + +A IF +L KGY YT MI G C++G A L
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 103 LSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
+M +G PN + +I F+ GE E EM+ G
Sbjct: 341 WFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNG 383
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 53/122 (43%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N YN ++ K + G + + N ++ G C G+ +
Sbjct: 347 KGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDE 406
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A EIF ++ G TY +I G CKE ++ L L +++ G P+ + + +++R
Sbjct: 407 AFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVR 466
Query: 124 SL 125
+L
Sbjct: 467 NL 468
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 72.8 bits (177), Expect = 8e-14, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G +I+TYNSL+ A + +D ++G +PD+ TY L+ G +AG+
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A IF ++ G + T+ I G F E + + ++ + G +P+ +T+ +
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ +NG + + + EM G +
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++ TYNSL+ +S +G++PD+ +YN ++ C+ R
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++DA IF ++ G V TY I + +F+EA+ ++ M GC PN T+ S
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 121 IIRSLFENGENDKAEKLLLE 140
I+ + D+A KL +E
Sbjct: 775 IVDGYCKLNRKDEA-KLFVE 793
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 70/145 (48%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + TYN+L+ + G D TYN L+D K+ R
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
K+A ++ +++++ G+ ++ TY +I+ ++G+ DEA+ L ++M +G P+ T+ +
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
++ G+ + A + EM + G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAG 414
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 67/150 (44%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++ TY +LL ++ V+ + G +P++CT+N + G+
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +IF ++ + G + T+ ++ + G+ E + +M+ G P TF +
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
+I + G ++A + M+D G+ L
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
++V G +I+T+N+LL ++ G P+ T+N L+ + G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A ++ +L G + TY ++ L + G+++++ +L++ME C PN +T+ S
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLE 148
++ + + NG+ L E + G++E
Sbjct: 565 LLHA-YANGKEIGLMHSLAEEVYSGVIE 591
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 63/142 (44%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G +I T NS++ + V ++G P + TYN LM ++
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
++EI ++L KG + +Y +I C+ +A + S+M G P+ IT+ + I
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742
Query: 124 SLFENGENDKAEKLLLEMIDKG 145
S + ++A ++ MI G
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHG 764
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 50 ILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIE 109
I++ L K GR+ A +F+ L G+ + V++YT +I+ G + EA+ + KME +
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 110 GCTPNAITFESIIRSLFENGEN-DKAEKLLLEMIDKGL 146
GC P IT+ I+ + G +K L+ +M G+
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Query: 13 YNSLLD---------ALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
Y S+LD L K V + G D+ +Y L+ +GR ++
Sbjct: 167 YQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYRE 226
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGL-FDEALALLSKMEIEGCTPNAITFESII 122
A +F + G T+ TY V++N K G +++ +L+ KM+ +G P+A T+ ++I
Sbjct: 227 AVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286
Query: 123 RSLFENGENDKAEKLLLEMIDKGL 146
+ +A ++ EM G
Sbjct: 287 TCCKRGSLHQEAAQVFEEMKAAGF 310
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V G + + Y L+ CK +++ ++ + D C +N L+ G K G
Sbjct: 263 MEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGM 322
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL-LSKMEIEGCTPNAITFE 119
L + +F ++ KG V TY +MI CKEG D AL L ++ E + N +
Sbjct: 323 LDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYT 382
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGLL 147
++I ++ G DKA LL+ M+D G++
Sbjct: 383 NLIFGFYKKGGMDKAVDLLMRMLDNGIV 410
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + Y+S++ +L K V + G+QPD Y I+++ + GR+ +A
Sbjct: 577 GLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEA 636
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ +++ + TYTV+I+G K G+ ++ L KM +G +PN + + ++I
Sbjct: 637 NELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGH 696
Query: 125 LFENGE 130
+ G+
Sbjct: 697 FLKKGD 702
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY +++ LCK + D + G++P + Y+ ++ L K GR+ +A+E F +
Sbjct: 549 TYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKM 608
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
L G Y +MIN + G DEA L+ ++ P++ T+ +I + G
Sbjct: 609 LESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMM 668
Query: 132 DKAEKLLLEMIDKGL 146
+K + L +M++ GL
Sbjct: 669 EKGCQYLDKMLEDGL 683
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF-HDL 71
+N+L+ K +D +GVQ ++ TY+I++ CK G + A +F ++
Sbjct: 310 FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNT 369
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ VH YT +I G K+G D+A+ LL +M G P+ IT+ +++ L + E
Sbjct: 370 GSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHEL 429
Query: 132 DKAEKLLLEMIDKG 145
A +L ++D G
Sbjct: 430 KYAMVILQSILDNG 443
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ +N+++ C + +D +G+ P+L TY ILM +AG ++ A ++F
Sbjct: 793 NLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ + Y+ ++ GLC +ALAL+ +M+ G PN ++E +++ L +
Sbjct: 853 EGTNCEPDQV---MYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYS 909
Query: 129 GENDKAEKLLLEM 141
+A K++ +M
Sbjct: 910 RLTMEAVKVVKDM 922
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+YNS++ L + + ++ + PD+ TY I+++ LCK A I
Sbjct: 513 FSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDA 572
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ G TV Y+ +I L K+G EA +KM G P+ I + +I + NG
Sbjct: 573 MEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGR 632
Query: 131 NDKAEKLLLEMI 142
D+A +L+ E++
Sbjct: 633 IDEANELVEEVV 644
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%)
Query: 19 ALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHI 78
ALC + + G P +YN ++ L + ++D + + + +
Sbjct: 486 ALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVP 545
Query: 79 TVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLL 138
V TY +++N LCK+ D A A++ ME G P + SII SL + G +AE+
Sbjct: 546 DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETF 605
Query: 139 LEMIDKGL 146
+M++ G+
Sbjct: 606 AKMLESGI 613
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 72.8 bits (177), Expect = 9e-14, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 7/148 (4%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G+ + ITYN+L+ K + + G+ P + TY ++D C G
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 61 LKDAQEIFHDLLIKGYHITVH----TYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAI 116
L +A ++F D+ G H V+ Y ++IN K G F +AL+L +M+++ PN
Sbjct: 632 LDEALKLFKDM---GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Query: 117 TFESIIRSLFENGENDKAEKLLLEMIDK 144
T+ ++ + L E + + KL+ EM+++
Sbjct: 689 TYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 73/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N++TY +L+ A C +V+ + G PD Y L+ GLC+ R
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
DA + L G+ + + Y ++I C + ++ +L+ ME EG P++IT+ +
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I ++ + + E+++ +M + GL
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGL 612
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXX----XDQG--VQPDLCTYNILMDGLC 56
VK +P +++T L++ LCKS VD D G ++ D +N L+DGLC
Sbjct: 323 VKIRP-DVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 57 KAGRLKDAQEIFHDL-LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNA 115
K GRLK+A+E+ + L + TY +I+G C+ G + A ++S+M+ + PN
Sbjct: 382 KVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 116 ITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+T +I+ + + + A ++M +G+
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P +N+LL L ++ + + ++PD+ T IL++ LCK+ R+ +A E
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 67 IFHDL---------LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAI 116
+F + +IK I +T +I+GLCK G EA LL +M++E C PNA+
Sbjct: 351 VFEKMRGKRTDDGNVIKADSIHFNT---LIDGLCKVGRLKEAEELLVRMKLEERCAPNAV 407
Query: 117 TFESIIRSLFENGENDKAEKLLLEM 141
T+ +I G+ + A++++ M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRM 432
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 8 ANIITYNSLLDALCKSHHV-DXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
A+ I +N+L+D LCK + + ++ P+ TYN L+DG C+AG+L+ A+E
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+ + V T ++ G+C+ + A+ ME EG N +T+ ++I +
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 127 ENGENDKAEKLLLEMIDKG 145
+KA +M++ G
Sbjct: 488 SVSNVEKAMYWYEKMLEAG 506
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +TYN L+D C++ ++ + ++P++ T N ++ G+C+ L A F
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
D+ +G V TY +I+ C ++A+ KM GC+P+A + ++I L +
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 129 GENDKAEKLLLEMIDKGL 146
+ A +++ ++ + G
Sbjct: 525 RRDHDAIRVVEKLKEGGF 542
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 72.8 bits (177), Expect = 9e-14, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 7/148 (4%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G+ + ITYN+L+ K + + G+ P + TY ++D C G
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 61 LKDAQEIFHDLLIKGYHITVH----TYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAI 116
L +A ++F D+ G H V+ Y ++IN K G F +AL+L +M+++ PN
Sbjct: 632 LDEALKLFKDM---GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Query: 117 TFESIIRSLFENGENDKAEKLLLEMIDK 144
T+ ++ + L E + + KL+ EM+++
Sbjct: 689 TYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 73/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N++TY +L+ A C +V+ + G PD Y L+ GLC+ R
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
DA + L G+ + + Y ++I C + ++ +L+ ME EG P++IT+ +
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I ++ + + E+++ +M + GL
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGL 612
Score = 67.0 bits (162), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXX----XDQG--VQPDLCTYNILMDGLC 56
VK +P +++T L++ LCKS VD D G ++ D +N L+DGLC
Sbjct: 323 VKIRP-DVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 57 KAGRLKDAQEIFHDLLIKGYHI-TVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNA 115
K GRLK+A+E+ + ++ + TY +I+G C+ G + A ++S+M+ + PN
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 116 ITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+T +I+ + + + A ++M +G+
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P +N+LL L ++ + + ++PD+ T IL++ LCK+ R+ +A E
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 67 IFHDL---------LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAI 116
+F + +IK I +T +I+GLCK G EA LL +M++E C PNA+
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNT---LIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 117 TFESIIRSLFENGENDKAEKLLLEM 141
T+ +I G+ + A++++ M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRM 432
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 8 ANIITYNSLLDALCKSHHV-DXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
A+ I +N+L+D LCK + + ++ P+ TYN L+DG C+AG+L+ A+E
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+ + V T ++ G+C+ + A+ ME EG N +T+ ++I +
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 127 ENGENDKAEKLLLEMIDKG 145
+KA +M++ G
Sbjct: 488 SVSNVEKAMYWYEKMLEAG 506
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +TYN L+D C++ ++ + ++P++ T N ++ G+C+ L A F
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
D+ +G V TY +I+ C ++A+ KM GC+P+A + ++I L +
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 129 GENDKAEKLLLEMIDKGL 146
+ A +++ ++ + G
Sbjct: 525 RRDHDAIRVVEKLKEGGF 542
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 72.4 bits (176), Expect = 9e-14, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQ--PDLCTYNILMDGLCKAG------- 59
++ YN++++ALC+ + G + PD TY IL+ C+ G
Sbjct: 199 DVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRK 258
Query: 60 ----RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNA 115
R+ +A +F ++L +G+ V TY +I+G CK AL L M+ +GC PN
Sbjct: 259 AIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQ 318
Query: 116 ITFESIIRSLFENGENDKAEKLLLEM 141
+T+ S IR E + A +++ M
Sbjct: 319 VTYNSFIRYYSVTNEIEGAIEMMRTM 344
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
+G PD+ TYN L+DG CK R+ A E+F D+ KG TY I +
Sbjct: 277 RGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 99 ALALLSKMEIEG-CTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLEK 149
A+ ++ M+ G P + T+ +I +L E +A L++EM++ GL+ +
Sbjct: 337 AIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPR 388
Score = 45.8 bits (107), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++TYN L+D CK++ + +G P+ TYN +
Sbjct: 274 MLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNE 333
Query: 61 LKDAQEIFHDLLIKGYHIT-VHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
++ A E+ + G+ + TYT +I+ L + EA L+ +M G P T++
Sbjct: 334 IEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYK 393
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGLLEK 149
+ +L G ++ L + + +G+ ++
Sbjct: 394 LVCDALSSEGLASTLDEELHKRMREGIQQR 423
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++TYN+L+ K+H ++ G+ PD+ TYNIL+ + G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A EI +L+ +G+ + +T +I G K G F EA L M P+ +T +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + +KA L +++D GL
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGL 614
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+ + Y +++D C D G P L T IL+ + G + DA+ +F
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G + V TY +++G K ++ L+ +M G +P+ T+ +I S+
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 129 GENDKAEKLLLEMIDKGLL 147
G D+A +++ E+I +G +
Sbjct: 527 GYIDEANEIISELIRRGFV 545
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G+ N + + C + D G++PD+ + + +D LCKAG
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
LK+A + L + G + + +I+G CK G +EA+ L+ + PN + S
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSS 378
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+ ++ G+ +A + E+ + GLL
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLL 405
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 62/139 (44%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P ++ T L+ A + + +G++ D+ TYN LM G K +L
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ ++ G V TY ++I+ + G DEA ++S++ G P+ + F +I
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 125 LFENGENDKAEKLLLEMID 143
+ G+ +A L M D
Sbjct: 558 FSKRGDFQEAFILWFYMAD 576
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
D ++PD+ T + L+ G CKA R++ A +F+ LL G V Y +I+G C G +
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSL----FENGENDKAEKLLLEMI 142
+A L+ M G PN T +++ L F N E A LL E+I
Sbjct: 636 KACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSET-HASMLLEEII 683
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++TYN+L+ K+H ++ G+ PD+ TYNIL+ + G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A EI +L+ +G+ + +T +I G K G F EA L M P+ +T +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + +KA L +++D GL
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGL 614
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+ + Y +++D C D G P L T IL+ + G + DA+ +F
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G + V TY +++G K ++ L+ +M G +P+ T+ +I S+
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 129 GENDKAEKLLLEMIDKGLL 147
G D+A +++ E+I +G +
Sbjct: 527 GYIDEANEIISELIRRGFV 545
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G+ N + + C + D G++PD+ + + +D LCKAG
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
LK+A + L + G + + +I+G CK G +EA+ L+ + PN + S
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSS 378
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+ ++ G+ +A + E+ + GLL
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLL 405
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 62/139 (44%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P ++ T L+ A + + +G++ D+ TYN LM G K +L
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ ++ G V TY ++I+ + G DEA ++S++ G P+ + F +I
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 125 LFENGENDKAEKLLLEMID 143
+ G+ +A L M D
Sbjct: 558 FSKRGDFQEAFILWFYMAD 576
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
D ++PD+ T + L+ G CKA R++ A +F+ LL G V Y +I+G C G +
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSL----FENGENDKAEKLLLEMI 142
+A L+ M G PN T +++ L F N E A LL E+I
Sbjct: 636 KACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSET-HASMLLEEII 683
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G NIIT+++L+D C + +G+ PD+ TY L+D K
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K+A ++ D+L G H HT+ +++G KEG A+ + + N + F
Sbjct: 495 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTC 554
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L +NG +A + +M G+
Sbjct: 555 LIEGLCQNGYILRASRFFSDMRSCGI 580
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++ + +L+D CK+ + GV P+L YN L+ G CK+G + +A +
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ V TYT++INGLC E EA L KM+ E P++ T+ S+I +
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 129 GENDKAEKLLLEMIDKGL 146
++A L EM G+
Sbjct: 423 YNMEQALDLCSEMTASGV 440
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+ YN L+ CKS ++ + PD+ TY IL++GLC ++ +A
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+F + + + TY +I+G CKE ++AL L S+M G PN ITF ++I
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
+ A L EM KG++
Sbjct: 454 YCNVRDIKAAMGLYFEMTIKGIV 476
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYNSL+ CK ++++ GV+P++ T++ L+DG C +K A ++ ++
Sbjct: 411 TYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
IKG V TYT +I+ KE EAL L S M G PN TF ++ ++ G
Sbjct: 471 TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N+ TY++++D CK+ +V + P++ + L+DG CKA
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A+ +F ++ G ++ Y +I+G CK G EA+ LLS+ME +P+ T+
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+I L + +A +L +M
Sbjct: 380 LINGLCIEDQVAEANRLFQKM 400
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ TY L++ LC V ++ + P TYN L+ G CK ++ A ++
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G + T++ +I+G C A+ L +M I+G P+ +T+ ++I + F+
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 129 GENDKAEKLLLEMIDKGL 146
+A +L +M++ G+
Sbjct: 493 ANMKEALRLYSDMLEAGI 510
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+ Y + LC+ + ++ GV P+L TY+ ++DG CK G ++ A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ ++L+ V + +++G CK A +L M G PN + +I
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 125 LFENGENDKAEKLLLEM 141
++G +A LL EM
Sbjct: 349 HCKSGNMLEAVGLLSEM 365
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 57/107 (53%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G++P++ Y I + LC+ ++++A+++F + G ++TY+ MI+G CK G +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
L ++ + PN + F +++ + E A L + M+ G+
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%)
Query: 15 SLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIK 74
S+L+ L + D +G+ PD+ Y +L K G +++ ++
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 75 GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKA 134
G V+ YT+ I LC++ +EA + M+ G PN T+ ++I + G +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 135 EKLLLEMIDKGLL 147
L E++ LL
Sbjct: 289 YGLYKEILVAELL 301
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
+ G+P N+ YN++++ KS +D + +PD+CT+NIL++G C++ +
Sbjct: 187 IDGKP-NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFD 245
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
A ++F ++ KG V ++ +I G G +E + + +M GC + T E ++
Sbjct: 246 LALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILV 305
Query: 123 RSLFENGENDKAEKLLLEMIDKGLL 147
L G D A L+L++++K +L
Sbjct: 306 DGLCREGRVDDACGLVLDLLNKRVL 330
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 73/147 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N++++N+L+ S ++ + G + T IL+DGLC+ GR
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR 313
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ DA + DLL K + Y ++ LC E A+ ++ ++ +G TP I +
Sbjct: 314 VDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
++ L ++G +KA + +M++ G+L
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGIL 400
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 74/137 (54%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ T+N L++ C+S D ++G +P++ ++N L+ G +G++++ ++
Sbjct: 227 DVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMA 286
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++++ G + T ++++GLC+EG D+A L+ + + P+ + S++ L
Sbjct: 287 YEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGE 346
Query: 129 GENDKAEKLLLEMIDKG 145
+ +A +++ E+ KG
Sbjct: 347 NKAVRAMEMMEELWKKG 363
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 62/136 (45%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KGQ I +L++ L KS + + G+ PD T+N+L+ LC + D
Sbjct: 362 KGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTD 421
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A + KGY TY V+++G KEG E L+++M + P+ T+ ++
Sbjct: 422 ANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMD 481
Query: 124 SLFENGENDKAEKLLL 139
L G+ + + +L
Sbjct: 482 GLSCTGKFSRKQVRML 497
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 58/130 (44%)
Query: 16 LLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKG 75
L+D LC+ VD ++ V P Y L++ LC + A E+ +L KG
Sbjct: 304 LVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKG 363
Query: 76 YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAE 135
T ++ GL K G ++A + KM G P+++TF ++R L + + A
Sbjct: 364 QTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDAN 423
Query: 136 KLLLEMIDKG 145
+L L KG
Sbjct: 424 RLRLLASSKG 433
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 56/135 (41%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
Y SL++ LC + +G P L++GL K+GR + A ++
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMM 395
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
G T+ +++ LC +A L +G P+ T+ ++ + G
Sbjct: 396 NAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRK 455
Query: 133 KAEKLLLEMIDKGLL 147
+ E L+ EM+DK +L
Sbjct: 456 EGEVLVNEMLDKDML 470
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 70/137 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I++YN+L+ ALC+ + ++G++PD+ T+N L+ G+ + +EI+
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K I + TY + GL E E + L +++ G P+ +F ++IR
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 129 GENDKAEKLLLEMIDKG 145
G+ D+AE E++ G
Sbjct: 299 GKMDEAEAWYKEIVKHG 315
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG +I+T+N+LL + + ++ V D+ TYN + GL + K+
Sbjct: 209 KGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKE 268
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+F +L G V ++ MI G EG DEA A ++ G P+ TF ++
Sbjct: 269 LVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLP 328
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
++ + G+ + A +L E K L
Sbjct: 329 AMCKAGDFESAIELFKETFSKRYL 352
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 62/130 (47%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I TYN+ L L G++PD+ ++N ++ G G++ +A+ +
Sbjct: 249 DIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWY 308
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ GY T+ +++ +CK G F+ A+ L + + T + ++ L +
Sbjct: 309 KEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKG 368
Query: 129 GENDKAEKLL 138
+ ++AE+++
Sbjct: 369 SKREEAEEIV 378
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIK-GYHITVHTYTVMINGLCKEGLFDEALAL 102
+ ++N L+ + + +E+F++L K + +Y +I LC++ EA+AL
Sbjct: 143 SVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVAL 202
Query: 103 LSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
L ++E +G P+ +TF +++ S + G+ + E++ +M++K +
Sbjct: 203 LDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNV 246
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G+ + ITYN+L+ K + + G+ P + TY ++D C G
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 61 LKDAQEIFHDLLIKGYHITVH----TYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAI 116
L +A ++F D+ G H V+ Y ++IN K G F +AL+L +M+++ PN
Sbjct: 632 LDEALKLFKDM---GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Query: 117 TFESIIRSLFENGENDKAEKLLLEMID 143
T+ ++ + L E + + KL+ EM++
Sbjct: 689 TYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 73/146 (50%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N++TY +L+ A C +V+ + G PD Y L+ GLC+ R
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
DA + L G+ + + Y ++I C + ++ +L+ ME EG P++IT+ +
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I ++ + + E+++ +M + GL
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGL 612
Score = 66.6 bits (161), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXX----XDQG--VQPDLCTYNILMDGLC 56
VK +P +++T L++ LCKS VD D G ++ D +N L+DGLC
Sbjct: 323 VKIRP-DVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 57 KAGRLKDAQEIFHDLLIKGYHI-TVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNA 115
K GRLK+A+E+ + ++ + TY +I+G C+ G + A ++S+M+ + PN
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 116 ITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+T +I+ + + + A ++M +G+
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P +N+LL L ++ + + ++PD+ T IL++ LCK+ R+ +A E
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 67 IFHDL---------LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAI 116
+F + +IK I +T +I+GLCK G EA LL +M++E C PNA+
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNT---LIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 117 TFESIIRSLFENGENDKAEKLLLEM 141
T+ +I G+ + A++++ M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRM 432
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 8 ANIITYNSLLDALCKSHHV-DXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
A+ I +N+L+D LCK + + ++ P+ TYN L+DG C+AG+L+ A+E
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+ + V T ++ G+C+ + A+ ME EG N +T+ ++I +
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 127 ENGENDKAEKLLLEMIDKG 145
+KA +M++ G
Sbjct: 488 SVSNVEKAMYWYEKMLEAG 506
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +TYN L+D C++ ++ + ++P++ T N ++ G+C+ L A F
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
D+ +G V TY +I+ C ++A+ KM GC+P+A + ++I L +
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 129 GENDKAEKLLLEMIDKGL 146
+ A +++ ++ + G
Sbjct: 525 RRDHDAIRVVEKLKEGGF 542
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 9 NIITYNSLLDALCKSHHVDXXXX---XXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
N++++N ++D CK+ + V P+ TYN +++G CKAGRL A+
Sbjct: 252 NVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAE 311
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
I D++ G TY +++ + G DEAL L +M +G N + + SI+ L
Sbjct: 312 RIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWL 371
Query: 126 FENGENDKAEKLLLEMIDKGL 146
F G+ + A +L +M K +
Sbjct: 372 FMEGDIEGAMSVLRDMNSKNM 392
Score = 63.2 bits (152), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
N+ + L + +D G ++ T+N+++ CK +L +A +F+ +L
Sbjct: 187 NNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLK 246
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG---CTPNAITFESIIRSLFENGE 130
G V ++ +MI+G CK G AL LL KM + +PNA+T+ S+I + G
Sbjct: 247 CGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGR 306
Query: 131 NDKAEKLLLEMIDKGL 146
D AE++ +M+ G+
Sbjct: 307 LDLAERIRGDMVKSGV 322
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
+ +N++ YNS+++ L K + D+ TYN L++ K G +++A
Sbjct: 497 KTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEAD 552
Query: 66 EIFHDLLIKG--YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+I + + +++ T+ +MIN LCK G +++A +L M G P++IT+ ++I
Sbjct: 553 DILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLIT 612
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
S ++ +K +L +I +G+
Sbjct: 613 SFSKHRSQEKVVELHDYLILQGV 635
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 66/142 (46%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +TYNS+++ CK+ +D GV + TY L+D +AG +A +
Sbjct: 290 NAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLC 349
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ KG + Y ++ L EG + A+++L M + + T ++R L N
Sbjct: 350 DEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRN 409
Query: 129 GENDKAEKLLLEMIDKGLLEKL 150
G +A + ++ +K L+E +
Sbjct: 410 GYVKEAVEFQRQISEKKLVEDI 431
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPD--LCTYNILMDGLCKAGRLKDAQE 66
+I+TYN+LL+ K+ +V+ Q + L T+NI+++ LCK G + A+E
Sbjct: 531 DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKE 590
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+ ++ +G TY +I K ++ + L + ++G TP+ + SI+R L
Sbjct: 591 VLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLL 650
Query: 127 --ENG 129
ENG
Sbjct: 651 DRENG 655
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V+G + I++ +L+D K ++ +L YN +++GL K G
Sbjct: 457 MLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGM 516
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNA--ITF 118
A+ + + + IK + TY ++N K G +EA +LSKM+ + + +TF
Sbjct: 517 AGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTF 572
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L + G +KA+++L M+++G++
Sbjct: 573 NIMINHLCKFGSYEKAKEVLKFMVERGVV 601
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 63/141 (44%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M+ K + T ++ LC++ +V ++ + D+ +N LM + +
Sbjct: 387 MNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKK 446
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A +I +L++G + ++ +I+G KEG + AL + M T N + + S
Sbjct: 447 LACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNS 506
Query: 121 IIRSLFENGENDKAEKLLLEM 141
I+ L + G AE ++ M
Sbjct: 507 IVNGLSKRGMAGAAEAVVNAM 527
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQ-GVQPDLCTYNILMDGLCKAGRLK 62
K P + TYN LL LCK + D V+PDL ++ IL+D +C + L+
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+A + L G+ Y ++ G C EA+ + KM+ EG P+ IT+ ++I
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 123 RSLFENGENDKAEKLLLEMIDKG 145
L + G ++A L M+D G
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAG 330
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
+++++ L+D +C S ++ + G +PD YN +M G C + +A +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+ + +G TY +I GL K G +EA L M G P+ T+ S++ +
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 128 NG 129
G
Sbjct: 348 KG 349
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A++ITY+++++A + +++ GV+PD Y+IL G +A K A+E+
Sbjct: 353 ADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 412
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
L+++ V +T +I+G C G D+A+ + +KM G +PN TFE+++ E
Sbjct: 413 LETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE 471
Query: 128 NGENDKAEKLLLEM 141
+ KAE++L M
Sbjct: 472 VKQPWKAEEVLQMM 485
Score = 62.8 bits (151), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + I +N++++A +S +++ + G+ P TYN L+ G AG+ + +
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 65 QEIFHDLLIKGYHITV----HTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
E+ DL+++ ++ V T+ V++ CK+ +EA ++ KME G P+ +T+ +
Sbjct: 170 SELL-DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 121 IIRSLFENGENDKAEKLLLE 140
I + GE +AE ++E
Sbjct: 229 IATCYVQKGETVRAESEVVE 248
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ-EI 67
NI T+N L+ A CK V+ + GV+PD TYN + + G A+ E+
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 68 FHDLLIK-GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+++K T +++ G C+EG + L + +M+ N + F S+I
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 127 ENGENDKAEKLLLEMI 142
E + D +++ L ++
Sbjct: 307 EVMDRDGIDEVTLTLL 322
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
V+ D+ TY+ +M+ AG ++ A ++F +++ G H Y+++ G + +A
Sbjct: 351 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 410
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
LL + +E PN + F ++I NG D A ++ +M G+
Sbjct: 411 ELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGV 455
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 51 LMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG 110
LM+ L + GR +AQ +F L G+ ++ +YT ++ + + + +++S++E G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 111 CTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
++I F ++I + E+G + A + LL+M + GL
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGL 146
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A++ITY+++++A + +++ GV+PD Y+IL G +A K A+E+
Sbjct: 328 ADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 387
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
L+++ V +T +I+G C G D+A+ + +KM G +PN TFE+++ E
Sbjct: 388 LETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE 446
Query: 128 NGENDKAEKLLLEM 141
+ KAE++L M
Sbjct: 447 VKQPWKAEEVLQMM 460
Score = 62.8 bits (151), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + I +N++++A +S +++ + G+ P TYN L+ G AG+ + +
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 65 QEIFHDLLIKGYHITV----HTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
E+ DL+++ ++ V T+ V++ CK+ +EA ++ KME G P+ +T+ +
Sbjct: 170 SELL-DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 121 IIRSLFENGENDKAEKLLLE 140
I + GE +AE ++E
Sbjct: 229 IATCYVQKGETVRAESEVVE 248
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
AN++ +NSL++ + D + V+ D+ TY+ +M+ AG ++ A ++
Sbjct: 293 ANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 352
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F +++ G H Y+++ G + +A LL + +E PN + F ++I
Sbjct: 353 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCS 411
Query: 128 NGENDKAEKLLLEMIDKGL 146
NG D A ++ +M G+
Sbjct: 412 NGSMDDAMRVFNKMCKFGV 430
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ-EI 67
NI T+N L+ A CK V+ + GV+PD TYN + + G A+ E+
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 68 FHDLLIK-GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+++K T +++ G C+EG + L + +M+ N + F S+I
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 127 ENGENDKAEKLLLEM 141
E + D +++L M
Sbjct: 307 EVMDRDGIDEVLTLM 321
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 51 LMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG 110
LM+ L + GR +AQ +F L G+ ++ +YT ++ + + + +++S++E G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 111 CTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
++I F ++I + E+G + A + LL+M + GL
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGL 146
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 71/142 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G+ I T + L LC+ D +G +L +Y++++ LCKAGR++++
Sbjct: 357 GKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRES 416
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ +G V Y +I CK + A L +M +EGC N T+ +IR
Sbjct: 417 YTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRK 476
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L E GE +++ +L +M+++G+
Sbjct: 477 LSEEGEAEESLRLFDKMLERGI 498
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 76/141 (53%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG + + +Y+ ++ LCK+ V +G+ PD+ YN L++ CKA ++
Sbjct: 391 KGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRP 450
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A++++ ++ ++G + + TY V+I L +EG +E+L L KM G P+ + S+I
Sbjct: 451 AKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIE 510
Query: 124 SLFENGENDKAEKLLLEMIDK 144
L + + + A ++ + +++
Sbjct: 511 GLCKETKIEAAMEVFRKCMER 531
Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++ YN+L++A CK+ + +G + +L TYN+L+ L + G
Sbjct: 423 MKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGE 482
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSK-MEIEGCTPNAITFE 119
+++ +F +L +G Y +I GLCKE + A+ + K ME + T
Sbjct: 483 AEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLS 542
Query: 120 SIIRSLFENGENDKAEKLLLE 140
+ +L NG + +A +LL E
Sbjct: 543 EFVLNLCSNGHSGEASQLLRE 563
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 68/134 (50%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN ++D K + +D +G++PD T+N L+D CK GR A+E+F +
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
+G TY +MIN + +D+ LL KM+ +G PN +T +++ ++G +
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 133 KAEKLLLEMIDKGL 146
A + L EM GL
Sbjct: 567 DAIECLEEMKSVGL 580
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G A T S++ AL S G++P YN L+ G K G LKDA
Sbjct: 299 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 358
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + ++ +G HTY+++I+ G ++ A +L +ME PN+ F ++
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ GE K ++L EM G+
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGV 440
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 62/135 (45%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN ++++ D QG+ P++ T+ L+D K+GR DA E ++
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G + Y +IN + GL ++A+ M +G P+ + S+I + E+ +
Sbjct: 576 KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRD 635
Query: 132 DKAEKLLLEMIDKGL 146
+A +L M + G+
Sbjct: 636 AEAFAVLQYMKENGV 650
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 52/108 (48%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
GV+PD YN+++D K L A F +L +G T+ +I+ CK G A
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
+ ME GC P A T+ +I S + D ++LL +M +G+L
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 68/150 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + +T+N+L+D CK +G P TYNI+++ R
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
D + + + +G V T+T +++ K G F++A+ L +M+ G P++ + +
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
+I + + G +++A M GL L
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSL 619
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 64/145 (44%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N++T+ +L+D KS + G++P YN L++ + G
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A F + G ++ +IN ++ EA A+L M+ G P+ +T+ +
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
++++L + K + EMI G
Sbjct: 660 LMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ--EIF 68
+TYN+L+ A +++ ++ G Q D Y++++ L ++ ++ ++
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ + V +I G K G +AL LL + G + T SII +L ++
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 129 GENDKAEKLLLEMIDKGL 146
G +AE L E+ G+
Sbjct: 318 GRTLEAEALFEELRQSGI 335
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG N++TYNSL+ LCK+ + ++G+ P + TY+ M L+
Sbjct: 367 KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR------ILRT 420
Query: 64 AQEIFHDLLIK----GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
+E+F +LL K G TV TY ++I LC+ FD L L +M+ + P+ ++
Sbjct: 421 GEEVF-ELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYI 479
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGL 146
+I LF NG+ ++A EM DKG+
Sbjct: 480 VMIHGLFLNGKIEEAYGYYKEMKDKGM 506
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
GV+ D+ +Y+ ++ K G L ++F + + Y +++ L K EA
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 100 LALLSKMEIE-GCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
L+ ME E G PN +T+ S+I+ L + + ++A+++ EM++KGL
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLF 405
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+ +YN L++A C + +GV D+ YN ++ GLC + A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+E+F D+ +KG T TY ++NG CK G D L + +M+ +G + +T E+++
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 125 LFENGENDK 133
L ++ + +
Sbjct: 396 LCDDRDGQR 404
Score = 59.7 bits (143), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQ-GVQPDLCTYNILMDGLCKAGRLKDAQEI 67
N T+NS++ + + + ++ G P++ +YN+LM+ C G + +A+++
Sbjct: 244 NATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKV 303
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+ ++ ++G + Y MI GLC +A L M ++G +T+E ++ +
Sbjct: 304 WEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCK 363
Query: 128 NGENDKAEKLLLEMIDKGL 146
G+ D + EM KG
Sbjct: 364 AGDVDSGLVVYREMKRKGF 382
Score = 56.2 bits (134), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLC---K 57
M +KG +TY L++ CK+ VD +G + D T L++GLC
Sbjct: 342 MGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD 401
Query: 58 AGRLKDAQEIFHDLLIKG-YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAI 116
R+ +A +I D + + ++ + + Y +++ LC++G D AL + ++M +G P+
Sbjct: 402 GQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQE 461
Query: 117 TFESIIRSLFENGENDKAEKLLLEMID 143
T+ + I G+ + + L +EM +
Sbjct: 462 TYRAFIDGYGIVGDEETSALLAIEMAE 488
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 70.9 bits (172), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 71/143 (49%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + YN ++DAL K+ + D + G+ + T+ IL+ GLCKAGR+++
Sbjct: 223 GFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEM 282
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
EI + V YT MI L EG D +L + +M + P+ + + +++
Sbjct: 283 LEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVG 342
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
L ++G ++ +L +EM K +L
Sbjct: 343 LCKDGRVERGYELFMEMKGKQIL 365
Score = 53.5 bits (127), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 61/138 (44%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ Y +++ L ++D ++PD+ Y L+ GLCK GR++ E+F
Sbjct: 297 DVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELF 356
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K I Y V+I G +G A L + G + + ++I+ L
Sbjct: 357 MEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSV 416
Query: 129 GENDKAEKLLLEMIDKGL 146
+ DKA KL I++ L
Sbjct: 417 NQVDKAYKLFQVAIEEEL 434
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 50/114 (43%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++ Y +L+ LCK V+ + + D Y +L++G G+++ A ++
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
DL+ GY + Y +I GLC D+A L E P+ T I+
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIM 445
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +++T+++L++A + + G+ PD+ ++IL G +AG + A
Sbjct: 596 GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKA 655
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM-EIEGCTPNAITFESIIR 123
++I + + G V YT +I+G C G +A+ + KM I G +PN T+E++I
Sbjct: 656 EQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIW 715
Query: 124 SLFENGENDKAEKLLLEMIDKGLL 147
E + KAE+LL +M K ++
Sbjct: 716 GFGEAKQPWKAEELLKDMEGKNVV 739
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+ +NSL+ + +D + GV+PD+ T++ LM+ G +K
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+EI+ D+L G +H ++++ G + G ++A +L++M G PN + + II
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Query: 125 LFENGENDKAEKLLLEM 141
GE KA ++ +M
Sbjct: 681 WCSAGEMKKAMQVYKKM 697
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 62/102 (60%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
D+ + LM+GL + GR ++A IF+ L+ +G+ ++ TYT ++ L ++ F L+L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 104 SKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
SK+E G P+ I F +II + E+G D+A K+ +M + G
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 419
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + I +N++++A +S ++D + G +P T+N L+ G K G+L+++
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 65 QEIFHDLLIKGYHITVHTYT--VMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+ D++++ + + T +++ C + +EA ++ KM+ G P+ +TF ++
Sbjct: 444 SRLL-DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 123 RSLFENGENDKAEKLLL 139
++ G AE +++
Sbjct: 503 KAYARIGSTCTAEDMII 519
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G ++ITY +L+ AL + H G++PD +N +++ ++G L
Sbjct: 348 EGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQ 407
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM-EIEGCTPNAITFESII 122
A +IF + G T T+ +I G K G +E+ LL M E PN T ++
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 123 RSLFENGENDKAEKLLLEMIDKGL 146
++ + ++A ++ +M G+
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGV 491
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCK-SHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAG 59
M G +++T+N+L A + V+P++ T +++G C+ G
Sbjct: 486 MQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEG 545
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
++++A F+ + G H + + +I G D ++ ME G P+ +TF
Sbjct: 546 KMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS 605
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGL 146
+++ + G+ + E++ +M++ G+
Sbjct: 606 TLMNAWSSVGDMKRCEEIYTDMLEGGI 632
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 67/145 (46%)
Query: 2 HVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
++ GQ +++ YN ++ A K+ + +QG PD CTYN L L +
Sbjct: 507 NMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLV 566
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
+AQ I ++L G TY MI + GL +A+ L ME G PN + + S+
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSL 626
Query: 122 IRSLFENGENDKAEKLLLEMIDKGL 146
I E+G ++A + M + G+
Sbjct: 627 INGFAESGMVEEAIQYFRMMEEHGV 651
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 62/143 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + TYNSL L VD D G +P TY ++ + G
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L DA +++ + G Y +ING + G+ +EA+ ME G N I S
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 121 IIRSLFENGENDKAEKLLLEMID 143
+I++ + G ++A ++ +M D
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKD 683
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 47 TYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM 106
T+N L+D KAGRL DA +F ++L G I T+ MI+ G EA +LL KM
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 107 EIEGCTPNAITFESIIRSLFENGENDKA 134
E +G +P+ T+ +I+ SL + + +A
Sbjct: 367 EEKGISPDTKTY-NILLSLHADAGDIEA 393
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP N +TYN L+ + ++++++ + G +PD TY L+D KAG L A
Sbjct: 396 QP-NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+++ + G TY+V+IN L K G A L +M +GCTPN +T+ +I+ L
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY-NIMMDL 513
Query: 126 FENGEN-DKAEKLLLEMIDKGL 146
N A KL +M + G
Sbjct: 514 HAKARNYQNALKLYRDMQNAGF 535
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 62/139 (44%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY +++ L ++ G QP+ TYN L+ +A L +A +F+ +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G TY +I+ K G D A+ + +M+ G +P+ T+ II L + G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 132 DKAEKLLLEMIDKGLLEKL 150
A KL EM+D+G L
Sbjct: 486 PAAHKLFCEMVDQGCTPNL 504
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 72/146 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + TY+ +++ L K+ H+ DQG P+L TYNI+MD KA
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++A +++ D+ G+ TY++++ L G +EA A+ ++M+ + P+ +
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + G +KA + M+ GL
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGL 605
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 71/144 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + +TY +L+D K+ +D G+ PD TY+++++ L KAG
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A ++F +++ +G + TY +M++ K + AL L M+ G P+ +T+
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
++ L G ++AE + EM K
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 69/147 (46%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G N++TYN ++D K+ + + G +PD TY+I+M+ L G L++
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+ +F ++ K + Y ++++ K G ++A M G PN T S++
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 124 SLFENGENDKAEKLLLEMIDKGLLEKL 150
+ + +A +LL M+ GL L
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSL 644
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP N +TYN L+ + ++++++ + G +PD TY L+D KAG L A
Sbjct: 396 QP-NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+++ + G TY+V+IN L K G A L +M +GCTPN +T+ +I+ L
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY-NIMMDL 513
Query: 126 FENGEN-DKAEKLLLEMIDKGL 146
N A KL +M + G
Sbjct: 514 HAKARNYQNALKLYRDMQNAGF 535
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 62/139 (44%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY +++ L ++ G QP+ TYN L+ +A L +A +F+ +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G TY +I+ K G D A+ + +M+ G +P+ T+ II L + G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 132 DKAEKLLLEMIDKGLLEKL 150
A KL EM+D+G L
Sbjct: 486 PAAHKLFCEMVDQGCTPNL 504
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 72/146 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + TY+ +++ L K+ H+ DQG P+L TYNI+MD KA
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++A +++ D+ G+ TY++++ L G +EA A+ ++M+ + P+ +
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + G +KA + M+ GL
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGL 605
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 71/144 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + +TY +L+D K+ +D G+ PD TY+++++ L KAG
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A ++F +++ +G + TY +M++ K + AL L M+ G P+ +T+
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
++ L G ++AE + EM K
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 69/147 (46%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G N++TYN ++D K+ + + G +PD TY+I+M+ L G L++
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+ +F ++ K + Y ++++ K G ++A M G PN T S++
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 124 SLFENGENDKAEKLLLEMIDKGLLEKL 150
+ + +A +LL M+ GL L
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSL 644
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP N +TYN L+ + ++++++ + G +PD TY L+D KAG L A
Sbjct: 396 QP-NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+++ + G TY+V+IN L K G A L +M +GCTPN +T+ +I+ L
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY-NIMMDL 513
Query: 126 FENGEN-DKAEKLLLEMIDKGL 146
N A KL +M + G
Sbjct: 514 HAKARNYQNALKLYRDMQNAGF 535
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 62/139 (44%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY +++ L ++ G QP+ TYN L+ +A L +A +F+ +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G TY +I+ K G D A+ + +M+ G +P+ T+ II L + G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 132 DKAEKLLLEMIDKGLLEKL 150
A KL EM+D+G L
Sbjct: 486 PAAHKLFCEMVDQGCTPNL 504
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 72/146 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + TY+ +++ L K+ H+ DQG P+L TYNI+MD KA
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++A +++ D+ G+ TY++++ L G +EA A+ ++M+ + P+ +
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + G +KA + M+ GL
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGL 605
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 71/144 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + +TY +L+D K+ +D G+ PD TY+++++ L KAG
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A ++F +++ +G + TY +M++ K + AL L M+ G P+ +T+
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
++ L G ++AE + EM K
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 69/147 (46%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G N++TYN ++D K+ + + G +PD TY+I+M+ L G L++
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+ +F ++ K + Y ++++ K G ++A M G PN T S++
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 124 SLFENGENDKAEKLLLEMIDKGLLEKL 150
+ + +A +LL M+ GL L
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSL 644
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N +TYN L+ + +++++ + G +PD TY L+D KAG L A
Sbjct: 389 GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA 448
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+++ + G TY+V+IN L K G A L +M +GCTPN +TF +I+ +
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTF-NIMIA 507
Query: 125 LFENGEN-DKAEKLLLEMIDKGL 146
L N + A KL +M + G
Sbjct: 508 LHAKARNYETALKLYRDMQNAGF 530
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 71/144 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + +TY +L+D K+ +D + G+ PD TY+++++ L KAG
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A +F +++ +G + T+ +MI K ++ AL L M+ G P+ +T+
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
++ L G ++AE + EM K
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRK 563
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 62/139 (44%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY +++ L ++ G +P+ TYN L+ +A LK+A +F+ +
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G TY +I+ K G D A+ + +M+ G +P+ T+ II L + G
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 132 DKAEKLLLEMIDKGLLEKL 150
A +L EM+ +G L
Sbjct: 481 PAAHRLFCEMVGQGCTPNL 499
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 66/143 (46%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G N++T+N ++ K+ + + + G QPD TY+I+M+ L G L++
Sbjct: 493 QGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEE 552
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A+ +F ++ K + Y ++++ K G D+A M G PN T S++
Sbjct: 553 AEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLS 612
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ +A LL M+ GL
Sbjct: 613 TFLRVHRMSEAYNLLQSMLALGL 635
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 68/146 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + TY+ +++ L K+ H+ QG P+L T+NI++ KA
Sbjct: 455 MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARN 514
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A +++ D+ G+ TY++++ L G +EA + ++M+ + P+ +
Sbjct: 515 YETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGL 574
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ + G DKA + M+ GL
Sbjct: 575 LVDLWGKAGNVDKAWQWYQAMLQAGL 600
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P + +YN ++ K V+ + G PD +Y+ L++GL + GR+ D+ E
Sbjct: 252 PFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVE 311
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
IF ++ KG + Y MI FDE++ +M E C PN T+ ++ L
Sbjct: 312 IFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLI 371
Query: 127 ENGENDKAEKLLLEMIDKGLL 147
+ + A ++ EM+ +G+L
Sbjct: 372 KGRKVSDALEIFEEMLSRGVL 392
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 62/142 (43%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG + YN+++ + D D+ +P+L TY+ L+ GL K ++ D
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A EIF ++L +G T T + LC G A+ + K GC + ++ +++
Sbjct: 379 ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLK 438
Query: 124 SLFENGENDKAEKLLLEMIDKG 145
L G+ + EM + G
Sbjct: 439 RLSRFGKCGMLLNVWDEMQESG 460
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 56/125 (44%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+ YN DAL K V+ +G+ PD+ Y L+ G C G+ DA ++ +
Sbjct: 397 VCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIE 456
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ G + Y V+ GL GL EA L ME G P +T +I L + GE
Sbjct: 457 MDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE 516
Query: 131 NDKAE 135
DKAE
Sbjct: 517 LDKAE 521
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 56/106 (52%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
V+PD+ Y +L+D CK G L +A+ IF ++ G YT +I CK G EA
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+ +M G P+ + + ++I NG KA KL+ EM++KG+
Sbjct: 817 MIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 69/146 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M K + N + +S+L C+ + + + D YN+ D L K G+
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A E+F ++ KG V YT +I G C +G +A L+ +M+ G TP+ + +
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+ L NG +A + L M ++G+
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGV 497
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ Y L+D CK + + GV PD Y L+ CK G LK+A+ IF
Sbjct: 760 DVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIF 819
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
++ G V YT +I G C+ G +A+ L+ +M +G P + ++
Sbjct: 820 DRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 13 YNSLLDALC-KSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
Y +L +LC + ++ GV+P+ Y L+ C+ ++ A+E F L
Sbjct: 567 YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEIL 626
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ K + TYT+MIN C+ +A AL M+ P+ +T+ ++ S
Sbjct: 627 VTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 6/146 (4%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G+ +I+ YN L L + ++GV+P T+N++++GL AG
Sbjct: 457 MDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE 516
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A+ + L H + M+ G C G D A ++E P ++ F
Sbjct: 517 LDKAEAFYESL----EHKSRENDASMVKGFCAAGCLDHAFERFIRLEFP--LPKSVYFTL 570
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
E KA+ LL M G+
Sbjct: 571 FTSLCAEKDYISKAQDLLDRMWKLGV 596
Score = 46.6 bits (109), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 60/136 (44%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
I Y ++ LC ++ G+ PD+ Y+ +++G K + A ++F+
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+L K I + ++ C+ G F EA L + + + + + +L + G+
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 131 NDKAEKLLLEMIDKGL 146
++A +L EM KG+
Sbjct: 412 VEEAIELFREMTGKGI 427
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP+ ++TYNSL+ LC++ + + ++P+ T+ +LM GLC G +A+
Sbjct: 218 QPS-VVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
++ D+ +G + Y ++++ L K G DEA LL +M+ P+ + + ++ L
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 126 FENGENDKAEKLLLEMIDKG 145
+A ++L EM KG
Sbjct: 337 CTECRVPEAYRVLTEMQMKG 356
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++ Y L+ L K +D + ++PD+ YNIL++ LC R
Sbjct: 282 MEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A + ++ +KG TY +MI+G C+ FD L +L+ M P TF
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC 401
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ L + G D A +L M K L
Sbjct: 402 MVAGLIKGGNLDHACFVLEVMGKKNL 427
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
I + N+L++ L + ++ D ++P+ ++NIL+ G + A ++F
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFD 210
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
++L +V TY +I LC+ +A +LL M + PNA+TF +++ L G
Sbjct: 211 EMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKG 270
Query: 130 ENDKAEKLLLEMIDKG 145
E ++A+KL+ +M +G
Sbjct: 271 EYNEAKKLMFDMEYRG 286
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++I +NS+L A C++ + +G+ P L T+NIL+ G + G+ A ++
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ G V T+T MI+GL G+ +AL + KM + G PNA+T S + +
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA 361
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G N +T S + A ++ G D+ N L+D K G+
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L+DA+++F + K V+T+ MI G C+ G +A L ++M+ PN IT+ +
Sbjct: 403 LEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNT 458
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEK 149
+I +NG+ +A L M G +++
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQR 487
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ T+NS++ C++ + D ++P++ T+N ++ G K G +A ++F
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 69 HDLLIKG-YHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+ G T+ ++I G + G DEAL L KM+ PN++T S++
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++ NSL+D K ++ D D+ T+N ++ G C+AG A E+F
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVF----DSVKNKDVYTWNSMITGYCQAGYCGKAYELF 441
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAITFESIIRSLFE 127
+ + T+ MI+G K G EA+ L +ME +G N T+ II +
Sbjct: 442 TRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Query: 128 NGENDKAEKLLLEM 141
NG+ D+A +L +M
Sbjct: 502 NGKKDEALELFRKM 515
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + + NS+L K +D ++ D+ +N ++ C+ G+ ++A
Sbjct: 211 GMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEA 266
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E+ ++ +G + T+ ++I G + G D A+ L+ KME G T + T+ ++I
Sbjct: 267 VELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISG 326
Query: 125 LFENGENDKAEKLLLEMIDKGLL 147
L NG +A + +M G++
Sbjct: 327 LIHNGMRYQALDMFRKMFLAGVV 349
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL-LIKGYHITVHTYTVMINGLCKEGLF 96
D G++PD+ N L+ G + + DA IFH + ++ TY +I+GLC +G
Sbjct: 281 DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRT 340
Query: 97 DEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
A LLS+M+ +G PN ++ S++ + +GE D A K L EMI+ G
Sbjct: 341 INARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 59/108 (54%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
+P+ TY+ L+ GLC GR +A+E+ ++ KG+ +Y ++N G D+A+
Sbjct: 321 EPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVK 380
Query: 102 LLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLEK 149
L +M G + I++ +++ G+ D+A +LL + +K L+++
Sbjct: 381 CLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDR 428
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G P TYN+L+ A C S ++ +GV P+ TY+I++ L + R K+A
Sbjct: 332 GFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEA 391
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
E++ + + TV TY +M+ C + D A+ + +M+ +G P F S+I +
Sbjct: 392 YEVYQTMSCEP---TVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA 448
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + D+A + EM+D G+
Sbjct: 449 LCHENKLDEACEYFNEMLDVGI 470
Score = 60.1 bits (144), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
+N +LD L KS +V + +PD+ +Y IL++G + L E+ ++
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMK 259
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL-FENGEN 131
+G+ V Y ++IN CK ++EA+ ++ME C P+ F S+I L E N
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 132 DKAE 135
D E
Sbjct: 320 DALE 323
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 67/138 (48%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+I +Y LL+ + ++ D+G +PD+ Y I+++ CKA + ++A F
Sbjct: 231 DIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFF 290
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+++ + + H + +INGL E ++AL + + G A T+ +++ + +
Sbjct: 291 NEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWS 350
Query: 129 GENDKAEKLLLEMIDKGL 146
+ A K + EM KG+
Sbjct: 351 QRMEDAYKTVDEMRLKGV 368
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 62/141 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G +++ Y +++A CK+ + + +P + L++GL +
Sbjct: 258 MKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKK 317
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L DA E F G+ + TY ++ C ++A + +M ++G PNA T++
Sbjct: 318 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 377
Query: 121 IIRSLFENGENDKAEKLLLEM 141
I+ L + +A ++ M
Sbjct: 378 ILHHLIRMQRSKEAYEVYQTM 398
Score = 46.6 bits (109), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
+ SL++ L ++ G + TYN L+ C + R++DA + ++
Sbjct: 305 FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR 364
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN- 131
+KG TY ++++ L + EA + M C P T+E ++R +F N E
Sbjct: 365 LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVR-MFCNKERL 420
Query: 132 DKAEKLLLEMIDKGLL 147
D A K+ EM KG+L
Sbjct: 421 DMAIKIWDEMKGKGVL 436
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 16 LLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKG 75
+ DAL K D+ PD+ + +++ AG+ K+ ++F +L G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 76 YHITVHTYTVMINGLCKEG-LFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKA 134
+TY+V+I GL +G +A L +M G +PNA T+ ++ + G+ + A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 135 EKLLLEMIDKGLL 147
+LL EM KG +
Sbjct: 323 RELLQEMKGKGFV 335
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL-K 62
K + +++ + ++++A + GV P+ TY++L+ GL G+ K
Sbjct: 226 KNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHK 285
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
DA++ +++ G TYT + +EG + A LL +M+ +G P+ E +
Sbjct: 286 DAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD----EKAV 341
Query: 123 RSLFE 127
R E
Sbjct: 342 REALE 346
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 67.4 bits (163), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +N I YN+L+DA KS+H++ D+G++P TYNILMD + +
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCK-EGLFDEALALLSKMEIEGCTPNAITFE 119
+ + ++ G V +YT +I+ + + + D A +M+ G P++ ++
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYT 489
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGL 146
++I + +G ++KA EM +G+
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGI 516
Score = 66.2 bits (160), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR-LKDAQEIFHDL 71
YN+ + L S D V PD T IL+ L KAGR K+ EIF +
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
KG + + ++ C EGL +EAL + ++ME +G N I + +++ + ++
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 132 DKAEKLLLEMIDKGL 146
++ E L EM DKGL
Sbjct: 396 EEVEGLFTEMRDKGL 410
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
+Y +L+ A S + +G++P + TY ++D ++G EI+ +
Sbjct: 487 SYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM 546
Query: 72 L---IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
L IKG IT Y +++G K+GL+ EA ++S+ G P+ +T+ ++ +
Sbjct: 547 LREKIKGTRIT---YNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARG 603
Query: 129 GENDKAEKLLLEM 141
G++ K +LL EM
Sbjct: 604 GQDAKLPQLLKEM 616
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++ TY S+LDA +S + ++ TYN L+DG K G
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A+++ + G +V TY +++N + G + LL +M P++IT+ +
Sbjct: 571 YIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYST 630
Query: 121 II 122
+I
Sbjct: 631 MI 632
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 66/145 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N++T+N+L+ C++ + V P+ TYN L++G + G
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A + D++ G + TY +I GLCK+ +A + +++ E PN+ TF +
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I D+ +L MI G
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSG 443
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
N+ + +L VD + P+ T N++M G C++G+L E+ D+
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDK 133
G+ T +Y +I G C++GL AL L + M G PN +TF ++I + +
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 134 AEKLLLEM 141
A K+ EM
Sbjct: 327 ASKVFGEM 334
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 70/147 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G A ++YN+L+ C+ + G+QP++ T+N L+ G C+A +
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L++A ++F ++ TY +ING ++G + A M G + +T+ +
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L + + KA + + E+ + L+
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLV 410
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 63/138 (45%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N T N ++ C+S +D G + +YN L+ G C+ G L A ++
Sbjct: 237 NPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ + G V T+ +I+G C+ EA + +M+ PN +T+ ++I +
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 129 GENDKAEKLLLEMIDKGL 146
G+++ A + +M+ G+
Sbjct: 357 GDHEMAFRFYEDMVCNGI 374
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +I+TYN+L+ LCK + + P+ T++ L+ G C
Sbjct: 369 MVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
E++ ++ G H T+ ++++ C+ FD A +L +M ++ T
Sbjct: 429 ADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQ 488
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEK 149
+ L G++ +KLL EM K L++
Sbjct: 489 VCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 66/145 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N++T+N+L+ C++ + V P+ TYN L++G + G
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A + D++ G + TY +I GLCK+ +A + +++ E PN+ TF +
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
+I D+ +L MI G
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSG 443
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 14 NSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLI 73
N+ + +L VD + P+ T N++M G C++G+L E+ D+
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 74 KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDK 133
G+ T +Y +I G C++GL AL L + M G PN +TF ++I + +
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 134 AEKLLLEM 141
A K+ EM
Sbjct: 327 ASKVFGEM 334
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 70/147 (47%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G A ++YN+L+ C+ + G+QP++ T+N L+ G C+A +
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L++A ++F ++ TY +ING ++G + A M G + +T+ +
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L + + KA + + E+ + L+
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLV 410
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 63/138 (45%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N T N ++ C+S +D G + +YN L+ G C+ G L A ++
Sbjct: 237 NPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ + G V T+ +I+G C+ EA + +M+ PN +T+ ++I +
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 129 GENDKAEKLLLEMIDKGL 146
G+++ A + +M+ G+
Sbjct: 357 GDHEMAFRFYEDMVCNGI 374
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G +I+TYN+L+ LCK + + P+ T++ L+ G C
Sbjct: 369 MVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
E++ ++ G H T+ ++++ C+ FD A +L +M ++ T
Sbjct: 429 ADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQ 488
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEK 149
+ L G++ +KLL EM K L++
Sbjct: 489 VCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+ VK QP I +N LLDALCK V + V+PD T+N+L G C+
Sbjct: 226 IRVKTQP-EINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRD 283
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG---CTPNAIT 117
K A ++ +++ G+ TY I+ C+ G+ DEA L M +G P A T
Sbjct: 284 PKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKT 343
Query: 118 FESIIRSLFENGENDKAEKLLLEMIDKGLL 147
F +I +L +N + ++ +L+ MI G L
Sbjct: 344 FALMIVALAKNDKAEECFELIGRMISTGCL 373
Score = 63.2 bits (152), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T+N L C+ + G +P+ TY +D C+AG + +A ++F +
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 329
Query: 72 LIKGYHI---TVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ KG + T T+ +MI L K +E L+ +M GC P+ T++ +I +
Sbjct: 330 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389
Query: 129 GENDKAEKLLLEMIDKG 145
+ D+A K L EM +KG
Sbjct: 390 EKVDEAYKFLDEMSNKG 406
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T+ ++ AL K+ + G PD+ TY +++G+C A ++ +A + ++
Sbjct: 343 TFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 402
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
KGY + TY + LC+ DEAL L +M C P+ T+ +I FE +
Sbjct: 403 SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDP 462
Query: 132 DKAEKLLLEM 141
D A EM
Sbjct: 463 DGAFNTWTEM 472
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQ---PDLCTYNILMDGLCKAGRLK 62
+P N TY + +D C++ VD +G P T+ +++ L K + +
Sbjct: 300 KPENF-TYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAE 358
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+ E+ ++ G V TY +I G+C DEA L +M +G P+ +T+ +
Sbjct: 359 ECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFL 418
Query: 123 RSLFENGENDKAEKLLLEMID 143
R L EN + D+A KL M++
Sbjct: 419 RVLCENRKTDEALKLYGRMVE 439
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 69/138 (50%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ TY +++ +C + VD ++G PD+ TYN + LC+ + +A +++
Sbjct: 375 DVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY 434
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +V TY ++I+ + D A ++M+ C + T+ ++I LF+
Sbjct: 435 GRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDC 494
Query: 129 GENDKAEKLLLEMIDKGL 146
+A LL E+++KGL
Sbjct: 495 HRAKEACFLLEEVVNKGL 512
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 67/130 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + +TYN L++ C + + ++G++PD+ +YN+++ + +
Sbjct: 284 MSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKK 343
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++A +F D+ +G +Y ++ +GLC+ F+EA +L +M +G P E
Sbjct: 344 WEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEG 403
Query: 121 IIRSLFENGE 130
++ L E+G+
Sbjct: 404 FLQKLCESGK 413
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 37/178 (20%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G+P + TYN L+ +S D + V+P T+ L+ GLCK R+K+A
Sbjct: 148 GKP-DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEA 206
Query: 65 QEIFHDLL-IKGYHITVHTYTVMINGLC-------------------------------- 91
++ HD+L + G TVH Y +I LC
Sbjct: 207 LKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 92 ---KEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
K G +E +L +M +GC P+ +T+ +I +++ A ++L EM++KGL
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 68/133 (51%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
Y++L+ +L K+ + ++G +PD TYN+L++G C + A + +++
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV 320
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
KG V +Y +++ + ++EA L M GC+P+ +++ + L E + +
Sbjct: 321 EKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFE 380
Query: 133 KAEKLLLEMIDKG 145
+A +L EM+ KG
Sbjct: 381 EAAVILDEMLFKG 393
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
D+ +PD CTYNIL+ G ++G DA ++F +++ K T T+ +I+GLCK+
Sbjct: 145 DEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVK 204
Query: 98 EALALLSKM-EIEGCTPNAITFESIIRSLFENGENDKAEKL 137
EAL + M ++ G P + S+I++L + GE A KL
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKL 245
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+ V G + Y SL+ ALC+ + + ++ D Y+ L+ L KAGR
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ I ++ KG TY V+ING C E + A +L +M +G P+ I++
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
I+ F + ++A L +M +G
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRG 358
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++I+YN +L + + +G PD +Y I+ DGLC+ +
Sbjct: 319 MVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM 106
++A I ++L KGY + LC+ G L +LSK+
Sbjct: 379 FEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESG----KLEILSKV 420
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 61/106 (57%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
V+PDL Y I++ G+ A ++F +LL+ G V+TY V INGLCK+ + AL
Sbjct: 282 VEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGAL 341
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
++S M G PN +T+ +I++L + G+ +A+ L EM G+
Sbjct: 342 KMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGV 387
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ TYN ++ LCK + ++ G +P++ TYNIL+ L KAG L A+ ++
Sbjct: 320 DVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLW 379
Query: 69 HDLLIKGYHITVHTYTVMING-------LCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
++ G + HT+ +MI+ +C GL +EA + + E +
Sbjct: 380 KEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM-------NVFVKSSRIEEV 432
Query: 122 IRSLFENGENDKAEKLLLEMI 142
I L E G D+A +LL ++
Sbjct: 433 ISRLCEKGLMDQAVELLAHLV 453
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 52/107 (48%)
Query: 43 PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL 102
PD+ TYN+ ++GLCK ++ A ++ + G V TY ++I L K G A L
Sbjct: 319 PDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTL 378
Query: 103 LSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLEK 149
+ME G N+ TF+ +I + E E A LL E + + K
Sbjct: 379 WKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVK 425
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 66.2 bits (160), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 69/147 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG + +TY SL+ + S VD D G +P + +Y M L GR
Sbjct: 148 MKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGR 207
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+++A E++ ++L HTYTV++ L G +EAL + KM+ G P+
Sbjct: 208 VEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNI 267
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I + GE ++L+ M + G++
Sbjct: 268 LIAKALKFGETSFMTRVLVYMKENGVV 294
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 57/104 (54%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
+G + D TY ++D +AGR++ +FH + KG I TYT +I+ + G D
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 99 ALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMI 142
A+ L +M GC P +++ + ++ LF +G ++A ++ EM+
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEML 219
Score = 49.7 bits (117), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 66/145 (45%)
Query: 2 HVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRL 61
+KG + TY ++LD ++ + ++GV D TY L+ + +G +
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 62 KDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
A ++ ++ G TV +YT + L +G +EA + +M +PN T+ +
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 122 IRSLFENGENDKAEKLLLEMIDKGL 146
+ L G+ ++A + +M + G+
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGV 258
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 66.2 bits (160), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G ++ITY S+++ C + +D + TY+ +++G+CK+G
Sbjct: 191 MDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGD 250
Query: 61 LKDAQEIFHDL-------LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTP 113
++ A E+ ++ LI +T YT++I C++ +EAL +L +M GC P
Sbjct: 251 MERALELLAEMEKEDGGGLISPNAVT---YTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 114 NAITFESIIRSLFENGENDKAEKLLLEMIDK 144
N +T +I+ + EN E+ KA L ++IDK
Sbjct: 308 NRVTACVLIQGVLENDEDVKA---LSKLIDK 335
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G+ PD+ TY +++G C AG++ DA + ++ + TY+ ++ G+CK G + A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 100 LALLSKMEIEG----CTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
L LL++ME E +PNA+T+ +I++ E ++A +L M ++G +
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
V D YN+++ G L A + ++ G + V TYT MING C G D+A
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
L +M C N++T+ I+ + ++G+ ++A +LL EM
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEM 261
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 65.9 bits (159), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +++ +NS+L +++ D + G+ PDL TYN LMD + G A
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+EI L + +Y +I G C+ GL EA+ +LS+M G P T+ + +
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 61/130 (46%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +++TYNSL+D + ++PDL +YN ++ G C+ G +++A
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEA 720
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ +G + TY ++G G+F E ++ M C PN +TF+ ++
Sbjct: 721 VRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDG 780
Query: 125 LFENGENDKA 134
G+ +A
Sbjct: 781 YCRAGKYSEA 790
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 62/141 (43%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +TYN+LL K+ + D TYN L+ +AG K+A
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + KG TYT +I+ K G DEAL L M+ GC PN T+ +++
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 125 LFENGENDKAEKLLLEMIDKG 145
L + +++ K+L +M G
Sbjct: 431 LGKKSRSNEMIKMLCDMKSNG 451
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 65/135 (48%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
PA+ +TYN L+ A ++ +GV P+ TY ++D KAG+ +A +
Sbjct: 348 PADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALK 407
Query: 67 IFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLF 126
+F+ + G TY +++ L K+ +E + +L M+ GC+PN T+ +++
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCG 467
Query: 127 ENGENDKAEKLLLEM 141
G + ++ EM
Sbjct: 468 NKGMDKFVNRVFREM 482
Score = 59.3 bits (142), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCK-SHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAG 59
M G ++TYN +LD K +G++ D T + ++ + G
Sbjct: 236 MKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREG 295
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
L++A+E F +L GY TY ++ K G++ EAL++L +ME C +++T+
Sbjct: 296 LLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGLL 147
++ + G + +A ++ M KG++
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVM 383
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQ-GVQPDLCTYNILMDGLCKAG 59
M G N T+N++L ALC + +D G +PD T+N L+ + G
Sbjct: 447 MKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
DA +++ ++ G++ V TY ++N L ++G + ++S M+ +G P ++
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY- 564
Query: 120 SIIRSLFENGEN 131
S++ + G N
Sbjct: 565 SLMLQCYAKGGN 576
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N ITY +++DA K+ D + G P+ CTYN ++ L K R
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL-ALLSKMEIEGCTPNAITFE 119
+ ++ D+ G T+ M+ LC D+ + + +M+ G P+ TF
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFN 495
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGL 146
++I + G A K+ EM G
Sbjct: 496 TLISAYGRCGSEVDASKMYGEMTRAGF 522
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 59/109 (54%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
+QG PD+ YN LM G+ KAG + +A + + G ++++ +++NG + G+
Sbjct: 507 NQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPR 566
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
A+ + ++ G P+ +T+ +++ G ++A +++ EM DKG
Sbjct: 567 RAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY+ L+D CK++ V+ ++G P Y L++ L KA R + A E+F +L
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+++ Y VMI K G EA+ L ++M+ +G P+ + +++ + + G
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 132 DKAEKLLLEMIDKG 145
++A LL +M + G
Sbjct: 531 NEANSLLRKMEENG 544
Score = 59.3 bits (142), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP I Y +LL K V+ G P + TY L+ GL KAGR+ +A
Sbjct: 265 QPTEKI-YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAY 323
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+ D+L G V ++N L K G +E + S+M + CTP +++ ++I++L
Sbjct: 324 GFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL 383
Query: 126 FEN 128
FE+
Sbjct: 384 FES 386
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 63/133 (47%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+ ITY++L+ + K D D +QP Y L+ K G+++ A ++F
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ G TV+TYT +I GL K G DEA M +G TP+ + +++ L +
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 129 GENDKAEKLLLEM 141
G ++ + EM
Sbjct: 352 GRVEELTNVFSEM 364
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 64/125 (51%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++ YN+L+ + K+ ++ + G + D+ ++NI+++G + G
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A E+F + G TY ++ G+F+EA ++ +M+ +G +AIT+ S
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSS 624
Query: 121 IIRSL 125
I+ ++
Sbjct: 625 ILDAV 629
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQG-VQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
TYNS++ L + + ++G PD TY+ L+ K GR A +F +
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ T YT ++ K G ++AL L +M+ GC+P T+ +I+ L + G
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 131 NDKAEKLLLEMIDKGL 146
D+A +M+ GL
Sbjct: 319 VDEAYGFYKDMLRDGL 334
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + TY L+ L K+ VD G+ PD+ N LM+ L K GR
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCK-EGLFDEALALLSKMEIEGCTPNAITFE 119
+++ +F ++ + TV +Y +I L + + E + KM+ + +P+ T+
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGL 146
+I + +KA LL EM +KG
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGF 440
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%)
Query: 15 SLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIK 74
++LD LCK V D+G P++ Y +++ CKA +++DA+ IF +
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 75 GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
G +Y V++ GL + D+A+A S+M G +PN TF ++ +L
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDAL 246
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 54/110 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++ Y ++++A CK+H ++ + G+ P+ +Y +L+ GL
Sbjct: 157 MRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNM 216
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG 110
L DA ++L G+ V T+ +++ LC+ ++A + + + +G
Sbjct: 217 LDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%)
Query: 15 SLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIK 74
++LD LCK V D+G P++ Y +++ CKA +++DA+ IF +
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 75 GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
G +Y V++ GL + D+A+A S+M G +PN TF ++ +L
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDAL 246
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 54/110 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG ++ Y ++++A CK+H ++ + G+ P+ +Y +L+ GL
Sbjct: 157 MRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNM 216
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG 110
L DA ++L G+ V T+ +++ LC+ ++A + + + +G
Sbjct: 217 LDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 69/142 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +++TYN+++ ALC+ +D G +PDL ++N L++ + +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
I+ + K + +Y + GL + F +AL L+ M+ EG +P+ T+ ++I +
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
+ ++ K EM +KGL
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGL 329
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 61/138 (44%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M K NI +YNS + L ++ +G+ PD+ TYN L+
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L++ + ++++ KG TY ++I LCK+G D A+ + + ++
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKP 373
Query: 121 IIRSLFENGENDKAEKLL 138
++ L G+ D+A +L+
Sbjct: 374 VVERLMGAGKIDEATQLV 391
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G +I TY +LL A CKS + + + + YNIL+DG + G + +
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWE 747
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A ++ + +G +HTYT I+ K G + A + +ME G PN T+ ++I+
Sbjct: 748 AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 807
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+KA EM G+
Sbjct: 808 GWARASLPEKALSCYEEMKAMGI 830
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 72/143 (50%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G ++I YN+++ A C ++D +P T+ ++ G K+G ++
Sbjct: 548 EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRR 607
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+ E+F + G TVHT+ +INGL ++ ++A+ +L +M + G + N T+ I++
Sbjct: 608 SLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
G+ KA + + ++GL
Sbjct: 668 GYASVGDTGKAFEYFTRLQNEGL 690
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 6/153 (3%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + P N YN L+D + V +GV+PD+ TY + KAG
Sbjct: 720 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 779
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A + ++ G + TYT +I G + L ++AL+ +M+ G P+ +
Sbjct: 780 MNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHC 839
Query: 121 IIRSLFENGENDKA------EKLLLEMIDKGLL 147
++ SL +A + EM++ GL+
Sbjct: 840 LLTSLLSRASIAEAYIYSGVMTICKEMVEAGLI 872
Score = 59.3 bits (142), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 64/146 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N+ TY+ +++ K +G++PD+ YN ++ C G
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A + ++ + T T+ +I+G K G +L + M GC P TF
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I L E + +KA ++L EM G+
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGV 655
Score = 59.3 bits (142), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 65/141 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M + G AN TY ++ ++G+ D+ TY L+ CK+GR
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A + ++ + Y ++I+G + G EA L+ +M+ EG P+ T+ S
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 769
Query: 121 IIRSLFENGENDKAEKLLLEM 141
I + + G+ ++A + + EM
Sbjct: 770 FISACSKAGDMNRATQTIEEM 790
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 63/141 (44%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G A I Y++++D + G P + TY L++ K G+
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGK 499
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A E+ + +G + TY++MING K + A A+ M EG P+ I + +
Sbjct: 500 ISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNN 559
Query: 121 IIRSLFENGENDKAEKLLLEM 141
II + G D+A + + EM
Sbjct: 560 IISAFCGMGNMDRAIQTVKEM 580
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 56/135 (41%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T+N L++ L + ++ GV + TY +M G G A E F L
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+G + + TY ++ CK G ALA+ +M N+ + +I G+
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 132 DKAEKLLLEMIDKGL 146
+A L+ +M +G+
Sbjct: 746 WEAADLIQQMKKEGV 760
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 54/102 (52%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G P + T+N L++GL + +++ A EI ++ + G HTYT ++ G G +A
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
++++ EG + T+E+++++ ++G A + EM
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Score = 45.8 bits (107), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 60/138 (43%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N Y ++ A C++ +++ ++G+ + Y+ +MDG K +F
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
L G+ TV TY +IN K G +AL + M+ EG N T+ +I +
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 129 GENDKAEKLLLEMIDKGL 146
+ A + +M+ +G+
Sbjct: 533 KDWANAFAVFEDMVKEGM 550
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 59/106 (55%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
+ P+ +Y+ ++ K G L D+ ++ ++ +G + Y ++ L +E FDEA+
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAM 349
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
L+ K+ EG P+++T+ S+IR L E G+ D A +L MI + L
Sbjct: 350 KLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
Score = 63.2 bits (152), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G I YNSL+ L + D ++G++PD TYN ++ LC+AG+
Sbjct: 320 MKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGK 379
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A+ + ++ + TV T+ + + F++ L +L +M+I P TF
Sbjct: 380 LDVARNVLATMISENLSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDLGPTEETFLL 435
Query: 121 IIRSLFENGENDKAEKLLLEM 141
I+ LF+ + + A K+ EM
Sbjct: 436 ILGKLFKGKQPENALKIWAEM 456
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG N ++ ++ D D+GV + TYNI + LCK +
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
K+A+ + +L G TY+ +I+G C E F+EA L M GC P++ + +
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLL 147
+I L + G+ + A L E ++K +
Sbjct: 333 LIYYLCKGGDFETALSLCKESMEKNWV 359
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ TYN ++ C+S +G++P+ ++ +++ G + +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++ + +G +I V TY + I LCK EA ALL M G PN +T+ +I
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 125 LFENGENDKAEKLLLEMIDKG 145
+ ++A+KL M+++G
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRG 322
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 71/144 (49%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + TYN + +LCK G++P+ TY+ L+ G C
Sbjct: 248 MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDD 307
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++A+++F ++ +G Y +I LCK G F+ AL+L + + P+ +S
Sbjct: 308 FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKS 367
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
++ L ++ + ++A++L+ ++ +K
Sbjct: 368 LVNGLAKDSKVEEAKELIGQVKEK 391
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
+ G N +YN L+ A C + + ++ V PD+ +Y IL+ G C+ G++
Sbjct: 183 LHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVN 242
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
A E+ D+L KG+ V T +I GLC +G+FDE L +M +G +P+ ++
Sbjct: 243 GAMELLDDMLNKGF---VPDRT-LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 298
Query: 123 RSLFENGENDKA 134
+ G+ ++A
Sbjct: 299 KGFCSFGKVEEA 310
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
GV P+ +YN+LM C L A ++F +L + V +Y ++I G C++G +
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 99 ALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
A+ LL M +G P+ ++I L + G D+ +K L EMI KG
Sbjct: 244 AMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGF 287
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN +L S ++ +G+ PD T+N +++G C+ ++ +A+++F ++
Sbjct: 257 TYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM 316
Query: 72 LIKGYHI--TVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
KG I +V +YT MI G D+ L + +M G PNA T+ +++ L + G
Sbjct: 317 --KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAG 374
Query: 130 ENDKAEKLLLEMIDKGLLEK 149
+ +A+ +L M+ K + K
Sbjct: 375 KMVEAKNILKNMMAKHIAPK 394
Score = 59.7 bits (143), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 66/141 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG P + + L+++ K+ V D GV+ + +YN L + + GR
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A+ F+ ++ +G T HTY +M+ G + AL M+ G +P+ TF +
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+I + D+AEKL +EM
Sbjct: 296 MINGFCRFKKMDEAEKLFVEM 316
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G I +YNSL + + +GV+P TYN+++ G + RL+ A
Sbjct: 215 GVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETA 274
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
F D+ +G T+ MING C+ DEA L +M+ P+ +++ ++I+
Sbjct: 275 LRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKG 334
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
D ++ EM G+
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSGI 356
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN +++ LC + +GVQ D N L+ G K G + EI +
Sbjct: 477 YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMS 535
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
+G + Y ++I +G +A L M +G P++ F S+I SLFE+G
Sbjct: 536 RRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQ 595
Query: 133 KAEKLLLEMIDKGL 146
A ++++ MIDK +
Sbjct: 596 TASRVMMIMIDKNV 609
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + T+N++++ C+ +D + P + +Y ++ G R
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTP--NAITF 118
+ D IF ++ G TY+ ++ GLC G EA +L M + P N+I F
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSI-F 399
Query: 119 ESIIRSLFENGENDKAEKLLLEM 141
++ S + G+ A ++L M
Sbjct: 400 LKLLVSQSKAGDMAAATEVLKAM 422
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 70/139 (50%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
+ G+ + ITY L+D+L K++ D G++P L TY+ L+ G KAG+ +
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+A++ F +L G Y+VM++ L + +A L M +G TP+ +E +I
Sbjct: 491 EAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Query: 123 RSLFENGENDKAEKLLLEM 141
L + +D +K + +M
Sbjct: 551 LGLMKENRSDDIQKTIRDM 569
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXD-QGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
+TYN+++ K +D G PD TY +L+D L KA R +A +
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
++L G T+ TY+ +I G K G +EA S M G P+ + + ++ L
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGN 522
Query: 130 ENDKAEKLLLEMIDKG 145
E KA L +MI G
Sbjct: 523 ETRKAWGLYRDMISDG 538
Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHV--DXXXXXXXXXXDQGVQPDLCTYNILMDGLCKA 58
M +G ++I++N+L++A KS + + + G++PD TYN L+ +
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRD 310
Query: 59 GRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF 118
L A ++F D+ + TY MI+ + GL EA L ++E++G P+A+T+
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDKGL 146
S++ + +K +++ +M G
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGF 398
Score = 59.7 bits (143), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+ +KG + +TYNSLL A + + + G D TYN ++ K G+
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 61 LKDAQEIFHDLL-IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFE 119
L A +++ D+ + G + TYTV+I+ L K EA AL+S+M G P T+
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKG 145
++I + G+ ++AE M+ G
Sbjct: 478 ALICGYAKAGKREEAEDTFSCMLRSG 503
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 36/178 (20%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + ITYN+LL A + ++D QPDL TYN ++ + G +A
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 65 QEIFHDLLIKGYH---ITVH--------------------------------TYTVMING 89
+ +F +L +KG+ +T + TY +I+
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 90 LCKEGLFDEALALLSKME-IEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
K+G D AL L M+ + G P+AIT+ +I SL + +A L+ EM+D G+
Sbjct: 412 YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGI 469
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 58/132 (43%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN+L+ C+ + + G+ P L TY L+ K L+ A+++F +L
Sbjct: 964 TYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
L KG + Y M+ G +A LL M+ G P T ++ S +G
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 132 DKAEKLLLEMID 143
+AEK+L + D
Sbjct: 1084 QEAEKVLSNLKD 1095
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 2/137 (1%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD--AQEIFHD 70
YN+++ +S +G PDL ++N L++ K+G L A E+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ G TY +++ ++ D A+ + ME C P+ T+ ++I G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 131 NDKAEKLLLEMIDKGLL 147
+AE+L +E+ KG
Sbjct: 348 AAEAERLFMELELKGFF 364
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 60/137 (43%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G+ ++ T+NSL+ A + + G P + + NIL+ LC GRL++
Sbjct: 782 GRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEEL 841
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ +L G+ I+ + +M++ + G E + S M+ G P + +I
Sbjct: 842 YVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIEL 901
Query: 125 LFENGENDKAEKLLLEM 141
L + AE ++ EM
Sbjct: 902 LCKGKRVRDAEIMVSEM 918
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+T +L+ A ++ ++ + D+ + +MD K G + DA+++F
Sbjct: 376 VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ K + + ++ + GL EAL L M++EG PN IT+ II SL NG+
Sbjct: 436 TVEKDLIL----WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ 491
Query: 131 NDKAEKLLLEMIDKGLLEKL 150
D+A+ + L+M G++ L
Sbjct: 492 VDEAKDMFLQMQSSGIIPNL 511
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 60/109 (55%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++I +N+LL A +S +GV P++ T+N+++ L + G++ +A+++F
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAIT 117
+ G + ++T M+NG+ + G +EA+ L KM+ G PNA +
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 60/109 (55%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
D V+ DL +N L+ ++G +A +F+ + ++G V T+ ++I L + G D
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVD 493
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
EA + +M+ G PN I++ +++ + +NG +++A L +M + GL
Sbjct: 494 EAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGL 542
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 70/139 (50%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
VKG ANI+T+ S++ K + + V DL +Y +L+DG G+++
Sbjct: 239 VKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVE 298
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+A+ + + K + + Y +++NG + GL ++ + L S+M G TPN T+ ++
Sbjct: 299 EAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLM 358
Query: 123 RSLFENGENDKAEKLLLEM 141
L + G+ +A L E+
Sbjct: 359 NGLCKAGKVCEAMSFLNEL 377
Score = 62.8 bits (151), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
MH K YN +++ + V+ +GV P+ TY +LM+GLCKAG+
Sbjct: 307 MHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGK 366
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A ++L + + I Y+ + + G+ D++L ++++M +G P A E
Sbjct: 367 VCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICER 426
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
+ SLFE N K ++L+ ++ K
Sbjct: 427 LADSLFE--VNRKEAQMLITIVVK 448
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 67/136 (49%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
+Y L+D V+ D+ ++ + YN++M+G + G ++ E++ ++
Sbjct: 283 SYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEM 342
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+G TY V++NGLCK G EA++ L+++ + + + ++ + G
Sbjct: 343 SSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMI 402
Query: 132 DKAEKLLLEMIDKGLL 147
DK+ +++ EMI G +
Sbjct: 403 DKSLEVVAEMIRDGFI 418
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G P N T+N L++ LCK + + G QPD TY +L+ L +A R
Sbjct: 313 MEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAAR 372
Query: 61 LKDAQEIFHDLLIKGYH--ITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF 118
+ + E+ + GY + Y + LC + A+++ M+ GC P T+
Sbjct: 373 IGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTY 432
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDKGL 146
+ ++ + N + +A L E KG+
Sbjct: 433 DLLMGKMCANNQLTRANGLYKEAAKKGI 460
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 16 LLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD-------AQEIF 68
L+ C + +D G + YN+++D +CK R KD +++
Sbjct: 251 LISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVL 310
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G T+ V+IN LCK +EA+ L +M GC P+A T+ +IRSL++
Sbjct: 311 LEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQA 370
Query: 129 ---GENDKAEKLLLEMIDK 144
GE D EMIDK
Sbjct: 371 ARIGEGD-------EMIDK 382
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +++TYNSL+D CK ++ ++ PD+ TY ++ GL G+
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A+E+ ++ G + V Y I C +A L+ +M +G +PNA T+
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 121 IIRSLFENGENDKAEKLLLEMI 142
R L + ++ +L + M+
Sbjct: 357 FFRVLSLANDLGRSWELYVRML 378
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 59/108 (54%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
+G++PD+ TYN L+D CK ++ A ++ + + V TYT +I GL G D+
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 99 ALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
A +L +M+ GC P+ + + IR+ A+KL+ EM+ KGL
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGL 347
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
+N+LL LC+ + Q QPDL T+NIL+ G + + E
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEEAEAFFEEMKG-- 239
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
KG V TY +I+ CK+ ++A L+ KM E TP+ IT+ ++I L G+ D
Sbjct: 240 -KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 133 KAEKLLLEMIDKG 145
KA ++L EM + G
Sbjct: 299 KAREVLKEMKEYG 311
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 62.8 bits (151), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
++ YN+++ L K H D V D TY I++DGLC ++ A++ +
Sbjct: 519 VVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWD 578
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
D++ Y + GLC+ G +A L + G PN + + ++I +G
Sbjct: 579 DVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSG 638
Query: 130 ENDKAEKLLLEMIDKG 145
+A ++L EM G
Sbjct: 639 LKREAYQILEEMRKNG 654
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 43 PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL 102
P L YN LM+ LC R+ DA ++ D+ +G+ V T+T +I G C+ + A +
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 103 LSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
+M + G PN++T +I + + + KL+ E+
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKEL 258
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN L LC + +PD T N +++GLCK GR+ DA ++ D++
Sbjct: 415 YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMM 474
Query: 73 IKGYHI--TVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAITFESIIRSLFENG 129
+ V TVM GL +G +EAL +L+++ E P + + ++IR LF+
Sbjct: 475 TGKFCAPDAVTLNTVMC-GLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLH 533
Query: 130 ENDKA 134
+ D+A
Sbjct: 534 KGDEA 538
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 50/111 (45%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
A+ TY ++D LC ++ VD + D Y + GLC++G L DA
Sbjct: 552 ADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHF 611
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF 118
+DL G V Y +I + GL EA +L +M G P+A+T+
Sbjct: 612 LYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW 662
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQ----PDLCTYNILMDGLC 56
M KG +YN+++ LCK D ++G + P TY +LM+ LC
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCK----DGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLC 388
Query: 57 KAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAI 116
K A+ + +L K Y + + GLC E L +L M C P+
Sbjct: 389 KELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEY 448
Query: 117 TFESIIRSLFENGENDKAEKLLLEMI 142
T ++I L + G D A K+L +M+
Sbjct: 449 TLNTVINGLCKMGRVDDAMKVLDDMM 474
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY L+++LCK + YNI + GLC + + +
Sbjct: 379 TYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSM 438
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEI-EGCTPNAITFESIIRSLFENGE 130
L +T +INGLCK G D+A+ +L M + C P+A+T +++ L G
Sbjct: 439 LQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGR 498
Query: 131 NDKAEKLL 138
++A +L
Sbjct: 499 AEEALDVL 506
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G N+ T+N+++ LC+ + +G QPD TY +C R
Sbjct: 285 MRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSR 338
Query: 61 LKDAQEI---FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAIT 117
L+ EI F ++ G + TY +++ + G L + M+ G TP++
Sbjct: 339 LEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAA 398
Query: 118 FESIIRSLFENGENDKAEKLLLEMIDKGL 146
+ ++I +L + G D A + EMI++GL
Sbjct: 399 YNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
+GV DL +Y+I MD +CK+G+ A +++ ++ + + V Y +I + +
Sbjct: 218 EGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEF 277
Query: 99 ALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
+ + +M GC PN T +II+ L E+G A ++L EM +G
Sbjct: 278 GIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRG 324
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G ++ +Y+ +D +CKS + ++ D+ YN ++ + +
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG 274
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ +F ++ +G V T+ +I LC++G +A +L +M GC P++IT+
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC 334
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
+ L + E L MI G+ K+
Sbjct: 335 LFSRLEKPSE---ILSLFGRMIRSGVRPKM 361
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQ--GVQPDLCTYNILMDGLCKAGRLK 62
G P ++++N+LL A S + + + PD +Y +L+ C +G+ +
Sbjct: 132 GTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPE 191
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCT-PNAITFESI 121
A EI D+ +KG +T+ +T ++ L K GL DEA +L +M +GC N + +
Sbjct: 192 KAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRL 251
Query: 122 IRSLFENGENDKAEKLLLEMIDKGL 146
+ + E+ E + ++L+ EM GL
Sbjct: 252 MNAAKESPE--RVKELMEEMSSVGL 274
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G++PD +YN LM C G + +A++++ L T+ +I LC GL+D+
Sbjct: 273 GLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGL----EQPNAATFRTLIFHLCINGLYDQG 328
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAE 135
L + K I P+ T + + L +N + A
Sbjct: 329 LTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDAR 364
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 63/135 (46%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY L ALC+ + D ++ ++D L + G+ A +F
Sbjct: 421 TYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRC 480
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+++ Y + V +YTV I GL + +EA +L M+ G PN T+ +II L + E
Sbjct: 481 ILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKET 540
Query: 132 DKAEKLLLEMIDKGL 146
+K K+L E I +G+
Sbjct: 541 EKVRKILRECIQEGV 555
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 62/108 (57%)
Query: 39 QGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDE 98
+G P+ + ++ C+ G + +A ++ ++ G ++V+ ++++++G + G +
Sbjct: 206 EGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQK 265
Query: 99 ALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
A+ L +KM GC+PN +T+ S+I+ + G D+A +L ++ +GL
Sbjct: 266 AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGL 313
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 64/135 (47%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
+ +L C++ V G+ + +++L+ G ++G + A ++F+ ++
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI 274
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
G + TYT +I G G+ DEA +LSK++ EG P+ + +I + G +
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFE 334
Query: 133 KAEKLLLEMIDKGLL 147
+A K+ + + L+
Sbjct: 335 EARKVFTSLEKRKLV 349
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 48 YNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME 107
Y+ + L GR +A+EI + GY TY+ ++ GLCK +EA +L +ME
Sbjct: 373 YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQME 432
Query: 108 IEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+GC P+ T+ +I+ +N E DKA M++KG
Sbjct: 433 AQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGF 471
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 67/138 (48%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G+ + Y+ + +L D + G +PD TY+ L+ GLCKA RL++A
Sbjct: 365 GKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEA 424
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ + + +G + T+T++I G CK D+ALA + M +G ++ + +I
Sbjct: 425 RGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDG 484
Query: 125 LFENGENDKAEKLLLEMI 142
+ + + A L+EM+
Sbjct: 485 FVIHNKFEGASIFLMEMV 502
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
+P NI TY+ L+ LCK+ ++ QG PD+ T+ IL+ G CK L A
Sbjct: 402 EPDNI-TYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKAL 460
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM-EIEGCTPNAITFESIIRS 124
F ++L KG+ I + V+I+G F+ A L +M + P T++ +I
Sbjct: 461 ACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDK 520
Query: 125 LFENGENDKAEKLLLEM 141
L + ++++A LL M
Sbjct: 521 LLKIKKSEEALDLLQMM 537
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 58/117 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
NI+ +NSL+ L + + +G++PD T+N L G G+ + A ++
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+ KG V ++T + +G K G F AL + KM+ EG PNA T ++++ L
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G +N+ NSL+ ++ ++ D+ +L ++N ++ K G + DA
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSYTKLGYVDDA 174
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ I G + T+ +++G +GL +A+A+L +M+I G P+ + S++++
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 125 LFENG 129
+ E G
Sbjct: 235 VAEPG 239
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 55/103 (53%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
++ +N L+ GL A LKDA+ + + +G T+ + +G G ++AL ++
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 104 SKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
KM+ +G PN +++ +I +NG A K+ ++M ++G+
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 66/134 (49%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
+N LL+ +S + V+P + TY L++G C+ R++ A E+ ++
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK 312
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
+ I + +I+GL + G EAL ++ + + P +T+ S++++ + G+
Sbjct: 313 MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLP 372
Query: 133 KAEKLLLEMIDKGL 146
A K+L M+ +G+
Sbjct: 373 GASKILKMMMTRGV 386
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 61/137 (44%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G TYN K + + + G PD TY++++ LC+ G+
Sbjct: 381 MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A ++ ++ +G + T T++I+ LC+ + +EA G P ITF+
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKM 500
Query: 121 IIRSLFENGENDKAEKL 137
I L G +D A++L
Sbjct: 501 IDNGLRSKGMSDMAKRL 517
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 64/138 (46%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N + +N ++D L ++ + P + TYN L+ CKAG L A +I
Sbjct: 319 NFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKIL 378
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ +G T TY K +E + L K+ G +P+ +T+ I++ L E+
Sbjct: 379 KMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCED 438
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ A ++ EM ++G+
Sbjct: 439 GKLSLAMQVNKEMKNRGI 456
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 16 LLDALCKSHHVDXXXXXXXX---XXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
LLDALCK HV D P + +NIL++G ++ +LK A++++ ++
Sbjct: 218 LLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMK 277
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
TV TY +I G C+ A+ +L +M++ N + F II L E G
Sbjct: 278 AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLS 337
Query: 133 KA 134
+A
Sbjct: 338 EA 339
Score = 53.5 bits (127), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 10 IITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
I+TYNSL+ CK+ + +GV P TYN K + ++ ++
Sbjct: 355 IVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYF 414
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL---- 125
L+ G+ TY +++ LC++G A+ + +M+ G P+ +T +I L
Sbjct: 415 KLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLE 474
Query: 126 -----FENGENDKAEKLL-----LEMIDKGLLEK 149
FE +N ++ +MID GL K
Sbjct: 475 MLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSK 508
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + +TY+ +L LC+ + ++G+ PDL T +L+ LC+ L++A
Sbjct: 420 GHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA 479
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM 106
E F + + +G T+ ++ NGL +G+ D A L S M
Sbjct: 480 FEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 35/174 (20%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ +YN+L+ LC ++G++PD T+NIL+ G+ ++ ++I+
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 69 HDLL-------IKGYHIT----------------------------VHTYTVMINGLCKE 93
++ I+ Y+ V T+T MI G E
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 94 GLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
G DEA+ ++E GC P F S++ ++ + G+ + A +L E+ K LL
Sbjct: 296 GKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL 349
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 47 TYNILMDGLCKAGRLKDAQEIFHDLLIK-GYHITVHTYTVMINGLCKEGLFDEALALLSK 105
++N L++ + + + IF +L K V +Y +I GLC +G F EA+AL+ +
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 106 MEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+E +G P+ ITF ++ + G+ ++ E++ M++K +
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNV 243
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++++Y ++++AL K + D PD+ N ++D LC R+ +A E+F
Sbjct: 281 DVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVF 340
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG--CTPNAITFESIIR 123
++ KG V TY ++ LCK ++ L+ +ME++G C+PN +TF +++
Sbjct: 341 REISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK 397
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 59.7 bits (143), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
QP++ TYNIL+ ++G++ +F DL + V+T+ +++ K G+ E A
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 102 LLSKMEIEGCTPNAITFESIIRSLFENGENDKAEK 136
+L++M C P+ ITF +I S + E +K E+
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 13/141 (9%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ T+N ++DA K+ + +PD+ T+N+L+D K + ++ F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII------ 122
L+ T+ T+ MI K + D+A + KM P+ IT+E +I
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 123 ------RSLFEN-GENDKAEK 136
R +FE GE+D+ K
Sbjct: 362 GSVSRAREIFEEVGESDRVLK 382
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP N++TYN LL A +S VD V PD+ T+N +MD K G +K+ +
Sbjct: 205 QP-NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEME 263
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+ + + T+ V+I+ K+ F++ + P TF S+I +
Sbjct: 264 AVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY 323
Query: 126 FENGENDKAEKLLLEMID 143
+ DKAE + +M D
Sbjct: 324 GKARMIDKAEWVFKKMND 341
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 59.7 bits (143), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
QP++ TYNIL+ ++G++ +F DL + V+T+ +++ K G+ E A
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 102 LLSKMEIEGCTPNAITFESIIRSLFENGENDKAEK 136
+L++M C P+ ITF +I S + E +K E+
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 13/141 (9%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++ T+N ++DA K+ + +PD+ T+N+L+D K + ++ F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII------ 122
L+ T+ T+ MI K + D+A + KM P+ IT+E +I
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 123 ------RSLFEN-GENDKAEK 136
R +FE GE+D+ K
Sbjct: 362 GSVSRAREIFEEVGESDRVLK 382
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP N++TYN LL A +S VD V PD+ T+N +MD K G +K+ +
Sbjct: 205 QP-NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEME 263
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+ + + T+ V+I+ K+ F++ + P TF S+I +
Sbjct: 264 AVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY 323
Query: 126 FENGENDKAEKLLLEMID 143
+ DKAE + +M D
Sbjct: 324 GKARMIDKAEWVFKKMND 341
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 59.7 bits (143), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 37/154 (24%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXX-XXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
G PAN ITYN LL CK +D D G++PD+ +YNI++DG
Sbjct: 482 GVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAG 541
Query: 64 AQEIFHDLLIKGYHITVHTYT------------------------------------VMI 87
A F+++ +G T +YT +++
Sbjct: 542 ALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLV 601
Query: 88 NGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
G C+ GL ++A ++S+M+ G PN T+ S+
Sbjct: 602 EGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSL 635
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+TY +++ A + +D GV + TYN+L+ G CK ++ A+++ +
Sbjct: 453 VTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLRE 512
Query: 71 LL-IKGYHITVHTYTVMINGLCKEGLFDE---ALALLSKMEIEGCTPNAITFESIIRSLF 126
+ G V +Y ++I+G L D+ ALA ++M G P I++ +++++
Sbjct: 513 MTEDAGIEPDVVSYNIIIDGCI---LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 127 ENGENDKAEKLLLEMID 143
+G+ A ++ EM++
Sbjct: 570 MSGQPKLANRVFDEMMN 586
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 43 PDLCTYNILMDGLCKAGRLKDAQEIFHDLLI---KGYHITVHTYTVMINGLCKEGLFDEA 99
PD Y LM G K GR+ D + + + H TYT +++ GL D A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLLE 148
+L++M G N IT+ +++ + + D+AE LL EM + +E
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIE 520
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXX-XXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
N+++YN +++A C +VD + P TY L GL +AGR+ DA +
Sbjct: 215 NVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASL 274
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
++L KG Y +I G G FD+A+ +++ + + I + + FE
Sbjct: 275 LREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFE 334
Query: 128 NGENDKAEKLLLEMIDK 144
G + +A + ++DK
Sbjct: 335 KGNDKEAMESYRSLLDK 351
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKG-YHITVHTYTVMINGLCKEGLFDEA 99
+ P++ +YN +++ C G + +A E++ +L + + TY + GL + G +A
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
+LL +M +G ++ + ++IR + G+ DKA + E+ K
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK 316
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G N++ YN L+D++ ++ G P+ TY L+ +A
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARY 365
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME-IEGCTPNAITFE 119
DA I+ ++ KG +TV Y +++ DEA + M+ E C P++ TF
Sbjct: 366 GDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFS 425
Query: 120 SIIRSLFENGENDKAEKLLLEMIDKGL 146
S+I +G +AE LL+M + G
Sbjct: 426 SLITVYACSGRVSEAEAALLQMREAGF 452
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 65/131 (49%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+T+++L+ S + D GV+P+L YN L+D + +A R A+ I+ D
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKD 340
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
L+ G+ TY ++ + D+ALA+ +M+ +G + I + +++ +N
Sbjct: 341 LITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRY 400
Query: 131 NDKAEKLLLEM 141
D+A ++ +M
Sbjct: 401 VDEAFEIFQDM 411
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
NIITYN++L+ + K+ D G++PDL +Y ++D L ++G +K++ +
Sbjct: 246 VNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRL 305
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL 102
F ++ + +V+ Y +I+ L K G F AL L
Sbjct: 306 FDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQL 340
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXX-XXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
++ITYNS+LD L ++ V+ D V ++ TYN +++G+ KA R I
Sbjct: 211 DVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVI 270
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+++++ G + +YT +I+ L + G E+L L +M+ P+ + ++I L +
Sbjct: 271 YNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKK 330
Query: 128 NGENDKAEKL 137
+G+ A +L
Sbjct: 331 SGDFQSALQL 340
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 7 PANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQE 66
P +I N ++ A ++ +D + +PD+ TYN ++D L +AG + +
Sbjct: 174 PYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILG 233
Query: 67 IFHDLLIK-GYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+ + + + TY ++NG+ K FD L + ++M G P+ +++ ++I SL
Sbjct: 234 VLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSL 293
Query: 126 FENGENDKAEKLLLEM 141
+G ++ +L EM
Sbjct: 294 GRSGNVKESLRLFDEM 309
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +KG N+ T+N + L V+PD TYN+++ G A
Sbjct: 238 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 297
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
A+ ++ + KGY + Y MI+ LCK G FD A + + PN T E
Sbjct: 298 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 357
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
+++ L + G+ D+A K ++E++ +
Sbjct: 358 LLKGLVKKGQLDQA-KSIMELVHR 380
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+++N + + C+ +D G+ PD+ TY L+ L K R +++
Sbjct: 178 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 237
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEA---LALLSKMEIEGCTPNAITFESIIRSLFE 127
+++KG + T+ V I L +A L L+ K+++E P++IT+ +I+ F
Sbjct: 238 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVE---PDSITYNMVIKGFFL 294
Query: 128 NGENDKAEKLLLEMIDKG 145
D AE++ M KG
Sbjct: 295 ARFPDMAERVYTAMHGKG 312
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR-LKDAQEI 67
N+ NS+L L K+ +D G++PD+ TYN L+ G K A E+
Sbjct: 165 NVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIEL 224
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+L G + Y ++ G +EA + +M++EG +PN + S++ S
Sbjct: 225 IGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSW 284
Query: 128 NGENDKAEKLLLEMIDKGLL 147
G+ KA++L+ EM GL+
Sbjct: 285 KGDYKKADELMTEMKSIGLV 304
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N + +LL K D G + Y +LMDGL KAG+L++A
Sbjct: 302 GLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEA 361
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA--LALLSKMEIEGCTPNAITFESII 122
+ IF D+ KG + ++MI+ LC+ F EA L+ S+ E C + + +++
Sbjct: 362 RSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKC--DLVMLNTML 419
Query: 123 RSLFENGENDKAEKLLLEMIDKGL 146
+ GE + +++ +M ++ +
Sbjct: 420 CAYCRAGEMESVMRMMKKMDEQAV 443
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 64/141 (45%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N + Y L+D L K+ ++ +GV+ D +I++ LC++ R K+A
Sbjct: 337 GYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEA 396
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+E+ D + M+ C+ G + + ++ KM+ + +P+ TF +I+
Sbjct: 397 KELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKY 456
Query: 125 LFENGENDKAEKLLLEMIDKG 145
+ + A + L+M KG
Sbjct: 457 FIKEKLHLLAYQTTLDMHSKG 477
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY ++ +L KS +D ++ ++P ++ L+D + KAGRL + +++ ++
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM 374
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G+ + + +I+ K G D AL L +M+ G PN + II S ++G+
Sbjct: 375 QGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKL 434
Query: 132 DKAEKLLLEMIDKGLL 147
+ A + +M G L
Sbjct: 435 EVAMTVFKDMEKAGFL 450
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 63/137 (45%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + + SL+D+ K+ +D G +P+ Y ++++ K+G+L+ A
Sbjct: 378 GHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVA 437
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+F D+ G+ T TY+ ++ G D A+ + + M G P ++ S++
Sbjct: 438 MTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTL 497
Query: 125 LFENGENDKAEKLLLEM 141
L D A K+LLEM
Sbjct: 498 LANKRLVDVAGKILLEM 514
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
++SL+D++ K+ +D G +P + L+D KAG+L A ++ ++
Sbjct: 351 FSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMK 410
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
G+ YT++I K G + A+ + ME G P T+ ++ +G+ D
Sbjct: 411 KSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVD 470
Query: 133 KAEKLLLEMIDKGL 146
A K+ M + GL
Sbjct: 471 SAMKIYNSMTNAGL 484
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN ++ L K+ ++ + G + D TYN LM G A EI+ +
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
+ TY ++I L K G D A L +M+ P+ F S++ S+ + G D
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 133 KAEKLLLEM 141
+ K+ +EM
Sbjct: 366 TSMKVYMEM 374
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
D TY +++ L K+GRL A ++F + + + ++ +++ + K G D ++ +
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 104 SKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+M+ G P+A F S+I S + G+ D A +L EM G
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGF 414
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 57.0 bits (136), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G+ +I+Y +LL AL K D G++P+L Y + L +
Sbjct: 488 GEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLL 547
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ ++ KG +V T+ +I+G + GL A +M+ E PN IT+E +I +
Sbjct: 548 DTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEA 607
Query: 125 LFENGENDKAEKLLLEMIDKGL 146
L + + A +L ++ ++GL
Sbjct: 608 LANDAKPRLAYELHVKAQNEGL 629
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG +N++L A K+ D G +P + +Y L+ L K
Sbjct: 449 MEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKL 508
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A +++ ++ G ++ YT M + L + F+ LL +M +G P+ +TF +
Sbjct: 509 YDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNA 568
Query: 121 IIRSLFENG 129
+I NG
Sbjct: 569 VISGCARNG 577
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 53/109 (48%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
D+G++P +N ++ KA A +IF ++ G TV +Y +++ L K L+D
Sbjct: 451 DKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYD 510
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
EA + + M G PN + ++ L + + + LL EM KG+
Sbjct: 511 EAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 57.0 bits (136), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
QP TY L+ L K+G+ AQ++F ++L +G TV YT ++ + L D+A +
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 102 LLSKME-IEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
+L KM+ C P+ T+ +++++ + + D + L EM ++
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDER 224
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
+H + P ++ T N LL ++ V +G +P+ TY I +DG CK
Sbjct: 202 LHSRFNP-DVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRN 260
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+A +F D+ + ITV T +I+G +A L ++ G TP+ + +
Sbjct: 261 FGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNA 320
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ SL + G+ A K++ EM +KG+
Sbjct: 321 LMSSLMKCGDVSGAIKVMKEMEEKGI 346
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 60/130 (46%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + Y SL+ K ++ + +P + TY ++ G G++++A
Sbjct: 884 GTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEA 943
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
F ++ +G TY+ IN LC+ ++AL LLS+M +G P+ I F ++
Sbjct: 944 WNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYG 1003
Query: 125 LFENGENDKA 134
L G++D A
Sbjct: 1004 LNREGKHDLA 1013
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 58/129 (44%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G+P + TY ++ L K + + G++PD ++ G R+ +A
Sbjct: 428 GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEA 487
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
++F + KG T +Y++ + LC+ +DE + + ++M F +I S
Sbjct: 488 WKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISS 547
Query: 125 LFENGENDK 133
+ +NGE +K
Sbjct: 548 MEKNGEKEK 556
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 12 TYNSLLDALC--KSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFH 69
T+ L+ LC K +V+ G PD + LC+ G KDA+
Sbjct: 750 TFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLD 809
Query: 70 DLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
L G+ +TV Y++ I LC+ G +EAL+ L+ E E + T+ SI+ L + G
Sbjct: 810 SLGKIGFPVTV-AYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRG 868
Query: 130 ENDKA 134
+ KA
Sbjct: 869 DLQKA 873
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY S++ L + + + G +P + Y L+ K +L+ E +
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ +V TYT MI G G +EA ME G +P+ T+ I L + ++
Sbjct: 916 EGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKS 975
Query: 132 DKAEKLLLEMIDKGL 146
+ A KLL EM+DKG+
Sbjct: 976 EDALKLLSEMLDKGI 990
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
+ LL + C S + ++ + D + IL+ GLC+A R+ DA EI D++
Sbjct: 332 FGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV-DIM 390
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEND 132
+ + Y ++I+G ++ +AL ++ G P T+ I++ LF+ + +
Sbjct: 391 KRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFE 450
Query: 133 KAEKLLLEMIDKGL 146
K L EMI+ G+
Sbjct: 451 KGCNLFNEMIENGI 464
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 60/135 (44%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+ Y+ + ALC+ ++ + D TY ++ GL + G L+ A + +
Sbjct: 820 VAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNS 879
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ G VH YT +I KE ++ L KME E C P+ +T+ ++I G+
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 131 NDKAEKLLLEMIDKG 145
++A M ++G
Sbjct: 940 VEEAWNAFRNMEERG 954
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 59/108 (54%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
GVQPD+ T+NIL+ KAG K + + + + +T TY ++I K G ++
Sbjct: 316 GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKM 375
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
+ KM+ +G PN+IT+ S++ + + G K + +L ++++ ++
Sbjct: 376 DDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVV 423
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXD-QGVQPDLCTYNILMDGLCKAG 59
M +G I Y SL+ KS +D +PD+ T+ +L+ CK G
Sbjct: 170 MLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLG 229
Query: 60 RLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG-CTPNAITF 118
R + I ++ G + TY +I+G K G+F+E ++L+ M +G P+ T
Sbjct: 230 RFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTL 289
Query: 119 ESIIRSLFENGEN 131
SII S + NG N
Sbjct: 290 NSIIGS-YGNGRN 301
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
+TYN +++ K+ ++ QGV+P+ TY L++ KAG + +
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 416
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
++ + + +IN + G L +ME C P+ ITF ++I++ +G
Sbjct: 417 IVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGI 476
Query: 131 NDKAEKLLLEMIDKGLLEK 149
D ++L +MI + +K
Sbjct: 477 FDAVQELEKQMISSDIGKK 495
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 58/130 (44%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T+N L+ S ++ + G+ D Y L+ K+G++ E+FH +
Sbjct: 469 TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G +HT+ +I+G + G +A + + P+ + F ++I + ++G
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 132 DKAEKLLLEM 141
D+A +L EM
Sbjct: 589 DRAFDVLAEM 598
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQG--VQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+ +N+L+ A +S VD + + PD + LM C AG+++ A+E++
Sbjct: 573 VVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVY 632
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+ G T YT+ +N K G +D A ++ M+ + TP+ + F ++I
Sbjct: 633 QMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G A+ Y +L+ + KS VD + GV+ +L T+ L+DG +AG++ A
Sbjct: 497 GMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKA 556
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG--CTPNAITFESII 122
+ L K + +I+ + G D A +L++M+ E P+ I+ +++
Sbjct: 557 FGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALM 616
Query: 123 RSLFENGENDKAEKLLLEMIDK 144
++ G+ ++A K + +MI K
Sbjct: 617 KACCNAGQVERA-KEVYQMIHK 637
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
VK +P ++ N +L +LC+ + G + D T+ IL+ C G +K
Sbjct: 317 VKYEP-DVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIK 375
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
A +++ KGY V++Y +++GL ++GL+ +L +M+ G + TF+ ++
Sbjct: 376 RAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMV 435
Query: 123 RSLFENGENDKAEKLLLEMIDKGLLE 148
+ + ++A++++ +M GL+E
Sbjct: 436 TGYCKARQFEEAKRIVNKMFGYGLIE 461
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 65/138 (47%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
NI TY +L++A + + + G++PD+ YN LM+ +AG A EIF
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ G +Y +M++ + GL +A A+ +M+ G P + ++ + +
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 439
Query: 129 GENDKAEKLLLEMIDKGL 146
+ K E ++ EM + G+
Sbjct: 440 RDVTKCEAIVKEMSENGV 457
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 65/137 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ YN+L+++ ++ + G +PD +YNI++D +AG DA
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 410
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ +F ++ G T+ ++ ++++ K + A++ +M G P+ S++
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
Query: 125 LFENGENDKAEKLLLEM 141
G+ K EK+L EM
Sbjct: 471 YGRLGQFTKMEKILAEM 487
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 58/135 (42%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN +++ K+ +P++CTY L++ + G + A+EIF L
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G V+ Y ++ + G A + S M+ GC P+ ++ ++ + G +
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 132 DKAEKLLLEMIDKGL 146
AE + EM G+
Sbjct: 408 SDAEAVFEEMKRLGI 422
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPD---LCTYNILMDGLCK-AGRLKDAQEI 67
TY L+ A C + ++ + V P + YN ++GL K G ++A ++
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F + T TY +MIN K + L +M C PN T+ +++ +
Sbjct: 274 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 333
Query: 128 NGENDKAEKLLLEMIDKGL 146
G +KAE++ ++ + GL
Sbjct: 334 EGLCEKAEEIFEQLQEDGL 352
Score = 46.2 bits (108), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
QPD+ +N+L+D + + K+A+ ++ LL Y T TY ++I C GL + A
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 102 LLSKMEIEGCTPNAI 116
+L +M+ +P I
Sbjct: 234 VLVEMQNHHVSPKTI 248
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 56.2 bits (134), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 65/138 (47%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
NI TY +L++A + + + G++PD+ YN LM+ +AG A EIF
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ G +Y +M++ + GL +A A+ +M+ G P + ++ + +
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 129 GENDKAEKLLLEMIDKGL 146
+ K E ++ EM + G+
Sbjct: 418 RDVTKCEAIVKEMSENGV 435
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 65/137 (47%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ YN+L+++ ++ + G +PD +YNI++D +AG DA
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+ +F ++ G T+ ++ ++++ K + A++ +M G P+ S++
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 125 LFENGENDKAEKLLLEM 141
G+ K EK+L EM
Sbjct: 449 YGRLGQFTKMEKILAEM 465
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 58/135 (42%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN +++ K+ +P++CTY L++ + G + A+EIF L
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
G V+ Y ++ + G A + S M+ GC P+ ++ ++ + G +
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 132 DKAEKLLLEMIDKGL 146
AE + EM G+
Sbjct: 386 SDAEAVFEEMKRLGI 400
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPD---LCTYNILMDGLCK-AGRLKDAQEI 67
TY L+ A C + ++ + V P + YN ++GL K G ++A ++
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 68 FHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
F + T TY +MIN K + L +M C PN T+ +++ +
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 311
Query: 128 NGENDKAEKLLLEMIDKGL 146
G +KAE++ ++ + GL
Sbjct: 312 EGLCEKAEEIFEQLQEDGL 330
Score = 46.2 bits (108), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
QPD+ +N+L+D + + K+A+ ++ LL Y T TY ++I C GL + A
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 102 LLSKMEIEGCTPNAI 116
+L +M+ +P I
Sbjct: 212 VLVEMQNHHVSPKTI 226
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 47 TYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVH------TYTVMINGLCKEGLFDEAL 100
YN +++ L + G+ +A ++F D + K ++ H T+ VM+NG C G F+EA+
Sbjct: 312 AYNYVLEALSENGKFDEALKLF-DAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAM 370
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+ +M C+P+ ++F +++ L +N +AEKL EM +K +
Sbjct: 371 EVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNV 416
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY L+D K +D + ++P+L YN L D L KAG+L DA+ F D+
Sbjct: 422 TYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DM 480
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM 106
++ + Y ++ L + G DE L ++ +M
Sbjct: 481 MVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQP-----DLCTYNILMDGLCKAGRLKDAQ 65
+ YN +L+AL ++ D + P +L T+N++++G C G+ ++A
Sbjct: 311 MAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAM 370
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
E+F + ++ ++N LC L EA L +ME + P+ T+ ++ +
Sbjct: 371 EVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTC 430
Query: 126 FENGENDKAEKLLLEMIDKGLLEKL 150
F+ G+ D+ M++ L L
Sbjct: 431 FKEGKIDEGAAYYKTMVESNLRPNL 455
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ T+N +++ C + D PD ++N LM+ LC L +A++++
Sbjct: 349 NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
++ K +TY ++++ KEG DE A M PN + + L +
Sbjct: 409 GEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKA 468
Query: 129 GENDKAEKLLLEMIDK 144
G+ D A+ M+ K
Sbjct: 469 GKLDDAKSFFDMMVSK 484
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
+ I N L+ LC+ + D QG PD +Y ILM G C G+L++A +
Sbjct: 150 SRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHL 209
Query: 68 FHDLLI----KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+ + KG + Y ++++ LC G D+A+ +L K+ +G + I
Sbjct: 210 LYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEA 269
Query: 124 SLFENGEN--DKAEKLLLEMIDKGLL 147
+E+ ++ ++LL E + +G +
Sbjct: 270 GHWESSSEGIERVKRLLTETLIRGAI 295
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 47 TYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM 106
TY L+DGLC+ G+ +A ++ ++LIK + V TY +MI GLC EA+ L +M
Sbjct: 407 TYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM 466
Query: 107 EIEGCTPNAITFESIIRSL 125
+ P + ++++ S+
Sbjct: 467 VSQDMVPESSVWKALAESV 485
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQG-VQPDLCTYNILMDGLCKAG 59
M KG Y + + ALC++ + QG P + YN+L+ GLC G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 60 RLKDAQEIFHDLLIKGYHIT-VHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF 118
+ +A + + + TY +++GLC++G F EA ++ +M I+ P T+
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDKGLL 147
+I+ L + +A L EM+ + ++
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
V + N+LM LC+ R A ++F ++ +G + +Y +++ G C EG +EA
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 101 ALLSKM----EIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
LL M +G + + + ++ +L + GE D A ++L +++ KGL
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGL 257
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 38/176 (21%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQ--------------------- 42
KG +I+ Y LLDALC + VD +G++
Sbjct: 220 KGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGI 279
Query: 43 ----------------PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVM 86
P L +Y+ + L + G+L + +E+ + KG+ T Y
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAK 339
Query: 87 INGLCKEGLFDEALALLSKMEIEG-CTPNAITFESIIRSLFENGENDKAEKLLLEM 141
+ LC+ G EA+++++K ++G C P + +I+ L ++G++ +A L +M
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 8 ANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEI 67
+ I N L+ LC+ + D QG PD +Y ILM G C G+L++A +
Sbjct: 150 SRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHL 209
Query: 68 FHDLLI----KGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
+ + KG + Y ++++ LC G D+A+ +L K+ +G + I
Sbjct: 210 LYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEA 269
Query: 124 SLFENGEN--DKAEKLLLEMIDKGLL 147
+E+ ++ ++LL E + +G +
Sbjct: 270 GHWESSSEGIERVKRLLTETLIRGAI 295
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 47 TYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM 106
TY L+DGLC+ G+ +A ++ ++LIK + V TY +MI GLC EA+ L +M
Sbjct: 407 TYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM 466
Query: 107 EIEGCTPNAITFESIIRSL 125
+ P + ++++ S+
Sbjct: 467 VSQDMVPESSVWKALAESV 485
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQG-VQPDLCTYNILMDGLCKAG 59
M KG Y + + ALC++ + QG P + YN+L+ GLC G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 60 RLKDAQEIFHDLLIKGYHIT-VHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF 118
+ +A + + + TY +++GLC++G F EA ++ +M I+ P T+
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDKGLL 147
+I+ L + +A L EM+ + ++
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
V + N+LM LC+ R A ++F ++ +G + +Y +++ G C EG +EA
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 101 ALLSKM----EIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
LL M +G + + + ++ +L + GE D A ++L +++ KGL
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGL 257
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 38/176 (21%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQ--------------------- 42
KG +I+ Y LLDALC + VD +G++
Sbjct: 220 KGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGI 279
Query: 43 ----------------PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVM 86
P L +Y+ + L + G+L + +E+ + KG+ T Y
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAK 339
Query: 87 INGLCKEGLFDEALALLSKMEIEG-CTPNAITFESIIRSLFENGENDKAEKLLLEM 141
+ LC+ G EA+++++K ++G C P + +I+ L ++G++ +A L +M
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 20/151 (13%)
Query: 5 GQPANIITYNSLLDALCK------SHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKA 58
G +++T N+L+D K +H V D+ + D+ ++N L+ G +
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKV----------FDEMYERDVISWNSLLSGYARL 188
Query: 59 GRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITF 118
G++K A+ +FH +L K T+ ++T MI+G G + EA+ +M++ G P+ I+
Sbjct: 189 GQMKKAKGLFHLMLDK----TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISL 244
Query: 119 ESIIRSLFENGENDKAEKLLLEMIDKGLLEK 149
S++ S + G + + + L +G L++
Sbjct: 245 ISVLPSCAQLGSLELGKWIHLYAERRGFLKQ 275
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 67/143 (46%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G N YNS + + + ++ + V+ D T+ IL+ G C+ + +
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A ++ +T Y+ ++ K+G EA ++ ++M++ GC P+ I + S++
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 608
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ + + KA +L LEM G+
Sbjct: 609 AYNASEKWGKACELFLEMEANGI 631
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN+L++A S + D GV PDL T+NI++ K+GR + ++ + +
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGR-QYSKALSYFE 272
Query: 72 LIKGYHI--TVHTYTVMINGLCKEGLFDEALALLSKMEIE--GCTPNAITFESIIRSLFE 127
L+KG + T+ ++I L K G +AL L + M + C P+ +TF SI+
Sbjct: 273 LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSV 332
Query: 128 NGENDKAEKLLLEMIDKGL 146
GE + + M+ +GL
Sbjct: 333 KGEIENCRAVFEAMVAEGL 351
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 53/117 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G NI++YN+L+ A G+ PD+ +Y L++ ++ +
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAIT 117
A+E+F + + V TY +I+ G EA+ + +ME +G PN ++
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 67/143 (46%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G N YNS + + + ++ + V+ D T+ IL+ G C+ + +
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A ++ +T Y+ ++ K+G EA ++ ++M++ GC P+ I + S++
Sbjct: 417 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 476
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ + + KA +L LEM G+
Sbjct: 477 AYNASEKWGKACELFLEMEANGI 499
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN+L++A S + D GV PDL T+NI++ K+GR + ++ + +
Sbjct: 83 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGR-QYSKALSYFE 140
Query: 72 LIKGYHI--TVHTYTVMINGLCKEGLFDEALALLSKMEIE--GCTPNAITFESIIRSLFE 127
L+KG + T+ ++I L K G +AL L + M + C P+ +TF SI+
Sbjct: 141 LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSV 200
Query: 128 NGENDKAEKLLLEMIDKGL 146
GE + + M+ +GL
Sbjct: 201 KGEIENCRAVFEAMVAEGL 219
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 53/117 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G NI++YN+L+ A G+ PD+ +Y L++ ++ +
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAIT 117
A+E+F + + V TY +I+ G EA+ + +ME +G PN ++
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 330
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G + N ++ A K VD G +P+ TY+ L+ G+C+ GR
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ + ++ +KG Y V+I L E DEA+ ++ M +P+ +T+ +
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 121 IIRSLFENGENDKAEKLLLEMIDK 144
++ L G +A LEM+++
Sbjct: 334 VLTELCRGGRGSEA----LEMVEE 353
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
GV PD N+++ K + +A +F ++ + G +TY+ ++ G+C++G
Sbjct: 216 SNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVG 275
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
+ L +M+++G PN + +I SL D+A +++ +M+ L
Sbjct: 276 QGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSL 324
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M G ++ YN+LLDA K ++ PD TYNI+++ + G
Sbjct: 759 MQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGW 818
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ + ++ +L G + +Y +I G+ +EA+ L+ +M P+ +T+ +
Sbjct: 819 IDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTN 878
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
++ +L N E +A K L M G+
Sbjct: 879 LVTALRRNDEFLEAIKWSLWMKQMGI 904
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G + TYN ++ LCK ++P+ TY++L+ G C L +A
Sbjct: 247 GVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEA 306
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+F ++ GY Y +I+ LCK G F+ AL L + + P+ + ++
Sbjct: 307 MNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNG 366
Query: 125 LFENGENDKAEKLL 138
L + D+A++L+
Sbjct: 367 LASRSKVDEAKELI 380
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G ++ TYN ++ LC+S + ++P ++ +++DG K + +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRS 124
+++ + G H+ V TY +MI LCK EA AL+ + PN++T+ +I
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 125 LFENGENDKAEKLLLEMIDKG 145
D+A L M+ G
Sbjct: 297 FCSEENLDEAMNLFEVMVCNG 317
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
D Y+I++ K G L A+++F ++L +G+ YTV + C++G EA LL
Sbjct: 303 DTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLL 362
Query: 104 SKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
S+ME G +P TF +I G +K + M+ +GL+
Sbjct: 363 SEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 66/142 (46%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G + +N ++ ++ K +V+ D+G PD TY+ L+ G +
Sbjct: 400 MVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGND 459
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ A ++F+++ + + +I GLC G + L M+ PNA +++
Sbjct: 460 IDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDA 519
Query: 121 IIRSLFENGENDKAEKLLLEMI 142
+I++ + G+ A+++ EMI
Sbjct: 520 LIKAFQKIGDKTNADRVYNEMI 541
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 58/141 (41%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M +G AN Y + C+ V + GV P T+N L+ G + G
Sbjct: 330 MLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGW 389
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ E ++ +G + + M+ + K + A +L+K +G P+ T+
Sbjct: 390 EEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSH 449
Query: 121 IIRSLFENGENDKAEKLLLEM 141
+IR E + D+A KL EM
Sbjct: 450 LIRGFIEGNDIDQALKLFYEM 470
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 68/138 (49%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
++IT N+L+ KS D D+ + P+ T I++ LCK GRLK+ ++
Sbjct: 198 SVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLL 257
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ K +V T ++ + +E +E+++LL ++ ++ + I + ++ + +
Sbjct: 258 DRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKE 317
Query: 129 GENDKAEKLLLEMIDKGL 146
G+ A K+ EM+ +G
Sbjct: 318 GDLVSARKVFDEMLQRGF 335
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN +L +L +++ D G D+ TYNI++D K A + +
Sbjct: 555 TYNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMM 614
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ G+ T+T ++ L + F+EAL LL + +E + +++ +I+R FE G
Sbjct: 615 IRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMI 674
Query: 132 DKAEKLLLEM 141
D E ++ +M
Sbjct: 675 DVIEYIVEQM 684
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN +L +L +++ D G D+ TYNI++D K A + +
Sbjct: 527 TYNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMM 586
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
+ G+ T+T ++ L + F+EAL LL + +E + +++ +I+R FE G
Sbjct: 587 IRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMI 646
Query: 132 DKAEKLLLEM 141
D E ++ +M
Sbjct: 647 DVIEYIVEQM 656
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TY+ +L +L + + ++ + V D+ YN + C G L+ A E+ +
Sbjct: 144 TYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKI 203
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENG 129
G +Y ++ G C+ G + A+A+L +ME +G T T +I L E G
Sbjct: 204 EEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGG 261
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%)
Query: 3 VKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLK 62
++G + YNS++ L K +++D +GV P+ T N + CKAG +
Sbjct: 350 LEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVD 409
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+A E++ G+ T +Y +I+ LC ++A +L G TF ++
Sbjct: 410 EALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLT 469
Query: 123 RSLFENGENDKAEKLLLEMIDKGLLEK 149
+L G+ D A +L++ ++ LL K
Sbjct: 470 NALCWKGKPDMARELVIAAAERDLLPK 496
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 58/134 (43%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M V+G N T N+ L CK+ VD + G P +YN L+ LC
Sbjct: 383 MMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANES 442
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A ++ + +G+ + T++ + N LC +G D A L+ P I
Sbjct: 443 VEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCK 502
Query: 121 IIRSLFENGENDKA 134
II +L + G+ + A
Sbjct: 503 IISALCDVGKVEDA 516
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G+ P + + +++ K ++ DA FHDL +G Y VMI GLCK D+A
Sbjct: 633 GITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDA 691
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKG 145
+ L +M+ EG P+ +E I+ L + D+A L+ E G
Sbjct: 692 MHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSG 737
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 56/110 (50%)
Query: 38 DQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFD 97
D ++PDL YN +++ + K +F +L G TY + + + + G FD
Sbjct: 334 DPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFD 393
Query: 98 EALALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGLL 147
KM+ G P AIT++ ++R+L+ G+ ++A + + +M KG++
Sbjct: 394 RVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVI 443
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N TY ++ + +S D G P TY +L+ L + G++++A
Sbjct: 371 GLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEA 430
Query: 65 QEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKME-IEGCTPNAITFESIIR 123
E D+ KG T Y + LC G + +A+ + +M+ +E C P ITF +I
Sbjct: 431 VEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIA 490
Query: 124 SLFENGENDKAEKLLLEMIDK 144
+ G D + M DK
Sbjct: 491 ASLNGGHVDDCMAIFQYMKDK 511
Score = 46.2 bits (108), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 53/121 (43%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+++ YN++L+A + G++P+ TY + M+ + ++G+ + F
Sbjct: 340 DLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFF 399
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ G TY V++ L +EG +EA+ + ME +G + + L N
Sbjct: 400 RKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNN 459
Query: 129 G 129
G
Sbjct: 460 G 460
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ T+N+LL L H G +P+L T+ ++ C G + + + F
Sbjct: 371 NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYF 430
Query: 69 HDLLIKGYHI--TVHTYTVMINGLCKEGLFDEALALLSKMEIE 109
H + + Y++ + Y MI+ LC+ GL DEAL L+ M ++
Sbjct: 431 HKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVK 473
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T NS L A + ++ G++P++ T+NIL+D K+G K + +
Sbjct: 294 TMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYM 353
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
Y T+ TY V+I+ + G + L M+ E P+ +T S++R+ G
Sbjct: 354 QKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY---GRA 410
Query: 132 DKAEKL 137
KA+K+
Sbjct: 411 SKADKI 416
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 42 QPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALA 101
+P++ Y L+ L K + + A E+F +++ +G + YT +++ + G FD A
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206
Query: 102 LLSKME-IEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
LL +M+ C P+ T+ +I+S + DK + LL +M +G+
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQ--GVQPDLCTYNILMDGLCKAGRLK 62
G P + +++N+LL+A S + D + + PD +Y IL+ C +G +
Sbjct: 132 GTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPE 191
Query: 63 DAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
A EI + KG +T +T +++ L K+G + A L ++M +GC + + I
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI 251
Query: 123 RSLFENGENDKAEKLLLEMIDKGL 146
S + ++ ++L+ EM GL
Sbjct: 252 MSA-QKESPERVKELIEEMSSMGL 274
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M KG I + ++L +L K ++ +G + D YN+ + K
Sbjct: 200 MQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP 259
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +E+ ++ G +Y ++ C+ G+ DEA + +E C PNA TF +
Sbjct: 260 ER-VKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRT 318
Query: 121 II-----RSLFENG 129
+I L+E G
Sbjct: 319 LIFHLCYSRLYEQG 332
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 52.8 bits (125), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 47 TYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM 106
TYN ++D K+G++K+A E F +L +G T T+ MI+ G E +L+ M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 107 EIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
++ C P+ T+ +I +N + ++A EM D GL
Sbjct: 360 KLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGL 398
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M K N++TYN+++ K+ + +G++P+ TY+ ++ KAG+
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 450
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
L A +F L G I Y MI + GL A LL ++++ P+ I E+
Sbjct: 451 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL----PDNIPRET 506
Query: 121 IIRSLFENGENDKAEKLLLEMIDKG 145
I L + G ++A + + + G
Sbjct: 507 AITILAKAGRTEEATWVFRQAFESG 531
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 67/146 (45%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M+ G N ++Y++LL ++H + DL T NI++D +
Sbjct: 286 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM 345
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+K+A +F L V +Y ++ + LF EA+ L M+ + N +T+ +
Sbjct: 346 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I+ + E++KA L+ EM +G+
Sbjct: 406 MIKIYGKTMEHEKATNLVQEMQSRGI 431
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
++P++ +YN ++ +A +A +F + K V TY MI K ++A
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
L+ +M+ G PNAIT+ +II + G+ D+A L ++ G+
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++++N+++D +S +D D+ + ++ ++N ++ L + GR+ +A +F
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELF----DEMPERNIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTP--NAITFESIIRSLF 126
+ + V ++T M++GL K G DEA L C P N I++ ++I
Sbjct: 195 ERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFD------CMPERNIISWNAMITGYA 244
Query: 127 ENGENDKAEKLLLEMIDK 144
+N D+A++L M ++
Sbjct: 245 QNNRIDEADQLFQVMPER 262
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG P + +TYNSL+ V +QPD+ +Y +L+ +A R ++
Sbjct: 276 KGVPQSTVTYNSLMSFETSYKEVSKIYDQMQR---SDIQPDVVSYALLIKAYGRARREEE 332
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +F ++L G T Y ++++ G+ ++A + M + P+ ++ +++
Sbjct: 333 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 392
Query: 124 SLFENGENDKAEKLL 138
+ + + AEK
Sbjct: 393 AYVNASDMEGAEKFF 407
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP ++++Y L+ A ++ + D GV+P YNIL+D +G ++ A+
Sbjct: 311 QP-DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+F + + +YT M++ + A +++++G PN +T+ ++I+
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 126 FENGENDKAEKLLLEMIDKGL 146
+ + +K ++ +M G+
Sbjct: 430 AKANDVEKMMEVYEKMRLSGI 450
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 47/110 (42%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN LLDA S V+ + PDL +Y ++ A ++ A++ F +
Sbjct: 352 YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 411
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+ G+ + TY +I G K ++ + + KM + G N +I+
Sbjct: 412 VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 461
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 17/128 (13%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+I+Y +L+++ + + G +P TY I++ + + K+A
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 65 QEIFHDLL----------IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPN 114
+E+F LL K YH+ ++ Y K G +++A + S M +G +
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYK-------KAGNYEKARKVFSSMVGKGVPQS 281
Query: 115 AITFESII 122
+T+ S++
Sbjct: 282 TVTYNSLM 289
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG P + +TYNSL+ V +QPD+ +Y +L+ +A R ++
Sbjct: 283 KGVPQSTVTYNSLMSFETSYKEVSKIYDQMQR---SDIQPDVVSYALLIKAYGRARREEE 339
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +F ++L G T Y ++++ G+ ++A + M + P+ ++ +++
Sbjct: 340 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 399
Query: 124 SLFENGENDKAEKLL 138
+ + + AEK
Sbjct: 400 AYVNASDMEGAEKFF 414
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
QP ++++Y L+ A ++ + D GV+P YNIL+D +G ++ A+
Sbjct: 318 QP-DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 376
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
+F + + +YT M++ + A +++++G PN +T+ ++I+
Sbjct: 377 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 436
Query: 126 FENGENDKAEKLLLEMIDKGL 146
+ + +K ++ +M G+
Sbjct: 437 AKANDVEKMMEVYEKMRLSGI 457
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 47/110 (42%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLL 72
YN LLDA S V+ + PDL +Y ++ A ++ A++ F +
Sbjct: 359 YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 418
Query: 73 IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESII 122
+ G+ + TY +I G K ++ + + KM + G N +I+
Sbjct: 419 VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 468
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 17/128 (13%)
Query: 5 GQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDA 64
G N+I+Y +L+++ + + G +P TY I++ + + K+A
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 65 QEIFHDLL----------IKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPN 114
+E+F LL K YH+ ++ Y K G +++A + S M +G +
Sbjct: 236 EEVFETLLDEKKSPLKPDQKMYHMMIYMYK-------KAGNYEKARKVFSSMVGKGVPQS 288
Query: 115 AITFESII 122
+T+ S++
Sbjct: 289 TVTYNSLM 296
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 51 LMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEG 110
L+D K G L+ A +F +L K + + +I GL G EAL + +KME+E
Sbjct: 1073 LVDMYSKCGSLERALLVFFNLPKK----NLFCWNSIIEGLAAHGFAQEALKMFAKMEMES 1128
Query: 111 CTPNAITFESIIRSLFENGENDKAEKLLLEMID 143
PNA+TF S+ + G D+ ++ MID
Sbjct: 1129 VKPNAVTFVSVFTACTHAGLVDEGRRIYRSMID 1161
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
DL N L+D CK G L+DA +F+ + + V T++ MI+GL + G EAL L
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKERD----VITWSTMISGLAQNGYSQEALKLF 347
Query: 104 SKMEIEGCTPNAITFESII 122
+M+ G PN IT ++
Sbjct: 348 ERMKSSGTKPNYITIVGVL 366
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
D+ ++ ++ G CK G +++A+E+F ++ H + T+++MING K F++A+ L
Sbjct: 182 DVVSWTSMVAGYCKCGMVENAREMFDEMP----HRNLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 104 SKMEIEGCTPNAITFESIIRS 124
M+ EG N S+I S
Sbjct: 238 EFMKREGVVANETVMVSVISS 258
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 6 QPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQ 65
+ AN Y+++L A + + ++ D+ N ++D K GRL +A
Sbjct: 103 EAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEAN 162
Query: 66 EIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL 125
F ++L + ++ +I+G CK GL DEA+ L +M PN +++ +I
Sbjct: 163 SSFKEIL----RPSSTSWNTLISGYCKAGLMDEAVTLFHRMP----QPNVVSWNCLISGF 214
Query: 126 FENGENDKAEKLLLEMIDKGLL 147
+ G + +A + L+ M +GL+
Sbjct: 215 VDKG-SPRALEFLVRMQREGLV 235
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
NI NSL++ SH + V D+ +YNIL+ C AGR+ AQ+I+
Sbjct: 301 NIYVINSLMNV--NSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIY 358
Query: 69 HDL-------LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESI 121
+ L+K + TY +I ++ AL + M+ G TPN T+ S+
Sbjct: 359 KEAKRMESSGLLK---LDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSL 415
Query: 122 IRSLFENGENDKAEKLLLEMIDKG 145
I + G ++A L EM+ G
Sbjct: 416 ISACANAGLVEQANHLFEEMLASG 439
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 65/146 (44%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
MH G P +I TYN+++ + +D G+ D Y ++ K G+
Sbjct: 800 MHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGK 859
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
+ +A +F ++ KG +Y +M+ L E LL ME G + T+ +
Sbjct: 860 MSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLT 919
Query: 121 IIRSLFENGENDKAEKLLLEMIDKGL 146
+I+ E+ + +AEK + + +KG+
Sbjct: 920 LIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 63/137 (45%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
+ + YN+L+ A+ ++ + GV + TYN ++ + +L A EIF
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIF 832
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ G ++ YT MI K G EAL+L S+M+ +G P ++ +++ +
Sbjct: 833 SNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATS 892
Query: 129 GENDKAEKLLLEMIDKG 145
+ + ++LL M G
Sbjct: 893 RLHHEVDELLQAMERNG 909
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 63/143 (44%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
KG +T + L++AL ++ ++ D YN L+ + +AG+L+
Sbjct: 733 KGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQC 792
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A EI+ + G ++ TY MI+ + D+A+ + S G + + ++I
Sbjct: 793 ASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIM 852
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
+ G+ +A L EM KG+
Sbjct: 853 HYGKGGKMSEALSLFSEMQKKGI 875
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 13 YNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCK-------AGRLKDAQ 65
Y SLL +V G+ PDL +N L+ LC+ +G + +A
Sbjct: 211 YRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEAL 270
Query: 66 EIFHDLLIKGYHI--TVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
I L ++ Y I T +Y ++++ L + E+ +L +M+ GC P+ ++ ++R
Sbjct: 271 NIM--LEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVR 328
Query: 124 SLFENGENDKAEKLLLEMIDKGL 146
L+ G K +++ EMI++G
Sbjct: 329 VLYLTGRFGKGNQIVDEMIERGF 351
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 41 VQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEAL 100
++ D+ N L+D K+G ++DA F ++ K V ++T +I G + G F++A+
Sbjct: 348 IRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEK----DVRSWTSLIAGYGRHGNFEKAI 403
Query: 101 ALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDK 144
L ++ME E PN +TF S++ + G+ + K+ MI+K
Sbjct: 404 DLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINK 447
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N+ T N ++ LCK V+ + ++PD TY ++ G C G L +A +++
Sbjct: 180 NVETMNRGVETLCKEKLVEEAKFVFIKL-KEFIKPDEITYRTMIQGFCDVGDLIEAAKLW 238
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM-EIEGCTPNAITFESIIRSLFE 127
+ ++ +G+ + + ++ L K+ FDEA + M G + + +I L +
Sbjct: 239 NLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCK 298
Query: 128 NGENDKAEKLLLEMIDKGL 146
NG D A K+ EM ++G+
Sbjct: 299 NGRIDMARKVFDEMRERGV 317
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
T N +L + S ++D +G+ D T+ I++ L A LK FH +
Sbjct: 114 TSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDK-TFRIVLKTLASARELKKCVNYFHLM 172
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGEN 131
GY V T + LCKE L +EA + K++ E P+ IT+ ++I+ + G+
Sbjct: 173 NGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLK-EFIKPDEITYRTMIQGFCDVGDL 231
Query: 132 DKAEKLLLEMIDKGL 146
+A KL M+D+G
Sbjct: 232 IEAAKLWNLMMDEGF 246
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +T S+L A + VD Q + ++ + L+D KAG +K A+++F
Sbjct: 520 NAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMF 579
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
+ TYT MI G + G+ + A++L M+ G P+AITF +++ + +
Sbjct: 580 SQTKER----NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYS 635
Query: 129 GENDKAEKLLLEM 141
G D+ K+ EM
Sbjct: 636 GLIDEGLKIFEEM 648
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 1 MHVKGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGR 60
M ++G N + S+L A + +D ++ + L+D K G
Sbjct: 231 MQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD 290
Query: 61 LKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFES 120
++ A E+F + K V+T++ +NGL G ++ L L S M+ +G TPNA+TF S
Sbjct: 291 MEKAMEVFWGMEEK----NVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVS 346
Query: 121 IIRSLFENGENDKAEK 136
++R G D+ ++
Sbjct: 347 VLRGCSVVGFVDEGQR 362
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 43 PDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALAL 102
PDL N L+ K G ++DA EIF ++ K TV ++ MI GL GL D+AL L
Sbjct: 501 PDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD---TV-SWNSMIMGLSHHGLADKALNL 556
Query: 103 LSKMEIEGCTPNAITFESIIRSLFENG 129
+M G PN++TF ++ + +G
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSG 583
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
Query: 4 KGQPANIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKD 63
+G ++ + SLL K+ ++D ++ ++ T N ++ G K R+ +
Sbjct: 71 RGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLTGYVKCRRMNE 126
Query: 64 AQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIR 123
A +F ++ V ++TVM+ LC +G ++A+ L +M N +++ +++
Sbjct: 127 AWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMP----ERNVVSWNTLVT 177
Query: 124 SLFENGENDKAEKLLLEM 141
L NG+ +KA+++ M
Sbjct: 178 GLIRNGDMEKAKQVFDAM 195
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 49 NILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEI 108
N L+D K G + +A++IF + K TV T+T MI G G+F EAL L SKM
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEK----TVVTWTTMIAGYALNGIFLEALKLFSKMID 452
Query: 109 EGCTPNAITFESIIRSLFENGENDKA 134
PN ITF +++++ +G +K
Sbjct: 453 LDYKPNHITFLAVLQACAHSGSLEKG 478
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 40 GVQPDLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEA 99
G D+ L+D K KD +++F ++ + V T+T +I+G + + DE
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMNDEV 178
Query: 100 LALLSKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEMIDKGL 146
L L +M+ EG PN+ TF + + L E G + ++ ++ GL
Sbjct: 179 LTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++ YN+LL+A+ ++ + G+ P+ T L+ KA +DA +++
Sbjct: 325 NVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLW 384
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKM-EIEGCTPNAITFESIIRSLFE 127
++ K + + Y ++N GL +EA L + M E C P+ ++ +++
Sbjct: 385 EEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGS 444
Query: 128 NGENDKAEKLLLEMIDKGL 146
G+ +KA +L EM+ G+
Sbjct: 445 GGKAEKAMELFEEMLKAGV 463
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 64/136 (47%)
Query: 11 ITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHD 70
ITY++++ + + + G+ PD TY+ ++D K+G++++ ++
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 71 LLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFENGE 130
+ G+ ++V+ + G +D +L +M+ PN + + +++ ++ G+
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 131 NDKAEKLLLEMIDKGL 146
A L EM++ GL
Sbjct: 342 PGLARSLFNEMLEAGL 357
>AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28618365-28622581 REVERSE
LENGTH=693
Length = 693
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 12 TYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIFHDL 71
TYN +L +L +++ D G D+ TYNI++D K A + +
Sbjct: 559 TYNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMM 618
Query: 72 LIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFE 127
+ G+ T+T ++ L + F+EAL LL + +E + +++ +I+R FE
Sbjct: 619 IRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFE 674
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N++T+N+L L H + V+PD T+ ++ +G + + F
Sbjct: 316 NVVTWNALFSGLAM-HGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCF 374
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSLFEN 128
H L G V Y M++ L + GL +EA L+ +M + PN + S++ S +
Sbjct: 375 HSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPV---PPNEVVLGSLLGSCSVH 431
Query: 129 GENDKAEKLLLEMI 142
G+ + AE++ E+I
Sbjct: 432 GKVEIAERIKRELI 445
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 49.7 bits (117), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 9 NIITYNSLLDALCKSHHVDXXXXXXXXXXDQGVQPDLCTYNILMDGLCKAGRLKDAQEIF 68
N +T++ +L +D GV + N L+ K GR DA ++F
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLF 297
Query: 69 HDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAITFESIIRSL--F 126
++ + +T + MI+G + GL +E+L +M G P+AITF S++ S+ F
Sbjct: 298 R-MMSRADTVT---WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 127 ENGE 130
EN E
Sbjct: 354 ENLE 357
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 50/94 (53%)
Query: 57 KAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEIEGCTPNAI 116
K ++KDA+ +F +L + ++ + Y+V++ + E L+ +M GC A+
Sbjct: 410 KIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGAL 469
Query: 117 TFESIIRSLFENGENDKAEKLLLEMIDKGLLEKL 150
T++++I+ E GE +KAE L + I ++ L
Sbjct: 470 TWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPL 503
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 44 DLCTYNILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALL 103
D+ YN +MDG K+G + A+ +F ++ H TV T+T MI+G C D A L
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMT----HKTVITWTTMIHGYCNIKDIDAARKLF 230
Query: 104 SKMEIEGCTPNAITFESIIRSLFENGENDKAEKLLLEM 141
M N +++ ++I +N + + +L EM
Sbjct: 231 DAMP----ERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 49 NILMDGLCKAGRLKDAQEIFHDLLIKGYHITVHTYTVMINGLCKEGLFDEALALLSKMEI 108
N L+D K G L A+ +F ++ + +V +YT MI G +EGL EA+ L +ME
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDR----SVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 109 EGCTPNAITFESII 122
EG +P+ T +++
Sbjct: 391 EGISPDVYTVTAVL 404